Yes
16S recovered
Infernal: 1.1.5
16S recovery software
2025-11-28
ENA first public
ERC000047
ENA-CHECKLIST
Tree of Life Programme
INSDC center name
public
INSDC status
minimap2: 2.29-r1283; coverm: 0.7.0
MAG coverage software
ERS28163648
SRA accession
e706d2c5-5399-4a98-b4cd-6a60a4ea0cb9
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metamdbg: 1.2
assembly software
graph; coverage; hic-mapping
binning parameters
maxbin2: 2.2.7; dastool: 1.1.7; bin3c: 0.3.3; metator: 1.3.10; metabat2: 2.17
binning software
aquatic biome
broad-scale environmental context
2023-08-11
collection date
100
%
completeness score
checkm2: 1.1.0
completeness software
8.63
%
contamination score
300
m
elevation
adult annelid tissue
environmental medium
Austria
geographic location (country and/or sea)
48.22
DD
geographic location (latitude)
16.27
DD
geographic location (longitude)
Vienna
geographic location (region and locality)
Hirudo verbana
host scientific name
311461
host taxid
metagenome-assembled genome
investigation type
Annelid: Hirudo verbana
isolation_source
freshwater biome
local environmental context
annelid metagenome
metagenomic source
22
number of standard tRNAs extracted
Pedobacter sp.
organism
ERGA
project name
submerge naked feet and legs into the pond to attract the individuals
sample collection method
SAMEA120641524
sample derived from
Pedobacter sp.
scientific_name
PacBio Revio; Illumina NovaSeqX
sequencing method
tRNAscan-SE: 2.0.12
tRNA extraction software
GTDB-Tk: 2.5.2; GTDB DB: r226
taxonomic classification
taxonomic classification fully defined by topology
taxonomic identity marker
e706d2c5-5399-4a98-b4cd-6a60a4ea0cb9-erga-bge-wcHirVerb1_metamdbg_dastool_12
title
wcHirVerb1.Pedobacter_sp_1
tolid