PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300013873
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28386340
SRA accession
3300013873___IMGM3300013873_BIN11
Submitter Id
MEGAHIT;1.0.3;SPAdes;3.10.0; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
aquatic biome [ENVO:00002030]
broad-scale environmental context
2014-05-13
collection date
Plastid metagenome-assembled genome BIN11 from gowning area floor collected at USA: Jet Propulsion Laboratory, Pasadena, California. Reconstructed through metagenomic binning.
description
water [ENVO:00002006]
environmental medium
USA
geographic location (country and/or sea)
34.1 N
geographic location (latitude)
118.1 W
geographic location (longitude)
gowning area floor
isolation_source
aquatic feature [ENVO:00002236]
local environmental context
ecological metagenome
metagenomic source
BIN11
metagenomic_bin
Streptophyta sp.
organism
Global plastid metagenome-assembled genome
project name
SAMN09091504
sample derived from
Streptophyta sp.
scientific_name
Streptophyceae
taxonomic_placement
Clean room microbial communities from NASA Spacecraft Assembly Facility at Jet Propulsion Laboratory, Pasadena, California, USA - InSight In2-11 gowning area SPAdes reassembly (version 2)
title