PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300026251
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28386676
SRA accession
SRX3203252
SRA_experiment_ID
3300026251___IMGM3300026251_BIN335
Submitter Id
SPAdes;3.11.1; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
marine biome [ENVO:00000447]
broad-scale environmental context
2014-07-11
collection date
Plastid metagenome-assembled genome BIN335 from Pond R2 soil collected at USA: South San Francisco, California. Reconstructed through metagenomic binning.
description
sea water [ENVO:00002149]
environmental medium
USA
geographic location (country and/or sea)
37.4961 N
geographic location (latitude)
122.1331 W
geographic location (longitude)
Pond R2 soil
isolation_source
intertidal zone [ENVO:00000316]
local environmental context
ecological metagenome
metagenomic source
BIN335
metagenomic_bin
uncultured Eustigmatophyceae
organism
Global plastid metagenome-assembled genome
project name
SAMN07631159
sample derived from
uncultured Eustigmatophyceae
scientific_name
Ochrophyceae
taxonomic_placement
Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_B_D2_MG (SPAdes) (version 2)
title