2025-12-07
ENA first public
ERC000011
ENA-CHECKLIST
SAMEA114819490
External Id
Center for Microbial Communities
INSDC center name
2023-12-07T10:03:45Z
INSDC last update
public
INSDC status
ERS17244357
SRA accession
MFD01561.bin.1.13
Submitter Id
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S and 5S rRNA genes and at least 18 tRNAs
assembly quality
Ensemble iterative binning using coverage and kmer
binning parameters
MetaBAT2, GraphMB, SemiBin2, DAS Tool, mmlong2
binning software
Freshwater
broad-scale environmental context
2020-07-15
collection date
91.14
completeness score
CheckM2
completeness software
3.1
contamination score
HQ MAG for uncultured Alphaproteobacteria bacterium, recovered from an environmental sample from Denmark
description
not collected
environmental medium
Denmark
geographic location (country and/or sea)
57.4821
geographic location (latitude)
10.085
geographic location (longitude)
Sediment
isolation_source
Running freshwater
local environmental context
sediment metagenome
metagenomic source
uncultured Alphaproteobacteria bacterium
organism
Microflora Danica
project name
ERS14381630
sample derived from
uncultured Alphaproteobacteria bacterium
scientific_name
multi-marker approach
taxonomic identity marker
MAG for uncultured Alphaproteobacteria bacterium
title