PRJEB106049
Accession
2026-01-07
ENA first public
ERC000011
ENA-CHECKLIST
d__Bacteria;p__Cyanobacteriota;c__Cyanobacteriia;o__PCC-6307;f__Cyanobiaceae;g__Vulcanococcus;s__
GTDBK_classification
3300020547
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28403027
SRA accession
SRX1988995
SRA_experimentID
ERP187154
Secondary Accession
IMGM3300020547_BIN36
Submitter Id
spades;3.11.1;default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
freshwater biome [ENVO:01001357]
broad-scale environmental context
2010-08-04
collection date
83.49%
completeness score
CheckM2
completeness software
0.97%
contamination score
Cyanobacteriota metagenome-assembled genome BIN36 from Lake Mendota, Madison, Wisconsin, USA collected at USA: 05AUG2010 deep hole epilimnion (SPAdes). Reconstructed through metagenomic binning.
description
freshwater [ENVO:00002011]
environmental medium
USA
geographic location (country and/or sea)
43.098333 N
geographic location (latitude)
89.405278 W
geographic location (longitude)
Lake Mendota, Madison, Wisconsin, USA
isolation_source
lake [ENVO:00000020]
local environmental context
ecological metagenome
metagenomic source
BIN36
metagenomic_bin
uncultured cyanobacterium
organism
SAMN05422100
sample derived from
uncultured cyanobacterium
scientific_name
Illumina HiSeq 2500
sequencing method
Freshwater microbial communities from Lake Mendota, WI - 05AUG2010 deep hole epilimnion (SPAdes)
title