PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300025113
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28387205
SRA accession
SRX2948616
SRA_experiment_ID
IMGM3300025113_BIN62
Submitter Id
SPAdes;3.11.1; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
aquatic biome [ENVO:00002030]
broad-scale environmental context
2015-07-05
collection date
Plastid metagenome-assembled genome  BIN62 from Lower Cold Creek, Nevada collected at USA: Cold Creek, Nevada. Reconstructed through metagenomic binning.
description
water [ENVO:00002006]
environmental medium
USA
geographic location (country and/or sea)
36.42 N
geographic location (latitude)
115.74 W
geographic location (longitude)
Lower Cold Creek, Nevada
isolation_source
aquatic feature [ENVO:00002236]
local environmental context
ecological metagenome
metagenomic source
BIN62
metagenomic_bin
Bacillariophyceae sp.
organism
Global plastid metagenome-assembled genome
project name
SAMN06264412
sample derived from
Bacillariophyceae sp.
scientific_name
Ochrophyceae
taxonomic_placement
Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Lower Cold Creek (SPAdes) (version 3)
title