PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300012936
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28386333
SRA accession
SRX3375198
SRA_experiment_ID
3300012936___IMGM3300012936_BIN194
Submitter Id
MEGAHIT;1.0.6; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
marine biome [ENVO:00000447]
broad-scale environmental context
2005-07-25
collection date
Plastid metagenome-assembled genome BIN194 from surface seawater collected at Costa Rica: the Eastern Pacific. Reconstructed through metagenomic binning.
description
sea water [ENVO:00002149]
environmental medium
Costa Rica
geographic location (country and/or sea)
9.5025 N
geographic location (latitude)
92.3286 W
geographic location (longitude)
surface seawater
isolation_source
oceanic zone [ENVO:00000033]
local environmental context
ecological metagenome
metagenomic source
BIN194
metagenomic_bin
Prymnesiophyceae sp.
organism
Global plastid metagenome-assembled genome
project name
SAMN07632551
sample derived from
Prymnesiophyceae sp.
scientific_name
Haptophyceae
taxonomic_placement
Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaG
title