PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300047565
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28387178
SRA accession
SRX30285531, SRX30285532
SRA_experiment_ID
3300047565___IMGM3300047565_BIN57
Submitter Id
metaspades;3.15.2; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
freshwater biome [ENVO:01001357]
broad-scale environmental context
2019-08-18
collection date
Plastid metagenome-assembled genome BIN57 from river surface water collected at USA: Logan, Utah. Reconstructed through metagenomic binning.
description
freshwater [ENVO:00002011]
environmental medium
USA
geographic location (country and/or sea)
41.7207 N
geographic location (latitude)
111.8864 W
geographic location (longitude)
river surface water
isolation_source
aquatic feature [ENVO:00002236]
local environmental context
ecological metagenome
metagenomic source
BIN57
metagenomic_bin
uncultured Cryptomonadaceae
organism
Global plastid metagenome-assembled genome
project name
SAMN18247681
sample derived from
uncultured Cryptomonadaceae
scientific_name
Cryptophyceae
taxonomic_placement
Freshwater microbial communities from Logan River, Logan, Utah, USA - logan1_2019_sw_WHONDRS-S19S_0097 (Nextera) (version 2)
title