2025-12-24
ENA first public
ERC000011
ENA-CHECKLIST
AquaGen
INSDC center name
public
INSDC status
ERS28326305
SRA accession
E-MTAB-16378:NS2QqF1
Submitter Id
NAN
age
ArrayExpress
broker name
not collected
collection date
Atlantic salmon
common name
Protocols: Fish from the bucket challenge were sampled at 15 and 23 days post-challenge and stored in RNALater solution for downstream RNA extraction.  Total RNA was extracted from liver stored in RNALater using RNeasy Mini kit (Qiagen®). A rotor-stator homogenizer (TissueRuptor® II, Qiagen®) was used to disrupt and homogenize the tissue. RNA was peluted according the manual. RNA was eluted in RNase-free water previously heated at 90°C. The RNA samples were labelled and stored at -80°C until processed downstream  Libraries were constructed by NovoGene
description
fry
developmental stage
Qq
genotype
not collected
geographic location (country and/or sea)
26
individual
NewStrain
infect
not applicable
isolate
Salmo salar
organism
Salmo salar
organism
liver
organism part
Salmo salar
scientific_name
NAN
sex
NAN
strain
NS2QqF1
title