characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Sp1(E-3) is a mouse monoclonal antibody raised against amino acids 121-345 mapping near the N-terminus of Sp1 ofhuman origin. Recommended for detection of Sp1 of m, r and h origin by WB, IP, IF and ELISA. Antibody Target: SP1

text: SP1 is a transcription factor that binds to GC box promoters elements and selectively activates mRNA synthesis from genes that contain functional recognition sites. It can interact with G/C-rich motifs from the serotonin receptor promoter.

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

text: M

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

text: MACS

text: HudsonAlpha_ChipSeq_A549_SP1_EtOH_0.02pct_v042211.1

text: 1 h with 0.02% Ethanol (Myers)


status: PUBLIC

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: RevXlinkChromatin

tag: attribute

characteristic: antibody

text: ATCC

characteristic: cell

text: hepatocellular carcinoma

characteristic: cell description

text: cancer

characteristic: cell karyotype

text: endoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: M

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: organism

characteristic: protocol

text: Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)

characteristic: protocol description

characteristic: replicate

text: HudsonAlpha_ChipSeq_HepG2_RevXlinkChromatin_v042211.1

characteristic: title

text: No special treatment or protocol applies

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: RevXlinkChromatin

text: WiCell Research Institute

characteristic: biomaterial provider

text: embryonic stem cells

text: normal

text: inner cell mass

text: human

text: M

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

text: HudsonAlpha_ChipSeq_H1-hESC_RevXlinkChromatin_v042211.1


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Rabbit polyclonal, Sin3A (k-20). Antibody Target: SIN3AK20

characteristic: antibody antibodydescription

text: Co-repressor interacting with HDAC1, N-coR, SMRT, and MeCP2

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

text: F

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: organism

text: 2x10^7 cells, fragmentation by bioruptor, one 15-cycle round of PCR (Myers)

text: MACS

characteristic: softwareversion

text: SK-N-SH

text: HudsonAlpha_ChipSeq_SK-N-SH_Sin3Ak-20_v041610.1


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Mouse monoclonal to RNA polymerase II CTD repeat YSPTSPS antibody (4H8) - ChIP Grade. Antibody Target: POL2

text: This gene encodes the largest subunit of RNA polymerase II, the polymerase responsible for synthesizing messenger RNA in eukaryotes

text: abcam

text: ATCC

text: F

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: protocol

characteristic: protocol description

characteristic: replicate

text: MACS

text: SK-N-SH

text: HudsonAlpha_ChipSeq_SK-N-SH_Pol2-4H8_v041610.1

characteristic: title

characteristic: treatment description


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: RevXlinkChromatin

characteristic: antibody

text: ATCC

characteristic: biomaterial provider

characteristic: cell

text: epithelial cell line derived from a lung carcinoma tissue. (PMID: 175022), This line was initiated in 1972 by D.J. Giard, et al. through explant culture of lung carcinomatous tissue from a 58-year-old caucasian male. - ATCC, newly promoted to tier 2: not in 2011 analysis

characteristic: cell description

text: cancer

characteristic: cell karyotype

text: endoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: M

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

text: HudsonAlpha_ChipSeq_A549_RevXlinkChromatin_EtOH_0.02pct_v042211.1

characteristic: treatment

text: 1 h with 0.02% Ethanol (Myers)


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: antibody antibodydescription

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: abcam

characteristic: antibody vendorname

text: ATCC

text: M

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: organism

characteristic: protocol

characteristic: protocol description

characteristic: replicate

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_PFSK-1_Pol2-4H8_v041610.1


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Goat polyclonal IgG, epitope mapping at the N-terminus of CTCF of human origin. Antibody Target: CTCF

text: This gene is a member of the BORIS + CTCF gene family and encodes a transcriptional regulator protein with 11 highly conserved zinc finger (ZF) domains. This nuclear protein is able to use different combinations of the ZF domains to bind different DNA target sequences and proteins. (provided by RefSeq)

text: Santa Cruz Biotechnology

text: ATCC

characteristic: biomaterial provider

text: F

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

text: one 15-cycle round of PCR (Myers)

text: MACS

text: HudsonAlpha_ChipSeq_K562_CTCF_(SC-5916)_PCR1x

characteristic: title

characteristic: treatment description


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: antibody antibodydescription

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: abcam

characteristic: antibody vendorname

text: ATCC

text: M

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

text: Homo sapiens

text: 2x10^7 cells, fragmentation by probe-in sonicator, one 15-cycle round of PCR (Myers)

text: MACS

text: HudsonAlpha_ChipSeq_HepG2_Pol2-4H8_v041610.2


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: GABP

characteristic: antibody

text: Mouse monoclonal, GABPa(G-1), IgG1. Antibody Target: GABP

text: The transcription factor GA-binding protein (GABP) is composed of two subunits, alpha and beta. Alpha binds to a specific DNA sequence.

text: Santa Cruz Biotechnology

text: ATCC

characteristic: biomaterial provider

text: F

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: organism

characteristic: protocol

text: Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)

characteristic: protocol description

characteristic: replicate

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_HL-60_GABP_v042211.1

text: No special treatment or protocol applies


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Rabbit affinity purified polyclonal antibody. Epitope is the C-terminus of human estrogen receptor alpha (ESR1). Recommended for detection of estrogen receptor of m, r and h origin by WB, IP, IF, IHC(P) and ELISA. Antibody Target: ESR1

characteristic: antibody antibodydescription

text: This gene encodes an estrogen receptor, a ligand-activated transcription factor composed of several domains important for hormone binding, DNA binding, and activation of transcription. The protein localizes to the nucleus where it may form a homodimer or a heterodimer with estrogen receptor 2. Estrogen and its receptors are essential for sexual development and reproductive function, but also play a role in other tissues such as bone. Estrogen receptors are also involved in pathological processes including breast cancer, endometrial cancer, and osteoporosis. Alternative splicing results in several transcript variants, which differ in their 5-prime UTRs and use different promoters. (provided by RefSeq)

text: Santa Cruz Biotechnology

text: ATCC

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

text: MACS

text: HudsonAlpha_ChipSeq_T-47D_ERalpha_a_BPA_100nM_v041610.2

characteristic: title

characteristic: treatment

text: 1 h with 100 nM Bisphenol A (Myers)

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Mouse monoclonal to RNA polymerase II CTD repeat YSPTSPS antibody (4H8) - ChIP Grade. Antibody Target: POL2

text: This gene encodes the largest subunit of RNA polymerase II, the polymerase responsible for synthesizing messenger RNA in eukaryotes

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: abcam

characteristic: antibody vendorname

text: Lonza

characteristic: biomaterial provider

text: U

characteristic: cell sex

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

text: Homo sapiens

text: 2x10^7 cells, fragmentation by bioruptor, one 15-cycle round of PCR (Myers)

text: MACS

text: HUVEC

text: HudsonAlpha_ChipSeq_HUVEC_Pol2-4H8_v041610.1


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Goat polyclonal IgG, epitope mapping at the C-terminus of HDAC2 of human origin. Antibody Target: HDAC2

characteristic: antibody antibodydescription

text: This gene product belongs to the histone deacetylase family. Histone deacetylases act via the formation of large multiprotein complexes, and are responsible for the deacetylation of lysine residues at the N-terminal regions of core histones (H2A, H2B, H3 and H4). This protein forms transcriptional repressor complexes by associating with many different proteins, including YY1, a mammalian zinc-finger transcription factor. (provided by RefSeq)

text: Santa Cruz Biotechnology

text: ATCC

text: F

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: datatype description

text: Homo sapiens

characteristic: organism

characteristic: protocol

characteristic: protocol description

characteristic: replicate

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_MCF-7_HDAC2_(SC-6296)_v042211.1


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Mouse monoclonal IgG, raised against recombinant HNF-3a of human origin. Antibody Target: FOXA1

text: This gene encodes a member of the forkhead class of DNA-binding proteins. These hepatocyte nuclear factors are transcriptional activators for liver-specific transcripts such as albumin and transthyretin, and they also interact with chromatin. Similar family members in mice have roles in the regulation of metabolism and in the differentiation of the pancreas and liver. (provided by RefSeq)

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

text: M

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: labexpid

text: Homo sapiens

text: 2x10^7 cells, fragmentation by probe-in sonicator, one 15-cycle round of PCR (Myers)

text: MACS

text: HudsonAlpha_ChipSeq_A549_FOXA1_(SC-101058)_DEX_100nM_v041610.2

characteristic: title

characteristic: treatment

text: 1 h with 100 nM Dexamethasone (Myers)

characteristic: treatment description


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Rabbit Polyclonal. Antibody Target: P300

characteristic: antibody antibodydescription

text: Santa Cruz Biotechnology

text: ATCC

characteristic: biomaterial provider

text: M

characteristic: cell sex

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: Homo sapiens

characteristic: organism

text: Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)

text: MACS

text: HudsonAlpha_ChipSeq_A549_p300_EtOH_0.02pct_v042211.1

text: 1 h with 0.02% Ethanol (Myers)


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Rabbit polyclonal, USF-1 (C-20). Antibody Target: USF1

text: The ubiquitously expressed cellular upstream stimulatory factor (USF) consists of USF-1 and USF-2 polypeptides which independently exhibit site-specific DNA binding and are members of the c-Myc-related family of regulatory factors containing helix-loop-helix domains. USF also contains a leucine repeat that is required for efficient DNA binding. USF was originally identified as an up- stream stimulatory factor that binds the core sequence CACGTG in the adeno- virus late promoter. These findings, together with the demonstration of coop- erative interaction between USF and the initiator-binding protein, TFII-I, raises the possibility of a more general involvement of USF in transcriptional regula- tion. While expression of both USF-1 and USF-2 species is ubiquitous, different ratios of USF homo- and heterodimers are found in different cell types.

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

text: M

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: protocol

characteristic: protocol description

characteristic: replicate

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_A549_USF-1_EtOH_0.02pct_v042211.1

text: 1 h with 0.02% Ethanol (Myers)


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Rabbit polyclonal IgG. Antibody Target: ETS1

characteristic: antibody antibodydescription

text: ETS transcriptions factors, such as ETS1, regulate numerous genes and are involved in stem cell development, cell senescence and death, and tumorigenesis

text: Santa Cruz Biotechnology

text: ATCC

characteristic: biomaterial provider

text: M

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: labexpid

text: Homo sapiens

text: MACS

text: HudsonAlpha_ChipSeq_A549_ETS1_EtOH_0.02pct_v042211.1

characteristic: title

characteristic: treatment

text: 1 h with 0.02% Ethanol (Myers)

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: mouse monoclonal, clone 8WG16. Antibody Target: POL2

text: RNA Polymerase II

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Covance

characteristic: antibody vendorname

text: Lonza

text: U

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: Homo sapiens

characteristic: organism

text: one 15-cycle round of PCR (Myers)

text: MACS

text: HUVEC

text: No special treatment or protocol applies


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Goat polyclonal IgG, epitope mapping at the C-terminus of LRF of human origin. Antibody Target: ZBTB7A

characteristic: antibody antibodydescription

text: Plays a key role in the instruction of early lymphoid progenitors to develop into B lineage by repressing T-cell instructive Notch signals (By similarity).

text: Santa Cruz Biotechnology

text: ATCC

characteristic: biomaterial provider

text: M

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: protocol

text: 2x10^7 cells, fragmentation by bioruptor, one 15-cycle round of PCR (Myers)

characteristic: protocol description

characteristic: replicate

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_HepG2_ZBTB7A_(SC-34508)_v041610.1


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Kaiso (6F8) Mouse monoclonal IgG1. Raised against amino acids 1-504 representing full length Kaiso of human origin. Recommended for detection of Kaiso of m, r, h, canine and chicken origin by WB, IP, IF and ELISA. Antibody Target: ZBTB33

text: KAISO is a transcriptional regulator that binds, via its zinc fingers, to DNA sequences containing methylated CGCG or to the consensus KAISO-binding site (KBS) TCCTGCNA

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

text: M

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: labexpid

text: Homo sapiens

text: MACS

text: HudsonAlpha_ChipSeq_A549_ZBTB33_EtOH_0.02pct_v042211.1

characteristic: title

characteristic: treatment

text: 1 h with 0.02% Ethanol (Myers)

characteristic: treatment description


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: GABP

text: Mouse monoclonal, GABPa(G-1), IgG1. Antibody Target: GABP

characteristic: antibody antibodydescription

text: The transcription factor GA-binding protein (GABP) is composed of two subunits, alpha and beta. Alpha binds to a specific DNA sequence.

text: Santa Cruz Biotechnology

text: ATCC

characteristic: biomaterial provider

text: M

characteristic: cell sex

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: Homo sapiens

characteristic: organism

text: Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)

text: MACS

text: HudsonAlpha_ChipSeq_A549_GABP_EtOH_0.02pct_v042211.1

text: 1 h with 0.02% Ethanol (Myers)


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Rabbit polyclonal IgG, epitope mapping at the C-terminus of MEF-2 of human origin. Antibody Target: MEF2A

text: The protein encoded by this gene is a DNA-binding transcription factor that activates many muscme-specific, growth factor-induced, and stress-induced genes.

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

text: F

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: protocol

characteristic: protocol description

characteristic: replicate

text: MACS

characteristic: softwareversion

text: SK-N-SH

text: HudsonAlpha_ChipSeq_SK-N-SH_MEF2A_v042211.1


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Max

text: Rabbit polyclonal IgG, epitope mapping at the C-terminus of Max of human origin. Antibody Target: Max

characteristic: antibody antibodydescription

text: The protein encoded by this gene is a member of the basic helix-loop-helix leucine zipper (bHLHZ) family of transcription factors. It is able to form homodimers and heterodimers with other family members, which include Mad, Mxi1 and Myc. Myc is an oncoprotein implicated in cell proliferation, differentiation and apoptosis. The homodimers and heterodimers compete for a common DNA target site (the E box) and rearrangement among these dimer forms provides a complex system of transcriptional regulation. Multiple alternatively spliced transcript variants have been described for this gene but the full-length nature for some of them is unknown (RefSeq).

text: Santa Cruz Biotechnology

text: ATCC

characteristic: biomaterial provider

text: F

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: labexpid

text: Homo sapiens

text: MACS

text: SK-N-SH

text: HudsonAlpha_ChipSeq_SK-N-SH_Max_v042211.1

characteristic: title

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Rabbit polyclonal, USF-1 (C-20). Antibody Target: USF1

text: The ubiquitously expressed cellular upstream stimulatory factor (USF) consists of USF-1 and USF-2 polypeptides which independently exhibit site-specific DNA binding and are members of the c-Myc-related family of regulatory factors containing helix-loop-helix domains. USF also contains a leucine repeat that is required for efficient DNA binding. USF was originally identified as an up- stream stimulatory factor that binds the core sequence CACGTG in the adeno- virus late promoter. These findings, together with the demonstration of coop- erative interaction between USF and the initiator-binding protein, TFII-I, raises the possibility of a more general involvement of USF in transcriptional regula- tion. While expression of both USF-1 and USF-2 species is ubiquitous, different ratios of USF homo- and heterodimers are found in different cell types.

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

text: ATCC

text: M

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: Homo sapiens

characteristic: organism

text: MACS

text: HudsonAlpha_ChipSeq_HCT-116_USF-1_v042211.1

text: No special treatment or protocol applies


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Mouse monoclonal IgG, specific for an epitope mapping between amino acids 13-44 at the N-terminus of NR2F2 of human origin. Antibody Target: NR2F2

characteristic: antibody antibodydescription

text: This gene encodes a member of the steroid thyroid hormone superfamily of nuclear receptors. The encoded protein is a ligand inducible transcription factor that is involved in the regulation of many different genes. Alternate splicing results in multiple transcript variants. (provided by RefSeq)

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

text: F

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: protocol

characteristic: protocol description

characteristic: replicate

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_MCF-7_NR2F2_(SC-271940)_v042211.1


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Mouse monoclonal IgG, N-terminal epitope corresponding to residues 37-51 of PML of human origin. Antibody Target: PML

text: The protein encoded by this gene is a member of the tripartite motif (TRIM) family. The TRIM motif includes three zinc-binding domains, a RING, a B-box type 1 and a B-box type 2, and a coiled-coil region. This phosphoprotein localizes to nuclear bodies where it functions as a transcription factor and tumor suppressor. Its expression is cell-cycle related and it regulates the p53 response to oncogenic signals. The gene is often involved in the translocation with the retinoic acid receptor alpha gene associated with acute promyelocytic leukemia (APL). Extensive alternative splicing of this gene results in several variations of the protein's central and C-terminal regions; all variants encode the same N-terminus. Alternatively spliced transcript variants encoding different isoforms have been identified. (provided by RefSeq)

characteristic: antibody targetdescription

text: Santa Cruz Biotechnology

text: ATCC

characteristic: biomaterial provider

text: F

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: labexpid

text: Homo sapiens

text: MACS

text: HudsonAlpha_ChipSeq_MCF-7_PML_(SC-71910)_v042211.1

characteristic: title

characteristic: treatment description


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: SRF

text: Rabbit polyclonal. Antibody Target: SRF

characteristic: antibody antibodydescription

text: Serum response transcription factor

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

text: ATCC

text: F

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: Homo sapiens

characteristic: organism

text: Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)

text: MACS


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Fra-2(Q-20) is an affinity purified rabbit polyclonal raised against the N-terminus of Fra-2 of human origin. Recommended for detection of Fra-2 of m, r, h and chicken origin by WB, IP, IF, IHC(P) and ELISA. Antibody Target: FOSL2

text: Rabbit polyclonal. Fra-2(Q-20) is an affinity purified raised against the N-terminus of Fra-2 of human origin. Recommended for detection of Fra-2 of m, r, h and chicken origin by WB, IP, IF, IHC(P) and ELISA. Antibody Target: FOSL2

text: The Fos gene family consists of 4 members: FOS, FOSB, FOSL1, and FOSL2. These genes encode leucine zipper proteins that can dimerize with proteins of the JUN family, thereby forming the transcription factor complex AP-1. As such, the FOS proteins have been implicated as regulators of cell proliferation, differentiation, and transformation.

characteristic: antibody targetdescription

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

text: F

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: protocol

characteristic: protocol description

characteristic: replicate

text: MACS

characteristic: softwareversion

text: SK-N-SH

text: HudsonAlpha_ChipSeq_SK-N-SH_FOSL2_v042211.1


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: NRSF

text: Mouse monoclonal. Antibody Target: NRSF

characteristic: antibody antibodydescription

text: Neuron-restrictive silencer transcription factor

text: (Made by Protein Expression Center: pec@caltech.edu)

text: Dr. David Anderson at Caltech

text: David Anderson, Caltech

text: ATCC

characteristic: biomaterial provider

text: F

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: labexpid

text: Homo sapiens

text: MACS

text: HudsonAlpha_ChipSeq_ECC-1_NRSF_v042211.1

characteristic: title

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: HEB (A-20) Rabbit polyclonal IgG, 200 ?g/ml. Epitope mapping within the C-terminus of HEB of human origin. Antibody Target: TCF12

text: The protein encoded by this gene is a member of the basic helix-loop-helix (bHLH) E-protein family that recognizes the consensus binding site (E-box) CANNTG. This encoded protein is expressed in many tissues, among them skeletal muscle, thymus, B- and T-cells, and may participate in regulating lineage-specific gene expression through the formation of heterodimers with other bHLH E-proteins. Several alternatively spliced transcript variants of this gene have been described, but the full-length nature of some of these variants has not been determined.

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

text: ATCC

text: F

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: Homo sapiens

characteristic: organism

text: MACS

text: HudsonAlpha_ChipSeq_ECC-1_TCF12_v042211.1


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Rabbit Polyclonal IgG. Antibody Target: PU1

characteristic: antibody antibodydescription

text: PU.1 (H-135)

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

text: F

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: protocol

characteristic: protocol description

characteristic: replicate

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_HL-60_PU.1_v042211.1

text: No special treatment or protocol applies


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Rabbit polyclonal, EGR-1 (588). Antibody Target: EGR1

text: Egr-1, Egr-2, Egr-3 and Egr-4 are nuclear transcription factors belonging to the Egr C2H2-type zinc-finger protein family and containing three C2H2-type zinc fingers. As immediate early proteins, Egr transcription factors are rapidly induced by diverse extracellular stimuli. Egr proteins are subject to tight differential control through diverse mechanisms at several levels of regulation including transcriptional, translational and post-translational (including glyco- sylation, phosphorylation and redox) mechanisms and protein-protein inter- action. Egr-1 binds to the DNA sequence 5'-CGCCCCCGC-3' (EGR-site), there- by activating transcription of target genes whose products are required for mitogenisis and differentiation. Egr-2 binds specific DNA sites located in the promoter region of HoxA4. Egr-2 defects cause congenital hypomyelination neuropathy (also designated Charcot-Marie-tooth disease) and Dejerine- Sottas neuropathology (also designated hereditary motor and sensory neuro- pathy III. Egr-3 is involved in muscle spindle development and is expressed in T cells 20 minutes following activation. EGR-4 binds to the EGR consensus motif GCGTGGGCG, functions as a transcriptional repressor, and displays autoregulatory activities, downregulating its on gene promoter in a dose dependent manner.

characteristic: antibody targetdescription

text: Santa Cruz Biotechnology

text: ATCC

characteristic: biomaterial provider

text: F

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: labexpid

text: Homo sapiens

text: MACS

text: HudsonAlpha_ChipSeq_MCF-7_Egr-1_v042211.1

characteristic: title

characteristic: treatment description


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Mouse monoclonal IgG, raised against recombinant protein TEF-3 (TEAD4) of human origin. Antibody Target: TEAD4

characteristic: antibody antibodydescription

text: Member of the transcriptional enhancer factor (TEF) family of transcription factors, which contain the TEA/ATTS DNA-binding domain. It is preferentially expressed in the skeletal muscle, and binds to the M-CAT regulatory element found in promoters of muscle-specific genes to direct their gene expression.

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

text: WiCell Research Institute

text: M

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: Homo sapiens

characteristic: organism

text: Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)

text: MACS

text: HudsonAlpha_ChipSeq_H1-hESC_TEAD4_(SC-101184)_v042211.1


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: JunD

characteristic: antibody

text: rabbit polyclonal IgG. Antibody Target: JunD

text: The protein encoded by this intronless gene is a member of the JUN family, and a functional component of the AP1 transcription factor complex. It has been proposed to protect cells from p53-dependent senescence and apoptosis. Alternate translation initiation site usage results in the production of different isoforms. (provided by RefSeq)

characteristic: antibody targetdescription

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

text: M

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: protocol

characteristic: protocol description

characteristic: replicate

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_HCT-116_JunD_v042211.1


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: antibody antibodydescription

text: Santa Cruz Biotechnology

text: ATCC

characteristic: biomaterial provider

text: M

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: labexpid

text: Homo sapiens

text: MACS

text: HudsonAlpha_ChipSeq_HCT-116_Egr-1_v042211.1

characteristic: title

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Rabbit polyclonal. Antibody Target: RAD21

text: Synthetic peptide (Human) conjugated to KLH - which represents a portion of human Rad21 encoded within exon 14

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: abcam

text: ATCC

text: M

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: Homo sapiens

characteristic: organism

text: MACS

text: HudsonAlpha_ChipSeq_HCT-116_Rad21_v042211.1


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Mouse monoclonal IgG, raised against a recombinant protein corresponding to an internal region of TRIM28 of human origin. Antibody Target: TRIM28

characteristic: antibody antibodydescription

text: The protein encoded by this gene mediates transcriptional control by interaction with the Kruppel-associated box repression domain found in many transcription factors. The protein localizes to the nucleus and is thought to associate with specific chromatin regions. The protein is a member of the tripartite motif family. This tripartite motif includes three zinc-binding domains, a RING, a B-box type 1 and a B-box type 2, and a coiled-coil region. (provided by RefSeq)

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

text: F

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: protocol

characteristic: protocol description

characteristic: replicate

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_K562_TRIM28_(SC-81411)_v042211.1


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Rabbit polyclonal IgG, epitope mapping at the C-terminus of CEBPB of rat origin. Antibody Target: CEBPB

text: The protein encoded by this intronless gene is a bZIP transcription factor which can bind as a homodimer to certain DNA regulatory regions. It can also form heterodimers with the related proteins CEBP-alpha, CEBP-delta, and CEBP-gamma. The encoded protein is important in the regulation of genes involved in immune and inflammatory responses and has been shown to bind to the IL-1 response element in the IL-6 gene, as well as to regulatory regions of several acute-phase and cytokine genes. In addition, the encoded protein can bind the promoter and upstream element and stimulate the expression of the collagen type I gene (provided by RefSeq).

characteristic: antibody targetdescription

text: Santa Cruz Biotechnology

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM12878

characteristic: biomaterial provider

text: F

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: labexpid

text: Homo sapiens

text: MACS

text: HudsonAlpha_ChipSeq_GM12878_CEBPB_(SC-150)_v042211.1

characteristic: title

text: No special treatment or protocol applies

characteristic: treatment description


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: SRF

text: Rabbit polyclonal. Antibody Target: SRF

characteristic: antibody antibodydescription

text: Serum response transcription factor

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

text: ATCC

text: M

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: Homo sapiens

characteristic: organism

text: Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)

text: MACS

text: HudsonAlpha_ChipSeq_HCT-116_SRF_v042211.1


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

characteristic: antibody targetdescription

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

text: M

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: protocol

characteristic: protocol description

characteristic: replicate

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_HCT-116_CEBPB_(SC-150)_v042211.1


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: RevXlinkChromatin

text: ATCC

characteristic: biomaterial provider

characteristic: cell

text: pancreatic carcinoma, (PMID: 1140870) PANC-1 was established from a pancreatic carcinoma, which was extracted via pancreatico-duodenectomy specimen from a 56-year-old Caucasian individual. Malignancy of this cell line was verified via in vitro and in vivo assays.

characteristic: cell description

text: cancer

characteristic: cell karyotype

text: endoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: M

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: labexpid

text: Homo sapiens

text: HudsonAlpha_ChipSeq_PANC-1_RevXlinkChromatin_v042211.1

characteristic: title

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: RevXlinkChromatin

characteristic: antibody

text: ATCC

text: mammary gland, adenocarcinoma. (PMID: 4357757), newly promoted to tier 2: not in 2011 analysis

text: cancer

text: ectoderm

text: human

text: F

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: Homo sapiens

characteristic: organism

characteristic: protocol

characteristic: protocol description

characteristic: replicate

text: HudsonAlpha_ChipSeq_MCF-7_RevXlinkChromatin_v042211.1


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Mouse monoclonal IgG, raised against a recombinant protein corresponding to an internal region of NF-1 of human origin. Antibody Target: NFIC

characteristic: antibody antibodydescription

text: Recognizes and binds the palindromic sequence 5'-TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication.

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

text: F

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_ECC-1_NFIC_(SC-81335)_v042211.1


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Rabbit polyclonal IgG, epitope mapping at the C-terminus of FOXM1 of human origin. Antibody Target: FOXM1

text: The protein encoded by this gene is a transcriptional activator involved in cell proliferation. The encoded protein is phosphorylated in M phase and regulates the expression of several cell cycle genes, such as cyclin B1 and cyclin D1. Several transcript variants encoding different isoforms have been found for this gene. (provided by RefSeq, Jul 2011)

text: Santa Cruz Biotechnology

text: ATCC

text: F

characteristic: cell sex

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: labexpid

text: Homo sapiens

text: MACS

text: HudsonAlpha_ChipSeq_ECC-1_FOXM1_(SC-502)_v042211.1

characteristic: title

characteristic: treatment description


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Mouse monoclonal IgG1; raised against amino acids 254-327 mapping within the DNA binding and dimerization domain of human CREB-1. Antibody Target: CREB1

characteristic: antibody antibodydescription

text: This gene encodes a transcription factor that is a member of the leucine zipper family of DNA binding proteins. This protein binds as a homodimer to the cAMP-responsive element, an octameric palindrome. The protein is phosphorylated by several protein kinases, and induces transcription of genes in response to hormonal stimulation of the cAMP pathway. Alternate splicing of this gene results in two transcript variants encoding different isoforms. (provided by RefSeq)

text: Santa Cruz Biotechnology

text: ATCC

text: F

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: datatype description

text: Homo sapiens

characteristic: organism

characteristic: protocol

characteristic: protocol description

characteristic: replicate

text: MACS

text: HudsonAlpha_ChipSeq_ECC-1_CREB1_(SC-240)_v042211.1


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Mouse monoclonal IgG, raised against recombinant protein TEF-3 (TEAD4) of human origin. Antibody Target: TEAD4

text: Member of the transcriptional enhancer factor (TEF) family of transcription factors, which contain the TEA/ATTS DNA-binding domain. It is preferentially expressed in the skeletal muscle, and binds to the M-CAT regulatory element found in promoters of muscle-specific genes to direct their gene expression.

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

text: F

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

text: MACS

characteristic: softwareversion

text: SK-N-SH

text: HudsonAlpha_ChipSeq_SK-N-SH_TEAD4_(SC-101184)_v042211.1

text: No special treatment or protocol applies


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: NRSF

text: Mouse monoclonal. Antibody Target: NRSF

characteristic: antibody antibodydescription

text: Neuron-restrictive silencer transcription factor

text: (Made by Protein Expression Center: pec@caltech.edu)

text: Dr. David Anderson at Caltech

text: David Anderson, Caltech

text: ATCC

text: M

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: labexpid

text: Homo sapiens

text: Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)

text: MACS

text: HudsonAlpha_ChipSeq_PANC-1_NRSF_v042211.1

characteristic: title

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

characteristic: antibody targetdescription

text: Santa Cruz Biotechnology

text: ATCC

text: F

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: datatype description

text: Homo sapiens

characteristic: organism

characteristic: protocol

characteristic: protocol description

characteristic: replicate

text: MACS

text: HudsonAlpha_ChipSeq_MCF-7_TEAD4_(SC-101184)_v042211.1


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: HEB (A-20) Rabbit polyclonal IgG, 200 ?g/ml. Epitope mapping within the C-terminus of HEB of human origin. Antibody Target: TCF12

characteristic: antibody antibodydescription

text: The protein encoded by this gene is a member of the basic helix-loop-helix (bHLH) E-protein family that recognizes the consensus binding site (E-box) CANNTG. This encoded protein is expressed in many tissues, among them skeletal muscle, thymus, B- and T-cells, and may participate in regulating lineage-specific gene expression through the formation of heterodimers with other bHLH E-proteins. Several alternatively spliced transcript variants of this gene have been described, but the full-length nature of some of these variants has not been determined.

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

text: F

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_MCF-7_TCF12_v042211.1


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Rabbit polyclonal, Sin3A (k-20). Antibody Target: SIN3AK20

text: Co-repressor interacting with HDAC1, N-coR, SMRT, and MeCP2

characteristic: antibody targetdescription

text: Santa Cruz Biotechnology

text: ATCC

text: F

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: labexpid

text: Homo sapiens

text: MACS

text: HudsonAlpha_ChipSeq_MCF-7_Sin3Ak-20_v042211.1

characteristic: title

characteristic: treatment description


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Max

text: Rabbit polyclonal IgG, epitope mapping at the C-terminus of Max of human origin. Antibody Target: Max

characteristic: antibody antibodydescription

text: The protein encoded by this gene is a member of the basic helix-loop-helix leucine zipper (bHLHZ) family of transcription factors. It is able to form homodimers and heterodimers with other family members, which include Mad, Mxi1 and Myc. Myc is an oncoprotein implicated in cell proliferation, differentiation and apoptosis. The homodimers and heterodimers compete for a common DNA target site (the E box) and rearrangement among these dimer forms provides a complex system of transcriptional regulation. Multiple alternatively spliced transcript variants have been described for this gene but the full-length nature for some of them is unknown (RefSeq).

text: Santa Cruz Biotechnology

text: ATCC

text: F

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: datatype description

text: Homo sapiens

characteristic: organism

characteristic: protocol

characteristic: protocol description

characteristic: replicate

text: MACS


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: GABP

characteristic: antibody

text: Mouse monoclonal, GABPa(G-1), IgG1. Antibody Target: GABP

text: The transcription factor GA-binding protein (GABP) is composed of two subunits, alpha and beta. Alpha binds to a specific DNA sequence.

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

text: F

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_MCF-7_GABP_v042211.1


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Max

characteristic: antibody antibodydescription

text: Santa Cruz Biotechnology

text: ATCC

text: M

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: labexpid

text: Homo sapiens

text: MACS

characteristic: title

text: No special treatment or protocol applies

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: RevXlinkChromatin

characteristic: antibody

text: ATCC

characteristic: cell

text: epithelial cell line derived from a lung carcinoma tissue. (PMID: 175022), This line was initiated in 1972 by D.J. Giard, et al. through explant culture of lung carcinomatous tissue from a 58-year-old caucasian male. - ATCC, newly promoted to tier 2: not in 2011 analysis

characteristic: cell description

text: cancer

characteristic: cell karyotype

text: endoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: M

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: datatype description

text: Homo sapiens

characteristic: organism

characteristic: protocol

characteristic: protocol description

characteristic: replicate

text: HudsonAlpha_ChipSeq_A549_RevXlinkChromatin_v042211.1


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: RevXlinkChromatin

text: Coriell

characteristic: biomaterial provider

text: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus

text: normal

text: mesoderm

text: human

text: F

characteristic: cell sex

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: labexpid

text: Homo sapiens

text: Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)

text: HudsonAlpha_ChipSeq_GM12878_RevXlinkChromatin_v042211.1

characteristic: title


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Mouse monoclonal IgG, raised against recombinant protein TEF-3 (TEAD4) of human origin. Antibody Target: TEAD4

characteristic: antibody antibodydescription

text: Member of the transcriptional enhancer factor (TEF) family of transcription factors, which contain the TEA/ATTS DNA-binding domain. It is preferentially expressed in the skeletal muscle, and binds to the M-CAT regulatory element found in promoters of muscle-specific genes to direct their gene expression.

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

text: M

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_A549_TEAD4_(SC-101184)_v042211.1

characteristic: treatment description


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: NRSF

text: Mouse monoclonal. Antibody Target: NRSF

text: Neuron-restrictive silencer transcription factor

text: (Made by Protein Expression Center: pec@caltech.edu)

text: Dr. David Anderson at Caltech

text: David Anderson, Caltech

text: ATCC

characteristic: biomaterial provider

text: M

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: datatype description

text: Homo sapiens

characteristic: organism

characteristic: protocol

characteristic: protocol description

characteristic: replicate

text: MACS

text: HudsonAlpha_ChipSeq_HCT-116_NRSF_v042211.1


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: RevXlinkChromatin

characteristic: antibody

text: ATCC

characteristic: cell

text: promyelocytic leukemia cells, (PMID: 276884)

characteristic: cell description

text: cancer

characteristic: cell karyotype

text: mesoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: F

characteristic: cell sex

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: labexpid

text: Homo sapiens

text: HudsonAlpha_ChipSeq_HL-60_RevXlinkChromatin_v042211.1

characteristic: title


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Rabbit polyclonal IgG, epitope mapping at the C-terminus of CEBPB of rat origin. Antibody Target: CEBPB

characteristic: antibody antibodydescription

text: The protein encoded by this intronless gene is a bZIP transcription factor which can bind as a homodimer to certain DNA regulatory regions. It can also form heterodimers with the related proteins CEBP-alpha, CEBP-delta, and CEBP-gamma. The encoded protein is important in the regulation of genes involved in immune and inflammatory responses and has been shown to bind to the IL-1 response element in the IL-6 gene, as well as to regulatory regions of several acute-phase and cytokine genes. In addition, the encoded protein can bind the promoter and upstream element and stimulate the expression of the collagen type I gene (provided by RefSeq).

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

text: M

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: datatype description

text: Homo sapiens

characteristic: organism

characteristic: protocol

characteristic: protocol description

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_A549_CEBPB_(SC-150)_v042211.1

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: RevXlinkChromatin

characteristic: antibody

text: ATCC

characteristic: cell

text: colorectal carcinoma (PMID: 7214343)

characteristic: cell description

text: cancer

characteristic: cell karyotype

text: endoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: M

characteristic: cell sex

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: labexpid

text: Homo sapiens

characteristic: replicate

text: HudsonAlpha_ChipSeq_HCT-116_RevXlinkChromatin_v042211.1

characteristic: title

text: No special treatment or protocol applies


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: RevXlinkChromatin

text: CDI

characteristic: biomaterial provider

text: neurons derived from H1 embryonic stem cells, newly promoted to tier 2: not in 2011 analysis

text: normal

text: ectoderm

text: human

text: M

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: datatype description

text: Homo sapiens

characteristic: organism

characteristic: protocol

characteristic: protocol description

text: HudsonAlpha_ChipSeq_H1-neurons_RevXlinkChromatin_v042211.1

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: RevXlinkChromatin

characteristic: antibody

text: ATCC

characteristic: cell

text: epithelial cell line derived from an endometrium adenocarcinoma, fetal membranes were collected from women who underwent planned cesarean delivery at term, before labor and without rupture of membranes

characteristic: cell description

text: cancer

characteristic: cell karyotype

text: endoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: F

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

text: Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)

text: HudsonAlpha_ChipSeq_ECC-1_RevXlinkChromatin_v042211.1


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Mouse monoclonal IgG, raised against recombinant protein TEF-3 (TEAD4) of human origin. Antibody Target: TEAD4

characteristic: antibody antibodydescription

text: Member of the transcriptional enhancer factor (TEF) family of transcription factors, which contain the TEA/ATTS DNA-binding domain. It is preferentially expressed in the skeletal muscle, and binds to the M-CAT regulatory element found in promoters of muscle-specific genes to direct their gene expression.

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

text: M

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: labexpid

text: Homo sapiens

characteristic: replicate

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_HepG2_TEAD4_(SC-101184)_v042211.1

characteristic: title


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Mouse monoclonal IgG, raised against a recombinant protein corresponding to an internal region of B-Myb of human origin. Antibody Target: MYBL2

text: The protein encoded by this gene, a member of the MYB family of transcription factor genes, is a nuclear protein involved in cell cycle progression. The encoded protein is phosphorylated by cyclin A/cyclin-dependent kinase 2 during the S-phase of the cell cycle and possesses both activator and repressor activities. It has been shown to activate the cell division cycle 2, cyclin D1, and insulin-like growth factor-binding protein 5 genes. Transcript variants may exist for this gene, but their full-length natures have not been determined. (provided by RefSeq)

text: Santa Cruz Biotechnology

text: ATCC

text: M

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: datatype description

text: Homo sapiens

characteristic: organism

characteristic: protocol

characteristic: protocol description

text: MACS

text: HudsonAlpha_ChipSeq_HepG2_MYBL2_(SC-81192)_v042211.1

characteristic: treatment description


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Mouse monoclonal IgG, raised against a recombinant protein corresponding to an internal region of NF-1 of human origin. Antibody Target: NFIC

characteristic: antibody antibodydescription

text: Recognizes and binds the palindromic sequence 5'-TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication.

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

text: F

characteristic: controlid

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

text: MACS

text: SK-N-SH

text: HudsonAlpha_ChipSeq_SK-N-SH_NFIC_(SC-81335)_v042211.1


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Mouse monoclonal IgG, recommended for the detection of Stat5a and Stat5b of human origin by WB, IP, IF and ELISA. Antibody Target: STAT5A

text: The protein encoded by this gene is a member of the STAT family of transcription factors. In response to cytokines and growth factors, STAT family members are phosphorylated by the receptor associated kinases, and then form homo- or heterodimers that translocate to the cell nucleus where they act as transcription activators. This protein is activated by, and mediates the responses of many cell ligands, such as IL2, IL3, IL7 GM-CSF, erythropoietin, thrombopoietin, and different growth hormones. Activation of this protein in myeloma and lymphoma associated with a TEL/JAK2 gene fusion is independent of cell stimulus and has been shown to be essential for the tumorigenesis. The mouse counterpart of this gene is found to induce the expression of BCL2L1/BCL-X(L), which suggests the antiapoptotic function of this gene in cells. (provided by RefSeq)

text: Santa Cruz Biotechnology

text: ATCC

text: F

characteristic: cell sex

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: labexpid

text: Homo sapiens

characteristic: replicate

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_K562_STAT5A_(SC-74442)_v042211.1

characteristic: title


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Rabbit polyclonal IgG, epitope mapping at the C-terminus of CEBPB of rat origin. Antibody Target: CEBPB

characteristic: antibody antibodydescription

text: The protein encoded by this intronless gene is a bZIP transcription factor which can bind as a homodimer to certain DNA regulatory regions. It can also form heterodimers with the related proteins CEBP-alpha, CEBP-delta, and CEBP-gamma. The encoded protein is important in the regulation of genes involved in immune and inflammatory responses and has been shown to bind to the IL-1 response element in the IL-6 gene, as well as to regulatory regions of several acute-phase and cytokine genes. In addition, the encoded protein can bind the promoter and upstream element and stimulate the expression of the collagen type I gene (provided by RefSeq).

text: Santa Cruz Biotechnology

text: ATCC

text: F

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: datatype description

text: Homo sapiens

characteristic: organism

characteristic: protocol

characteristic: protocol description

text: MACS

text: HudsonAlpha_ChipSeq_K562_CEBPB_(SC-150)_v042211.1

text: No special treatment or protocol applies

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Six5 (K-20) Goat polyclonal IgG, 200?g/ml. Epitope mapping near the C-terminus of Six5 of human origin. Recommended for detection of Six5 of human origin by WB, IF and ELISA. Antibody Target: SIX5

text: The protein encoded by this gene is a homeodomain-containing transcription factor that appears to function in the regulation of organogenesis. This gene is located downstream of the dystrophia myotonica-protein kinase gene. Mutations in this geneare a cause of branchiootorenal syndrome type 2.

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

text: M

characteristic: cell sex

characteristic: controlid

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

text: Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)

text: MACS

text: HudsonAlpha_ChipSeq_A549_SIX5_EtOH_0.02pct_v042211.1

characteristic: treatment

text: 1 h with 0.02% Ethanol (Myers)


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: antibody antibodydescription

text: Santa Cruz Biotechnology

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM12878

text: F

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

characteristic: replicate

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_GM12878_NFIC_(SC-81335)_v042211.1

characteristic: title


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Rabbit polyclonal, Sin3A (k-20). Antibody Target: SIN3AK20

text: Co-repressor interacting with HDAC1, N-coR, SMRT, and MeCP2

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

text: M

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: organism

characteristic: protocol

characteristic: protocol description

text: MACS

text: HudsonAlpha_ChipSeq_A549_Sin3Ak-20_EtOH_0.02pct_v042211.1

text: 1 h with 0.02% Ethanol (Myers)

characteristic: treatment description


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: RevXlinkChromatin

text: ATCC

characteristic: biomaterial provider

text: SK-N-SH

characteristic: cell

text: neuroblastoma, newly promoted to tier 2: not in 2011 analysis, the SK-N-SH line was established from a neuroblastoma in a 4 year old individual.

characteristic: cell description

text: cancer

characteristic: cell karyotype

text: ectoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: F

characteristic: cell sex

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: Homo sapiens

text: SK-N-SH

text: HudsonAlpha_ChipSeq_SK-N-SH_RevXlinkChromatin_v042211.1


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: RevXlinkChromatin

characteristic: antibody

text: ATCC

text: epithelial cell line derived from a mammary ductal carcinoma.

text: cancer

text: human

text: F

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: labexpid

text: Homo sapiens

characteristic: organism

characteristic: protocol

characteristic: protocol description

characteristic: replicate

text: HudsonAlpha_ChipSeq_T-47D_RevXlinkChromatin_v042211.1

characteristic: title


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Mouse monoclonal IgG, raised against recombinant protein TEF-3 (TEAD4) of human origin. Antibody Target: TEAD4

characteristic: antibody antibodydescription

text: Member of the transcriptional enhancer factor (TEF) family of transcription factors, which contain the TEA/ATTS DNA-binding domain. It is preferentially expressed in the skeletal muscle, and binds to the M-CAT regulatory element found in promoters of muscle-specific genes to direct their gene expression.

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

text: F

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_ECC-1_TEAD4_(SC-101184)_v042211.1

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Mouse monoclonal IgG1; raised against amino acids 254-327 mapping within the DNA binding and dimerization domain of human CREB-1. Antibody Target: CREB1

text: This gene encodes a transcription factor that is a member of the leucine zipper family of DNA binding proteins. This protein binds as a homodimer to the cAMP-responsive element, an octameric palindrome. The protein is phosphorylated by several protein kinases, and induces transcription of genes in response to hormonal stimulation of the cAMP pathway. Alternate splicing of this gene results in two transcript variants encoding different isoforms. (provided by RefSeq)

text: Santa Cruz Biotechnology

text: ATCC

text: F

characteristic: cell sex

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

characteristic: organism

text: MACS

text: HudsonAlpha_ChipSeq_K562_CREB1_(SC-240)_v042211.1

text: No special treatment or protocol applies


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Rabbit polyclonal IgG, epitope mapping at the C-terminus of CEBPB of rat origin. Antibody Target: CEBPB

characteristic: antibody antibodydescription

text: The protein encoded by this intronless gene is a bZIP transcription factor which can bind as a homodimer to certain DNA regulatory regions. It can also form heterodimers with the related proteins CEBP-alpha, CEBP-delta, and CEBP-gamma. The encoded protein is important in the regulation of genes involved in immune and inflammatory responses and has been shown to bind to the IL-1 response element in the IL-6 gene, as well as to regulatory regions of several acute-phase and cytokine genes. In addition, the encoded protein can bind the promoter and upstream element and stimulate the expression of the collagen type I gene (provided by RefSeq).

characteristic: antibody targetdescription

text: Santa Cruz Biotechnology

text: ATCC

text: F

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: protocol

text: Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)

characteristic: protocol description

characteristic: replicate

text: MACS

text: HudsonAlpha_ChipSeq_MCF-7_CEBPB_(SC-150)_v042211.1

characteristic: title


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Rabbit polyclonal, USF-1 (C-20). Antibody Target: USF1

text: The ubiquitously expressed cellular upstream stimulatory factor (USF) consists of USF-1 and USF-2 polypeptides which independently exhibit site-specific DNA binding and are members of the c-Myc-related family of regulatory factors containing helix-loop-helix domains. USF also contains a leucine repeat that is required for efficient DNA binding. USF was originally identified as an up- stream stimulatory factor that binds the core sequence CACGTG in the adeno- virus late promoter. These findings, together with the demonstration of coop- erative interaction between USF and the initiator-binding protein, TFII-I, raises the possibility of a more general involvement of USF in transcriptional regula- tion. While expression of both USF-1 and USF-2 species is ubiquitous, different ratios of USF homo- and heterodimers are found in different cell types.

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

text: F

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_ECC-1_USF-1_v042211.1

characteristic: treatment description


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Rabbit Polyclonal IgG. Antibody Target: PBX3

characteristic: antibody antibodydescription

text: Pbx 3 (D-17)

text: Santa Cruz Biotechnology

text: ATCC

text: F

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

characteristic: organism

text: MACS

text: SK-N-SH

text: HudsonAlpha_ChipSeq_SK-N-SH_Pbx3_v042211.1


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Rabbit polyclonal, EGR-1 (588). Antibody Target: EGR1

text: Egr-1, Egr-2, Egr-3 and Egr-4 are nuclear transcription factors belonging to the Egr C2H2-type zinc-finger protein family and containing three C2H2-type zinc fingers. As immediate early proteins, Egr transcription factors are rapidly induced by diverse extracellular stimuli. Egr proteins are subject to tight differential control through diverse mechanisms at several levels of regulation including transcriptional, translational and post-translational (including glyco- sylation, phosphorylation and redox) mechanisms and protein-protein inter- action. Egr-1 binds to the DNA sequence 5'-CGCCCCCGC-3' (EGR-site), there- by activating transcription of target genes whose products are required for mitogenisis and differentiation. Egr-2 binds specific DNA sites located in the promoter region of HoxA4. Egr-2 defects cause congenital hypomyelination neuropathy (also designated Charcot-Marie-tooth disease) and Dejerine- Sottas neuropathology (also designated hereditary motor and sensory neuro- pathy III. Egr-3 is involved in muscle spindle development and is expressed in T cells 20 minutes following activation. EGR-4 binds to the EGR consensus motif GCGTGGGCG, functions as a transcriptional repressor, and displays autoregulatory activities, downregulating its on gene promoter in a dose dependent manner.

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

text: ATCC

text: F

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: protocol

characteristic: protocol description

characteristic: replicate

text: MACS

text: HudsonAlpha_ChipSeq_ECC-1_Egr-1_v042211.1

characteristic: title


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: NRSF

text: Mouse monoclonal. Antibody Target: NRSF

characteristic: antibody antibodydescription

text: Neuron-restrictive silencer transcription factor

text: (Made by Protein Expression Center: pec@caltech.edu)

text: Dr. David Anderson at Caltech

characteristic: antibody vendorname

text: David Anderson, Caltech

text: ATCC

characteristic: biomaterial provider

text: F

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_MCF-7_NRSF_v042211.1

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: JunD

characteristic: antibody

text: rabbit polyclonal IgG. Antibody Target: JunD

text: The protein encoded by this intronless gene is a member of the JUN family, and a functional component of the AP1 transcription factor complex. It has been proposed to protect cells from p53-dependent senescence and apoptosis. Alternate translation initiation site usage results in the production of different isoforms. (provided by RefSeq)

characteristic: antibody targetdescription

text: Santa Cruz Biotechnology

text: ATCC

text: F

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

characteristic: organism

text: MACS

text: HudsonAlpha_ChipSeq_MCF-7_JunD_v042211.1


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Mouse monoclonal IgG, raised against amino acids 191-300 of recombinant RUNX3 of human origin. Antibody Target: RUNX3

characteristic: antibody antibodydescription

text: This gene encodes a member of the runt domain-containing family of transcription factors. A heterodimer of this protein and a beta subunit forms a complex that binds to the core DNA sequence 5'-PYGPYGGT-3' found in a number of enhancers and promoters, and can either activate or suppress transcription. It also interacts with other transcription factors. It functions as a tumor suppressor, and the gene is frequently deleted or transcriptionally silenced in cancer. Multiple transcript variants encoding different isoforms have been found for this gene. (provided by RefSeq)

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM12878

text: F

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: protocol

characteristic: protocol description

characteristic: replicate

text: MACS

text: HudsonAlpha_ChipSeq_GM12878_RUNX3_(SC-101553)_v042211.1

characteristic: title

text: No special treatment or protocol applies


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: RevXlinkChromatin

characteristic: antibody

text: ATCC

characteristic: biomaterial provider

characteristic: cell

text: leukemia, The continuous cell line K-562 was established by Lozzio and Lozzio from the pleural effusion of a 53-year-old female with chronic myelogenous leukemia in terminal blast crises. - ATCC

characteristic: cell description

text: cancer

characteristic: cell karyotype

text: mesoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: F

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

text: Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)

text: HudsonAlpha_ChipSeq_K562_RevXlinkChromatin_v042211.1

characteristic: treatment description


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Mouse monoclonal IgG, raised against recombinant protein TEF-3 (TEAD4) of human origin. Antibody Target: TEAD4

characteristic: antibody antibodydescription

text: Member of the transcriptional enhancer factor (TEF) family of transcription factors, which contain the TEA/ATTS DNA-binding domain. It is preferentially expressed in the skeletal muscle, and binds to the M-CAT regulatory element found in promoters of muscle-specific genes to direct their gene expression.

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

text: F

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

characteristic: organism

characteristic: protocol

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_K562_TEAD4_(SC-101184)_v042211.1


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Mouse monoclonal IgG1; raised against amino acids 254-327 mapping within the DNA binding and dimerization domain of human CREB-1. Antibody Target: CREB1

text: This gene encodes a transcription factor that is a member of the leucine zipper family of DNA binding proteins. This protein binds as a homodimer to the cAMP-responsive element, an octameric palindrome. The protein is phosphorylated by several protein kinases, and induces transcription of genes in response to hormonal stimulation of the cAMP pathway. Alternate splicing of this gene results in two transcript variants encoding different isoforms. (provided by RefSeq)

text: Santa Cruz Biotechnology

text: WiCell Research Institute

characteristic: biomaterial provider

text: M

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: protocol description

characteristic: replicate

text: MACS

text: HudsonAlpha_ChipSeq_H1-hESC_CREB1_(SC-240)_v042211.1

characteristic: title

characteristic: treatment description


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Rabbit polyclonal IgG, epitope mapping at the C-terminus of YY1 of human origin. Antibody Target: YY1

characteristic: antibody antibodydescription

text: YY1 is a ubiquitously distributed transcription factor belonging to the GLI-Kruppel class of zinc finger proteins. The protein is involved in repressing and activating a diverse number of promoters. YY1 may direct histone deacetylases and histone acetyltransferases to a promoter in order to activate or repress the promoter, thus implicating histone modification in the function of YY1

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

text: F

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

text: Homo sapiens

text: MACS

text: SK-N-SH

text: HudsonAlpha_ChipSeq_SK-N-SH_YY1_(SC-281)_v042211.1


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Max

characteristic: antibody

text: Rabbit polyclonal IgG, epitope mapping at the C-terminus of Max of human origin. Antibody Target: Max

text: The protein encoded by this gene is a member of the basic helix-loop-helix leucine zipper (bHLHZ) family of transcription factors. It is able to form homodimers and heterodimers with other family members, which include Mad, Mxi1 and Myc. Myc is an oncoprotein implicated in cell proliferation, differentiation and apoptosis. The homodimers and heterodimers compete for a common DNA target site (the E box) and rearrangement among these dimer forms provides a complex system of transcriptional regulation. Multiple alternatively spliced transcript variants have been described for this gene but the full-length nature for some of them is unknown (RefSeq).

text: Santa Cruz Biotechnology

text: WiCell Research Institute

characteristic: biomaterial provider

text: M

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

characteristic: organism

characteristic: protocol

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_H1-hESC_Max_v042211.1


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Rabbit polyclonal IgG, epitope corresponding to a.a. 232-281 mapping at the C-terminus of E2F-6 of human origin. Antibody Target: E2F6

characteristic: antibody antibodydescription

text: This gene encodes a member of the E2F transcription factor protein family. E2F family members play a crucial role in control of the cell cycle and of the action of tumor suppressor proteins. They are also a target of the transforming proteins of small DNA tumor viruses. Many E2F proteins contain several evolutionarily conserved domains: a DNA binding domain, a dimerization domain which determines interaction with the differentiation regulated transcription factor proteins (DP), a transactivation domain enriched in acidic amino acids, and a tumor suppressor protein association domain which is embedded within the transactivation domain. The encoded protein of this gene is atypical because it lacks the transactivation and tumor suppressor protein association domains. It contains a modular suppression domain and is an inhibitor of E2F-dependent transcription. The protein is part of a multimeric protein complex that contains a histone methyltransferase and the transcription factors Mga and Max. Multiple transcript variants have been reported for this gene, but it has not been clearly demonstrated that they encode valid isoforms (RefSeq).

text: Santa Cruz Biotechnology

text: WiCell Research Institute

text: M

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: protocol description

characteristic: replicate

text: MACS

text: HudsonAlpha_ChipSeq_H1-hESC_E2F6_v042211.1

characteristic: title

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: HEB (A-20) Rabbit polyclonal IgG, 200 ?g/ml. Epitope mapping within the C-terminus of HEB of human origin. Antibody Target: TCF12

text: The protein encoded by this gene is a member of the basic helix-loop-helix (bHLH) E-protein family that recognizes the consensus binding site (E-box) CANNTG. This encoded protein is expressed in many tissues, among them skeletal muscle, thymus, B- and T-cells, and may participate in regulating lineage-specific gene expression through the formation of heterodimers with other bHLH E-proteins. Several alternatively spliced transcript variants of this gene have been described, but the full-length nature of some of these variants has not been determined.

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

text: F

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

text: Homo sapiens

text: Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)

text: MACS

text: SK-N-SH

text: HudsonAlpha_ChipSeq_SK-N-SH_TCF12_v042211.1

text: No special treatment or protocol applies


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: JunD

text: rabbit polyclonal IgG. Antibody Target: JunD

characteristic: antibody antibodydescription

text: The protein encoded by this intronless gene is a member of the JUN family, and a functional component of the AP1 transcription factor complex. It has been proposed to protect cells from p53-dependent senescence and apoptosis. Alternate translation initiation site usage results in the production of different isoforms. (provided by RefSeq)

text: Santa Cruz Biotechnology

text: ATCC

text: F

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

characteristic: organism

characteristic: protocol

text: MACS

characteristic: softwareversion

text: SK-N-SH

text: HudsonAlpha_ChipSeq_SK-N-SH_JunD_v042211.1


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Sp1(E-3) is a mouse monoclonal antibody raised against amino acids 121-345 mapping near the N-terminus of Sp1 ofhuman origin. Recommended for detection of Sp1 of m, r and h origin by WB, IP, IF and ELISA. Antibody Target: SP1

text: SP1 is a transcription factor that binds to GC box promoters elements and selectively activates mRNA synthesis from genes that contain functional recognition sites. It can interact with G/C-rich motifs from the serotonin receptor promoter.

characteristic: antibody targetdescription

text: Santa Cruz Biotechnology

text: ATCC

text: M

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: protocol description

characteristic: replicate

text: MACS

text: HudsonAlpha_ChipSeq_HCT-116_SP1_v042211.1

characteristic: title

characteristic: treatment description


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Goat polyclonal IgG, epitope mapping at the N-terminus of CTCF of human origin. Antibody Target: CTCF

characteristic: antibody antibodydescription

text: This gene is a member of the BORIS + CTCF gene family and encodes a transcriptional regulator protein with 11 highly conserved zinc finger (ZF) domains. This nuclear protein is able to use different combinations of the ZF domains to bind different DNA target sequences and proteins. (provided by RefSeq)

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

text: M

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

text: Homo sapiens

text: MACS

text: HudsonAlpha_ChipSeq_HCT-116_CTCF_(SC-5916)_v042211.1


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Max

characteristic: antibody

text: Rabbit polyclonal IgG, epitope mapping at the C-terminus of Max of human origin. Antibody Target: Max

text: The protein encoded by this gene is a member of the basic helix-loop-helix leucine zipper (bHLHZ) family of transcription factors. It is able to form homodimers and heterodimers with other family members, which include Mad, Mxi1 and Myc. Myc is an oncoprotein implicated in cell proliferation, differentiation and apoptosis. The homodimers and heterodimers compete for a common DNA target site (the E box) and rearrangement among these dimer forms provides a complex system of transcriptional regulation. Multiple alternatively spliced transcript variants have been described for this gene but the full-length nature for some of them is unknown (RefSeq).

characteristic: antibody targetdescription

text: Santa Cruz Biotechnology

text: ATCC

text: M

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

characteristic: organism

characteristic: protocol

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_HCT-116_Max_v042211.1