PRJEB106049
Accession
2025-12-30
ENA first public
ERC000011
ENA-CHECKLIST
3300022739
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28386479
SRA accession
SRX4498681
SRA_experiment_ID
3300022739___IMGM3300022739_BIN70
Submitter Id
SPAdes;3.11.1; default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
aquatic biome [ENVO:00002030]
broad-scale environmental context
2017-07-10
collection date
Plastid metagenome-assembled genome BIN70 from plant root nodules collected at USA: California. Reconstructed through metagenomic binning.
description
water [ENVO:00002006]
environmental medium
USA
geographic location (country and/or sea)
34.0136 N
geographic location (latitude)
118.4673 W
geographic location (longitude)
plant root nodules
isolation_source
aquatic feature [ENVO:00002236]
local environmental context
ecological metagenome
metagenomic source
BIN70
metagenomic_bin
Streptophyta sp.
organism
Global plastid metagenome-assembled genome
project name
SAMN09201715
sample derived from
Streptophyta sp.
scientific_name
Streptophyceae
taxonomic_placement
Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - brown nodules
title