PRJEB106049
Accession
2026-01-07
ENA first public
ERC000011
ENA-CHECKLIST
d__Bacteria;p__Cyanobacteriota;c__Cyanobacteriia;o__Leptolyngbyales;f__Leptolyngbyaceae;g__Stenomitos;s__Stenomitos rutilans
GTDBK_classification
3300036446
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28402953
SRA accession
SRX8849857
SRA_experimentID
ERP187154
Secondary Accession
IMGM3300036446_BIN47
Submitter Id
metaspades;3.13.0;default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
terrestrial biome [ENVO:00000446]
broad-scale environmental context
2009-07-28
collection date
99.93%
completeness score
CheckM2
completeness software
0.08%
contamination score
Cyanobacteriota metagenome-assembled genome BIN47 from cave walls collected at USA: 20190126_53. Reconstructed through metagenomic binning.
description
soil [ENVO:00001998]
environmental medium
USA
geographic location (country and/or sea)
22.2202 N
geographic location (latitude)
159.5794 W
geographic location (longitude)
cave walls
isolation_source
cave [ENVO:00000067]
local environmental context
ecological metagenome
metagenomic source
BIN47
metagenomic_bin
uncultured cyanobacterium
organism
SAMN14502556
sample derived from
uncultured cyanobacterium
scientific_name
Illumina NovaSeq S4
sequencing method
Stenomitos rutilans HA7619-LM2 and co-occurring heterotrophs from cave wall surface from Waikapalae cave, Hawaii, United States - 20190126_53
title