PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300045541
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28387129
SRA accession
SRX30468883
SRA_experiment_ID
3300045541___IMGM3300045541_BIN46
Submitter Id
metaspades;3.14.1; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
freshwater biome [ENVO:01001357]
broad-scale environmental context
2011-07-20
collection date
Plastid metagenome-assembled genome BIN46 from river surface water collected at USA: Nebraska. Reconstructed through metagenomic binning.
description
freshwater [ENVO:00002011]
environmental medium
USA
geographic location (country and/or sea)
41.0152 N
geographic location (latitude)
96.1577 W
geographic location (longitude)
river surface water
isolation_source
aquatic feature [ENVO:00002236]
local environmental context
ecological metagenome
metagenomic source
BIN46
metagenomic_bin
Bacillariophyceae sp.
organism
Global plastid metagenome-assembled genome
project name
SAMN51147005
sample derived from
Bacillariophyceae sp.
scientific_name
Ochrophyceae
taxonomic_placement
Freshwater microbial communities from Platte River, Nebraska, USA - NASQAN2011_433
title