PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300021344
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28386453
SRA accession
SRX3948172
SRA_experiment_ID
3300021344___IMGM3300021344_BIN64
Submitter Id
SPAdes;3.11.1; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
aquatic biome [ENVO:00002030]
broad-scale environmental context
2016-08-09
collection date
Plastid metagenome-assembled genome BIN64 from Riparian zone, East River, Colorado collected at USA: East River, Colorado. Reconstructed through metagenomic binning.
description
water [ENVO:00002006]
environmental medium
USA
geographic location (country and/or sea)
38.9362 N
geographic location (latitude)
106.9425 W
geographic location (longitude)
Riparian zone, East River, Colorado
isolation_source
aquatic feature [ENVO:00002236]
local environmental context
ecological metagenome
metagenomic source
BIN64
metagenomic_bin
Streptophyta sp.
organism
Global plastid metagenome-assembled genome
project name
SAMN08779174
sample derived from
Streptophyta sp.
scientific_name
Streptophyceae
taxonomic_placement
Soil microbial communities from a riparian zone of the East river system, Colorado, United States - U2a2
title