PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300022309
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28387202
SRA accession
SRX4054601
SRA_experiment_ID
IMGM3300022309_BIN44
Submitter Id
SPAdes;3.11.1; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
marine biome [ENVO:00000447]
broad-scale environmental context
2012-05-22
collection date
Plastid metagenome-assembled genome  BIN44 from bay sediment collected at USA: California. Reconstructed through metagenomic binning.
description
sea water [ENVO:00002149]
environmental medium
USA
geographic location (country and/or sea)
38.05 N
geographic location (latitude)
121.934 W
geographic location (longitude)
bay sediment
isolation_source
aquatic feature [ENVO:00002236]
local environmental context
ecological metagenome
metagenomic source
BIN44
metagenomic_bin
Bacillariophyceae sp.
organism
Global plastid metagenome-assembled genome
project name
SAMN08769329
sample derived from
Bacillariophyceae sp.
scientific_name
Ochrophyceae
taxonomic_placement
Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_4_1
title