PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300026266
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28386678
SRA accession
SRX2782418
SRA_experiment_ID
3300026266___IMGM3300026266_BIN251
Submitter Id
SPAdes;3.11.1; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
marine biome [ENVO:00000447]
broad-scale environmental context
2014-05-29
collection date
Plastid metagenome-assembled genome BIN251 from Seawater from oxygen minimum zone collected at Pacific Ocean: Eastern Tropical North Pacific. Reconstructed through metagenomic binning.
description
sea water [ENVO:00002149]
environmental medium
Pacific Ocean
geographic location (country and/or sea)
missing
geographic location (latitude)
missing
geographic location (longitude)
Seawater from oxygen minimum zone
isolation_source
oceanic zone [ENVO:00000033]
local environmental context
ecological metagenome
metagenomic source
BIN251
metagenomic_bin
Dictyochophyceae sp.
organism
Global plastid metagenome-assembled genome
project name
SAMN06344158
sample derived from
Dictyochophyceae sp.
scientific_name
Ochrophyceae
taxonomic_placement
Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV257 (SPAdes) (version 2)
title