PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300043423
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28387097
SRA accession
SRX30290331
SRA_experiment_ID
3300043423___IMGM3300043423_BIN281
Submitter Id
metaspades;3.14.1; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
freshwater biome [ENVO:01001357]
broad-scale environmental context
2019-08-19
collection date
Plastid metagenome-assembled genome BIN281 from river surface water collected at USA: Salt Lake City, Utah. Reconstructed through metagenomic binning.
description
freshwater [ENVO:00002011]
environmental medium
USA
geographic location (country and/or sea)
40.7801 N
geographic location (latitude)
111.8054 W
geographic location (longitude)
river surface water
isolation_source
aquatic feature [ENVO:00002236]
local environmental context
ecological metagenome
metagenomic source
BIN281
metagenomic_bin
Zygnematophyceae sp.
organism
Global plastid metagenome-assembled genome
project name
SAMN18247283
sample derived from
Zygnematophyceae sp.
scientific_name
Streptophyceae
taxonomic_placement
Freshwater microbial communities from Red Butte Creek, Salt Lake City, Utah, USA - redbuttecreek_2019_sw_WHONDRS-S19S_0086
title