2025-11-30
ENA first public
ERC000024
ENA-CHECKLIST
SAMEA114777045
External Id
Edge Hill University
INSDC center name
2023-11-30T15:11:17Z
INSDC last update
public
INSDC status
ERS17197792
SRA accession
Halomonas sp. MARW-1-7-2
Submitter Id
marine salt marsh biome [ENVO:01000022]
broad-scale environmental context
2017-08-06
collection date
0.1
m
depth
Halomonas sp. strain MARW-1-7-2 was isolated from the salt marsh surface sea water sampled at RSPB Marshside, UK. The submitted data set contains 16S ribosomal RNA gene sequence of this study isolate retrieved from its genome sequence data.
description
moderately saline water [ENVO_01001038]
environmental medium
1540 bp
estimated size
United Kingdom
geographic location (country and/or sea)
53.679
DD
geographic location (latitude)
2.996
DD
geographic location (longitude)
RSPB Marshside Nature Reserve, Southport, Merseyside, North-West of England
geographic location (region and locality)
Nextera XT Library Prep Kit, Illumina, San Diego, USA
library construction method
sea water [ENVO_00002149]
local environmental context
Halomonas sp. MARW-1-7-2
organism
Novel species characterisation of Halomonas sp. MARW-1-7-2
project name
Halomonas sp. strain MARW-1-7-2 was retrieved from salt marsh surface sea water sample via microbial inoculation and isolation on sterile marine agar, Difco�, 2216 medium (pH 7.6�0.2, NaCl 4% (w/v)). The genome of study isolate was sequenced on the Illumina HiSeq 2500 platform using a 250 bp paired end protocol and 30x coverage. The 16S ribosomal RNA gene sequence was retrieved from its genome sequence data.
sample material processing
Halomonas sp. MARW-1-7-2
scientific_name
software
sequence quality check
Illumina HiSeq 2500
sequencing method
16S ribosomal RNA gene
target gene
Halomonas sp. MARW-1-7-2 16S ribosomal RNA gene
title