PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300019749
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28386352
SRA accession
SRX3983241
SRA_experiment_ID
3300019749___IMGM3300019749_BIN6
Submitter Id
MEGAHIT;1.0.6; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
freshwater biome [ENVO:01001357]
broad-scale environmental context
2016-11-16
collection date
Plastid metagenome-assembled genome BIN6 from river freshwater collected at USA: Delaware. Reconstructed through metagenomic binning.
description
freshwater sediment [ENVO:00002144]
environmental medium
USA
geographic location (country and/or sea)
38.7906 N
geographic location (latitude)
75.1638 W
geographic location (longitude)
river freshwater
isolation_source
aquatic feature [ENVO:00002236]
local environmental context
ecological metagenome
metagenomic source
BIN6
metagenomic_bin
Bacillariophyceae sp.
organism
Global plastid metagenome-assembled genome
project name
SAMN08779236
sample derived from
Bacillariophyceae sp.
scientific_name
Ochrophyceae
taxonomic_placement
Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States - BLT_4-5_MG
title