PRJEB106049
Accession
2026-01-07
ENA first public
ERC000011
ENA-CHECKLIST
d__Bacteria;p__Cyanobacteriota;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Halomicronema;s__
GTDBK_classification
3300006016
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28403038
SRA accession
SRX2575227, SRX2575230, SRX2575228, SRX2995877, SRX2575231, SRX2995878, SRX2575229
SRA_experimentID
ERP187154
Secondary Accession
IMGM3300006016_BIN57
Submitter Id
spades;3.1.0;default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
saline biome [ENVO:01000253]
broad-scale environmental context
2014-12-15
collection date
99.67%
completeness score
CheckM2
completeness software
0.17%
contamination score
Cyanobacteriota metagenome-assembled genome BIN57 from Hot Lake, Washington, USA collected at USA: Hot Lake Consortium UCC-R28 (version 3) (version 3). Reconstructed through metagenomic binning.
description
saline water [ENVO:00002010]
environmental medium
USA
geographic location (country and/or sea)
48.972613 N
geographic location (latitude)
119.477608 W
geographic location (longitude)
Hot Lake, Washington, USA
isolation_source
saline lake [ENVO:00000871]
local environmental context
ecological metagenome
metagenomic source
BIN57
metagenomic_bin
uncultured cyanobacterium
organism
SAMN06267784
sample derived from
uncultured cyanobacterium
scientific_name
Illumina HiSeq 2500, PacBio Sequel, PacBio RS II
sequencing method
Hypersaline microbial mat communities from Hot Lake, Washington, USA - Hot Lake Consortium UCC-R28 (version 3) (version 3)
title