PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300021964
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28386473
SRA accession
SRX4053110
SRA_experiment_ID
3300021964___Ga0222719_10004383
Submitter Id
SPAdes;3.11.1; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
marine biome [ENVO:00000447]
broad-scale environmental context
2013-10-24
collection date
Plastid metagenome-assembled genome from Water column collected at USA: California. Reconstructed through metagenomic binning.
description
sea water [ENVO:00002149]
environmental medium
USA
geographic location (country and/or sea)
37.495 N
geographic location (latitude)
122.0933 W
geographic location (longitude)
Water column
isolation_source
aquatic feature [ENVO:00002236]
local environmental context
ecological metagenome
metagenomic source
uncultured Mamiellophyceae
organism
Global plastid metagenome-assembled genome
project name
SAMN08769304
sample derived from
uncultured Mamiellophyceae
scientific_name
Chlorophyceae
taxonomic_placement
Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D
title