PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300049207
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28387188
SRA accession
SRX30323589
SRA_experiment_ID
3300049207___IMGM3300049207_BIN112
Submitter Id
metaspades;3.15.2; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
aquatic biome [ENVO:00002030]
broad-scale environmental context
2019-10-21
collection date
Plastid metagenome-assembled genome BIN112 from Rhizosphere soil collected at USA: Davis, California. Reconstructed through metagenomic binning.
description
water [ENVO:00002006]
environmental medium
USA
geographic location (country and/or sea)
38.5326 N
geographic location (latitude)
121.783 W
geographic location (longitude)
Rhizosphere soil
isolation_source
aquatic feature [ENVO:00002236]
local environmental context
ecological metagenome
metagenomic source
BIN112
metagenomic_bin
Streptophyta sp.
organism
Global plastid metagenome-assembled genome
project name
SAMN18245675
sample derived from
Streptophyta sp.
scientific_name
Streptophyceae
taxonomic_placement
Soil microbial communities from California, United States - E26_B_RS (version 2)
title