PRJEB106049
Accession
2026-01-07
ENA first public
ERC000011
ENA-CHECKLIST
d__Bacteria;p__Cyanobacteriota;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__
GTDBK_classification
3300044527
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28403043
SRA accession
SRX23098996
SRA_experimentID
ERP187154
Secondary Accession
IMGM3300044527_BIN161
Submitter Id
metaspades;3.14.1;default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
freshwater biome [ENVO:01001357]
broad-scale environmental context
2015-08-13
collection date
99.32%
completeness score
CheckM2
completeness software
3.02%
contamination score
Cyanobacteriota metagenome-assembled genome BIN161 from lake water from pelagic integrated epilimnion zone collected at USA: TYMEFLIES-ME13Aug2015-rr0981. Reconstructed through metagenomic binning.
description
freshwater [ENVO:00002011]
environmental medium
USA
geographic location (country and/or sea)
43.0995 N
geographic location (latitude)
89.4045 W
geographic location (longitude)
lake water from pelagic integrated epilimnion zone
isolation_source
lake [ENVO:00000020]
local environmental context
ecological metagenome
metagenomic source
BIN161
metagenomic_bin
uncultured cyanobacterium
organism
SAMN18245381
sample derived from
uncultured cyanobacterium
scientific_name
Illumina NovaSeq S4
sequencing method
Freshwater microbial communities from Lake Mendota, Wisconsin, United States - TYMEFLIES-ME13Aug2015-rr0981
title