PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300036977
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28386987
SRA accession
SRX8398541
SRA_experiment_ID
3300036977___IMGM3300036977_BIN84
Submitter Id
metaspades;3.13.0; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
freshwater biome [ENVO:01001357]
broad-scale environmental context
2016-06-30
collection date
Plastid metagenome-assembled genome BIN84 from sediment from eutrophic lake collected at Switzerland: Zurich. Reconstructed through metagenomic binning.
description
freshwater sediment [ENVO:00002144]
environmental medium
Switzerland
geographic location (country and/or sea)
47.3519 N
geographic location (latitude)
8.6747 E
geographic location (longitude)
sediment from eutrophic lake
isolation_source
lake [ENVO:00000020]
local environmental context
ecological metagenome
metagenomic source
BIN84
metagenomic_bin
Bacillariophyceae sp.
organism
Global plastid metagenome-assembled genome
project name
SAMN14511329
sample derived from
Bacillariophyceae sp.
scientific_name
Ochrophyceae
taxonomic_placement
Sediment microbial communities from Lake Greifen, Zurich, Switzerland - LG_0.25
title