PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300027900
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28387214
SRA accession
SRX2576265
SRA_experiment_ID
IMGM3300027900_BIN314
Submitter Id
SPAdes;3.11.1; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
freshwater biome [ENVO:01001357]
broad-scale environmental context
2012-06-04
collection date
Plastid metagenome-assembled genome  BIN314 from Freshwater lake sediment collected at USA: University of Notre Dame, Indiana. Reconstructed through metagenomic binning.
description
freshwater sediment [ENVO:00002144]
environmental medium
USA
geographic location (country and/or sea)
41.7 N
geographic location (latitude)
86.23 W
geographic location (longitude)
Freshwater lake sediment
isolation_source
lake [ENVO:00000020]
local environmental context
ecological metagenome
metagenomic source
BIN314
metagenomic_bin
Dictyochophyceae sp.
organism
Global plastid metagenome-assembled genome
project name
SAMN06267853
sample derived from
Dictyochophyceae sp.
scientific_name
Ochrophyceae
taxonomic_placement
Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes) (version 2)
title