PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300042014
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28387051
SRA accession
SRX14829263
SRA_experiment_ID
3300042014___IMGM3300042014_BIN42
Submitter Id
metaspades;3.14.1; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
aquatic biome [ENVO:00002030]
broad-scale environmental context
2017-07-07
collection date
Plastid metagenome-assembled genome BIN42 from Sorghum rhizosphere collected at USA: Nebraska. Reconstructed through metagenomic binning.
description
water [ENVO:00002006]
environmental medium
USA
geographic location (country and/or sea)
41.8942 N
geographic location (latitude)
103.685 W
geographic location (longitude)
Sorghum rhizosphere
isolation_source
aquatic feature [ENVO:00002236]
local environmental context
ecological metagenome
metagenomic source
BIN42
metagenomic_bin
Streptophyta sp.
organism
Global plastid metagenome-assembled genome
project name
SAMN17674781
sample derived from
Streptophyta sp.
scientific_name
Streptophyceae
taxonomic_placement
Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275
title