PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300043446
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28387102
SRA accession
SRX30290203, SRX30290202
SRA_experiment_ID
3300043446___IMGM3300043446_BIN543
Submitter Id
metaspades;3.14.1; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
freshwater biome [ENVO:01001357]
broad-scale environmental context
2019-08-05
collection date
Plastid metagenome-assembled genome BIN543 from river surface water collected at USA: New Kent, Virginia. Reconstructed through metagenomic binning.
description
freshwater [ENVO:00002011]
environmental medium
USA
geographic location (country and/or sea)
37.5728 N
geographic location (latitude)
77.0239 W
geographic location (longitude)
river surface water
isolation_source
aquatic feature [ENVO:00002236]
local environmental context
ecological metagenome
metagenomic source
BIN543
metagenomic_bin
uncultured Pedinophyceae
organism
Global plastid metagenome-assembled genome
project name
SAMN18247684
sample derived from
uncultured Pedinophyceae
scientific_name
Chlorophyceae
taxonomic_placement
Freshwater microbial communities from Pamunkey River, New Kent, Virginia, USA - pamunkeyriver_2019_sw_WHONDRS-S19S_0054 (Illumina-amplified)
title