PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300020203
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28387200
SRA accession
SRX3539173
SRA_experiment_ID
IMGM3300020203_BIN119
Submitter Id
SPAdes;3.10.1; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
freshwater biome [ENVO:01001357]
broad-scale environmental context
2013-01-01
collection date
Plastid metagenome-assembled genome  BIN119 from Oligotrophic lake microbial mat collected at Antarctica: Lake Vanda, McMurdo Dry Valleys. Reconstructed through metagenomic binning.
description
freshwater sediment [ENVO:00002144]
environmental medium
Antarctica
geographic location (country and/or sea)
77.5281 S
geographic location (latitude)
161.59 E
geographic location (longitude)
Oligotrophic lake microbial mat
isolation_source
lake [ENVO:00000020]
local environmental context
ecological metagenome
metagenomic source
BIN119
metagenomic_bin
Bacillariophyceae sp.
organism
Global plastid metagenome-assembled genome
project name
SAMN06269050
sample derived from
Bacillariophyceae sp.
scientific_name
Ochrophyceae
taxonomic_placement
Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica- Oligotrophic Lake LV.19.MP7.P2
title