PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300027506
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28386700
SRA accession
SRX2572620
SRA_experiment_ID
3300027506___IMGM3300027506_BIN50
Submitter Id
SPAdes;3.11.1; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
marine biome [ENVO:00000447]
broad-scale environmental context
2011-06-16
collection date
Plastid metagenome-assembled genome BIN50 from Monterey Bay, California, USA collected at USA: Monterey Bay, California. Reconstructed through metagenomic binning.
description
sea water [ENVO:00002149]
environmental medium
USA
geographic location (country and/or sea)
36.25 N
geographic location (latitude)
122.2099 W
geographic location (longitude)
Monterey Bay, California, USA
isolation_source
intertidal zone [ENVO:00000316]
local environmental context
ecological metagenome
metagenomic source
BIN50
metagenomic_bin
uncultured Mamiellophyceae
organism
Global plastid metagenome-assembled genome
project name
SAMN06267890
sample derived from
uncultured Mamiellophyceae
scientific_name
Chlorophyceae
taxonomic_placement
Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_66_BLW_10 (SPAdes)
title