PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300034166
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28386946
SRA accession
SRX7622041
SRA_experiment_ID
3300034166___IMGM3300034166_BIN653
Submitter Id
metaspades;3.13.0; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
freshwater biome [ENVO:01001357]
broad-scale environmental context
2012-09-13
collection date
Plastid metagenome-assembled genome BIN653 from lake surface water collected at USA: Wisconsin. Reconstructed through metagenomic binning.
description
freshwater [ENVO:00002011]
environmental medium
USA
geographic location (country and/or sea)
43.0995 N
geographic location (latitude)
89.4045 W
geographic location (longitude)
lake surface water
isolation_source
lake [ENVO:00000020]
local environmental context
ecological metagenome
metagenomic source
BIN653
metagenomic_bin
Prymnesiophyceae sp.
organism
Global plastid metagenome-assembled genome
project name
SAMN12796228
sample derived from
Prymnesiophyceae sp.
scientific_name
Haptophyceae
taxonomic_placement
Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Sep2012-rr0079
title