PRJEB106049
Accession
2026-01-07
ENA first public
ERC000011
ENA-CHECKLIST
d__Bacteria;p__Cyanobacteriota;c__Cyanobacteriia;o__Cyanobacteriales;f__Microcoleaceae;g__JAAURB01;s__
GTDBK_classification
3300025130
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28402804
SRA accession
SRX2948572
SRA_experimentID
ERP187154
Secondary Accession
IMGM3300025130_BIN156
Submitter Id
SPAdes;3.11.1;default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
freshwater biome [ENVO:01001357]
broad-scale environmental context
2014-12-13
collection date
99.99%
completeness score
CheckM2
completeness software
0.16%
contamination score
Cyanobacteriota metagenome-assembled genome BIN156 from Ash Meadows Crystal Spring, Amargosa Valley, Nevada collected at USA: Ash Meadows Crystal Spring (SPAdes) (version 3). Reconstructed through metagenomic binning.
description
freshwater [ENVO:00002011]
environmental medium
USA
geographic location (country and/or sea)
36.42 N
geographic location (latitude)
116.32 W
geographic location (longitude)
Ash Meadows Crystal Spring, Amargosa Valley, Nevada
isolation_source
groundwater [ENVO:01001004]
local environmental context
ecological metagenome
metagenomic source
BIN156
metagenomic_bin
uncultured cyanobacterium
organism
SAMN06264748
sample derived from
uncultured cyanobacterium
scientific_name
Illumina HiSeq 2500-1TB
sequencing method
Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Crystal Spring (SPAdes) (version 3)
title