PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300003847
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28386242
SRA accession
SRX2581073
SRA_experiment_ID
3300003847___IMGM3300003847_BIN35
Submitter Id
SOAPdenovo;1.05;Newbler;2.8;Minimus2; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
marine biome [ENVO:00000447]
broad-scale environmental context
2014-03-11
collection date
Plastid metagenome-assembled genome BIN35 from Helgoland, North Sea, Atlantic Ocean collected at Germany: Helgoland, North Sea. Reconstructed through metagenomic binning.
description
sea water [ENVO:00002149]
environmental medium
Germany
geographic location (country and/or sea)
53.9944 N
geographic location (latitude)
6.8905 E
geographic location (longitude)
Helgoland, North Sea, Atlantic Ocean
isolation_source
neritic zone [ENVO:00000209]
local environmental context
ecological metagenome
metagenomic source
BIN35
metagenomic_bin
Bacillariophyceae sp.
organism
Global plastid metagenome-assembled genome
project name
SAMN06267522
sample derived from
Bacillariophyceae sp.
scientific_name
Ochrophyceae
taxonomic_placement
Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - COGITO 998_met_11
title