2025-12-12
ENA first public
ERC000047
ENA-CHECKLIST
NIH/NHGRI
INSDC center name
public
INSDC status
ERS28326731
SRA accession
ERR594329_metabat2_35_metabat2_13
Submitter Id
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly quality
MEGAHIT_v1.2.9
assembly software
default
binning parameters
MGnify-genomes-generation-pipeline_v1.3.0
binning software
marine biome (ENVO:00000447)
broad-scale environmental context
missing: third party data
collection date
85.2
%
completeness score
EukCC_v2.1.3
completeness software
0.6
%
contamination score
This sample represents a Metagenome-assembled genome assembled from the metagenomic runs ERR594329 of study ERP001737.
description
saline water (ENVO:00002010) and particulate matter, including plankton (ENVO:xxxxxxxx)
environmental medium
missing: third party data
geographic location (country and/or sea)
39.0609
DD
geographic location (latitude)
5.9422
DD
geographic location (longitude)
metagenome-assembled genome
investigation type
marine metagenome
isolation_source
deep chlorophyll maximum layer (ENVO:xxxxxxxx)
local environmental context
marine metagenome
metagenomic source
Bathycoccus prasinos
organism
Seawater was filtered from different depths to retain small cell sizes. The DNA was extracted and submitted to high throughput sequencing.
project name
SAMEA2619548
sample derived from
Bathycoccus prasinos
scientific_name
Illumina HiSeq 2000
sequencing method
multi-marker approach
taxonomic identity marker
Metagenome-assembled genome: ERR594329_metabat2_35_metabat2_13
title