PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300024954
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28386553
SRA accession
SRX2720606
SRA_experiment_ID
3300024954___IMGM3300024954_BIN21
Submitter Id
SPAdes;3.11.1; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
freshwater biome [ENVO:01001357]
broad-scale environmental context
2014-10-20
collection date
Plastid metagenome-assembled genome BIN21 from Freshwater sediment collected at USA: Lake Washington, Seattle, Washington. Reconstructed through metagenomic binning.
description
freshwater sediment [ENVO:00002144]
environmental medium
USA
geographic location (country and/or sea)
48.3807 N
geographic location (latitude)
122.1599 W
geographic location (longitude)
Freshwater sediment
isolation_source
lake [ENVO:00000020]
local environmental context
ecological metagenome
metagenomic source
BIN21
metagenomic_bin
uncultured Chrysophyceae
organism
Global plastid metagenome-assembled genome
project name
SAMN06267405
sample derived from
uncultured Chrysophyceae
scientific_name
Ochrophyceae
taxonomic_placement
Freshwater sediment methanotrophic microbial communities from Lake Washington under simulated oxygen tension - Sediment Metagenome 55_HOW8 (SPAdes)
title