Yes
16S recovered
Infernal: 1.1.5
16S recovery software
2025-12-02
ENA first public
ERC000050
ENA-CHECKLIST
Tree of Life Programme
INSDC center name
public
INSDC status
minimap2: 2.3; coverm: 0.7.0
MAG coverage software
ERS28170216
SRA accession
5d85b37a-274f-40d2-97ae-1ff947e0c1a1
Submitter Id
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly quality
metamdbg: 1.2
assembly software
graph; coverage; hic-mapping
binning parameters
dastool: 1.1.7; metabat2: 2.17; metator: 1.3.10; maxbin2: 2.2.7; bin3c: 0.3.3
binning software
aquatic biome
broad-scale environmental context
2017-02-19
collection date
90.06
%
completeness score
checkm2: 1.1.0
completeness software
0.0
%
contamination score
656
m
depth
adult sponge tissue
environmental medium
Pacific Ocean
geographic location (country and/or sea)
-45.03
DD
geographic location (latitude)
171.90
DD
geographic location (longitude)
Biemna sp. UH-2024
host scientific name
3127775
host taxid
metagenome-assembled genome
investigation type
Sponge: Biemna sp. UH-2024
isolation_source
marine biome
local environmental context
sponge metagenome
metagenomic source
21
number of standard tRNAs extracted
Candidatus Mycalebacterium sp.
organism
ASG
project name
SAMEA120648100
sample derived from
Candidatus Mycalebacterium sp.
scientific_name
Illumina NovaSeqX; Illumina NovaSeqX; PacBio Revio; Illumina NovaSeqX
sequencing method
tRNAscan-SE: 2.0.12
tRNA extraction software
GTDB-Tk: 2.5.2; GTDB DB: r226
taxonomic classification
taxonomic classification defined by topology and ANI
taxonomic identity marker
5d85b37a-274f-40d2-97ae-1ff947e0c1a1-asg-odBieUhxx1_metamdbg_dastool_6
title
odBieUhxx1.Candidatus_Mycalebacterium_sp_1
tolid