PRJEB106049
Accession
2026-01-07
ENA first public
ERC000011
ENA-CHECKLIST
d__Bacteria;p__Cyanobacteriota;c__Vampirovibrionia;o__Obscuribacterales;f__Obscuribacteraceae;g__QKMZ01;s__
GTDBK_classification
3300049222
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28402722
SRA accession
SRX27618705
SRA_experimentID
ERP187154
Secondary Accession
IMGM3300049222_BIN473
Submitter Id
metaspades;3.15.2;default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
marine biome [ENVO:00000447]
broad-scale environmental context
2018-08-22
collection date
90.93%
completeness score
CheckM2
completeness software
2.19%
contamination score
Cyanobacteriota metagenome-assembled genome BIN473 from untreated coastal surface water collected at USA: Newport_SRmetag_180822.NP2. Reconstructed through metagenomic binning.
description
sea water [ENVO:00002149]
environmental medium
USA
geographic location (country and/or sea)
33.6062 N
geographic location (latitude)
117.9312 W
geographic location (longitude)
untreated coastal surface water
isolation_source
intertidal zone [ENVO:00000316]
local environmental context
ecological metagenome
metagenomic source
BIN473
metagenomic_bin
uncultured bacterium
organism
SAMN46724880
sample derived from
uncultured bacterium
scientific_name
Illumina NovaSeq S4
sequencing method
Seawater microbial communities from Southern California Bight, CA, United States - Newport_SRmetag_180822.NP2
title