ERC000021
ENA-CHECKLIST
Ifremer
INSDC center name
ERS27074023
SRA accession
sam_vibram_12-17-Ba-S-E-coli
Submitter Id
mediterranean sea biome [ENVO:01000047]
broad-scale environmental context
SeBiMER
broker name
2017-12-07
collection date
marine sediment metagenome
common name
30
m
depth
not applicable
m
elevation
shallow marine sediment [ENVO:03000034]
environmental medium
Sediment
environmental package
Yes
environmental_sample
France
geographic location (country and/or sea)
42.488333
DD
geographic location (latitude)
3.145
DD
geographic location (longitude)
Banyuls-sur-Mer, SOLA site
geographic location (region and locality)
metagenome
investigation type
Surface sediment. First centimeters of sediments with cores taken by scuba divers at 30 meters deep.
isolation_source
coast [ENVO:01000687]
local environmental context
marine sediment metagenome
organism
vibram
project name
GSC_MIxS_sediment
sample_checklist_description
18S rRNA (v4 loop) of protist metagenome from sediment collected in December of 2017, near the marine protected area of Banyuls-sur-Mer at SOLA station, enriched by culturing on bacterial layers (E. coli) on agar plates for 2 weeks
sample_description
12-17-Ba-S-E-coli
sample_name
marine sediment metagenome
scientific_name
18S rRNA
target gene
V4
target subfragment
18S V4 rRNA, Culturable protist diversity, from sediment collected in December, 2017, at Banyuls-sur-Mer, and enriched on an E. coli lawn
title