PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300020527
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28386383
SRA accession
SRX1989911
SRA_experiment_ID
3300020527___IMGM3300020527_BIN91
Submitter Id
SPAdes;3.11.1; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
freshwater biome [ENVO:01001357]
broad-scale environmental context
2012-08-23
collection date
Plastid metagenome-assembled genome BIN91 from Lake Mendota, Madison, Wisconsin, USA collected at USA: Lake Mendota, Madison, Wisconsin. Reconstructed through metagenomic binning.
description
freshwater [ENVO:00002011]
environmental medium
USA
geographic location (country and/or sea)
43.098333 N
geographic location (latitude)
89.405278 W
geographic location (longitude)
Lake Mendota, Madison, Wisconsin, USA
isolation_source
lake [ENVO:00000020]
local environmental context
ecological metagenome
metagenomic source
BIN91
metagenomic_bin
uncultured Trebouxiophyceae
organism
Global plastid metagenome-assembled genome
project name
SAMN05422253
sample derived from
uncultured Trebouxiophyceae
scientific_name
Chlorophyceae
taxonomic_placement
Freshwater microbial communities from Lake Mendota, WI - 24AUG2012 deep hole epilimnion (SPAdes)
title