PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300045742
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28387237
SRA accession
SRX30564090
SRA_experiment_ID
IMGM3300045742_BIN392
Submitter Id
metaspades;3.14.1; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
freshwater biome [ENVO:01001357]
broad-scale environmental context
2019-10-07
collection date
Plastid metagenome-assembled genome  BIN392 from freshwater sediment collected at USA: Massachusetts. Reconstructed through metagenomic binning.
description
freshwater sediment [ENVO:00002144]
environmental medium
USA
geographic location (country and/or sea)
41.9107 N
geographic location (latitude)
70.6439 W
geographic location (longitude)
freshwater sediment
isolation_source
aquatic feature [ENVO:00002236]
local environmental context
ecological metagenome
metagenomic source
BIN392
metagenomic_bin
Bacillariophyceae sp.
organism
Global plastid metagenome-assembled genome
project name
SAMN51148679
sample derived from
Bacillariophyceae sp.
scientific_name
Ochrophyceae
taxonomic_placement
Sediment microbial communities from Eel River, Massachusetts, United States - BTRS19_Sengupta_11F
title