PRJEB106049
Accession
2026-01-07
ENA first public
ERC000011
ENA-CHECKLIST
d__Bacteria;p__Cyanobacteriota;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Aulosira;s__
GTDBK_classification
3300042995
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28402835
SRA accession
SRX20998740
SRA_experimentID
ERP187154
Secondary Accession
IMGM3300042995_BIN39
Submitter Id
metaspades;3.14.1;default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
terrestrial biome [ENVO:00000446]
broad-scale environmental context
2006-06-28
collection date
99.98%
completeness score
CheckM2
completeness software
0.30%
contamination score
Cyanobacteriota metagenome-assembled genome BIN39 from Granitic soil from Mojave Desert collected at USA: 20200702_47. Reconstructed through metagenomic binning.
description
soil [ENVO:00001998]
environmental medium
USA
geographic location (country and/or sea)
34.0413 N
geographic location (latitude)
116.145 W
geographic location (longitude)
Granitic soil from Mojave Desert
isolation_source
desert [ENVO:01000179]
local environmental context
ecological metagenome
metagenomic source
BIN39
metagenomic_bin
uncultured cyanobacterium
organism
SAMN18248239
sample derived from
uncultured cyanobacterium
scientific_name
Illumina NovaSeq S4
sequencing method
Roholtiella mojaviensis WJT36-NPBG5B and co-occurring heterotrophs from granitic soil from Wonderland of Rocks, Joshua Tree National Park, Mojave Desert, CA, USA - 20200702_47
title