PRJEB106049
Accession
2026-01-07
ENA first public
ERC000011
ENA-CHECKLIST
d__Bacteria;p__Cyanobacteriota;c__Vampirovibrionia;o__Obscuribacterales;f__Obscuribacteraceae;g__JAIEPM01;s__
GTDBK_classification
3300014838
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28402716
SRA accession
SRX3903280, SRX3903278, SRX3903283, SRX3903282, SRX3903284, SRX3903281, SRX3903279, SRX3903277
SRA_experimentID
ERP187154
Secondary Accession
IMGM3300014838_BIN358
Submitter Id
MEGAHIT;1.0.6;default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
terrestrial biome [ENVO:00000446]
broad-scale environmental context
2012-08-23
collection date
55.73%
completeness score
CheckM2
completeness software
0.86%
contamination score
Cyanobacteriota metagenome-assembled genome BIN358 from Mire bog collected at Sweden: 812S3M metaG (Illumina Assembly). Reconstructed through metagenomic binning.
description
soil [ENVO:00001998]
environmental medium
Sweden
geographic location (country and/or sea)
68.35 N
geographic location (latitude)
19.05 E
geographic location (longitude)
Mire bog
isolation_source
wetland [ENVO:00000043]
local environmental context
ecological metagenome
metagenomic source
BIN358
metagenomic_bin
uncultured bacterium
organism
SAMN08778866
sample derived from
uncultured bacterium
scientific_name
PacBio RS II, Illumina HiSeq 2500-1TB
sequencing method
Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)
title