PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300037312
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28386997
SRA accession
SRX30252955
SRA_experiment_ID
3300037312___IMGM3300037312_BIN508
Submitter Id
metaspades;3.13.0; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
aquatic biome [ENVO:00002030]
broad-scale environmental context
2018-11-28
collection date
Plastid metagenome-assembled genome BIN508 from EcoFAB chamber collected at USA: Walnut Creek, California. Reconstructed through metagenomic binning.
description
water [ENVO:00002006]
environmental medium
USA
geographic location (country and/or sea)
37.9315 N
geographic location (latitude)
122.0212 W
geographic location (longitude)
EcoFAB chamber
isolation_source
aquatic feature [ENVO:00002236]
local environmental context
ecological metagenome
metagenomic source
BIN508
metagenomic_bin
uncultured Trebouxiophyceae
organism
Global plastid metagenome-assembled genome
project name
SAMN18258190
sample derived from
uncultured Trebouxiophyceae
scientific_name
Chlorophyceae
taxonomic_placement
Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2
title