PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300021961
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28386470
SRA accession
SRX4051814
SRA_experiment_ID
3300021961___IMGM3300021961_BIN601
Submitter Id
SPAdes;3.11.1; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
marine biome [ENVO:00000447]
broad-scale environmental context
2013-10-25
collection date
Plastid metagenome-assembled genome BIN601 from Water column collected at USA: California. Reconstructed through metagenomic binning.
description
sea water [ENVO:00002149]
environmental medium
USA
geographic location (country and/or sea)
38.0516 N
geographic location (latitude)
121.88 W
geographic location (longitude)
Water column
isolation_source
aquatic feature [ENVO:00002236]
local environmental context
ecological metagenome
metagenomic source
BIN601
metagenomic_bin
uncultured Trebouxiophyceae
organism
Global plastid metagenome-assembled genome
project name
SAMN08769308
sample derived from
uncultured Trebouxiophyceae
scientific_name
Chlorophyceae
taxonomic_placement
Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D
title