2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
Roseeta Mutum and Sudripta Das, BRIC-IBSD
INSDC center name
public
INSDC status
ERS25327579
SRA accession
SAMIN0021925-Identification of microRNAs involved in regulation of metabolic pathways of Allium hookeri
Submitter Id
30°C
air temperature regimen
IBDC
broker name
2008-06-10
collection date
To identify miRNAs, the prediction of secondary hairpin structure is necessary. Since A. hookeri has no genome sequence available, it is difficult to predict MIR precursor sequences. Thus we generate the transcriptome of A. hookeri and performed de novo assembly and identify unigenes of the species. These can be utilized as reference sequences for identification of A. hookeri miRNAs.
description
India
geographic location (country and/or sea)
24.786283° N
geographic location (latitude)
93.849683° E
geographic location (longitude)
soil
isolation and growth condition
Allium hookeri
organism
mature
plant developmental stage
hermaphrodite
plant sex
whole plant
plant structure
diploid
ploidy
Allium hookeri
scientific_name
Identification of microRNAs involved in regulation of metabolic pathways of Allium hookeri
title