2026-01-07
ENA first public
ERC000011
ENA-CHECKLIST
Graduate School of Agricultural and Life Sciences, The University of Tokyo
INSDC center name
public
INSDC status
ERS28366440
SRA accession
E-MTAB-16436:15DAP_EC12P10_2
Submitter Id
15
day
age
ArrayExpress
broker name
not collected
collection date
tomato
common name
Frutica
cultivar
Protocols: Pericarp tissues were separated from fruits using a scalpel, and the samples were frozen in liquid nitrogen. Tomato seedlings were grown hydroponically with different concentrations of nutrients and salts. EC12, P10 and EC12 refers to a high salt condition (EC12, 94 mM NaCl), a low phosphate solution (10% of control) and the combination of both. Samples were ground in liquid nitrogen into powder. Total RNA was isolated from the powdered samples using RNA iso plus (TaKaRa). One sample is from one fruit. Library was constructed as described in Lasy-seq protocol (https://sites.google.com/view/lasy-seq/)
description
Immature green
developmental stage
wild type genotype
genotype
not collected
geographic location (country and/or sea)
not applicable
isolate
Solanum lycopersicum
organism
Solanum lycopersicum
organism
pericarp
organism part
Solanum lycopersicum
scientific_name
EC12P10
stimulus
15DAP_EC12P10_2
title