PRJEB106049
Accession
2026-01-07
ENA first public
ERC000011
ENA-CHECKLIST
d__Bacteria;p__Cyanobacteriota;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__;s__
GTDBK_classification
3300045954
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28402833
SRA accession
SRX30468812
SRA_experimentID
ERP187154
Secondary Accession
IMGM3300045954_BIN192
Submitter Id
metaspades;3.14.1;default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
freshwater biome [ENVO:01001357]
broad-scale environmental context
2019-10-16
collection date
95.38%
completeness score
CheckM2
completeness software
0.42%
contamination score
Cyanobacteriota metagenome-assembled genome BIN192 from freshwater sediment collected at USA: BTRS19_Sengupta_13F. Reconstructed through metagenomic binning.
description
freshwater sediment [ENVO:00002184]
environmental medium
USA
geographic location (country and/or sea)
40.9138 N
geographic location (latitude)
124.0672 W
geographic location (longitude)
freshwater sediment
isolation_source
river [ENVO:00000022]
local environmental context
ecological metagenome
metagenomic source
BIN192
metagenomic_bin
uncultured cyanobacterium
organism
SAMN51146573
sample derived from
uncultured cyanobacterium
scientific_name
Illumina NovaSeq S4
sequencing method
Sediment microbial communities from Mad River, California, United States - BTRS19_Sengupta_13F
title