2025-12-23
ENA first public
ERC000048:1.6
ENA-CHECKLIST
EI
INSDC center name
public
INSDC status
ERS28326253
SRA accession
Bodo F10
Submitter Id
mda based
WGA amplification approach
SPAdes (version 3.15.5) with single-cell mode enabled (--sc) and k-mer sizes 21, 33, 55, and 77
assembly software
freshwater river biome (ENVO:01000253)
broad-scale environmental context
2022-08-30
collection date
75.4
%
completeness score
BUSCO (v5.3.2)
completeness software
0
%
contamination score
Single cell genome assembly for Bodo F10. This sample represents a Single-Cell Amplified Genome derived from the environmental sample ERS26788776
description
fresh water (ENVO:00002011)
environmental medium
United Kingdom
geographic location (country and/or sea)
52.287295
DD
geographic location (latitude)
-1.547563
DD
geographic location (longitude)
River water
isolation_source
river water (ENVO:01000599)
local environmental context
Freshwater  metagenome
metagenomic source
Bodo sp.
organism
Single cell sequencing raw reads, assemblies, and annotations for seven Bodo spp. flagellates and their bacterial cobionts
project name
ERS26788776
sample derived from
Bodo sp.
scientific_name
chemical
single cell or viral particle lysis approach
flow cytometric cell sorting
sorting technology
Multi marker approach
taxonomic identity marker
Bodo F10  single cell genome assembly
title