characteristics.text: SAMN04546487
characteristics.characteristic: External Id
characteristics.text: INRA
characteristics.characteristic: INSDC center name
characteristics.text: 2016-03-11T00:00:00Z
characteristics.characteristic: INSDC first public
characteristics.text: 2025-12-03T13:19:07.546Z
characteristics.characteristic: INSDC last update
characteristics.text: SRS4261976
characteristics.characteristic: INSDC secondary accession
characteristics.text: live
characteristics.characteristic: INSDC status
characteristics.text: Microbe, viral or environmental
characteristics.characteristic: NCBI submission model
characteristics.text: Microbe.1.0
characteristics.characteristic: NCBI submission package
characteristics.text: SRS4261976
characteristics.characteristic: SRA accession
characteristics.text: CFBP8418
characteristics.characteristic: biomaterial provider
characteristics.text: LSV ANSES
characteristics.characteristic: collected by
characteristics.text: 2015
characteristics.characteristic: collection date
characteristics.text: CIRM-CFBP:8418
characteristics.characteristic: culture_collection
characteristics.text: Xylella fastidiosa, a bacterial plant pathogen confined in the past to the Americas, recently emerged in Europe. It was first reported in natural settings in France from Polygala myrtifolia shrubs in Corsica in July 2015 and in south-eastern mainland France in October 2015. These ornamentals were symptomatic and presented severe leaf scorches. All contaminated samples from France presented bacteria belonging to X. fastidiosa subsp. multiplex, based on multiprimer PCR (Hernandez-Martinez et al., Phytopathol. 2006) analyses run on DNAs extracted from the infected plant samples. A MLST scheme was used to type these bacteria which are characterized by two X. fastidiosa subsp. multiplex bona fide sequence types, ST6 and ST7. Three strains were isolated from Polygala myrtifolia (CFBP 8416; ST7) and Spartium junceum (CFBP 8417 and CFBP 8418; ST6). The genomes of these strains were sequenced using the Illumina Mi-Seq technology.
characteristics.characteristic: description
characteristics.text: France: Corse, Alata
characteristics.characteristic: geo loc name
characteristics.text: Spartium junceum
characteristics.characteristic: host
characteristics.text: petiole
characteristics.ontologyTerms: http://purl.obolibrary.org/obo/PO_0020038
characteristics.characteristic: host_tissue_sampled
characteristics.text: LSV ANSES
characteristics.characteristic: identified by
characteristics.text: LSV46.79
characteristics.characteristic: isolate_name_alias
characteristics.text: petiole from symptomatic leaf
characteristics.characteristic: isolation source
characteristics.text: Xylella fastidiosa subsp. multiplex
characteristics.ontologyTerms: http://purl.obolibrary.org/obo/NCBITaxon_644357
characteristics.characteristic: organism
characteristics.text: cell culture
characteristics.ontologyTerms: http://purl.obolibrary.org/obo/BTO_0000214
characteristics.characteristic: sample type
characteristics.text: CFBP 8418
characteristics.characteristic: strain
characteristics.text: multiplex
characteristics.characteristic: sub species
characteristics.text: Microbe sample from Xylella fastidiosa subsp. multiplex
characteristics.characteristic: title