PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300005861
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28386252
SRA accession
SRX3316449
SRA_experiment_ID
3300005861___IMGM3300005861_BIN548
Submitter Id
SPAdes;3.5.0; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
aquatic biome [ENVO:00002030]
broad-scale environmental context
2005-08-02
collection date
Plastid metagenome-assembled genome BIN548 from Yellowstone National Park, Wyoming, USA collected at USA: Yellowstone National Park, Wyoming. Reconstructed through metagenomic binning.
description
sediment [ENVO:00002007]
environmental medium
USA
geographic location (country and/or sea)
44.376 N
geographic location (latitude)
110.69 W
geographic location (longitude)
Yellowstone National Park, Wyoming, USA
isolation_source
aquatic feature [ENVO:00002236]
local environmental context
ecological metagenome
metagenomic source
BIN548
metagenomic_bin
uncultured Cyanidiaceae
organism
Global plastid metagenome-assembled genome
project name
SAMN06268705
sample derived from
uncultured Cyanidiaceae
scientific_name
Rhodophyceae
taxonomic_placement
Ferric oxide microbial mat and aquatic microbial communities from Rainbow Spring, Yellowstone National Park, USA - RS3B (SPADES assembly) (version 2)
title