Yes
16S recovered
Infernal: 1.1.5
16S recovery software
2025-12-02
ENA first public
ERC000050
ENA-CHECKLIST
Tree of Life Programme
INSDC center name
public
INSDC status
minimap2: 2.3; coverm: 0.7.0
MAG coverage software
ERS28177015
SRA accession
bd7b3366-b28a-4dd3-b8fc-ef1720e55c48
Submitter Id
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly quality
metamdbg: 1.2
assembly software
graph; coverage; hic-mapping
binning parameters
maxbin2: 2.2.7; metabat2: 2.17; bin3c: 0.3.3; dastool: 1.1.7
binning software
aquatic biome
broad-scale environmental context
2018-08-02
collection date
96.14
%
completeness score
checkm2: 1.1.0
completeness software
3.24
%
contamination score
587
m
depth
adult sponge tissue
environmental medium
Atlantic Ocean
geographic location (country and/or sea)
73.84
DD
geographic location (latitude)
7.57
DD
geographic location (longitude)
Craniella infrequens
host scientific name
3115544
host taxid
metagenome-assembled genome
investigation type
Sponge: Craniella infrequens
isolation_source
marine biome
local environmental context
sponge metagenome
metagenomic source
24
number of standard tRNAs extracted
Vicinamibacteria bacterium
organism
ASG
project name
SAMEA120654848
sample derived from
Vicinamibacteria bacterium
scientific_name
PacBio Revio; Illumina NovaSeqX; PacBio Revio; PacBio Revio; PacBio Revio; Illumina NovaSeqX; PacBio Revio
sequencing method
tRNAscan-SE: 2.0.12
tRNA extraction software
GTDB-Tk: 2.5.2; GTDB DB: r226
taxonomic classification
taxonomic novelty determined using RED
taxonomic identity marker
bd7b3366-b28a-4dd3-b8fc-ef1720e55c48-asg-odCraInfr1_metamdbg_dastool_178
title
odCraInfr1.Vicinamibacteria_2
tolid