PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300046819
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28387154
SRA accession
SRX30287379, SRX30287380
SRA_experiment_ID
3300046819___IMGM3300046819_BIN62
Submitter Id
metaspades;3.15.2; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
freshwater biome [ENVO:01001357]
broad-scale environmental context
2019-08-12
collection date
Plastid metagenome-assembled genome BIN62 from river surface water collected at USA: Cross Plains, Wisconsin. Reconstructed through metagenomic binning.
description
freshwater [ENVO:00002011]
environmental medium
USA
geographic location (country and/or sea)
43.1091 N
geographic location (latitude)
89.6403 W
geographic location (longitude)
river surface water
isolation_source
aquatic feature [ENVO:00002236]
local environmental context
ecological metagenome
metagenomic source
BIN62
metagenomic_bin
Raphidophyceae sp.
organism
Global plastid metagenome-assembled genome
project name
SAMN18245972
sample derived from
Raphidophyceae sp.
scientific_name
Ochrophyceae
taxonomic_placement
Freshwater microbial communities from Black Earth Creek, Cross Plains, Wisconsin, USA - blackearthcreek_2019_sw_WHONDRS-S19S_0061 (Nextera) (version 2)
title