2025-12-07
ENA first public
ERC000047
ENA-CHECKLIST
EMG
INSDC center name
public
INSDC status
ERS28313579
SRA accession
SRR6915176_bin_1032
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
metaspades_v3.15.5
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v2.0.0
binning software
human
broad-scale environmental context
EBI-EMG
broker name
2016-01-11
collection date
89.71
%
completeness score
CheckM2_v1.0.1
completeness software
0.56
%
contamination score
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR6915176 of study SRP136711.
description
intestine
environmental medium
Italy
geographic location (country and/or sea)
45.41402800
DD
geographic location (latitude)
9.20826800
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
human gut metagenome
isolation_source
digestive system
local environmental context
human gut metagenome
metagenomic source
uncultured Erysipelotrichaceae bacterium
organism
We used state-of-the-art whole-metagenome shotgun sequencing analysis methods to uniformly quantify taxonomic and functional abundance in fecal CRC metagenomes from 140 participants recruited in two new Italian cohorts.
project name
SAMN08813933
sample derived from
uncultured Erysipelotrichaceae bacterium
scientific_name
Illumina HiSeq 2500
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: SRR6915176_bin_1032
title