PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300027761
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28386727
SRA accession
SRX2122696
SRA_experiment_ID
3300027761___IMGM3300027761_BIN20
Submitter Id
SPAdes;3.11.1; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
aquatic biome [ENVO:00002030]
broad-scale environmental context
2012-05-30
collection date
Plastid metagenome-assembled genome BIN20 from Agave collected at Mexico: Guanajuato. Reconstructed through metagenomic binning.
description
water [ENVO:00002006]
environmental medium
Mexico
geographic location (country and/or sea)
21.7658 N
geographic location (latitude)
100.163 W
geographic location (longitude)
Agave
isolation_source
aquatic feature [ENVO:00002236]
local environmental context
ecological metagenome
metagenomic source
BIN20
metagenomic_bin
Streptophyta sp.
organism
Global plastid metagenome-assembled genome
project name
SAMN05720244
sample derived from
Streptophyta sp.
scientific_name
Streptophyceae
taxonomic_placement
Agave microbial communities from Guanajuato, Mexico - As.Sf.rz (SPAdes) (version 2)
title