2025-12-05
ENA first public
ERC000047
ENA-CHECKLIST
EMG
INSDC center name
public
INSDC status
ERS28312373
SRA accession
SRR15829561_concoct_11_cl
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaSPADES_v3.15.5
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.0.0
binning software
poultry
broad-scale environmental context
EBI-EMG
broker name
2020-12
collection date
50.45
%
completeness score
CheckM2_v1.0.1
completeness software
4.98
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR15829561 of study SRP336334.
description
cecal material
environmental medium
Belgium
geographic location (country and/or sea)
51.03000000
DD
geographic location (latitude)
3.43000000
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
chicken gut metagenome
isolation_source
chicken
local environmental context
chicken gut metagenome
metagenomic source
uncultured Clostridia bacterium
organism
Cecal microbiome and resistome of broiler chickens receiving a synbiotic supplementation and/or enrofloxacin
project name
SAMN21367376
sample derived from
uncultured Clostridia bacterium
scientific_name
NextSeq 500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRR15829561_concoct_11_cl
title