characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

text: Abcam

text: male

text: wild-type

text: Mus musculus

text: H3K4me3 ChIP-seq

text: liver

text: Sample 108_H3K4me3 ChIP-seq


status: PUBLIC

characteristic: External Id

text: Joseph S. Takahashi, HHMI, Neuroscience, University of Texas Southwestern Medical Center

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

tag: attribute

characteristic: chip antibody

text: Abcam

characteristic: chip antibody vendor

text: male

characteristic: gender

text: wild-type

characteristic: genotype/variation

text: Mus musculus

characteristic: organism

text: H3K4me3 ChIP-seq

characteristic: strain background

characteristic: time

text: liver

characteristic: tissue

text: Sample 109_H3K4me3 ChIP-seq

characteristic: title


characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

text: Abcam

text: male

text: wild-type

text: Mus musculus

text: H3K9ac ChIP-seq

text: liver

text: Sample 111_H3K9ac ChIP-seq


characteristic: External Id

characteristic: INSDC first public

text: live

text: Generic

text: Abcam

text: male

text: wild-type

text: Mus musculus

text: H3K9ac ChIP-seq

text: liver

text: Sample 112_H3K9ac ChIP-seq


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Abcam

text: male

text: wild-type

text: Mus musculus

text: H3K9ac ChIP-seq

text: liver

text: Sample 113_H3K9ac ChIP-seq


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission package

text: Abcam

text: male

text: wild-type

text: Mus musculus

text: H3K9ac ChIP-seq

text: liver

text: Sample 114_H3K9ac ChIP-seq


text: live

text: Generic

characteristic: SRA accession

characteristic: chip antibody

text: Abcam

text: male

text: wild-type

text: Mus musculus

text: H3K9ac ChIP-seq

text: liver

text: Sample 115_H3K9ac ChIP-seq


text: live

text: Generic

text: Abcam

characteristic: chip antibody vendor

text: male

characteristic: gender

text: wild-type

text: Mus musculus

text: H3K9ac ChIP-seq

text: liver

text: Sample 116_H3K9ac ChIP-seq


text: live

text: Generic

text: male

text: wild-type

characteristic: genotype/variation

text: Mus musculus

characteristic: organism

text: Input DNA for H3K9ac ChIP-seq

text: mixture of CT0 to 20

text: liver

text: Sample 117_Input DNA for H3K9ac ChIP-seq


text: live

text: Generic

text: Abcam

text: male

text: wild-type

text: Mus musculus

text: H3K27ac ChIP-seq

characteristic: strain background

characteristic: time

text: liver

text: Sample 118_H3K27ac ChIP-seq


text: live

text: Generic

text: Abcam

text: male

text: wild-type

text: Mus musculus

text: H3K27ac ChIP-seq

text: liver

characteristic: tissue

text: Sample 119_H3K27ac ChIP-seq

characteristic: title


characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

text: Abcam

text: male

text: wild-type

text: Mus musculus

text: H3K27ac ChIP-seq

text: liver

text: Sample 120_H3K27ac ChIP-seq


characteristic: External Id

characteristic: INSDC first public

text: live

text: Generic

text: Abcam

text: male

text: wild-type

text: Mus musculus

text: H3K27ac ChIP-seq

text: liver

text: Sample 121_H3K27ac ChIP-seq


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Abcam

text: male

text: wild-type

text: Mus musculus

text: H3K27ac ChIP-seq

text: liver

text: Sample 122_H3K27ac ChIP-seq


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission package

text: Abcam

text: male

text: wild-type

text: Mus musculus

text: H3K27ac ChIP-seq

text: liver

text: Sample 123_H3K27ac ChIP-seq


text: live

text: Generic

characteristic: SRA accession

text: male

text: wild-type

text: Mus musculus

text: Input DNA for H3K27ac ChIP-seq

text: mixture of CT0 to 20

text: liver

text: Sample 124_Input DNA for H3K27ac ChIP-seq


text: live

text: Generic

characteristic: chip antibody

text: Abcam

characteristic: chip antibody vendor

text: male

text: wild-type

text: Mus musculus

text: H3K36me3 ChIP-seq

text: liver

text: Sample 125_H3K36me3 ChIP-seq


text: live

text: Generic

text: Abcam

text: male

characteristic: gender

text: wild-type

characteristic: genotype/variation

text: Mus musculus

text: H3K36me3 ChIP-seq

text: liver

text: Sample 126_H3K36me3 ChIP-seq


text: live

text: Generic

text: Abcam

text: male

text: wild-type

text: Mus musculus

characteristic: organism

text: H3K36me3 ChIP-seq

characteristic: strain background

text: liver

text: Sample 127_H3K36me3 ChIP-seq


text: live

text: Generic

text: Abcam

text: male

text: wild-type

text: Mus musculus

text: H3K36me3 ChIP-seq

characteristic: time

text: liver

characteristic: tissue

text: Sample 128_H3K36me3 ChIP-seq


characteristic: INSDC center name

text: live

text: Generic

text: Abcam

text: male

text: wild-type

text: Mus musculus

text: H3K36me3 ChIP-seq

text: liver

text: Sample 129_H3K36me3 ChIP-seq

characteristic: title


characteristic: External Id

text: live

text: Generic

characteristic: NCBI submission model

text: Abcam

text: male

text: wild-type

text: Mus musculus

text: H3K36me3 ChIP-seq

text: liver

text: Sample 130_H3K36me3 ChIP-seq


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Abcam

text: male

text: wild-type

text: Mus musculus

text: H3K79me2 ChIP-seq

text: liver

text: Sample 131_H3K79me2 ChIP-seq


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Abcam

text: male

text: wild-type

text: Mus musculus

text: H3K79me2 ChIP-seq

text: liver

text: Sample 132_H3K79me2 ChIP-seq


text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Abcam

text: male

text: wild-type

text: Mus musculus

text: H3K79me2 ChIP-seq

text: liver

text: Sample 133_H3K79me2 ChIP-seq


text: live

text: Generic

characteristic: chip antibody

text: Abcam

characteristic: chip antibody vendor

text: male

text: wild-type

text: Mus musculus

text: H3K79me2 ChIP-seq

text: liver

text: Sample 134_H3K79me2 ChIP-seq


text: live

text: Generic

text: Abcam

text: male

characteristic: gender

text: wild-type

characteristic: genotype/variation

text: Mus musculus

text: H3K79me2 ChIP-seq

text: liver

text: Sample 135_H3K79me2 ChIP-seq


text: live

text: Generic

text: Abcam

text: male

text: wild-type

text: Mus musculus

characteristic: organism

text: H3K79me2 ChIP-seq

characteristic: strain background

text: liver

text: Sample 136_H3K79me2 ChIP-seq


text: live

text: Generic

text: male

text: wild-type

text: Mus musculus

text: mixture of CT0 to 20

characteristic: time

text: liver

characteristic: tissue

text: Sample 137_Input DNA for H3K36me3/K79me2 ChIP-seq #1


characteristic: INSDC center name

text: live

text: Generic

text: male

text: wild-type

text: Mus musculus

text: mixture of CT0 to 20

text: liver

text: Sample 138_Input DNA for H3K36me3/K79me2 ChIP-seq #2

characteristic: title


characteristic: External Id

text: University of Pennsylvania, Bushman Laboratory

text: live

text: Generic

characteristic: NCBI submission model

text: Unassigned sequences from experiment

characteristic: description

text: metagenome

text: metagenome sequence


text: LRBGE, CCR, NCI / NIH

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: 8 week

characteristic: age

text: male

text: Mus musculus

text: Dnase I

characteristic: restriction enzyme

text: fresh liver tissue

characteristic: strain

text: Liver

text: Dnase I


text: LRBGE, CCR, NCI / NIH

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: 8 week

text: male

characteristic: gender

text: Mus musculus

text: Benzonase 0.25U

text: intact frozen liver tissue

text: Liver

text: Benzonase 0.25U


text: LRBGE, CCR, NCI / NIH

text: live

text: Generic

text: 8 week

text: male

text: Mus musculus

characteristic: organism

text: Benzonase 1U

text: intact frozen liver tissue

text: Liver

text: Benzonase 1U


text: LRBGE, CCR, NCI / NIH

text: live

text: Generic

text: 8 week

text: male

text: Mus musculus

text: Benzonase 4U

text: intact frozen liver tissue

text: Liver

characteristic: tissue

text: Benzonase 4U


text: LRBGE, CCR, NCI / NIH

characteristic: INSDC center name

text: live

text: Generic

text: 8 week

text: male

text: Mus musculus

text: Cyanase 0.25U

text: intact frozen liver tissue

text: Liver

text: Cyanase 0.25U


text: LRBGE, CCR, NCI / NIH

text: live

text: Generic

text: 8 week

text: male

text: Mus musculus

text: Cyanase 1U

text: intact frozen liver tissue

text: Liver

text: Cyanase 1U

characteristic: title


characteristic: External Id

text: LRBGE, CCR, NCI / NIH

text: live

text: Generic

text: 8 week

text: male

text: Mus musculus

text: Cyanase 4U

text: intact frozen liver tissue

text: Liver

text: Cyanase 4U


text: Department of Pathology, Yale University

text: live

text: Generic

characteristic: NCBI submission model

characteristic: cell line

text: Primary human fibroblast

characteristic: cell type

text: control [empty retroviral vector]

characteristic: genotype/variation

text: Homo sapiens

text: WI-38 cells with pBABE /Zeo vector

text: WI-38 cells with pBABE /Zeo vector #1


characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Primary human fibroblast

text: control [empty retroviral vector]

text: Homo sapiens

text: WI-38 cells with pBABE /Zeo vector

text: WI-38 cells with pBABE /Zeo vector #2


text: live

text: Generic

text: Primary human fibroblast

text: infected with BRAFV600E

text: Homo sapiens

text: WI-38 cells with pBABE /BRAV600E

text: WI-38 cells with pBABE /BRAV600E#1


text: live

text: Generic

text: Primary human fibroblast

text: infected with BRAFV600E

text: Homo sapiens

text: WI-38 cells with pBABE /BRAFV600E

text: WI-38 cells with pBABE /BRAV600E#2


text: live

text: Generic

text: Primary human fibroblast

text: control [serum starved]

text: Homo sapiens

text: WI-38 cells serum starved fro 48 hrs

text: WI-38 cells serum starved for 48 hrs


D. andersoni sialotranscriptome 0

text: Washington State University

text: live

text: Generic

text: Dermacentor andersoni

text: D. andersoni sialotranscriptome day 0


D. andersoni sialotranscriptome 2

text: Washington State University

text: live

text: Generic

text: Dermacentor andersoni

text: D. andersoni sialotranscriptome day 2


D. andersoni sialotranscriptome 5

text: Washington State University

text: live

text: Generic

text: Dermacentor andersoni

text: D. andersoni sialotranscriptome day 5


text: Quest Diagnostics

text: live

text: Generic

text: GS JR run. Roche/454 barcodes. 11 samples, MID5-MID9, MID11,13,15,16,17

characteristic: description

text: Human immunodeficiency virus 1

text: Method Comparison Panel 062411_1RDA


ProstateCancerCell

text: UCLA

text: live

characteristic: INSDC status

text: Generic

text: Two prostate cancer cell lines. PC3E and GS689.Li

text: Homo sapiens

text: Prostate Cancer Cell RNA-Seq (PC3E and GS689.Li)


text: Quest Diagnostics

text: live

text: Generic

characteristic: NCBI submission package

text: 7 pooled samples, Roche/454 barcodes MID10-MID13 and MID15-MID17

text: Human immunodeficiency virus 1

text: Method Comparison Panel 063011_1RDA


text: RIKEN Center for Developmental Biology

text: live

text: Generic

text: planula

characteristic: dev-stage

text: Aurelia aurita

text: whole body

characteristic: tissue-type

text: Moon Jellyfish cDNA library


text: RIKEN Center for Developmental Biology

text: live

text: Generic

text: 5 days after hatching

text: Ephydatia fluviatilis

characteristic: organism

text: whole body

text: Freshwater Sponge cDNA library


text: Central Institute of Medicinal and Aromatic Plants

text: live

text: Generic

text: CIM-Arogya

characteristic: cultivar

text: The cDNA library was constructed from polyA+ RNA using the Clontech PCR-Select cDNA subtraction kit. A suppression subtractive hybridization was performed between polyA+ RNA isolated from NaCl (stress) treated and untreated (control) A. annua seedlings. The cDNAs were cloned randomly in pGEM-T Easy vector.

text: young seedling

text: Artemisia annua

text: Eco RI

text: Eco RI

text: hermaphrodite

characteristic: sex

text: seedling

text: Artemisia annua salinity stressed subtracted cDNA library

text: Plasmid

text: pGEM-T Easy

characteristic: vector


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: The cDNA library was constructed from polyA+ RNA using the Clontech PCR-Select cDNA subtraction kit (Clontech). A suppression subtractive hybridization was performed between young leaf (tester) and immature fruit (driver) polyA+ RNA. The primary PCR was carried out for 28 cycles and it was followed by a secondary PCR of 12 cycles using Advantage polymerase mixture (Clontech). Subsequently, the cDNAs were cloned randomly in pGEM-T Easy vector.

text: young leaf

text: Azadirachta indica

text: Eco RI

text: Eco RI

text: hermaphrodite

text: leaf

text: Azadirachta indica subtracted cDNA library of leaf tissue

characteristic: title

text: plasmid

text: pGEM-T Easy


text: National Research Centre on Plant Biotechnology

text: live

text: Generic

characteristic: NCBI submission model

text: Pennisetum glaucum (L.) R.Br. seedlings were grown under pot conditions in National Phytotron facility, IARI, New Delhi. 12 days old seedlings were subjected to heat stress of 46 C for 30 min to 24 hrs. Total RNA was isolated from seedlings of different heat stress treatments and cDNA was prepared from the pooled RNA. Suppression Subtractive Hybridization (SSH) library was developed using the prepared cDNA in pGEMT easy vector and transformed into E. coli.

text: 12 days old seedlings

text: E. coli strain NEB 10-beta

characteristic: lab-host

text: Cenchrus americanus

text: EcoRI

text: EcoRI

text: seedlings without root

text: High temperature responsive ESTs from SSH library of Pennisetum glaucum (L.) R.Br. seedlings

text: Plasmid

text: pGEMT-easy


text: Guizhou University

characteristic: INSDC first public

text: live

text: Generic

text: differential display RT-PCR methods

text: vegetative growth phase

text: Lolium arundinaceum

text: leaf

text: differential display library from leaves of two tall fescue cultivars


text: Zhejiang University

characteristic: INSDC last update

text: live

text: Generic

characteristic: SRA accession

text: Biqi

text: Morella rubra

text: General Sample for Morella rubra


text: Wellcome Trust Centre for Human Genetics/ U. of Oxford

characteristic: INSDC secondary accession

text: live

text: Generic

text: TAG 1 ES cells

characteristic: cell type

text: Total RNA containing short RNA fraction

characteristic: molecule subtype

text: Mus musculus

text: TAG 1 ES_Control

text: Control


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission package

text: TAG 1 ES cells

text: Total RNA containing short RNA fraction

text: Mus musculus

text: TAG 1 ES_SB

text: SB

text: SB-431541 treated (P-Smad2/3 repressed)

characteristic: treated with


text: live

text: Generic

text: TAG 1 ES cells

text: Total RNA containing short RNA fraction

text: Mus musculus

characteristic: organism

text: TAG 1 ES_Dox

text: Dox

text: Dox treated (P-Smad2/3 induced)


text: German Center for Cancer Research

text: live

text: Generic

text: adult

characteristic: developmental stage

text: Schistosoma mansoni

text: male worms

text: puerto rico

characteristic: strain

text: Sman


characteristic: External Id

text: German Center for Cancer Research

text: live

text: Generic

text: 0-2 hour embryos

text: In this sample 10ng of human sperm DNA was spiked in

characteristic: note

text: Drosophila melanogaster

text: embryos


text: German Center for Cancer Research

characteristic: INSDC center name

text: live

text: Generic

text: 0-2 hour embryos

text: Drosophila melanogaster

text: embryos

characteristic: title


text: Matthew Meyerson, Dana-Farber Cancer Institute

text: live

text: Generic

characteristic: NCBI submission model

characteristic: cell line

text: Homo sapiens


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: NKX2-1 [Bethyl Laboratories, BL4000]

characteristic: antibody

text: Homo sapiens


characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: FOXA1 [Abcam, ab23738 (lot 947435)]

text: Homo sapiens


Marine

text: University of Malaya

text: live

characteristic: INSDC status

text: Generic

text: Mycobacterium tuberculosis HN4143

text: A analysis of Marine metagenomics sample using Bioinformatics approaches


text: The Chinese University of Hong Kong

text: live

text: Generic

characteristic: NCBI submission package

text: Reference strain used for the generation of Bacillus subtilis mutants that have different abilities of growth on tryptophan and its analogue fluorotryptophan [1]. 1. Mat W-K, Xue H, Wong JT (2010) Genetic Code Mutations: The Breaking of a Three Billion Year Invariance. PLoS ONE 5: e12206. doi:10.1371/journal.pone.0012206.

characteristic: description

text: Bacillus subtilis

text: Bacillus subtilis str. QB928


text: The Chinese University of Hong Kong

text: live

text: Generic

text: Bacillus subtilis

characteristic: organism

text: Bacillus subtilis str. LC8


text: The Chinese University of Hong Kong

text: live

text: Generic

text: Bacillus subtilis

text: Bacillus subtilis str. LC33


text: The Chinese University of Hong Kong

text: live

text: Generic

text: Bacillus subtilis

text: Bacillus subtilis str. HR23


text: The Chinese University of Hong Kong

text: live

text: Generic

text: Bacillus subtilis

text: Bacillus subtilis str. MR3


text: The Chinese University of Hong Kong

text: live

text: Generic

text: Bacillus subtilis

text: Bacillus subtilis str. TR7-A


text: The Chinese University of Hong Kong

text: live

text: Generic

text: Bacillus subtilis

text: Bacillus subtilis str. TR7-B


text: Uppsala University

text: live

text: Generic

text: TCTCATC - HH4FV4N02

characteristic: barcode - sff file

text: Generic

characteristic: biosamplemodel

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 1ori


characteristic: External Id

text: Uppsala University

text: live

text: Generic

text: TCTCACT - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 1-Ia


text: Uppsala University

text: live

text: Generic

text: TCTCAGA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 1-Ib


text: Uppsala University

text: live

text: Generic

text: TCTGAGT - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 1-Ic


text: Uppsala University

text: live

text: Generic

text: TCATAGC - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 1-IIa


text: Uppsala University

text: live

text: Generic

text: TCATCTC - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 1-IIb


text: Uppsala University

text: live

text: Generic

text: TCATCGA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 1-IIc


text: Uppsala University

text: live

text: Generic

text: TCATGAC - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 1-IIIa


text: Uppsala University

text: live

text: Generic

text: TCATGCA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 1-IIIb


text: Uppsala University

text: live

text: Generic

text: TCACTAC - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 1-IIIc


text: Uppsala University

text: live

text: Generic

text: TCACTCT - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 1-IVa


text: Uppsala University

text: live

text: Generic

text: TCACTGA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 1-IVb


text: Uppsala University

text: live

text: Generic

text: TCACACA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 1-IVc


DispExp-2 ori

text: Uppsala University

text: live

text: Generic

text: TCACAGT - HH4FV4N02

characteristic: barcode - sff

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 2 ori


text: Uppsala University

characteristic: INSDC center name

text: live

text: Generic

text: TCACGTA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 2-Ia


text: Uppsala University

text: live

text: Generic

text: TCACGAT - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 2-Ib

characteristic: title


Musa acuminata

text: NBRI

text: live

text: Generic

characteristic: NCBI submission model

text: Musa acuminata

text: Global gene expression studies in ripe and unripe fruit tissue of Banana Musa acuminata


text: Uppsala University

text: live

text: Generic

text: TCAGTCA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 2-Ic


text: Uppsala University

text: live

text: Generic

text: TCAGATC - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 2-IIa


text: Uppsala University

text: live

text: Generic

text: TCAGAGA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 2-IIb


text: Uppsala University

text: live

text: Generic

text: TCAGCTA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 2-IIc


text: Uppsala University

text: live

text: Generic

text: TCGTAGA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 2-IIIa


text: Uppsala University

text: live

text: Generic

text: TCGTGTA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 2-IIIb


text: Uppsala University

text: live

text: Generic

text: TCGATCA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 2-IIIc


text: Uppsala University

text: live

text: Generic

text: TCGACTA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 2-IVa


text: Uppsala University

text: live

text: Generic

text: TCGCATA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 2-IVb


text: Uppsala University

text: live

text: Generic

text: TGTACGA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 2-IVc


DispExp-3 ori

text: Uppsala University

text: live

text: Generic

text: TGTAGCA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 3 ori


text: Uppsala University

text: live

text: Generic

text: TGTCACA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 3-Ia


text: Uppsala University

text: live

text: Generic

text: TGTCGTA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 3-Ib


text: Uppsala University

text: live

text: Generic

text: TGTGTCA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 3-Ic


text: Uppsala University

text: live

text: Generic

text: TGTGCTA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 3-IIa


text: Uppsala University

text: live

text: Generic

text: TGATCAC - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 3-IIb


text: Uppsala University

text: live

text: Generic

text: TGACTCA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 3-IIc


text: Uppsala University

text: live

text: Generic

text: TGACACT - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 3-IIIa


text: Uppsala University

text: live

text: Generic

text: TGAGTAC - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 3-IIIb


text: Uppsala University

text: live

text: Generic

text: TGAGTCT - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 3-IIIc


text: Uppsala University

text: live

text: Generic

text: TGAGCAT - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 3-IVb


text: Uppsala University

text: live

text: Generic

text: TGCATCA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 4-Ia


text: Uppsala University

text: live

text: Generic

text: TGCACTA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 4-Ib


text: Uppsala University

text: live

text: Generic

text: ATACGCT - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 4-IIb


text: Uppsala University

text: live

text: Generic

text: ATAGCGT - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 4-IIc


text: Uppsala University

text: live

text: Generic

text: ATCTCAC - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 4-IIIa


text: Uppsala University

text: live

text: Generic

text: ATCATGC - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 4-IIIb


text: Uppsala University

text: live

text: Generic

text: ATCACTC - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 4-IIIc


text: Uppsala University

text: live

text: Generic

text: ATCACGT - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 4-IVa


text: Uppsala University

text: live

text: Generic

text: ATCAGAC - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 4-IVb


text: Uppsala University

text: live

text: Generic

text: ATCAGCT - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 4-IVc


DispExp-5 ori

text: Uppsala University

text: live

text: Generic

text: ATCGTGT - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 5 ori


text: Uppsala University

text: live

text: Generic

text: ATCGACT - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 5-Ia


text: Uppsala University

text: live

text: Generic

text: ATCGCAT - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 5-Ib


text: Uppsala University

text: live

text: Generic

text: ATGTCGT - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 5-Ic


text: Uppsala University

text: live

text: Generic

text: ATGTGCT - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 5-IIa


text: Uppsala University

text: live

text: Generic

text: ATGAGTC - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 5-IIb


text: Uppsala University

text: live

text: Generic

text: ATGAGCA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 5-IIc


text: Uppsala University

text: live

text: Generic

text: ATGCTGT - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 5-IIIa


text: Uppsala University

text: live

text: Generic

text: ATGCACT - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 5-IIIb


text: Uppsala University

text: live

text: Generic

text: ATGCGAT- HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 5-IIIc


text: Uppsala University

text: live

text: Generic

text: ACTATGC- HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 5-IVa


text: Uppsala University

text: live

text: Generic

text: ACTACAC- HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 5-IVb


text: Uppsala University

text: live

text: Generic

text: ACTACGT- HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 5-IVc


text: Uppsala University

text: live

text: Generic

text: ACTAGCT- HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 6-Ia


SEDIMENTS

text: NRCC-Biotechnology Research Institute

text: live

text: Generic

text: The Athabasca River stretches 1,231 kilometres from the Athabasca Glacier in west-central Alberta to Lake Athabasca in Northeastern Alberta. Annual mean discharge downstream of Fort McMurray is 619 cubic metres per second with a maximum of 1,010 cubic meters per second (http://www.ec.gc.ca/eau-water/, station 07DA001, accessed October 12, 2011). The direction of the flow near Fort McMurray is from the south to the north. A single large 10kg sample was taken from each of the following sites (17 samples): five sampling sites were chosen on the Athabasca River: a reference site near Fort McMurray, upstream of the oil sands mining activities (AR); near the Northland Sawmill, close to mining activities (NSM); near Suncor mining activities (DSU); near the mouth of the Muskeg River, downstream of the mining activities (MSK); and finally near the mouth of the Ells River, about 25 km downstream of the mining activities (AER). Nine other sampling sites were chosen in three of the Athabasca tributaries: upper (EU), mid (EM) and lower (EL) Ells River (slightly affected by mining activities) upper (FU), mid (FM) and lower (FL) Firebag Creek (not affected by mining activities); upper (SU), mid (SM), and lower (SL): Steepbank Creek (strongly affected by mining activities). Three samples were taken from oil sands tailings ponds: samples SY1A was taken from the Mildred Lake settling basin at about the mid-point adjacent to the east shore, SY1B was taken parallel to the east shore but further south in the basin. These positions are on a line transect that includes sites sampled by Penner and Foght (2010). Suncor 8A sediment was retrieved from a tailings pond adjacent to the Athabasca River which was considered full by 2006 and in the process of being transformed into a fine tailings drying site by 2010. The bottom of the tailings ponds consists of sand/silt/clay fractions along with some bitumen in contact with overlying waters. Although it is reasonable to consider the geological materials in a tailings pond to be sediment, particularly given that in the region natural stream beds may essentially be bitumen, we will note that the tailings being sampled would often be referred to as Mature Fine Tailings (MFT). Sampling was carried out between September 22, 2010 and September 24, 2010. At the moment of sampling, water temperature was 6.5°C. Sediment samples from the Athabasca River and its tributaries were obtained using a stainless steel shovel from shore in less than 1 m of water while the sediment samples from the tailings ponds were obtained using a long handled scoop in 1-2 m of water. Sediment samples were collected, transferred to plastic bags, excess water was removed although residual water content was retained, the bags were closed and placed in plastic pails for transport. Samples were transported in coolers to the laboratory within 48 hours, kept at 4°C and subsampled for analyses within 10 days.

text: Bacteria

text: Athabasca River sediments


text: Uppsala University

text: live

text: Generic

text: ACTCTAC- HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 6-Ib


text: Uppsala University

text: live

text: Generic

text: ACTCTCT- HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 6-Ic


DispExpRes-1 ori

text: Uppsala University

text: live

text: Generic

text: TATCGCA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R1-ori


DispExpRes-2 ori

text: Uppsala University

text: live

text: Generic

text: TACTAGC - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R2 ori


DispExpRes-3 ori

text: Uppsala University

text: live

text: Generic

text: TACTCTC - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R3 ori


DispExpRes-4 ori

text: Uppsala University

text: live

text: Generic

text: TACTCGA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R4 ori


DispExpRes-5 ori

text: Uppsala University

text: live

text: Generic

text: TACTGAC - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R5 ori


DispExpRes-6 ori

text: Uppsala University

text: live

text: Generic

text: TACTGCA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R6 ori


text: Uppsala University

text: live

text: Generic

text: TACGTCA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R1-0


text: Uppsala University

text: live

text: Generic

text: TACGAGT - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R1-1a


text: Uppsala University

text: live

text: Generic

text: TACGCTA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R1-1b


text: Uppsala University

text: live

text: Generic

text: TAGTCAC - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R1-2a


text: Uppsala University

text: live

text: Generic

text: TAGACTC - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R1-2b


text: Uppsala University

text: live

text: Generic

text: TAGACGA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R1-3a


text: Uppsala University

text: live

text: Generic

text: TAGAGAC - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R1-3b


text: Uppsala University

text: live

text: Generic

text: TAGAGCA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R1-4a


text: Uppsala University

text: live

text: Generic

text: TAGCTCA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R1-4b


text: Uppsala University

text: live

text: Generic

text: TAGCACT - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R1-5a


text: Uppsala University

text: live

text: Generic

text: TAGCAGA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R1-5b


text: Uppsala University

text: live

text: Generic

text: TAGCGTA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R1-6a


text: Uppsala University

text: live

text: Generic

text: TCTACTC - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 1-6b


text: Uppsala University

text: live

text: Generic

text: TCTCTCA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R1-7a


text: Uppsala University

text: live

text: Generic

text: TCTCATC - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R1-7b


text: Uppsala University

text: live

text: Generic

text: TCTCACT - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R1-8a


text: Uppsala University

text: live

text: Generic

text: TCTCAGA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R1-8b


DispExpRes-1-all a

text: Uppsala University

text: live

text: Generic

text: TCTGAGT - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R1-all a


DispExpRes-1-all b

text: Uppsala University

text: live

text: Generic

text: TCATAGC - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R1-all b


text: Uppsala University

text: live

text: Generic

text: TCATCTC - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R2-0


text: Uppsala University

text: live

text: Generic

text: TCATCGA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R2-1a


text: Uppsala University

text: live

text: Generic

text: TCATGAC - HH4FV4N01

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R2-1b


text: Uppsala University

text: live

text: Generic

text: TCATGCA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R2-2a


text: Uppsala University

text: live

text: Generic

text: TCACTAC - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R2-2b


text: Uppsala University

text: live

text: Generic

text: TCACTCT - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R2-3a


text: Uppsala University

text: live

text: Generic

text: TCACTGA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R2-3b


text: Shaun Mahony, Biochemistry & Molecular Biology, Penn State University

text: live

text: Generic

characteristic: cell line

characteristic: cell stage

text: Pol2-S5P (Abcam, ab5131)

characteristic: chip antibody

text: Mus musculus

text: Day2+8hrs post-RA exposure


text: Uppsala University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: TCACACA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R2-4a


text: Uppsala University

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: TCACAGT - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R2-4b


text: Uppsala University

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission package

text: TCACGTA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R2-5a


text: Uppsala University

text: live

text: Generic

text: TCACGAT - HH4FV4N01

text: Generic

text: uncultured bacterium

characteristic: organism

text: 16S rRNA gene, V3-V4, R2-5b


text: Uppsala University

text: live

text: Generic

text: TCAGTCA - HH4FV4N01

characteristic: barcode - sff file

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R2-6a


text: Uppsala University

text: live

text: Generic

text: TCAGATC - HH4FV4N01

text: Generic

characteristic: biosamplemodel

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R2-6b


characteristic: External Id

text: Uppsala University

text: live

text: Generic

text: TCAGAGA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R2-7a


text: Uppsala University

text: live

text: Generic

text: TCAGCTA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R2-7b


text: Uppsala University

text: live

text: Generic

text: TCGTAGA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R2-8a


text: Uppsala University

text: live

text: Generic

text: TCGTGTA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R2-8b


text: Philippines

characteristic: Geographic origin

text: Institute for Genome Sciences University of MD School of Medicine

text: live

characteristic: Macaque id

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 1_0

text: Vaccinated

characteristic: treatment group

characteristic: vaccine treatment


DispEcpRes-2-all a

text: Uppsala University

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

text: TCGATCA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R2-all a

characteristic: title


DispExpRes-2-all b

text: Uppsala University

characteristic: INSDC first public

text: live

text: Generic

text: TCGACTA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R2-all b


text: Uppsala University

characteristic: INSDC last update

text: live

text: Generic

text: TCGCATA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R3-0


text: Uppsala University

characteristic: INSDC secondary accession

text: live

text: Generic

text: TGTACGA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R3-1a


text: Uppsala University

text: live

text: Generic

characteristic: SRA accession

text: TGTAGCA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R3-1b


text: Uppsala University

text: live

characteristic: INSDC status

text: Generic

text: TGTCACA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R3-2a


text: Uppsala University

text: live

text: Generic

characteristic: NCBI submission package

text: TGTCGTA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R3-3b


text: Uppsala University

text: live

text: Generic

text: TGTGTCA - HH4FV4N01

text: Generic

text: uncultured bacterium

characteristic: organism

text: 16S rRNA gene, V3-V4, R3-3a


text: Uppsala University

text: live

text: Generic

text: TGTGCTA - HH4FV4N01

characteristic: barcode - sff file

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R3-3b


text: Uppsala University

text: live

text: Generic

text: TGATCAC - HH4FV4N01

text: Generic

characteristic: biosamplemodel

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R3-4a


characteristic: External Id

text: Uppsala University

text: live

text: Generic

text: TGACTCA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R3-4b


text: Uppsala University

text: live

text: Generic

text: TGACACT - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R3-5a


text: Uppsala University

text: live

text: Generic

text: TGAGTAC - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R3-5b


text: Uppsala University

text: live

text: Generic

text: TGAGTCT - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R3-6a


text: Uppsala University

text: live

text: Generic

text: TGAGTGA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R3-6b


text: Uppsala University

text: live

text: Generic

text: TGAGCAT - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R3-7a


text: Uppsala University

text: live

text: Generic

text: TGCTAGA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R3-7b


text: Uppsala University

text: live

text: Generic

text: TGCTGTA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R3-8a


text: Uppsala University

text: live

text: Generic

text: TGCATCA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R3-8b


DispExpRes-3-all a

text: Uppsala University

text: live

text: Generic

text: TGCACTA - HH4FV4N01

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R3-all a


characteristic: Geographic origin

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 10_0

text: PBS


DispExpRes-3-all b

text: Uppsala University

text: live

text: Generic

text: TGCGATA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, 3-all b


text: Uppsala University

text: live

text: Generic

text: ATACTGC - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R4-0


text: Uppsala University

text: live

text: Generic

text: ATACGCT - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R4-1a


text: Uppsala University

text: live

text: Generic

text: ATAGCGT - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R4-1b


text: Uppsala University

text: live

text: Generic

text: ATCTCAC - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R4-2a


text: Uppsala University

text: live

text: Generic

text: ATCATGC - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R4-2b


text: Uppsala University

text: live

text: Generic

text: ATCACTC - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R4-3a


text: Uppsala University

text: live

text: Generic

text: ATCACGT - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R4-3b


text: Uppsala University

text: live

text: Generic

text: ATCAGAC - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R4-4a


text: Uppsala University

text: live

text: Generic

text: ATCAGCT - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R4-4b


text: Uppsala University

text: live

text: Generic

text: ATCGTGT - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R4-5a


text: Uppsala University

text: live

text: Generic

text: ATCGACT - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R4-5b


text: Uppsala University

text: live

text: Generic

text: ATGTCGT - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R4-6a


text: Uppsala University

text: live

text: Generic

text: ATGTCGT - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R4-6b


text: Uppsala University

text: live

text: Generic

text: ATGTGCT - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R4-7a


E. coli matP-flag sample

text: Centre National de la Recherche Scientifique - Information Genomique et Structurale

text: live

text: Generic

text: Escherichia coli

text: Escherichia coli MG1657 MatP-SPA-tag genomic DNA


text: Uppsala University

text: live

text: Generic

text: ATGAGTC - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R4-7b


text: Uppsala University

text: live

text: Generic

text: ATGAGCA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R4-8a


text: Uppsala University

text: live

text: Generic

text: ATGCTGT - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R4-8b


DispExpRes-4-all a

text: Uppsala University

text: live

text: Generic

text: ATGCACT - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R4-all a


DispExpRes-4-all b

text: Uppsala University

text: live

text: Generic

text: ATGCGAT - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R4-all b


text: Uppsala University

text: live

text: Generic

text: ACTATGC - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R5-0


text: Uppsala University

text: live

text: Generic

text: ACTACAC - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R5-1a


text: Uppsala University

text: live

text: Generic

text: ACTACGT - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R5-1b


text: Uppsala University

text: live

text: Generic

text: ACTAGTC - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R5-2a


text: Uppsala University

text: live

text: Generic

text: ACTAGCT - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R5-2b


text: Uppsala University

text: live

text: Generic

text: ACTCTAC - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R5-3a


text: Uppsala University

text: live

text: Generic

text: ACTCTCT - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R5-3b


text: Uppsala University

text: live

text: Generic

text: ACTCTGA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R5-4a


text: Uppsala University

text: live

text: Generic

text: ACTCAGT - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R5-4b


text: Uppsala University

text: live

text: Generic

text: ACTCGAT - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R5-5a


text: Uppsala University

text: live

text: Generic

text: ACTGTGT - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R5-5b


text: Uppsala University

text: live

text: Generic

text: ACTGATC - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R5-6a


text: Uppsala University

text: live

text: Generic

text: ACTGACT - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R5-6b


text: Uppsala University

text: live

text: Generic

text: ACTGAGA - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R5-7a


text: Uppsala University

text: live

text: Generic

text: ACTGCAT - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R5-7b


text: Uppsala University

text: live

text: Generic

text: ACATCAC - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R5-8a


text: Uppsala University

text: live

text: Generic

text: ACACTGT - HH4FV4N01

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R5-8b


DispExpRes-5-all a

text: Uppsala University

text: live

text: Generic

text: ACACACT - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R5-all a


DispExpRes-5-all b

text: Uppsala University

text: live

text: Generic

text: TATCGCA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R5-all b


text: Uppsala University

text: live

text: Generic

text: TACTAGC - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R6-0


text: Uppsala University

text: live

text: Generic

text: TACTCTC - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R6-1a


text: Uppsala University

text: live

text: Generic

text: TACTCGA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R6-1b


text: Uppsala University

text: live

text: Generic

text: TACTGAC - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R6-2a


text: Uppsala University

text: live

text: Generic

text: TACTGCA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R6-2b


text: Uppsala University

text: live

text: Generic

text: TACGTCA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R6-3a


text: Uppsala University

text: live

text: Generic

text: TACGAGT - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R6-3b


text: Uppsala University

text: live

text: Generic

text: TACGCTA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R6-4a


text: Uppsala University

text: live

text: Generic

text: TAGTCAC - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R6-4b


text: Uppsala University

text: live

text: Generic

text: TAGACTC - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R6-5a


text: Uppsala University

text: live

text: Generic

text: TAGACGA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R6-5b


text: Uppsala University

text: live

text: Generic

text: TAGAGAC - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R6-6a


text: Uppsala University

text: live

text: Generic

text: TAGAGCA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R6-6b


text: Uppsala University

text: live

text: Generic

text: TAGCTCA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R6-7a


text: Uppsala University

text: live

text: Generic

text: TAGCACT - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R6-7b


text: Uppsala University

text: live

text: Generic

text: TAGCAGA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R6-8a


text: Uppsala University

text: live

text: Generic

text: TAGCGTA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R6-8b


DispExpRes-6-all a

text: Uppsala University

text: live

text: Generic

text: TCTACTC - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R6-all a


DispExpRes-6-all b

text: Uppsala University

text: live

text: Generic

text: TCTCTCA - HH4FV4N02

text: Generic

text: uncultured bacterium

text: 16S rRNA gene, V3-V4, R6-all b


text: live

text: Generic

text: Ainv15 (ATCC SCRC-1029) with inducible V5-tagged Olig2

characteristic: cell line

text: progenitor motor neurons (Day4 directed differentiation)

characteristic: cell stage

text: anti-V5 (Abcam, ab15828)

characteristic: chip antibody

text: Mus musculus

text: Pseudo IP against V5

text: Pseudo-ChIP control using anti-V5 in progenitor motor neurons (Day_4)


characteristic: INSDC center name

text: live

text: Generic

text: anti-V5 (Abcam, ab15828)

text: Mus musculus

text: Pseudo IP against V5

text: Pseudo-ChIP control using anti-V5 in progenitor motor neurons (Day_4 )


text: Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences

text: live

text: Generic

characteristic: NCBI submission model

text: Indian

characteristic: description

text: Cucumis sativus

text: A cucumber genomic variation map reveals the impact of human selection


characteristic: INSDC first public

text: live

text: Generic

text: East Asian

text: Cucumis sativus

characteristic: title


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Eurasian

text: Cucumis sativus


text: live

characteristic: INSDC status

text: Generic

characteristic: SRA accession

text: Xishuangbanna

text: Cucumis sativus


text: live

text: Generic

characteristic: NCBI submission package

text: Ainv15 (ATCC SCRC-1029)

text: WCE

text: Mus musculus

characteristic: organism

text: Day5 motor neurons


text: Philippines

text: live

characteristic: Macaque id

text: Generic

text: Generic

characteristic: biosamplemodel

characteristic: day

text: gut metagenome

text: gut metagenome 7_14

text: Vaccinated

characteristic: treatment group

characteristic: vaccine treatment


characteristic: External Id

text: Philippines

characteristic: Geographic origin

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 6_14

text: Vaccinated


text: Philippines

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

text: Generic

text: gut metagenome

text: gut metagenome 7_0

text: Vaccinated


text: Philippines

characteristic: INSDC first public

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 1_1

text: Vaccinated


text: Philippines

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 1_7

characteristic: title

text: Vaccinated


text: Philippines

characteristic: INSDC last update

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 3_0

text: Vaccinated


text: Philippines

characteristic: INSDC secondary accession

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 3_7

text: Vaccinated


text: live

characteristic: INSDC status

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 5_0

text: Vaccinated


text: Philippines

text: live

text: Generic

characteristic: SRA accession

text: Generic

text: gut metagenome

text: gut metagenome 4_14

text: Vaccinated


text: Philippines

text: live

text: Generic

characteristic: NCBI submission package

text: Generic

text: gut metagenome

text: gut metagenome 6_1

text: Vaccinated


text: Philippines

text: live

text: Generic

text: Generic

text: gut metagenome

characteristic: organism

text: gut metagenome 6_0

text: Vaccinated


text: Indochina

text: live

characteristic: Macaque id

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 9_7

text: PBS


text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: gut metagenome

text: gut metagenome 2_7

text: Vaccinated


text: Philippines

text: live

text: Generic

text: Generic

characteristic: day

text: gut metagenome

text: gut metagenome 1_2

text: Vaccinated


text: Philippines

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 3_14

text: Vaccinated

characteristic: treatment group


text: Philippines

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 4_0

text: Vaccinated

characteristic: vaccine treatment


characteristic: External Id

text: Philippines

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 4_7

text: Vaccinated


text: Indochina

characteristic: Geographic origin

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 8_14

text: Vaccinated

text: PBS


text: Indochina

characteristic: INSDC center name

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 9_2

text: PBS


text: Philippines

text: live

text: Generic

characteristic: NCBI submission model

text: Generic

text: gut metagenome

text: gut metagenome 6_7

text: Vaccinated


text: Philippines

characteristic: INSDC first public

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 6_2

text: Vaccinated


text: Indochina

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 9_14

characteristic: title

text: PBS


text: Philippines

characteristic: INSDC last update

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 3_1

text: Vaccinated


characteristic: INSDC secondary accession

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 2_14

text: Vaccinated


text: live

characteristic: INSDC status

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 5_1

text: Vaccinated


text: Philippines

text: live

text: Generic

characteristic: SRA accession

text: Generic

text: gut metagenome

text: gut metagenome 3_2

text: Vaccinated


text: Indochina

text: live

text: Generic

characteristic: NCBI submission package

text: Generic

text: gut metagenome

text: gut metagenome 9_0

text: PBS


text: Philippines

text: live

text: Generic

text: Generic

text: gut metagenome

characteristic: organism

text: gut metagenome 7_2

text: Vaccinated


text: Philippines

text: live

characteristic: Macaque id

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 7_7

text: Vaccinated


text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: gut metagenome

text: gut metagenome 2_0

text: Vaccinated


text: live

text: Generic

text: Generic

characteristic: day

text: gut metagenome

text: gut metagenome 2_1

text: Vaccinated


text: Philippines

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 4_1

text: Vaccinated

characteristic: treatment group


text: Philippines

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 7_1

text: Vaccinated

characteristic: vaccine treatment


characteristic: External Id

text: Philippines

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 1_14

text: Vaccinated


characteristic: Geographic origin

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 2_2

text: Vaccinated


text: Philippines

characteristic: INSDC center name

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 4_2

text: Vaccinated


text: Indochina

text: live

text: Generic

characteristic: NCBI submission model

text: Generic

text: gut metagenome

text: gut metagenome 9_1

text: PBS


characteristic: INSDC first public

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 5_7

text: Vaccinated


text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 5_14

characteristic: title

text: Vaccinated


characteristic: INSDC last update

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 11_0

text: PBS


text: Mauritius

characteristic: INSDC secondary accession

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 20_4


text: live

characteristic: INSDC status

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 5_2

text: Vaccinated


text: live

text: Generic

characteristic: SRA accession

text: Generic

text: gut metagenome

text: gut metagenome 11_14

text: PBS


text: live

text: Generic

characteristic: NCBI submission package

text: Generic

text: gut metagenome

text: gut metagenome 10_7

text: PBS


text: live

text: Generic

text: Generic

text: gut metagenome

characteristic: organism

text: gut metagenome 10_2

text: PBS


text: live

characteristic: Macaque id

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 10_1

text: PBS


text: Indochina

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: gut metagenome

text: gut metagenome 8_1

text: Vaccinated

text: PBS


text: Mauritius

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 20_0


text: Mauritius

text: live

text: Generic

text: Generic

characteristic: day

text: gut metagenome

text: gut metagenome 20_2


text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 11_2

characteristic: treatment group

text: PBS


text: Mauritius

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 20_28

characteristic: vaccine treatment


characteristic: External Id

text: Indochina

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 8_0

text: Vaccinated

text: PBS


text: Mauritius

characteristic: Geographic origin

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 20_10


text: Indochina

characteristic: INSDC center name

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 8_7

text: Vaccinated

text: PBS


text: live

text: Generic

characteristic: NCBI submission model

text: Generic

text: gut metagenome

text: gut metagenome 11_1

text: PBS


text: Indochina

characteristic: INSDC first public

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 8_2

text: Vaccinated

text: PBS


text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 10_14

characteristic: title

text: PBS


text: Mauritius

characteristic: INSDC last update

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 20_30


text: Indochina

characteristic: INSDC secondary accession

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 12_0

text: PBS


text: Indochina

text: live

characteristic: INSDC status

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 12_1

text: PBS


text: Indochina

text: live

text: Generic

characteristic: SRA accession

text: Generic

text: gut metagenome

text: gut metagenome 12_2

text: PBS


text: Indochina

text: live

text: Generic

characteristic: NCBI submission package

text: Generic

text: gut metagenome

text: gut metagenome 12_7

text: PBS


text: Mauritius

text: live

text: Generic

text: Generic

text: gut metagenome

characteristic: organism

text: gut metagenome 21_30


text: Mauritius

text: live

characteristic: Macaque id

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 20_7


text: Mauritius

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: gut metagenome

text: gut metagenome 21_0


text: Mauritius

text: live

text: Generic

text: Generic

characteristic: day

text: gut metagenome

text: gut metagenome 21_10


text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 11_7

characteristic: treatment group

text: PBS


text: Mauritius

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 21_2

characteristic: vaccine treatment


characteristic: External Id

text: Mauritius

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 21_28


text: Indochina

characteristic: Geographic origin

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 12_14

text: PBS


text: Mauritius

characteristic: INSDC center name

text: live

text: Generic

text: Generic

text: final

text: gut metagenome

text: gut metagenome 20_final


text: Mauritius

text: live

text: Generic

characteristic: NCBI submission model

text: Generic

text: gut metagenome

text: gut metagenome 21_7


text: Mauritius

characteristic: INSDC first public

text: live

text: Generic

text: Generic

text: final

text: gut metagenome

text: gut metagenome 21_final


text: Mauritius

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 21_4

characteristic: title


text: Mauritius

characteristic: INSDC last update

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 22_0


text: Mauritius

characteristic: INSDC secondary accession

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 22_10


text: Mauritius

text: live

characteristic: INSDC status

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 22_2


text: Mauritius

text: live

text: Generic

characteristic: SRA accession

text: Generic

text: gut metagenome

text: gut metagenome 22_4


text: Mauritius

text: live

text: Generic

characteristic: NCBI submission package

text: Generic

text: gut metagenome

text: gut metagenome 22_7


text: Mauritius

text: live

text: Generic

text: Generic

text: gut metagenome

characteristic: organism

text: gut metagenome 22_28


text: Mauritius

text: live

characteristic: Macaque id

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 22_30


text: Mauritius

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: gut metagenome

text: gut metagenome 23_0


text: Mauritius

text: live

text: Generic

text: Generic

text: final

characteristic: day

text: gut metagenome

text: gut metagenome 24_final

text: PBS


text: Mauritius

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 24_30

characteristic: treatment group

text: PBS


text: Mauritius

text: live

text: Generic

text: Generic

text: gut metagenome

text: gut metagenome 24_28

text: PBS

characteristic: vaccine treatment


characteristic: External Id

text: Mauritius

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