PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300027906
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28386775
SRA accession
SRX2997972
SRA_experiment_ID
3300027906___IMGM3300027906_BIN554
Submitter Id
SPAdes;3.11.1; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
marine biome [ENVO:00000447]
broad-scale environmental context
2012-11-09
collection date
Plastid metagenome-assembled genome BIN554 from Tropical Atlantic Ocean collected at Atlantic Ocean. Reconstructed through metagenomic binning.
description
sea water [ENVO:00002149]
environmental medium
Atlantic Ocean
geographic location (country and/or sea)
15.249 N
geographic location (latitude)
20.515 W
geographic location (longitude)
Tropical Atlantic Ocean
isolation_source
oceanic zone [ENVO:00000033]
local environmental context
ecological metagenome
metagenomic source
BIN554
metagenomic_bin
uncultured Chlorophyceae
organism
Global plastid metagenome-assembled genome
project name
SAMN06266136
sample derived from
uncultured Chlorophyceae
scientific_name
Chlorophyceae
taxonomic_placement
Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes) (version 2)
title