PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300031884
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28386881
SRA accession
SRX7891209
SRA_experiment_ID
3300031884___IMGM3300031884_BIN486
Submitter Id
SPAdes;3.12.0; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
freshwater biome [ENVO:01001357]
broad-scale environmental context
2018-06-04
collection date
Plastid metagenome-assembled genome BIN486 from Trout Bog Lake water collected at USA: Wisconsin. Reconstructed through metagenomic binning.
description
freshwater [ENVO:00002011]
environmental medium
USA
geographic location (country and/or sea)
46.0411 N
geographic location (latitude)
89.6861 W
geographic location (longitude)
Trout Bog Lake water
isolation_source
lake [ENVO:00000020]
local environmental context
ecological metagenome
metagenomic source
BIN486
metagenomic_bin
Raphidophyceae sp.
organism
Global plastid metagenome-assembled genome
project name
SAMN14297261
sample derived from
Raphidophyceae sp.
scientific_name
Ochrophyceae
taxonomic_placement
Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18005
title