PRJEB106049
Accession
2026-01-07
ENA first public
ERC000011
ENA-CHECKLIST
d__Bacteria;p__Cyanobacteriota;c__Vampirovibrionia;o__Gastranaerophilales;f__UBA9579;g__;s__
GTDBK_classification
3300042535
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28402680
SRA accession
SRX30280153
SRA_experimentID
ERP187154
Secondary Accession
IMGM3300042535_BIN60
Submitter Id
metaspades;3.14.1;default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
freshwater biome [ENVO:01001357]
broad-scale environmental context
2019-02-20
collection date
100%
completeness score
CheckM2
completeness software
4.74%
contamination score
Cyanobacteriota metagenome-assembled genome BIN60 from freshwater sediment collected at United Kingdom: PantS (IMG v5.0). Reconstructed through metagenomic binning.
description
freshwater sediment [ENVO:00002184]
environmental medium
United Kingdom
geographic location (country and/or sea)
52.0033 N
geographic location (latitude)
0.3211 E
geographic location (longitude)
freshwater sediment
isolation_source
river [ENVO:00000022]
local environmental context
ecological metagenome
metagenomic source
BIN60
metagenomic_bin
uncultured bacterium
organism
SAMN18243107
sample derived from
uncultured bacterium
scientific_name
Illumina NovaSeq S4
sequencing method
Sediment microbial communities from Pant River, United Kingdom - PantS (IMG v5.0)
title