PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300048837
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28392276
SRA accession
missing
SRA_experiment_ID
3300048837___Ga0498921_0001595
Submitter Id
metaspades;3.15.2
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
marine biome [ENVO:00000447]
broad-scale environmental context
2018-08-14
collection date
Plastid metagenome-assembled genome from brackish wetland sediment from marine intertidal zone collected at salt marsh sediment at San Jose, California, USA. Reconstructed through metagenomic binning.
description
sea water [ENVO:00002149]
environmental medium
USA
geographic location (country and/or sea)
37.4276 N
geographic location (latitude)
121.9387 W
geographic location (longitude)
Brackish wetland sediment
isolation_source
intertidal zone [ENVO:00000316]
local environmental context
ecological metagenome
metagenomic source
uncultured Chlorophyceae
organism
Global plastid metagenome-assembled genome
project name
missing
sample derived from
uncultured Chlorophyceae
scientific_name
Chlorophyceae
taxonomic_placement
Sediment microbial communities from brackish wetlands in San Jose, California, USA - ROC9_1
title