PRJEB106049
Accession
2026-01-07
ENA first public
ERC000011
ENA-CHECKLIST
d__Bacteria;p__Cyanobacteriota;c__Cyanobacteriia;o__PCC-6307;f__Cyanobiaceae;g__Vulcanococcus;s__
GTDBK_classification
3300043419
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28403029
SRA accession
SRX30289602, SRX30289601
SRA_experimentID
ERP187154
Secondary Accession
IMGM3300043419_BIN519
Submitter Id
metaspades;3.14.1;default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
freshwater biome [ENVO:01001357]
broad-scale environmental context
2019-09-06
collection date
52.13%
completeness score
CheckM2
completeness software
0%
contamination score
Cyanobacteriota metagenome-assembled genome BIN519 from river surface water collected at USA: umpqua_2019_sw_WHONDRS-S19S_0079 (Illumina-amplified). Reconstructed through metagenomic binning.
description
freshwater [ENVO:00002011]
environmental medium
USA
geographic location (country and/or sea)
43.6367 N
geographic location (latitude)
123.5719 W
geographic location (longitude)
river surface water
isolation_source
river [ENVO:00000022]
local environmental context
ecological metagenome
metagenomic source
BIN519
metagenomic_bin
uncultured cyanobacterium
organism
SAMN18248260
sample derived from
uncultured cyanobacterium
scientific_name
Illumina NovaSeq S4
sequencing method
Freshwater microbial communities from Umpqua River, Elkton, Oregon, USA - umpqua_2019_sw_WHONDRS-S19S_0079 (Illumina-amplified)
title