PRJEB106049
Accession
2026-01-07
ENA first public
ERC000011
ENA-CHECKLIST
d__Bacteria;p__Cyanobacteriota;c__Cyanobacteriia;o__Cyanobacteriales;f__Microcystaceae;g__Microcystis;s__
GTDBK_classification
3300045051
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28402828
SRA accession
SRX19813603
SRA_experimentID
ERP187154
Secondary Accession
IMGM3300045051_BIN1260
Submitter Id
metaspades;3.14.1;default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
organismal entity [ENVO:01000128]
broad-scale environmental context
2020-01-28
collection date
50.81%
completeness score
CheckM2
completeness software
0.81%
contamination score
Cyanobacteriota metagenome-assembled genome BIN1260 from Rhizosphere soil from rice plant in pot experiment collected at USA: Rhiz_9BH_GED. Reconstructed through metagenomic binning.
description
soil [ENVO:00001998]
environmental medium
USA
geographic location (country and/or sea)
39.66844 N
geographic location (latitude)
75.7447 W
geographic location (longitude)
Rhizosphere soil from rice plant in pot experiment
isolation_source
rhizosphere [ENVO:00005801]
local environmental context
ecological metagenome
metagenomic source
BIN1260
metagenomic_bin
uncultured cyanobacterium
organism
SAMN33957397
sample derived from
uncultured cyanobacterium
scientific_name
Illumina NovaSeq S4
sequencing method
Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED
title