PRJEB106049
Accession
2026-01-07
ENA first public
ERC000011
ENA-CHECKLIST
d__Bacteria;p__Cyanobacteriota;c__Cyanobacteriia;o__Leptolyngbyales;f__Leptolyngbyaceae;g__Pantanalinema;s__
GTDBK_classification
3300037511
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28402950
SRA accession
SRX9172771
SRA_experimentID
ERP187154
Secondary Accession
IMGM3300037511_BIN31
Submitter Id
metaspades;3.13.0;default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
terrestrial biome [ENVO:00000446]
broad-scale environmental context
2018-12-20
collection date
60.98%
completeness score
CheckM2
completeness software
0.74%
contamination score
Cyanobacteriota metagenome-assembled genome BIN31 from soil from greenhouse collected at USA: YS_N_2 wSuillus Nitrogen. Reconstructed through metagenomic binning.
description
soil [ENVO:00001998]
environmental medium
USA
geographic location (country and/or sea)
36.0 N
geographic location (latitude)
78.0 W
geographic location (longitude)
soil from greenhouse
isolation_source
greenhouse [ENVO:00002034]
local environmental context
ecological metagenome
metagenomic source
BIN31
metagenomic_bin
uncultured cyanobacterium
organism
SAMN15741229
sample derived from
uncultured cyanobacterium
scientific_name
Illumina NovaSeq S4
sequencing method
Soil microbial communities from Duke University greenhouse, North Carolina, United States - YS_N_2 wSuillus Nitrogen
title