PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300038408
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28387042
SRA accession
SRX9405591
SRA_experiment_ID
3300038408___IMGM3300038408_BIN541
Submitter Id
metaspades;3.13.0; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
marine biome [ENVO:00000447]
broad-scale environmental context
2020-01-22
collection date
Plastid metagenome-assembled genome BIN541 from submerged sediment with a high abundance of vegetation from freshwater canal collected at USA: Florida. Reconstructed through metagenomic binning.
description
marine sediment [ENVO:00002113]
environmental medium
USA
geographic location (country and/or sea)
26.469 N
geographic location (latitude)
80.4434 W
geographic location (longitude)
submerged sediment with a high abundance of vegetation from freshwater canal
isolation_source
aquatic feature [ENVO:00002236]
local environmental context
ecological metagenome
metagenomic source
BIN541
metagenomic_bin
Bacillariophyceae sp.
organism
Global plastid metagenome-assembled genome
project name
SAMN15720688
sample derived from
Bacillariophyceae sp.
scientific_name
Ochrophyceae
taxonomic_placement
Sediment microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_West_2
title