SAMN52391930
External Id
Makerere University College of Health Sciences
INSDC center name
2025-10-05T00:00:00Z
INSDC first public
2025-10-05T05:01:35.190Z
INSDC last update
live
INSDC status
MIGS/MIMS/MIMARKS.human-associated
NCBI submission model
MIGS.ba
NCBI submission model
MIGS.ba.human-associated.6.0
NCBI submission package
ERS28115684
SRA accession
2024
collection_date
This includes 26 randomly selected Klebsiella pneumoniae whole genome sequences generated by the MinION-UG project using the MinION sequencing platform. The MinION-UG project, funded by the Government of Uganda through the Makerere University Research and Innovations Fund (MAKRIF), aims to pilot MinION sequencing for tracking antimicrobial resistance and emerging or re-emerging infectious pathogens in Uganda. The WGS data were obtained from isolates collected across various regions of the country, coordinated through Mulago National Referral Hospital and the Clinical Microbiology Laboratory at the College of Health Sciences, Makerere University, ensuring broad geographic representation.
description
Human
env_broad_scale
Clinical samples
env_local_scale
Diverse
env_medium
Uganda
geo_loc_name
Homo sapiens
host
Microbial culture
isol_growth_condt
clinical sample
isolation_source
Not applicable
lat_lon
Not applicable
neg_cont_type
Not applicable
num_replicons
Klebsiella pneumoniae
http://purl.obolibrary.org/obo/NCBITaxon_573
organism
Not applicable
pos_cont_type
Not applicable
ref_biomaterial
Not applicable
strain
The MinION Uganda Project
title