PRJEB106049
Accession
2026-01-07
ENA first public
ERC000011
ENA-CHECKLIST
d__Bacteria;p__Cyanobacteriota;c__Cyanobacteriia;o__Cyanobacteriales;f__CCAP-1448;g__Cyanosarcina;s__Cyanosarcina radialis
GTDBK_classification
3300037834
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28402742
SRA accession
SRX9168370
SRA_experimentID
ERP187154
Secondary Accession
IMGM3300037834_BIN3
Submitter Id
metaspades;3.13.0;default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
terrestrial biome [ENVO:00000446]
broad-scale environmental context
2011-01-06
collection date
100%
completeness score
CheckM2
completeness software
0.30%
contamination score
Cyanobacteriota metagenome-assembled genome BIN3 from damp rock above a pool in the cave collected at USA: 20190225_14. Reconstructed through metagenomic binning.
description
soil [ENVO:00001998]
environmental medium
USA
geographic location (country and/or sea)
21.8883 N
geographic location (latitude)
159.4188 W
geographic location (longitude)
damp rock above a pool in the cave
isolation_source
rock [ENVO:00001995]
local environmental context
ecological metagenome
metagenomic source
BIN3
metagenomic_bin
uncultured cyanobacterium
organism
SAMN15741799
sample derived from
uncultured cyanobacterium
scientific_name
Illumina NovaSeq S4
sequencing method
Cyanosarcina radialis HA8281-LM2 and co-occurring heterotrophs from damp rock surface from Makauwahi cave, Hawaii, United States - 20190225_14
title