PRJEB106049
Accession
2026-01-07
ENA first public
ERC000011
ENA-CHECKLIST
d__Bacteria;p__Cyanobacteriota;c__Vampirovibrionia;o__Obscuribacterales;f__Obscuribacteraceae;g__JADYXS01;s__JADYXS01 sp021772155
GTDBK_classification
3300020057
IMG_genome_ID
JGI
INSDC center name
public
INSDC status
ERS28402715
SRA accession
SRX3539179
SRA_experimentID
ERP187154
Secondary Accession
IMGM3300020057_BIN332
Submitter Id
SPAdes;3.10.1;default parameters
assembly software
--minContig 5000, --minClsSize 20000, --cvExt; tetranucleotide frequency for composition; coverage from BAM files
binning parameters
MetaBAT 2
binning software
freshwater biome [ENVO:01001357]
broad-scale environmental context
2013-01-01
collection date
76.49%
completeness score
CheckM2
completeness software
0.71%
contamination score
Cyanobacteriota metagenome-assembled genome BIN332 from Oligotrophic lake microbial mat collected at Antarctica: Oligotrophic Lake LV.19.MP5.IB-2. Reconstructed through metagenomic binning.
description
freshwater [ENVO:00002011]
environmental medium
Antarctica
geographic location (country and/or sea)
77.5281 S
geographic location (latitude)
161.59 E
geographic location (longitude)
Oligotrophic lake microbial mat
isolation_source
lake [ENVO:00000020]
local environmental context
ecological metagenome
metagenomic source
BIN332
metagenomic_bin
uncultured bacterium
organism
SAMN06269053
sample derived from
uncultured bacterium
scientific_name
Illumina HiSeq 2500-1TB
sequencing method
Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP5.IB-2
title