SAMN53913211
External Id
USACE-Engineer Research and Development Center
INSDC center name
2025-12-12T00:00:00Z
INSDC first public
2025-12-18T10:51:40.707Z
INSDC last update
SRS27502386
INSDC secondary accession
live
INSDC status
MIMS.me
NCBI submission model
MIGS/MIMS/MIMARKS.soil
NCBI submission model
MIMS.me.soil.6.0
NCBI submission package
SRS27502386
SRA accession
360.7 mm
annual_precpt
ITS1F + ITS2R
assay
2022-04
collection_date
open oak-juniper savannah/encinal woodland
cur_vegetation
2-8
depth
Keywords: GSC:MIxS;MIMS:6.0
description
128 m from center NW
distance_direction_from_center_point
1688.3
elev
montane shrubland biome[ENVO_01000216]|montane savanna biome[ENVO_01000223]|temperate savanna biome[ENVO_01000189]
env_broad_scale
montane shrubland biome[ENVO_01000216]|montane savanna biome[ENVO_01000223]|temperate savanna biome[ENVO_01000189]
env_local_scale
soil environment[ENVO_01001044]
env_medium
USA: Arizona, Fort Huachuca, FH Garden Canyon
geo_loc_name
31.47297 N 110.36003 W
lat_lon
soil metagenome
http://purl.obolibrary.org/obo/NCBITaxon_410658
organism
0
ph
H2O extracted
ph_meth
OAKSAV2
plot
Six replicates of each sample were extracted and then pooled together into one sample before amplification. We wanted to increase the likelihood of capturing eDNA.
pool_dna_extracts
Approx. 30 ml of soil
samp_size
Approx. 0.25 g
samp_vol_we_dna_ext
% Sand 39.066, % Silt 45.508, % Clay 14.834, Loam
soil_text_measure
Malvern MasterSizer
soil_texture_meth
Haplustolls
soil_type
Samples were stored in 30mls of RNA later and kept at 4ºC until they were extracted.
store_cond
MIMS Environmental/Metagenome sample from soil metagenome
title