PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300021091
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28386428
SRA accession
SRX4821686
SRA_experiment_ID
3300021091___IMGM3300021091_BIN1003
Submitter Id
SPAdes;3.10.1; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
freshwater biome [ENVO:01001357]
broad-scale environmental context
2015-10-23
collection date
Plastid metagenome-assembled genome BIN1003 from lake water collected at Tanzania: Lake Tanganyika. Reconstructed through metagenomic binning.
description
freshwater [ENVO:00002011]
environmental medium
Tanzania
geographic location (country and/or sea)
4.8915 S
geographic location (latitude)
29.586 E
geographic location (longitude)
lake water
isolation_source
lake [ENVO:00000020]
local environmental context
ecological metagenome
metagenomic source
BIN1003
metagenomic_bin
Bacillariophyceae sp.
organism
Global plastid metagenome-assembled genome
project name
SAMN08779390
sample derived from
Bacillariophyceae sp.
scientific_name
Ochrophyceae
taxonomic_placement
Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015055 Kigoma Offshore 40m
title