PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300027617
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28386706
SRA accession
SRX2574890
SRA_experiment_ID
3300027617___IMGM3300027617_BIN24
Submitter Id
SPAdes;3.11.1; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
aquatic biome [ENVO:00002030]
broad-scale environmental context
2014-01-08
collection date
Plastid metagenome-assembled genome BIN24 from Arabidopsis thaliana rhizosphere collected at USA: Walnut Creek, California. Reconstructed through metagenomic binning.
description
water [ENVO:00002006]
environmental medium
USA
geographic location (country and/or sea)
37.931388 N
geographic location (latitude)
122.021761 W
geographic location (longitude)
Arabidopsis thaliana rhizosphere
isolation_source
aquatic feature [ENVO:00002236]
local environmental context
ecological metagenome
metagenomic source
BIN24
metagenomic_bin
Streptophyta sp.
organism
Global plastid metagenome-assembled genome
project name
SAMN06267767
sample derived from
Streptophyta sp.
scientific_name
Streptophyceae
taxonomic_placement
Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes) (version 2)
title