PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300027808
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28386748
SRA accession
SRX2564972
SRA_experiment_ID
3300027808___IMGM3300027808_BIN594
Submitter Id
SPAdes;3.11.1; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
freshwater biome [ENVO:01001357]
broad-scale environmental context
2013-04-23
collection date
Plastid metagenome-assembled genome BIN594 from Lake Michigan, USA collected at USA: Lake Michigan. Reconstructed through metagenomic binning.
description
freshwater [ENVO:00002011]
environmental medium
USA
geographic location (country and/or sea)
43.1998 N
geographic location (latitude)
86.5698 W
geographic location (longitude)
Lake Michigan, USA
isolation_source
lake [ENVO:00000020]
local environmental context
ecological metagenome
metagenomic source
BIN594
metagenomic_bin
uncultured Geminigeraceae
organism
Global plastid metagenome-assembled genome
project name
SAMN06268090
sample derived from
uncultured Geminigeraceae
scientific_name
Cryptophyceae
taxonomic_placement
Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes) (version 2)
title