ERC000047
ENA-CHECKLIST
EBI
INSDC center name
ERS11633408
SRA accession
SRR12240184_bin.7_CONCOCT_v1.1_MAG
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaspades_v3.13.0
assembly software
Default
binning parameters
CONCOCT v1.1
binning software
Algae
broad-scale environmental context
EMG broker account, EMBL-EBI
broker name
2016-01-01
collection date
74.06
%
completeness score
CheckM
completeness software
0.75
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR12240184 of study SRP272267.
description
Green algae
environmental medium
USA
geographic location (country and/or sea)
not provided
DD
geographic location (latitude)
not provided
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
lichen metagenome
isolation_source
Ectosymbionts
local environmental context
lichen metagenome
metagenomic source
Physciaceae sp.
organism
short, metagnomic reads from lichen thalli
project name
SAMN15548981
sample derived from
Physciaceae sp.
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRR12240184_bin.7_CONCOCT_v1.1_MAG
title