PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300043413
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28387096
SRA accession
SRX30290276
SRA_experiment_ID
3300043413___IMGM3300043413_BIN29
Submitter Id
metaspades;3.14.1; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
freshwater biome [ENVO:01001357]
broad-scale environmental context
2019-08-13
collection date
Plastid metagenome-assembled genome BIN29 from river surface water collected at Puerto Rico: Adjuntas, Adjuntas. Reconstructed through metagenomic binning.
description
freshwater [ENVO:00002011]
environmental medium
Puerto Rico
geographic location (country and/or sea)
18.1741 N
geographic location (latitude)
66.7996 W
geographic location (longitude)
river surface water
isolation_source
aquatic feature [ENVO:00002236]
local environmental context
ecological metagenome
metagenomic source
BIN29
metagenomic_bin
Bacillariophyceae sp.
organism
Global plastid metagenome-assembled genome
project name
SAMN18244774
sample derived from
Bacillariophyceae sp.
scientific_name
Ochrophyceae
taxonomic_placement
Freshwater microbial communities from Rio Guilarte, Adjuntas, Adjuntas, Puerto Rico - guil_2019_sw_WHONDRS-S19S_0049
title