PRJEB106049
Accession
2026-01-07
ENA first public
ERC000011
ENA-CHECKLIST
d__Bacteria;p__Cyanobacteriota;c__Cyanobacteriia;o__Cyanobacteriales;f__Microcoleaceae;g__Microcoleus;s__
GTDBK_classification
3300038997
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28402813
SRA accession
ERX1273394
SRA_experimentID
ERP187154
Secondary Accession
IMGM3300038997_BIN16
Submitter Id
Custom JGI assembly v. Nielsen et. al.;default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
freshwater biome [ENVO:01001357]
broad-scale environmental context
2013-07-16
collection date
99.95%
completeness score
CheckM2
completeness software
0%
contamination score
Cyanobacteriota metagenome-assembled genome BIN16 from alpine glacier surface collected at Italy: ERS1030528. Reconstructed through metagenomic binning.
description
freshwater [ENVO:00002011]
environmental medium
Italy
geographic location (country and/or sea)
46.39825 N
geographic location (latitude)
10.58561111 E
geographic location (longitude)
alpine glacier surface
isolation_source
glacier [ENVO:00000133]
local environmental context
ecological metagenome
metagenomic source
BIN16
metagenomic_bin
uncultured cyanobacterium
organism
SAMEA3723379
sample derived from
uncultured cyanobacterium
scientific_name
Illumina HiSeq 1500
sequencing method
Cryoconite microbial communities from the surface of Forni Glacier, Lombardia, Italy - ERS1030528
title