PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300027759
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28386726
SRA accession
SRX2996442
SRA_experiment_ID
3300027759___IMGM3300027759_BIN1299
Submitter Id
SPAdes;3.11.1; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
freshwater biome [ENVO:01001357]
broad-scale environmental context
2013-02-06
collection date
Plastid metagenome-assembled genome BIN1299 from Lake Simoncouche, Canada collected at Canada: Lake Simoncouche. Reconstructed through metagenomic binning.
description
freshwater [ENVO:00002011]
environmental medium
Canada
geographic location (country and/or sea)
48.2311 N
geographic location (latitude)
71.2508 W
geographic location (longitude)
Lake Simoncouche, Canada
isolation_source
lake [ENVO:00000020]
local environmental context
ecological metagenome
metagenomic source
BIN1299
metagenomic_bin
Prymnesiophyceae sp.
organism
Global plastid metagenome-assembled genome
project name
SAMN06267260
sample derived from
Prymnesiophyceae sp.
scientific_name
Haptophyceae
taxonomic_placement
Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes) (version 2)
title