PRJEB106049
Accession
2026-01-07
ENA first public
ERC000011
ENA-CHECKLIST
d__Bacteria;p__Cyanobacteriota;c__Vampirovibrionia;o__Gastranaerophilales;f__Gastranaerophilaceae;g__CAG-196;s__
GTDBK_classification
3300021256
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28402657
SRA accession
ERP187154
Secondary Accession
IMGM3300021256_BIN1988
Submitter Id
SPAdes;3.11.0;default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
organismal entity [ENVO:01000128]
broad-scale environmental context
2011-06-28
collection date
74.44%
completeness score
CheckM2
completeness software
1.83%
contamination score
Cyanobacteriota metagenome-assembled genome BIN1988 from New Zealand collected at New Zealand: Tag 1283 SPADES assembly. Reconstructed through metagenomic binning.
description
rumen content [ENVO:02000035]
environmental medium
New Zealand
geographic location (country and/or sea)
42.26 S
geographic location (latitude)
171.6 E
geographic location (longitude)
New Zealand
isolation_source
rumen [UBERON:0001988]
local environmental context
ecological metagenome
metagenomic source
BIN1988
metagenomic_bin
uncultured bacterium
organism
SAMN18259523
sample derived from
uncultured bacterium
scientific_name
missing
sequencing method
Sheep rumen microbial communities from New Zealand - Tag 1283 SPADES assembly
title