PRJEB106049
Accession
2026-01-07
ENA first public
ERC000011
ENA-CHECKLIST
d__Bacteria;p__Cyanobacteriota;c__Cyanobacteriia;o__PCC-6307;f__Cyanobiaceae;g__Parasynechococcus;s__Parasynechococcus sp013911515
GTDBK_classification
3300046171
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28403004
SRA accession
SRX27617951
SRA_experimentID
ERP187154
Secondary Accession
IMGM3300046171_BIN2089
Submitter Id
metaFlye;2.8.1-b1676;default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
marine biome [ENVO:00000447]
broad-scale environmental context
2019-10-02
collection date
78.61%
completeness score
CheckM2
completeness software
2.09%
contamination score
Cyanobacteriota metagenome-assembled genome BIN2089 from Coastal surface water collected at USA: Newport_PBmetag_191002.NPB. Reconstructed through metagenomic binning.
description
sea water [ENVO:00002149]
environmental medium
USA
geographic location (country and/or sea)
33.6062 N
geographic location (latitude)
117.9312 W
geographic location (longitude)
Coastal surface water
isolation_source
intertidal zone [ENVO:00000316]
local environmental context
ecological metagenome
metagenomic source
BIN2089
metagenomic_bin
uncultured cyanobacterium
organism
SAMN46724718
sample derived from
uncultured cyanobacterium
scientific_name
PacBio Sequel II
sequencing method
Seawater microbial communities from Southern California Bight, CA, United States - Newport_PBmetag_191002.NPB
title