PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300027846
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28386763
SRA accession
SRX2933535
SRA_experiment_ID
3300027846___IMGM3300027846_BIN12
Submitter Id
SPAdes;3.11.1; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
aquatic biome [ENVO:00002030]
broad-scale environmental context
2015-04-18
collection date
Plastid metagenome-assembled genome BIN12 from Vadose zone soil collected at USA: California, Eel River Critical Zone Observatory. Reconstructed through metagenomic binning.
description
water [ENVO:00002006]
environmental medium
USA
geographic location (country and/or sea)
39.7291 N
geographic location (latitude)
123.6419 W
geographic location (longitude)
Vadose zone soil
isolation_source
aquatic feature [ENVO:00002236]
local environmental context
ecological metagenome
metagenomic source
BIN12
metagenomic_bin
Streptophyta sp.
organism
Global plastid metagenome-assembled genome
project name
SAMN06343687
sample derived from
Streptophyta sp.
scientific_name
Streptophyceae
taxonomic_placement
Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes) (version 2)
title