PRJEB106049
Accession
2026-01-07
ENA first public
ERC000011
ENA-CHECKLIST
d__Bacteria;p__Cyanobacteriota;c__Cyanobacteriia;o__Elainellales;f__Elainellaceae;g__;s__
GTDBK_classification
3300001357
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28402897
SRA accession
SRX2021703
SRA_experimentID
ERP187154
Secondary Accession
IMGM3300001357_BIN142
Submitter Id
missing;default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
freshwater biome [ENVO:01001357]
broad-scale environmental context
2011-08-11
collection date
85.82%
completeness score
CheckM2
completeness software
0.82%
contamination score
Cyanobacteriota metagenome-assembled genome BIN142 from Elkhorn Slough, Monterey Bay, California, USA collected at USA: Combined assembly of Elkhorn Slough mat metaG (MD2A, MD6A, CD2A, CD6A). Reconstructed through metagenomic binning.
description
freshwater [ENVO:00002011]
environmental medium
USA
geographic location (country and/or sea)
missing
geographic location (latitude)
missing
geographic location (longitude)
Elkhorn Slough, Monterey Bay, California, USA
isolation_source
lake [ENVO:00000020]
local environmental context
ecological metagenome
metagenomic source
BIN142
metagenomic_bin
uncultured cyanobacterium
organism
SAMN05518183
sample derived from
uncultured cyanobacterium
scientific_name
missingh
sequencing method
Combined assembly of Elkhorn Slough mat metaG (MD2A, MD6A, CD2A, CD6A)
title