text: Baylor College of Medicine

text: live

text: MIGS.ba

text: Newbler 1.1.03.24

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

characteristic: culture-collection

text: Serratia odorifera strain DSM 4582

characteristic: estimated size

characteristic: feature

text: Level 5: Non-contiguous Finished21.51x;91

characteristic: finishing strategy (depth of coverage)

text: not determined

characteristic: geo loc name

characteristic: host taxid

text: not determined

text: not determined

characteristic: lat lon

text: biological product [ENVO:02000043]

characteristic: material

text: Respiratory tract

characteristic: misc_param: HMP body site

text: airways

text: not determined

text: not determined

text: Serratia odorifera DSM 4582

text: Serratia odorifera DSM 4582

text: Reference Genome

text: not determined

text: 454, Sanger

characteristic: sequencing method

characteristic: sop

text: DSM 4582, ATCC 33077, CIP 79.01, ICPB 3995, NCTC 11214

text: Homo sapiens

characteristic: specific host

text: DSM 4582

text: MIGS Cultured Bacterial/Archaeal sample from Serratia odorifera DSM 4582


TRBC

status: PUBLIC

characteristic: External Id

text: University of Wisconsin-Milwaukee

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Rainbow trout erythrocyte cultures (n=8) were plated and either stimulated or not (control) with poly (I:C) 50 ug/ml for 12 h. The total RNA was then isolated from the plated cells and converted to mRNA and used in the SOLiD Whole Transcriptome Analysis Kit (Applied Biosystems).

characteristic: description

text: Oncorhynchus mykiss

characteristic: organism

text: Nucleated erythrocytes can play more than one tune

characteristic: title


text: Baylor College of Medicine

text: live

text: MIGS.ba

text: Newbler v. 2.0.0-Eclipse

tag: attribute

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

characteristic: culture-collection

text: Pasteurella dagmatis strain ATCC 43325

characteristic: estimated size

text: Homo sapiens-associated habitat [ENVO:00009003]

characteristic: feature

text: Level 3: Improved-High-Quality Draft29.13x;29

characteristic: finishing strategy (depth of coverage)

text: not determined

characteristic: geo loc name

characteristic: host taxid

text: not determined

text: not determined

characteristic: lat lon

text: biological product [ENVO:02000043]

characteristic: material

text: Nasal

text: airways

characteristic: misc_param: HMP supersite

text: not determined

characteristic: nucleic acid extraction

text: not determined

text: Pasteurella dagmatis ATCC 43325

text: Pasteurella dagmatis ATCC 43325

characteristic: project name

text: Reference Genome

text: not determined

text: ATCC 43325, NCTC 11617

text: Homo sapiens

text: ATCC 43325

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Pasteurella dagmatis ATCC 43325


characteristic: External Id

text: Joint Genome Institute, U.S. Department of Energy

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: description

text: Mucor lusitanicus CBS 277.49

characteristic: organism

text: CBS 277.49

text: Generic sample from Mucor circinelloides f. lusitanicus CBS 277.49


text: Baylor College of Medicine

text: live

text: MIGS.ba

text: Newbler v. 1.1.03.24

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

characteristic: culture-collection

text: Streptococcus oralis strain ATCC 35037

characteristic: estimated size

characteristic: feature

text: Level 3: Improved-High-Quality Draft38.2x;28

characteristic: finishing strategy (depth of coverage)

text: not determined

characteristic: geo loc name

characteristic: host taxid

text: not determined

text: not determined

characteristic: lat lon

text: biological product [ENVO:02000043]

text: Mouth

characteristic: misc_param: HMP body site

text: oral

text: not determined

text: not determined

text: Streptococcus oralis ATCC 35037

text: Streptococcus oralis SK23, ATCC 35037

text: Reference Genome

text: not determined

text: 454, Sanger

characteristic: sequencing method

characteristic: sop

text: ATCC 35037, NCTC 11427

text: Homo sapiens

characteristic: specific host

text: ATCC 35037

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus oralis ATCC 35037

characteristic: title


characteristic: External Id

text: Baylor College of Medicine

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Newbler v. 2.0.0-Eclipse

text: terrestrial biome [ENVO:00000446]

text: not determined

text: Klebsiella pneumoniae subsp. rhinoscleromatis strain ATCC 13884

characteristic: description

text: Level 2: High-Quality Draft19.77x;268

text: not determined

text: not determined

text: not determined

text: biological product [ENVO:02000043]

characteristic: material

text: Nasal

text: airways

characteristic: misc_param: HMP supersite

text: not determined

characteristic: nucleic acid extraction

text: not determined

text: Klebsiella pneumoniae rhinoscleromatis ATCC 13884

characteristic: project name

text: Reference Genome

text: not determined

text: ATCC 13884, NCTC 5046

text: Homo sapiens

text: ATCC 13884

characteristic: strain

text: rhinoscleromatis

characteristic: sub species

text: MIGS Cultured Bacterial/Archaeal sample from Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884


text: Baylor College of Medicine

text: live

text: MIGS.ba

text: Newbler v. 2.0-01162009

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

text: Rothia dentocariosa strain ATCC 17931

characteristic: estimated size

characteristic: feature

text: Level 6: Finished34.7x

characteristic: finishing strategy (depth of coverage)

text: not determined

characteristic: geo loc name

characteristic: host taxid

text: not determined

text: not determined

characteristic: lat lon

text: biological product [ENVO:02000043]

text: Teeth

characteristic: misc_param: HMP body site

text: oral

text: not determined

text: not determined

text: Rothia dentocariosa ATCC 17931

characteristic: organism

text: Rothia dentocariosa ATCC 17931

text: Reference Genome

text: not determined

characteristic: sequencing method

characteristic: sop

text: ATCC 17931, CDC X599

text: Homo sapiens

characteristic: specific host

text: ATCC 17931

text: MIGS Cultured Bacterial/Archaeal sample from Rothia dentocariosa

characteristic: title


characteristic: External Id

text: Baylor College of Medicine

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Newbler v. 2.0.0-Eclipse

text: terrestrial biome [ENVO:00000446]

text: not determined

characteristic: culture-collection

text: Anaerococcus vaginalis strain ATCC 51170

characteristic: description

text: Level 2: High-Quality Draft35x;28

text: not determined

text: not determined

text: not determined

text: biological product [ENVO:02000043]

characteristic: material

text: not determined

text: skin

characteristic: misc_param: HMP supersite

text: not determined

characteristic: nucleic acid extraction

text: not determined

text: Anaerococcus vaginalis ATCC 51170

text: Anaerococcus vaginalis ATCC 51170

characteristic: project name

text: Reference Genome

text: not determined

text: ATCC 51170

text: Homo sapiens

text: ATCC 51170

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Anaerococcus vaginalis ATCC 51170


text: Baylor College of Medicine

text: live

text: MIGS.ba

text: Newbler v. 2.0.0-Eclipse

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

text: Cardiobacterium hominis strain ATCC 15826

characteristic: estimated size

characteristic: feature

text: Level 2: High-Quality Draft27.48x;142

characteristic: finishing strategy (depth of coverage)

text: not determined

characteristic: geo loc name

characteristic: host taxid

text: not determined

text: not determined

characteristic: lat lon

text: biological product [ENVO:02000043]

text: Blood

characteristic: misc_param: HMP body site

text: other

text: not determined

text: not determined

text: Cardiobacterium hominis ATCC 15826

characteristic: organism

text: Cardiobacterium hominis ATCC 15826

text: Reference Genome

text: not determined

text: 454-GS-FLX, Sanger

characteristic: sequencing method

characteristic: sop

text: ATCC 15826, NCTC 10426

text: Homo sapiens

characteristic: specific host

text: ATCC 15826

text: MIGS Cultured Bacterial/Archaeal sample from Cardiobacterium hominis ATCC 15826

characteristic: title


characteristic: External Id

text: University of Oregon

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: single rainbow trout (Oncorhynchus mykiss) individual from Abbot Creek, MT

characteristic: description

text: Oncorhynchus mykiss

text: Generic sample from Oncorhynchus mykiss


text: University of Oregon

text: live

text: Generic

text: single westslope cutthroat trout (Oncorhynchus clarki lewisii) from S Fork Jocko River, MT

text: Oncorhynchus clarkii lewisi

text: Generic sample from Oncorhynchus clarkii lewisi


text: University of Oregon

text: live

text: Generic

text: single rainbow trout (Oncorhynchus mykiss) individual from Arlee Fish Hatchery, MT

text: Oncorhynchus mykiss

text: Generic sample from Oncorhynchus mykiss


text: University of Oregon

text: live

text: Generic

text: single westslope cutthroat trout (Oncorhynchus clarki lewisii) from Bear Creek, MT

text: Oncorhynchus clarkii lewisi


text: University of Oregon

text: live

text: Generic

text: single westslope cutthroat trout (Oncorhynchus clarki lewisii) from Copper Creek, MT

text: Oncorhynchus clarkii lewisi


text: University of Oregon

text: live

text: Generic

text: single westslope cutthroat trout (Oncorhynchus clarki lewisii) from Danaher Creek, MT

text: Oncorhynchus clarkii lewisi


text: University of Oregon

text: live

text: Generic

text: single westslope cutthroat trout (Oncorhynchus clarki lewisii) from Hawk Creek, MT

text: Oncorhynchus clarkii lewisi


text: University of Oregon

text: live

text: Generic

text: single westslope cutthroat trout (Oncorhynchus clarki lewisii) from McClellan Creek, MT

text: Oncorhynchus clarkii lewisi


text: University of Oregon

text: live

text: Generic

text: single westslope cutthroat trout (Oncorhynchus clarki lewisii) from McGinnis Creek, MT

text: Oncorhynchus clarkii lewisi


text: University of Oregon

text: live

text: Generic

text: single westslope cutthroat trout (Oncorhynchus clarki lewisii) from McVey Creek, MT

text: Oncorhynchus clarkii lewisi


text: University of Oregon

text: live

text: Generic

text: single rainbow trout (Oncorhynchus mykiss) individual from Jocko River, MT

text: Oncorhynchus mykiss

text: Generic sample from Oncorhynchus mykiss


text: University of Oregon

text: live

text: Generic

text: single westslope cutthroat trout (Oncorhynchus clarki lewisii) from Runt Creek, MT

text: Oncorhynchus clarkii lewisi


text: University of Oregon

text: live

text: Generic

text: single rainbow trout (Oncorhynchus mykiss) individual from Jocko Spring Creek, MT

text: Oncorhynchus mykiss

text: Generic sample from Oncorhynchus mykiss


text: University of Oregon

text: live

text: Generic

text: single rainbow trout (Oncorhynchus mykiss) individual from Lower Valley Creek, MT

text: Oncorhynchus mykiss

text: Generic sample from Oncorhynchus mykiss


text: University of Oregon

text: live

text: Generic

text: single redband trout (Onchorhynchus mykiss gairdneri) from Yahk River, BC

text: Oncorhynchus mykiss gairdneri

text: Generic sample from Oncorhynchus mykiss gairdneri


text: NHLBI, NIH

text: live

text: Generic

text: Schizosaccharomyces pombe


Dmel Head Transcriptome Female Biorep 1

text: University of Southern California

text: live

text: Generic

text: wild type Berlin

text: Drosophila melanogaster

text: Dmel Head Transcriptome Female Biorep 1


Dmel Head Transcriptome Female Biorep 2

text: University of Southern California

text: live

text: Generic

text: wild type Berlin

text: Drosophila melanogaster

text: Dmel Head Transcriptome Female Biorep 2


Dmel Head Transcriptome Female Biorep 3

text: University of Southern California

text: live

text: Generic

text: wild type Berlin

text: Drosophila melanogaster

text: Dmel Head Transcriptome Female Biorep 3


Dmel Head Transcriptome Male Biorep 1

text: University of Southern California

text: live

text: Generic

text: wild type Berlin

text: Drosophila melanogaster

text: Dmel Head Transcriptome Male Biorep 1


Dmel Head Transcriptome Male Biorep 2

text: University of Southern California

text: live

text: Generic

text: wild type Berlin

text: Drosophila melanogaster

text: Dmel Head Transcriptome Male Biorep 2


Dmel Head Transcriptome Male Biorep 3

text: University of Southern California

text: live

text: Generic

text: wild type Berlin

text: Drosophila melanogaster

text: Dmel Head Transcriptome Male Biorep 3


name: Dmel Head Transcriptome tra pseudomale Biorep 1

text: University of Southern California

text: live

text: Generic

text: Chromosomally XX, tra pseudomales with genotype y,w, P[w cM,ubi-gfp]/w; tra1/ Df(3L)st-j7

text: Drosophila melanogaster


name: Dmel Head Transcriptome tra pseudomale Biorep 2

text: University of Southern California

text: live

text: Generic

text: Drosophila melanogaster


name: Dmel Head Transcriptome tra pseudomale Biorep 3

text: University of Southern California

text: live

text: Generic

text: Drosophila melanogaster


Winged aphid 7-2-1

text: University of Nebraska-Lincoln

text: live

text: Generic

text: Acyrthosiphon pisum

text: Winged aphid 7-2-1


Unwinged aphid 7-2-1

text: University of Nebraska-Lincoln

text: live

text: Generic

text: Acyrthosiphon pisum

text: Unwinged aphid 7-2-1


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Rhodotorula graminis WP1

text: Rhodotorula graminis WP1

characteristic: strain

text: Generic sample from Rhodotorula graminis WP1


mES, WCE, chip-seq, rep1

text: nci

text: live

text: Generic

text: Whole cell extract of mouse embryonic stem cells (R1E) without adriamycin treatment, ChIP-seq, rep1, sample name JH01, ,

text: Mus musculus

text: ChIP-seq, R1E, Ctr, WCE


text: University of Melbourne

text: live

text: Generic

text: Mycobacterium ulcerans


text: University of Melbourne

text: live

text: Generic

text: Mycobacterium ulcerans

text: Mu_06-3845 whole genome shotgun


text: University of Melbourne

text: live

text: Generic

text: Mycobacterium ulcerans

text: Mu_06-3846 whole genome shotgun


text: University of Melbourne

text: live

text: Generic

text: Mycobacterium ulcerans

text: Mu_07-1082 whole genome shotgun


text: INRA

text: live

text: Generic

text: Pinus pinaster

text: Analysis of Expressed sequence tag in maritime pine (Pinus pinaster Ait.)


Resistant line rohu

text: Nofima Marin

text: live

text: Generic

text: Labeo rohita

text: Rohu


text: Baylor College of Medicine

text: live

text: Generic

text: Homo sapiens

text: HapMap sampels NA12812


text: Baylor College of Medicine

text: live

text: Generic

text: Homo sapiens

text: Sample L721


text: Baylor College of Medicine

text: live

text: Generic

text: Homo sapiens

text: Sample L722


text: Baylor College of Medicine

text: live

text: Generic

text: Homo sapiens

text: Sample C45


text: Baylor College of Medicine

text: live

text: Generic

text: Homo sapiens

text: Sample C6


text: NCBI - Transcript Shotgun Assembly

text: live

text: Generic

text: Bobwhite

characteristic: cultivar

text: 12 days post anthesis

characteristic: dev stage

text: Triticum aestivum

text: flag leaf

characteristic: tissue

text: Triticum aestivum reference transcriptome


Pigeon Pea ICPL 87119 (Asha)

text: CSHL

text: live

text: Generic

text: Cajanus cajan

characteristic: organism

text: Pigeon pea whole genome sequencing


susceptible line rohu

text: Nofima Marin

text: live

text: Generic

text: susceptible to Aeromonas hydrophila, an important bacterial pathogen causing aeromoniasis in rohu

text: Labeo rohita

text: Rohu susceptible to aeromoniasis


text: live

text: Generic

text: Ceriporiopsis subvermispora B

text: Gelatoporia subvermispora B

text: B

text: Generic sample from Ceriporiopsis subvermispora B


default Oncorhynchus mykiss

text: University of Oregon

text: live

text: Generic

text: default rainbow and westslope cutthroat trout

text: Oncorhynchus mykiss

text: Generic sample from Oncorhynchus mykiss


text: Texas State University

text: live

text: Generic

text: Adult Male Xiphophorus maculatus Jp 163 A

text: Xiphophorus maculatus

text: Transcriptome analysis of female and male Xiphophorus maculatus Jp 163 A


text: NCBI-Whole Genome Shotgun Submissions

text: live

text: Generic

text: DNA from four males : brothers of Pb1(SRS120842)

text: Pogonomyrmex barbatus

text: Pogonomyrmex barbatus


Agrobacterium PDO1-076

text: Oak Ridge National Laboratory

text: live

text: Generic

text: Agrobacterium

text: Agrobacterium PDO1-076


Anguilla anguilla 18 individuals sample

text: University of Padua

text: live

text: Generic

text: Recruiting glass eel (juvenile) samples were collected in early 2007 at three separate geographic locations across Europe, one in the Atlantic Ocean: (1) the estuary of the river Vilaine (47*29'N; 2*28'W) in Brittany/North-West France; and two in the Tyrrhenian Sea/Mediterranean Sea: (2) the estuary of the river Tiber (41*46'N; 12*14'E); and (3) the estuary of the river Sele (40*48'N; 14*93'E). Individuals were sacrificed immediately after collection from the field following internationally recognized guidelines. Samples were stored in RNALater (Ambion) at -20*C prior extraction. No analyses or experiments were conducted with live animals.

text: Anguilla anguilla

text: Anguilla anguilla 18 individuals sample


Pooled midgut samples

text: Purdue University

text: live

text: Generic

text: Coreidae

text: Pooled midgut samples from Clavigrall tomentosicollis actively feeding on cowpea pods in Niger


text: J. Craig Venter Institute

text: live

text: MIGS.ba

text: Newbler v. 2.3

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

text: 454 Titanium 3kb

text: not determined

characteristic: estimated size

text: human-associated habitat [ENVO:00009003]

characteristic: feature

text: Level 2: High-Quality Draft31x

characteristic: finishing strategy (depth of coverage)

text: not determined

characteristic: geo loc name

characteristic: host taxid

text: not determined

text: not determined

characteristic: lat lon

text: biological product [ENVO:02000043]

characteristic: material

text: Vaginal

characteristic: misc_param: HMP body site

characteristic: misc_param: HMP supersite

text: not determined

characteristic: nucleic acid extraction

text: not determined

text: Anaerococcus prevotii ACS-065-V-Col13

text: Anaerococcus prevotii ACS-065-V-Col13

characteristic: project name

text: Reference Genome

text: not determined

characteristic: sequencing method

characteristic: sop

text: CCUG 59475

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Anaerococcus prevotii ACS-065-V-Col13


characteristic: External Id

text: J. Craig Venter Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Newbler v2.3

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

text: not determined

text: 454 Titanium 3kb

characteristic: description

text: Level 2: High-Quality Draft39x;23

text: not determined

text: not determined

text: not determined

text: biological product [ENVO:02000043]

text: Vaginal

text: not determined

text: not determined

text: Veillonella parvula ACS-068-V-Sch12

characteristic: organism

text: Veillonella parvula ACS-068-V-Sch12

text: Reference Genome

text: not determined

text: CCUG 59474

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Veillonella parvula ACS-068-V-Sch12

characteristic: title


text: J. Craig Venter Institute

text: live

text: MIGS.ba

text: Newbler v. 2.3

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

text: 454 Titanium 3kb

characteristic: estimated size

characteristic: feature

text: Level 2: High-Quality Draft20x

characteristic: finishing strategy (depth of coverage)

text: not determined

characteristic: geo loc name

characteristic: host taxid

text: not determined

text: not determined

characteristic: lat lon

text: biological product [ENVO:02000043]

characteristic: material

text: Vaginal

characteristic: misc_param: HMP body site

characteristic: misc_param: HMP supersite

text: not determined

characteristic: nucleic acid extraction

text: not determined

characteristic: project name

text: Reference Genome

text: not determined

characteristic: sequencing method

text: CCUG 59477

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Anaerococcus hydrogenalis ACS-025-V-Sch4


characteristic: External Id

text: J. Craig Venter Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Newbler v. 2.3

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

text: not determined

text: 454 Titanium 3kb

characteristic: description

text: Level 2: High-Quality Draft30x;13

text: not determined

text: not determined

text: not determined

text: biological product [ENVO:02000043]

text: Vaginal

text: not determined

text: not determined

text: Gardnerella vaginalis 315-A

characteristic: organism

text: Gardnerella vaginalis 315-A

text: Reference Genome

text: not determined

characteristic: sop

text: BEI HM-133

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Gardnerella vaginalis 315-A


text: J. Craig Venter Institute

text: live

text: MIGS.ba

text: not determined

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

text: 454 Titanium 3kb

characteristic: estimated size

characteristic: feature

text: Level 2: High-Quality Draft21

characteristic: finishing strategy (depth of coverage)

text: not determined

characteristic: geo loc name

characteristic: host taxid

text: not determined

text: not determined

characteristic: lat lon

text: biological product [ENVO:02000043]

characteristic: material

text: Vaginal

characteristic: misc_param: HMP body site

characteristic: misc_param: HMP supersite

text: not determined

characteristic: nucleic acid extraction

text: not determined

text: Lactobacillus iners UPII 143-D

text: Lactobacillus iners UPII 143-D

text: Reference Genome

text: not determined

text: BEI HM-126

text: Homo sapiens

text: UPII 143-D

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Lactobacillus iners UPII 143-D

characteristic: title


characteristic: External Id

text: J. Craig Venter Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: not determined

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

text: not determined

text: 454 Titanium 3kb

characteristic: description

text: Level 2: High-Quality Draft31

text: not determined

text: not determined

text: not determined

text: biological product [ENVO:02000043]

text: Vaginal

text: not determined

text: not determined

text: Lactobacillus iners UPII 60-B

characteristic: organism

text: Lactobacillus iners UPII 60-B

characteristic: project name

text: Reference Genome

text: not determined

characteristic: sequencing method

text: BEI HM-131

text: Homo sapiens

text: UPII 60-B

text: MIGS Cultured Bacterial/Archaeal sample from Lactobacillus iners UPII 60-B


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Akkermansia muciniphila ATCC BAA-835

text: Akkermansia muciniphila ATCC BAA-835

text: ATCC BAA-835

text: Generic sample from Akkermansia muciniphila ATCC BAA-835


Tria jack pine cDNA

text: University of Alberta, Edmonton, Canada

text: live

text: Generic

text: One-year-old jack pine seedlings from north-western Ontario were supplied by PRT nurseries. Seedlings were transplanted into 3.78 L pots containing sunshine mix #4 (Sun Gro Horticulture Canada), and were subject to treatment during their second growth cycle. The plants were watered every two to three days in a growth chamber under the following conditions: 20 *C, 20-25 % humidity, 0.5 g/L fertilizer (20-20-20) twice per week, and full-spectrum fluorescent lighting lamps for 16 h light / 8 h dark cycle. At the onset of the experiment, trees were either (1) exposed to water deficit conditions by withholding water for 2 weeks prior to harvest, or (2) wounded by incising the bark with a razor blade every 5 mm along the stem along two opposite sides, and harvesting 1, 2, 4, or 8 days following the wound treatment. Needles, whole stems, and roots were rapidly harvested. A total of 10 seedlings (1-2 replicates per treatment) were harvested, and each replicate is assumed to be a distinct genotype. Harvested tissues were frozen in liquid nitrogen immediately following collection and stored at -80 *C until RNA extraction.

text: Pinus banksiana

text: Jack pine


Tria lodgepole pine cDNA

text: University of Alberta, Edmonton, Canada

text: live

text: Generic

text: One-year-old lodgepole pine seedlings were supplied by the government of British Columbia representing five seed-zones (Central Plateau, Prince George, Thompson Okanagan, Bulkley Valley and Nelson) in February 2010. Seedlings were transplanted into 3.78 L pots containing sunshine mix #4 (Sun Gro Horticulture Canada), and were subject to treatment during their second growth cycle. The plants were watered every two to three days in a growth chamber under the following conditions: 20 °C, 20-25 % humidity, 0.5 g/L fertilizer (20-20-20) twice per week, and full-spectrum fluorescent lighting lamps for 16 h light / 8 h dark cycle.. At the onset of the experiment, trees were either (1) exposed to water deficit conditions by withholding water for 2 weeks prior to harvest, or (2) wounded by incising the bark with a razor blade every 5 mm along the stem along two opposite sides, and harvesting 1, 2, 4, or 8 days following the wound treatment. Needles, whole stems, and roots were rapidly harvested. A total of 11 seedlings (1-2 replicates per treatment) were harvested, and each replicate is assumed to be a distinct genotype. Harvested tissues were frozen in liquid nitrogen immediately following collection and stored at -80 °C until RNA extraction.

text: Pinus contorta

text: Lodgepole pine


pea aphid LSR1

text: Cornell University

text: live

text: Generic

text: Aphids were maintained in pre-flowering Vicia faba (cv windsor) plants in a growth chamber at 20 degree C with L:D=16:8.

text: Acyrthosiphon pisum

text: pea aphid LSR1, 7-day-old larvae


name: 1127302211194 Staphylococcus aureus CO-23 CO23-RLB-RL016-01-640 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus aureus CO-23

text: Generic sample from Staphylococcus aureus subsp. aureus CO-23


name: 1127219005017 Staphylococcus aureus CO-32 CO32-RLB-RL018-01-646 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus aureus CO-32

text: Generic sample from Staphylococcus aureus subsp. aureus CO-32


name: 1127302211013 Staphylococcus aureus AA-27 AA27-RLB-RL013-01-709 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus aureus AA-27

text: Generic sample from Staphylococcus aureus subsp. aureus AA-27


name: 1127326944013 Staphylococcus aureus CO-06 CO06-RLB-RL014-01-761 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus aureus CO-06

text: Generic sample from Staphylococcus aureus subsp. aureus CO-06


name: 1127244925087 Staphylococcus aureus CO-08 CO08-RLB-RL015-01-749 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus aureus CO-08

text: Generic sample from Staphylococcus aureus subsp. aureus CO-08


text: J. Craig Venter Institute

text: live

text: IRQ

text: Generic

text: Total DNA isolated from Staphylococcus aureus IS-125

text: Staphylococcus

characteristic: genus

characteristic: isolate

text: Wound

text: skin or soft tissue

text: Generic sample from Staphylococcus aureus subsp. aureus IS-125

type: AMR curated data - CABBAGE

value: erythromycin

value: CLSI

value: resistant

value: Staphylococcus aureus

value: chloramphenicol

value: susceptible

value: gentamicin

value: rifampin

value: cephalothin

value: amoxicillin-clavulanic acid

value: trimethoprim-sulfamethoxazole

value: ampicillin

value: vancomycin

value: clindamycin

value: tetracycline

value: ciprofloxacin

value: ofloxacin

value: oxacillin


text: J. Craig Venter Institute

text: live

text: IRQ

text: Generic

text: Total DNA isolated from Staphylococcus aureus IS-189

text: Staphylococcus

text: Respiratory

text: respiratory tract

characteristic: strain

text: Generic sample from Staphylococcus aureus subsp. aureus IS-189

characteristic: title

value: erythromycin

value: CLSI


characteristic: External Id

text: J. Craig Venter Institute

characteristic: INSDC center name

text: live

text: Generic

text: Total DNA isolated from Staphylococcus aureus IS-195

text: Generic sample from Staphylococcus aureus subsp. aureus IS-195


name: 1127276846295 Staphylococcus aureus IS-24 1524-RLB-RL028-01-647 Sample

text: J. Craig Venter Institute

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Total DNA isolated from Staphylococcus aureus IS-24

text: Generic sample from Staphylococcus aureus subsp. aureus IS-24


name: 1127572684015 Staphylococcus epidermidis VCU006 VCU006-BP3KB-A5NB-01-561 Sample

text: J. Craig Venter Institute

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Total DNA isolated from Staphylococcus epidermidis VCU006

text: Staphylococcus

text: NVE

text: Generic sample from Staphylococcus aureus subsp. aureus VCU006

value: methicillin

value: resistant

value: Staphylococcus aureus


name: Staphylococcus aureus VCU006 VCU006-BP3KB-A5NB-01-561 Sample

text: J. Craig Venter Institute

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Total DNA isolated from Staphylococcus aureus VCU006

text: Staphylococcus epidermidis VCU036

text: Sequencing of Staphylococcus aureus VCU006


Vibrio cholerae 2010EL-1786

text: Centers for Disease Control

text: live

text: Generic

characteristic: SRA accession

characteristic: collection date

text: Haiti

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: Pathogen

characteristic: keywords

text: Vibrio cholerae O1 str. 2010EL-1786

characteristic: serovar

text: Vibrio cholerae 2010EL-1786


Lemna gibba 131

text: CSHL

text: live

text: Generic

text: Illumina whole genome sequencing for Lemna gibba 131

characteristic: description

text: Lemna gibba

characteristic: organism

text: Lemna gibba whole genome sequencing


Big broccoli A

text: CSHL

text: live

text: Generic

text: Illumina whole genome sequencing of broccoli A

text: Brassica oleracea var. italica

text: Whole genome sequencing of broccoli

characteristic: title

text: italica

characteristic: variety


0hr embryos

characteristic: External Id

text: University of Nebraska-Lincoln

characteristic: INSDC center name

text: live

text: Generic

text: Embryos dissected from CR29-8 pea aphid, no treatment.

text: Acyrthosiphon pisum

text: 0 hr embryos


12hr crowded, heads

text: University of Nebraska-Lincoln

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Heads from female pea aphids crowded for 12 hours.

text: Acyrthosiphon pisum

text: 12hr crowded, heads


0hr heads

text: University of Nebraska-Lincoln

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Heads from pea aphid females, no treatment.

text: Acyrthosiphon pisum

text: 0hr heads


12hr heads, solitary

text: University of Nebraska-Lincoln

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Heads from female pea aphids, solitary treatment, 12 hour timepoint.

text: Acyrthosiphon pisum

text: 12hr heads, solitary


text: Texas State University

text: live

text: Generic

characteristic: SRA accession

text: Adult Female Xiphophorus maculatus Jp 163 A

text: Xiphophorus maculatus

text: Transcriptome analysis of female and male Xiphophorus maculatus Jp 163 A


Terrace

text: University of Alberta

text: live

text: Generic

text: This sample was generated by pooling approximate equal amounts of gDNA from 10 adult mountain pine beetles (MPB) from Terrace, British Columbia. The DNA of each beetle was extracted individually using CTAB-chloroform extraction method.

text: Dendroctonus ponderosae

text: D. ponderosae genomic DNA - Terrace, BC


Fairview

text: University of Alberta

text: live

text: Generic

text: This sample was generated by pooling approximate equal amounts of gDNA from 10 adult mountain pine beetles (MPB) from Fairview, Alberta. The DNA from each beetle was extracted individually using CTAB-chloroform extraction method.

text: Dendroctonus ponderosae

text: D. ponderosae genomic DNA - Fairview, AB


Whitecourt

text: University of Alberta

text: live

text: Generic

text: This sample was generated by pooling approximate equal amounts of gDNA from 13 lab-reared adult mountain pine beetles (MPB) from Whitecourt, Alberta. Individual beetle was collected in a 2mL tube, flash-frozen in Liquid Nitrogen and stored at -80C until extraction. The DNA from each beetle was extracted individually using CTAB-chloroform extraction method.

text: Dendroctonus ponderosae

text: D. ponderosae genomic DNA - Whitecourt, AB


DH2150 leaf and shoot cDNA

text: Plant and Food Research

text: live

text: Generic

text: Normalised cDNA prepared from total leaf and shoot tissues of Cornell Doubled Haploid onion 'CUDH2150' at the 5-6 leaf stage of development

text: Allium cepa

text: CUDH2150 leaf and shoot cDNA


Nasik Red leaf and shoot cDNA

text: Plant and Food Research

text: live

text: Generic

text: Normalised cDNA prepared from total leaf and shoot tissues of USDAARS PI 271311 at the 5-6 leaf stage of development

text: Allium cepa

text: Nasik Red leaf and shoot cDNA


PaTnMutantPool

text: University of Washington

text: live

text: Generic

text: Pseudomonas aeruginosa PAO1

characteristic: strain

text: Pseudomonas aeruginosa 100,000-member transposon mutant pool


name: Pea aphid, parthenogenetic female, whole body

text: National Institute for Basic Biology

text: live

text: Generic

text: organism: Acyrthosiphon pisum strain: LSR1 strain sex: Parthenogenetic female dev stage: mixed (L2, L3, L4, adult)

text: Acyrthosiphon pisum

text: Pea aphid, whole bodies of nymphs and adult parthenogenetic females


Pool

text: Red Cross Transfusion Service for Upper Austria

text: live

text: Generic

text: Homo sapiens

text: Chromosome 6, MHC Sequence Capture


Avaricosa

text: Virginia Bioinformatics Institute

text: live

text: Generic

text: Initial transcriptomes were developed for three accepted species of unionid freshwater mussels. Alasmidonta varicosa were sampled from Croyden Brook, a tributary of the Connecticut River.

text: Alasmidonta varicosa

text: Alasmidonta varicosa transcriptome


text: CREG-UNLP

text: live

text: Generic

text: Wild Lu. longipalpis adult female specimens were captured with CDC traps in an Argentine locality where there have been Visceral Leishmaniasis outbreaks (Posadas, Misiones). The specimens were kept in RNAlater* (Applied Biosystems) until they were processed. In order to capture RNA viruses together with the rest of the associated microorganisms, total RNA was extracted from an individual sample composed of 100 female sandflies. These pooled samples were submitted for high-throughput pyrosequencing.

text: Lutzomyia longipalpis

text: Lu. longipalpis adult females from Posadas (Misiones, Argentina)


text: CREG-UNLP

text: live

text: Generic

text: Wild Lu. longipalpis adult male specimens were captured with CDC traps in an Argentine locality where there have been Visceral Leishmaniasis outbreaks (Posadas, Misiones). The specimens were kept in RNAlater* (Applied Biosystems) until they were processed. In order to capture RNA viruses together with the rest of the associated microorganisms, total RNA was extracted from an individual sample composed of 100 female sandflies. These pooled samples were submitted for high-throughput pyrosequencing.

text: Lutzomyia longipalpis

text: Lu. longipalpis adult males from Posadas (Misiones, Argentina)


text: CREG-UNLP

text: live

text: Generic

text: Wild Lu. longipalpis adult female specimens were captured with CDC traps in a non-endemic Visceral Leishmaniasis Brasilian locality (Minas Gerais, Brasil). The specimens were kept in RNAlater* (Applied Biosystems) until they were processed. In order to capture RNA viruses together with the rest of the associated microorganisms, total RNA was extracted from an individual sample composed of 100 female sandflies. These pooled samples were submitted for high-throughput pyrosequencing.

text: Lutzomyia longipalpis

text: Lu. longipalpis adult females from Cueva de Lapinha (Minas Gerais, Brasil)


text: CREG-UNLP

text: live

text: Generic

text: Wild Lu. longipalpis adult male specimens were captured with CDC traps in a non-endemic Visceral Leishmaniasis Brasilian locality (Minas Gerais, Brasil). The specimens were kept in RNAlater* (Applied Biosystems) until they were processed. In order to capture RNA viruses together with the rest of the associated microorganisms, total RNA was extracted from an individual sample composed of 100 female sandflies. These pooled samples were submitted for high-throughput pyrosequencing.

text: Lutzomyia longipalpis

text: Lu. longipalpis adult males from Cueva de Lapinha (Minas Gerais, Brasil)


text: J. Craig Venter Institute

text: live

text: Generic

text: Whole genome shotgun sequencing of Staphylococcus aureus 7211 using 454 technology

text: Staphylococcus aureus 7211


text: J. Craig Venter Institute

text: live

text: Generic

text: Whole genome shotgun sequencing of Staphylococcus aureus 2818 using 454 technology

text: Staphylococcus aureus 2818


text: J. Craig Venter Institute

text: live

text: Generic

text: Whole genome shotgun sequencing of Staphylococcus aureus 2278 using 454 technology

text: Staphylococcus aureus 2278


text: J. Craig Venter Institute

text: live

text: Generic

text: Whole genome shotgun sequencing of Staphylococcus aureus 2282 using 454 technology

text: Staphylococcus aureus 2282


text: J. Craig Venter Institute

text: live

text: Generic

text: Whole genome shotgun sequencing of Staphylococcus aureus 5612 using 454 technology

text: Staphylococcus aureus 5612


text: J. Craig Venter Institute

text: live

text: Generic

text: Whole genome shotgun sequencing of Staphylococcus aureus 6939 using 454 technology

text: Staphylococcus aureus 6939


text: J. Craig Venter Institute

text: live

text: Generic

text: Whole genome shotgun sequencing of Mycobacterium tuberculosis Staphylococcus aureus 3577 using 454 technology

text: Staphylococcus aureus 3577

text: Generic sample from Staphylococcus aureus 3577


text: J. Craig Venter Institute

text: live

text: Generic

text: Whole genome shotgun sequencing of Staphylococcus aureus 5892 using 454 technology

text: Staphylococcus aureus 5892


name: 1127589698541 Strptococcus pneumoniae 4935-00 SPNEUMONIAE-RL-01-780_TGAGTCTATC Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of Streptococcus pneumoniae 4935-00 using 454 technology

text: Streptococcus pneumoniae 4935-00

text: S. pneumoniae 4935-00-Gene Discovery - 454


name: 1127589698535 Strptococcus pneumoniae 48166 SPNEUMONIAE-RL-01-780_TCGCACACGT Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of Streptococcus pneumoniae 48166 using 454 technology

text: Streptococcus pneumoniae 48166

text: S. pneumoniae 48166-Gene Discovery - 454


name: 1127589698507 Strptococcus pneumoniae 0926-01 SPNEUMONIAE-RL-01-780_AGCGTACGTG Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of Streptococcus pneumoniae 0926-01 using 454 technology

text: Streptococcus pneumoniae 0926-01

text: S. pneumoniae 0926-01-Gene Discovery - 454


name: 1127589698529 Strptococcus pneumoniae 327/95 SPNEUMONIAE-RL-01-780_CTGACTATCG Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of Streptococcus pneumoniae 327/95 using 454 technology

text: Streptococcus pneumoniae 327/95

text: S. pneumoniae 327/95-Gene Discovery - 454


name: 1127589698543 Strptococcus pneumoniae 0711-00 SPNEUMONIAE-RL-01-780_TGCATATACG Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of Streptococcus pneumoniae 0711-00 using 454 technology

text: Streptococcus pneumoniae 0711-00

text: S. pneumoniae 0711-00-Gene Discovery - 454


name: 1127589698519 Strptococcus pneumoniae 567/98 SPNEUMONIAE-RL-01-780_CAGTACGATG Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of Streptococcus pneumoniae 567/98 using 454 technology

text: Streptococcus pneumoniae 567/98

text: S. pneumoniae 567/98-Gene Discovery - 454


name: 1127589698533 Strptococcus pneumoniae 1018-00 SPNEUMONIAE-RL-01-780_TAGCACTACT Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of Streptococcus pneumoniae 1018-00 using 454 technology

text: Streptococcus pneumoniae 1018-00

text: S. pneumoniae 1018-00-Gene Discovery - 454


name: 1127589698515 Strptococcus pneumoniae 39366 SPNEUMONIAE-RL-01-780_CACACTCGCG Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of Streptococcus pneumoniae 39366 using 454 technology

text: Streptococcus pneumoniae 39366

text: S. pneumoniae 39366-Gene Discovery - 454


name: 1127589698503 Strptococcus pneumoniae 34369/24F SPNEUMONIAE-RL-01-780_ACTATACATC Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of Streptococcus pneumoniae 34369/24F using 454 technology

text: Streptococcus pneumoniae 34369/24F

text: S. pneumoniae 34369/24F-Gene Discovery - 454


name: 1127589698527 Strptococcus pneumoniae 1464-00 SPNEUMONIAE-RL-01-780_CTATCGAGAG Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of Streptococcus pneumoniae 1464-00 using 454 technology

text: Streptococcus pneumoniae 1464-00

text: S. pneumoniae 1464-00-Gene Discovery - 454


name: 1127589698539 Strptococcus pneumoniae 8404-05 SPNEUMONIAE-RL-01-780_TCTACAGTAG Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of Streptococcus pneumoniae 8404-05 using 454 technology

text: Streptococcus pneumoniae 8404-05

text: S. pneumoniae 8404-05-Gene Discovery - 454


name: 1127589698509 Strptococcus pneumoniae Holland 1656 SPNEUMONIAE-RL-01-780_AGCTATATCG Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of Streptococcus pneumoniae Holland 1656 using 454 technology

text: Streptococcus pneumoniae Holland 1656

text: Holland 1656

text: S. pneumoniae Holland 1656-Gene Discovery - 454


name: 1127589698531 Strptococcus pneumoniae DANK 258 SPNEUMONIAE-RL-01-780_CTGTCTGACG Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of Streptococcus pneumoniae DANK 258 using 454 technology

text: Streptococcus pneumoniae DANK 258

text: DANK 258

text: S. pneumoniae DANK 258-Gene Discovery - 454


name: 1127589698537 Strptococcus pneumoniae 2584-08 Canada 19F SPNEUMONIAE-RL-01-780_TCGTCACGCG Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of Streptococcus pneumoniae 2584-08 Canada 19F using 454 technology

text: 2584-08 Canada 19F

text: S. pneumoniae 2584-08 Canada 19F-Gene Discovery - 454


name: 1127589698511 Strptococcus pneumoniae 3608-06 SPNEUMONIAE-RL-01-780_AGCTCGAGCG Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of Streptococcus pneumoniae 3608-06 using 454 technology

text: Streptococcus pneumoniae 3608-06

text: S. pneumoniae 3608-06-Gene Discovery - 454


name: 1127589698505 Strptococcus pneumoniae 8148-06 SPNEUMONIAE-RL-01-780_ACTCGCTAGC Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of Streptococcus pneumoniae 8148-06 using 454 technology

text: Streptococcus pneumoniae 8148-06

text: S. pneumoniae 8148-06-Gene Discovery - 454


name: 1127583808599 Strptococcus pneumoniae 6968-06 SPNEUMONIAE-RL-01-780_TGTGCGCTAG Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of Streptococcus pneumoniae 6968-06 using 454 technology

text: Streptococcus pneumoniae 6968-06

text: S. pneumoniae 6968-06-Gene Discovery - 454


name: 1127589698517 Strptococcus pneumoniae 5864-06 SPNEUMONIAE-RL-01-780_CACTCACTAG Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of Streptococcus pneumoniae 5864-06 using 454 technology

text: Streptococcus pneumoniae 5864-06

text: S. pneumoniae 5864-06-Gene Discovery - 454


name: 1127589698513 Strptococcus pneumoniae 1048 SPNEUMONIAE-RL-01-780_ATATATAGCG Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of Streptococcus pneumoniae 1048 using 454 technology

text: Streptococcus pneumoniae 1048

text: S. pneumoniae 1048-Gene Discovery - 454


name: 1127589698545 Strptococcus pneumoniae Verbist 186 SPNEUMONIAE-RL-01-780_TGCGCGAGTG Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of Streptococcus pneumoniae Verbist 186 using 454 technology

text: Streptococcus pneumoniae Verbist 186

text: Verbist 186

text: S. pneumoniae Verbist 186-Gene Discovery - 454


name: 1127589698547 Strptococcus pneumoniae 889/96 SPNEUMONIAE-RL-01-780_TGTACAGCTC Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of Streptococcus pneumoniae 889/96 using 454 technology

text: Streptococcus pneumoniae 889/96

text: S. pneumoniae 889/96-Gene Discovery - 454


name: 1127589698521 Strptococcus pneumoniae 2937-00 SPNEUMONIAE-RL-01-780_CGAGACACTG Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of Streptococcus pneumoniae 2937-00 using 454 technology

text: Streptococcus pneumoniae 2937-00

text: S. pneumoniae 2937-00-Gene Discovery - 454


name: 1127589698501 Strptococcus pneumoniae 7102-99 SPNEUMONIAE-RL-01-780_ACGATCGTAT Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of Streptococcus pneumoniae 7102-99 using 454 technology

text: Streptococcus pneumoniae 7102-99

text: S. pneumoniae 7102-99-Gene Discovery - 454


name: 1127589698525 Strptococcus pneumoniae 7720-99 SPNEUMONIAE-RL-01-780_CGTGTGACTG Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of Streptococcus pneumoniae 7720-99 using 454 technology

text: Streptococcus pneumoniae 7720-99

text: S. pneumoniae 7720-99-Gene Discovery - 454


name: 1127589698523 Strptococcus pneumoniae Split 28 SPNEUMONIAE-RL-01-780_CGCTCGTCTG Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of Streptococcus pneumoniae Split 28 using 454 technology

text: Streptococcus pneumoniae Split 28

text: Split 28

text: S. pneumoniae Split 28-Gene Discovery - 454


name: 1127589698558 Neisseria meningitidis M14879 NESSERIANGD-RL-01-786_AGCAGAGACG Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of N. meningitidis M14879 using 454 technology

text: Neisseria meningitidis M14879

text: Generic sample from Neisseria meningitidis M14879


name: 1127589698598 Neisseria meningitidis M15782 NESSERIANGD-RL-01-786_TCGTACTATC Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of N. meningitidis M15782 using 454 technology

text: Neisseria meningitidis M15782

text: Generic sample from Neisseria meningitidis M15782


name: 1127589698572 Neisseria meningitidis 1076 NESSERIANGD-RL-01-786_ATGTCAGTCG Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of N. meningitidis 1076 using 454 technology

text: Neisseria meningitidis 1076

text: Generic sample from Neisseria meningitidis 1076


name: 1127589698580 Neisseria meningitidis M09834 NESSERIANGD-RL-01-786_CGCTACGCGC Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of N. meningitidis M09834 using 454 technology

text: Neisseria meningitidis M09834

text: Generic sample from Neisseria meningitidis M09834


name: 1127589698568 Neisseria meningitidis M07092 NESSERIANGD-RL-01-786_ATCGATAGAC Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of N. meningitidis M07092 using 454 technology

text: Neisseria meningitidis M07092

text: Generic sample from Neisseria meningitidis M07092


name: 1127589698570 Neisseria meningitidis N 10/01 NESSERIANGD-RL-01-786_ATGTACGTGT Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of N. meningitidis N 10/01 using 454 technology

text: Neisseria meningitidis N 10/01

text: N 10/01

text: Generic sample from Neisseria meningitidis N 10/01


name: 1127589698552 Neisseria meningitidis M15113 NESSERIANGD-RL-01-786_ACTGAGTGAG Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of N. meningitidis M15113 using 454 technology

text: Neisseria meningitidis M15113

text: Generic sample from Neisseria meningitidis M15113


name: 1127589698604 Neisseria meningitidis M15041 NESSERIANGD-RL-01-786_TGATATCGTC Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of N. meningitidis M15041 using 454 technology

text: Neisseria meningitidis M15041

text: Generic sample from Neisseria meningitidis M15041


name: 1127589698560 Neisseria meningitidis 01102 NESSERIANGD-RL-01-786_AGCGACGTCT Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of N. meningitidis 01102 using 454 technology

text: Neisseria meningitidis 1102

text: Generic sample from Neisseria meningitidis 1102


name: 1127589698564 Neisseria meningitidis M15447 NESSERIANGD-RL-01-786_AGTGTACTGC Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of N. meningitidis M15447 using 454 technology

text: Neisseria meningitidis M15447

text: Generic sample from Neisseria meningitidis M15447


name: 1127589698592 Neisseria meningitidis N 18/01 NESSERIANGD-RL-01-786_TCATAGACAC Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of N. meningitidis N 18/01 using 454 technology

text: Neisseria meningitidis N 18/01

text: N 18/01

text: Generic sample from Neisseria meningitidis N 18/01


name: 1127589698566 Neisseria meningitidis N 29/06 NESSERIANGD-RL-01-786_ATAGCGTGAG Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of N. meningitidis N 29/06 using 454 technology

text: Neisseria meningitidis N 29/06

text: N 29/06

text: Generic sample from Neisseria meningitidis N 29/06


name: 1127589698550 Neisseria meningitidis 02108 NESSERIANGD-RL-01-786_ACGATGCTCG Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of N. meningitidis 02108 using 454 technology

text: Neisseria meningitidis 2108

text: Generic sample from Neisseria meningitidis 2108


name: 1127589698556 Neisseria meningitidis HF159 NESSERIANGD-RL-01-786_AGATACGCAG Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of N. meningitidis HF159 using 454 technology

text: Neisseria meningitidis HF159

text: Generic sample from Neisseria meningitidis HF159


name: 1127589698606 Neisseria meningitidis 21 RA V1 NESSERIANGD-RL-01-786_TGCGTAGACT Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of N. meningitidis 21 RA V1 using 454 technology

text: Neisseria meningitidis 21 RA V1

text: 21 RA V1

text: Generic sample from Neisseria meningitidis 21 RA V1


name: 1127589698590 Neisseria meningitidis 77215 NESSERIANGD-RL-01-786_TCACTACATG Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of N. meningitidis 77215 using 454 technology

text: Neisseria meningitidis 77215

text: Generic sample from Neisseria meningitidis 77215


name: 1127589698574 Neisseria meningitidis NmgNor24 NESSERIANGD-RL-01-786_CACTCTATCG Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of N. meningitidis NmgNor24 using 454 technology

text: Neisseria meningitidis NmgNor24

text: Generic sample from Neisseria meningitidis NmgNor24


name: 1127589698576 Neisseria meningitidis 01101 NESSERIANGD-RL-01-786_CGACGCACAG Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of N. meningitidis 01101 using 454 technology

text: Neisseria meningitidis 1101

text: Generic sample from Neisseria meningitidis 1101


name: 1127589698554 Neisseria meningitidis N 32/01 NESSERIANGD-RL-01-786_AGACGCTACT Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of N. meningitidis N 32/01 using 454 technology

text: Neisseria meningitidis N 32/01

text: N 32/01

text: Generic sample from Neisseria meningitidis N 32/01


name: 1127589698608 Neisseria meningitidis M17089 NESSERIANGD-RL-01-786_TGCTCAGACG Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of N. meningitidis M17089 using 454 technology

text: Neisseria meningitidis M17089

text: Generic sample from Neisseria meningitidis M17089


name: 1127589698584 Neisseria meningitidis MK110/03 NESSERIANGD-RL-01-786_TACAGTGAGC Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of N. meningitidis MK110/03 using 454 technology

text: Neisseria meningitidis MK110/03

text: Generic sample from Neisseria meningitidis MK110/03


name: 1127589698582 Neisseria meningitidis 115 CB V1 NESSERIANGD-RL-01-786_CTCACGACGC Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of N. meningitidis 115 CB V1 using 454 technology

text: Neisseria meningitidis 115 CB V1

text: 115 CB V1

text: Generic sample from Neisseria meningitidis 115 CB V1


name: 1127589698586 Neisseria meningitidis N 5/06 NESSERIANGD-RL-01-786_TATCTAGACG Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of N. meningitidis N 5/06 using 454 technology

text: Neisseria meningitidis N 5/06

text: N 5/06

text: Generic sample from Neisseria meningitidis N 5/06


name: 1127589698562 Neisseria meningitidis Mk 365/02 NESSERIANGD-RL-01-786_AGCTGACTAG Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of N. meningitidis Mk 365/02 using 454 technology

text: Neisseria meningitidis Mk 365/02

text: Mk 365/02

text: Generic sample from Neisseria meningitidis Mk 365/02


name: 1127589698602 Neisseria meningitidis 98/1101/134 NESSERIANGD-RL-01-786_TCTGTAGCTC Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of N. meningitidis 98/1101/134 using 454 technology

text: Neisseria meningitidis 98/1101/134

text: Generic sample from Neisseria meningitidis 98/1101/134


name: 1127589698594 Neisseria meningitidis 238 YN V1 NESSERIANGD-RL-01-786_TCGACGCTCT Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of N. meningitidis 238 YN V1 using 454 technology

text: Neisseria meningitidis 238 YN V1

text: 238 YN V1

text: Generic sample from Neisseria meningitidis 238 YN V1


name: 1127589698596 Neisseria meningitidis N 9/04 NESSERIANGD-RL-01-786_TCGCGCATCG Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of N. meningitidis N 9/04 using 454 technology

text: Neisseria meningitidis N 9/04

text: N 9/04

text: Generic sample from Neisseria meningitidis N 9/04


name: 1127589698578 Neisseria meningitidis M07194 NESSERIANGD-RL-01-786_CGACGTGCGC Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of N. meningitidis M07194 using 454 technology

text: Neisseria meningitidis M07194

text: Generic sample from Neisseria meningitidis M07194


name: 1127589698600 Neisseria meningitidis M15563 NESSERIANGD-RL-01-786_TCGTAGCACG Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of N. meningitidis M15563 using 454 technology

text: Neisseria meningitidis M15563

text: Generic sample from Neisseria meningitidis M15563


name: 1127589698588 Neisseria meningitidis N 16/02 NESSERIANGD-RL-01-786_TATGACTGAG Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Partial genome sequencing of N. meningitidis N 16/02 using 454 technology

text: Neisseria meningitidis N 16/02

text: N 16/02

text: Generic sample from Neisseria meningitidis N 16/02


text: MSKCC

text: live

text: Generic

text: V2 16s rRNA sequences obtained from fecal samples from allo-HSCT transplant patients. Samples were collected upon hospital admission and periodically during the transplant course

text: human gut metagenome

text: human gut metagenome


human gut metagenome default

text: MSKCC

text: live

text: Generic

text: human gut metagenome

text: human gut metagenome


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Paxillus involutus ATCC 200175

text: Paxillus involutus ATCC 200175

text: ATCC 200175

text: Generic sample from Paxillus involutus ATCC 200175


JA

text: LNCC

text: live

text: Generic

text: Collection site: Jaguaribe River Mangrove, Ceara state. City: Fortim. Estate: Ceara. Description of sampling site: Jaguaribe river mangrove is located in a estuary with an area of 1,735 km2. This ecosystem is impacted by the presence of shrimp farms, urban areas and runoff from agricultural areas. The soil was collected 3 km from the river mouth in a region with the presence of typical mangrove vegetation with the species Rhizophora mangle and Avicennia schaueriana.

text: soil metagenome

text: Jaguaribe river mangrove


Actinopus spinning gland

text: EMBRAPA Recursos Geneticos e Biotecnologia

text: live

text: Generic

text: The spinning glands of Actinopus spp. spiders were removed and sequenced

text: Actinopus

text: Actinopus spp. spinning gland


name: Gasteracantha cancriformis spinning gland

text: live

text: Generic

text: The spinning glands of Gasteracantha cancriformis spiders were removed and sequenced

text: Gasteracantha cancriformis


text: National Institute for Basic Biology

text: live

text: Generic

text: organism: Acyrthosiphon pisum; strain: LSR1; sex: Parthenogenetic female; tissue: ovary; dev stage: stage0-17

text: Acyrthosiphon pisum

text: Pea aphid, asexual ovaries, early stages (upto stage 17 embryos)


Pea aphid bacteriome

text: National Institute for Basic Biology

text: live

text: Generic

text: organism: Acyrthosiphon pisum; strain: LSR1; sex: Parthenogenetic female; tissue: bacteriome; dev stage: L3-L4 nymph and adult.

text: Acyrthosiphon pisum

text: Pea aphid bacteriome


Wheat long arm

text: Centro di Ricerca Interdipartimentale per le Biotecnologie Innovative

text: live

text: Generic

text: chinese spring

characteristic: cultivar

text: wheat chromosome 5A isolated by flow cytometry

text: Triticum aestivum

text: Triticum aestivum cv. chinese spring chromosome 5A - long arm


Wheat short arm

text: live

text: Generic

text: chinese spring

text: wheat chromosome 5A short arm isolated by flow cytometry

text: Triticum aestivum

text: Triticum aestivum cv chinese spring chromosome 5A - short arm


text: live

text: Generic

text: Wickerhamomyces anomalus NRRL Y-366-8

text: Wickerhamomyces anomalus NRRL Y-366-8

text: NRRL Y-366-8

text: Generic sample from Wickerhamomyces anomalus NRRL Y-366-8


TI

text: LNCC

text: live

text: Generic

text: Collection site: Ilha Grande Mangrove, Ceara state. City: Chaval. State: Ceara. Description of sampling site: Ilha Grande mangrove is considered the least impacted mangrove of the state, with little urbanization. It is located in an estuary with an area of 616 km2. The soil was collected 3 km from the river mouth in a region with the presence of typical of mangrove vegetation with the species Rhizophora mangle and Avicennia schaueriana.

text: soil metagenome

text: Timonha River mangrove


text: live

text: Generic

text: Ktedonobacter racemifer DSM 44963

text: Ktedonobacter racemifer DSM 44963

text: DSM 44963

text: Generic sample from Ktedonobacter racemifer DSM 44963


text: Eric Lai, Developmental Biology, Memorial Sloan Kettering Cancer Center

text: live

text: Generic

text: Drosophila melanogaster

text: r2d2[1] ovary total RNA

text: Ovary

characteristic: tissue

text: r2d2[1] ovary total RNA


text: live

text: Generic

text: Drosophila melanogaster

text: ago2[414] ovary total RNA

text: Ovary

text: ago2[414] ovary total RNA


text: Gordon, Pathology, Washington University

text: live

text: Generic

characteristic: genome accession

text: Methanobrevibacter smithii ATCC 35061

text: rRNA depleted total RNA

characteristic: sample type

text: in vitro culture

text: Methanobrevibacter smithii ATCC 35061

text: 36hours after innoculation

characteristic: time

text: HL=high hydrogen (80%), Low Formate concentration (2.8mM)

characteristic: treatment


text: live

text: Generic

text: Methanobrevibacter smithii

characteristic: organism

text: rRNA depleted total RNA

text: in vitro culture

text: 36hours after innoculation

characteristic: title


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: Methanobrevibacter smithii

text: rRNA depleted total RNA

text: in vitro culture

text: 36hours after innoculation

text: HH=high hydrogen (80%), high Formate concentration (44.1mM)


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Methanobrevibacter smithii ATCC 35061

text: rRNA depleted total RNA

text: in vitro culture

text: Methanobrevibacter smithii ATCC 35061

text: 36hours after innoculation


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Methanobrevibacter smithii ATCC 35061

text: rRNA depleted total RNA

text: in vitro culture

text: Methanobrevibacter smithii ATCC 35061


text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Methanobrevibacter smithii ATCC 35061

text: rRNA depleted total RNA

text: in vitro culture

text: Methanobrevibacter smithii ATCC 35061


text: live

text: Generic

characteristic: SRA accession

text: Methanobrevibacter smithii

text: rRNA depleted total RNA

text: in vitro culture

characteristic: strain


text: Helmholtz-Centre Munich

text: live

text: Generic

text: Sulphate

characteristic: electron acceptor

text: Fully 13C-lebelled toluene

characteristic: electron donor

text: 13 weeks

characteristic: incubation time

text: unidentified

text: Fresh Aquifer Sediment

text: Envirnomental contaminated aquifer sample enriched for DNA Stable Isotope Probing 1


text: Helmholtz-Centre Munich

text: live

text: Generic

text: Fe(III) oxyhydroxide

text: Fully 13C-lebelled toluene

text: 13 weeks

text: unidentified

text: Fresh Aquifer Sediment

text: Envirnomental contaminated aquifer sample enriched for DNA Stable Isotope Probing 2


PD

text: LNCC

text: live

text: Generic

text: Area of environmental conservation of Atlantic Forest biome, with 1,172 hectares of native forest and part of the Biosphere Reserve of the Brazilian Atlantic Forest, with vegetation represented by the Forest of Coastal Dune (80%), Beaches and Dunes Foothills (10%) and the Coastal Vegetable Tray (10%). The collection site at : Natal Dunes State Park is located on uneven ground, with indirect sunlight incidence, and of soil with a low degree of compaction, sandy, moist, grayish, and with many roots coming from varied vegetation.

characteristic: description

text: soil metagenome

text: Dunes Park


JC

text: LNCC

text: live

text: Generic

text: Joao Camara city has a very hot climate and semi-arid area of Caatinga biome 73 km from Natal. The collection site is located on flat land, with direct sunlight incidence, and of compact soil, dry, dark brown, with few roots.

text: soil metagenome

text: Joao Camara City


JD

text: LNCC

text: live

text: Generic

text: The Jundiai river begins at Serra Chata in Sitio Novo, Rio Grande do Norte - BR. Jundiai is one of the main tributary of Potengi river. Throughout its route, between the upper and middle course, the river is characterized by its intermittent drainage, where salinity can exceed four times the salinity of the sea. In its lower course nearby Macaiba-RN, it is characterized as perennial because it receives input from the tides, known as estuary-Potengi-Jundiai. The sampling points are found in open area, rough terrain and with the direct incidence of sunlight. The soil is moist, compact, dark colored and covered with thin layers of salt.

text: metagenome

text: Jundiai River


text: Laboratory of Muscle Stem Cells and Gene Regulation, National Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health

text: live

text: Generic

text: Proliferating Myoblasts

characteristic: developmental stage

text: Mus musculus

text: C2C12 myoblasts


text: live

text: Generic

text: 48-hours differentiated Myotubes

text: Mus musculus

characteristic: organism

text: C2C12 myoblasts


text: live

text: Generic

text: 6-hours differentiated Myotubes

text: Mus musculus

text: C2C12 myoblasts

characteristic: title


characteristic: External Id

text: live

text: Generic

text: 24-hours differentiated Myotubes

text: Mus musculus

text: C2C12 myoblasts


text: Chinnaiyan Lab, Michigan Center for Translational Pathology, University of Michigan

characteristic: INSDC center name

text: live

text: Generic

characteristic: cell line

text: cancer

characteristic: disease state

text: ETS-

characteristic: ets fusion status

text: Homo sapiens

characteristic: sample pool name

text: Cell Line

characteristic: sample type

text: prostate gland


characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: cancer

text: Homo sapiens

text: Cell Line

text: prostate gland


text: live

text: Generic

characteristic: SRA accession

text: cancer

text: ETS-

text: Homo sapiens

text: Cell Line

text: prostate gland

text: Metastatic Site

characteristic: tissue harvest site


text: live

text: Generic

text: LNCaP

text: cancer

text: Homo sapiens

characteristic: organism

text: LNCaP

text: Cell Line

text: prostate gland


text: live

text: Generic

text: LNCaP CDS parent

text: cancer

text: Homo sapiens

text: LNCaP CDS parent

text: Cell Line

text: prostate gland

text: Lymph node

characteristic: title


characteristic: External Id

text: live

text: Generic

text: LNCaP CDS1

text: cancer

text: Homo sapiens

text: LNCaP CDS1

text: Cell Line

text: prostate gland

text: Lymph node


characteristic: INSDC center name

text: live

text: Generic

text: LNCaP CDS2

text: cancer

text: Homo sapiens

text: LNCaP CDS2

text: Cell Line

text: prostate gland

text: Lymph node


text: live

text: Generic

text: LNCaP CDS3

characteristic: cell line

text: cancer

text: Homo sapiens

text: LNCaP CDS3

text: Cell Line

text: prostate gland

text: Lymph node


text: live

text: Generic

text: MDA PCa 2b

text: cancer

characteristic: disease state

text: ETS-

text: Homo sapiens

text: MDA PCa 2b

text: Cell Line

text: prostate gland


text: live

text: Generic

text: cancer

text: ERG+

characteristic: ets fusion status

text: Homo sapiens

text: Cell Line

text: prostate gland


text: live

text: Generic

text: benign

text: ETS-

text: Homo sapiens

characteristic: sample pool name

text: Cell Line

text: prostate gland


text: live

text: Generic

text: PrEC

text: benign

text: ETS-

text: Homo sapiens

text: PrEC

text: Cell Line

characteristic: sample type

text: prostate gland


characteristic: INSDC first public

text: live

text: Generic

text: PrSMC

text: benign

text: ETS-

text: Homo sapiens

text: PrSMC

text: Cell Line

text: prostate gland


characteristic: INSDC last update

text: live

text: Generic

text: RWPE

text: benign

text: ETS-

text: Homo sapiens

text: RWPE

text: Cell Line

text: prostate gland


characteristic: INSDC secondary accession

text: live

text: Generic

text: cancer

text: ERG+

text: Homo sapiens

characteristic: patient id

text: VCaP

text: Cell Line

text: prostate gland

text: prostate cancer

characteristic: tissue


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: cancer

text: ETS-

text: Homo sapiens

text: Cell Line

text: prostate gland

text: prostate cancer


text: live

text: Generic

characteristic: SRA accession

text: benign

text: ETS-

text: Homo sapiens

characteristic: organism

text: Cell Line

text: prostate gland

text: prostate cancer


characteristic: External Id

text: live

text: Generic

text: Proliferating Myoblasts

characteristic: developmental stage

text: Mus musculus

text: C2C12 myoblasts

characteristic: strain

characteristic: title


characteristic: INSDC center name

text: live

text: Generic

text: Confluent Myoblasts

text: Mus musculus

text: C2C12 myoblasts


text: Institute for Genomics and Systems Biology, University of Chicago

text: live

text: Generic

characteristic: antibody name

text: iso1 (y; bw cn sp)

characteristic: fly

text: White Lab

characteristic: manufacturer

text: Drosophila melanogaster

text: KW4-Hr39-D1_ChIPSeq_1 and 2


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Drosophila melanogaster


characteristic: INSDC secondary accession

text: live

text: Generic

text: White Lab

text: Drosophila melanogaster

text: KW3-Trl-D2_ChIPSeq_1 and 2


text: live

text: Generic

characteristic: catalog

text: Covance

text: Drosophila melanogaster


text: live

characteristic: INSDC status

text: Generic

text: Abcam

text: Drosophila melanogaster

text: HP1-Abcam_ChIPSeq_1 and 2


text: live

text: Generic

characteristic: NCBI submission model

text: GFP

text: : 15T_8-16_NW

text: transgenic

text: White Lab

text: Drosophila melanogaster

text: 15T_8-16_NW_GFP_ChIPSeq_1 and 2


text: live

text: Generic

characteristic: NCBI submission package

text: : 15T_8-16_NW

text: transgenic

text: Drosophila melanogaster


text: live

text: Generic

characteristic: SRA accession

text: Trem

text: Adult-Female

text: Hawley Lab - Cathleen Lake

text: Drosophila melanogaster

text: Adult-Female

text: Trem_ChIPSeq_1 and 2


text: live

text: Generic

text: Adult-Female

text: Drosophila melanogaster

characteristic: organism

text: Adult-Female


characteristic: External Id

text: live

text: Generic

text: White Lab

text: Drosophila melanogaster

text: E0-8h_D_KW3-D-D2_ChIPSeq_1 and 2


text: live

text: Generic

text: GFP

text: : 7T_W3L

characteristic: developmental stage

text: transgenic

text: White Lab

text: Drosophila melanogaster

text: 7T_W3L_GFP_ChIPSeq_1, 2 and 3


text: live

text: Generic

text: : 7T_W3L

text: transgenic

text: Drosophila melanogaster


text: live

text: Generic

text: GFP

text: : EcR_WPP-4-5h

text: transgenic

text: White Lab

text: Drosophila melanogaster

text: EcR_WPP-4-5h_GFP_ChIPSeq_1 and 2


text: live

text: Generic

text: : EcR_WPP-4-5h

text: transgenic

text: Drosophila melanogaster


text: Whitehead Institute for Biomedical Research and MIT Department of Biology

text: live

text: Generic

text: CFU-E late erythroid progenitors

characteristic: cell type

characteristic: genetic background

text: Mus musculus

text: Erythoid cells

text: microRNA expression in CFU-E late erythroid progenitors


characteristic: INSDC center name

text: live

text: Generic

text: Ter119+ mature erythroblasts

text: Mus musculus

text: Erythoid cells

text: microRNA expression in Ter119+ mature erythroblasts

characteristic: title


characteristic: GOLD Stamp ID

text: Gram+

characteristic: Gram Staining

text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Sporulating

characteristic: Sporulation

text: Free living

characteristic: biotic relationship

text: Rod-shaped

characteristic: cell shape

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Fresh water, Sediment

characteristic: environment

characteristic: investigation type

text: Nonmotile

characteristic: motility

text: Halanaerobium hydrogeniformans

text: 6.3 - 7.4

characteristic: ph

text: Halanaerobium sp. sapolanicus

characteristic: project name

text: Anaerobe

text: Halophile

characteristic: salinity

text: 34 - 42C

characteristic: temperature optimum

text: Mesophile

characteristic: temperature range

text: Halanaerobium hydrogeniformans, complete genome.


characteristic: External Id

text: DOE-GEBA 2007

characteristic: Funding Program

text: Gram-

characteristic: Greengenes ID

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Nonsporulating

text: Yes

characteristic: Type Strain

text: free living

text: Rod-shaped

text: Colombia

characteristic: country

text: Keywords: GSC:MIGS:2.1

text: Fresh water, Wastewater

text: Anaerobic lagoon of a dairy wastewater treatment plant in Colombia

characteristic: isolation site

text: anaerobic lagoon of a dairy wastewater treatment plant

characteristic: isolation-source

text: Nonmotile

text: Aminomonas paucivorans DSM 12260

characteristic: organism

text: Aminomonas paucivorans GLU-3, DSM 12260

text: DSM 12260, ATCC BAA-6

text: obligate anaerobe

text: DSM 12260

characteristic: strain

text: Mesophile

text: Aminomonas paucivorans DSM 12260 chromosome

text: type strain of Aminomonas paucivorans

characteristic: type material


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: Auriculularia delicata FFB10046 SS-5

characteristic: description

text: Auricularia subglabra TFB-10046 SS5

text: FFB10046 SS-5

text: Generic sample from Auricularia delicata TFB-10046 SS5

characteristic: title


text: Broad Institute

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Plasmodium falciparum SenT165.09

text: Plasmodium falciparum Th165.09

characteristic: sample name

text: Generic sample from Plasmodium falciparum SenT165.09


PRJNA176378.SAIAB 97564

text: Broad Institute

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: female

characteristic: host sex

text: voucher (virtual)

characteristic: isolation source

text: Latimeria chalumnae

text: SAIAB 97564

text: Wild caught

text: Generic sample from Latimeria chalumnae


text: Institute of Soil Science, Chinese Academy of Sciences

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Bacteria

text: soil metagenome


text: UNLV

text: live

text: Generic

text: Isolation source=Great Boiling Spring (GBS), spring water ; Collection date: 10/25/2008; Temp: 81C; pH: 7.2; N40degree 39.684' W119degree 21.973'; Country = USA: Nevada; US Great Basin

text: hot springs metagenome

characteristic: organism

text: Assessment of microbial communities in Great Boiling Spring (GBS) and Sandy’s Spring West (SSW) in coordination with nitrification and denitrification rate measurements.


text: UNLV

text: live

text: Generic

text: Isolation source=Great Boiling Spring (GBS), spring sediment ; Collection date: 10/25/2008; Temp: 81C; pH: 7.2; N40degree 39.684' W 119degree 21.973'; Country = USA: Nevada; US Great Basin

text: hot springs metagenome


text: LNCC

text: live

text: Generic

text: metagenome

text: Induced soil with crude glycerin (residue of biodiesel)


text: University of Bergen/Dept. of Biology

text: live

text: Generic

text: The Nyegga cold-seep field is located at the mid-Norwegian margin on the northern edge of the Storegga Slide (64*45.2707’ N; 05*04.0975’ E). Samples for DNA and protein extractions were taken from a push-core retrieved with aid of ROV from a pingo-structure within pockmark G11 (GS08-155-29ROV) at 746 m of water depth. DNA was extracted in three parallell FastDNA* SPIN Kit for Soil tubes (MP Biomedicals), in total of 1.7 g sediment sample.

text: sediment metagenome

text: Metagenomic study of an enriched ANME-1 community from a cold-seep sediment


Staphylococcus epidermidis FRI909

text: University of Rochester School of Medicine and Dentistry

text: live

text: Generic

text: A Staphylococcus epidermidis which produces staphylococcal entertoxin C and L

text: Staphylococcus epidermidis FRI909

characteristic: strain

text: Staphylococcus epidermidis FRI909


Vibrio cholerae 2010EL-1798

text: Centers for Disease Control

text: live

text: Generic

text: Ministere de la Sante Publique et de la Population, Haiti

characteristic: collected-by

characteristic: collection date

text: Haiti

characteristic: country

text: Vibrio cholerae serogroup O1, serotype Ogawa The Haitian Ministry of Public Health and Population (MSPP) was first notified of a cluster of patients with acute watery diarrhea and dehydration on October 19, 2010. Cholera was confirmed several days later. By November 13, 2010, MSPP had reported 16,111 persons hospitalized with acute watery diarrhea and 992 cholera deaths. More information can be found at http://www.cdc.gov/mmwr/PDF/wk/mm5945.pdf. This isolate was recovered from an early case of cholera from the Artibonite Department in Haiti during the 2010 outbreak. A whole genome shotgun sequence has been uploaded to GenBank. The strain matches other outbreak isolates from Haiti by PFGE, cholera toxin sequence-type, and susceptibility profile. It is susceptible to tetracycline (a proxy for doxycycline) and azithromycin, but resistant to sulfisoxazole nalidixic acid, and furazolidone, and has reduced susceptibility to ciprofloxacin.

text: Homo sapiens

characteristic: host

text: Pathogen

characteristic: keywords

text: Vibrio cholerae O1 str. 2010EL-1798

characteristic: serogroup

characteristic: serovar

text: Isolate from Haiti 2010 cholera outbreak

text: Vibrio cholerae O1 str. 2010EL-1798


Vibrio cholerae 2010EL-1792

characteristic: External Id

text: Centers for Disease Control

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Haiti

characteristic: description

text: Homo sapiens

text: Pathogen

text: Vibrio cholerae O1 str. 2010EL-1792

text: Vibrio cholerae O1 str. 2010EL-1792

characteristic: title


text: Yellow Sea Fisheries Research Institute (YSFRI), Chinese Academy of Fishery Sciences, Qingdao, 266071, China

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Carthamus tinctorius

text: seed

text: seed

characteristic: tissue

text: RNA-seq seed


text: live

text: Generic

characteristic: SRA accession

text: Carthamus tinctorius

characteristic: organism

text: petal

text: petal

text: RNA-seq petal


text: live

text: Generic

text: Carthamus tinctorius

text: leaf

text: leaf

text: RNA-seq leaf


text: UNLV

text: live

text: Generic

text: Isolation source=Sandy's Spring West(SSW), spring water ; Collection date: 10/26/2008; Temp: 79C; pH: 6.95; N40degree 39.684' W119degree 21.986'; Country = USA: Nevada; US Great Basin

text: hot springs metagenome


text: UNLV

text: live

text: Generic

text: Isolation source=Sandy's Spring West(SSW), spring sediment ; Collection date: 10/26/2008; Temp: 79C; pH: 6.95; N40 degree 39.684' W119degree 21.986'; Country = USA: Nevada; US Great Basin

text: hot springs metagenome


text: Bartel, Whitehead Institute

text: live

text: Generic

text: early globular

characteristic: developmental stage

characteristic: ecotype

text: Arabidopsis thaliana

text: Col-0 embryos

text: embryos

text: mRNA-Seq on wild-type early globular embryos


text: Bartel, Whitehead Institute

text: live

text: Generic

text: early globular

text: Arabidopsis thaliana

text: dcl1-5 embryos

characteristic: strain

text: embryos

text: mRNA-Seq on dcl1-5 early globular embryos


text: DBI, Plant and Soil Sciences, University of Delaware

text: live

text: Generic

text: Nipponbare transformed with Pi9 gene

characteristic: cultivar

text: Oryza sativa

text: Leaves

text: Control-Biotic Stress

characteristic: stage

text: Leaves

text: Mock treatment-24hr


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: Nipponbare transformed with Pi9 gene

text: Oryza sativa

text: Leaves

text: Biotic stress

text: Leaves


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Nipponbare

text: Oryza sativa Japonica Group

text: Leaves

text: Biotic stress

text: Leaves


text: live

text: Generic

text: Nipponbare

text: Oryza sativa Japonica Group

text: Callus

text: Developmental stage

text: Callus

text: 35 days-Callus

characteristic: title


characteristic: INSDC secondary accession

text: live

text: Generic

text: Nipponbare

text: Oryza sativa Japonica Group

text: Leaves

text: Abiotic stress

text: Leaves

text: Cold Stress-Leaves-2wks-Rep1


text: live

characteristic: INSDC status

text: Generic

text: Nipponbare

text: Oryza sativa Japonica Group

text: Leaves

text: Abiotic stress

text: Leaves

text: Cold Stress-Leaves-2wks-Rep2


text: live

text: Generic

characteristic: NCBI submission model

text: Nipponbare

text: Oryza sativa Japonica Group

text: Roots

text: Abiotic stress

text: Roots

text: Cold Stress-Roots-2wks-Rep1


text: live

text: Generic

characteristic: NCBI submission package

text: Nipponbare

text: Oryza sativa Japonica Group

text: Leaves

text: Abiotic stress

text: Leaves

text: Drought Stress-Leaves-2wks-Rep1


text: live

text: Generic

text: Nipponbare

text: Oryza sativa Japonica Group

text: Leaves

text: Abiotic stress

text: Leaves

characteristic: tissue

text: Drought Stress-Leaves-2wks-Rep2


text: live

text: Generic

characteristic: SRA accession

text: Nipponbare

text: Oryza sativa Japonica Group

text: Roots

text: Abiotic stress

text: Roots

text: Drought Stress-Roots-2wks-Rep1


text: live

text: Generic

text: Nipponbare

text: Oryza sativa Japonica Group

characteristic: organism

text: Seed

text: Developmental stage

text: Seed

text: 3 days-Germinating seed


text: live

text: Generic

text: Nipponbare

text: Oryza sativa Japonica Group

text: Panicle

text: Developmental stage

text: Panicle

text: 90 days-Immature panicle


text: live

text: Generic

text: Nipponbare

text: Oryza sativa Japonica Group

text: Leaves

text: Developmental stage

text: Leaves

text: 60 days-Mature leaves


text: live

text: Generic

text: Nipponbare

text: Oryza sativa Japonica Group

text: Pollen

text: Developmental stage

text: Pollen

text: Mature pollen


text: live

text: Generic

text: Nipponbare

text: Oryza sativa Japonica Group

text: Leaves

text: Abiotic stress

text: Leaves

text: Salt Stress-Leaves-2wks-Rep1


text: live

text: Generic

text: Nipponbare

text: Oryza sativa Japonica Group

text: Leaves

text: Abiotic stress

text: Leaves

text: Salt Stress-Leaves-2wks-Rep2


text: live

text: Generic

text: Nipponbare

text: Oryza sativa Japonica Group

text: Roots

text: Abiotic stress

text: Roots

text: Salt Stress-Roots-2wks-Rep1


text: live

text: Generic

text: Nipponbare

text: Oryza sativa Japonica Group

text: Stem

text: Developmental stage

text: Stem

text: 60 days- Stem


text: live

text: Generic

text: Nipponbare

text: Oryza sativa Japonica Group

text: Leaves

text: Control-abiotic stress

text: Leaves


text: live

text: Generic

text: Nipponbare

text: Oryza sativa Japonica Group

text: Roots

text: Control-abiotic stress

text: Roots


text: live

text: Generic

text: Nipponbare

text: Oryza sativa Japonica Group

text: Leaves

text: Biotic stress

text: Leaves

text: Rice leaf-beet armyworm damaged-24 hr- Rep1


text: live

text: Generic

text: Nipponbare

text: Oryza sativa Japonica Group

text: Leaves

text: Biotic stress

text: Leaves

text: Rice leaf-beet armyworm damaged-24 hr- Rep2


text: live

text: Generic

text: Nipponbare

text: Oryza sativa Japonica Group

text: Leaves

text: Biotic stress

text: Leaves

text: Rice leaf-Mechanical damaged-24 hr-Rep1


text: live

text: Generic

text: Nipponbare

text: Oryza sativa Japonica Group

text: Leaves

text: Biotic stress

text: Leaves

text: Rice leaf- Mechanical damaged-24 hr-Rep2


text: live

text: Generic

text: Nipponbare

text: Oryza sativa Japonica Group

text: Leaves

text: Biotic stress

text: Leaves

text: Rice leaf-water weevil damaged-24 hr-Rep1


text: live

text: Generic

text: Nipponbare

text: Oryza sativa Japonica Group

text: Leaves

text: Biotic stress

text: Leaves

text: Rice leaf-Water weevil damaged-24 hr-Rep2


text: live

text: Generic

text: Cypress

text: Oryza sativa

text: Seed

text: Developmental stage

text: Seed

text: Cypress-HighMilling-Developing seeds-6days-Rep1


text: live

text: Generic

text: Ilpumbyeo

text: Oryza sativa

text: Seed

text: Developmental stage

text: Seed

text: Ilpumbyeo-HighTaste-Developing seeds-6days-Rep1


text: live

text: Generic

text: Ilpumbyeo

text: Oryza sativa

text: Seed

text: Developmental stage

text: Seed

text: Ilpumbyeo-HighTaste-Developing seeds-6days-Rep2


text: live

text: Generic

text: LaGrue

text: Oryza sativa

text: Seed

text: Developmental stage

text: Seed

text: LaGrue-LowMilling-Developing seeds-6days-Rep1


text: live

text: Generic

text: LaGrue

text: Oryza sativa

text: Seed

text: Developmental stage

text: Seed

text: LaGrue-LowMilling-Developing seeds-6days-Rep2


text: live

text: Generic

text: Nipponbare

text: Oryza sativa Japonica Group

text: Seed

text: Developmental stage

text: Seed

text: Nipponbare-Control-Developing seeds-6days-Rep1


text: live

text: Generic

text: Nipponbare

text: Oryza sativa Japonica Group

text: Seed

text: Developmental stage

text: Seed

text: Nipponbare-Control-Developing seeds-6days-Rep2


text: live

text: Generic

text: Oryza sativa

text: Seed

text: Developmental stage

text: Seed

text: YR15965-LowTaste-Developing seeds-6days-Rep1


text: live

text: Generic

text: Oryza sativa

text: Seed

text: Developmental stage

text: Seed

text: YR15965-LowTaste-Developing seeds-6days-Rep2


text: live

text: Generic

text: Nipponbare

text: Oryza sativa Japonica Group

text: Flower

text: Developmental stage

text: Flower

text: Mature Sigma and Ovary


text: live

text: Generic

text: Nipponbare

text: Oryza sativa Japonica Group

text: Roots

text: Developmental stage

text: Roots

text: 60days-Mature roots


text: Gene Expression Omnibus

text: live

text: Generic

characteristic: batch

text: Cellular Dynamics

characteristic: biomaterial provider

text: Cell Line

characteristic: biomaterial type

text: H1 stem cells from Cellular Dynamics

characteristic: description

characteristic: differentiation stage

characteristic: line

text: undifferentiated

characteristic: lineage

text: TESR

characteristic: medium

text: genomic DNA

characteristic: molecule

text: Homo sapiens

characteristic: passage

text: male

characteristic: sex

text: Generic sample from Homo sapiens


characteristic: External Id

text: Gene Expression Omnibus

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Cellular Dynamics

text: Cell Line

text: H1 stem cells from Cellular Dynamics

text: undifferentiated

text: TESR

text: genomic DNA

text: Homo sapiens

text: male

text: Generic sample from Homo sapiens

characteristic: title


text: Genome Institute of Singapore

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: CD4+ T cells

characteristic: cell type

characteristic: chip antibody

text: abcam

characteristic: chip antibody vendor

text: Homo sapiens

characteristic: organism

text: blood cells

text: CD4 H2A


text: Genome Institute of Singapore

text: live

text: Generic

text: CD4+ T cells

text: millipore

text: Homo sapiens

text: blood cells

text: CD4 H2AX


text: Genome Institute of Singapore

text: live

text: Generic

text: Jurkat cells

text: millipore

text: Homo sapiens

text: blood cells

text: Jurkat H2AX


text: Genome Institute of Singapore

text: live

text: Generic

text: HL-60 cells

text: millipore

text: Homo sapiens

text: blood cells

text: HL60 H2AX


text: Genome Institute of Singapore

text: live

text: Generic

text: CD4+ T cells

text: millipore

text: Homo sapiens

text: blood cells

text: CD4 γ-H2AX after irradiation


text: Genome Institute of Singapore

text: live

text: Generic

text: Jurkat cells

text: millipore

text: Homo sapiens

text: blood cells

text: Jurkat γ-H2AX


text: Genome Institute of Singapore

text: live

text: Generic

text: Jurkat cells

text: Homo sapiens

text: blood cells

text: Input DNA


text: J. Craig Venter Institute

text: live

text: Generic

text: Whole genome shotgun sequencing of Mycobacterium tuberculosis Staphylococcus aureus 2277 using 454 technology

characteristic: description

text: Staphylococcus aureus 2274

characteristic: strain

text: Generic sample from Staphylococcus aureus 2274


text: J. Craig Venter Institute

text: live

text: Generic

text: Whole genome shotgun sequencing of Staphylococcus aureus 7210 using 454 technology

text: Staphylococcus aureus 7210


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Desulfotomaculum nigrificans DSM 574

text: Desulfotomaculum nigrificans DSM 574

text: DSM 574

text: Generic sample from Desulfotomaculum nigrificans DSM 574


text: DOE-GEBA 2007

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: IMG/ER 2.7

characteristic: Gene Calling Method

text: Gram-

characteristic: Gram Staining

characteristic: Greengenes ID

text: live

text: Generic

text: Yes

characteristic: Type Strain

text: free living

characteristic: biotic relationship

text: Coccus-shaped

characteristic: cell shape

text: USA: Oregon

characteristic: country

characteristic: culture-collection

text: Keywords: GSC:MIGS:2.1

text: Fresh water, Hot spring

characteristic: environment

characteristic: investigation type

text: algal mat from Kah-nee-tah Hot Spring in Oregon

characteristic: isolation site

text: algal mat from Kah-nee-tah hot spring

characteristic: isolation-source

text: 44.86123 N 121.201439 W

characteristic: lat lon

text: Motile

characteristic: motility

text: Isosphaera pallida ATCC 43644

text: Isosphaera pallida IS1B, ATCC 43644

characteristic: project name

text: ATCC 43644, DSM 9630

text: aerobe

text: ATCC 43644

characteristic: temperature optimum

text: Mesophile

characteristic: temperature range

text: Isosphaera pallida ATCC 43644, complete genome

text: type strain of Isosphaera pallida

characteristic: type material


text: Blood

characteristic: Body Sample Site

text: Septicemia

characteristic: Diseases

characteristic: External Id

text: DOE-GEBA 2007

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Anas platyrhynchos (duck), gucks, geese,turkeys and waterfowls distributed worldwide

characteristic: Host Name

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: isolated by Bruner and Fabricant

characteristic: Isolation Comments

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Nonsporulating

characteristic: Sporulation

text: Yes

text: symbiont

text: Rod-shaped

characteristic: collection date

text: USA

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Septicemic disease in waterfowls. Septicemia anserum exsudativa. Epizootic infectious disease of domestic birds.

characteristic: host health

text: Duck blood

text: blood

text: Nonmotile

text: Riemerella anatipestifer ATCC 11845 = DSM 15868

characteristic: organism

text: Riemerella anatipestifer A350/72, DSM 15868

text: DSM 15868, ATCC 11845, CCUG 14215, JCM 9532, LMG 11054, NCTC 11014

text: microaerophilic

text: DSM 15868

characteristic: strain

text: Mesophile

text: Riemerella anatipestifer DSM 15868, complete genome.

characteristic: title

text: type strain of Riemerella anatipestifer


characteristic: External Id

text: MPIMG

text: live

text: Generic

text: Homo sapiens

text: combing chromosome sorting and deep sequencing to decipher 2 cases of autosomal recessive mental retardation


text: J. Craig Venter Institute

characteristic: INSDC center name

text: live

text: Generic

text: Whole genome shotgun sequencing of Staphylococcus aureus 2275 using 454 technology

text: Staphylococcus aureus 2275


text: J. Craig Venter Institute

characteristic: INSDC first public

text: live

text: Generic

text: Whole genome shotgun sequencing of Staphylococcus aureus 2279 using 454 technology

text: Staphylococcus aureus 2279


text: J. Craig Venter Institute

characteristic: INSDC last update

text: live

text: Generic

text: Whole genome shotgun sequencing of Staphylococcus aureus 2280 using 454 technology

text: Staphylococcus aureus 2280


text: J. Craig Venter Institute

characteristic: INSDC secondary accession

text: live

text: Generic

text: Whole genome shortgun sequencing of Staphylococcus aureus 2283 using 454 technology

text: Staphylococcus aureus 2283


text: INMI - National Institute for Infectious Diseases - L. Spallanzani

text: live

characteristic: INSDC status

text: Generic

text: Human immunodeficiency virus

text: DETECTION OF QUASISPECIES VARIANTS PREDICTED TO USE CXCR4 BY ULTRA-DEEP PYROSEQUENCING DURING EARLY HIV INFECTION


24hr heads, solitary

text: University of Nebraska-Lincoln

text: live

text: Generic

text: Heads from female pea aphids, solitary treatment, 24 hour timepoint

text: Acyrthosiphon pisum

text: 24hr heads, solitary


24 hr heads, crowded

text: University of Nebraska-Lincoln

text: live

text: Generic

text: Heads from female pea aphids, crowded treatment, 24 hour time point

text: Acyrthosiphon pisum

text: 24hr heads, crowded