PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300000117
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28386222
SRA accession
3300000117___IMGM3300000117_BIN420
Submitter Id
SOAPdenovo;1.05;Newbler;2.8;Minimus2; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
marine biome [ENVO:00000447]
broad-scale environmental context
2010-12-13
collection date
Plastid metagenome-assembled genome BIN420 from Marine collected at USA: Microbial Observatory off the coast of Delaware. Reconstructed through metagenomic binning.
description
sea water [ENVO:00002149]
environmental medium
USA
geographic location (country and/or sea)
38.84917 N
geographic location (latitude)
75.1076 W
geographic location (longitude)
Marine
isolation_source
neritic zone [ENVO:00000209]
local environmental context
ecological metagenome
metagenomic source
BIN420
metagenomic_bin
uncultured Mamiellophyceae
organism
Global plastid metagenome-assembled genome
project name
SAMN05518585
sample derived from
uncultured Mamiellophyceae
scientific_name
Chlorophyceae
taxonomic_placement
Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010
title