Yes
16S recovered
Infernal: 1.1.5
16S recovery software
2025-11-28
ENA first public
ERC000050
ENA-CHECKLIST
Tree of Life Programme
INSDC center name
public
INSDC status
minimap2: 2.29-r1283; coverm: 0.7.0
MAG coverage software
ERS28163639
SRA accession
b687d7e4-f193-4d75-9f94-d7bf37056db1
Submitter Id
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly quality
metamdbg: 1.2
assembly software
graph; coverage; hic-mapping
binning parameters
maxbin2: 2.2.7; dastool: 1.1.7; bin3c: 0.3.3; metator: 1.3.10; metabat2: 2.17
binning software
aquatic biome
broad-scale environmental context
2023-08-11
collection date
95.12
%
completeness score
checkm2: 1.1.0
completeness software
0.35
%
contamination score
300
m
elevation
adult annelid tissue
environmental medium
Austria
geographic location (country and/or sea)
48.22
DD
geographic location (latitude)
16.27
DD
geographic location (longitude)
Hirudo verbana
host scientific name
311461
host taxid
metagenome-assembled genome
investigation type
Annelid: Hirudo verbana
isolation_source
freshwater biome
local environmental context
annelid metagenome
metagenomic source
22
number of standard tRNAs extracted
Bdellovibrionales bacterium
organism
ERGA
project name
submerge naked feet and legs into the pond to attract the individuals
sample collection method
SAMEA120641524
sample derived from
Bdellovibrionales bacterium
scientific_name
PacBio Revio; Illumina NovaSeqX
sequencing method
tRNAscan-SE: 2.0.12
tRNA extraction software
GTDB-Tk: 2.5.2; GTDB DB: r226
taxonomic classification
taxonomic novelty determined using RED
taxonomic identity marker
b687d7e4-f193-4d75-9f94-d7bf37056db1-erga-bge-wcHirVerb1_metamdbg_dastool_11
title
wcHirVerb1.Bdellovibrionales_1
tolid