PRJEB106049
Accession
2026-01-07
ENA first public
ERC000011
ENA-CHECKLIST
d__Bacteria;p__Cyanobacteriota;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__
GTDBK_classification
3300045534
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28403044
SRA accession
SRX30468868
SRA_experimentID
ERP187154
Secondary Accession
IMGM3300045534_BIN55
Submitter Id
metaspades;3.14.1;default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
freshwater biome [ENVO:01001357]
broad-scale environmental context
2011-08-15
collection date
80.72%
completeness score
CheckM2
completeness software
3.04%
contamination score
Cyanobacteriota metagenome-assembled genome BIN55 from river surface water collected at USA: NASQAN2011_262. Reconstructed through metagenomic binning.
description
freshwater [ENVO:00002011]
environmental medium
USA
geographic location (country and/or sea)
41.178 N
geographic location (latitude)
91.182 W
geographic location (longitude)
river surface water
isolation_source
river [ENVO:00000022]
local environmental context
ecological metagenome
metagenomic source
BIN55
metagenomic_bin
uncultured cyanobacterium
organism
SAMN51147258
sample derived from
uncultured cyanobacterium
scientific_name
Illumina NovaSeq S4
sequencing method
Freshwater microbial communities from Iowa River, Iowa, USA - NASQAN2011_262
title