PRJEB106049
Accession
2026-01-07
ENA first public
ERC000011
ENA-CHECKLIST
d__Bacteria;p__Cyanobacteriota;c__Vampirovibrionia;o__Obscuribacterales;f__Obscuribacteraceae;g__;s__
GTDBK_classification
3300005332
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28402691
SRA accession
SRX4807071, SRX4807072, SRX4807073, SRX4807075, SRX4807074
SRA_experimentID
ERP187154
Secondary Accession
IMGM3300005332_BIN70
Submitter Id
MEGAHIT;0.2.0;default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
terrestrial biome [ENVO:00000446]
broad-scale environmental context
2014-10-27
collection date
83.09%
completeness score
CheckM2
completeness software
3.43%
contamination score
Cyanobacteriota metagenome-assembled genome BIN70 from Tropical forest soil collected at Panama: Panama Soil - Plot 6 (Hybrid Assembly). Reconstructed through metagenomic binning.
description
soil [ENVO:00001998]
environmental medium
Panama
geographic location (country and/or sea)
9.1086 N
geographic location (latitude)
79.8436 W
geographic location (longitude)
Tropical forest soil
isolation_source
forest [ENVO:00000111]
local environmental context
ecological metagenome
metagenomic source
BIN70
metagenomic_bin
uncultured bacterium
organism
SAMN08779656
sample derived from
uncultured bacterium
scientific_name
Illumina HiSeq 2500-Rapid, PacBio RS II
sequencing method
Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)
title