characteristics.text: SAMN47181594
characteristics.characteristic: External Id
characteristics.text: Helmholtz Centre for Environmental Research (UFZ)
characteristics.characteristic: INSDC center name
characteristics.text: 2025-03-31T00:00:00Z
characteristics.characteristic: INSDC first public
characteristics.text: 2025-09-26T06:54:40.150Z
characteristics.characteristic: INSDC last update
characteristics.text: SRS24227565
characteristics.characteristic: INSDC secondary accession
characteristics.text: live
characteristics.characteristic: INSDC status
characteristics.text: Metagenome or environmental
characteristics.characteristic: NCBI submission model
characteristics.text: Metagenome.environmental.1.0
characteristics.characteristic: NCBI submission package
characteristics.text: SRS24227565
characteristics.characteristic: SRA accession
characteristics.text: 2024-07
characteristics.characteristic: collection_date
characteristics.text: oxic, 10nM_TP233_1
characteristics.characteristic: description
characteristics.text: Germany: River Erpe
characteristics.characteristic: geo_loc_name
characteristics.text: not applicable
characteristics.characteristic: host
characteristics.text: enrichment from river sediment
characteristics.characteristic: isolation_source
characteristics.text: 52.4786 N 13.6351 E
characteristics.characteristic: lat_lon
characteristics.text: freshwater sediment metagenome
characteristics.ontologyTerms: http://purl.obolibrary.org/obo/NCBITaxon_556182
characteristics.characteristic: organism
characteristics.text: aerobe
characteristics.characteristic: rel_to_oxygen
characteristics.text: DNA was extracted from cell pellets from an enrichment culture after 7 days of incubation using the DNeasy PowerSoil Pro kit (Qiagen). Extracted DNA was sent to BGI for sequencing. The V3-V4 hypervariable region was amplified using the 338F (ACTCCTACGGGAGGCAGCAG) and 806R (GGACTACHVGGGTWTCTAAT) primers. Sequencing on the DNBSEQ-G400 platform in the paired-end mode with a read length of 300 bp per read.
characteristics.characteristic: samp_mat_process
characteristics.text: 1 ml
characteristics.characteristic: samp_size
characteristics.text: 19
characteristics.characteristic: sample_ID
characteristics.text: 10nM_TP233_1_t3
characteristics.characteristic: title