Yes
16S recovered
Infernal: 1.1.5
16S recovery software
2026-01-05
ENA first public
ERC000050
ENA-CHECKLIST
Tree of Life Programme
INSDC center name
public
INSDC status
minimap2: 2.29-r1283; coverm: 0.7.0
MAG coverage software
ERS28439007
SRA accession
454f519c-adcb-4c6e-a204-210b2d494a65
Submitter Id
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly quality
metamdbg: 1.2
assembly software
graph; coverage; hic-mapping
binning parameters
dastool: 1.1.7; bin3c: 0.3.3; metator: 1.3.10; maxbin2: 2.2.7; metabat2: 2.17
binning software
aquatic biome
broad-scale environmental context
2024-03-01
collection date
97.18
%
completeness score
checkm2: 1.1.0
completeness software
1.65
%
contamination score
10
m
depth
adult sponge tissue
environmental medium
Australia
geographic location (country and/or sea)
-33.99
DD
geographic location (latitude)
151.23
DD
geographic location (longitude)
Haplosclerida sp. GHC0000330
host scientific name
3378732
host taxid
metagenome-assembled genome
investigation type
Sponge: Haplosclerida sp. GHC0000330
isolation_source
marine biome
local environmental context
sponge metagenome
metagenomic source
23
number of standard tRNAs extracted
Bdellovibrionia bacterium
organism
ASG
project name
SAMEA120903507
sample derived from
Bdellovibrionia bacterium
scientific_name
PacBio Revio; Illumina NovaSeqX; Illumina NovaSeqX
sequencing method
tRNAscan-SE: 2.0.12
tRNA extraction software
GTDB-Tk: 2.5.2; GTDB DB: r226
taxonomic classification
taxonomic novelty determined using RED
taxonomic identity marker
454f519c-adcb-4c6e-a204-210b2d494a65-asg-odHalSpea1_metamdbg_dastool_23
title
odHalSpea1.Bdellovibrionia_1
tolid