PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300037489
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28387025
SRA accession
SRX9141055
SRA_experiment_ID
3300037489___IMGM3300037489_BIN312
Submitter Id
metaspades;3.13.0; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
marine biome [ENVO:00000447]
broad-scale environmental context
2017-03-19
collection date
Plastid metagenome-assembled genome BIN312 from untreated marine sediment collected at USA: California. Reconstructed through metagenomic binning.
description
marine sediment [ENVO:00002113]
environmental medium
USA
geographic location (country and/or sea)
37.0366 N
geographic location (latitude)
121.2986 W
geographic location (longitude)
untreated marine sediment
isolation_source
oceanic zone [ENVO:00000033]
local environmental context
ecological metagenome
metagenomic source
BIN312
metagenomic_bin
Bacillariophyceae sp.
organism
Global plastid metagenome-assembled genome
project name
SAMN15738978
sample derived from
Bacillariophyceae sp.
scientific_name
Ochrophyceae
taxonomic_placement
Marine sediment microbial communities off the coast of San Francisco, CA, United States - OC_500m_C5_0cm2cm
title