ERC000024
ENA-CHECKLIST
Ifremer
INSDC center name
ERS27091196
SRA accession
sam_vibram_10-17-Ba-W-J2-9
Submitter Id
mediterranean sea biome [ENVO:01000047]
broad-scale environmental context
SeBiMER
broker name
2017-10-11
collection date
seawater metagenome
common name
1
m
depth
coastal sea water [ENVO:00002150]
environmental medium
Water
environmental package
Yes
environmental_sample
France
geographic location (country and/or sea)
not applicable
m
geographic location (elevation)
42.488333
DD
geographic location (latitude)
3.145
DD
geographic location (longitude)
Banyuls-sur-Mer, SOLA site
geographic location (region and locality)
metagenome
investigation type
Surface water (1 meter depth) was collected using a hydrobios bottle and then filtered on a 5m filter to recover most protists
isolation_source
coast [ENVO:01000687]
local environmental context
seawater metagenome
organism
vibram
project name
GSC_MIxS_water
sample_checklist_description
18S rRNA (v4 loop) of protist metagenome from surface sea water collected in October of 2017, near the marine protected area of Banyuls-sur-Mer at SOLA station, enriched by culturing on bacterial layers (Vibrio crassostreae J2-9) on agar plates for 2 weeks
sample_description
10-17-Ba-W-J2-9
sample_name
seawater metagenome
scientific_name
18S rRNA
target gene
V4
target subfragment
18S V4 rRNA, Culturable protist diversity, from surface sea water collected in October, 2017, at Banyuls-sur-Mer, and enriched on a Vibrio crassostreae J2-9 lawn
title