2025-11-10
ENA first public
ERC000013
ENA-CHECKLIST
Ifremer
INSDC center name
public
INSDC status
ERS26887069
SRA accession
sam_rimicaris_male_BIC2_PL14_ASPI2_Rimi396_cephalothorax
Submitter Id
age
marine hydrothermal vent biome
broad-scale environmental context
SeBiMER
broker name
IFREMER, 1625 route de Sainte-Anne, CS10070, 29280 Plouzane, FRANCE
collecting institution
2018-02-23T17:40:00
collection date
Valerie Cueff-Gauchard
collector name
crustacean metagenome
common name
adult
dev_stage
organ
environmental medium
HostAssociated
environmental package
Yes
environmental_sample
Atlantic Ocean
geographic location (country and/or sea)
3494
m
geographic location (depth)
not applicable
m
geographic location (elevation)
23.3691
DD
geographic location (latitude)
-44.9508
DD
geographic location (longitude)
Mid-Atlantic Ridge - Snake Pit
geographic location (region and locality)
bacteria_archaea
investigation type
BIC2_PL14_ASPI2_Rimi396
isolate
hydrothermal vent - Snake Pit - The Moose
isolation_source
marine faunal bed
local environmental context
crustacean metagenome
organism
phenotype
ploidy
rimicaris_male
project name
GSC_MIxS_host_associated
sample_checklist_description
16S partial rRNA (V3-V4) of Rimicaris exoculata cephalothorax symbionts, adult male from periphery from Snake Pit - The Moose site, collected during BICOSE2 oceanographic cruise, bacteria amplified by Direct PCR, shrimp number BIC2_PL14_ASPI2_Rimi396
sample_description
BIC2_PL14_ASPI2_Rimi396_cephalothorax
sample_name
crustacean metagenome
scientific_name
male
sex
71621
specific host
strain
16S rRNA
target gene
V3V4
target subfragment
cephalothorax
tissue_type
16S partial rRNA (V3-V4) of Rimicaris exoculata cephalothorax symbionts, adult male from periphery from Snake Pit - The Moose site - BICOSE2 cruise - sample BIC2_PL14_ASPI2_Rimi396
title