ERC000021
ENA-CHECKLIST
Ifremer
INSDC center name
ERS27073979
SRA accession
sam_vibram_03-17-Se-S-E-coli
Submitter Id
mediterranean sea biome [ENVO:01000047]
broad-scale environmental context
SeBiMER
broker name
2017-03-13
collection date
marine sediment metagenome
common name
10
m
depth
not applicable
m
elevation
shallow marine sediment [ENVO:03000034]
environmental medium
Sediment
environmental package
Yes
environmental_sample
France
geographic location (country and/or sea)
43.392317
DD
geographic location (latitude)
3.698883
DD
geographic location (longitude)
Sete harbor, open sea
geographic location (region and locality)
metagenome
investigation type
Surface sediment. First centimeters of sediments with cores taken by scuba divers at 10 meters deep.
isolation_source
coast [ENVO:01000687]|artificial harbor [ENVO:00000464]
local environmental context
marine sediment metagenome
organism
vibram
project name
GSC_MIxS_sediment
sample_checklist_description
18S rRNA (v4 loop) of protist metagenome from sediment collected in March of 2017, in the open sea close to Sete harbor, enriched by culturing on bacterial layers (E. coli) on agar plates for 2 weeks
sample_description
03-17-Se-S-E-coli
sample_name
marine sediment metagenome
scientific_name
18S rRNA
target gene
V4
target subfragment
18S V4 rRNA, Culturable protist diversity, from sediment collected in March, 2017, at Sete, and enriched on an E. coli lawn
title