SAMN54314992
External Id
CSIR-National Institute of Oceanography
INSDC center name
2026-01-02T00:50:31.397Z
INSDC first public
2026-01-02T00:50:31.397Z
INSDC last update
SRS27591893
INSDC secondary accession
live
INSDC status
Metagenome or environmental
NCBI submission model
Metagenome.environmental.1.0
NCBI submission package
SRS27591893
SRA accession
2024-06-27
collection_date
Shotgun metagenomic sequencing of coastal zooplankton community from the Bay of Bengal, Indian Ocean, aimed at assessing species diversity and functional gene composition.
description
Indian Ocean: Bay of Bengal
geo_loc_name
Zooplankton community collected from surface coastal waters (~2 m depth)
isolation_source
17.679972 N 83.339139 E
lat_lon
metagenome
http://purl.obolibrary.org/obo/NCBITaxon_256318
organism
Working Party plankton net with 50 cm mouth diameter and 200 m mesh size, towed horizontally, preserved in molecular-grade ethanol at 4 C.
samp_collect_device
Genomic DNA extracted using the Xploregene gDNA Extraction Kit. Illumina HiSeq 4000 platform was used to sequence libraries.
samp_mat_process
500 ml filtered seawater
samp_size
Station V3
source_material_id
Shotgun metagenomic dataset of zooplankton from coastal waters of the Bay of Bengal
title