PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300001357
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28387196
SRA accession
SRX2021703
SRA_experiment_ID
IMGM3300001357_BIN133
Submitter Id
metaspades;3.15.2; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
saline hydrographic feature [ENVO:00000569]
broad-scale environmental context
2011-08-11
collection date
Plastid metagenome-assembled genome  BIN133 from Elkhorn Slough, Monterey Bay, California, USA collected at USA: Elkhorn Slough, Monterey Bay, California. Reconstructed through metagenomic binning.
description
sediment [ENVO:00002007]
environmental medium
USA
geographic location (country and/or sea)
missing
geographic location (latitude)
missing
geographic location (longitude)
Elkhorn Slough, Monterey Bay, California, USA
isolation_source
saline lake [ENVO:00000254]
local environmental context
ecological metagenome
metagenomic source
BIN133
metagenomic_bin
Bacillariophyceae sp.
organism
Global plastid metagenome-assembled genome
project name
SAMN05518183
sample derived from
Bacillariophyceae sp.
scientific_name
Ochrophyceae
taxonomic_placement
Combined assembly of Elkhorn Slough mat metaG (MD2A, MD6A, CD2A, CD6A)
title