characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Newbler v. 2.0.00.20

text: terrestrial biome [ENVO:00000446]

text: not determined

text: Methanobrevibacter smithii strain DSM 2375

characteristic: description

text: Level 3: Improved-High-Quality Draft47x;20

text: not determined

text: not determined

text: not determined

text: biological product [ENVO:02000043]

characteristic: material

text: not determined

text: not determined

characteristic: nucleic acid extraction

text: not determined

text: Methanobrevibacter smithii DSM 2375

characteristic: organism

text: Methanobrevibacter smithii F1, DSM 2374

characteristic: project name

text: Reference Genome

text: not determined

text: DSM 2374

text: Homo sapiens

text: DSM 2375

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Methanobrevibacter smithii DSM 2375


status: PUBLIC

text: Washington University, Genome Sequencing Center

text: live

text: Generic

text: Mitsuokella multacida NCTC 10934

text: Mitsuokella multacida DSM 20544

text: DSM 20544

tag: attribute

text: Generic sample from Mitsuokella multacida DSM 20544

characteristic: title


text: live

text: MIGS.ba

text: Newbler v. 2.0.00.20

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

characteristic: culture-collection

text: Neisseria cinerea strain ATCC 14685

characteristic: estimated size

text: human-associated habitat [ENVO:00009003]

characteristic: feature

text: Level 3: Improved-High-Quality Draft42.6x;47

characteristic: finishing strategy (depth of coverage)

text: not determined

characteristic: geo loc name

characteristic: host taxid

text: not determined

text: not determined

characteristic: lat lon

text: biological product [ENVO:02000043]

text: Nasopharynx

characteristic: misc_param: HMP body site

text: airways

characteristic: misc_param: HMP supersite

text: not determined

text: not determined

text: Neisseria cinerea ATCC 14685

text: Neisseria cinerea ATCC 14685

text: Reference Genome

text: not determined

characteristic: sequencing method

characteristic: sop

text: ATCC 14685

text: Homo sapiens

characteristic: specific host

text: ATCC 14685

text: MIGS Cultured Bacterial/Archaeal sample from Neisseria cinerea ATCC 14685


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: not determined

text: terrestrial biome [ENVO:00000446]

text: not determined

text: Neisseria elongata subsp. glycolytica strain ATCC 29315

characteristic: description

text: Level 2: High-Quality Draft33x;268

text: not determined

text: not determined

text: not determined

text: biological product [ENVO:02000043]

characteristic: material

text: Nasopharynx

text: airways

text: not determined

characteristic: nucleic acid extraction

text: not determined

characteristic: organism

text: Neisseria elongata glycolytica ATCC 29315

characteristic: project name

text: Reference Genome

text: not determined

text: ATCC 29315, NCTC 11050

text: Homo sapiens

text: ATCC 29315

characteristic: strain

text: glycolytica

characteristic: sub species

text: MIGS Cultured Bacterial/Archaeal sample from Neisseria elongata subsp. glycolytica ATCC 29315


text: live

text: MIGS.ba

text: Newbler v. 2.0.00.20

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

text: Neisseria flavescens strain NRL30031/H210

characteristic: estimated size

characteristic: feature

text: Level 2: High-Quality Draft31.4x;117

characteristic: finishing strategy (depth of coverage)

text: not determined

characteristic: geo loc name

characteristic: host taxid

text: not determined

text: not determined

characteristic: lat lon

text: biological product [ENVO:02000043]

text: not determined

characteristic: misc_param: HMP body site

text: airways

characteristic: misc_param: HMP supersite

text: not determined

text: not determined

text: Neisseria flavescens NRL30031/H210

text: Neisseria flavescens NRL30031/H210

text: Reference Genome

text: not determined

characteristic: sequencing method

characteristic: sop

text: not determined

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Neisseria flavescens NRL30031/H210

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Newbler v. 2.0.00.20

text: terrestrial biome [ENVO:00000446]

text: not determined

characteristic: culture-collection

text: Neisseria lactamica strain ATCC 23970

characteristic: description

text: Level 3: Improved-High-Quality Draft28.4x;101

text: not determined

text: not determined

text: not determined

text: biological product [ENVO:02000043]

characteristic: material

text: Nasopharynx

text: airways

text: not determined

characteristic: nucleic acid extraction

text: not determined

text: Neisseria lactamica ATCC 23970

characteristic: organism

text: Neisseria lactamica ATCC 23970

characteristic: project name

text: Reference Genome

text: not determined

text: ATCC 23970, NCDC A7515, NCTC 10617

text: Homo sapiens

text: ATCC 23970

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Neisseria lactamica ATCC 23970


text: live

text: MIGS.ba

text: Newbler v. 2.0.00.20

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

text: Neisseria mucosa strain ATCC 25996

characteristic: estimated size

characteristic: feature

text: Level 3: Improved-High-Quality Draft30.2x;212

characteristic: finishing strategy (depth of coverage)

text: not determined

characteristic: geo loc name

characteristic: host taxid

text: not determined

text: not determined

characteristic: lat lon

text: biological product [ENVO:02000043]

text: Nasopharynx

characteristic: misc_param: HMP body site

text: airways

characteristic: misc_param: HMP supersite

text: not determined

text: not determined

text: Neisseria mucosa ATCC 25996

text: Neisseria mucosa M26, ATCC 25996

text: Reference Genome

text: not determined

characteristic: sequencing method

characteristic: sop

text: ATCC 25996

text: Homo sapiens

characteristic: specific host

text: ATCC 25996

text: MIGS Cultured Bacterial/Archaeal sample from Neisseria mucosa ATCC 25996

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: not determined

text: terrestrial biome [ENVO:00000446]

text: not determined

characteristic: culture-collection

text: Neisseria sicca NRL 30016

characteristic: description

text: Level 3: Improved-High-Quality Draft18.5x;61

text: not determined

text: not determined

text: not determined

text: biological product [ENVO:02000043]

characteristic: material

text: Nasopharynx

text: airways

text: not determined

characteristic: nucleic acid extraction

text: not determined

text: Neisseria sicca ATCC 29256

characteristic: organism

text: Neisseria sicca ATCC 29256

characteristic: project name

text: Reference Genome

text: not determined

text: ATCC 29256, ATCC 49276, CDN 16, NRL 30016

text: Homo sapiens

text: ATCC 29256

text: MIGS Cultured Bacterial/Archaeal sample from Neisseria sicca ATCC 29256


text: Washington University, Genome Sequencing Center

text: live

text: MIGS.ba

text: Newbler v. 2.0.00.20

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

text: Neisseria subflava strain NJ9703

characteristic: estimated size

characteristic: feature

text: Level 3: Improved-High-Quality Draft14.3x;74

characteristic: finishing strategy (depth of coverage)

text: not determined

characteristic: geo loc name

characteristic: host taxid

text: not determined

text: not determined

characteristic: lat lon

text: biological product [ENVO:02000043]

text: not determined

characteristic: misc_param: HMP body site

text: oral

characteristic: misc_param: HMP supersite

text: not determined

text: not determined

text: Neisseria subflava NJ9703

text: Neisseria subflava NJ9703

text: Reference Genome

text: not determined

characteristic: sequencing method

characteristic: sop

text: BEI Shipping

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Neisseria subflava NJ9703


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: not determined

text: terrestrial biome [ENVO:00000446]

text: not determined

characteristic: culture-collection

text: Neisseria polysaccharea strain ATCC 43768

characteristic: description

text: human-associated habitat [ENVO:00009003]

text: Level 2: High-Quality Draft17.3x;139

text: not determined

text: not determined

text: not determined

text: biological product [ENVO:02000043]

characteristic: material

text: not determined

text: airways

text: not determined

characteristic: nucleic acid extraction

text: not determined

text: Neisseria polysaccharea ATCC 43768

characteristic: organism

text: Neisseria polysaccharea ATCC 43768

text: Reference Genome

text: not determined

text: ATCC 43768, NCTC 11858, CIP 100.113, LNP N462, NGC 11858

text: Homo sapiens

text: ATCC 43768

text: MIGS Cultured Bacterial/Archaeal sample from Neisseria polysaccharea ATCC 43768

characteristic: title


text: live

text: MIGS.ba

text: not determined

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

text: Oribacterium sp. oral taxon 078 strain F0262

characteristic: estimated size

characteristic: feature

text: Level 3: Improved-High-Quality Draft26.6x;48

characteristic: finishing strategy (depth of coverage)

text: not determined

characteristic: geo loc name

characteristic: host taxid

text: not determined

text: not determined

characteristic: lat lon

text: biological product [ENVO:02000043]

text: not determined

characteristic: misc_param: HMP body site

text: oral

characteristic: misc_param: HMP supersite

text: not determined

text: not determined

text: Oribacterium sp. oral taxon 078 F0262

characteristic: project name

text: Reference Genome

text: not determined

characteristic: sequencing method

characteristic: sop

text: BEI HM-11

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Oribacterium sp. oral taxon 078 str. F0262


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Newbler v. 2.0.00.20

text: terrestrial biome [ENVO:00000446]

text: not determined

characteristic: culture-collection

text: Parabacteroides johnsonii M-165

characteristic: description

text: Level 2: High-Quality Draft16.4x;527

text: not determined

text: not determined

text: not determined

text: biological product [ENVO:02000043]

characteristic: material

text: not determined

text: not determined

characteristic: nucleic acid extraction

text: not determined

text: Parabacteroides johnsonii DSM 18315

characteristic: organism

text: Parabacteroides johnsonii DSM 18315

text: Reference Genome

text: not determined

text: 454-GS-FLX, Sanger

text: DSM 18315, CIP 109537, JCM 13406

text: Homo sapiens

text: DSM 18315

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Parabacteroides johnsonii DSM 18315


text: live

text: MIGS.ba

text: not determined

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

text: Prevotella tannerae strain ATCC 51259

characteristic: estimated size

characteristic: feature

text: Level 3: Improved-High-Quality Draft30.2x;117

characteristic: finishing strategy (depth of coverage)

text: not determined

characteristic: geo loc name

characteristic: host taxid

text: not determined

text: not determined

characteristic: lat lon

text: biological product [ENVO:02000043]

text: Gingival crevices

characteristic: misc_param: HMP body site

text: oral

characteristic: misc_param: HMP supersite

text: not determined

text: not determined

text: Alloprevotella tannerae ATCC 51259

text: Prevotella tannerae ATCC 51259

characteristic: project name

text: Reference Genome

text: not determined

characteristic: sequencing method

characteristic: sop

text: ATCC 51259, VPI N14B-15

text: Homo sapiens

text: ATCC 51259

text: MIGS Cultured Bacterial/Archaeal sample from Prevotella tannerae ATCC 51259

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: not determined

text: terrestrial biome [ENVO:00000446]

text: not determined

text: Prevotella veroralis strain F0319

characteristic: description

text: Level 3: Improved-High-Quality Draft36.3x;98

text: not determined

text: not determined

text: not determined

text: biological product [ENVO:02000043]

characteristic: material

text: Gingival crevices

text: oral

text: not determined

characteristic: nucleic acid extraction

text: not determined

text: Prevotella veroralis F0319

characteristic: organism

text: Prevotella veroralis F0319

text: Reference Genome

text: not determined

text: BEI HM-92

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Prevotella veroralis F0319


text: live

text: Generic

text: Proteus penneri strain ATCC 35198

text: Proteus penneri ATCC 35198

text: ATCC 35198

characteristic: strain

text: Generic sample from Proteus penneri ATCC 35198


text: live

text: MIGS.ba

text: Newbler v. 2.0.00.20

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

characteristic: culture-collection

text: Providencia alcalifaciens NCTC 10286

characteristic: estimated size

characteristic: feature

text: Level 2: High-Quality Draft28.8x;79

characteristic: finishing strategy (depth of coverage)

text: not determined

characteristic: geo loc name

characteristic: host taxid

text: not determined

text: not determined

characteristic: lat lon

text: biological product [ENVO:02000043]

text: not determined

characteristic: misc_param: HMP body site

characteristic: misc_param: HMP supersite

text: not determined

text: not determined

text: Providencia alcalifaciens DSM 30120

text: Providencia alcalifaciens DSM 30120

characteristic: project name

text: Reference Genome

text: not determined

characteristic: sequencing method

characteristic: sop

text: NCTC 10286, DSM 30120, CIP 82.90, ATCC 9886

text: Homo sapiens

text: DSM 30120

text: MIGS Cultured Bacterial/Archaeal sample from Providencia alcalifaciens DSM 30120


characteristic: External Id

text: Washington University, Genome Sequencing Center

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Newbler v. 2.0.00.20

text: terrestrial biome [ENVO:00000446]

text: not determined

characteristic: description

text: Level 3: Improved-High-Quality Draft17.2x;283

text: not determined

text: not determined

text: not determined

text: biological product [ENVO:02000043]

characteristic: material

text: not determined

text: not determined

characteristic: nucleic acid extraction

text: not determined

text: Providencia rettgeri DSM 1131

characteristic: organism

text: Providencia rettgeri DSM 1131

text: Reference Genome

text: not determined

text: DSM 1131, NCTC 7481

text: Homo sapiens

characteristic: specific host

text: DSM 1131

text: MIGS Cultured Bacterial/Archaeal sample from Providencia rettgeri DSM 1131

characteristic: title


text: live

text: MIGS.ba

text: Newbler v. 2.0.00.20

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

characteristic: culture-collection

text: Providencia rustigianii strain DSM 4541

characteristic: estimated size

text: human-associated habitat [ENVO:00009003]

characteristic: feature

text: Level 3: Improved-High-Quality Draft19.8x;127

characteristic: finishing strategy (depth of coverage)

text: not determined

characteristic: geo loc name

characteristic: host taxid

text: not determined

text: not determined

characteristic: lat lon

text: biological product [ENVO:02000043]

text: not determined

characteristic: misc_param: HMP body site

characteristic: misc_param: HMP supersite

text: not determined

text: not determined

text: Providencia rustigianii DSM 4541

text: Providencia rustigianii DSM 4541

characteristic: project name

text: Reference Genome

text: not determined

characteristic: sequencing method

text: DSM 4541, ATCC 33673

text: Homo sapiens

text: DSM 4541

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Providencia rustigianii DSM 4541


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Newbler v. 2.0.00.20

text: terrestrial biome [ENVO:00000446]

text: not determined

text: Roseburia intestinalis strain L1-82

characteristic: description

text: Level 3: Improved-High-Quality Draft15.8x;728

text: not determined

text: not determined

text: not determined

text: biological product [ENVO:02000043]

characteristic: material

text: not determined

text: not determined

characteristic: nucleic acid extraction

text: not determined

text: Roseburia intestinalis L1-82

characteristic: organism

text: Roseburia intestinalis L1-82

text: Reference Genome

text: not determined

characteristic: sop

text: DSM 14610, NCIMB 13810

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Roseburia intestinalis L1-82


text: live

text: MIGS.ba

text: Newbler v. 2.0.00.20

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

characteristic: culture-collection

text: Roseburia inulinivorans A2-194

characteristic: estimated size

characteristic: feature

text: Level 2: High-Quality Draft15.8x;179

characteristic: finishing strategy (depth of coverage)

text: not determined

characteristic: geo loc name

characteristic: host taxid

text: not determined

text: not determined

characteristic: lat lon

text: biological product [ENVO:02000043]

text: not determined

characteristic: misc_param: HMP body site

characteristic: misc_param: HMP supersite

text: not determined

text: not determined

text: Roseburia inulinivorans DSM 16841

text: Roseburia inulinivorans DSM 16841

characteristic: project name

text: Reference Genome

text: not determined

characteristic: sequencing method

text: DSM 16841

text: Homo sapiens

text: DSM 16841

text: MIGS Cultured Bacterial/Archaeal sample from Roseburia inulinivorans DSM 16841

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Ruminococcus hydrogenotrophicus DSM 10507

characteristic: description

text: Blautia hydrogenotrophica DSM 10507

characteristic: organism

text: DSM 10507

characteristic: strain

text: Generic sample from Blautia hydrogenotrophica DSM 10507


text: live

text: MIGS.ba

text: not determined

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

characteristic: culture-collection

text: Selenomonas sputigena str. ATCC 35185

characteristic: estimated size

characteristic: feature

text: Level 3: Improved-High-Quality Draft26.6x;72

characteristic: finishing strategy (depth of coverage)

text: not determined

characteristic: geo loc name

characteristic: host taxid

text: not determined

text: not determined

characteristic: lat lon

text: biological product [ENVO:02000043]

characteristic: material

text: Gingival crevices

characteristic: misc_param: HMP body site

text: oral

text: not determined

characteristic: nucleic acid extraction

text: not determined

text: Selenomonas sputigena ATCC 35185

text: Selenomonas sputigena ATCC 35185

text: Reference Genome

text: not determined

characteristic: sop

text: ATCC 35185, VPI D19B-28

text: Homo sapiens

characteristic: specific host

text: ATCC 35185

text: MIGS Cultured Bacterial/Archaeal sample from Selenomonas sputigena ATCC 35185


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: not determined

text: terrestrial biome [ENVO:00000446]

text: not determined

text: Slackia exigua strain ATCC 700122

characteristic: description

text: Level 3: Improved-High-Quality Draft29.6x;29

text: not determined

text: not determined

text: not determined

text: biological product [ENVO:02000043]

text: not determined

text: oral

characteristic: misc_param: HMP supersite

text: not determined

text: not determined

text: Slackia exigua ATCC 700122

characteristic: organism

text: Slackia exigua ATCC 700122

characteristic: project name

text: Reference Genome

text: not determined

characteristic: sequencing method

text: ATCC 700122

text: Homo sapiens

text: ATCC 700122

text: MIGS Cultured Bacterial/Archaeal sample from Slackia exigua ATCC 700122

characteristic: title


text: live

text: MIGS.ba

text: Newbler v. 2.0.0-PostRelease-10/28/2008

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

text: Subdoligranulum variabile DSM15176

characteristic: estimated size

characteristic: feature

text: Level 3: Improved-High-Quality Draft23.9x;140

characteristic: finishing strategy (depth of coverage)

text: not determined

characteristic: geo loc name

characteristic: host taxid

text: not determined

text: not determined

characteristic: lat lon

text: biological product [ENVO:02000043]

characteristic: material

text: not determined

characteristic: misc_param: HMP body site

text: not determined

characteristic: nucleic acid extraction

text: not determined

text: Subdoligranulum variabile DSM 15176

text: Subdoligranulum variabile DSM 15176

text: Reference Genome

text: not determined

characteristic: sop

text: DSM 15176, CCUG 47106

text: Homo sapiens

text: DSM 15176

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Subdoligranulum variabile DSM 15176


characteristic: External Id

text: Washington University, Genome Sequencing Center

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: not determined

text: terrestrial biome [ENVO:00000446]

text: not determined

characteristic: culture-collection

text: Veillonella dispar strain ATCC 17748

characteristic: description

text: Level 3: Improved-High-Quality Draft41.6x;25

text: not determined

text: not determined

text: not determined

text: biological product [ENVO:02000043]

text: Mouth

text: oral

characteristic: misc_param: HMP supersite

text: not determined

text: not determined

text: Veillonella dispar ATCC 17748

characteristic: organism

text: Veillonella dispar ATCC 17748

characteristic: project name

text: Reference Genome

text: not determined

text: ATCC 17748

text: Homo sapiens

characteristic: specific host

text: ATCC 17748

text: MIGS Cultured Bacterial/Archaeal sample from Veillonella dispar ATCC 17748


Clostridium cellulovorans 743B

text: Mie University

text: live

text: Generic

text: Clostridium cellulovorans 743B

text: ATCC 35296

text: Generic sample from Clostridium cellulovorans 743B

characteristic: title

text: type strain of Clostridium cellulovorans

characteristic: type material


Amaranthus tuberculatus genomic

characteristic: External Id

text: University of Illinois at Urbana-Champaign

text: live

text: Generic

text: ACR

characteristic: biotype

text: USA: Adams Co., Illinois

characteristic: country

text: herbicide-resistant waterhemp plant from Adams Co., IL (ACR population). resistant to acetolactate synthase (ALS) inhibitors

text: Amaranthus tuberculatus

text: ACR

characteristic: population

text: leaf

characteristic: tissue

text: Amaranthus tuberculatus ACR


PHF8 in HeLa

text: Center for Genomic Regulation

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: antibody ab35471

text: HeLa S3

characteristic: cell line

text: Mutations in PHF8 are associated with X-linked mental retardation and cleft lip/cleft palate. PHF8 contains a plant homeodomain (PHD) in its N-terminus and is member of a family of JmjC-domain containing proteins. While PHDs can act as methyl lysine recognition motifs, JmjC-domains can catalyze lysine demethylation. Here, we show that PHF8 is a histone demethylase that removes repressive histone H3 dimethyl lysine 9 marks. Our biochemical analysis revealed specific association of the PHF8 PHD domain with histone H3 trimethylated at lysine 4 (H3K4me3). Chromatin-immunoprecipitation followed by high throughput sequencing indicated that PHF8 is enriched at transcription start sites of many active or poised genes, mirroring the presence of RNA polymerase II (RNAPII) and of H3K4me3-bearing nucleosomes. We show that PHF8 can act as a transcriptional co-activator and its activation function largely depends on binding of the PHD to H3K4me3. Furthermore, we present evidence for direct interaction of PHF8 with the C-terminal domain of RNAPII. Importantly, a PHF8 disease mutant is defective in demethylation and in co-activation. This is the first demonstration of a chromatin-modifying enzyme, which associates with promoters via the H3K4me3 modification and RNAPII.

characteristic: fixed sonicated chromatin

text: 135 +/- 25

characteristic: fragment size

text: Homo sapiens

characteristic: read length

text: Generic sample from Homo sapiens


PHF8 in 293T

text: Center for Genomic Regulation

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: description

text: 135 +/- 25

text: Homo sapiens

characteristic: organism

text: Generic sample from Homo sapiens

characteristic: title


PHF8 in serum-starved Hs68

characteristic: External Id

text: Center for Genomic Regulation

text: live

text: Generic

text: serum-starved for 4 days

characteristic: condition

text: 135 +/- 25

text: Homo sapiens

text: Generic sample from Homo sapiens


PHF8 in serum-stimulated Hs68

text: Center for Genomic Regulation

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: serum-starved for 4 days; re-stimulated for 4 hours

text: 135 +/- 25

text: Homo sapiens

text: Generic sample from Homo sapiens


H3K4me3 in serum-starved Hs68

text: Center for Genomic Regulation

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: antibody ab8580

text: serum-starved for 4 days

text: 135 +/- 25

text: Homo sapiens

text: Generic sample from Homo sapiens


H3K4me3 in serum-stimulated Hs68

characteristic: Cell line

text: Center for Genomic Regulation

text: live

characteristic: INSDC status

text: Generic

text: serum-starved for 4 days; re-stimulated for 4h

text: 135 +/- 25

text: Homo sapiens

text: Generic sample from Homo sapiens


Control IgG in HeLa

text: Center for Genomic Regulation

text: live

text: Generic

characteristic: antibody sc-2027

text: HeLa S3

characteristic: cell line

characteristic: fixed sonicated chromatin

text: 135 +/- 25

characteristic: fragment size

text: Homo sapiens

text: Generic sample from Homo sapiens


Control IgG in 293T

text: Center for Genomic Regulation

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: 135 +/- 25

text: Homo sapiens

characteristic: read length

text: Generic sample from Homo sapiens


Input DNA from serum-starved Hs68

characteristic: External Id

text: Center for Genomic Regulation

text: live

text: Generic

text: serum-starved for 4 days

characteristic: description

text: 135 +/- 25

text: Homo sapiens

characteristic: organism

text: Generic sample from Homo sapiens

characteristic: title


Input DNA from serum-stimulated Hs68

text: Center for Genomic Regulation

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: condition

text: 135 +/- 25

text: Homo sapiens

text: Generic sample from Homo sapiens


text: Gene Expression Omnibus

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: source: 12 adult Chinese Amphioxus; description: total RNAs extracted from a pool of 12 adult Chinese Amphioxus

text: adult

characteristic: developmental stage

text: Branchiostoma belcheri

text: Generic sample from Branchiostoma belcheri


text: Massachusetts Institute of Technology

text: live

text: Generic

text: planktonic microbial community, Central North Pacific Subtropical Gyre, Station ALOHA, 500 m depth

text: marine metagenome

text: Generic sample from marine metagenome


Buffalo genome

text: Sandor Proteomics

text: live

text: Generic

text: farm bred Murrah heifer female

text: Bubalus bubalis

text: Indian Murrah Buffalo


Symbiotic bacteria

text: Chinese National Human Genome Center at Shanghai

text: live

text: Generic

text: To accumulate microbial communities with M. aeruginosa, the sample was inoculated onto sterile BG-11 medium in 5.5-cm agar plates, using standard aseptic technique. Cultures were grown at 30*C in a 12:12 h light: dark (LD) cycle at 3000 lx., 3 days.

text: Microcystis

text: Generic sample from Microcystis


Apis mellifera queen ovary RNA

text: live

text: Generic

text: Apis mellifera

text: Generic sample from Apis mellifera


name: Yale University- The Viral Metagenome of a Mesophillic Anaerobic Digester

text: Yale University

text: live

text: Generic

text: DNA and cDNA from viruses isolated from Class B biosolids from a municipal mesophillic anaerobic digester

text: metagenome


MDES

text: Baylor College of Medicine

text: live

text: Generic

text: Mayetiola destructor

text: Mayetiola destructor

text: Great Plains

characteristic: strain

text: Mayetiola destructor (Hessian fly)


text: Department of Biochemistry, Gene Center, University of Munich

text: live

text: Generic

text: Schizosaccharomyces pombe

text: wildtype S. pombe

text: wild type

text: wild type


text: live

text: Generic

text: wild type strain expressing ago1D580 mutant

characteristic: mutant description

text: Schizosaccharomyces pombe

text: mutant S. pombe

text: wild type + ago1D580A

text: wild type + ago1D580A


text: live

text: Generic

characteristic: NCBI submission model

text: deletion of RNA-directed RNA polymerase Rdp1

text: Schizosaccharomyces pombe

text: mutant S. pombe


text: live

text: Generic

characteristic: NCBI submission package

text: deletion of Dicer

text: Schizosaccharomyces pombe

text: mutant S. pombe


text: live

text: Generic

characteristic: SRA accession

text: deletion of nucleotidyltransferase Cid12

text: Schizosaccharomyces pombe

text: mutant S. pombe


text: live

text: Generic

text: Cid12 deletion strain overexpressing Rdp1

text: Schizosaccharomyces pombe

text: mutant S. pombe

text: cid12Δ + nmt1-rdp1+

text: cid12Δ + nmt1-rdp1+


text: live

text: Generic

text: deletion of histone H3 methyltransferase Clr4

text: Schizosaccharomyces pombe

text: mutant S. pombe


text: live

text: Generic

text: deletion of argonaute binding protein 1

text: Schizosaccharomyces pombe

text: mutant S. pombe


text: live

text: Generic

text: deletion of argonaute binding protein 2

text: Schizosaccharomyces pombe

text: mutant S. pombe


text: live

text: Generic

text: deletion of chromodomain protein Chp1

text: Schizosaccharomyces pombe

text: mutant S. pombe


text: live

text: Generic

text: deletion of HP1 protein Swi6

text: Schizosaccharomyces pombe

text: mutant S. pombe


text: live

text: Generic

text: mutation in 3'-5' exoribonuclease subunit Dis3

text: Schizosaccharomyces pombe

text: mutant S. pombe


text: live

text: Generic

text: deletion of Dicer and mutation in 3'-5' exoribonuclease subunit Dis3

text: Schizosaccharomyces pombe

text: mutant S. pombe


text: Research Computing Group, Genome Institute of Singapore

text: live

text: Generic

text: ChIA-PET

characteristic: library

text: Homo sapiens

text: MCF-7 cells

text: ERα_ChIA-PET_Replicate1 (454)


characteristic: External Id

text: live

text: Generic

text: ChIP-PET

text: Homo sapiens

text: MCF-7 cells

text: ERα_ChIP-PET (454)


text: live

text: Generic

text: ChIA-PET

text: Homo sapiens

text: MCF-7 cells

text: IgG_ChIA-PET (454)


text: live

text: Generic

text: ChIA-PET

text: Homo sapiens

text: MCF-7 cells

text: ERα_ChIA-PET_Replicate1 (Illumina)


text: live

text: Generic

text: ChIA-PET

text: Homo sapiens

text: MCF-7 cells

text: ERα_ChIA-PET_Replicate2 (Illumina)


text: live

text: Generic

characteristic: antibody target

text: ChIP-Seq

text: Homo sapiens

text: MCF-7 cells

text: H3K4me3_ChIP-Seq_SCS773 (Illumina)


text: live

text: Generic

text: ChIP-Seq

text: Homo sapiens

characteristic: organism

text: MCF-7 cells

text: H3K4me3_ChIP-Seq_SCS805 (Illumina)


text: live

text: Generic

text: RNA Polymerase II (RNAPII)

text: ChIP-Seq

text: Homo sapiens

text: MCF-7 cells

text: RNAPII_ChIP-Seq_IHM034 (Illumina)

characteristic: title


characteristic: INSDC center name

text: live

text: Generic

text: RNA Polymerase II (RNAPII)

text: ChIP-Seq

text: Homo sapiens

text: MCF-7 cells

text: RNAPII_ChIP-Seq_IHM035 (Illumina)


characteristic: INSDC first public

text: live

text: Generic

text: RNA Polymerase II (RNAPII)

text: ChIP-Seq

text: Homo sapiens

text: MCF-7 cells

text: RNAPII_ChIP-Seq_IHM036 (Illumina)


text: Washington University, Genome Sequencing Center

characteristic: INSDC last update

text: live

text: Generic

text: NK cells were flow sorted from resting C57Bl/6 mouse spleens (>97% NK1.1 CD3-). Resting NK cells were immediately lysed for RNA isolation, and activated NK cells were stimulated with rmIL-15 for 24 hours prior to lysis for RNA isolation.

characteristic: description

text: Mus musculus

text: Mouse NK cells; resting and activated (IL-15)


text: Institute of Animal Genetics and Breeding, College of Animal Science and Technology, Sichuan Agricultural University

characteristic: INSDC secondary accession

text: live

text: Generic

text: prenatal, fetus at day 30

text: Sus scrofa

text: E30d (fetus at day 30)

text: prenatal, fetus at day 30


text: live

characteristic: INSDC status

text: Generic

text: prenatal, fetus at day 45

text: Sus scrofa

text: E45d (fetus at day 45)

text: prenatal, fetus at day 45


text: live

text: Generic

text: prenatal, fetus at day 60

characteristic: developmental stage

text: Sus scrofa

text: E60d (fetus at day 60)

text: prenatal, fetus at day 60


text: live

text: Generic

text: prenatal, fetus at day 75

text: Sus scrofa

text: E75d (fetus at day 75)

text: prenatal, fetus at day 75


text: live

text: Generic

text: prenatal, fetus at day 90

text: Sus scrofa

text: E90d (fetus at day 90)

text: prenatal, fetus at day 90


text: live

text: Generic

text: prenatal, fetus at day 105

text: Sus scrofa

text: E105d (fetus at day 105)

text: prenatal, fetus at day 105


text: live

text: Generic

text: postnatal (birth day)

text: Sus scrofa

text: Birth

text: postnatal (birth day)


text: live

text: Generic

text: postnatal (day 30)

text: Sus scrofa

text: at day 30

text: postnatal (day 30)


text: live

text: Generic

text: postnatal (day 120)

text: Sus scrofa

text: at day 120

text: postnatal (day 120)


text: live

text: Generic

text: postnatal (day 180)

text: Sus scrofa

text: at day 180

text: postnatal (day 180)


text: Gurdon Institute, University of Cambridge

text: live

text: Generic

text: Embryonic stem cell

characteristic: cell type

text: Mus musculus

text: Dicer1-null ES cells

characteristic: strain

text: miRNA transfected: miR-294 Ago2-myc: wild-type (WT)

characteristic: variable


text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Embryonic stem cell

text: Mus musculus

text: Dicer1-null ES cells

text: miRNA transfected: miR-294 Ago2-myc: catalytically-inactive (MUT)


text: live

text: Generic

characteristic: SRA accession

text: Embryonic stem cell

text: Mus musculus

text: Dicer1-null ES cells

text: miRNA transfected: cel-239b control Ago2-myc: wild-type (WT)


LLON

characteristic: External Id

text: Baylor College of Medicine

text: live

text: Generic

text: Lutzomyia longipalpis

text: Lutzomyia longipalpis

text: Generic sample from Lutzomyia longipalpis


text: UMR BiO3P, INRA

text: live

text: Generic

text: Acyrthosiphon pisum

text: parthenogenetic colony

text: small RNAs-parthenogenetic


text: Naama Barkai, Molecular genetics, Weizmann Institute of Science

text: live

text: Generic

text: Saccharomyces cerevisiae

text: Mnase-digested genomic DNA

text: S. cerevisiae (BY4743), S. paradoxus (CBS 432 ho::nat MATα)


text: live

text: Generic

text: Saccharomyces cerevisiae

text: Mnase-digested genomic DNA

text: S. cerevisiae (BY4743 Dhtz1), S. paradoxus (CBS 432 ho::nat MATα Dhtz1)

text: Dhtz1_parents1 and parents2


text: live

text: Generic

text: Saccharomyces cerevisiae

text: Mnase-digested genomic DNA

text: S. cerevisiae (BY4743 Disw1), S. paradoxus (CBS 432 ho::nat MATα Disw1)

text: Disw1_parents1 and parents2


text: live

text: Generic

text: Saccharomyces cerevisiae

text: Mnase-digested genomic DNA

text: S. cerevisiae (BY4743 Dgcn5), S. paradoxus (CBS 432 ho::nat MATα Dgcn5)

text: Dgcn5_parents1 and parents2


text: live

text: Generic

text: Saccharomyces cerevisiae

text: Mnase-digested genomic DNA

text: S. cerevisiae (BY4743 Dbre1), S. paradoxus (CBS 432 ho::nat MATα Dbre1)


text: live

text: Generic

text: Saccharomyces cerevisiae

text: Mnase-digested genomic DNA

text: S. cerevisiae (BY4743 Drad6), S. paradoxus (CBS 432 ho::nat MATα Drad6)


text: live

text: Generic

text: Saccharomyces cerevisiae

text: Mnase-digested naked genomic DNA

text: WT_control_parents1 and parents2


text: live

text: Generic

text: Saccharomyces cerevisiae x Saccharomyces paradoxus

text: Mnase-digested genomic DNA

text: (BY4741 X CBS432 ho::nat MATα)


text: live

text: Generic

text: Mnase-digested genomic DNA

text: (BY4741 Dhtz1 X CBS432 ho::nat MATα Dhtz1)

text: Dhtz1_hybrid1 and hybrid2


text: live

text: Generic

text: Mnase-digested genomic DNA

text: (BY4741 Disw1 X CBS432 ho::nat MATα Disw1 )

text: Disw1_hybrid1 and hybrid2


text: live

text: Generic

text: Mnase-digested genomic DNA

text: (BY4741 Dgcn5 X CBS432 ho::nat MATα Dgcn5)

text: Dgcn5_hybrid1 and hybrid2


text: live

text: Generic

text: Mnase-digested genomic DNA

text: (BY4741 X CBS432 ho::nat MATα)

text: WT_control_hybrid1 and hybrid 2


text: Allis Laboratory, Laboratory of Chromatin Biology, The Rockefeller University

text: live

text: Generic

text: C6 embryonic stem cells

text: anti-HA (12CA5)

characteristic: chip antibody

text: Mus musculus

characteristic: passages

text: Embryonic stem cells

text: C57BL/6 H3.3-HA / H3.3B


text: live

text: Generic

text: C6 embryonic stem cells

text: Mus musculus

characteristic: organism

text: Embryonic stem cells

text: C57BL/6 H3.3-HA / H3.3B

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: C6 embryonic stem cells

text: anti-RNAPII_Ser5p (CTD4H8)

text: Mus musculus

text: Embryonic stem cells

text: C57BL/6 H3.3-HA / H3.3B


characteristic: INSDC last update

text: live

text: Generic

text: C6 embryonic stem cells

text: anti-HA (12CA5)

text: Mus musculus

text: Embryonic stem cells

text: C57BL/6 H3.2-HA / H3.3B


characteristic: INSDC secondary accession

text: live

text: Generic

text: C6 embryonic stem cells

text: Mus musculus

text: Embryonic stem cells

text: C57BL/6 H3.2-HA / H3.3B


text: live

characteristic: INSDC status

text: Generic

text: ES-derived neural progenitor cells

text: anti-HA (12CA5)

text: Mus musculus

text: Neural progenitor cells

text: C57BL/6 H3.3-HA / H3.3B


text: live

text: Generic

text: ES-derived neural progenitor cells

text: Mus musculus

text: Neural progenitor cells

text: C57BL/6 H3.3-HA / H3.3B


text: live

text: Generic

text: ES-derived neural progenitor cells

text: anti-RNAPII_Ser5p (CTD4H8)

text: Mus musculus

text: Neural progenitor cells

text: C57BL/6 H3.3-HA / H3.3B


text: live

text: Generic

text: ES-derived neural progenitor cells

text: anti-HA (12CA5)

text: Mus musculus

text: Neural progenitor cells

text: C57BL/6 H3.2-HA / H3.3B


text: live

text: Generic

text: ES-derived neural progenitor cells

text: Mus musculus

text: Neural progenitor cells

text: C57BL/6 H3.2-HA / H3.3B


text: live

text: Generic

text: F1 hybrid 965 embryonic stem cells

text: x-link ChIP input control. No antibody.

text: Mus musculus

text: Embryonic stem cells

text: 129SvJae x M. m. castaneus F1 H3.3-HA / H3.3B

characteristic: strain/genotype


text: live

text: Generic

text: F1 hybrid 965 embryonic stem cells

characteristic: cell type

text: anti-HA (12CA5)

text: Mus musculus

text: Embryonic stem cells


text: live

text: Generic

text: F1 hybrid 965 embryonic stem cells

text: H3K36me3 (Abcam ab9050)

text: Mus musculus

text: Embryonic stem cells


text: live

text: Generic

text: F1 hybrid 965 embryonic stem cells

text: x-link ChIP input control. No antibody.

text: Mus musculus

text: Embryonic stem cells

text: 129SvJae x M. m. castaneus F1 H3.1S31-HA / H3.3B


text: live

text: Generic

text: F1 hybrid 965 embryonic stem cells

text: anti-HA (12CA5)

text: Mus musculus

text: Embryonic stem cells


text: live

text: Generic

text: F1 hybrid 965 embryonic stem cells

text: H3K36me3 (Abcam ab9050)

text: Mus musculus

text: Embryonic stem cells


text: live

text: Generic

text: C6 embryonic stem cells

text: anti-HA (12CA5)

text: Mus musculus

text: Embryonic stem cells

text: C57BL/6 H3.3-HA / H3.3B

characteristic: strain


text: live

text: Generic

text: C6 embryonic stem cells

text: anti-HA (12CA5)

text: Mus musculus

text: Embryonic stem cells

text: C57BL/6 H3.2-HA / H3.3B


text: live

text: Generic

text: C6 embryonic stem cells

text: H3K4me3 (Abcam ab8580)

text: Mus musculus

text: Embryonic stem cells

text: C57BL/6 H3.2-HA / H3.3B


text: live

text: Generic

text: C6 embryonic stem cells

text: H3K27me3 (Upstate/Millipore #07-449)

text: Mus musculus

text: Embryonic stem cells

text: C57BL/6 H3.2-HA / H3.3B


text: live

text: Generic

text: C6 embryonic stem cells

text: native ChIP input control. No antibody.

text: Mus musculus

text: Embryonic stem cells

text: C57BL/6 H3.2-HA / H3.3B


text: live

text: Generic

text: C6 embryonic stem cells

text: anti-GFP (Cristea et al., 2005)

text: Mus musculus

text: Embryonic stem cells

text: C57BL/6 H3.3-EYFP / H3.3B


text: live

text: Generic

text: native ChIP input control. No antibody.

text: Mus musculus

text: Embryonic stem cells

text: C57BL/6 H3.3-EYFP / H3.3B


text: live

text: Generic

text: C6 embryonic stem cells

text: H3K4me1 (Abcam ab8895)

text: Mus musculus

text: Embryonic stem cells

text: C57BL/6 H3.3-EYFP / H3.3B


text: live

text: Generic

text: C6 embryonic stem cells

text: H3K36me3 (Abcam ab9050)

text: Mus musculus

text: Embryonic stem cells

text: C57BL/6 H3.3-EYFP / H3.3B


text: live

text: Generic

text: cl34 Hira -/- embryonic stem cells

text: anti-GFP (Cristea et al., 2005)

text: Mus musculus

text: Embryonic stem cells

text: Hira -/- H3.3-EYFP / H3.3B


text: live

text: Generic

text: cl34 Hira -/- embryonic stem cells

text: H3K4me1 (Abcam ab8895)

text: Mus musculus

text: Embryonic stem cells

text: Hira -/- H3.3-EYFP / H3.3B

text: Hiranull_ES_H33_EYFP_antiH3K4me1_nChIPSeq


text: live

text: Generic

text: cl34 Hira -/- embryonic stem cells

text: H3K36me3 (Abcam ab9050)

text: Mus musculus

text: Embryonic stem cells

text: Hira -/- H3.3-EYFP / H3.3B

text: Hiranull_ES_H33_EYFP_antiH3K36me3_nChIPSeq


text: live

text: Generic

text: cl34 Hira -/- embryonic stem cells

text: native ChIP input control. No antibody.

text: Mus musculus

text: Embryonic stem cells

text: Hira -/- H3.3-EYFP / H3.3B


text: live

text: Generic

text: Atrxflox embryonic stem cells

text: anti-GFP (Cristea et al., 2005)

text: Mus musculus

text: Embryonic stem cells

text: Atrxflox H3.3-EYFP / H3.3B


text: live

text: Generic

text: Atrxflox embryonic stem cells

text: native ChIP input control. No antibody.

text: Mus musculus

text: Embryonic stem cells

text: Atrxflox H3.3-EYFP / H3.3B


text: live

text: Generic

text: Atrxnull embryonic stem cells

text: anti-GFP (Cristea et al., 2005)

text: Mus musculus

text: Embryonic stem cells

text: Atrxnull H3.3-EYFP / H3.3B


text: live

text: Generic

text: Atrxnull embryonic stem cells

text: native ChIP input control. No antibody.

text: Mus musculus

text: Embryonic stem cells

text: Atrxnull H3.3-EYFP / H3.3B


text: live

text: Generic

text: W9.5 embryonic stem cells

text: anti-HA (12CA5) control. No HA epitope in untagged ES cells

text: Mus musculus

text: Embryonic stem cells


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Segniliparus rotundus DSM 44985

characteristic: description

text: Segniliparus rotundus DSM 44985

text: DSM 44985

text: Generic sample from Segniliparus rotundus DSM 44985


Cerebrum

text: Beijing Institute of Genomics Chinese Acad of Sci - Key Lab

text: live

text: Generic

characteristic: NCBI submission model

text: 10w male BABL/c mouse

text: Mus musculus

text: Generic sample from Mus musculus


Testis

text: live

text: Generic

characteristic: NCBI submission package

text: 10w male BABL/c mouse

text: Mus musculus

text: Generic sample from Mus musculus


SMAR

text: Baylor College of Medicine

text: live

text: Generic

characteristic: SRA accession

text: Strigamia maritima

text: Strigamia maritima

text: Carn Liath Broch

text: Strigamia maritima


Dokdonia

characteristic: External Id

text: Massachusetts Institute of Technology

text: live

text: Generic

text: Test samples for rRNA subtraction from pure cultures

text: Dokdonia sp. MED134

text: Generic sample from Dokdonia donghaensis MED134


BATS

text: Massachusetts Institute of Technology

text: live

text: Generic

text: marine metagenome

text: Generic sample from marine metagenome


Monterey

text: Massachusetts Institute of Technology

text: live

text: Generic

text: Bacterioplankton collected via CTD rosette or by the Environmental Sample Processor near MBARI Station M0 (36.83 *N, 121.90 *W) in June 2009 at 10m depth. All samples collected on 0.22 um filter with a 5 um prefilter. Samples for community transcriptome sequencing were collected during an ESP deployment at station M0 from May 14 to June 11, 2009. DNA for metagenomic sequencing was extracted from 10L seawater collected by CTD rosette from a ship in close proximity to the ESP on June 2, 2009 at 0830 local time.

text: marine metagenome

text: Monterey Bay bacterioplankton; Station M0, 10m depth, June 2009


OMZ

text: Massachusetts Institute of Technology

text: live

text: Generic

text: marine metagenome

text: Generic sample from marine metagenome


delta ANR

text: Naval Medical Research Center, Biological Defense Research Directorate

text: live

text: Generic

text: (pXO1-, pXO2-)

text: Bacillus anthracis str. Ames

text: Ames

text: Bacillus anthracis delta ANR


text: live

text: Generic

text: (pXO1-, pXO2-); mid-level ciprofloxacin resistance

text: Bacillus anthracis str. Ames

text: Ames

text: Bacillus anthracis delta ANR HS-2-1


text: live

text: Generic

text: Bacillus anthracis str. Ames

text: Ames

text: Bacillus anthracis delta ANR HS-2-5


text: live

text: Generic

text: (pXO1-, pXO2-); high-level ciprofloxacin resistance

text: Bacillus anthracis str. Ames

text: Ames

text: Bacillus anthracis delta ANR HS-2-5-6


text: live

text: Generic

text: Bacillus anthracis str. Sterne (34F2, pXO1 , pXO2-)

text: Bacillus anthracis str. Sterne

text: Sterne

text: Bacillus anthracis str. Sterne 34F2


text: live

text: Generic

text: Bacillus anthracis str. Sterne (34F2, pXO1 , pXO2-); resistant to phage AP50c

text: Bacillus anthracis str. Sterne

text: Sterne

text: Bacillus anthracis str. Sterne 34F2


gerH

text: live

text: Generic

text: Bacillus anthracis str. Sterne (34F2, pXO1 , pXO2-) gerH::ery

text: Bacillus anthracis str. Sterne

text: Sterne

text: Bacillus anthracis str. Sterne 34F2 gerH::ery


text: Brenda L. Bass, Biochemistry, University of Utah

text: live

text: Generic

text: dcr-1(ok247) animals expressing transgene containing WT Dicer

characteristic: genotype/variation

text: Caenorhabditis elegans

text: whole organism

text: mixed

characteristic: stage

text: BB92: dcr-1(ok247); uuEx18[dcr-1(+), dpy-30::mCherry]


text: live

text: Generic

text: dcr-1(ok247) animals expressing transgene containing Dicer with K39A mutation

text: Caenorhabditis elegans

characteristic: organism

text: whole organism

text: mixed

text: BB93: dcr-1(ok247); uuEx18[dcr-1(K39A), dpy-30::mCherry]


text: DBI, Plant and Soil Sciences, University of Delaware

text: live

text: Generic

text: Columbia

characteristic: ecotype

text: IWR1-type transcription factor mutant, dms4

characteristic: genotype

text: Arabidopsis thaliana

text: Mixed stage inflorescense tissue

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Columbia

text: trasngenic wild type plant (contains trigger and silencer transgenes)

text: Arabidopsis thaliana

text: Mixed stage inflorescense tissue

text: WT (T+S)_sRNA


text: Molecular Biology, NCMLS

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: cell line

text: osteosarcoma

text: Homo sapiens

text: Saos-2 cell line


text: Molecular Biology, NCMLS

text: live

text: Generic

text: BL906 against p73

characteristic: antibody

text: osteosarcoma

characteristic: cell type

text: Tet-on TAp73alpha

characteristic: genetic modification

text: Homo sapiens

text: TAp73alpha Saos-2 cell line


text: Molecular Biology, NCMLS

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: BL906 against p73

text: osteosarcoma

text: Tet-on TAp73beta

text: Homo sapiens

text: TAp73beta Saos-2 cell line


characteristic: External Id

text: Molecular Biology, NCMLS

text: live

text: Generic

text: DO1 against p53

text: osteosarcoma

text: Tet-on FLp53

text: Homo sapiens

text: p53 Saos-2 cell line


text: Molecular Biology, NCMLS

text: live

text: Generic

text: osteosarcoma

text: Tet-on TAp73alpha

text: Homo sapiens

characteristic: organism

text: TAp73alpha Saos-2 cell line


text: Molecular Biology, NCMLS

text: live

text: Generic

text: osteosarcoma

text: Tet-on TAp73beta

text: Homo sapiens

text: TAp73beta Saos-2 cell line


text: Molecular Biology, NCMLS

text: live

text: Generic

text: osteosarcoma

text: Tet-on FLp53

text: Homo sapiens

text: p53 Saos-2 cell line


text: Washington University, Genome Sequencing Center

text: live

text: MIGS.ba

text: not determined

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

characteristic: culture-collection

text: Anaerobaculum hydrogeniformans Sp OS1

characteristic: description

characteristic: estimated size

text: human-associated habitat [ENVO:00009003]

characteristic: feature

text: Level 3: Improved-High-Quality Draft34.2x;205

characteristic: finishing strategy (depth of coverage)

text: not determined

characteristic: geo loc name

characteristic: host taxid

text: not determined

text: not determined

characteristic: lat lon

text: biological product [ENVO:02000043]

characteristic: material

text: Intestinal tract

characteristic: misc_param: HMP body site

characteristic: misc_param: HMP supersite

text: not determined

characteristic: nucleic acid extraction

text: not determined

text: Acetomicrobium hydrogeniformans ATCC BAA-1850

characteristic: project name

text: Reference Genome

text: not determined

text: 454, Sanger

characteristic: sequencing method

characteristic: sop

text: ATCC BAA-1850

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Anaerobaculum hydrogeniformans ATCC BAA-1850

text: type strain of Acetomicrobium hydrogeniformans

characteristic: type material


BTER

characteristic: External Id

text: Baylor College of Medicine

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Bombus terrestris

characteristic: description

text: Bombus terrestris

characteristic: organism

text: male

characteristic: sex

text: strain from the Schmid-Hempel Group; haploid drones

text: Bombus terrestris

characteristic: title


text: National Institute of Biological Sciences, Beijing

text: live

text: Generic

text: 5-6 weeks

characteristic: age

characteristic: antibody

text: Arabidopsis thaliana

text: 5-6 week old Arabidopsis leaves

text: leaves

characteristic: tissue


text: Computational Biology Section, Bioinformatics and Computational Biosciences Branch (BCBB), NIAID/NIH

text: live

text: Generic

text: RPC32 (Pol III)

characteristic: antigen

characteristic: cell line

text: sc-21754 (Santa Cruz Biotech.)

characteristic: chip antibody

text: Homo sapiens

text: HEK293T cell line


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: RPC32 (Pol III)

text: sc-21754 (Santa Cruz Biotech.)

text: Homo sapiens

text: Human foreskin fibroblast hTERT cell line

text: HumanForeskinFibroblast_Pol3ChIPseq_Rep1


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: HeLa S3

text: anti-RPB90 (R. Roeder)

text: Homo sapiens

text: HeLa S3 cell line


text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: HeLa S3

text: ab17011 (abcam)

text: Homo sapiens

text: HeLa S3 cell line


text: live

text: Generic

text: HeLa S3

text: Homo sapiens

characteristic: organism

text: HeLa S3 cell line


text: live

text: Generic

text: RPC32 (Pol III)

text: HeLa S3

text: sc-21754 (Santa Cruz Biotech.)

text: Homo sapiens

text: HeLa S3 cell line

characteristic: title


text: live

text: Generic

text: HeLa S3

text: A301-242A (Bethyl)

text: Homo sapiens

text: HeLa S3 cell line


text: live

text: Generic

text: RPC32 (Pol III)

text: Jurkat E6-1

text: sc-21754 (Santa Cruz Biotech.)

text: Homo sapiens

text: Jurkat E6-1 cell line


text: Institute for Cell and Molecular Biology, University of Texas at Austin

text: live

text: Generic

text: Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=NA12878

characteristic: biomaterial provider

characteristic: individual

text: Homo sapiens

text: lymphoblastoid cells


text: live

text: Generic

text: Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=NA12891

text: Homo sapiens

text: lymphoblastoid cells


text: live

text: Generic

text: Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=NA12892

text: Homo sapiens

text: lymphoblastoid cells


text: live

text: Generic

text: Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=NA19240

text: Homo sapiens

text: lymphoblastoid cells


text: live

text: Generic

text: Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=NA19238

text: Homo sapiens

text: lymphoblastoid cells


text: live

text: Generic

text: Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=NA19239

text: Homo sapiens

text: lymphoblastoid cells


AFLO

text: Baylor College of Medicine

text: live

text: Generic

text: Apis florea

characteristic: description

text: Apis florea

text: male

characteristic: sex

text: haploid drones

text: Generic sample from Apis florea


text: RIVM

text: live

text: Generic

text: Bordetella pertussis

text: Generic sample from Bordetella pertussis


characteristic: Coriell panel

text: KEN

characteristic: Coriell plate

characteristic: DNA id

text: NCBI

text: live

text: Generic

text: British From England and Scotland, UK

characteristic: Population Description

text: EUR

characteristic: Super Population Code

text: European

characteristic: Super Population Description

characteristic: culture collection

text: Human 1000 genomes individual HG00154

text: Homo sapiens

text: GBR

characteristic: population

text: female

text: Coriell HG00154


text: COR

characteristic: External Id

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: British From England and Scotland, UK

text: EUR

text: European

text: Human 1000 genomes individual HG00246

text: Homo sapiens

text: GBR

text: male

text: Coriell HG00246


text: COR

text: NCBI

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Human 1000 genomes individual HG00248

characteristic: description

text: Homo sapiens

characteristic: organism

text: GBR

text: female

text: Human 1000 genomes individual HG00248

characteristic: title


characteristic: Coriell panel

text: COR

characteristic: Coriell plate

characteristic: DNA id

text: NCBI

text: live

text: Generic

text: British From England and Scotland, UK

characteristic: Population Description

text: EUR

text: European

characteristic: bio-material

text: Human 1000 genomes individual HG00250

characteristic: isolate

text: Homo sapiens

text: GBR

text: female

characteristic: sex

text: B-lymphocyte cell-line

characteristic: tissue-type

text: Coriell HG00250


text: COR

characteristic: External Id

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: British From England and Scotland, UK

text: EUR

characteristic: Super Population Code

text: European

characteristic: Super Population Description

characteristic: culture collection

text: Human 1000 genomes individual HG00251

text: Homo sapiens

text: GBR

characteristic: population

text: male

text: Coriell HG00251


text: NCBI

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Finnish in Finland

characteristic: SRA accession

text: EUR

text: European

text: Human 1000 genomes individual HG00274

characteristic: description

text: Homo sapiens

characteristic: organism

text: FIN

text: female

text: Coriell HG00274

characteristic: title


characteristic: Coriell panel

characteristic: DNA id

text: NCBI

text: live

text: Generic

text: Finnish in Finland

characteristic: Population Description

text: EUR

text: European

text: Human 1000 genomes individual HG00275

text: Homo sapiens

text: FIN

text: female

characteristic: sex

text: Coriell HG00275


characteristic: External Id

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Finnish in Finland

text: EUR

text: European

text: Human 1000 genomes individual HG00276

text: Homo sapiens

text: FIN

text: female

text: Coriell HG00276


text: NCBI

text: live

text: Generic

text: Finnish in Finland

text: EUR

characteristic: Super Population Code

text: European

characteristic: Super Population Description

characteristic: culture collection

text: Human 1000 genomes individual HG00277

text: Homo sapiens

text: FIN

characteristic: population

text: male

text: Coriell HG00277


text: NCBI

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Finnish in Finland

text: EUR

text: European

text: Human 1000 genomes individual HG00278

text: Homo sapiens

text: FIN

text: male

text: Coriell HG00278


text: NCBI

text: live

text: Generic

text: Finnish in Finland

characteristic: SRA accession

text: EUR

text: European

text: Human 1000 genomes individual HG00280

characteristic: description

text: Homo sapiens

characteristic: organism

text: FIN

text: male

text: Coriell HG00280

characteristic: title


characteristic: Coriell panel

characteristic: DNA id

text: NCBI

text: live

text: Generic

text: Finnish in Finland

characteristic: Population Description

text: EUR

text: European

text: Human 1000 genomes individual HG00281

text: Homo sapiens

text: FIN

text: female

characteristic: sex

text: Coriell HG00281


characteristic: External Id

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Finnish in Finland

text: EUR

text: European

text: Human 1000 genomes individual HG00282

text: Homo sapiens

text: FIN

text: female

text: Coriell HG00282


text: NCBI

text: live

text: Generic

text: Finnish in Finland

text: EUR

characteristic: Super Population Code

text: European

characteristic: Super Population Description

characteristic: culture collection

text: Human 1000 genomes individual HG00284

text: Homo sapiens

text: FIN

characteristic: population

text: male

text: Coriell HG00284


text: NCBI

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Finnish in Finland

text: EUR

text: European

text: Human 1000 genomes individual HG00285

text: Homo sapiens

text: FIN

text: female

text: Coriell HG00285


text: NCBI

text: live

text: Generic

text: Finnish in Finland

characteristic: SRA accession

text: EUR

text: European

text: Human 1000 genomes individual HG00310

characteristic: description

text: Homo sapiens

characteristic: organism

text: FIN

text: male

text: Coriell HG00310

characteristic: title


characteristic: Coriell panel

characteristic: DNA id

text: NCBI

text: live

text: Generic

text: Finnish in Finland

characteristic: Population Description

text: EUR

text: European

text: Human 1000 genomes individual HG00324

text: Homo sapiens

text: FIN

text: female

characteristic: sex

text: Coriell HG00324


characteristic: External Id

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Finnish in Finland

text: EUR

text: European

text: Human 1000 genomes individual HG00325

text: Homo sapiens

text: FIN

text: male

text: Coriell HG00325


text: NCBI

text: live

text: Generic

text: Finnish in Finland

text: EUR

characteristic: Super Population Code

text: European

characteristic: Super Population Description

characteristic: culture collection

text: Human 1000 genomes individual HG00326

text: Homo sapiens

text: FIN

characteristic: population

text: female

text: Coriell HG00326


text: NCBI

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Finnish in Finland

text: EUR

text: European

text: Human 1000 genomes individual HG00329

text: Homo sapiens

text: FIN

text: male

text: Coriell HG00329


text: NCBI

text: live

text: Generic

text: Finnish in Finland

characteristic: SRA accession

text: EUR

text: European

text: Human 1000 genomes individual HG00330

characteristic: description

text: Homo sapiens

characteristic: organism

text: FIN

text: female

text: Coriell HG00330

characteristic: title


characteristic: Coriell panel

characteristic: DNA id

text: NCBI

text: live

text: Generic

text: Finnish in Finland

characteristic: Population Description

text: EUR

text: European

text: Human 1000 genomes individual HG00331

text: Homo sapiens

text: FIN

text: female

characteristic: sex

text: Coriell HG00331


characteristic: External Id

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Finnish in Finland

text: EUR

text: European

text: Human 1000 genomes individual HG00332

text: Homo sapiens

text: FIN

text: female

text: Coriell HG00332


text: NCBI

text: live

text: Generic

text: Finnish in Finland

text: EUR

characteristic: Super Population Code

text: European

characteristic: Super Population Description

characteristic: culture collection

text: Human 1000 genomes individual HG00334

text: Homo sapiens

text: FIN

characteristic: population

text: female

text: Coriell HG00334


text: NCBI

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Finnish in Finland

text: EUR

text: European

text: Human 1000 genomes individual HG00341

text: Homo sapiens

text: FIN

text: male

text: Coriell HG00341


text: NCBI

text: live

text: Generic

text: Finnish in Finland

characteristic: SRA accession

text: EUR

text: European

text: Human 1000 genomes individual HG00383

characteristic: description

text: Homo sapiens

characteristic: organism

text: FIN

text: female

text: Coriell HG00383

characteristic: title


characteristic: Coriell panel

characteristic: DNA id

characteristic: Family ID

text: NCBI

text: live

text: Generic

text: Puerto Rican in Puerto Rico

characteristic: Population Description

text: mother

characteristic: Relationship

text: AMR

text: Ad Mixed American

text: Human 1000 genomes individual HG00551

text: Homo sapiens

text: PUR

text: female

characteristic: sex

text: Coriell HG00551


characteristic: External Id

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: child

text: Human 1000 genomes individual HG00552

text: Homo sapiens

text: PUR

text: male

text: Human 1000 genomes individual HG00552


text: NCBI

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Puerto Rican in Puerto Rico

text: father

text: AMR

characteristic: Super Population Code

text: Ad Mixed American

characteristic: Super Population Description

characteristic: culture collection

text: Human 1000 genomes individual HG01051

text: Homo sapiens

text: PUR

characteristic: population

text: male

text: Coriell HG01051


text: NCBI

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Puerto Rican in Puerto Rico

text: mother

characteristic: SRA accession

text: AMR

text: Ad Mixed American

text: Human 1000 genomes individual HG01052

characteristic: description

text: Homo sapiens

characteristic: organism

text: PUR

text: female

text: Coriell HG01052

characteristic: title


characteristic: Family ID

text: NCBI

text: live

text: Generic

text: child

characteristic: Relationship

text: Human 1000 genomes individual HG01053

text: Homo sapiens

text: PUR

text: female

characteristic: sex

text: Human 1000 genomes individual HG01053


characteristic: Coriell panel

characteristic: DNA id

characteristic: External Id

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Puerto Rican in Puerto Rico

characteristic: Population Description

text: father

text: AMR

text: Ad Mixed American

text: Human 1000 genomes individual HG01060

text: Homo sapiens

text: PUR

text: male

text: Coriell HG01060


text: NCBI

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Puerto Rican in Puerto Rico

text: mother

text: AMR

characteristic: Super Population Code

text: Ad Mixed American

characteristic: Super Population Description

characteristic: culture collection

text: Human 1000 genomes individual HG01061

text: Homo sapiens

text: PUR

text: female

text: Coriell HG01061


text: NCBI

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: child

characteristic: SRA accession

text: Human 1000 genomes individual HG01062

characteristic: description

text: Homo sapiens

characteristic: organism

text: PUR

characteristic: population

text: female

text: Human 1000 genomes individual HG01062


characteristic: Coriell panel

characteristic: DNA id

characteristic: Family ID

text: NCBI

text: live

text: Generic

text: Puerto Rican in Puerto Rico

text: father

characteristic: Relationship

text: AMR

text: Ad Mixed American

text: Human 1000 genomes individual HG01069

text: Homo sapiens

text: PUR

text: male

characteristic: sex

text: Coriell HG01069

characteristic: title


characteristic: External Id

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Puerto Rican in Puerto Rico

characteristic: Population Description

text: mother

text: AMR

text: Ad Mixed American

text: Human 1000 genomes individual HG01070

text: Homo sapiens

text: PUR

text: female

text: Coriell HG01070


text: NCBI

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: child

text: Human 1000 genomes individual HG01071

text: Homo sapiens

text: PUR

text: female

text: Human 1000 genomes individual HG01071


text: NCBI

text: live

text: Generic

text: Puerto Rican in Puerto Rico

text: father

characteristic: SRA accession

text: AMR

characteristic: Super Population Code

text: Ad Mixed American

characteristic: Super Population Description

characteristic: culture collection

text: Human 1000 genomes individual HG01072

characteristic: description

text: Homo sapiens

characteristic: organism

text: PUR

text: male

text: Coriell HG01072


characteristic: Coriell panel

characteristic: DNA id

characteristic: Family ID

text: NCBI

text: live

text: Generic

text: Puerto Rican in Puerto Rico

text: mother

characteristic: Relationship

text: AMR

text: Ad Mixed American

text: Human 1000 genomes individual HG01073

text: Homo sapiens

text: PUR

characteristic: population

text: female

characteristic: sex

text: Coriell HG01073


characteristic: External Id

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: child

text: Human 1000 genomes individual HG01074

text: Homo sapiens

text: PUR

text: male

text: Human 1000 genomes individual HG01074

characteristic: title


text: NCBI

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Puerto Rican in Puerto Rico

characteristic: Population Description

text: father

characteristic: SRA accession

text: AMR

characteristic: Super Population Code

text: Ad Mixed American

text: Human 1000 genomes individual HG01075

text: Homo sapiens

text: PUR

text: male

text: Coriell HG01075


characteristic: Coriell panel

characteristic: DNA id

text: NCBI

text: live

text: Generic

text: Puerto Rican in Puerto Rico

text: father

text: AMR

text: Ad Mixed American

characteristic: Super Population Description

characteristic: culture collection

text: Human 1000 genomes individual HG01082

characteristic: description

text: Homo sapiens

characteristic: organism

text: PUR

text: male

text: Coriell HG01082


characteristic: External Id

characteristic: Family ID

text: NCBI

characteristic: INSDC center name

text: live

text: Generic

text: Puerto Rican in Puerto Rico

text: mother

characteristic: Relationship

text: AMR

text: Ad Mixed American

text: Human 1000 genomes individual HG01083

text: Homo sapiens

text: PUR

characteristic: population

text: female

characteristic: sex

text: Coriell HG01083


text: NCBI

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: child

text: Human 1000 genomes individual HG01084

text: Homo sapiens

text: PUR

text: female

text: Human 1000 genomes individual HG01084

characteristic: title


characteristic: Coriell panel

characteristic: DNA id

text: NCBI

text: live

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