PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300042156
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28387054
SRA accession
SRX30250633
SRA_experiment_ID
3300042156___Ga0439446_0000062
Submitter Id
metaspades;3.14.1; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
aquatic biome [ENVO:00002030]
broad-scale environmental context
2017-08-28
collection date
Plastid metagenome-assembled genome from Sorghum rhizosphere collected at USA: Nebraska. Reconstructed through metagenomic binning.
description
water [ENVO:00002006]
environmental medium
USA
geographic location (country and/or sea)
41.8942 N
geographic location (latitude)
103.685 W
geographic location (longitude)
Sorghum rhizosphere
isolation_source
aquatic feature [ENVO:00002236]
local environmental context
ecological metagenome
metagenomic source
Streptophyta sp.
organism
Global plastid metagenome-assembled genome
project name
SAMN18246383
sample derived from
Streptophyta sp.
scientific_name
Streptophyceae
taxonomic_placement
Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593
title