text: Broad Institute

text: live

text: Generic

text: Mycobacterium tuberculosis HT1138

text: Generic sample from Mycobacterium tuberculosis HT1138


status: PUBLIC

characteristic: External Id

text: Broad Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Mycobacterium tuberculosis HT1156

characteristic: organism

tag: attribute

characteristic: sample name

characteristic: strain

text: Generic sample from Mycobacterium tuberculosis HT1156

characteristic: title


text: Broad Institute

text: live

text: Generic

text: Escherichia coli PBD16

text: Generic sample from Escherichia coli PBD16


text: Broad Institute

text: live

text: Generic

text: Mycobacterium tuberculosis HT1133

text: Generic sample from Mycobacterium tuberculosis HT1133


text: Broad Institute

text: live

text: Generic

text: Mycobacterium tuberculosis HT1149

text: Generic sample from Mycobacterium tuberculosis HT1149


text: Broad Institute

text: live

text: Generic

text: Escherichia coli PBA9

text: Generic sample from Escherichia coli PBA9


text: Broad Institute

text: live

text: Generic

text: Mycobacterium tuberculosis HT1134

text: Generic sample from Mycobacterium tuberculosis HT1134


text: Broad Institute

text: live

text: Generic

text: Escherichia coli PBD24

text: Generic sample from Escherichia coli PBD24


text: Broad Institute

text: live

text: Generic

text: Escherichia coli PBD2

text: Generic sample from Escherichia coli PBD2


text: Broad Institute

text: live

text: Generic

text: Mycobacterium tuberculosis HT1130

text: Generic sample from Mycobacterium tuberculosis HT1130


text: Broad Institute

text: live

text: Generic

text: Mycobacterium tuberculosis HT1172

text: Generic sample from Mycobacterium tuberculosis HT1172


text: Broad Institute

text: live

text: Generic

text: Mycobacterium tuberculosis HT1115

text: Generic sample from Mycobacterium tuberculosis HT1115


text: Broad Institute

text: live

text: Generic

text: Escherichia coli PBD20

text: Generic sample from Escherichia coli PBD20


text: Broad Institute

text: live

text: Generic

text: Escherichia coli PBA5

text: Generic sample from Escherichia coli PBA5


text: Broad Institute

text: live

text: Generic

text: Escherichia coli PBC22

text: Generic sample from Escherichia coli PBC22


text: Broad Institute

text: live

text: Generic

text: Mycobacterium tuberculosis HT1137

text: Generic sample from Mycobacterium tuberculosis HT1137


text: Broad Institute

text: live

text: Generic

text: Escherichia coli PBD7

text: Generic sample from Escherichia coli PBD7


text: Broad Institute

text: live

text: Generic

text: Escherichia coli PBB6

text: Generic sample from Escherichia coli PBB6


text: Broad Institute

text: live

text: Generic

text: Mycobacterium tuberculosis mc(2)6020-B

text: Generic sample from Mycobacterium tuberculosis mc(2)6020-B


text: Broad Institute

text: live

text: Generic

text: Mycobacterium tuberculosis mc(2)6020-A

text: Generic sample from Mycobacterium tuberculosis mc(2)6020-A


text: Broad Institute

text: live

text: Generic

text: Escherichia coli PBD19

text: Generic sample from Escherichia coli PBD19


text: Broad Institute

text: live

text: Generic

text: Escherichia coli PBB4

text: Generic sample from Escherichia coli PBB4


text: Broad Institute

text: live

text: Generic

text: Mycobacterium tuberculosis mc(2)6020-C

text: Generic sample from Mycobacterium tuberculosis mc(2)6020-C


text: Broad Institute

text: live

text: Generic

text: Escherichia coli PBD11

text: Generic sample from Escherichia coli PBD11


text: Broad Institute

text: live

text: Generic

text: Mycobacterium tuberculosis HT1166

text: Generic sample from Mycobacterium tuberculosis HT1166


text: Broad Institute

text: live

text: Generic

text: Mycobacterium tuberculosis HT1114

text: Generic sample from Mycobacterium tuberculosis HT1114


text: Broad Institute

text: live

text: Generic

text: Escherichia coli MV2C11

text: Generic sample from Escherichia coli MV2C11


text: Broad Institute

text: live

text: Generic

text: Mycobacterium tuberculosis HT1132

text: Generic sample from Mycobacterium tuberculosis HT1132


text: Broad Institute

text: live

text: Generic

text: Mycobacterium tuberculosis HT1160

text: Generic sample from Mycobacterium tuberculosis HT1160


text: Broad Institute

text: live

text: Generic

text: Escherichia coli MV1994

text: Generic sample from Escherichia coli MV1994


text: Broad Institute

text: live

text: Generic

text: Escherichia coli PBD1

text: Generic sample from Escherichia coli PBD1


text: Broad Institute

text: live

text: Generic

text: Mycobacterium tuberculosis HT1150

text: Generic sample from Mycobacterium tuberculosis HT1150


text: Broad Institute

text: live

text: Generic

text: Escherichia coli PB10

text: Generic sample from Escherichia coli PB10


text: Broad Institute

text: live

text: Generic

text: Mycobacterium tuberculosis HT1116

text: Generic sample from Mycobacterium tuberculosis HT1116


text: Broad Institute

text: live

text: Generic

text: Mycobacterium tuberculosis HT1131

text: Generic sample from Mycobacterium tuberculosis HT1131


text: Broad Institute

text: live

text: Generic

text: Mycobacterium tuberculosis HT1170

text: Generic sample from Mycobacterium tuberculosis HT1170


text: Broad Institute

text: live

text: Generic

text: Escherichia coli PBC3

text: Generic sample from Escherichia coli PBC3


text: Broad Institute

text: live

text: Generic

text: Mycobacterium tuberculosis HT1171

text: Generic sample from Mycobacterium tuberculosis HT1171


text: Broad Institute

text: live

text: Generic

text: Escherichia coli PBC7

text: Generic sample from Escherichia coli PBC7


text: Broad Institute

text: live

text: Generic

text: Mycobacterium tuberculosis HT1139

text: Generic sample from Mycobacterium tuberculosis HT1139


text: Broad Institute

text: live

text: Generic

text: Mycobacterium tuberculosis HT1121

text: Generic sample from Mycobacterium tuberculosis HT1121


text: Broad Institute

text: live

text: Generic

text: Mycobacterium tuberculosis HT1123

text: Generic sample from Mycobacterium tuberculosis HT1123


text: Broad Institute

text: live

text: Generic

text: Mycobacterium tuberculosis HT1118

text: Generic sample from Mycobacterium tuberculosis HT1118


text: Broad Institute

text: live

text: Generic

text: Escherichia coli PBC6

text: Generic sample from Escherichia coli PBC6


text: Broad Institute

text: live

text: Generic

text: Mycobacterium tuberculosis HT1161

text: Generic sample from Mycobacterium tuberculosis HT1161


text: Broad Institute

text: live

text: Generic

text: Escherichia coli PBD22

text: Generic sample from Escherichia coli PBD22


text: Broad Institute

text: live

text: Generic

text: Escherichia coli PBB13

text: Generic sample from Escherichia coli PBB13


text: Broad Institute

text: live

text: Generic

text: Mycobacterium tuberculosis HT1119

text: Generic sample from Mycobacterium tuberculosis HT1119


text: Broad Institute

text: live

text: Generic

text: Mycobacterium tuberculosis HT1164

text: Generic sample from Mycobacterium tuberculosis HT1164


text: Broad Institute

text: live

text: Generic

text: Mycelium

characteristic: isolation source

text: Fusarium oxysporum PHW808

text: Generic sample from Fusarium oxysporum PHW808


text: Broad Institute

text: live

text: Generic

text: Mycelium

text: Fusarium oxysporum Fo47

text: Soil

characteristic: specific host

text: Generic sample from Fusarium oxysporum Fo47


text: Broad Institute

text: live

text: Generic

text: Mycelium

text: Fusarium oxysporum CL57

text: Generic sample from Fusarium oxysporum CL57


text: Broad Institute

text: live

text: Generic

text: Mycelium

text: Fusarium oxysporum II5

text: Banana

text: Generic sample from Fusarium oxysporum II5


text: Broad Institute

text: live

text: Generic

text: USA

text: Mycelium

text: Fusarium oxysporum MN25

text: Tomato

text: Generic sample from Fusarium oxysporum MN25


text: Broad Institute

text: live

text: Generic

text: mycelium

text: Fusarium oxysporum NRRL 32931

text: Homo sapiens

text: FOSC 3-a

text: Generic sample from Fusarium oxysporum FOSC 3-a


text: Broad Institute

text: live

text: Generic

text: Mycelium

text: Fusarium oxysporum HDV247

text: Pea

text: Generic sample from Fusarium oxysporum HDV247


text: Broad Institute

text: live

text: Generic

text: Mycelium

text: Fusarium oxysporum FOL 4287

text: Tomato

text: FOL 4287

text: Generic sample from Fusarium oxysporum FOL 4287


text: Broad Institute

text: live

text: Generic

text: Mycelium

text: Fusarium oxysporum PHW815

text: Generic sample from Fusarium oxysporum PHW815


text: Broad Institute

text: live

text: Generic

text: Mycelium

text: Fusarium oxysporum Cotton

text: cotton

text: Cotton

text: Generic sample from Fusarium oxysporum Cotton


text: Broad Institute

text: live

text: Generic

text: Mycelium

text: Fusarium oxysporum f. sp. melonis

text: melonis

text: Generic sample from Fusarium oxysporum f. sp. melonis


text: Broad Institute

text: live

text: Generic

text: Fungal hyphae grown on potato dextrose broth

text: Fusarium oxysporum Fov24500

text: Generic sample from Fusarium oxysporum Fov24500


text: BC Cancer Agency GSC

text: live

text: Generic

text: 8-10 week old

characteristic: age

text: H3K9me3 (Abcam ab8898 lot AP248039)

characteristic: chip antibody

text: Mus musculus

text: Pancreatic islets_H3K9me3

text: hand-picked pancreatic islets

characteristic: tissue/cell type


characteristic: External Id

text: BC Cancer Agency GSC

characteristic: INSDC center name

text: live

text: Generic

text: 8-10 week old

text: H3K27me3 (Abcam ab6002 lot 262866)

text: Mus musculus

text: whole liver


text: BC Cancer Agency GSC

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: 8-10 week old

text: H3K9me3 (Abcam ab8898 lot AP248039)

text: Mus musculus

text: whole liver


text: BC Cancer Agency GSC

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: 8-10 week old

text: NeuroD1 (Santa Cruz sc-1084 X lot H1709)

text: Mus musculus

text: Pancreatic islets_NeuroD1

text: hand-picked pancreatic islets


text: BC Cancer Agency GSC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 8-10 week old

text: MafA (Abcam ab17976 lot 950583)

text: Mus musculus

text: Pancreatic islets_MafA

text: hand-picked pancreatic islets


text: BC Cancer Agency GSC

text: live

text: Generic

characteristic: SRA accession

text: 8-10 week old

text: H3K27me3 (Millipore 07-449 lot DAM1641103)

text: Mus musculus

characteristic: organism

text: Pancreatic islets

text: hand-picked pancreatic islets


text: Pennsylvania State University

text: live

text: Generic

text: recapitulated erythroid differentiation after induction by estradiol treatment for 24hr.

characteristic: developmental stage/cell type

text: Mus musculus

text: G1E-ER4+E2 cells


name: Rice leaf transcriptome (RNA-seq method)

text: Boyce Thompson Institute, Cornell Univeristy

text: live

text: Generic

text: Oryza sativa Nipponbare (rice) seeds were used for expression profiling. Husks were first removed from 5 to 10g of seeds using a palm de-husker and extracted seeds were soaked in 75% ethanol for 1 minute at room temperature and then soaked in 3% bleach (sodium hypochlorite) solution at 30°C for 30 minutes. The seeds were then washed 6 times with tap water before adding 30mL of tap water and soaking at 30°C overnight with mild agitation. The following day the tap water was changed every 3-4 hours and again left overnight for incubation at 30°C. On the third day, the tap water was changed twice more and approximately 3 hours after the last change of water, the seeds were planted in flats of water soaked soil consisting of 1 part Unimix (growing media nutrient charge), 5 parts OsmocotePlus (15-9-12 fertilizer), 5 parts lime, 9 parts quartz sand, 9 parts top soil, 26 parts Turface (75% montmorillonite clay), 443 parts peat moss and 933 parts vermiculite. The seeds were planted 3 cm apart with the embryo orientated downward. The plants were grown in a BDW-40 chamber (Conviron, Manitoba, Canada) under an 80:20 mix of metal halide and 100w capselite halogen lamps at a light intensity of 550 µmol/m2/sec. The daytime temperature was 31°C, nighttime temperature was 22°C, and the relative humidity was 50%. The plants were watered everyday as needed and grown for 14 days with a 12-hour day/night cycle. Tissue samples were collected 2 hours after the daylight cycle had begun. The third leaf was excised from the plants with a razor blade, cut into 2 cm sections and immediately placed into liquid nitrogen submerged tubes. Three biological replicates were collected and each replicate contained tissue from approximately 80 rice seedlings grown over a separate 14-day period.

characteristic: description

text: Oryza sativa Japonica Group

text: A robust method for constructing strand-specific RNA-seq multiplex libraries for Illumina platforms and performing data analysis

characteristic: title


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Actinospica robiniae DSM 44927

text: Actinospica robiniae DSM 44927

text: DSM 44927

characteristic: strain

text: Generic sample from Actinospica robiniae DSM 44927


Wild Type

text: Princeton

text: live

text: Generic

text: The strains used are based on the wild-type W3110 E. coli strain (K-12 derived) carrying a gene expressing GFPu2 fused to lacZ and under control of the Lac repressor. Expression of the fluorescent proteins is induced by the addition of IPTG to the media at a concentration of 1 uM.

text: Escherichia coli str. K-12 substr. W3110

text: Wild Type E. coli K12


text: Princeton

text: live

text: Generic

text: This sample was isolated from the cipro side of the microchip after incubating for over 20 hours.

text: Death Galaxy isolate 1 a


text: Princeton

text: live

text: Generic

text: Death Galaxy Isolate 1b


text: Princeton

text: live

text: Generic

text: Death Galaxy isolate 2 a


text: Princeton

text: live

text: Generic

text: Death Galaxy isolate 2 b


text: Princeton

text: live

text: Generic

text: Death Galaxy isolate 3


text: Institute of Oceanology, Chinese Academy of Sciences

text: live

text: Generic

text: Azumapecten farreri

text: BAC library of Chlamys farreri


wallaby sequencing

text: University of Connecitcut

text: live

text: Generic

text: WGS sequencing of the wallaby genome

text: Notamacropus eugenii

text: Wallaby Genome Sequencing


text: Beijing Genome Institute

text: live

text: Generic

text: Macaca fascicularis

text: Generic sample from Macaca fascicularis


text: Beijing Genome Institute

text: live

text: Generic

text: Pan troglodytes

text: Generic sample from Pan troglodytes


text: Beijing Genome Institute

text: live

text: Generic

text: Homo sapiens

text: Generic sample from Homo sapiens


text: Insect Sciences, Zhejiang University

text: live

text: Generic

text: B biotype (MEAM1)

characteristic: biotype

text: harvested from tobacco infected with TYLCCNV

characteristic: growth condition

text: Bemisia tabaci

text: Viruliferous whitefly on tobacco

text: BTV


text: Insect Sciences, Zhejiang University

text: live

text: Generic

text: B biotype (MEAM1)

text: harvested from healthy tobacco

text: Bemisia tabaci

text: Non-viruliferous whitefly on tobacco

text: BT


text: Dr.- Tsang L-SP510, Biology, Concordia University

text: live

text: Generic

characteristic: background/strain

text: vegetative

characteristic: developmental stage

text: wild type

characteristic: genotype

text: Dictyostelium discoideum

text: vegetative cells

text: Dictyostelium wt vegetative


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: vegetative

text: rblA disruptant clone3A6-12

text: Dictyostelium discoideum

text: vegetative cells

text: Dictyostelium rblA disruptant vegetative


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: early culminant

text: wild type

text: Dictyostelium discoideum

text: developing cells

text: Dictyostelium Ax2 early culminant


text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: early culminant

text: rblA disruptant clone3A6-12

text: Dictyostelium discoideum

text: developing cells

text: Dictyostelium rblA disruptant early culminant


text: live

text: Generic

text: vegetative

text: wild type

text: Dictyostelium discoideum

characteristic: organism

text: vegetative cells

text: Dictyostelium cc cold synch t0 rep1

text: cell cycle cold synchronized

characteristic: treatment


text: live

text: Generic

text: vegetative

text: wild type

text: Dictyostelium discoideum

text: vegetative cells

text: Dictyostelium cc cold synch t0 rep2

characteristic: title

text: cell cycle cold synchronized


text: live

text: Generic

text: vegetative

text: wild type

text: Dictyostelium discoideum

text: vegetative cells

text: Dictyostelium cc cold synch t1, rep1

text: cell cycle cold synchronized


text: live

text: Generic

text: vegetative

text: wild type

text: Dictyostelium discoideum

text: vegetative cells

text: Dictyostelium cc cold synch t1, rep2

text: cell cycle cold synchronized


text: live

text: Generic

text: vegetative

text: wild type

text: Dictyostelium discoideum

text: vegetative cells

text: Dictyostelium cc cold synch t1, rep3

text: cell cycle cold synchronized


text: live

text: Generic

text: vegetative

text: wild type

text: Dictyostelium discoideum

text: vegetative cells

text: Dictyostelium cc cold synch t2, rep1

text: cell cycle cold synchronized


text: live

text: Generic

text: vegetative

text: wild type

text: Dictyostelium discoideum

text: vegetative cells

text: Dictyostelium cc cold synch t2, rep2

text: cell cycle cold synchronized


text: live

text: Generic

text: vegetative

text: wild type

text: Dictyostelium discoideum

text: vegetative cells

text: Dictyostelium cc cold synchronized t3

text: cell cycle cold synchronized


text: live

text: Generic

text: vegetative

text: wild type

text: Dictyostelium discoideum

text: vegetative cells

text: Dictyostelium cc cold synchronized t4

text: cell cycle cold synchronized


text: live

text: Generic

text: vegetative

text: wild type

text: Dictyostelium discoideum

text: vegetative cells

text: Dictyostelium cc cold synchronized t5

text: cell cycle cold synchronized


text: live

text: Generic

text: vegetative

text: wild type

text: Dictyostelium discoideum

text: vegetative cells

text: Dictyostelium cc cold synchronized t6

text: cell cycle cold synchronized


text: live

text: Generic

text: vegetative

text: wild type

text: Dictyostelium discoideum

text: vegetative cells

text: Dictyostelium cc cold synchronized t7

text: cell cycle cold synchronized


text: live

text: Generic

text: vegetative

text: wild type

text: Dictyostelium discoideum

text: vegetative cells

text: Dictyostelium cc cold synchronized t8

text: cell cycle cold synchronized


text: live

text: Generic

text: vegetative

text: wild type

text: Dictyostelium discoideum

text: vegetative cells

text: Dictyostelium cc cold synchronized t9

text: cell cycle cold synchronized


text: live

text: Generic

text: vegetative

text: wild type

text: Dictyostelium discoideum

text: vegetative cells

text: Dictyostelium cc cold synchronized t10

text: cell cycle cold synchronized


text: live

text: Generic

text: vegetative

text: wild type

text: Dictyostelium discoideum

text: vegetative cells

text: Dictyostelium cc cold synchronized t11

text: cell cycle cold synchronized


text: live

text: Generic

text: vegetative

text: wild type

text: Dictyostelium discoideum

text: vegetative cells

text: Dictyostelium cc cold synchronized t12

text: cell cycle cold synchronized


text: live

text: Generic

text: vegetative

text: wild type

text: Dictyostelium discoideum

text: vegetative cells

text: Dictyostelium cc cold synchronized t13

text: cell cycle cold synchronized


text: O'Neill, Molecular and Cell Biology, University of Connecticut

text: live

text: Generic

text: 125 days

characteristic: age

text: Notamacropus eugenii

text: pouch young cell

characteristic: sample origin

text: crasiRNA

characteristic: small rna classes

text: pouch young cell


text: live

text: Generic

text: 125 days

text: Notamacropus eugenii

text: pouch young testis

text: crasiRNA

text: pouch young testis


text: live

text: Generic

text: 125 days

text: Notamacropus eugenii

text: pouch young brain

text: miRNA

text: pouch young brain


text: live

text: Generic

text: 125 days

text: Notamacropus eugenii

text: pouch young fibroblasts

text: miRNA

text: pouch young fibroblasts


text: live

text: Generic

text: 125 days

text: Notamacropus eugenii

text: pouch young liver

text: miRNA

text: pouch young liver


text: live

text: Generic

text: 125 days

text: Notamacropus eugenii

text: pouch young ovary

text: miRNA

text: pouch young ovary


text: live

text: Generic

text: 125 days

text: Notamacropus eugenii

text: pouch young testis

text: miRNA

text: pouch young testis


text: live

text: Generic

text: 125 days

text: Notamacropus eugenii

text: pouch young testis

text: piRNA

text: pouch young testis


text: Bioinformatics and Computational Genomics (BioBix), Mathematical modelling, Statistics and Bioinformatics, Ghent University

text: live

text: Generic

text: hydroponic culture for 2 days

characteristic: growth conditions

text: Oryza sativa Japonica Group

text: Rice root tip

text: cv. Nipponbare (GSOR-100)

characteristic: strain

text: root tip

characteristic: tissue


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: hydroponic culture for 6 days

text: Oryza sativa Japonica Group

text: Rice root tip

text: cv. Nipponbare (GSOR-100)

text: root tip


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: hydroponic culture for 2 days

text: Oryza sativa Japonica Group

text: Rice root

text: cv. Nipponbare (GSOR-100)

text: root


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: hydroponic culture for 6 days

text: Oryza sativa Japonica Group

text: Rice root

text: cv. Nipponbare (GSOR-100)

text: root


text: Molecular Genetics and System Biology, Department of Genetics and Biotechnology, Aarhus University, Faculty of Agricultural Sciences

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: cell type

text: female

characteristic: gender

text: Mycoplasma agalactiae PG2 strain

characteristic: infection

text: Capra hircus

text: Primary goat mammary epithelial cell (pgMEC), sample 11, 24 hrs post-infection Goat_11_24h_PI

text: 24 hours post infection

characteristic: time

text: mammary gland


text: live

text: Generic

characteristic: SRA accession

text: female

text: Mycoplasma agalactiae PG2 strain

text: Capra hircus

characteristic: organism

text: Primary goat mammary epithelial cell (pgMEC), sample 6, 3 hrs post-infection Goat_6_3h_PI

text: 3 hours post infection

text: mammary gland

characteristic: title


text: live

text: Generic

text: female

text: Mycoplasma agalactiae PG2 strain

text: Capra hircus

text: Primary goat mammary epithelial cell (pgMEC), sample 10, 24 hrs post-infection Goat_10_24h_PI

text: 24 hours post infection

text: mammary gland


text: live

text: Generic

text: female

text: Mycoplasma agalactiae PG2 strain

text: Capra hircus

text: Primary goat mammary epithelial cell (pgMEC), sample 9, 12 hrs post-infection Goat_9_12h_PI

text: 12 hours post infection

text: mammary gland


text: live

text: Generic

text: female

text: Capra hircus

text: Primary goat mammary epithelial cell (pgMEC), sample 1, control Goat_1_control

text: control

text: mammary gland


text: live

text: Generic

text: female

text: Capra hircus

text: Primary goat mammary epithelial cell (pgMEC), sample 3, control Goat_3_control

text: control

text: mammary gland


text: live

text: Generic

text: female

text: Mycoplasma agalactiae PG2 strain

text: Capra hircus

text: Primary goat mammary epithelial cell (pgMEC), sample 12, 24 hrs post-infection Goat_12_24h_PI

text: 24 hours post infection

text: mammary gland


text: live

text: Generic

text: female

text: Mycoplasma agalactiae PG2 strain

text: Capra hircus

text: Primary goat mammary epithelial cell (pgMEC), sample 8, 12 hrs post-infection Goat_8_12h_PI

text: 12 hours post infection

text: mammary gland


text: live

text: Generic

text: female

text: Mycoplasma agalactiae PG2 strain

text: Capra hircus

text: Primary goat mammary epithelial cell (pgMEC), sample 5, 3 hrs post-infection Goat_5_3h_PI

text: 3 hours post infection

text: mammary gland


text: live

text: Generic

text: female

text: Mycoplasma agalactiae PG2 strain

text: Capra hircus

text: Primary goat mammary epithelial cell (pgMEC), sample 7, 12 hrs post-infection Goat_7_12h_PI

text: 12 hours post infection

text: mammary gland


text: live

text: Generic

text: female

text: Capra hircus

text: Primary goat mammary epithelial cell (pgMEC), sample 2, control Goat_2_control

text: control

text: mammary gland


text: live

text: Generic

text: female

text: Mycoplasma agalactiae PG2 strain

text: Capra hircus

text: Primary goat mammary epithelial cell (pgMEC), sample 4, 3 hrs post-infection Goat_4_3h_PI

text: 3 hours post infection

text: mammary gland


text: BGI-Shenzhen, Shenzhen 518083, China

text: live

text: Generic

text: new born

characteristic: age

text: Heterocephalus glaber

text: liver in pupil naked mole rat

text: liver


text: BGI-Shenzhen, Shenzhen 518083, China

text: live

text: Generic

text: 4 years

text: Heterocephalus glaber

text: liver in 4-year naked mole rat

text: liver

characteristic: tissue


characteristic: External Id

text: BGI-Shenzhen, Shenzhen 518083, China

text: live

text: Generic

text: 20 years

text: Heterocephalus glaber

text: liver in 20-year naked mole rat

text: liver


text: BGI-Shenzhen, Shenzhen 518083, China

characteristic: INSDC center name

text: live

text: Generic

text: new born

text: Heterocephalus glaber

text: kidney in pupil naked mole rat

text: kidney


text: BGI-Shenzhen, Shenzhen 518083, China

characteristic: INSDC first public

text: live

text: Generic

text: 4 years

text: Heterocephalus glaber

text: kidney in 4-year naked mole rat

text: kidney


text: BGI-Shenzhen, Shenzhen 518083, China

characteristic: INSDC last update

text: live

text: Generic

text: 20 years

text: Heterocephalus glaber

text: kidney in 20-year naked mole rat

text: kidney


text: BGI-Shenzhen, Shenzhen 518083, China

characteristic: INSDC secondary accession

text: live

text: Generic

text: new born

text: Heterocephalus glaber

text: brain in pupil naked mole rat

text: brain


text: BGI-Shenzhen, Shenzhen 518083, China

text: live

characteristic: INSDC status

text: Generic

text: 4 years

text: Heterocephalus glaber

text: brain in 4-year naked mole rat

text: brain


text: BGI-Shenzhen, Shenzhen 518083, China

text: live

text: Generic

characteristic: NCBI submission model

text: 20 years

text: Heterocephalus glaber

text: brain in 20-year naked mole rat

text: brain


text: BGI-Shenzhen, Shenzhen 518083, China

text: live

text: Generic

characteristic: NCBI submission package

text: mixed

text: Heterocephalus glaber

text: mixture of 7 tissues of one naked mole rat

text: mixed 7 tissues

text: mixed


text: BGI-Shenzhen, Shenzhen 518083, China

text: live

text: Generic

text: 4 years

text: Heterocephalus glaber

text: liver in 4 years old hypoxia-exposed naked mole rat

text: liver


text: BGI-Shenzhen, Shenzhen 518083, China

text: live

text: Generic

text: 4 years

text: Heterocephalus glaber

text: kidney in 4 years old hypoxia-exposed naked mole rat

text: kidney


text: BGI-Shenzhen, Shenzhen 518083, China

text: live

text: Generic

text: 4 years

text: Heterocephalus glaber

text: brain in 4 years old hypoxia-exposed naked mole rat

text: brain


text: Smith Lab, Molecular and Computational Biology, University of Southern California

text: live

text: Generic

text: Sperm

characteristic: cell type

text: donor 1

characteristic: individual

text: Homo sapiens

text: Sperm

text: human sperm donor 1 bs seq reads


text: live

text: Generic

text: Sperm

text: donor 2

text: Homo sapiens

text: Sperm

text: human sperm donor 2 bs seq reads


text: live

text: Generic

text: Sperm

text: donor 1

text: Pan troglodytes

text: Sperm

text: chimp sperm donor 1 bs seq reads


text: live

text: Generic

text: Sperm

text: donor 2

text: Pan troglodytes

text: Sperm

text: chimp sperm donor 2 bs seq reads


text: Institute of Animal Genetics and Breeding, College of Animal Science and Technology, Sichuan Agricultural University

text: live

text: Generic

text: 210 days

text: Landrace

characteristic: breed

text: adult

characteristic: developmental stage

text: female

characteristic: gender

text: Sus scrofa

text: abdominal subcutaneous adipose

text: adipose: abdominal subcutaneous adipose

text: ASA


text: live

text: Generic

characteristic: SRA accession

text: 210 days

text: Landrace

text: adult

text: female

text: Sus scrofa

characteristic: organism

text: greater omentum

text: adipose: greater omentum

text: GOM


text: live

text: Generic

text: 210 days

characteristic: age

text: Landrace

text: adult

text: female

text: Sus scrofa

text: intermuscular adipose

text: adipose: intermuscular adipose

text: IAD

characteristic: title


characteristic: External Id

text: live

text: Generic

text: 210 days

text: Landrace

text: adult

text: female

text: Sus scrofa

text: inner layer of backfat

text: adipose: inner layer of backfat

characteristic: tissue

text: ILB


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: 210 days

text: Landrace

text: adult

text: female

text: Sus scrofa

text: mesenteric adipose

text: adipose: mesenteric adipose

text: MAD


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: 210 days

text: Landrace

text: adult

text: female

text: Sus scrofa

text: pericardial adipose

text: adipose: pericardial adipose

text: PAD


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: 210 days

text: Landrace

text: adult

text: female

text: Sus scrofa

text: retroperitoneal adipose

text: adipose: retroperitoneal adipose

text: RAD


text: live

text: Generic

characteristic: NCBI submission package

text: 210 days

text: Landrace

text: adult

text: female

text: Sus scrofa

text: upper layer of backfat

text: adipose: upper layer of backfat

text: ULB


text: live

text: Generic

text: 210 days

text: Landrace

text: adult

text: female

text: Sus scrofa

text: longissimus doris muscle

text: skeletal muscle: longissimus doris muscle

text: LDM


text: live

text: Generic

text: 210 days

text: Landrace

text: adult

text: female

text: Sus scrofa

text: psoas major muscle

text: skeletal muscle: psoas major muscle

text: PMM


text: live

text: Generic

text: 210 days

text: Landrace

text: adult

text: female

text: Sus scrofa

text: cardiac muscle

text: cardiac muscle

text: CMU


text: College of Life and Environmental Sciences, University of Exeter

text: live

text: Generic

text: complete

characteristic: medium

text: Pyricularia oryzae

text: mycelium

characteristic: strain

text: mycelium


text: live

text: Generic

text: glucose minimal

text: Pyricularia oryzae

text: mycelium

text: mycelium


text: Whitehead Institute

text: live

text: Generic

text: HMLE

characteristic: background cell line

text: Epithelial

characteristic: cell state

text: expressing pWZL-Twist-ER

characteristic: genotype/variation

text: Homo sapiens

text: HMLE/Twist-ER

text: no

characteristic: tamoxifen treatment

text: HMLE/Twist-ER Pre-induction (Epithelial)


text: Whitehead Institute

text: live

text: Generic

characteristic: SRA accession

text: HMLE

text: Mesenchymal

text: expressing pWZL-Twist-ER

text: Homo sapiens

characteristic: organism

text: HMLE/Twist-ER

text: yes

text: HMLE/Twist-ER induced (Mesenchymal)


characteristic: External Id

text: ETH Zürich

text: live

text: Generic

text: 6 months

characteristic: age

text: antibody to histone H4K5 acetylation (Millipore, cat. 07-327)

characteristic: chip antibody

text: Mus musculus

text: hippocampus, context-only control, H4K5ac_ChIP

text: hippocampus

characteristic: title


text: ETH Zürich

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: 6 months

text: Mus musculus

text: hippocampus, context-only control, IC

text: hippocampus

characteristic: tissue


text: ETH Zürich

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 6 months

text: Mus musculus

text: hippocampus, context-only control, IgG

text: hippocampus


text: ETH Zürich

text: live

text: Generic

text: 6 months

text: Mus musculus

text: hippocampus, fear-conditioned, H4K5ac

characteristic: strain

text: hippocampus


text: ETH Zürich

text: live

text: Generic

text: 6 months

text: Mus musculus

text: hippocampus, fear-conditioned, IC

text: hippocampus


text: ETH Zürich

text: live

text: Generic

text: 6 months

text: Mus musculus

text: hippocampus, fear-conditioned, IgG

text: hippocampus


text: Z. Josh huang, Neuroscience, Cold Spring Harbor Laboratory

text: live

text: Generic

text: C57BL/6 & black swiss

characteristic: background strain

text: anti-Ago2 (2E12-1C9, Abnova)

characteristic: ip antibody

characteristic: mouse age

characteristic: number of pooled tissues

text: Mus musculus

text: Cerebellum

text: Cerebellum


characteristic: External Id

text: live

text: Generic

characteristic: SRA accession

text: C57BL/6 & black swiss

text: anti-myc (sc-40, Santa Cruz Biotechnology)

text: Mus musculus

characteristic: organism

text: Purkinje

text: Cerebellum


text: live

text: Generic

text: C57BL/6 & BALB/c

text: Mus musculus

text: Neocortex

characteristic: title


characteristic: INSDC center name

text: live

text: Generic

text: C57BL/6 & 129

text: Mus musculus

text: Neocortex


characteristic: INSDC first public

text: live

text: Generic

text: C57BL/6 & BALB/c

text: anti-Ago2 (2E12-1C9, Abnova)

text: Mus musculus

text: Neocortex

text: Neocortex


characteristic: INSDC last update

text: live

text: Generic

text: C57BL/6 & 129

text: Mus musculus

text: PV

text: Neocortex


text: live

text: Generic

text: C57BL/6 & 129

text: Mus musculus

text: SST

text: Neocortex

characteristic: tissue


text: UCSD

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: chip antibody

text: Mus musculus

text: Frontal cortex

text: 129X1/SvJ x Cast/EiJ

text: F1i_ChIP_Seq_H3K4me3 (GAII)

text: Millipore, 04-745

characteristic: vendor


text: UCSD

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Mus musculus

text: Frontal cortex

text: Cast/EiJ x 129X1/SvJ

text: F1r_ChIP_Seq_H3K4me3 (GAII)

text: Millipore, 04-745


text: UCSD

text: live

text: Generic

text: Mus musculus

text: Frontal cortex

text: 129X1/SvJ x Cast/EiJ

characteristic: strain

text: F1i_ChIP_Seq_H3K27ac (GAII)

text: Active Motif, AM39133


text: UCSD

text: live

text: Generic

text: Mus musculus

text: Frontal cortex

text: Cast/EiJ x 129X1/SvJ

text: F1r_ChIP_Seq_H3K27ac (GAII)

text: Active Motif, AM39133


text: UCSD

text: live

text: Generic

text: Mus musculus

text: Frontal cortex

text: 129X1/SvJ x Cast/EiJ

text: frontal cortex


text: UCSD

text: live

text: Generic

text: Mus musculus

text: Frontal cortex

text: Cast/EiJ x 129X1/SvJ

text: frontal cortex


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Wolfiporia cocos MD-104 SS10

characteristic: description

text: Wolfiporia cocos MD-104 SS10

text: MD-104 SS10

text: Generic sample from Wolfiporia cocos MD-104 SS10


text: National Center for Genome Resources

text: live

text: Generic

text: Rattus norvegicus

text: Generic sample from Rattus norvegicus


text: USDA-ARS

text: live

text: Generic

text: Subtractive hybridization was performed with the PCR-Select cDNA Subtraction Kit (Clontech), according to the manufacturer's protocol. Tester tissue consisted of the anterior kidney of fish 12 hours post injection of attenuated Aeromonas hydrophila. Driver tissue was the anterior kidney of tryptic soy broth injected control fish.

text: 6 months

characteristic: dev-stage

text: anterior kidney

characteristic: organ

text: Ictalurus punctatus

text: mixed

characteristic: sex

text: Industry pool

text: Channel catfish anterior kidney subtractive library 12h post vaccination of attenuated Aeromonas hydrophila

text: pGEM T easy (promega)

characteristic: vector


characteristic: External Id

text: Institut des Hautes Etudes Scientifiques

text: live

text: Generic

text: Primary Peripheral Blood Mononuclear Cells (PBMCs)

characteristic: cell type

text: 16 different AGMs SIV infected or not were used for this library. PBMCs were isolated from blood by Ficoll-Hypaque (Pharmacia Biotech) density gradient centrifugation. For Concanavalin A (ConA) activation: 4 × 10^6 of isolated PBMCs were plated in RPMI-1640 with 5% fetal calf serum (FCS) with 10µg/ml of ConA for 2, 6, 24, 36 or 72h. For lipopolysaccharides (LPS) activation: 4 × 10^6 of isolated PBMCs were plated in RPMI-1640 with 5% fetal calf serum (FCS) with 10µg/ml of LPS [E.Coli 0111:B4 Sigma (L2630)] for 2, 6, 24, 36 or 72h. The mixed lymphocyte reactions (MLR) were done by mixing 4 × 10^6 of isolated PBMCs with 4 × 10^5 PBMC from another animal in RPMI-1640 with 5% fetal calf serum (FCS) for 2, 6, 24, 36 or 72h. Unstimulated cells were also kept for further RNA extraction. Total RNA was extracted from 4 x 10^6 cells by using the RNeasy Mini extraction Kit (Qiagen, Courtaboeuf, France) following the manufacturer's instructions.

text: adult

text: Chlorocebus sabaeus

characteristic: organism

text: male and female

text: blood

characteristic: tissue-type

text: Chlorocebus sabaeus PBMCs EST Library

characteristic: title


text: Central Institute of Medicinal and Aromatic Plants

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: The cDNA library was constructed from polyA+ RNA using the Clontech PCR-Select cDNA subtraction kit (Clontech). A suppression subtractive hybridization was performed between developing fruit (tester) and young leaf (driver) polyA+ RNA. The primary PCR was carried out for 28 cycles and it was followed by a secondary PCR of 12 cycles using Advantage polymerase mixture (Clontech). Subsequently, the cDNAs were cloned randomly in pGEM-T Easy vector.

text: immature developing fruit

text: Azadirachta indica

text: Eco RI

text: Eco RI

text: hermaphrodite

text: fruit

text: Azadirachta indica subtracted cDNA library of fruit tissue

text: plasmid

text: pGEM-T Easy


text: National Institute of Nutrition and Seafood Research

text: live

characteristic: INSDC status

text: Generic

text: Gadus morhua

text: Gadus morhua Gmlib01


text: University of Boras

text: live

text: Generic

characteristic: NCBI submission model

text: Supression subtractive hybridisation for differential expression between yeast-like and filamentous growth forms

text: Mucor indicus

text: CCUG 22424

text: Mucor indicus strain CCUG 22424 SSH library

text: Plasmid

text: pGEM-T Easy Vector


leishmania-major-wt

text: Université Laval

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Leishmania major

text: Leishmania major wild-type


text: Université Laval

text: live

text: Generic

text: Leishmania major

text: Leishmania major MF80.3


text: Université Laval

text: live

text: Generic

text: Leishmania major

text: Leishmania major MF80.5


Australian QD

text: Northern Arizona University - The Microbial Genetics & Genomics Center

text: live

text: Generic

text: Australian QD (RSA 425) is a phase II phenotype from an acute infection, isolated from human blood in Australia in 1939 with at least 178 egg passages.

characteristic: description

text: Coxiella burnetii

text: Coxiella burnetii - Australian QD (RSA 425)


McMaster

text: live

text: Generic

text: McMaster (Q172) was originally isolated from a human placenta.

text: Coxiella burnetii

text: Coxiella burnetii - McMaster (Q172)


text: Broad Institute

text: live

text: Generic

text: Escherichia coli PBA1

characteristic: sample name

characteristic: strain

text: Generic sample from Escherichia coli PBA1


text: Broad Institute

text: live

text: Generic

text: Mycobacterium tuberculosis mc(2)6020-D

text: Generic sample from Mycobacterium tuberculosis mc(2)6020-D


text: Broad Institute

text: live

text: Generic

text: Mycobacterium tuberculosis HT1117

text: Generic sample from Mycobacterium tuberculosis HT1117


text: Broad Institute

text: live

text: Generic

text: Mycobacterium tuberculosis HT1157

text: Generic sample from Mycobacterium tuberculosis HT1157


text: Broad Institute

text: live

text: Generic

text: Chinchilla lanigera

text: Generic sample from Chinchilla lanigera


Nepalese V. cholerae WGS project

text: Translational Genomics Research Institute-North

text: live

text: Generic

text: Vibrio cholerae

text: Nepalese V. cholerae WGS project; VC-1


Nepalese V. cholerae WGS project: VC-2

text: live

text: Generic

text: Vibrio cholerae

text: Nepalese V. cholerae WGS project: VC-2


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Punctularia strigosozonata HHB-11173 SS5

text: HHB-11173 SS5


Nepalese V. cholerae WGS project: VC-3

text: live

text: Generic

text: Pseudomonas chlororaphis subsp. chlororaphis

text: Nepalese V. cholerae WGS project: VC-3


Nepalese V. cholerae WGS project: VC-4

text: live

text: Generic

text: Vibrio cholerae

text: Nepalese V. cholerae WGS project: VC-4


Nepalese V. cholerae WGS project: VC-5

text: live

text: Generic

text: Vibrio cholerae

text: Nepalese V. cholerae WGS project: VC-5


Nepalese V. cholerae WGS project: VC-6

text: live

text: Generic

text: Vibrio cholerae

text: Nepalese V. cholerae WGS project: VC-6


Nepalese V. cholerae WGS project: VC-7

text: live

text: Generic

text: Vibrio cholerae

text: Nepalese V. cholerae WGS project: VC-7


Nepalese V. cholerae WGS project: VC-8

text: live

text: Generic

text: Vibrio cholerae

text: Nepalese V. cholerae WGS project: VC-8


Nepalese V. cholerae WGS project: VC-9

text: live

text: Generic

text: Vibrio cholerae

text: Nepalese V. cholerae WGS project: VC-9


Nepalese V. cholerae WGS project: VC-10

text: live

text: Generic

text: Vibrio cholerae

text: Nepalese V. cholerae WGS project: VC-10


Nepalese V. cholerae WGS project: VC-11

text: live

text: Generic

text: Vibrio cholerae

text: Nepalese V. cholerae WGS project: VC-11


Nepalese V. cholerae WGS project: VC-12

text: live

text: Generic

text: Vibrio cholerae

text: Nepalese V. cholerae WGS project: VC-12


Nepalese V. cholerae WGS project: VC-13

text: live

text: Generic

text: Vibrio cholerae

text: Nepalese V. cholerae WGS project: VC-13


Nepalese V. cholerae WGS project: VC-14

text: live

text: Generic

text: Vibrio cholerae

text: Nepalese V. cholerae WGS project: VC-14


Nepalese V. cholerae WGS project: VC-15

text: live

text: Generic

text: Vibrio cholerae

text: Nepalese V. cholerae WGS project: VC-15


Nepalese V. cholerae WGS project: VC-16

text: live

text: Generic

text: Vibrio cholerae

text: Nepalese V. cholerae WGS project: VC-16


Nepalese V. cholerae WGS project: VC-17

text: live

text: Generic

text: Vibrio cholerae

text: Nepalese V. cholerae WGS project: VC-17


Nepalese V. cholerae WGS project: VC-18

text: live

text: Generic

text: Vibrio cholerae

text: Nepalese V. cholerae WGS project: VC-18


Nepalese V. cholerae WGS project: VC-19

text: live

text: Generic

text: Vibrio cholerae

text: Nepalese V. cholerae WGS project: VC-19


Nepalese V. cholerae WGS project: VC-20

text: live

text: Generic

text: Vibrio cholerae

text: Nepalese V. cholerae WGS project: VC-20


Nepalese V. cholerae WGS project: VC-21

text: live

text: Generic

text: Vibrio cholerae

text: Nepalese V. cholerae WGS project: VC-21


Nepalese V. cholerae WGS project: VC-22

text: live

text: Generic

text: Vibrio cholerae

text: Nepalese V. cholerae WGS project: VC-22


Nepalese V. cholerae WGS project: VC-25

text: live

text: Generic

text: Vibrio cholerae

text: Nepalese V. cholerae WGS project: VC-25


Nepalese V. cholerae WGS project: VC-26

text: live

text: Generic

text: Vibrio cholerae

text: Nepalese V. cholerae WGS project: VC-26


text: Kaessmann, Center For Integrative Genomics, University of Lausanne

text: live

text: Generic

text: ~1 year, adult

characteristic: age

text: Rneasy Lipid

characteristic: extraction

text: female

characteristic: gender

text: Gallus gallus

characteristic: rin

text: Brain

text: Facility of Linkoping University, Sweden

characteristic: tissue source

text: gga br F 1


characteristic: External Id

text: live

text: Generic

text: ~1 year, adult

text: Standard

text: male

text: Gallus gallus

characteristic: organism

text: Brain

text: gga br M 1

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: ~1 year, adult

text: Standard

text: female

text: Gallus gallus

text: Cerebellum

text: gga cb F 1


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: ~1 year, adult

text: Rneasy Lipid

text: male

text: Gallus gallus

text: Cerebellum

text: gga cb M 1


text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: ~1 year, adult

text: Standard

text: female

text: Gallus gallus

text: Heart

text: gga ht F 1


text: live

text: Generic

text: ~1 year, adult

text: Standard

text: male

text: Gallus gallus

text: Heart

text: gga ht M 1


text: live

text: Generic

text: ~1 year, adult

text: Standard

text: female

text: Gallus gallus

text: Kidney

text: gga kd F 1


text: live

text: Generic

text: ~1 year, adult

text: Standard

text: male

text: Gallus gallus

text: Kidney

text: gga kd M 1


text: live

text: Generic

text: ~1 year, adult

text: Standard

text: female

text: Gallus gallus

text: Liver

text: gga lv F 1


text: live

text: Generic

text: ~1 year, adult

text: Standard

text: male

text: Gallus gallus

text: Liver

text: gga lv M 1


text: live

text: Generic

text: ~1 year, adult

text: Standard

text: male

text: Gallus gallus

text: Testis

text: gga ts M 1


text: live

text: Generic

text: ~1 year, adult

text: Standard

text: male

text: Gallus gallus

text: Testis

text: gga ts M 2


text: live

text: Generic

text: adult

text: Standard

text: female

text: Ornithorhynchus anatinus

text: Brain

text: Captured in New South Wales, Australia (provided by Adelaide University)

text: oan br F 1


text: live

text: Generic

text: adult

text: Standard

text: male

text: Ornithorhynchus anatinus

text: Brain

text: oan br M 1


text: live

text: Generic

text: adult

text: Standard

text: female

text: Ornithorhynchus anatinus

text: Cerebellum

text: oan cb F 1


text: live

text: Generic

text: adult

text: Standard

text: male

text: Ornithorhynchus anatinus

text: Cerebellum

text: oan cb M 1


text: live

text: Generic

text: adult

text: Standard

text: female

text: Ornithorhynchus anatinus

text: Heart

text: oan ht F 1


text: live

text: Generic

text: adult

text: Standard

text: male

text: Ornithorhynchus anatinus

text: Heart

text: oan ht M 1


text: live

text: Generic

text: adult

text: Standard

text: female

text: Ornithorhynchus anatinus

text: Kidney

text: oan kd F 1


text: live

text: Generic

text: adult

text: Standard

text: male

text: Ornithorhynchus anatinus

text: Kidney

text: oan kd M 1


text: live

text: Generic

text: adult

text: Standard

text: female

text: Ornithorhynchus anatinus

text: Liver

text: oan lv F 1


text: live

text: Generic

text: adult

text: Standard

text: male

text: Ornithorhynchus anatinus

text: Liver

text: oan lv M 1


text: live

text: Generic

text: adult

text: Standard

text: male

text: Ornithorhynchus anatinus

text: Testis

text: oan ts M 1


text: live

text: Generic

text: adult

text: Standard

text: male

text: Ornithorhynchus anatinus

text: Testis

text: oan ts M 2


text: live

text: Generic

text: 20 months

text: RNeasy

text: female

text: Monodelphis domestica

text: Brain

text: Opossum colonies from the Museum of Natural History, Berlin, Germany

text: mdo br F 1


text: live

text: Generic

text: 6 months

text: miRNeasy

text: male

text: Monodelphis domestica

text: Brain

text: mdo br M 1


text: live

text: Generic

text: 20 months

text: RNeasy

text: female

text: Monodelphis domestica

text: Cerebellum

text: mdo cb F 1


text: live

text: Generic

text: 6 months

text: RNeasy

text: male

text: Monodelphis domestica

text: Cerebellum

text: mdo cb M 1


text: live

text: Generic

text: 25 months

text: Standard

text: female

text: Monodelphis domestica

text: Heart

text: mdo ht F 1


text: live

text: Generic

text: 6 months

text: Standard

text: male

text: Monodelphis domestica

text: Heart

text: mdo ht M 1


text: live

text: Generic

text: 25 months

text: Standard

text: female

text: Monodelphis domestica

text: Kidney

text: mdo kd F 1


text: live

text: Generic

text: 6 months

text: Standard

text: male

text: Monodelphis domestica

text: Kidney

text: mdo kd M 1


text: live

text: Generic

text: 25 months

text: Standard

text: female

text: Monodelphis domestica

text: Liver

text: mdo lv F 1


text: live

text: Generic

text: 6 months

text: Standard

text: male

text: Monodelphis domestica

text: Liver

text: mdo lv M 1


text: live

text: Generic

text: 6 months

text: Standard

text: male

text: Monodelphis domestica

text: Testis

text: mdo ts M 1


text: live

text: Generic

text: 4 months

text: RNeasy

text: male

text: Monodelphis domestica

text: Testis

text: mdo ts M 2


text: live

text: Generic

text: adult

text: Standard

text: female

text: Mus musculus

text: Brain

text: In house, C57BL7/6 colonies

text: mmu br F 1


text: live

text: Generic

text: adult

text: Standard

text: male

text: Mus musculus

text: Brain

text: In house, C57BL7/6 colonies

text: mmu br M 1


text: live

text: Generic

text: adult

text: Standard

text: male

text: Mus musculus

text: Brain

text: Captured in Catalonia, Spain

text: mmu br M 2


text: live

text: Generic

text: adult

text: Rneasy Lipid

text: female

text: Mus musculus

text: Cerebellum

text: In house, C57BL7/6 colonies

text: mmu cb F 1


text: live

text: Generic

text: adult

text: Standard

text: male

text: Mus musculus

text: Cerebellum

text: In house, C57BL7/6 colonies

text: mmu cb M 1


text: live

text: Generic

text: adult

text: Standard

text: male

text: Mus musculus

text: Cerebellum

text: Captured in Catalonia, Spain

text: mmu cb M 2


text: live

text: Generic

text: adult

text: Standard

text: female

text: Mus musculus

text: Heart

text: In house, C57BL7/6 colonies

text: mmu ht F 1


text: live

text: Generic

text: adult

text: Standard

text: male

text: Mus musculus

text: Heart

text: In house, C57BL7/6 colonies

text: mmu ht M 1


text: live

text: Generic

text: adult

text: Standard

text: male

text: Mus musculus

text: Heart

text: Captured in Catalonia, Spain

text: mmu ht M 2


text: live

text: Generic

text: adult

text: Standard

text: female

text: Mus musculus

text: Kidney

text: In house, C57BL7/6 colonies

text: mmu kd F 1


text: live

text: Generic

text: adult

text: Standard

text: male

text: Mus musculus

text: Kidney

text: In house, C57BL7/6 colonies

text: mmu kd M 1


text: live

text: Generic

text: adult

text: Standard

text: male

text: Mus musculus

text: Kidney

text: Captured in Catalonia, Spain

text: mmu kd M 2


text: live

text: Generic

text: adult

text: Standard

text: female

text: Mus musculus

text: Liver

text: In house, C57BL7/6 colonies

text: mmu lv F 1


text: live

text: Generic

text: adult

text: Standard

text: male

text: Mus musculus

text: Liver

text: In house, C57BL7/6 colonies

text: mmu lv M 1


text: live

text: Generic

text: adult

text: Standard

text: male

text: Mus musculus

text: Liver

text: Captured in Catalonia, Spain

text: mmu lv M 2


text: live

text: Generic

text: adult

text: Standard

text: male

text: Mus musculus

text: Testis

text: In house, C57BL7/6 colonies

text: mmu ts M 1


text: live

text: Generic

text: adult

text: Standard

text: male

text: Mus musculus

text: Testis

text: Captured in Catalonia, Spain

text: mmu ts M 2


text: live

text: Generic

text: 8 years

text: Standard

text: female

text: Macaca mulatta

text: Brain

text: Macaque facility in Souzhou, China

text: mml br F 1


text: live

text: Generic

text: 8 years

text: Standard

text: male

text: Macaca mulatta

text: Brain

text: Macaque facility in Souzhou, China

text: mml br M 1


text: live

text: Generic

text: 7 years

text: RNeasy

text: male

text: Macaca mulatta

text: Brain, prefrontal cortex

text: Deutsches Primatenzentrum, Germany

text: mml br M 2


text: live

text: Generic

text: 8 years

text: Standard

text: female

text: Macaca mulatta

text: Cerebellum

text: Macaque facility in Souzhou, China

text: mml cb F 1


text: live

text: Generic

text: 8 years

text: Standard

text: male

text: Macaca mulatta

text: Cerebellum

text: Macaque facility in Souzhou, China

text: mml cb M 1


text: live

text: Generic

text: 8 years

text: Standard

text: female

text: Macaca mulatta

text: Heart

text: Macaque facility in Souzhou, China

text: mml ht F 1


text: live

text: Generic

text: 8 years

text: Standard

text: male

text: Macaca mulatta

text: Heart

text: Macaque facility in Souzhou, China

text: mml ht M 1


text: live

text: Generic

text: 8 years

text: Standard

text: female

text: Macaca mulatta

text: Kidney

text: Macaque facility in Souzhou, China

text: mml kd F 1


text: live

text: Generic

text: 8 years

text: Standard

text: male

text: Macaca mulatta

text: Kidney

text: Macaque facility in Souzhou, China

text: mml kd M 1


text: live

text: Generic

text: 8 years

text: Standard

text: female

text: Macaca mulatta

text: Liver

text: Macaque facility in Souzhou, China

text: mml lv F 1


text: live

text: Generic

text: 8 years

text: Standard

text: male

text: Macaca mulatta

text: Liver

text: Macaque facility in Souzhou, China

text: mml lv M 1


text: live

text: Generic

text: 8 years

text: Standard

text: male

text: Macaca mulatta

text: Testis

text: Macaque facility in Souzhou, China

text: mml ts M 1


text: live

text: Generic

text: 9 years

text: RNeasy

text: male

text: Macaca mulatta

text: Testis

text: Deutsches Primatenzentrum, Germany

text: mml ts M 2


text: live

text: Generic

text: 56 years

text: RNeasy

text: female

text: Pongo pygmaeus

text: Brain, prefrontal cortex

text: Zoo Leipzig, Germany

text: ppy br F 1


text: live

text: Generic

text: 16 years

text: RNeasy

text: male

text: Pongo pygmaeus

text: Brain, prefrontal cortex

text: National Veterinary Institute, Uppsala, Sweden

text: ppy br M 1


text: live

text: Generic

text: 56 years

text: RNeasy

text: female

text: Pongo pygmaeus

text: Cerebellum

text: Zoo Leipzig, Germany

text: ppy cb F 1


text: live

text: Generic

text: 56 years

text: RNeasy

text: female

text: Pongo pygmaeus

text: Heart

text: Zoo Leipzig, Germany

text: ppy ht F 1


text: live

text: Generic

text: 21 years

text: RNeasy

text: male

text: Pongo pygmaeus

text: Heart

text: Yerkes Regional Primate Center, USA

text: ppy ht M 1


text: live

text: Generic

text: 56 years

text: RNeasy

text: female

text: Pongo pygmaeus

text: Kidney

text: Zoo Leipzig, Germany

text: ppy kd F 1


text: live

text: Generic

text: 21 years

text: RNeasy

text: male

text: Pongo pygmaeus

text: Kidney

text: Yerkes Regional Primate Center, USA

text: ppy kd M 1


text: live

text: Generic

text: 56 years

text: RNeasy

text: female

text: Pongo pygmaeus

text: Liver

text: Zoo Leipzig, Germany

text: ppy lv F 1


text: live

text: Generic

text: 21 years

text: RNeasy

text: male

text: Pongo pygmaeus

text: Liver

text: Yerkes Regional Primate Center, USA

text: ppy lv M 1


text: live

text: Generic

text: 50 years

text: RNeasy

text: female

text: Gorilla gorilla

text: Brain, prefrontal cortex

text: Zoo Berlin, Germany

text: ggo br F 1


text: live

text: Generic

text: 51 years

text: RNeasy

text: Female (note: this sample was originally provided as a male sample to us and therefore labeled this way in the Brawand et al. paper and original GEO submission; however, detailed data analyses carried out in the meantime clearly show that this sample stems from a female individual)

text: Gorilla gorilla

text: Brain, prefrontal cortex

text: Zoo Frankfurt, Germany

text: ggo br M 1


text: live

text: Generic

text: 50 years

text: RNeasy

text: female

text: Gorilla gorilla

text: Cerebellum

text: Zoo Berlin, Germany

text: ggo cb F 1


text: live

text: Generic

text: 51 years

text: RNeasy

text: male

text: Gorilla gorilla

text: Cerebellum

text: Zoo Frankfurt, Germany

text: ggo cb M 1


text: live

text: Generic

text: 50 years

text: RNeasy

text: female

text: Gorilla gorilla

text: Heart

text: Zoo Berlin, Germany

text: ggo ht F 1


text: live

text: Generic

text: 51 years

text: RNeasy

text: male

text: Gorilla gorilla

text: Heart

text: Zoo Frankfurt, Germany

text: ggo ht M 1


text: live

text: Generic

text: 50 years

text: RNeasy

text: female

text: Gorilla gorilla

text: Kidney

text: Zoo Berlin, Germany

text: ggo kd F 1


text: live

text: Generic

text: 51 years

text: RNeasy

text: male

text: Gorilla gorilla

text: Kidney

text: Zoo Frankfurt, Germany

text: ggo kd M 1


text: live

text: Generic

text: 50 years

text: RNeasy

text: female

text: Gorilla gorilla

text: Liver

text: Zoo Berlin, Germany

text: ggo lv F 1


text: live

text: Generic

text: 51 years

text: RNeasy

text: male

text: Gorilla gorilla

text: Liver

text: Zoo Frankfurt, Germany

text: ggo lv M 1


text: live

text: Generic

text: 51 years

text: RNeasy

text: male

text: Gorilla gorilla

text: Testis

text: Zoo Frankfurt, Germany

text: ggo ts M 1


text: live

text: Generic

text: 44 years

text: RNeasy

text: female

text: Pan troglodytes

text: Brain, prefrontal cortex

text: Yerkes Regional Primate Center, USA

text: ptr br F 1


text: live

text: Generic

text: 12.3 years

text: RNeasy

text: male

text: Pan troglodytes

text: Brain, prefrontal cortex

text: Biomedical Primate Research Center, Netherlands (BPRC)

text: ptr br M 1


text: live

text: Generic

text: 35 years

text: RNeasy

text: male

text: Pan troglodytes

text: Brain, prefrontal cortex

text: Zoo Zurich, Switzerland

text: ptr br M 2


text: live

text: Generic

text: 12.1 years

text: RNeasy

text: male

text: Pan troglodytes

text: Brain, prefrontal cortex

text: ptr br M 3


text: live

text: Generic

text: 6.7 years

text: RNeasy

text: male

text: Pan troglodytes

text: Brain, prefrontal cortex

text: ptr br M 4


text: live

text: Generic

text: 12 years

text: RNeasy

text: male

text: Pan troglodytes

text: Brain, prefrontal cortex

text: ptr br M 5


text: live

text: Generic

text: 44 years

text: RNeasy

text: female

text: Pan troglodytes

text: Cerebellum

text: Yerkes Regional Primate Center, USA

text: ptr cb F 1


text: live

text: Generic

text: 12 years

text: RNeasy

text: male

text: Pan troglodytes

text: Cerebellum

text: ptr cb M 1


text: live

text: Generic

text: 44 years

text: RNeasy

text: female

text: Pan troglodytes

text: Heart

text: Yerkes Regional Primate Center, USA

text: ptr ht F 1


text: live

text: Generic

text: 12 years

text: RNeasy

text: male

text: Pan troglodytes

text: Heart

text: ptr ht M 1


text: live

text: Generic

text: 44 years

text: RNeasy

text: female

text: Pan troglodytes

text: Kidney

text: Yerkes Regional Primate Center, USA

text: ptr kd F 1


text: live

text: Generic

text: 12 years

text: RNeasy

text: male

text: Pan troglodytes

text: Kidney

text: ptr kd M 1


text: live

text: Generic

text: 44 years

text: RNeasy

text: female

text: Pan troglodytes

text: Liver

text: Yerkes Regional Primate Center, USA

text: ptr lv F 1


text: live

text: Generic

text: 12 years

text: RNeasy

text: male

text: Pan troglodytes

text: Liver

text: ptr lv M 1


text: live

text: Generic

text: 12 years

text: RNeasy

text: male

text: Pan troglodytes

text: Testis

text: ptr ts M 1


text: live

text: Generic

text: female

text: Pan paniscus

text: Brain, prefrontal cortex

text: Lola ya Bonobo Sanctuary, Democratic Republic of Congo

text: ppa br F 1


text: live

text: Generic

text: female

text: Pan paniscus

text: Brain, prefrontal cortex

text: ppa br F 2


text: live

text: Generic

text: male

text: Pan paniscus

text: Brain, prefrontal cortex

text: ppa br M 1


text: live

text: Generic

text: female

text: Pan paniscus

text: Cerebellum

text: ppa cb F 1


text: live

text: Generic

text: male

text: Pan paniscus

text: Cerebellum

text: ppa cb M 1


text: live

text: Generic

text: female

text: Pan paniscus

text: Heart

text: ppa ht F 1


text: live

text: Generic

text: male

text: Pan paniscus

text: Heart

text: ppa ht M 1


text: live

text: Generic

text: female

text: Pan paniscus

text: Kidney

text: ppa kd F 1


text: live

text: Generic

text: male

text: Pan paniscus

text: Kidney

text: ppa kd M 1


text: live

text: Generic

text: female

text: Pan paniscus

text: Liver

text: ppa lv F 1


text: live

text: Generic

text: male

text: Pan paniscus

text: Liver

text: ppa lv M 1


text: live

text: Generic

text: male

text: Pan paniscus

text: Testis

text: ppa ts M 1


text: live

text: Generic

text: male

text: Homo sapiens

text: Brain, frontal cortex

text: Commercial / AMS biotechnology

text: hsa br F 1


text: live

text: Generic

text: male

text: Homo sapiens

text: Brain, frontal cortex

text: Commercial / Ambion

text: hsa br M 3


text: live

text: Generic

text: male

text: Homo sapiens

text: Brain, prefrontal cortex

text: Netherland Brain Bank, Netherlands

text: hsa br M 1


text: live

text: Generic

text: male

text: Homo sapiens

text: Brain, prefrontal cortex

text: Netherland Brain Bank, Netherlands

text: hsa br M 2


text: live

text: Generic

text: male

text: Homo sapiens

text: Brain, prefrontal cortex

text: Netherland Brain Bank, Netherlands

text: hsa br M 4


text: live

text: Generic

text: male

text: Homo sapiens

text: Brain, temporal lobe

text: Commercial / AMS biotechnology

text: hsa br M 5


text: live

text: Generic

text: female

text: Homo sapiens

text: Cerebellum

text: Commercial / AMS biotechnology

text: hsa cb F 1


text: live

text: Generic

text: male

text: Homo sapiens

text: Cerebellum

text: Commercial / Ambion

text: hsa cb M 1


text: live

text: Generic

text: female

text: Homo sapiens

text: Heart

text: Commercial / AMS biotechnology

text: hsa ht F 1


text: live

text: Generic

text: male

text: Homo sapiens

text: Heart

text: Commercial / AMS biotechnology

text: hsa ht M 1


text: live

text: Generic

text: male

text: Homo sapiens

text: Heart

text: National Disease Research Interchange, USA (NDRI)

text: hsa ht M 2


text: live

text: Generic

text: female

text: Homo sapiens

text: Kidney

text: Commercial / AMS biotechnology

text: hsa kd F 1


text: live

text: Generic

text: male

text: Homo sapiens

text: Kidney

text: Commercial / AMS biotechnology

text: hsa kd M 1


text: live

text: Generic

text: male

text: Homo sapiens

text: Kidney

text: hsa kd M 2


text: live

text: Generic

text: male

text: Homo sapiens

text: Liver

text: Commercial / AMS biotechnology

text: hsa lv M 1


text: live

text: Generic

text: male

text: Homo sapiens

text: Liver

text: hsa lv M 2


text: live

text: Generic

text: male

text: Homo sapiens

text: Testis

text: Commercial / AMS biotechnology

text: hsa ts M 1


text: live

text: Generic

text: male

text: Homo sapiens

text: Testis

text: hsa ts M 2


Rat pineal gland, E21, ZT7

text: NICHD

text: live

text: Generic

text: Rat pineal gland, Embryonic day 21 (E21), ZT7

characteristic: description

text: Rattus norvegicus

text: Rat pineal gland, E21, ZT7


Rat pineal gland, E21, ZT19

text: NICHD

text: live

text: Generic

text: Rat pineal gland, Embryonic day 21 (E21), ZT19

text: Rattus norvegicus

text: Rat pineal gland, E21, ZT19


Rat pineal gland, P5, ZT7

text: NICHD

text: live

text: Generic

text: Rat pineal gland, Post-natal day 5 (P5), ZT7

text: Rattus norvegicus

text: Rat pineal gland, P5, ZT7


Rat pineal gland, P5, ZT19

text: NICHD

text: live

text: Generic

text: Rat pineal gland, Post-natal day 5 (P5), ZT19

text: Rattus norvegicus

text: Rat pineal gland, P5, ZT19


Rat pineal gland, P20, ZT7

text: NICHD

text: live

text: Generic

text: Rat pineal gland, Post-natal day 20 (P20), ZT7

text: Rattus norvegicus

text: Rat pineal gland, P20, ZT7


text: Buell Lab, Dept. of Plant Biology, Michigan State University

text: live

text: Generic

text: Cannabis sativa

text: Cannabis sativa entire root


Rat pineal gland, P20, ZT19

text: NICHD

text: live

text: Generic

text: Rat pineal gland, Post-natal day 20 (P20), ZT19

text: Rattus norvegicus

text: Rat pineal gland, P20, ZT19


Rat pineal gland, P40, ZT7

text: NICHD

text: live

text: Generic

text: Rat pineal gland, Post-natal day 40 (P40), ZT7

text: Rattus norvegicus

text: Rat pineal gland, P40, ZT7


Rat pineal gland, P40, ZT19

text: NICHD

text: live

text: Generic

text: Rat pineal gland, Post-natal day 40 (P40), ZT19

text: Rattus norvegicus

text: Rat pineal gland, P40, ZT19


text: live

text: Generic

text: Cannabis sativa

text: Cannabis sativa stem- petioles (entire)


text: live

text: Generic

text: Cannabis sativa

text: Cannabis sativa flower- buds


text: live

text: Generic

text: Cannabis sativa

text: Cannabis sativa flower-buds


text: live

text: Generic

text: Cannabis sativa

text: Cannabis sativa mature flower (fully expanded)


text: live

text: Generic

text: Cannabis sativa

text: Cannabis sativa young leaf (<25% expanded)


text: live

text: Generic

text: Cannabis sativa

text: Cannabis sativa mature leaf (fully expanded)


text: live

text: Generic

text: Cannabis sativa

text: Cannabis sativa primary stem (entire)


text: live

text: Generic

text: Cannabis sativa

text: Cannabis sativa flower buds


text: Endocarditis, Pneumonia

characteristic: Diseases

characteristic: GOLD Stamp ID

text: Gram-

characteristic: Gram Staining

characteristic: Greengenes ID

text: NCBI

text: live

text: Generic

text: Nonsporulating

characteristic: Sporulation

text: free living

characteristic: biotic relationship

text: Rod-shaped

characteristic: cell shape

text: Canada

characteristic: country

text: Keywords: GSC:MIGS:2.1

text: Fresh water, Soil

characteristic: environment

characteristic: investigation type

text: Crude-oil pipeline from Alberta, Canada

characteristic: isolation site

text: crude-oil pipeline

characteristic: isolation-source

text: Motile

characteristic: motility

text: Shewanella putrefaciens 200

text: Pathogen

characteristic: phenotypes

text: Shewanella putrefaciens 200

characteristic: project name

text: anaerobe

characteristic: sequencing depth

characteristic: strain

text: Mesophile

characteristic: temperature range

text: Shewanella putrefaciens 200, complete genome.

text: heterotroph


characteristic: External Id

text: Texas A&M University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: The mid 4th instar cowpea bruchid larvae were exposed to normoxia condition (20% oxygen and 0% carbon dioxide) or hypoxia/hypercapnia condition (3% oxygen and 17% carbon dioxide) for 24 h, repectively. The mRNA was extracted from whole insects and used to construct 3'-anchored cDNA libraries. The control and hypoxia/hypercapnia-treated cDNA library was subjected for 454 pyrosequencing.

characteristic: description

text: Callosobruchus maculatus

characteristic: organism

text: cowpea bruchid exposed to hypoxia/hypercapnia

characteristic: title


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Cercospora zeae-maydis SCOH1-5

text: Cercospora zeae-maydis SCOH1-5

text: Generic sample from Cercospora zeae-maydis SCOH1-5


Testes

text: University of Washington

text: live

text: Generic

text: Clupea pallasii

text: Testes transcriptome


text: INRA - UMR BIOGECO

text: live

text: Generic

text: 1 year old cuttings

characteristic: dev-stage

text: Quercus petraea

text: root apex

characteristic: tissue-type

text: Quercus petraea root apex 1 year old cuttings


text: INRA - UMR BIOGECO

text: live

text: Generic

text: 1 year old cuttings

text: Quercus robur

text: root apex

text: Quercus robur root apex 1 year old cuttings


text: INRA - UMR BIOGECO

text: live

text: Generic

text: 1 year old cuttings

text: root apex

text: Quercus petraea/Quercus robur mixed clone library root apex 1 year old cuttings


text: National Institute for Environmental Studies

text: live

text: Generic

text: Botryococcus braunii

text: NIES full-length enriched BOT70 cDNA library


text: RIKEN BioResource Center

text: live

text: Generic

characteristic: cultivar

text: 2 weeks old

text: Brassica rapa subsp. pekinensis

text: pekinensis

characteristic: sub-species

text: aerial part

text: Chinese cabbage Full-length cDNA library


text: Max Planck Institute for Chemical Ecology

text: live

text: Generic

text: Helicoverpa armigera salivary gland transcriptome analysis; normalized cDNA library

text: gland

characteristic: organ

text: Helicoverpa armigera

text: Mixed

characteristic: sex

text: salivary gland

text: Har-GLN norm

text: Plasmid

text: pDNR-Lib

characteristic: vector


characteristic: External Id

text: Institute of Himalayan Bioresource Technology

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Root

text: Caragana jubata

text: Root

text: Substractive cDNA library of Caragana jubata root

text: Plasmid

text: pGEMT-Easy vector (Promega)


text: National Institute of Malaria Research

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: SSH cDNA library was prepared from sugar fed and starved mosquito salivary gland. Positive Recombinant clones were PCR amplified and sequenced using M13F sequencing primers.

text: Adult

text: Salivary Gland

text: Anopheles stephensi

text: female

text: pGEM-T


text: Freshwater Fisheries Research Center, Chinese Academy of Fishery Sciences

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Macrobrachium nipponense

text: male

text: testis

text: Oriental river prawn testis cDNA library


text: Bose Institute

text: live

text: Generic

text: Spleen

text: Mus musculus

text: Mus musculus genomic DNA for IFN gamma


text: UPenn

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: Nugen (non polyA)

characteristic: amplification

text: Canton S

characteristic: genetic background

text: wild-type

characteristic: genotype

text: 100 bp

characteristic: mean insert size

text: Drosophila melanogaster

text: paired (2x100)

characteristic: paired or single-end

text: CS ZT0 non-polyA

characteristic: time point

text: brain

characteristic: tissue

text: CS ZT0 rep1 non-polyA


text: UPenn

text: live

text: Generic

text: Nugen (non polyA)

text: Canton S

text: wild-type

text: 100 bp

text: Drosophila melanogaster

characteristic: organism

text: paired (2x100)

text: CS ZT6 non-polyA

text: brain

text: CS ZT6 rep1 non-polyA

characteristic: title


characteristic: External Id

text: UPenn

characteristic: INSDC center name

text: live

text: Generic

text: Nugen (non polyA)

text: Canton S

text: wild-type

text: 100 bp

text: Drosophila melanogaster

text: paired (2x100)

text: CS ZT12 non-polyA

text: brain

text: CS ZT12 rep1 non-polyA


text: UPenn

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Nugen (non polyA)

text: Canton S

text: wild-type

text: 100 bp

text: Drosophila melanogaster

text: paired (2x100)

text: CS ZT18 non-polyA

text: brain

text: CS ZT18 rep1 non-polyA


text: UPenn

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Nugen (non polyA)

text: Canton S

text: wild-type

text: 100 bp

text: Drosophila melanogaster

text: paired (2x100)

text: CS ZT0 non-polyA

text: brain

text: CS ZT0 rep2 non-polyA


text: UPenn

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

text: Nugen (non polyA)

text: Canton S

text: wild-type

text: 100 bp

text: Drosophila melanogaster

text: paired (2x100)

text: CS ZT6 non-polyA

text: brain

text: CS ZT6 rep2 non-polyA


text: UPenn

text: live

text: Generic

characteristic: SRA accession

text: Nugen (non polyA)

characteristic: amplification

text: Canton S

text: wild-type

text: 100 bp

text: Drosophila melanogaster

text: paired (2x100)

text: CS ZT12 non-polyA

text: brain

text: CS ZT12 rep2 non-polyA


text: UPenn

text: live

text: Generic

text: Nugen (non polyA)

text: Canton S

characteristic: genetic background

text: wild-type

characteristic: genotype

text: 100 bp

text: Drosophila melanogaster

text: paired (2x100)

text: CS ZT18 non-polyA

text: brain

text: CS ZT18 rep2 non-polyA


text: UPenn

text: live

text: Generic

text: Nugen (non polyA)

text: Canton S

text: 100 bp

characteristic: mean insert size

text: Drosophila melanogaster

text: paired (2x100)

characteristic: paired or single-end

text: Per ZT0 non-polyA

text: brain

text: Per ZT0 rep1 non-polyA


text: UPenn

text: live

text: Generic

text: Nugen (non polyA)

text: Canton S

text: 100 bp

text: Drosophila melanogaster

text: paired (2x100)

text: Per ZT6 non-polyA

characteristic: time point

text: brain

characteristic: tissue

text: Per ZT6 rep1 non-polyA


text: UPenn

text: live

text: Generic

text: Nugen (non polyA)

text: Canton S

text: 100 bp

text: Drosophila melanogaster

characteristic: organism

text: paired (2x100)

text: Per ZT12 non-polyA

text: brain

text: Per ZT12 rep1 non-polyA

characteristic: title


characteristic: External Id

text: UPenn

characteristic: INSDC center name

text: live

text: Generic

text: Nugen (non polyA)

text: Canton S

text: 100 bp

text: Drosophila melanogaster

text: paired (2x100)

text: Per ZT18 non-polyA

text: brain

text: Per ZT18 rep1 non-polyA


text: UPenn

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Nugen (non polyA)

text: Canton S

text: 100 bp

text: Drosophila melanogaster

text: paired (2x100)

text: Per ZT0 non-polyA

text: brain

text: Per ZT0 rep2 non-polyA


text: UPenn

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Nugen (non polyA)

text: Canton S

text: 100 bp

text: Drosophila melanogaster

text: paired (2x100)

text: Per ZT6 non-polyA

text: brain

text: Per ZT6 rep2 non-polyA


text: UPenn

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

text: Nugen (non polyA)

text: Canton S

text: 100 bp

text: Drosophila melanogaster

text: paired (2x100)

text: Per ZT12 non-polyA

text: brain

text: Per ZT12 rep2 non-polyA


text: UPenn

text: live

text: Generic

characteristic: SRA accession

text: Nugen (non polyA)

characteristic: amplification

text: Canton S

text: 100 bp

text: Drosophila melanogaster

text: paired (2x100)

text: Per ZT18 non-polyA

text: brain

text: Per ZT18 rep2 non-polyA


text: UPenn

text: live

text: Generic

text: MDS (polyA)

text: Canton S

characteristic: genetic background

text: wild-type

characteristic: genotype

text: 75 bp

text: Drosophila melanogaster

text: single (1x75)

text: CS ZT0 polyA

text: brain

text: CS ZT0 rep1 polyA


text: UPenn

text: live

text: Generic

text: MDS (polyA)

text: Canton S

text: wild-type

text: 75 bp

characteristic: mean insert size

text: Drosophila melanogaster

text: single (1x75)

characteristic: paired or single-end

text: CS ZT12 polyA

text: brain

text: CS ZT12 rep1 polyA


text: UPenn

text: live

text: Generic

text: MDS (polyA)

text: Canton S

text: wild-type

text: 75 bp

text: Drosophila melanogaster

text: single (1x75)

text: CS ZT0 polyA

characteristic: time point

text: brain

characteristic: tissue

text: CS ZT0 rep2 polyA


text: UPenn

text: live

text: Generic

text: MDS (polyA)

text: Canton S

text: wild-type

text: 75 bp

text: Drosophila melanogaster

characteristic: organism

text: single (1x75)

text: CS ZT12 polyA

text: brain

text: CS ZT12 rep2 polyA

characteristic: title


characteristic: External Id

text: UPenn

characteristic: INSDC center name

text: live

text: Generic

text: MDS (polyA)

text: Canton S

text: yw, per0

text: 75 bp

text: Drosophila melanogaster

text: single (1x75)

text: Per ZT0 polyA

text: brain

text: Per ZT0 rep1 polyA


text: UPenn

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: MDS (polyA)

text: Canton S

text: yw, per0

text: 75 bp

text: Drosophila melanogaster

text: single (1x75)

text: Per ZT12 polyA

text: brain

text: Per ZT12 rep1 polyA


text: UPenn

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: MDS (polyA)

text: Canton S

text: yw, per0

text: 75 bp

text: Drosophila melanogaster

text: single (1x75)

text: Per ZT0 polyA

text: brain

text: Per ZT0 rep2 polyA


text: UPenn

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

text: MDS (polyA)

text: Canton S

text: yw, per0

text: 75 bp

text: Drosophila melanogaster

text: single (1x75)

text: Per ZT12 polyA

text: brain

text: Per ZT12 rep2 polyA


text: Gerstein Lab, Molecular Biophysics & Biochemistry, Yale University

text: live

text: Generic

characteristic: SRA accession

characteristic: cell type

text: lymphoblastoid cell-line derived from NA12878

characteristic: description

text: Homo sapiens

text: poly(A) selected RNA

characteristic: rna type

text: Lymphoblastoid cell-line

text: RNA-Seq


text: Broad Institute

text: live

text: Generic

characteristic: collection date

text: mycelium

characteristic: isolation source

text: Fusarium oxysporum f. sp. lycopersici 5397

characteristic: sample name

characteristic: strain

text: Generic sample from Fusarium oxysporum f.sp. lycopersici 5397


text: Broad Institute

text: live

text: Generic

text: mycelium

text: Fusarium oxysporum f. sp. lycopersici WCS852 / E241

characteristic: organism

text: WCS852 / E241

text: Generic sample from Fusarium oxysporum f.sp. lycopersici WCS852 / E241

characteristic: title


characteristic: External Id

text: Broad Institute

characteristic: INSDC center name

text: live

text: Generic

text: Fusarium oxysporum f. sp. lycopersici DF0-38

text: Generic sample from Fusarium oxysporum f.sp. lycopersici DF0-38


text: Broad Institute

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: mycelium

text: Fusarium oxysporum f. sp. lycopersici LSU-3

text: Generic sample from Fusarium oxysporum f.sp. lycopersici LSU-3


text: Broad Institute

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Fusarium oxysporum f. sp. lycopersici DF0-40

text: Generic sample from Fusarium oxysporum f.sp. lycopersici DF0-40


text: Broad Institute

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

text: mycelium

text: Fusarium oxysporum f. sp. lycopersici IPO1530 / B1

text: IPO1530 / B1

text: Generic sample from Fusarium oxysporum f.sp. lycopersici IPO1530 / B1


text: Broad Institute

text: live

text: Generic

characteristic: SRA accession

text: mycelium

text: Fusarium oxysporum f. sp. lycopersici CA92/95

text: Generic sample from Fusarium oxysporum f.sp. lycopersici CA92/95


text: Broad Institute

text: live

text: Generic

text: Fusarium oxysporum MN-14

text: Generic sample from Fusarium oxysporum MN-14


text: Broad Institute

text: live

text: Generic

text: Fusarium oxysporum f. sp. lycopersici DF0-62

text: Generic sample from Fusarium oxysporum f.sp. lycopersici DF0-62


text: Broad Institute

text: live

text: Generic

text: Fusarium oxysporum f. sp. lycopersici DF0-23

text: Generic sample from Fusarium oxysporum f.sp. lycopersici DF0-23


text: Broad Institute

text: live

text: Generic

text: Fusarium oxysporum f. sp. lycopersici DF0-41

text: Generic sample from Fusarium oxysporum f.sp. lycopersici DF0-41


text: Broad Institute

text: live

text: Generic

text: mycelium

text: Fusarium oxysporum f. sp. lycopersici LSU-7

text: Generic sample from Fusarium oxysporum f.sp. lycopersici LSU-7


text: Broad Institute

text: live

text: Generic

text: mycelium

text: Fusarium oxysporum f. sp. lycopersici 14844(M1943)

text: Generic sample from Fusarium oxysporum f.sp. lycopersici 14844(M1943)


text: Gerstein Lab, Molecular Biophysics & Biochemistry, Yale University

text: live

text: Generic

characteristic: antibody

characteristic: cell type

text: lymphoblastoid cell-line derived from NA12878

characteristic: description

text: Homo sapiens

text: Lymphoblastoid cell-line

text: Pol II ChIP-Seq


text: live

text: Generic

text: Jun-D

text: Homo sapiens

text: Lymphoblastoid cell-line

text: JunD ChIP-Seq


text: live

text: Generic

text: c-Fos

text: Homo sapiens

text: Lymphoblastoid cell-line

text: cFos ChIP-Seq


text: live

text: Generic

text: Max

text: Homo sapiens

text: Lymphoblastoid cell-line

text: Max ChIP-Seq


text: live

text: Generic

text: c-Myc

text: Homo sapiens

text: Lymphoblastoid cell-line

text: cMyc ChIP-Seq


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Pachysolen tannophilus NRRL Y-2460

text: Pachysolen tannophilus NRRL Y-2460

text: NRRL Y-2460

text: Generic sample from Pachysolen tannophilus NRRL Y-2460


text: Chen, Microbiology, The Forsyth Institute

text: live

text: Generic

text: at 48 hours

characteristic: harvest time

text: BAPHK

characteristic: medium

text: Porphyromonas gingivalis W83

text: P. gingivalis cells


text: live

text: Generic

text: mid-log phase

text: TSB

text: Porphyromonas gingivalis W83

text: P. gingivalis cells

characteristic: strain


text: live

text: Generic

text: mid-log phase

text: MIN

text: Porphyromonas gingivalis W83

characteristic: organism

text: P. gingivalis cells


text: Cornelis Murre, Division of Biological Sciences, UCSD

text: live

text: Generic

text: thymocyte

characteristic: chip antibody

text: Santa Cruz Biotechnology

characteristic: chip antibody vendor

text: C57BL/6 (Rag2-/-)

characteristic: genetic background

characteristic: genotype

text: Mus musculus

text: Rag2-/- thymocytes, E2A ChIP

text: E2A, Day 0

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: thymocyte

text: Santa Cruz Biotechnology

text: C57BL/6 (Rag2-/-)

text: Mus musculus

text: Rag2-/- thymocytes, anti-CD3e Ab injection, E2A ChIP

text: E2A, Day 2

text: anti-CD3e Ab injection

characteristic: treatment

text: 2 days

characteristic: treatment duration


characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: thymocyte

characteristic: cell type

text: Abcam

text: C57BL/6 (Rag2-/-)

text: Mus musculus

text: Rag2-/- thymocytes, H3K4me1 ChIP

text: H3K4me1, Day 0


text: live

text: Generic

text: thymocyte

characteristic: chip antibody

text: Abcam

text: C57BL/6 (Rag2-/-)

text: Mus musculus

characteristic: organism

text: Rag2-/- thymocytes, anti-CD3e Ab injection, H3K4me1 ChIP

text: H3K4me1, Day 2

text: anti-CD3e Ab injection

text: 2 days


text: live

text: Generic

text: thymocyte

text: C57BL/6 (Rag2-/-)

characteristic: genetic background

text: Mus musculus

text: Rag2-/- thymocytes, input

text: Input


text: kunming institute of zoology.CAS

text: live

text: Generic

characteristic: cell line

text: stem cells

text: Macaca mulatta

text: parthenogenetic activated blastocysts

characteristic: origin

characteristic: passage

text: embryonic stem cells


characteristic: External Id

text: IBP

characteristic: INSDC center name

text: live

text: Generic

text: Full plants

text: 11 days seedling

characteristic: developmental stage

text: Hwayong

characteristic: genotype/variation

text: Oryza sativa Japonica Group

text: HY(Hwayong)

text: HY H3K4me3_ChIPSeq

characteristic: title

text: Millipore, DAM1731494

characteristic: vendor


text: IBP

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Full plants

text: 11 days seedling

text: Oryza sativa Japonica Group

text: chd1 H3K4me3_ChIPSeq

text: Millipore, DAM1731494


text: IBP

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Full plants

characteristic: cell type

text: 11 days seedling

text: Hwayong

text: Oryza sativa Japonica Group

text: HY(Hwayong)

text: HY H3K27me3_ChIPSeq

text: Millipore, DAM166204


text: IBP

text: live

text: Generic

text: Full plants

characteristic: chip antibody

text: 11 days seedling

text: Oryza sativa Japonica Group

characteristic: organism

text: chd1 H3K27me3_ChIPSeq

text: Millipore, DAM166204


text: Whitehead Institute for Biomedical Research

text: live

text: Generic

text: 6-7 days after pollination

characteristic: age

text: Col-0 female X Ler male

characteristic: genetic background

text: Arabidopsis thaliana

text: embryo 6-7 days after pollination

text: embryo

characteristic: tissue

text: Col x Ler embryo RNA-seq


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: 6-7 days after pollination

text: Col-0 female X Ler male

text: Arabidopsis thaliana

text: endosperm 6-7 days after pollination

text: endosperm

text: Col x Ler endosperm RNA-seq


text: live

text: Generic

text: 6-7 days after pollination

text: Ler female X Col-0 male

text: Arabidopsis thaliana

text: embryo 6-7 days after pollination

text: embryo

text: Ler x Col embryo RNA-seq

characteristic: title


text: live

text: Generic

text: 6-7 days after pollination

text: Ler female X Col-0 male

text: Arabidopsis thaliana

text: endosperm 6-7 days after pollination

text: endosperm

text: Ler x Col endosperm RNA-seq


A. niger RNA

text: Concordia University

text: live

text: Generic

text: Aspergillus niger ATCC 1015

text: Aspergilllus niger ATCC1015 RNA


text: live

text: Generic

text: Catenaria anguillulae PL171

characteristic: description

text: Catenaria anguillulae PL171

characteristic: strain

text: Generic sample from Catenaria anguillulae PL171


text: Oil Crops Research Institute, Chinese Academy of Agricultural Sciences

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: mixed

text: 30-50 day post flowering

characteristic: dev-stage

text: Arachis hypogaea

text: hermaphrodite

characteristic: sex

text: seed

characteristic: tissue-type

text: Developing seed cDNA library of peanut (Arachis hypogaea)

text: pDNR-LIB

characteristic: vector


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: mixed

characteristic: cell type

text: fully expanded leaf

text: Arachis hypogaea

text: hermaphrodite

text: leaf

text: Normal leaf cDNA library of peanut (Arachis hypogaea)

text: pDNR-LIB


text: live

text: Generic

text: mixed

text: root from plantlet

text: Arachis hypogaea

characteristic: organism

text: hermaphrodite

text: root

text: Root cDNA library of peanut (Arachis hypogaea)

text: pDNR-LIB


text: live

text: Generic

text: mixed

text: fully expanded leaf 1-3 day post Ralstonia solanacearum challenging

text: Arachis hypogaea

text: hermaphrodite

text: leaf

text: Ralstonia solanacearum challenged leaf cDNA library of peanut (Arachis hypogaea)

text: pDNR-LIB


text: live

text: Generic

text: mixed

text: root 1-3 day post Ralstonia solanacearum challenging

text: Arachis hypogaea

text: hermaphrodite

text: root

text: Ralstonia solanacearum challenged root cDNA library of peanut (Arachis hypogaea)

text: pDNR-LIB


name: Citrobacter rodentium infection time-series

text: BWH Department of Pathology, Harvard Medical School

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: Five-week old male C57BL/6 mice were gavaged with approximately 5X107 CFU of C. rodentium. Ileum, cecum and distal colon (devoid of fecal pellets) from infected mice and uninfected controls were harvested at days 3, 7, 10, 14, 21 and 28 post-inoculation for 16S rRNA gene sequencing. Fragments of the 16S rRNA gene (~330 bp), spanning the V1 and V2 hypervariable regions, were PCR amplified from each tissue sample using sample-specific barcodes adapted to universal 16S primers 27F (AGAGTTTGATCTGGCTCAG)?? and 519R (GWATTACCGCGGCKGCTG)?? Pooled samples were submitted for sequencing on three plates, using the Genome Sequencer FLX with the GS-LR70 kit (Roche Applied Sciences, Indiannapolis, IN) at Duke University’s IGSP Sequencing Core Facility (Durham, NC).

text: Mus musculus


loligo opalescens

characteristic: External Id

text: University of Florida

characteristic: INSDC center name

text: live

text: Generic

text: Loligo

text: loligo opalescens


text: University of Arizona

text: live

text: Generic

text: metagenomes

text: Metagenome of a viral-tagged MBARI coastal sample

characteristic: title


Viral Tagged Coastal

text: University of Arizona

text: live

text: Generic

text: metagenomes

text: Viral Tagged Metagenome


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Botryobasidium botryosum FD-172 SS1

characteristic: description

text: Botryobasidium botryosum FD-172 SS1

text: FD-172 SS1

characteristic: strain

text: Generic sample from Botryobasidium botryosum FD-172 SS1


Equine Fecal Metagenome 01

text: Virginia Tech

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Fecal microflora (16S rDNA genes) of an obese horse fed an 18% NSC hay for 28 days

text: gut metagenome

text: Equine Fecal Microbiome 01


text: University of Nebraska

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis thaliana, ecotype Col-0


text: University of Nebraska

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis thaliana, ecotype C24


At-Ler

text: University of Nebraska

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis thaliana, ecotype Ler


text: University of Nebraska

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis thaliana, ecotype Col-0, early generation of msh1 mutant


text: University of Nebraska

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis thaliana, ecotype Col-0, msh1 mutant advanced generation


text: IAS-CSIC

text: live

text: Generic

text: Chinese spring

characteristic: cultivar

text: Intact mitotic 4AL chromosome arms were isolated by flow cytometric sorting from Triticum aestivum cv. 'Chinese spring'. The purity in the sorted fractions was determined by fluorescence in situ hybridization (FISH). The DNA of sorted chromosomes was purified and amplified by Multiple Displacement Amplification (MDA).

text: Triticum aestivum

text: Triticum aestivum Intact mitotic 4AL chromosome arms


Rhesus Testis cDNA 454

text: Whitehead Institute

text: live

text: Generic

text: Macaca mulatta

text: Rhesus Testis cDNA 454


text: Beijing Genome Institute

text: live

text: Generic

text: To overcome the key issue of heterozygosity and allow us to generate a high-quality draft potato genome sequence, we used a unique homozygous form of potato called a doubled monoploid, derived using classical tissue culture techniques.

text: Solanum tuberosum


text: Institute for Genome Sciences University of MD School of Medicine

text: live

text: USA

text: Generic

text: Streptococcus

characteristic: genus

characteristic: isolate

text: Streptococcus pneumoniae EU-NP04

text: Streptococcus pneumoniae EU-NP04

type: AMR curated data - CABBAGE

value: clindamycin

value: susceptible

value: Streptococcus pneumoniae

value: levofloxacin

value: meropenem

value: resistant

value: amoxicillin

value: intermediate

value: erythromycin

value: tetracycline

value: trimethoprim-sulfamethoxazole

value: cefuroxime

value: cefotaxime

value: penicillin


text: live

characteristic: INSDC status

text: USA

text: Generic

text: Streptococcus

text: Homo sapiens

characteristic: host

text: blood

text: blood

text: Streptococcus pneumoniae GA40410

text: Streptococcus pneumoniae GA40410

value: quinupristin-dalfopristin

value: linezolid

value: chloramphenicol

value: vancomycin

value: ciprofloxacin

value: rifampin

value: sparfloxacin


text: live

text: USA

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Streptococcus

text: Homo sapiens

text: blood

text: blood

text: Streptococcus pneumoniae GA43264

text: Streptococcus pneumoniae GA43264

value: susceptible

value: Streptococcus pneumoniae

value: meropenem

value: ceftriaxone

value: clindamycin

value: telithromycin

value: levofloxacin


text: live

text: USA

text: Generic

text: Streptococcus

text: Homo sapiens

text: blood

text: blood

text: Streptococcus pneumoniae GA44128

characteristic: organism

text: Streptococcus pneumoniae GA44128

value: resistant

value: amoxicillin

value: tetracycline

value: trimethoprim-sulfamethoxazole

value: cefuroxime

value: erythromycin


characteristic: INSDC secondary accession

text: live

text: USA

text: Generic

text: Streptococcus

text: Streptococcus pneumoniae EU-NP03

text: Streptococcus pneumoniae EU-NP03

value: intermediate

value: penicillin

value: cefotaxime


text: live

text: USA

text: Generic

characteristic: SRA accession

text: Streptococcus

text: Homo sapiens

text: blood

text: blood

text: Streptococcus pneumoniae GA04175

text: Streptococcus pneumoniae GA04175

value: cefaclor

value: ofloxacin

value: quinupristin-dalfopristin

value: chloramphenicol

value: rifampin

value: vancomycin


characteristic: External Id

text: live

text: USA

text: Generic

text: Streptococcus

text: Homo sapiens

text: blood

text: blood

text: Streptococcus pneumoniae GA05248

text: Streptococcus pneumoniae GA05248

value: susceptible

value: Streptococcus pneumoniae

value: clindamycin

value: meropenem


Equine Fecal Microbiome 02

text: Virginia Tech

characteristic: INSDC center name

text: live

text: Generic

text: Fecal microflora (16S rDNA genes) of an obese horse fed an 12% NSC hay for 28 days

text: gut metagenome

text: Equine Fecal Microbiome 02


Equine Fecal Microbiome 03

text: Virginia Tech

text: live

text: Generic

text: Fecal microflora (16S rDNA genes) of an non-obese horse fed an 12% NSC hay for 28 days

text: gut metagenome

text: Equine Fecal Microbiome 03

characteristic: title


Equine Fecal Microbiome 04

text: Virginia Tech

text: live

text: Generic

text: Fecal microflora (16S rDNA genes) of an non-obese horse fed an 18% NSC hay for 28 days

characteristic: description

text: gut metagenome

text: Equine Fecal Microbiome 04


text: live

text: USA

text: Generic

text: Streptococcus

text: Homo sapiens

text: blood

text: blood

text: Streptococcus pneumoniae GA47522

characteristic: strain

text: Streptococcus pneumoniae GA47522

value: ceftriaxone

value: ciprofloxacin

value: resistant

value: tetracycline

value: amoxicillin

value: telithromycin

value: linezolid

value: levofloxacin


characteristic: INSDC first public

text: live

text: USA

text: Generic

text: Streptococcus

text: Homo sapiens

text: blood

text: blood

text: Streptococcus pneumoniae GA47760

text: Streptococcus pneumoniae GA47760

value: cefotaxime

value: erythromycin

value: trimethoprim-sulfamethoxazole

value: cefuroxime

value: penicillin


characteristic: INSDC last update

text: live

text: USA

text: Generic

text: Streptococcus

text: Homo sapiens

text: blood

text: blood

text: Streptococcus pneumoniae GA49542

text: Streptococcus pneumoniae GA49542

value: intermediate

value: chloramphenicol

value: susceptible

value: rifampin

value: vancomycin

value: quinupristin-dalfopristin