PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300025391
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28386572
SRA accession
SRX2565224
SRA_experiment_ID
3300025391___IMGM3300025391_BIN119
Submitter Id
SPAdes;3.11.1; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
freshwater biome [ENVO:01001357]
broad-scale environmental context
2009-06-08
collection date
Plastid metagenome-assembled genome BIN119 from Crystal Bog, Wisconsin, USA collected at USA: Crystal Bog, Wisconsin. Reconstructed through metagenomic binning.
description
freshwater [ENVO:00002011]
environmental medium
USA
geographic location (country and/or sea)
46.0072 N
geographic location (latitude)
89.6063 W
geographic location (longitude)
Crystal Bog, Wisconsin, USA
isolation_source
lake [ENVO:00000020]
local environmental context
ecological metagenome
metagenomic source
BIN119
metagenomic_bin
Raphidophyceae sp.
organism
Global plastid metagenome-assembled genome
project name
SAMN06267958
sample derived from
Raphidophyceae sp.
scientific_name
Ochrophyceae
taxonomic_placement
Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE08Jun09 (SPAdes) (version 2)
title