PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300021185
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28386452
SRA accession
SRX4010483
SRA_experiment_ID
3300021185___IMGM3300021185_BIN496
Submitter Id
SPAdes;3.10.1; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
marine biome [ENVO:00000447]
broad-scale environmental context
2015-04-30
collection date
Plastid metagenome-assembled genome BIN496 from marine water column collected at USA: California. Reconstructed through metagenomic binning.
description
sea water [ENVO:00002149]
environmental medium
USA
geographic location (country and/or sea)
36.6907 N
geographic location (latitude)
122.3448 W
geographic location (longitude)
marine water column
isolation_source
intertidal zone [ENVO:00000316]
local environmental context
ecological metagenome
metagenomic source
BIN496
metagenomic_bin
uncultured Geminigeraceae
organism
Global plastid metagenome-assembled genome
project name
SAMN08776800
sample derived from
uncultured Geminigeraceae
scientific_name
Chlorophyceae
taxonomic_placement
Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015
title