characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UZH

characteristic: INSDC center alias

text: University of Zurich

characteristic: INSDC center name

text: public

text: colonization

text: Switzerland

text: diseased

text: Homo sapiens

text: Urin

text: Enterococcus faecium

text: Clinical isolate


status: PUBLIC

tag: attribute

text: UZH

text: University of Zurich

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: colonization

characteristic: description

text: Switzerland

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: Tracheal swab

characteristic: isolation source

characteristic: lat lon

text: Enterococcus faecium

characteristic: organism

text: Clinical isolate

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UZH

characteristic: INSDC center alias

text: University of Zurich

text: public

text: infection

text: Switzerland

text: diseased

text: Homo sapiens

text: Superficial wound

text: Enterococcus faecium

text: Clinical isolate


text: UZH

text: University of Zurich

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: colonization

text: Switzerland

text: diseased

text: Homo sapiens

text: Catheter

text: Enterococcus faecium

text: Clinical isolate


text: UZH

text: University of Zurich

text: public

characteristic: Submitter Id

characteristic: collection date

text: colonization

characteristic: description

text: Switzerland

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Homo sapiens

text: Perianal swab

text: Enterococcus faecium

text: Clinical isolate


text: UZH

text: University of Zurich

text: public

text: colonization

text: Switzerland

text: diseased

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: Inguinal swab

characteristic: isolation source

characteristic: lat lon

text: Enterococcus faecium

characteristic: organism

text: Clinical isolate


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UZH

text: University of Zurich

text: public

text: colonization

text: Switzerland

text: diseased

text: Homo sapiens

text: Superficial wound

text: Enterococcus faecium

text: Clinical isolate

characteristic: title


text: UZH

characteristic: INSDC center alias

text: University of Zurich

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: infection

text: Switzerland

text: diseased

text: Homo sapiens

text: Urin

text: Enterococcus faecium

text: Clinical isolate


text: UZH

text: University of Zurich

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: infection

characteristic: description

text: Switzerland

characteristic: geographic location (country and/or sea)

text: diseased

text: Homo sapiens

text: Percutaneous biliary drainage

text: Enterococcus faecium

text: Clinical isolate


text: UZH

text: University of Zurich

text: public

text: colonization

text: Switzerland

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: Rectal swab

characteristic: isolation source

characteristic: lat lon

text: Enterococcus faecium

text: Clinical isolate


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UZH

text: University of Zurich

text: public

text: infection

text: Switzerland

text: diseased

text: Homo sapiens

text: Inguinal/Rectal swab

text: Enterococcus faecium

characteristic: organism

text: Clinical isolate


text: UZH

characteristic: INSDC center alias

text: University of Zurich

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: colonization

text: Switzerland

text: diseased

text: Homo sapiens

text: Inguinal/Rectal swab

text: Enterococcus faecium

text: Clinical isolate

characteristic: title


text: UZH

text: University of Zurich

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: infection

characteristic: description

text: Switzerland

text: diseased

text: Homo sapiens

text: Abdomen

text: Enterococcus faecium

text: Clinical isolate


text: UZH

text: University of Zurich

text: public

text: infection

text: Switzerland

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: Rectal swab

characteristic: isolation source

text: Enterococcus faecium

text: Clinical isolate


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UZH

text: University of Zurich

text: public

text: colonization

text: Switzerland

text: diseased

text: Homo sapiens

text: Abdomen

characteristic: lat lon

text: Enterococcus faecium

text: Clinical isolate


text: UZH

characteristic: INSDC center alias

text: University of Zurich

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: infection

text: Switzerland

text: diseased

text: Homo sapiens

text: Deep wound

text: Enterococcus faecium

characteristic: organism

text: Clinical isolate


text: UZH

text: University of Zurich

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: infection

text: Switzerland

text: diseased

text: Homo sapiens

text: Catheter

text: Enterococcus faecium

text: Clinical isolate

characteristic: title


text: UZH

text: University of Zurich

text: public

text: infection

characteristic: description

text: Switzerland

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

characteristic: isolate

text: Enterococcus faecium

text: Clinical isolate


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UZH

text: University of Zurich

text: public

text: infection

text: Switzerland

text: diseased

text: Homo sapiens

text: Blood culture

characteristic: isolation source

text: Enterococcus faecium

text: Clinical isolate


text: UZH

characteristic: INSDC center alias

text: University of Zurich

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: colonization

text: Switzerland

text: diseased

text: Homo sapiens

text: Urin

characteristic: lat lon

text: Enterococcus faecium

text: Clinical isolate


text: UZH

text: University of Zurich

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: infection

text: Switzerland

text: diseased

text: Homo sapiens

text: Inguinal swab

text: Enterococcus faecium

characteristic: organism

text: Clinical isolate


text: UZH

text: University of Zurich

text: public

text: infection

characteristic: description

text: Switzerland

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Perianal swab

text: Enterococcus faecium

text: Clinical isolate

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UZH

text: University of Zurich

text: public

text: colonization

text: Switzerland

text: diseased

text: Homo sapiens

characteristic: isolate

text: Inguinal swab

text: Enterococcus faecium

text: Clinical isolate


text: UZH

characteristic: INSDC center alias

text: University of Zurich

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: colonization

text: Switzerland

text: diseased

text: Homo sapiens

text: Pooled swab

characteristic: isolation source

text: Enterococcus faecium

text: Clinical isolate


text: UZH

text: University of Zurich

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collection date

text: infection

text: Switzerland

text: diseased

text: Homo sapiens

text: Superficial wound

characteristic: lat lon

text: Enterococcus faecium

text: Clinical isolate


text: UZH

text: University of Zurich

text: public

text: infection

characteristic: description

text: Switzerland

characteristic: geographic location (country and/or sea)

text: diseased

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Urin

text: Enterococcus faecium

characteristic: organism

text: Clinical isolate


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: UZH

text: University of Zurich

text: public

text: Recipient strain (Poyart, C. & Trieu-Cuot, P. Heterogeneric conjugal transfer of the pheromone-responsive plasmid pIP964 (IncHlyI) of Enterococcus faecalis in the apparent absence of pheromone induction. FEMS Microbiol. Lett. 1994)

text: Switzerland

text: Enterococcus faecium

text: Laboratory strain

characteristic: title


text: UZH

characteristic: INSDC center alias

text: University of Zurich

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Transconjugant strain

text: Switzerland

characteristic: isolate

text: Enterococcus faecium

text: Laboratory strain


characteristic: GISAID Accession ID

text: Dutch COVID-19 response team

text: Dutch COVID-19 response team

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Dutch COVID-19 response team

characteristic: Submitter Id

text: Submission account for department of Viroscience’s Research Teams, ErasmusMC

characteristic: broker name

text: not provided

characteristic: collecting institution

characteristic: collection date

text: Dutch COVID-19 response team

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: A SARS-CoV-2 specific multiplex PCR for Nanopore sequencing was performed, similar to amplicon-based approaches as previously described. In short, primers for 86 overlapping amplicons spanning the entire genome were designed using primal. The amplicon length was set to 500bp with 75bp overlap between the different amplicons. The libraries were generated using the native barcode kits from Nanopore (EXP-NBD104 and EXP-NBD114 and SQK-LSK109) and sequenced on a R9.4 flow cell multiplexing up to 24 samples per sequence run. Raw data was demultiplexed, amplicon primers were trimmed and human data was removed by mapping against the human reference genome.

text: Netherlands

text: Noord-Brabant

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not collected

text: Homo sapiens

text: not provided

characteristic: host sex

text: restricted access

characteristic: host subject id

text: not collected

characteristic: isolation source host associated

text: Severe acute respiratory syndrome coronavirus 2

text: active surveillance in response to outbreak

characteristic: sample capture status

text: Dutch COVID-19 response sample sequencing


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Dutch COVID-19 response team

characteristic: INSDC center alias

text: Dutch COVID-19 response team

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: not provided

text: Dutch COVID-19 response team

text: Human coronavirus 2019

characteristic: description

text: Netherlands

characteristic: geographic location (country and/or sea)

text: Zuid-Holland

text: Human

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: restricted access

text: not collected

characteristic: organism

characteristic: title


characteristic: GISAID Accession ID

text: Dutch COVID-19 response team

text: Dutch COVID-19 response team

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: broker name

text: not provided

characteristic: collecting institution

characteristic: collection date

text: Dutch COVID-19 response team

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Netherlands

text: Limburg

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not collected

text: Homo sapiens

text: not provided

characteristic: host sex

text: restricted access

characteristic: host subject id

characteristic: isolate

text: not collected


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Dutch COVID-19 response team

characteristic: INSDC center alias

text: Dutch COVID-19 response team

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: not provided

text: Dutch COVID-19 response team

text: Human coronavirus 2019

characteristic: description

text: Netherlands

characteristic: geographic location (country and/or sea)

text: Utrecht

text: Human

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: restricted access

text: not collected

characteristic: isolation source host associated

characteristic: sample capture status


characteristic: GISAID Accession ID

text: Dutch COVID-19 response team

text: Dutch COVID-19 response team

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: broker name

text: not provided

characteristic: collecting institution

characteristic: collection date

text: Dutch COVID-19 response team

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Netherlands

text: Overijssel

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not collected

text: Homo sapiens

text: not provided

characteristic: host sex

text: restricted access

text: not collected

characteristic: organism

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Dutch COVID-19 response team

characteristic: INSDC center alias

text: Dutch COVID-19 response team

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: not provided

text: Dutch COVID-19 response team

text: Human coronavirus 2019

characteristic: description

text: Netherlands

characteristic: geographic location (country and/or sea)

text: Noord-Holland

text: Human

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: restricted access

characteristic: host subject id

characteristic: isolate

text: not collected


characteristic: GISAID Accession ID

text: Dutch COVID-19 response team

text: Dutch COVID-19 response team

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: broker name

text: not provided

characteristic: collecting institution

characteristic: collection date

text: Dutch COVID-19 response team

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Netherlands

text: Gelderland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not collected

text: Homo sapiens

text: not provided

characteristic: host sex

text: restricted access

text: not collected

characteristic: isolation source host associated

characteristic: sample capture status


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Dutch COVID-19 response team

characteristic: INSDC center alias

text: Dutch COVID-19 response team

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: not provided

text: Dutch COVID-19 response team

text: Human coronavirus 2019

characteristic: description

text: Netherlands

characteristic: geographic location (country and/or sea)

text: Friesland

text: Human

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: restricted access

text: not collected

characteristic: organism

characteristic: title


characteristic: GISAID Accession ID

text: Dutch COVID-19 response team

text: Dutch COVID-19 response team

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: broker name

text: not provided

characteristic: collecting institution

characteristic: collection date

text: Dutch COVID-19 response team

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Netherlands

text: not collected

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not collected

text: Homo sapiens

text: not provided

characteristic: host sex

text: restricted access

characteristic: host subject id

characteristic: isolate

text: not collected


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Dutch COVID-19 response team

characteristic: INSDC center alias

text: Dutch COVID-19 response team

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: not provided

text: Dutch COVID-19 response team

text: Human coronavirus 2019

characteristic: description

text: Netherlands

characteristic: geographic location (country and/or sea)

text: Drenthe

text: Human

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: restricted access

text: not collected

characteristic: isolation source host associated

characteristic: sample capture status


characteristic: GISAID Accession ID

text: Dutch COVID-19 response team

text: Dutch COVID-19 response team

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: broker name

text: not provided

characteristic: collecting institution

characteristic: collection date

text: Dutch COVID-19 response team

characteristic: collector name

text: Human coronavirus 2019

characteristic: common name

text: Netherlands

text: Zeeland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: not collected

text: Homo sapiens

text: not provided

characteristic: host sex

text: restricted access

text: not collected

characteristic: organism

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Dutch COVID-19 response team

characteristic: INSDC center alias

text: Dutch COVID-19 response team

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: not provided

text: Dutch COVID-19 response team

text: Human coronavirus 2019

characteristic: description

text: Netherlands

characteristic: geographic location (country and/or sea)

text: Flevoland

text: Human

text: not collected

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: restricted access

characteristic: host subject id

characteristic: isolate

text: not collected


text: University Hospital Galway

text: University Hospital Galway

text: public

characteristic: INSDC status

characteristic: SRA accession

text: sam_NSSLRL_db241420-cb32-45de-a038-e1a310f19556

tag: Namespace:University Hospital Galway

characteristic: Submitter Id

characteristic: checklist

characteristic: collection date

text: Salmonella enterica

text: Salmonella enterica subsp. enterica serovar Enteritidis


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

text: University Hospital Galway

text: University Hospital Galway

text: public

text: sam_NSSLRL_94740ed4-6d10-4894-9776-4b09e07913e7

text: Salmonella enterica

characteristic: organism

characteristic: title


characteristic: External Id

text: University Hospital Galway

characteristic: INSDC center alias

text: University Hospital Galway

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: sam_NSSLRL_fd6d16ca-ba55-467b-8034-a18bd5d41a40

text: Salmonella enterica

text: Salmonella enterica subsp. enterica serovar Typhimurium var. monophasic 4,[5],12:i:-


text: University Hospital Galway

text: University Hospital Galway

text: public

text: sam_NSSLRL_c6d3c5ce-7298-4a30-bab7-42176bbc953e

text: Salmonella enterica


text: University Hospital Galway

text: University Hospital Galway

text: public

text: sam_NSSLRL_7a4ad49b-b3df-4f4c-a8cc-707e92c08722

text: Salmonella enterica

text: Salmonella enterica subsp. enterica serovar Agona


text: public

tag: Namespace:Department of Medical Microbiology, Stavanger University Hospital

text: Sweden

characteristic: geographic location (country and/or sea)

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Urine

characteristic: isolation source

text: Escherichia coli


text: Department of Medical Microbiology, Stavanger University Hospital

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Sweden

text: restricted access

text: Homo sapiens

characteristic: isolate

text: Escherichia coli


characteristic: ENA first public

characteristic: ENA last update

text: public

characteristic: collection date

text: Denmark

text: restricted access

text: Homo sapiens

text: Escherichia coli


characteristic: ENA-CHECKLIST

text: public

text: Germany

text: restricted access

text: Homo sapiens

text: Wound

text: Escherichia coli

characteristic: organism

characteristic: title


characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

text: Sweden

text: restricted access

text: Homo sapiens

text: Urine

text: Escherichia coli


characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Sweden

characteristic: geographic location (country and/or sea)

text: restricted access

text: Homo sapiens

text: Blood

text: Escherichia coli


text: public

text: Sweden

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: Klebsiella pneumoniae


text: public

characteristic: INSDC status

characteristic: SRA accession

text: Germany

text: restricted access

text: Homo sapiens

text: Urine

characteristic: isolation source

text: Klebsiella pneumoniae


characteristic: ENA first public

text: public

characteristic: Submitter Id

text: Germany

text: restricted access

text: Homo sapiens

characteristic: isolate

text: Blood

text: Klebsiella pneumoniae


characteristic: ENA last update

characteristic: ENA-CHECKLIST

text: public

characteristic: collection date

text: Germany

text: restricted access

text: Homo sapiens

text: Broncheal secretion

text: Klebsiella pneumoniae


characteristic: External Id

text: public

text: Germany

text: restricted access

text: Homo sapiens

text: Wound

text: Klebsiella pneumoniae

characteristic: organism

characteristic: title


characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Germany

text: restricted access

text: Homo sapiens

text: Rectal swab

text: Klebsiella pneumoniae


characteristic: INSDC last update

text: public

text: Sweden

characteristic: geographic location (country and/or sea)

text: restricted access

characteristic: host health state

text: Homo sapiens

text: Blood

text: Klebsiella pneumoniae


text: SSI

text: Statens Serum Institut

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Denmark

text: not collected

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: Salmonella enterica

text: Danish outbreak strain


characteristic: ENA first public

text: public

tag: Namespace:BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO

characteristic: Submitter Id

text: lake water metagenome

characteristic: common name

text: Freshwater metagenome from Thun Lake, Switzerland; 180m depth, 5oct2018, filtersize 0.22 um

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: fresh water

characteristic: environment (feature)

text: Switzerland

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome

characteristic: investigation type

text: lake water metagenome

text: ena-STUDY-BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO-11-12-2019-16:15:02:404-1223

characteristic: project name

text: Illumina Hiseq

characteristic: sequencing method


characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: BIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: collection date

text: lake water metagenome

text: Freshwater metagenome from Jiricka Lake, Czechia; 1m depth, 19feb2018, filtersize 0.22 um

text: freshwater lake

text: fresh water

text: Czech Republic

text: metagenome

text: lake water metagenome

characteristic: organism

text: Illumina Novaseq

characteristic: title


characteristic: ENA first public

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: lake water metagenome

characteristic: common name

text: Freshwater metagenome from Zurich Lake, Switzerland; 5m depth, 11jul2018, filtersize 0.22 um

characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: fresh water

text: Switzerland

characteristic: geographic location (country and/or sea)

text: metagenome

text: lake water metagenome

text: Illumina Hiseq

text: Freshwater metagenome from Zurich Lake, Switzerland; 5m depth,11 jul2018


characteristic: ENA last update

characteristic: ENA-CHECKLIST

text: public

text: lake water metagenome

text: Freshwater metagenome from Zurich Lake, Switzerland; 5m depth, 15may2019, filtersize 0.22 um

text: freshwater lake

text: fresh water

characteristic: environment (feature)

text: Switzerland

characteristic: geographic location (latitude)

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text: Freshwater metagenome from Zurich Lake, Switzerland; 0.5m depth, 15may2019, filtersize 0.22 um

text: freshwater lake

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characteristic: description

text: freshwater lake

characteristic: environment (biome)

text: fresh water

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characteristic: geographic location (country and/or sea)

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text: M. Carmen Pérez González, Francisco J. Chamizo López, Ana Bordes Benítez and SeqCOVID-Spain consortium

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characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

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characteristic: title


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characteristic: organism

text: SARS-CoV-2 genome COV024953

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text: Human coronavirus 2019

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

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text: Europe / Ireland / Dublin

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text: Europe / Ireland / Longford

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text: Europe / Ireland / Wicklow

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text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

text: NVRL

text: NVRL

text: public

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Clare

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: sample capture status


characteristic: ENA first public

characteristic: ENA last update

characteristic: External Id

text: NVRL

characteristic: INSDC center alias

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

text: Europe / Ireland / Mayo

text: human

text: not provided

text: Homo sapiens

text: male

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

text: NVRL

text: NVRL

text: public

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Mayo

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: sample capture status


characteristic: ENA first public

characteristic: ENA last update

characteristic: External Id

text: NVRL

characteristic: INSDC center alias

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

text: Europe / Ireland / Limerick

text: human

text: not provided

text: Homo sapiens

text: female

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

text: NVRL

text: NVRL

text: public

characteristic: broker name

text: National Virus Reference Laboratory

characteristic: collecting institution

text: not provided

characteristic: collector name

text: Human coronavirus 2019

text: Ireland

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Europe / Ireland / Laois

characteristic: geographic location (region and locality)

characteristic: host age

text: human

characteristic: host common name

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: female

characteristic: host sex

text: not provided

characteristic: host subject id

text: Oro-Nasopharyngeal swab

characteristic: isolation source host associated

characteristic: sample capture status


characteristic: ENA first public

characteristic: ENA last update

characteristic: External Id

text: NVRL

characteristic: INSDC center alias

text: NVRL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: National Virus Reference Laboratory

characteristic: collection date

text: not provided

text: Human coronavirus 2019

characteristic: common name

characteristic: description

text: Ireland

text: Europe / Ireland / Dublin

text: human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: Oro-Nasopharyngeal swab

characteristic: organism

characteristic: title

characteristic: virus identifier


characteristic: ENA-CHECKLIST

text: public

tag: Namespace:Respiratory Virus Unit, Microbiology Services Colindale, Public Health England

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: receipt date

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided


characteristic: ENA first public

characteristic: ENA last update

characteristic: External Id

text: Liverpool Clinical Laboratories

characteristic: INSDC center alias

text: Liverpool Clinical Laboratories

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

text: Liverpool Clinical Laboratories

characteristic: collection date

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

text: Human

text: not provided

text: not provided

text: not provided

characteristic: organism

text: not provided

characteristic: title

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

text: Respiratory Virus Unit, Microbiology Services Colindale, Public Health England

text: public

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: receipt date

text: not provided

text: not provided


characteristic: ENA first public

characteristic: ENA last update

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:University College London, Great Ormond Street Hospital for Children NHS Foundation Trust, Imperial College Healthcare NHS Trust

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: collection date

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

text: Human

text: not provided

text: not provided

text: not provided

characteristic: organism

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided


characteristic: ENA-CHECKLIST

text: Quadram Institute Bioscience

text: Quadram Institute Bioscience

text: public

tag: Namespace:Quadram Institute Bioscience

text: COVID-19 Genomics UK Consortium

characteristic: broker name

text: Quadram Institute Bioscience

characteristic: collecting institution

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

text: not provided

characteristic: title

text: not provided

characteristic: virus identifier


characteristic: ENA first public

characteristic: ENA last update

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Virology Department, Royal Infirmary of Edinburgh, NHS Lothian / School of Biological Sciences, University of Edinburgh

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

characteristic: collection date

text: not provided

text: not provided

text: United Kingdom

text: Scotland

text: not provided

text: not provided

text: Human

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

text: not provided

text: not provided


COG-UK/BIRM-BCDIIC

characteristic: ENA-CHECKLIST

text: University of Birmingham

text: University of Birmingham

text: public

text: COG-UK/BIRM-BCDIIC

tag: Namespace:University of Birmingham

text: COVID-19 Genomics UK Consortium

characteristic: broker name

text: University of Birmingham

characteristic: collecting institution

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/BIRM-BCDIIC

text: not provided


characteristic: ENA first public

characteristic: ENA last update

characteristic: External Id

text: University of Birmingham

characteristic: INSDC center alias

text: University of Birmingham

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

text: University of Birmingham

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

text: Human

text: not provided

text: not provided

characteristic: host subject id

text: not provided

characteristic: receipt date

text: not provided

characteristic: title

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

text: University of Exeter

text: University of Exeter

text: public

tag: Namespace:University of Exeter

text: COVID-19 Genomics UK Consortium

characteristic: broker name

text: University of Exeter

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

text: not provided

text: not provided


COG-UK/PHWC-PYRRUU

characteristic: ENA first public

characteristic: ENA last update

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/PHWC-PYRRUU

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

text: Human

text: not provided

text: not provided

characteristic: host subject id

text: not provided

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/PHWC-PYRRUU

text: not provided


characteristic: ENA-CHECKLIST

text: public

tag: Namespace:Centre for Enzyme Innovation, University of Portsmouth / Translational Research Laboratory, Portsmouth Hospitals NHS Trust

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: receipt date

text: not provided

characteristic: title

text: not provided

characteristic: virus identifier


characteristic: ENA first public

characteristic: ENA last update

characteristic: External Id

text: University College London, Great Ormond Street Hospital for Children NHS Foundation Trust, Imperial College Healthcare NHS Trust

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

text: not provided

text: not provided


COG-UK/PHESW-YYBYSNF

characteristic: ENA-CHECKLIST

text: public

text: COG-UK/PHESW-YYBYSNF

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: COG-UK/PHESW-YYBYSNF

text: not provided


characteristic: ENA first public

characteristic: ENA last update

characteristic: External Id

text: University of Exeter

characteristic: INSDC center alias

text: University of Exeter

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

text: University of Exeter

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

text: Human

text: not provided

characteristic: host sex

text: not provided

text: not provided

characteristic: receipt date

text: not provided

characteristic: title

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

text: public

tag: Namespace:Originating lab: Wales Specialist Virology Centre Sequencing lab: Pathogen Genomics Unit

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Wales

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

text: not provided

text: not provided


characteristic: ENA first public

characteristic: ENA last update

characteristic: External Id

text: Quadram Institute Bioscience

characteristic: INSDC center alias

text: Quadram Institute Bioscience

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

text: Quadram Institute Bioscience

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

text: Human

text: not provided

characteristic: host sex

text: not provided

text: not provided

characteristic: receipt date

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided


characteristic: ENA-CHECKLIST

text: University of Birmingham

text: University of Birmingham

text: public

text: COVID-19 Genomics UK Consortium

characteristic: broker name

text: University of Birmingham

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

text: not provided

characteristic: host subject id

text: not provided

text: not provided

characteristic: title

text: not provided

characteristic: virus identifier


COG-UK/PHWC-PYRJZG

characteristic: ENA first public

characteristic: ENA last update

characteristic: External Id

text: Originating lab: Wales Specialist Virology Centre Sequencing lab: Pathogen Genomics Unit

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: COG-UK/PHWC-PYRJZG

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: Wales

text: not provided

text: not provided

text: Human

text: not provided

characteristic: host sex

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

text: not provided

text: COG-UK/PHWC-PYRJZG

text: not provided


characteristic: ENA-CHECKLIST

text: Centre for Enzyme Innovation, University of Portsmouth / Translational Research Laboratory, Portsmouth Hospitals NHS Trust

text: public

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: receipt date

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided


characteristic: ENA first public

characteristic: ENA last update

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

text: not provided

characteristic: title

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

text: public

tag: Namespace:St George's University Hospitals NHS Foundation Trust

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

text: not provided

text: not provided


characteristic: ENA first public

characteristic: ENA last update

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: Wales

text: not provided

text: not provided

text: Human

text: not provided

characteristic: host sex

text: not provided

text: not provided

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided


characteristic: ENA-CHECKLIST

text: public

tag: Namespace:West of Scotland Specialist Virology Centre, NHSGGC / MRC-University of Glasgow Centre for Virus Research

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: Scotland

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

characteristic: host subject id

text: not provided

text: not provided

characteristic: title

text: not provided

characteristic: virus identifier


characteristic: ENA first public

characteristic: ENA last update

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Queens Medical Centre, Clinical Microbiology Department / DeepSeq Nottingham

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

text: public

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

text: not provided

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided


characteristic: ENA first public

characteristic: ENA last update

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Department of Pathology, University of Cambridge

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

text: Human

text: not provided

text: not provided

characteristic: host subject id

text: not provided

characteristic: receipt date

text: not provided

characteristic: title

text: not provided

characteristic: virus identifier


tag: attribute

characteristic: ENA-CHECKLIST

text: Quadram Institute Bioscience

text: Quadram Institute Bioscience

text: public

text: COVID-19 Genomics UK Consortium

characteristic: broker name

text: Quadram Institute Bioscience

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

text: not provided

text: not provided


characteristic: ENA first public

characteristic: ENA last update

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

text: Human

text: not provided

text: not provided

characteristic: host subject id

text: not provided

characteristic: receipt date

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided


characteristic: ENA-CHECKLIST

text: public

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: not provided

characteristic: title

text: not provided

characteristic: virus identifier


characteristic: ENA first public

characteristic: ENA last update

characteristic: External Id

text: West of Scotland Specialist Virology Centre, NHSGGC / MRC-University of Glasgow Centre for Virus Research

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: Scotland

text: not provided

text: not provided

text: Human

text: not provided

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

text: public

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided


characteristic: ENA first public

characteristic: ENA last update

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Virology Department, Sheffield Teaching Hospitals NHS Foundation Trust/Department of Infection, Immunity and Cardiovascular Disease, The Medical School, University of Sheffield

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

text: Human

text: not provided

characteristic: host sex

text: not provided

text: not provided

text: not provided

characteristic: title

text: not provided

characteristic: virus identifier


COG-UK/PHESW-YYBYSAA

characteristic: ENA-CHECKLIST

text: public

text: COG-UK/PHESW-YYBYSAA

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

text: not provided

text: COG-UK/PHESW-YYBYSAA

text: not provided


characteristic: ENA first public

characteristic: ENA last update

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Oxford Viromics, NDM, University of Oxford; Oxford University Hospitals; Basingstoke and North Hampshire Hospital

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: Wales

text: not provided

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: receipt date

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided


characteristic: ENA-CHECKLIST

text: University of Exeter

text: University of Exeter

text: public

text: COVID-19 Genomics UK Consortium

characteristic: broker name

text: University of Exeter

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

text: not provided

characteristic: title

text: not provided

characteristic: virus identifier


characteristic: ENA first public

characteristic: ENA last update

characteristic: External Id

text: Department of Pathology, University of Cambridge

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: organism

characteristic: receipt date

text: not provided

text: not provided


characteristic: ENA-CHECKLIST

text: Quadram Institute Bioscience

text: Quadram Institute Bioscience

text: public

text: COVID-19 Genomics UK Consortium

characteristic: broker name

text: Quadram Institute Bioscience

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided


characteristic: ENA first public

characteristic: ENA last update

characteristic: External Id

text: Queens Medical Centre, Clinical Microbiology Department / DeepSeq Nottingham

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: isolate

text: not provided

characteristic: title

text: not provided

characteristic: virus identifier


characteristic: ENA-CHECKLIST

text: Barts Health NHS Trust

text: Barts Health NHS Trust

text: public

tag: Namespace:Barts Health NHS Trust

text: COVID-19 Genomics UK Consortium

characteristic: broker name

text: Barts Health NHS Trust

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: organism

characteristic: receipt date

text: not provided

text: not provided


characteristic: ENA first public

characteristic: ENA last update

characteristic: External Id

text: Liverpool Clinical Laboratories

characteristic: INSDC center alias

text: Liverpool Clinical Laboratories

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: COVID-19 Genomics UK Consortium

text: Liverpool Clinical Laboratories

text: not provided

text: not provided

text: United Kingdom

text: England

text: not provided

text: not provided

text: Human

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

characteristic: isolate

characteristic: sample capture status

text: not provided

characteristic: serotype (required for a seropositive sample)

text: not provided


characteristic: ENA-CHECKLIST

text: public

text: COVID-19 Genomics UK Consortium

characteristic: broker name

characteristic: collecting institution

characteristic: collection date

text: not provided

characteristic: collector name

text: not provided

characteristic: definition for seropositive sample

text: United Kingdom

characteristic: geographic location (country and/or sea)

text: England

characteristic: geographic location (region and locality)

text: not provided

characteristic: host common name

text: not provided

characteristic: host health state

text: Human

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

text: not provided

characteristic: title

text: not provided

characteristic: virus identifier