PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300025147
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28386558
SRA accession
SRX2525376
SRA_experiment_ID
3300025147___IMGM3300025147_BIN407
Submitter Id
SPAdes;3.11.1; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
freshwater biome [ENVO:01001357]
broad-scale environmental context
2015-07-18
collection date
Plastid metagenome-assembled genome BIN407 from Glacier valley collected at Canada: Borup Fiord, Nunavut. Reconstructed through metagenomic binning.
description
freshwater [ENVO:00002011]
environmental medium
Canada
geographic location (country and/or sea)
81.017 N
geographic location (latitude)
81.583 W
geographic location (longitude)
Glacier valley
isolation_source
aquatic feature [ENVO:00002236]
local environmental context
ecological metagenome
metagenomic source
BIN407
metagenomic_bin
Xanthophyceae sp.
organism
Global plastid metagenome-assembled genome
project name
SAMN06264836
sample derived from
Xanthophyceae sp.
scientific_name
Ochrophyceae
taxonomic_placement
Glacier valley bacterial and archeal communities from Borup Fiord, Nunavut, Canada, to study Microbial Dark Matter (Phase II) - ​SSSS metaG (SPAdes) (version 3)
title