PRJEB106049
Accession
2026-01-07
ENA first public
ERC000011
ENA-CHECKLIST
d__Bacteria;p__Cyanobacteriota;c__Cyanobacteriia;o__Leptolyngbyales;f__Leptolyngbyaceae;g__Stenomitos;s__Stenomitos sp014380065
GTDBK_classification
3300020180
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28402954
SRA accession
SRX3539186
SRA_experimentID
ERP187154
Secondary Accession
IMGM3300020180_BIN306
Submitter Id
SPAdes;3.10.1;default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
freshwater biome [ENVO:01001357]
broad-scale environmental context
2013-01-01
collection date
99.91%
completeness score
CheckM2
completeness software
0%
contamination score
Cyanobacteriota metagenome-assembled genome BIN306 from Oligotrophic lake microbial mat collected at Antarctica: Oligotrophic Lake LV.19.SP4.G1. Reconstructed through metagenomic binning.
description
freshwater [ENVO:00002011]
environmental medium
Antarctica
geographic location (country and/or sea)
77.5281 S
geographic location (latitude)
161.59 E
geographic location (longitude)
Oligotrophic lake microbial mat
isolation_source
lake [ENVO:00000020]
local environmental context
ecological metagenome
metagenomic source
BIN306
metagenomic_bin
uncultured cyanobacterium
organism
SAMN06269057
sample derived from
uncultured cyanobacterium
scientific_name
Illumina HiSeq 2500-1TB
sequencing method
Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.SP4.G1
title