PRJEB106049
Accession
2026-01-07
ENA first public
ERC000011
ENA-CHECKLIST
d__Bacteria;p__Cyanobacteriota;c__Vampirovibrionia;o__LMEP-6097;f__LMEP-6097;g__LMEP-6097;s__LMEP-6097 sp005110385
GTDBK_classification
3300037517
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28402688
SRA accession
SRX9139778
SRA_experimentID
ERP187154
Secondary Accession
IMGM3300037517_BIN1195
Submitter Id
metaspades;3.13.0;default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
freshwater biome [ENVO:01001357]
broad-scale environmental context
2014-08-25
collection date
89.72%
completeness score
CheckM2
completeness software
0.32%
contamination score
Cyanobacteriota metagenome-assembled genome BIN1195 from lake surface water collected at USA: TYMEFLIES-ME25Aug2014-rr0139. Reconstructed through metagenomic binning.
description
freshwater [ENVO:00002011]
environmental medium
USA
geographic location (country and/or sea)
43.0995 N
geographic location (latitude)
89.4045 W
geographic location (longitude)
lake surface water
isolation_source
lake [ENVO:00000020]
local environmental context
ecological metagenome
metagenomic source
BIN1195
metagenomic_bin
uncultured bacterium
organism
SAMN15739085
sample derived from
uncultured bacterium
scientific_name
Illumina NovaSeq
sequencing method
Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Aug2014-rr0139
title