2025-11-28
ENA first public
ERC000050
ENA-CHECKLIST
LVBMC
INSDC center name
public
INSDC status
ERS28161044
SRA accession
8_bin49_IDBA_re-assembly_contigs.fa
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPAdes_v.4.0.0
assembly software
default
binning parameters
BASALT_v1.1.0
binning software
marine biome
broad-scale environmental context
not provided
collection date
53.02
%
completeness score
CheckM2_v1.0.1
completeness software
5.5
%
contamination score
This sample represents a binned_metagenome assembled from the metagenomic runs ERR14964226,ERR14964370,ERR14964371,ERR14964478,ERR14964479,ERR14964529,ERR14964811,ERR14976768,ERR15003406,ERR15003451,ERR14953071 of study ERP171281.
description
water
environmental medium
Latvia
geographic location (country and/or sea)
not provided
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
marine metagenome
isolation_source
marine surface water
local environmental context
marine metagenome
metagenomic source
Alphaproteobacteria bacterium
organism
Marine metagenomic library of Baltic Sea from three distinct locations collected during the period from August to October 2024 in Latvia
project name
SAMEA118204275,SAMEA118204276,SAMEA118204277,SAMEA118204278,SAMEA118204279,SAMEA118204280,SAMEA118204281,SAMEA118204283,SAMEA118331817,SAMEA118331818,SAMEA118204263
sample derived from
Alphaproteobacteria bacterium
scientific_name
DNBSEQ-G400
sequencing method
multi-marker approach
taxonomic identity marker
binned_metagenome: 8_bin49_IDBA_re-assembly_contigs.fa
title