text: ENCODE DCC

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: ATCC

characteristic: biomaterial provider

characteristic: cell

text: cervical carcinoma

characteristic: cell description

text: cancer

text: ectoderm

text: human

text: F

text: RepliSeq

text: Assessment of DNA Replication Timing

text: UW

text: Homo sapiens

characteristic: organism

characteristic: title


status: PUBLIC

characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM12813

tag: attribute

text: B-Lymphocyte, Lymphoblastoid, International HapMap Project, CEPH/Utah, Treatment: Epstein-Barr Virus transformed

text: normal

characteristic: cell karyotype

text: mesoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: F

characteristic: cell sex

text: RepliSeq

characteristic: datatype

text: Assessment of DNA Replication Timing

characteristic: datatype description

text: UW

characteristic: lab

text: Stamatoyannopoulous - University of Washington

characteristic: lab description

characteristic: labexpid

text: Homo sapiens

characteristic: phase

text: Flow sorted, G1b phase corresponds to the second half of the first DNA content window

characteristic: phase description

characteristic: replicate


text: ENCODE DCC

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM12878

characteristic: biomaterial provider

characteristic: cell

text: lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus

characteristic: cell description

text: normal

text: mesoderm

text: human

text: F

text: RepliSeq

text: Assessment of DNA Replication Timing

text: UW

text: Homo sapiens

characteristic: organism

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

text: Lonza

text: HUVEC

text: umbilical vein endothelial cells

text: normal

characteristic: cell karyotype

text: mesoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: U

characteristic: cell sex

text: RepliSeq

characteristic: datatype

text: Assessment of DNA Replication Timing

characteristic: datatype description

text: UW

text: Homo sapiens

text: HUVEC


text: ENCODE DCC

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: BresaGen, Inc.

text: embryonic stem cell (hESC), BG02, treatment: H9 conditioned medium

text: normal

text: inner cell mass

text: human

text: M

text: RepliSeq

text: Assessment of DNA Replication Timing

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Homo sapiens

characteristic: phase

characteristic: phase description

characteristic: replicate


characteristic: External Id

text: The Salk Institute for Biological Studies

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Genome sequence from Chat-1

characteristic: description

text: Arabidopsis thaliana

characteristic: organism

characteristic: title


text: University of Colorado, Boulder

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: embryonic day 14

characteristic: age

text: Mus musculus

text: Epidermal progenitor cells

characteristic: strain

text: epidermis, basal cells

characteristic: tissue

text: E14 basal 3Seq


text: University of Colorado, Boulder

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: embryonic day 14

text: Mus musculus

text: Epidermal progenitor cells

text: epidermis, suprabasal cells

text: E14 suprabasal 3Seq


text: University of Colorado, Boulder

text: live

text: Generic

text: postnatal day 4

text: Mus musculus

text: Hair follicle cells

text: hair follicle

text: P4 hair follicle 3Seq


text: University of Colorado, Boulder

text: live

text: Generic

text: neonatal

text: Mus musculus

characteristic: passage

text: Low passage in vitro cultured primary keratinocytes

text: primary keratinocytes isolated from back skin

text: Primary keratinocytes sample 1


text: University of Colorado, Boulder

text: live

text: Generic

text: neonatal

text: Mus musculus

text: Primary keratinocytes sample 2


text: ENCODE DCC

text: live

text: Generic

text: Embryonic day 0 (stem cell)

characteristic: age description

text: Input

characteristic: antibody

text: Control signal which may be subtracted from experimental raw signal before peaks are called.

characteristic: antibody description

text: Mitch Weiss lab

characteristic: biomaterial provider

characteristic: cell

text: Gata1 restored erythroid cells, differentiation induced by estradiol (E2)

characteristic: cell description

text: mouse

characteristic: cell organism

text: M

characteristic: cell sex

text: Input

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: PSU-m

characteristic: lab

text: Hardison - Penn State University

characteristic: lab description

characteristic: labversion

text: Mus musculus

characteristic: replicate

text: Strain 129, has widely available embryonic stem cells

characteristic: strain description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: immortalized

characteristic: age

text: Immortal cells

characteristic: age description

text: CTCF

characteristic: antibody

text: rabbit polyclonal. Antibody Target: CTCF

characteristic: antibody antibodydescription

text: CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Millipore

characteristic: antibody vendorname

text: Weissman lab

text: B-cell lymphoma (GM12878 analog)

text: mouse

text: F

text: Input

text: ChipSeq

text: Chromatin IP Sequencing

text: PSU-m

text: Hardison - Penn State University

text: Mus musculus

characteristic: organism

characteristic: strain

text: Derived by inbreeding from selected F2 progeny of B10.A X B10.129

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: immortalized

text: Immortal cells

text: Input

characteristic: antibody description

text: Weissman lab

characteristic: biomaterial provider

characteristic: cell

text: B-cell lymphoma (GM12878 analog)

characteristic: cell description

text: mouse

characteristic: cell organism

text: F

characteristic: cell sex

text: Input

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: PSU-m

characteristic: lab

text: Hardison - Penn State University

characteristic: lab description

text: Mus musculus

characteristic: replicate

characteristic: strain description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

text: Embryonic day 0 (stem cell)

characteristic: age description

text: CTCF

characteristic: antibody

characteristic: antibody antibodydescription

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Millipore

characteristic: antibody vendorname

text: Mitch Weiss lab

text: Gata1- erythroid progenitor

text: mouse

text: M

text: Input

text: ChipSeq

text: Chromatin IP Sequencing

text: PSU-m

text: Hardison - Penn State University

text: Mus musculus

characteristic: organism

characteristic: strain

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Embryonic day 0 (stem cell)

text: CTCF

text: Millipore

text: Mitch Weiss lab

characteristic: biomaterial provider

characteristic: cell

characteristic: cell description

text: mouse

characteristic: cell organism

text: M

characteristic: cell sex

text: Input

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: PSU-m

characteristic: lab

text: Hardison - Penn State University

characteristic: lab description

characteristic: labversion

text: Mus musculus

characteristic: replicate

characteristic: strain description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

text: Embryonic day 0 (stem cell)

characteristic: age description

characteristic: antibody

text: rat monoclonal antibody raised against mouse recombinant GATA1; recommended for detection of GATA1 of mouse, rat and human origin. Antibody Target: GATA1

characteristic: antibody antibodydescription

text: GATA1 is erythroid-specific and is responsible for the regulated transcription of erythroid genes.

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotech

characteristic: antibody vendorname

text: Mitch Weiss lab

text: mouse

text: M

text: Input

text: ChipSeq

text: Chromatin IP Sequencing

text: PSU-m

text: Hardison - Penn State University

text: Mus musculus

characteristic: organism

characteristic: strain

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: immortalized

text: Immortal cells

text: CTCF

text: Millipore

text: Weissman lab

characteristic: biomaterial provider

text: MEL

characteristic: cell

text: Leukemia (K562 analog)

characteristic: cell description

text: mouse

characteristic: cell organism

text: M

characteristic: cell sex

text: Input

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: PSU-m

characteristic: lab

text: Hardison - Penn State University

characteristic: lab description

text: Mus musculus

characteristic: replicate

text: MEL

text: C57 black 6, the most common inbred strain of laboratory mouse

characteristic: strain description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: immortalized

characteristic: age

text: Immortal cells

characteristic: age description

text: Input

characteristic: antibody

characteristic: antibody description

text: Weissman lab

text: MEL

text: Leukemia (K562 analog)

text: mouse

text: U

text: Input

text: ChipSeq

text: Chromatin IP Sequencing

text: PSU-m

text: Hardison - Penn State University

text: Mus musculus

characteristic: organism

text: MEL

characteristic: strain

characteristic: title


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Embryonic day 14.5

characteristic: antibody antibodydescription

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotech

characteristic: antibody vendorname

text: Mitch Weiss lab

characteristic: biomaterial provider

text: Erythrobl

characteristic: cell

text: Erythroblast, ter119+ cells from liver

characteristic: cell description

text: mouse

characteristic: cell organism

text: B

characteristic: cell sex

text: Input

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: PSU-m

characteristic: lab

text: Hardison - Penn State University

characteristic: lab description

text: Mus musculus

text: Erythrobl

text: Multipurpose mouse used for safety testing, aging studies, surgical models and pseudopregnancy.


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

text: Embryonic day 0 (stem cell)

characteristic: age description

characteristic: antibody

text: goat polyclonal antibody; epitope mapping at the C-terminus of TAL1 of human origin, recommended for detection of TAL1 of mouse, rat and human origin. Antibody Target: TAL1

text: TAL1 (also designated SCL) is a serine phosphoprotein and basic helix-loop-helix transcription factor known to regulate embryonic hematopoiesis.

text: Santa Cruz Biotech

text: Mitch Weiss lab

text: mouse

text: M

text: Input

text: ChipSeq

text: Chromatin IP Sequencing

text: PSU-m

text: Hardison - Penn State University

text: Mus musculus

characteristic: organism

characteristic: replicate

characteristic: strain

characteristic: strain description

characteristic: title


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

text: immortalized

text: Immortal cells

text: Mouse monoclonal to RNA polymerase II CTD repeat YSPTSPS antibody (4H8) - ChIP Grade. Antibody Target: POL24H8

characteristic: antibody antibodydescription

text: This gene encodes the largest subunit of RNA polymerase II, the polymerase responsible for synthesizing messenger RNA in eukaryotes

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Abcam

characteristic: antibody vendorname

text: Weissman lab

characteristic: biomaterial provider

text: MEL

characteristic: cell

text: Leukemia (K562 analog)

characteristic: cell description

text: mouse

characteristic: cell organism

text: U

characteristic: cell sex

text: Input

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: PSU-m

characteristic: lab

text: Hardison - Penn State University

characteristic: lab description

text: Mus musculus

text: MEL


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: immortalized

characteristic: age

text: Immortal cells

characteristic: age description

characteristic: antibody

text: Santa Cruz Biotech

text: Weissman lab

text: MEL

text: Leukemia (K562 analog)

text: mouse

text: U

text: Input

text: ChipSeq

text: Chromatin IP Sequencing

text: PSU-m

text: Hardison - Penn State University

text: Mus musculus

characteristic: organism

characteristic: replicate

text: MEL

characteristic: strain

characteristic: strain description

characteristic: title


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

text: Embryonic day 0 (stem cell)

characteristic: antibody antibodydescription

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotech

characteristic: antibody vendorname

text: Mitch Weiss lab

characteristic: biomaterial provider

characteristic: cell

text: Gata1- erythroid progenitor

characteristic: cell description

text: mouse

characteristic: cell organism

text: M

characteristic: cell sex

text: Input

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: PSU-m

characteristic: lab

text: Hardison - Penn State University

characteristic: lab description

text: Mus musculus


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

text: Embryonic day 0 (stem cell)

characteristic: age description

text: Input

characteristic: antibody

characteristic: antibody description

text: Mitch Weiss lab

text: Gata1- erythroid progenitor

text: mouse

text: M

text: Input

text: ChipSeq

text: Chromatin IP Sequencing

text: PSU-m

text: Hardison - Penn State University

text: Mus musculus

characteristic: organism

characteristic: replicate

characteristic: strain

characteristic: strain description

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

text: live

text: Generic

text: Embryonic day 0 (stem cell)

characteristic: antibody antibodydescription

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotech

characteristic: antibody vendorname

text: Mitch Weiss lab

characteristic: biomaterial provider

characteristic: cell

text: Gata1- erythroid progenitor

characteristic: cell description

text: mouse

characteristic: cell organism

text: M

characteristic: cell sex

text: Input

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: PSU-m

characteristic: lab

text: Hardison - Penn State University

characteristic: lab description

text: Mus musculus


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

text: Embryonic day 14.5

characteristic: age description

characteristic: antibody

text: Santa Cruz Biotech

text: Mitch Weiss lab

text: Erythrobl

text: Erythroblast, ter119+ cells from liver

text: mouse

text: B

text: Input

text: ChipSeq

text: Chromatin IP Sequencing

text: PSU-m

text: Hardison - Penn State University

text: Mus musculus

characteristic: organism

characteristic: replicate

text: Erythrobl

characteristic: strain

characteristic: strain description

characteristic: title


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

text: Embryonic day 14.5

text: Input

characteristic: antibody description

text: Mitch Weiss lab

characteristic: biomaterial provider

text: Megakaryo

characteristic: cell

text: Megakaryocyte

characteristic: cell description

text: mouse

characteristic: cell organism

text: B

characteristic: cell sex

text: Input

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: PSU-m

characteristic: lab

text: Hardison - Penn State University

characteristic: lab description

text: Mus musculus

text: Megakaryo


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: immortalized

characteristic: age

text: Immortal cells

characteristic: age description

characteristic: antibody

text: rabbit polyclonal antibody; epitope is a synthetic peptide: MDLEKNYPTPRTSRT, corresponding to amino acids 1-15 of Human PAX5, cross-reacts with human and mouse PAX5. Antibody Target: PAX5

characteristic: antibody antibodydescription

text: The PAX5 gene is a member of the paired box (PAX) family of transcription factors. The central feature of this gene family is a novel, highly conserved DNA binding motif, known as the paired box. The PAX proteins are important regulators in early development, and alterations in the expression of their genes are thought to contribute to neoplastic transformation. The PAX5 gene encodes the B cell lineage specific activator protein (BSAP) that is expressed at early, but not late stages of B cell differentiation.

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Abcam

characteristic: antibody vendorname

text: Weissman lab

text: B-cell lymphoma (GM12878 analog)

text: mouse

text: F

text: Input

text: ChipSeq

text: Chromatin IP Sequencing

text: PSU-m

text: Hardison - Penn State University

text: Mus musculus

characteristic: organism

characteristic: replicate

characteristic: strain


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Embryonic day 14.5

text: Input

characteristic: antibody description

text: Mitch Weiss lab

characteristic: biomaterial provider

text: Erythrobl

characteristic: cell

text: Erythroblast, ter119+ cells from liver

characteristic: cell description

text: mouse

characteristic: cell organism

text: B

characteristic: cell sex

text: Input

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: PSU-m

characteristic: lab

text: Hardison - Penn State University

characteristic: lab description

text: Mus musculus

text: Erythrobl

characteristic: strain description

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

text: Embryonic day 14.5

characteristic: age description

characteristic: antibody

characteristic: antibody antibodydescription

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotech

characteristic: antibody vendorname

text: Mitch Weiss lab

text: Megakaryo

text: Megakaryocyte

text: mouse

text: B

text: Input

text: ChipSeq

text: Chromatin IP Sequencing

text: PSU-m

text: Hardison - Penn State University

text: Mus musculus

characteristic: organism

characteristic: replicate

text: Megakaryo

characteristic: strain


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Embryonic day 0 (stem cell)

text: Rabbit polyclonal antibody raised against amino acids 120-235 of GATA-2 of human origin. Antibody Target: GATA2

text: The GATA family of transcription factors share a conserved zinc finger DNA-binding domain and are capable of binding the WGATAR consensus sequence. GATA1 is erythroid-specific and is essential for normal erythropeisis. By comparison, GATA2 is expressed at high levels in hematopoeitic progenitors, including early erythroid cells, but is strong repressed during erythroblast differentiaion.

text: Santa Cruz Biotech

text: Mitch Weiss lab

characteristic: biomaterial provider

characteristic: cell

text: Gata1- erythroid progenitor

characteristic: cell description

text: mouse

characteristic: cell organism

text: M

characteristic: cell sex

text: Input

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: PSU-m

characteristic: lab

text: Hardison - Penn State University

characteristic: lab description

text: Mus musculus

characteristic: strain description

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

text: Embryonic day 0 (stem cell)

characteristic: age description

characteristic: antibody

characteristic: antibody antibodydescription

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotech

characteristic: antibody vendorname

text: Mitch Weiss lab

text: Gata1 restored erythroid cells, differentiation induced by estradiol (E2)

text: mouse

text: M

text: Input

text: Control signal which may be subtracted from experimental raw signal before peaks are called.

text: ChipSeq

text: Chromatin IP Sequencing

text: PSU-m

text: Hardison - Penn State University

text: Mus musculus

characteristic: organism

characteristic: replicate

characteristic: strain


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Embryonic day 0 (stem cell)

text: Abcam

text: Mitch Weiss lab

characteristic: biomaterial provider

characteristic: cell

text: Gata1- erythroid progenitor

characteristic: cell description

text: mouse

characteristic: cell organism

text: M

characteristic: cell sex

text: Input

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: PSU-m

characteristic: lab

text: Hardison - Penn State University

characteristic: lab description

text: Mus musculus

text: Strain 129, has widely available embryonic stem cells

characteristic: strain description

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

text: Embryonic day 0 (stem cell)

characteristic: age description

characteristic: antibody

characteristic: antibody antibodydescription

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Abcam

characteristic: antibody vendorname

text: Mitch Weiss lab

text: mouse

text: M

text: Input

text: ChipSeq

text: Chromatin IP Sequencing

text: PSU-m

text: Hardison - Penn State University

text: Mus musculus

characteristic: organism

characteristic: replicate

characteristic: strain


name: 1132618988141 Sally gDNA, muscle 3KBSALMON-MP-ILI53-1 Sample

characteristic: External Id

text: J. Craig Venter Institute

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Sally muscle

characteristic: description

text: Salmo salar

text: Generic sample from Salmo salar

characteristic: title


PRJNA172113.Enterococcus faecium UAA719

text: Broad Institute

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Generic

characteristic: biosamplemodel

text: Enterococcus faecium EnGen0162

text: Enterococcus faecium UAA719

characteristic: sample name

text: Generic sample from Enterococcus faecium UAA719


text: Broad Institute

text: live

text: Generic

characteristic: SRA accession

text: Generic

text: human gut metagenome

text: Generic sample from unclassified Bacteria (miscellaneous)


name: PRJNA172113.Enterococcus faecium VAN 335

text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecium EnGen0174

text: Enterococcus faecium VAN 335

text: VAN 335

text: Generic sample from Enterococcus faecium VAN 335


PRJNA172113.Enterococcus faecium UAA825

text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecium EnGen0169

text: Enterococcus faecium UAA825

text: Generic sample from Enterococcus faecium UAA825


PRJNA172113.Enterococcus faecium UAA716

text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecium EnGen0160

text: Enterococcus faecium UAA716

text: Generic sample from Enterococcus faecium UAA716


name: 608166.10772.Genomic DNA.Enterococcus faecalis B1376

text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecalis B1376

characteristic: collaborator sample id

text: Enterococcus faecalis EnGen0069

text: Genomic DNA

characteristic: sample type

text: Other

characteristic: sex

text: Enterococcus faecalis B1376 Genomic DNA sample Enterococcus faecalis B1376


name: 608166.10772.Genomic DNA.Entercoccus faecalis B56765

text: Broad Institute

text: live

text: Generic

text: Generic

text: Entercoccus faecalis B56765

text: Enterococcus faecalis EnGen0061

characteristic: organism

text: Genomic DNA

text: Other

characteristic: strain

text: Enterococcus faecalis B56765 Genomic DNA sample Entercoccus faecalis B56765


characteristic: External Id

text: Broad Institute

characteristic: INSDC center name

text: live

text: Generic

text: Generic

text: Enterococcus faecium EnGen0184

text: Enterococcus faecium F9730129-1

text: Generic sample from Enterococcus faecium F9730129-1


PRJNA172113.Enterococcus faecalis B2211

text: Broad Institute

characteristic: INSDC first public

text: live

text: Generic

text: Generic

text: Enterococcus faecalis EnGen0201

text: Enterococcus faecalis B2211

text: Generic sample from Enterococcus faecalis B2211


PRJNA172113.Enterococcus faecium H17575

text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecium EnGen0151

text: Enterococcus faecium H17575

text: Generic sample from Enterococcus faecium H17575

characteristic: title


PRJNA172113.Enterococcus faecium UAA715

text: Broad Institute

characteristic: INSDC last update

text: live

text: Generic

text: Generic

text: Enterococcus faecium EnGen0159

text: Enterococcus faecium UAA715

text: Generic sample from Enterococcus faecium UAA715


name: 608166.10772.Genomic DNA.Enterococcus faecalis 7330948-5

text: Broad Institute

characteristic: INSDC secondary accession

text: live

text: Generic

text: Generic

text: Enterococcus faecalis 7330948-5

text: Enterococcus faecalis EnGen0082

text: Genomic DNA

text: Other

text: Enterococcus faecalis 7330948-5 Genomic DNA sample Enterococcus faecalis 7330948-5


PRJNA172113.Enterococcus faecalis B2802

text: Broad Institute

text: live

characteristic: INSDC status

text: Generic

text: Generic

text: Enterococcus faecalis EnGen0205

text: Enterococcus faecalis B2802

text: Generic sample from Enterococcus faecalis B2802


text: Broad Institute

text: live

text: Generic

characteristic: NCBI submission model

text: Generic

text: Enterococcus faecium EnGen0155

text: Enterococcus faecium KH36syn

text: Generic sample from Enterococcus faecium KH36syn


name: PRJNA172113.Enterococcus faecium VAN 342

text: Broad Institute

text: live

text: Generic

characteristic: NCBI submission package

text: Generic

text: Enterococcus faecium EnGen0175

text: Enterococcus faecium VAN 342

text: VAN 342

text: Generic sample from Enterococcus faecium VAN 342


name: 608166.10772.Genomic DNA.Entercoccus faecalis B15725

text: Broad Institute

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: Entercoccus faecalis B15725

text: Enterococcus faecalis EnGen0065

text: Genomic DNA

text: Other

text: Enterococcus faecalis B15725 Genomic DNA sample Entercoccus faecalis B15725


PRJNA172113.Enterococcus faecalis B2202

text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecalis EnGen0200

text: Enterococcus faecalis B2202

characteristic: sample name

text: Generic sample from Enterococcus faecalis B2202


PRJNA172113.Enterococcus faecalis B2277

text: Broad Institute

text: live

text: Generic

characteristic: SRA accession

text: Generic

text: Enterococcus faecalis EnGen0202

text: Enterococcus faecalis B2277

text: Generic sample from Enterococcus faecalis B2277


text: Broad Institute

text: live

text: Generic

text: Generic

text: human gut metagenome

text: Generic sample from unclassified Bacteria (miscellaneous)


name: 608166.10772.Genomic DNA.Enterococcus faecalis 182970

text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecalis 182970

characteristic: collaborator sample id

text: Enterococcus faecalis EnGen0074

text: Genomic DNA

text: Other

text: Enterococcus faecalis 182970 Genomic DNA sample Enterococcus faecalis 182970


name: PRJNA172113.Enterococcus faecium VAN 219

text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecium EnGen0171

text: Enterococcus faecium VAN 219

text: VAN 219

text: Generic sample from Enterococcus faecium VAN 219


text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecium EnGen0138

text: Enterococcus faecium 9830091-5

text: Generic sample from Enterococcus faecium 9830091-5


PRJNA172113.Enterococcus faecalis B2864

text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecalis EnGen0206

text: Enterococcus faecalis B2864

text: Generic sample from Enterococcus faecalis B2864


PRJNA172113.Enterococcus faecium UAA714

text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecium EnGen0158

text: Enterococcus faecium UAA714

text: Generic sample from Enterococcus faecium UAA714


name: 608166.10772.Genomic DNA.Enterococcus faecium K36syn

text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecium K36syn

text: Enterococcus sp. EnGen0154

text: Genomic DNA

characteristic: sample type

text: Other

text: Enterococcus faecium K36syn Genomic DNA sample Enterococcus faecium K36syn


PRJNA172113.Enterococcus faecalis B1933

text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecalis EnGen0199

text: Enterococcus faecalis B1933

text: Generic sample from Enterococcus faecalis B1933


PRJNA172113.Enterococcus faeciumUAA911

text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecium EnGen0183

text: Enterococcus faeciumUAA911

text: Generic sample from Enterococcus faecium UAA911


PRJNA172113.Enterococcus faecium S658-3

text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecium EnGen0156

text: Enterococcus faecium S658-3

text: Generic sample from Enterococcus faecium S658-3


PRJNA172113.Enterococcus faecium UAA944

text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecium EnGen0170

text: Enterococcus faecium UAA944

text: Generic sample from Enterococcus faecium UAA944


PRJNA172113.Enterococcus faecalis B2867

text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecalis EnGen0374

text: Enterococcus faecalis B2867

text: Generic sample from Enterococcus faecalis B2867


PRJNA172113.Enterococcus faecium E8sv3

text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecium EnGen0148

text: Enterococcus faecium E8sv3

text: Generic sample from Enterococcus faecium E8sv3


name: 608166.10772.Genomic DNA.Enterococcus faecium 9830587-1

text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecium 9830587-1

text: Enterococcus faecium EnGen0143

text: Genomic DNA

text: Other

characteristic: sex

text: Enterococcus faecium 9830587-1 Genomic DNA sample Enterococcus faecium 9830587-1


text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecium EnGen0145

characteristic: organism

text: Enterococcus faecium 9930238-2

text: Generic sample from Enterococcus faecium 9930238-2


name: PRJNA172113.Enterococcus faecium VRE 108

text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecium EnGen0177

text: Enterococcus faecium VRE 108

text: VRE 108

characteristic: strain

text: Generic sample from Enterococcus faecium VRE 108


name: 608166.10772.Genomic DNA.Enterococcus faecium 9830770-1

characteristic: External Id

text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecium EnGen0144

text: Enterococcus faecium 9830770-1

characteristic: sample id

text: Genomic DNA

text: Other

text: Enterococcus faecium 9830770-1 Genomic DNA sample Enterococcus faecium 9830770-1


name: 608166.10772.Genomic DNA.Entercoccus faecalis B16457

text: Broad Institute

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Generic

text: Entercoccus faecalis B16457

text: Enterococcus faecalis EnGen0062

text: Genomic DNA

text: Other

text: Enterococcus faecalis B16457 Genomic DNA sample Entercoccus faecalis B16457


name: 608166.10772.Genomic DNA.Enterococcus faecium 9830559-1

text: Broad Institute

characteristic: INSDC last update

text: live

text: Generic

text: Generic

text: Enterococcus faecium 9830559-1

text: Enterococcus faecium EnGen0141

text: Genomic DNA

text: Other

text: Enterococcus faecium 9830559-1 Genomic DNA sample Enterococcus faecium 9830559-1

characteristic: title


name: 608166.10772.Genomic DNA.Enterococcus faecalis 7330257-1

text: Broad Institute

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Generic

text: Enterococcus faecalis 7330257-1

text: Enterococcus faecalis EnGen0060

text: Genomic DNA

text: Other

text: Enterococcus faecalis 7330257-1 Genomic DNA sample Enterococcus faecalis 7330257-1


PRJNA172113.Enterococcus faecium HM1074

text: Broad Institute

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Generic

text: Enterococcus faecium EnGen0153

text: Enterococcus faecium HM1074

text: Generic sample from Enterococcus faecium HM1074


text: Broad Institute

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: human gut metagenome

characteristic: sample name

text: Generic sample from unclassified Bacteria (miscellaneous)


name: 608166.10772.Genomic DNA.Enterococcus faecalis 7330112-3

text: Broad Institute

text: live

text: Generic

characteristic: SRA accession

text: Generic

text: Enterococcus faecalis 7330112-3

characteristic: collaborator sample id

text: Enterococcus faecalis EnGen0080

text: Genomic DNA

text: Other

text: Enterococcus faecalis 7330112-3 Genomic DNA sample Enterococcus faecalis 7330112-3


name: 608166.10772.Genomic DNA.Enterococcus faecalis 2630V05

text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecalis 2630V05

text: Enterococcus faecalis EnGen0058

text: Genomic DNA

characteristic: sample type

text: Other

characteristic: sex

text: Enterococcus faecalis 2630V05 Genomic DNA sample Enterococcus faecalis 2630V05


text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecium EnGen0142

characteristic: organism

text: Enterococcus faecium 9830565-4

characteristic: strain

text: Generic sample from Enterococcus faecium 9830565-4


PRJNA172113.Enterococcus faecalis B2670

characteristic: External Id

text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecalis EnGen0203

text: Enterococcus faecalis B2670

text: Generic sample from Enterococcus faecalis B2670


text: Broad Institute

characteristic: INSDC center name

text: live

text: Generic

text: Generic

text: Enterococcus faecium EnGen0140

text: Enterococcus faecium 9830512-2

text: Generic sample from Enterococcus faecium 9830512-2


name: 608166.10772.Genomic DNA.Enterococcus faecalis 7330445-1

text: Broad Institute

characteristic: INSDC first public

text: live

text: Generic

text: Generic

text: Enterococcus faecalis EnGen0077

text: Enterococcus faecalis 7330445-1

characteristic: sample id

text: Genomic DNA

text: Other

text: Enterococcus faecalis 7330445-1 Genomic DNA sample Enterococcus faecalis 7330445-1


PRJNA172113.Enterococcus faecium UAA720

text: Broad Institute

characteristic: INSDC last update

text: live

text: Generic

text: Generic

text: Enterococcus faecium EnGen0163

text: Enterococcus faecium UAA720

text: Generic sample from Enterococcus faecium UAA720

characteristic: title


name: 608166.10772.Genomic DNA.Enterococcus faecium 9830386-2

text: Broad Institute

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Generic

text: Enterococcus faecium 9830386-2

text: Enterococcus faecium EnGen0139

text: Genomic DNA

text: Other

text: Enterococcus faecium 9830386-2 Genomic DNA sample Enterococcus faecium 9830386-2


text: Broad Institute

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Generic

text: Enterococcus faecalis EnGen0071

text: Enterococcus faecalis 7430416-3

text: Generic sample from Enterococcus faecalis 7430416-3


name: 608166.10772.Genomic DNA.Enterococcus faecalis B1385

text: Broad Institute

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: Enterococcus faecalis B1385

text: Enterococcus faecalis EnGen0070

text: Genomic DNA

text: Other

text: Enterococcus faecalis B1385 Genomic DNA sample Enterococcus faecalis B1385


name: 608166.10772.Genomic DNA.Enterococcus faecalis C19315WT

text: Broad Institute

text: live

text: Generic

characteristic: SRA accession

text: Generic

text: Enterococcus faecalis C19315WT

text: Enterococcus faecalis EnGen0063

text: Genomic DNA

text: Other

text: Enterococcus faecalis C19315WT Genomic DNA sample Enterococcus faecalis C19315WT


name: 608166.10772.Genomic DNA.Enterococcus faecalis C19315SCV

text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecalis C19315SCV

characteristic: collaborator sample id

text: Enterococcus faecalis EnGen0059

text: Genomic DNA

text: Other

text: Enterococcus faecalis C19315SCV Genomic DNA sample Enterococcus faecalis C19315SCV


name: 608166.10772.Genomic DNA.Enterococcus faecalis 7430315-3

text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecalis 7430315-3

text: Enterococcus faecalis EnGen0084

text: Genomic DNA

characteristic: sample type

text: Other

text: Enterococcus faecalis 7430315-3 Genomic DNA sample Enterococcus faecalis 7430315-3


name: PRJNA172113.Enterococcus faecium A17 Sv1

text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecium EnGen0147

text: Enterococcus faecium A17 Sv1

characteristic: sample name

text: A17 Sv1

text: Generic sample from Enterococcus faecium A17 Sv1


text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecium EnGen0137

characteristic: organism

text: Enterococcus faecium 9731352-4

text: Generic sample from Enterococcus faecium 9731352-4


PRJNA172113.Enterococcus faecalis B2813

text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecalis EnGen0228

text: Enterococcus faecalis B2813

characteristic: strain

text: Generic sample from Enterococcus faecalis B2813


name: 608166.10772.Genomic DNA.Enterococcus faecalis B1327

characteristic: External Id

text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecalis B1327

text: Enterococcus faecalis EnGen0068

text: Genomic DNA

text: Other

characteristic: sex

text: Enterococcus faecalis B1327 Genomic DNA sample Enterococcus faecalis B1327


text: Broad Institute

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Generic

text: human gut metagenome

text: Generic sample from unclassified Bacteria (miscellaneous)


text: Broad Institute

characteristic: INSDC last update

text: live

text: Generic

text: Generic

text: Enterococcus faecium EnGen0146

text: Enterococcus faecium 9931110-4

text: Generic sample from Enterococcus faecium 9931110-4


text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecalis EnGen0079

text: Enterococcus faecalis 7330245-2

text: Generic sample from Enterococcus faecalis 7330245-2

characteristic: title


name: 608166.10772.Genomic DNA.Enterococcus faecium UAA712

text: Broad Institute

characteristic: INSDC secondary accession

text: live

text: Generic

text: Generic

text: Enterococcus faecium UAA712

text: Enterococcus sp. EnGen0157

text: Genomic DNA

text: Other

text: Enterococcus faecium UAA712 Genomic DNA sample Enterococcus faecium UAA712


name: 608166.10772.Genomic DNA.Enterococcus faecalis 19116

text: Broad Institute

text: live

characteristic: INSDC status

text: Generic

text: Generic

text: Enterococcus faecalis 19116

text: Enterococcus faecalis EnGen0075

text: Genomic DNA

text: Other

text: Enterococcus faecalis 19116 Genomic DNA sample Enterococcus faecalis 19116


PRJNA172113.Enterococcus faecalis B2685

text: Broad Institute

text: live

text: Generic

characteristic: NCBI submission model

text: Generic

text: Enterococcus faecalis EnGen0204

text: Enterococcus faecalis B2685

text: Generic sample from Enterococcus faecalis B2685


PRJNA172113.Enterococcus faecium UAA723

text: Broad Institute

text: live

text: Generic

characteristic: NCBI submission package

text: Generic

text: Enterococcus faecium EnGen0166

text: Enterococcus faecium UAA723

text: Generic sample from Enterococcus faecium UAA723


PRJNA173489.Staphylococcus aureus M0221

text: Broad Institute

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: Staphylococcus aureus M0221

text: Staphylococcus aureus M0221

text: Generic sample from Staphylococcus aureus M0221


text: Broad Institute

text: live

text: Generic

characteristic: SRA accession

text: Generic

text: Staphylococcus aureus B40950

text: Staphylococcus aurues B40950

text: Generic sample from Staphylococcus aureus B40950


PRJNA173489.Staphylococcus aureus M0364

text: Broad Institute

text: live

text: Generic

text: Generic

text: Staphylococcus aureus M0364

text: Staphylococcus aureus M0364

text: Generic sample from Staphylococcus aureus M0364


PRJNA173489.Staphylococcus aureus M0329

text: Broad Institute

text: live

text: Generic

text: Generic

text: Staphylococcus aureus M0329

text: Staphylococcus aureus M0329

text: Generic sample from Staphylococcus aureus M0329


text: Broad Institute

text: live

text: Generic

text: Generic

text: Staphylococcus aureus HI049B

text: Staphylococcus aureus HI049B

text: Generic sample from Staphylococcus aureus HI049B


PRJNA173489.Staphylococcus aureus M0328

text: Broad Institute

text: live

text: Generic

text: Generic

text: Staphylococcus aureus M0328

text: Staphylococcus aureus M0328

text: Generic sample from Staphylococcus aureus M0328


PRJNA173489.Staphylococcus aureus M0450

text: Broad Institute

text: live

text: Generic

text: Generic

text: Staphylococcus aureus M0450

text: Staphylococcus aureus M0450

text: Generic sample from Staphylococcus aureus M0450


PRJNA173489.Staphylococcus aureus M0326

text: Broad Institute

text: live

text: Generic

text: Generic

text: Staphylococcus aureus M0326

text: Staphylococcus aureus M0326

text: Generic sample from Staphylococcus aureus M0326


PRJNA173489.Staphylococcus aureus M0103

text: Broad Institute

text: live

text: Generic

text: Generic

text: Staphylococcus aureus M0103

text: Staphylococcus aureus M0103

text: Generic sample from Staphylococcus aureus M0103


text: Broad Institute

text: live

text: Generic

text: Generic

text: Staphylococcus aureus HI010B

text: Staphylococcus aureus HI010B

text: Generic sample from Staphylococcus aureus HI010B


text: Broad Institute

text: live

text: Generic

text: Generic

text: human gut metagenome

text: Generic sample from unclassified Bacteria (miscellaneous)


PRJNA173489.Staphylococcus aureus M0045

text: Broad Institute

text: live

text: Generic

text: Generic

text: Staphylococcus aureus M0045

text: Staphylococcus aureus M0045

text: Generic sample from Staphylococcus aureus M0045


PRJNA173489.Staphylococcus aureus M0252

text: Broad Institute

text: live

text: Generic

text: Generic

text: Staphylococcus aureus M0252

text: Staphylococcus aureus M0252

text: Generic sample from Staphylococcus aureus M0252


PRJNA173489.Staphylococcus aureus M0066

text: Broad Institute

text: live

text: Generic

text: Generic

text: Staphylococcus aureus M0066

text: Staphylococcus aureus M0066

text: Generic sample from Staphylococcus aureus M0066


text: Broad Institute

text: live

text: Generic

text: Generic

text: Staphylococcus aureus HI049C

text: Staphylococcus aureus HI049C

text: Generic sample from Staphylococcus aureus HI049C


text: Broad Institute

text: live

text: Generic

text: Generic

text: Staphylococcus aureus B147830

text: Staphylococcus aurues B147830

text: Generic sample from Staphylococcus aureus B147830


PRJNA173489.Staphylococcus aureus M0192

text: Broad Institute

text: live

text: Generic

text: Generic

text: Staphylococcus aureus M0192

text: Staphylococcus aureus M0192

text: Generic sample from Staphylococcus aureus M0192


PRJNA173489.Staphylococcus aureus M0001

text: Broad Institute

text: live

text: Generic

text: Generic

text: Staphylococcus aureus M0001

text: Staphylococcus aureus M0001

text: Generic sample from Staphylococcus aureus M0001


PRJNA173489.Staphylococcus aureus M0340

text: Broad Institute

text: live

text: Generic

text: Generic

text: Staphylococcus aureus M0340

text: Staphylococcus aureus M0340

text: Generic sample from Staphylococcus aureus M0340


PRJNA173489.Staphylococcus aureus M0467

text: Broad Institute

text: live

text: Generic

text: Generic

text: Staphylococcus aureus M0467

text: Staphylococcus aureus M0467

text: Generic sample from Staphylococcus aureus M0467


PRJNA173489.Staphylococcus aureus M0494

text: Broad Institute

text: live

text: Generic

text: Generic

text: Staphylococcus aureus M0494

text: Staphylococcus aureus M0494

text: Generic sample from Staphylococcus aureus M0494


PRJNA173489.Staphylococcus aureus M0173

text: Broad Institute

text: live

text: Generic

text: Generic

text: Staphylococcus aureus M0173

text: Staphylococcus aureus M0173

text: Generic sample from Staphylococcus aureus M0173


text: Broad Institute

text: live

text: Generic

text: Generic

text: Staphylococcus aureus HIF003_B2N-C

text: Staphylococcus aureus HIF003_B2N-C

text: Generic sample from Staphylococcus aureus HIF003_B2N-C


PRJNA173489.Staphylococcus aureus M0468

text: Broad Institute

text: live

text: Generic

text: Generic

text: Staphylococcus aureus M0468

text: Staphylococcus aureus M0468

text: Generic sample from Staphylococcus aureus M0468


PRJNA173489.Staphylococcus aureus M0347

text: Broad Institute

text: live

text: Generic

text: Generic

text: Staphylococcus aureus M0347

text: Staphylococcus aureus M0347

text: Generic sample from Staphylococcus aureus M0347


PRJNA173489.Staphylococcus aureus M0029

text: Broad Institute

text: live

text: Generic

text: Generic

text: Staphylococcus aureus M0029

text: Staphylococcus aureus M0029

text: Generic sample from Staphylococcus aureus M0029


PRJNA173489.Staphylococcus aureus M0239

text: Broad Institute

text: live

text: Generic

text: Generic

text: Staphylococcus aureus M0239

text: Staphylococcus aureus M0239

text: Generic sample from Staphylococcus aureus M0239


PRJNA173489.Staphylococcus aureus HI022

text: Broad Institute

text: live

text: Generic

text: Generic

text: Staphylococcus aureus HI022

text: Staphylococcus aureus HI022

text: Generic sample from Staphylococcus aureus HI022


PRJNA173489.Staphylococcus aureus M0060

text: Broad Institute

text: live

text: Generic

text: Generic

text: Staphylococcus aureus M0060

text: Staphylococcus aureus M0060

text: Generic sample from Staphylococcus aureus M0060


PRJNA173489.Staphylococcus aureus M0478

text: Broad Institute

text: live

text: Generic

text: Generic

text: Staphylococcus aureus M0478

text: Staphylococcus aureus M0478

text: Generic sample from Staphylococcus aureus M0478


text: Broad Institute

text: live

text: Generic

text: Generic

text: human gut metagenome

text: Generic sample from unclassified Bacteria (miscellaneous)


PRJNA173489.Staphylococcus aureus M0408

text: Broad Institute

text: live

text: Generic

text: Generic

text: Staphylococcus aureus M0408

text: Staphylococcus aureus M0408

text: Generic sample from Staphylococcus aureus M0408


PRJNA173489.Staphylococcus aureus HI049

text: Broad Institute

text: live

text: Generic

text: Generic

text: Staphylococcus aureus HI049

text: Staphylococcus aureus HI049

text: Generic sample from Staphylococcus aureus HI049


text: Broad Institute

text: live

text: Generic

text: Generic

text: Carltonville [South Africa]

text: vero cells, Vero

characteristic: isolation source

text: Human herpesvirus 2 strain SD90

text: Generic sample from Human herpesvirus 2 strain SD90


text: USDA-ARS

text: live

text: Generic

text: Aegilops tauschii is the diploid source of the wheat D genome. Genome sequencing of Ae. tauschii accession AL8/78 was generated using the Roche 454 sequencing platform.

characteristic: description

text: Aegilops tauschii

text: Aegilops tauschii (D genome) AL8/78 Roche 454 data


Morex RNA-Seq

text: University of California, Riverside

text: live

text: Generic

text: Hordeum vulgare subsp. vulgare

text: Diverse Transcriptome of Morex Barley


text: USC

text: live

text: Generic

text: Homo sapiens

text: Musashi1 affects gliomagenesis via a gene network with branches in numerous biological processes and brain tumor pathways


Rhesus 8408

text: University of Nebraska - Non Human Primate Genomics Center

text: live

text: Generic

text: Macaca mulatta

text: Rhesus macaque (animal number 8408)


Dandi_Shoot salinity stress

text: Anand Agricultural University

text: live

text: Generic

text: Oryza sativa Indica Group

text: Dandi shoot (salinity stress)


Dandi_Root salinity stress

text: Anand Agricultural University

text: live

text: Generic

text: Oryza sativa Indica Group

text: Dandi root (salinity stress)


GR-11_Root salinity stress

text: Anand Agricultural University

text: live

text: Generic

text: Oryza sativa Indica Group

text: GR-11 root (salinity stress)


GR-11_Shoot salinity stress

text: Anand Agricultural University

text: live

text: Generic

text: Oryza sativa Indica Group

text: GR-11 shoot (salinity stress)


text: DOE Joint Genome Institute

text: live

text: Generic

text: Monascus purpureus NRRL 1596

text: Monascus purpureus NRRL 1596

characteristic: sample number

text: NRRL 1596

text: Generic sample from Monascus purpureus NRRL 1596


text: LGP, NIDDK, NIH

text: live

text: Generic

text: Day 6 of pregnancy

characteristic: developmental stage

characteristic: genotype

text: Mus musculus

characteristic: organism

characteristic: sample tag

text: Mammary gland

text: Mammary gland

characteristic: tissue

text: Stat5-null rep1 in P6


characteristic: External Id

text: LGP, NIDDK, NIH

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Day 6 of pregnancy

text: Mus musculus

text: Mammary gland

characteristic: strain

text: Mammary gland

text: Stat5-null rep2 in P6


text: LGP, NIDDK, NIH

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Day 6 of pregnancy

text: Mus musculus

text: Mammary gland

text: Mammary gland

text: Stat5-null rep3 in P6

characteristic: title


text: LGP, NIDDK, NIH

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Day 6 of pregnancy

text: Stat5b (Stat5abnull/Stat5a-)

text: Mus musculus

text: Mammary gland

text: Mammary gland

text: Stat5b single allele rep1 in P6


text: LGP, NIDDK, NIH

text: live

text: Generic

text: Day 6 of pregnancy

text: Stat5b (Stat5abnull/Stat5a-)

text: Mus musculus

text: Mammary gland

text: Mammary gland

text: Stat5b single allele rep2 in P6


text: LGP, NIDDK, NIH

text: live

text: Generic

text: Day 6 of pregnancy

text: Stat5b (Stat5abnull/Stat5a-)

text: Mus musculus

text: Mammary gland

text: Mammary gland

text: Stat5b single allele rep3 in P6


text: LGP, NIDDK, NIH

text: live

text: Generic

text: Day 6 of pregnancy

text: Stat5a (Stat5abnull/Stat5b-)

text: Mus musculus

text: Mammary gland

text: Mammary gland

text: Stat5a single allele rep1 in P6


text: LGP, NIDDK, NIH

text: live

text: Generic

text: Day 6 of pregnancy

text: Stat5a (Stat5abnull/Stat5b-)

text: Mus musculus

text: Mammary gland

text: Mammary gland

text: Stat5a single allele rep2 in P6


text: LGP, NIDDK, NIH

text: live

text: Generic

text: Day 6 of pregnancy

text: Stat5a (Stat5abnull/Stat5b-)

text: Mus musculus

text: Mammary gland

text: Mammary gland

text: Stat5a single allele rep3 in P6


text: LGP, NIDDK, NIH

text: live

text: Generic

text: Day 6 of pregnancy

text: Mus musculus

text: Mammary gland

text: Mammary gland

text: Stat5bb double alleles rep1 in P6


text: LGP, NIDDK, NIH

text: live

text: Generic

text: Day 6 of pregnancy

text: Mus musculus

text: Mammary gland

text: Mammary gland

text: Stat5bb double alleles rep2 in P6


text: LGP, NIDDK, NIH

text: live

text: Generic

text: Day 6 of pregnancy

text: Mus musculus

text: Mammary gland

text: Mammary gland

text: Stat5bb double alleles rep3 in P6


text: LGP, NIDDK, NIH

text: live

text: Generic

text: Day 6 of pregnancy

text: Mus musculus

text: Mammary gland

text: Mammary gland

text: Stat5a/b single allele rep1 in P6


text: LGP, NIDDK, NIH

text: live

text: Generic

text: Day 6 of pregnancy

text: Mus musculus

text: Mammary gland

text: Mammary gland

text: Stat5a/b single allele rep2 in P6


text: LGP, NIDDK, NIH

text: live

text: Generic

text: Day 6 of pregnancy

text: Mus musculus

text: Mammary gland

text: Mammary gland

text: Stat5a/b single allele rep3 in P6


text: LGP, NIDDK, NIH

text: live

text: Generic

text: Day 6 of pregnancy

text: Wild-type

text: Mus musculus

text: Mammary gland

text: Mammary gland

text: Stat5aabb wild-type rep1 in P6


text: LGP, NIDDK, NIH

text: live

text: Generic

text: Day 6 of pregnancy

text: Wild-type

text: Mus musculus

text: Mammary gland

text: Mammary gland

text: Stat5aabb wild-type rep2 in P6


text: LGP, NIDDK, NIH

text: live

text: Generic

text: Day 6 of pregnancy

text: Wild-type

text: Mus musculus

text: Mammary gland

text: Mammary gland

text: Stat5aabb wild-type rep3 in P6


text: LGP, NIDDK, NIH

text: live

text: Generic

text: Day of parturition within less than 12 hours after delivery

text: Mus musculus

text: Mammary gland

text: Mammary gland

text: Stat5-null rep1 in L1


text: LGP, NIDDK, NIH

text: live

text: Generic

text: Mus musculus

text: Mammary gland

text: Mammary gland

text: Stat5-null rep2 in L1


text: LGP, NIDDK, NIH

text: live

text: Generic

text: Stat5b (Stat5abnull/Stat5a-)

text: Mus musculus

text: Mammary gland

text: Mammary gland

text: Stat5b single allele rep1 in L1


text: LGP, NIDDK, NIH

text: live

text: Generic

text: Stat5b (Stat5abnull/Stat5a-)

text: Mus musculus

text: Mammary gland

text: Mammary gland

text: Stat5b single allele rep2 in L1


text: LGP, NIDDK, NIH

text: live

text: Generic

text: Stat5b (Stat5abnull/Stat5a-)

text: Mus musculus

text: Mammary gland

text: Mammary gland

text: Stat5b single allele rep3 in L1


text: LGP, NIDDK, NIH

text: live

text: Generic

text: Stat5a (Stat5abnull/Stat5b-)

text: Mus musculus

text: Mammary gland

text: Mammary gland

text: Stat5a single allele rep1 in L1


text: LGP, NIDDK, NIH

text: live

text: Generic

text: Stat5a (Stat5abnull/Stat5b-)

text: Mus musculus

text: Mammary gland

text: Mammary gland

text: Stat5a single allele rep2 in L1


text: LGP, NIDDK, NIH

text: live

text: Generic

text: Mus musculus

text: BB

text: Mammary gland

text: Mammary gland

text: Stat5bb double alleles rep1 in L1


text: LGP, NIDDK, NIH

text: live

text: Generic

text: Mus musculus

text: Mammary gland

text: Mammary gland

text: Stat5bb double alleles rep2 in L1


text: LGP, NIDDK, NIH

text: live

text: Generic

text: Mus musculus

text: AB

text: Mammary gland

text: Mammary gland

text: Stat5a/b single allele rep1 in L1


text: LGP, NIDDK, NIH

text: live

text: Generic

text: Mus musculus

text: Mammary gland

text: Mammary gland

text: Stat5a/b single allele rep2 in L1


text: LGP, NIDDK, NIH

text: live

text: Generic

text: Wild-type

text: Mus musculus

text: WT

text: Mammary gland

text: Mammary gland

text: Stat5aabb wild-type rep1 in L1


text: LGP, NIDDK, NIH

text: live

text: Generic

text: Wild-type

text: Mus musculus

text: Mammary gland

text: Mammary gland

text: Stat5aabb wild-type rep2 in L1


text: DOE Joint Genome Institute

text: live

text: Generic

text: Aspergillus versicolor

characteristic: description

text: Aspergillus versicolor

characteristic: sample number

text: Generic sample from Aspergillus versicolor


text: Ronald Evans, Gene Expression Lab, Salk Institute

text: live

text: Generic

text: primary bone marrow-derived macrophages

characteristic: cell type

characteristic: chip antibody

text: Mus musculus

text: primary bone marrow-derived macrophages

text: IRF3-ChIP + LPS

text: LPS-stimulated macrophages

characteristic: treatment


text: live

text: Generic

text: primary bone marrow-derived macrophages

text: Mus musculus

characteristic: organism

text: primary bone marrow-derived macrophages

text: IRF3-ChIP + 1uM Dex + LPS

text: Dexamethasone treated, LPS-stimulated macrophages


Rafflesia cantleyi transcriptome

characteristic: External Id

text: Harvard University Herbaria

text: live

text: Generic

text: Rafflesia cantleyi from peninsular Malaysia

text: Rafflesia cantleyi

text: Rafflesia cantleyi transcriptome sample


text: Corpogen

characteristic: INSDC center name

text: live

text: Generic

text: Hot spring A1 had a low pH and high chloride and sulfate contents, the latter resulting from the dissolution of volcanic gases (i.e. CO2, SO2, H2S, HCl) in shallow waters, making this a typical volcanic-magmatic hot spring

text: Bacteria


text: Corpogen

characteristic: INSDC first public

text: live

text: Generic

text: Hot spring A4 has an acidic pH (2.7-3.1), low chloride and high sulfate concentrations. It is a steam-heated acidic sulfate water that result from the vapor phase separation due to boiling geothermal fluid and the oxidation of H2S

text: Bacteria

text: El Calvario


text: Corpogen

text: live

text: Generic

text: Bacteria

text: El Guali


text: Corpogen

text: live

text: Generic

text: Hot spring P3 has high temperature of 68*C, pH, sulfate and concentrations of TDS, which can act as pH buffer. The sulfate in this neutral sodium sulfate spring is probably due to the presence of an evaporated salt deposit located near the area.

text: Bacteria

text: Ojo del Diablo


name: Oil field pipeline corrosion in addition to seawater injection line

text: University of Oklahoma Norman Campus, Advanced Center for Genome Technology

text: live

text: Generic

text: Samples were scraped from the inner surface of oil field pipelines. Two samples, designated A and B, originated from water reinjection lines. They contained substantial quantities of crude oil, corrosion products such as iron sulfides, and extrapolymeric substances (EPS) from biofilm. As for the second experiment samples were scraped from the inner surface of seawater injection line. The sample designated C. It did not contain crude oil but did contain lesser quantities of corrosion products and EPS.

text: environmental samples

text: Expanding the use of streamlined DNA extraction techniques to novel environmental microbiology samples


Col-0 Untreated Adult Plants

text: The Salk Institute for Biological Studies

text: live

text: Generic

text: Untreated adult (~5 week old) Col-0 Arabidopsis thaliana plants grown under short day conditions.

text: Arabidopsis thaliana

text: Col-0 Untreated Adult Plants


name: Caenorhabditis elegans N2 larval L1 all cells - DSN treated library FGSR401

text: University of Washington Genome Sciences

text: live

text: Generic

text: C. elegans N2 larval L1 all cells from David Miller's lab, library FGSR401, total RNA extracted from synchronized (starved overnight in M9) L1 stage larvae. DSN treated. This library was sequenced at the University of Washington. This sample is available through the modENCODE DCC (www.modencode.org) as: DMM401_N2all_L1-DSN Local library name: DMM401_N2all_L1-DSN This sample is a biological replicate for DCC project: DMM387-NSML_NSMR-nrn_L1-V Quality values are ASCII encoded Phred + 33 through GAPipeline1.12.

text: Caenorhabditis elegans


Tetrastigma rafflesiae transcriptome

text: Harvard University Herbaria

text: live

text: Generic

text: Leaf, tendril, and stem tissue was obtained from an unparasitized specimen of Tetrastigma rafflesiae at the Missouri Botanical Garden (St. Louis, Missouri, USA)

text: Tetrastigma leucostaphylum

text: Tetrastigma rafflesiae transcriptome sample


Rafflesia cantleyi genomic DNA

text: Harvard University Herbaria

text: live

text: Generic

text: Rafflesia cantleyi

text: Rafflesia cantleyi genomic DNA sample


name: Caenorhabditis elegans N2 larval L1 all cells - DSN treated library FGSR402

text: live

text: Generic

text: C. elegans N2 larval L1 all cells, library FGSR402 from David Miller's lab, total RNA extracted from synchronized (starved overnight in M9) L1 stage larvae, DSN treated. This sample is available through the modENCODE DCC (www.modencode.org) as: DMM402_N2all_L1-DSN Local library name: DMM402_N2all_L1-DSN This sample was also sequenced as total RNA, without DSN treatment, available from the DCC as: DMM402-N2all_L1-V Quality values are ASCII encoded Phred + 33 through GAPipeline1.12.

text: Caenorhabditis elegans


name: Caenorhabditis elegans NC2484 larval L2 A motor neuron - DSN treated library FGSR408

text: live

text: Generic

text: C. elegans DSN treated library FGSR408, NC2484 [wdIs5 (unc-4::GFP) III]. Total RNA extracted from A-class neurons (I5, AVF, SAB, DA, VA) isolated by FACS from synchronized L2 larvae (starved overnight in M9, grown on OP50-1 plates for 26 hour at 23 C until mid-L2 stage postdeirid sensory organelle detected). This sample is available through the modENCODE DCC (www.modencode.org) as: DMM408_Amot_nrn_L2-DSN Local library name: DMM408_Amot_nrn_L2-DSN Quality values are ASCII encoded Phred + 33 through GAPipeline1.12.

text: Caenorhabditis elegans


name: Caenorhabditis elegans NC2484 larval L2 A motor neuron - DSN treated library FGSR414

text: live

text: Generic

text: C. elegans DSN treated library FGSR414, NC2484 [wdIs5 (unc-4::GFP) III]. Total RNA extracted from A-class neurons (I5, AVF, SAB, DA, VA) isolated by FACS from synchronized L2 larvae (starved overnight in M9, grown on OP50-1 plates for 26 hour at 23 C until mid-L2 stage postdeirid sensory organelle detected. This sample is available through the modENCODE DCC (www.modencode.org) as: DMM414_Amot_nrn_L2-DSN Local library name: DMM414_Amot_nrn_L2-DSN Quality values are ASCII encoded Phred + 33 through GAPipeline1.12.

text: Caenorhabditis elegans


name: Caenorhabditis elegans NC2484 larval L2 A motor neuron - DSN treated library FGSR415

text: live

text: Generic

text: C. elegans DSN treated library FGSR415, NC2484 [wdIs5 (unc-4::GFP) III]. Total RNA extracted from A-class neurons (I5, AVF, SAB, DA, VA) isolated by FACS from synchronized L2 larvae (starved overnight in M9, grown on OP50-1 plates for 26 hour at 23 C until mid-L2 stage postdeirid sensory organelle detected). This sample is available through the modENCODE DCC (www.modencode.org) as: DMM415_Amot_nrn_L2-DSN Local library name: DMM415_Amot_nrn_L2-DSN Quality values are ASCII encoded Phred + 33 through GAPipeline1.12.

text: Caenorhabditis elegans


text: University of California, Riverside

text: live

text: Generic

text: Vigna unguiculata subsp. unguiculata

text: MTP BACs of Cowpea Genotype IT7K-499-35


text: Zhejiang Academy of Agricultural Sciences

text: live

text: Generic

text: Merged thrips transcriptom sequences

text: Frankliniella occidentalis

text: Thrips with TSWV infected and non-infected samples merged


TSWV

text: live

text: Generic

text: RNA-Seq(quantative) thrips with TSWV infected

text: Frankliniella occidentalis

text: Thrips with TSWV infected RNA-Seq(quantative)


non-infected

text: live

text: Generic

text: RNA-Seq (quantative) of thrips TSWV non-infected

text: Frankliniella occidentalis


text: University of Lausanne and University Hospital Center

text: live

text: Generic

text: RCA1 mutant

characteristic: genotype/variation

text: Candida albicans

text: mid exponential growth-phase culture in YEPD

text: RCA1 mutant, replicate 1


characteristic: INSDC last update

text: live

text: Generic

text: RCA1 mutant

text: Candida albicans

text: RCA1 mutant, replicate 2


characteristic: INSDC secondary accession

text: live

text: Generic

text: RCA1 revertant

text: Candida albicans

text: RCA1 revertant replicate 1


text: live

characteristic: INSDC status

text: Generic

text: RCA1 revertant

text: Candida albicans

text: RCA1 revertant replicate 2


text: Level 4, Institute of Metabolic Science, University of Cambridge Metabolic Research Laboratories

text: live

text: Generic

text: Invitrogen

characteristic: beads vendor

characteristic: cell line

text: Dynabeads M-280 Streptavidin

characteristic: clip beads

text: Mus musculus

text: NIH3T3_N-Term-CIRBP CLIP-seq

text: N-Term-CIRBP CLIP RNA

characteristic: title


text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Invitrogen

text: Dynabeads M-280 Streptavidin

text: Mus musculus

text: NIH3T3_C-Term-CIRBP CLIP-seq

text: C-Term-CIRBP CLIP RNA


text: live

text: Generic

text: Mus musculus

text: NIH3T3_siCtrl RNA-seq

text: SiCtrl Total RNA

text: Control siRNA

characteristic: treated with


text: live

text: Generic

text: Mus musculus

text: NIH3T3_siCIRP RNA-seq

text: SiCirbp Total RNA

text: CIRP siRNA


text: Guoping Fan, Human Genetics, UCLA

text: live

text: Generic

text: ESC

characteristic: cell type

text: Homo sapiens

text: ESC

text: ESC BG01 rep1


text: Guoping Fan, Human Genetics, UCLA

text: live

text: Generic

text: ESC

text: Homo sapiens

characteristic: organism

text: ESC

text: ESC BG01 rep2


characteristic: External Id

text: Guoping Fan, Human Genetics, UCLA

text: live

text: Generic

text: partially differentiated ESC

text: Homo sapiens

characteristic: parental cell line

text: partially differentiated ESC

text: partially differentiated ESC BG01 partial diff


text: Guoping Fan, Human Genetics, UCLA

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: primary fetal RPE

text: Homo sapiens

text: fetal RPE

text: fetal RPE


text: Guoping Fan, Human Genetics, UCLA

characteristic: INSDC last update

text: live

text: Generic

text: ESC

text: Homo sapiens

text: ESC

text: ESC H9 ESC


text: Guoping Fan, Human Genetics, UCLA

characteristic: INSDC secondary accession

text: live

text: Generic

text: pigmented cluster

text: Homo sapiens

text: pigmented cluster

text: pigmented cluster H9


text: Guoping Fan, Human Genetics, UCLA

text: live

characteristic: INSDC status

text: Generic

text: partial differentiated ESC

text: Homo sapiens

text: partial differentiated ESC

text: partial differentiated ESC H9


text: Guoping Fan, Human Genetics, UCLA

text: live

text: Generic

text: ES-RPE

text: Homo sapiens

text: ES-RPE

text: ES-RPE H9


text: Guoping Fan, Human Genetics, UCLA

text: live

text: Generic

text: ES-RPE

text: Homo sapiens

text: ES-RPE

text: ES-RPE hiPS2


text: Guoping Fan, Human Genetics, UCLA

text: live

text: Generic

text: ES-RPE

text: Homo sapiens

text: ES-RPE

text: ES-RPE HSF1


name: control samples for catfish columnaris RNA-Seq

text: Auburn University

text: live

text: Generic

text: Ictalurus punctatus

text: control samples for differential expression analysis


name: 4h samples for catfish columnaris RNA-Seq

text: Auburn University

text: live

text: Generic

text: Ictalurus punctatus

text: 4h samples for differential expression analysis


S. cerevisiae msh2_2

text: Teagasc

text: live

text: Generic

text: Saccharomyces cerevisiae Y06240 (BY4741; Mat a; his3D1; leu2D0; met15D0; ura3D0; msh2::kanMX4) lineage 2

characteristic: description

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae msh2_2


name: 24h samples for catfish columnaris RNA-Seq

text: Auburn University

text: live

text: Generic

text: Ictalurus punctatus

text: 24h samples for differential expression analysis


name: 48h raw data for catfish columnaris RNA-seq project

text: Auburn University

text: live

text: Generic

text: Ictalurus punctatus

text: 48h samples for differential expression analysis


text: UCLA

text: live

text: Generic

text: wild type (eco. Columbia)

characteristic: genotype

text: Arabidopsis thaliana

text: floral tissue, wild type, small RNA

text: floral

characteristic: tissue

text: Col small RNA


text: UCLA

text: live

text: Generic

text: crt1-4 (eco. Columbia)

text: Arabidopsis thaliana

text: floral tissue, crt1-4, small RNA

text: floral

text: crt1-4 small RNA

characteristic: title


text: UCLA

text: live

text: Generic

characteristic: NCBI submission model

text: crh6-3 (eco. Columbia)

text: Arabidopsis thaliana

text: floral tissue, crh6-3, small RNA

text: floral

text: crh6-3 small RNA


text: UCLA

text: live

text: Generic

characteristic: NCBI submission package

text: wild type (eco. Columbia)

text: Arabidopsis thaliana

text: leaf tissue, wild type, mRNA

text: leaf

text: Col mRNA


text: UCLA

text: live

text: Generic

characteristic: SRA accession

text: crt1-4 (eco. Columbia)

text: Arabidopsis thaliana

text: leaf tissue, crt1-4, mRNA

text: leaf

text: crt1-4 mRNA


text: UCLA

text: live

text: Generic

text: crh6-3 (eco. Columbia)

text: Arabidopsis thaliana

text: leaf tissue, crh6-3, mRNA

text: leaf

text: crh6-3 mRNA


text: UCLA

text: live

text: Generic

text: SDC::GFP wild type (eco. Columbia)

text: Arabidopsis thaliana

text: leaf tissue, SDC::GFP wild type, mRNA

text: leaf

text: SDC::GFP mRNA EMS batch 1


text: UCLA

text: live

text: Generic

text: SDC::GFP cmt3-11 (eco. Columbia)

text: Arabidopsis thaliana

text: leaf tissue, SDC::GFP cmt3-11, mRNA

text: leaf

text: cmt3-11 mRNA EMS batch 1


text: UCLA

text: live

text: Generic

text: SDC::GFP cmt3-11 crt1-3 (eco. Columbia)

text: Arabidopsis thaliana

text: leaf tissue, SDC::GFP cmt3-11 crt1-3, mRNA

text: leaf

text: cmt3-11 crt1-3 mRNA EMS batch 1


text: UCLA

text: live

text: Generic

text: SDC::GFP crh6-1 (eco. Columbia)

text: Arabidopsis thaliana

text: leaf tissue, SDC::GFP crh6-1, mRNA

text: leaf

text: crh6-1 mRNA EMS batch 1


text: UCLA

text: live

text: Generic

text: SDC::GFP wild type (eco. Columbia)

text: Arabidopsis thaliana

text: leaf tissue, SDC::GFP wild type, mRNA

text: leaf

text: SDC::GFP mRNA EMS batch 2


text: UCLA

text: live

text: Generic

text: SDC::GFP cmt3-11 (eco. Columbia)

text: Arabidopsis thaliana

text: leaf tissue, SDC::GFP cmt3-11, mRNA

text: leaf

text: cmt3-11 mRNA EMS batch 2


text: UCLA

text: live

text: Generic

text: SDC::GFP cmt3-11 crt1-3 (eco. Columbia)

text: Arabidopsis thaliana

text: leaf

text: cmt3-11 crt1-3 mRNA EMS batch 2


text: UCLA

text: live

text: Generic

text: SDC::GFP crh6-1 (eco. Columbia)

text: Arabidopsis thaliana

text: leaf tissue, SDC::GFP crh6-1, mRNA

text: leaf

text: crh6-1 mRNA EMS batch 2


text: UCLA

text: live

text: Generic

text: SDC::GFP crt1-3 crh6-1 (eco. Columbia)

text: Arabidopsis thaliana

text: leaf tissue, SDC::GFP crt1-3 crh6-1, mRNA

text: leaf

text: crt1-3 crh6-1 mRNA EMS batch 2


text: UCLA

text: live

text: Generic

text: wild type (eco. Columbia)

text: Arabidopsis thaliana

text: leaf tissue, wild type, bisulfite-treated genomic DNA

text: leaf

text: Col bisulfite


text: UCLA

text: live

text: Generic

text: crt1-4 (eco. Columbia)

text: Arabidopsis thaliana

text: leaf tissue, crt1-4, bisulfite-treated genomic DNA

text: leaf

text: crt1-4 bisulfite


text: UCLA

text: live

text: Generic

text: crh6-3 (eco. Columbia)

text: Arabidopsis thaliana

text: leaf tissue, crh6-3, bisulfite-treated genomic DNA

text: leaf

text: crh6-3 bisulfite


text: UCLA

text: live

text: Generic

text: Abcam

characteristic: antibody vendor

characteristic: chip antibody

text: wild type (eco. Columbia)

text: Arabidopsis thaliana

text: leaf tissue, wild type, H3 ChIP

text: leaf

text: Col ChIP H3


text: UCLA

text: live

text: Generic

text: Abcam

text: wild type (eco. Columbia)

text: Arabidopsis thaliana

characteristic: organism

text: leaf tissue, wild type H3K9me2 ChIP

text: leaf

text: Col ChIP H3K9me2


characteristic: External Id

text: UCLA

text: live

text: Generic

text: Abcam

text: crt1-4 (eco. Columbia)

text: Arabidopsis thaliana

text: leaf tissue, crt1-4, H3 ChIP

text: leaf

text: crt1-4 ChIP H3


text: UCLA

text: live

text: Generic

text: Abcam

text: crt1-4 (eco. Columbia)

text: Arabidopsis thaliana

text: leaf tissue, crt1-4, H3K9me2 ChIP

text: leaf

text: crt1-4 ChIP H3K9me2


text: UCLA

text: live

text: Generic

text: Abcam

text: crh6-3 (eco. Columbia)

text: Arabidopsis thaliana

text: leaf tissue, crh6-3, H3 ChIP

text: leaf

text: crh6-3 ChIP H3


text: UCLA

text: live

text: Generic

text: Abcam

text: crh6-3 (eco. Columbia)

text: Arabidopsis thaliana

text: leaf tissue, crh6-3, H3K9me2 ChIP

text: leaf

text: crh6-3 ChIP H3K9me2


S. cerevisiae msh2_3

text: Teagasc

text: live

text: Generic

text: Saccharomyces cerevisiae Y06240 (BY4741; Mat a; his3D1; leu2D0; met15D0; ura3D0; msh2::kanMX4) lineage 3

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae msh2_3


name: Caenorhabditis elegans NW1229 larval L1 all neurons - total RNA - library FGSR383

text: University of Washington Genome Sciences

text: live

text: Generic

text: C. elegans library FGSR383, NW1229{evIs111[F25B3.3::GFP; dpy-20(+)] dpy-20(e1362)IV} (reagent provided by Joseph Culotti (Mt Sinai Hospital, Toronto) larval neurons; total RNA extracted from neurons isolated by FACS from synchronized (starved overnight in M9) L1 stage larvae. This library was sequenced at Vanderbilt University. This sample is available through the modENCODE DCC (www.modencode.org) as: DMM383-N2all-nrn_L1-V Local library name: DMM383-N2all-nrn_L1-V This sample is a biological replicate for DCC project: DMM391-N2all-nrn_L1-V Quality values are ASCII encoded Phred + 33 through GAPipeline1.12.

text: Caenorhabditis elegans


name: Caenorhabditis elegans N2 larval L1 all cells - total RNA - library FGSR401

text: live

text: Generic

text: C. elegans N2 larval L1 all cells, library FGSR401, total RNA extracted from synchronized (starved overnight in M9) L1 stage larvae. This library was sequenced at Vanderbilt University. This sample is available through the modENCODE DCC (www.modencode.org) as: DMM401-N2all_L1-V Local library name: DMM401-N2all_L1-V This sample was also sequenced after being DSN treated, available from the DCC as: DMM401_N2all_L1-DSN Quality values are ASCII encoded Phred + 33 through GAPipeline1.12.

text: Caenorhabditis elegans


name: Caenorhabditis elegans LX837 larval L1 NSML and NSMR neurons total RNA library FGSR387

text: live

text: Generic

text: C. elegans LX837[vsIs45 (tph-1::GFP)] (reagent provided by Daniel Colon-Ramos (Yale)) larval L1 NSML and NSMR neurons; total RNA extracted from NSM neurons isolated by FACS from synchronized (starved overnight in M9) L1 stage larvae. This library was sequenced at Vanderbilt University. This sample is available through the modENCODE DCC (www.modencode.org) as: DMM387-NSML_NSMR-nrn_L1-V Local library name: DMM387-NSML_NSMR-nrn_L1-V This sample is a biological replicate for DCC project: 534_DMM_386 Quality values are ASCII encoded Phred + 33 through GAPipeline1.12.

text: Caenorhabditis elegans


name: Caenorhabditis elegans NW1229 larval L1 all neurons - total RNA - library FGSR391

text: live

text: Generic

text: C. elegans library FGSR391, NW1229{evIs111[F25B3.3::GFP; dpy-20(+)] dpy-20(e1362)IV} (reagent provided by Joseph Culotti (Mt Sinai Hospital, Toronto) larval neurons; total RNA extracted from neurons isolated by FACS from synchronized (starved overnight in M9) L1 stage larvae. This library was sequenced at Vanderbilt University. This sample is available through the modENCODE DCC (www.modencode.org) as: DMM391-N2all-nrn_L1-V Local library name: DMM391-N2all-nrn_L1-V This sample is a biological replicate for DCC project: DMM383-N2all-nrn_L1-V Quality values are ASCII encoded Phred + 33 through GAPipeline1.12.

text: Caenorhabditis elegans


name: Caenorhabditis elegans N2 larval L1 all cells - total RNA - library FGSR402

text: live

text: Generic

text: C. elegans N2 larval L1 all cells, library FGSR402 from David Miller's lab, total RNA extracted from synchronized (starved overnight in M9) L1 stage larvae. This library was sequenced at Vanderbilt University. This sample is available through the modENCODE DCC (www.modencode.org) as: DMM402-N2all_L1-V Local library name: DMM402-N2all_L1-V This sample was also sequenced after being DSN treated, available from the DCC as: DMM402_N2all_L1-DSN Quality values are ASCII encoded Phred + 33 through GAPipeline1.12.

text: Caenorhabditis elegans


text: Baulcombe Group, Plant Sciences, University of Cambridge

text: live

text: Generic

text: Arabidopsis thaliana

text: root tissue

text: five weeks after grafting seven day-old seedlings

characteristic: tissue age

text: T transgene, homozygous

characteristic: transgene genotype


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Col-0, dcl3-5

text: Arabidopsis thaliana

text: shoot tissue

text: T and S transgenes, homozygous


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Arabidopsis thaliana

text: shoot tissue

text: T and S transgenes, homozygous


name: Caenorhabditis elegans N2 hand-picked 4 cell embryos - ribo-zero treated library 1

text: live

characteristic: INSDC status

text: Generic

text: Total RNA extracted from NSM neurons isolated by FACS from synchronized (starved overnight in M9) L1 stage larvae. Stage: L1 Cell: NSML + NSMR neurons Strain: LX837[vsIs45 (tph-1::GFP)] unpublished reagent provided by Daniel Colon-Ramos (Yale) This sample is available through the modENCODE DCC (www.modencode.org) as: 534_DMM_386 Local library name: DMM386-NSML_NSMR-nrn_L1 This sample is a biological replicate for DCC project: DMM387-NSML_NSMR-nrn_L1-V Quality values are ASCII encoded Phred + 33 through GAPipeline1.12.

characteristic: description

text: Caenorhabditis elegans


name: Caenorhabditis elegans sorted E cells – E2-E8 - library 1

text: live

text: Generic

text: Caenorhabditis elegans

text: Caenorhabditis elegans sorted E cells - E2-E8 - library 1


name: Caenorhabditis elegans N2 early embryos - DSN treated library N2_EE_DSN-51

text: live

text: Generic

text: Caenorhabditis elegans


name: Salmonella enterica subsp. enterica serovar Montevideo str. FSL_R8-2868

text: cow

characteristic: IFSAC+ Category

text: Food and Drug Administration, Center for Food Safety and Applied Nutrition

text: live

text: Pathogen.env

text: environmental/food/other

text: Generic

characteristic: biosamplemodel

text: Bos taurus

characteristic: isolation source

text: bos taurus:NCBITAXON_9913

characteristic: ontological term

text: Montevideo

characteristic: serovar

text: Animal

characteristic: source type

characteristic: strain

text: enterica

characteristic: sub species


characteristic: External Id

text: Broad Institute

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Generic

characteristic: collection date

text: 0025 [Switzerland]

text: Plasma:Plasma

text: Human immunodeficiency virus 1

characteristic: organism

characteristic: sample name

text: Human immunodeficiency virus 1

characteristic: specific host

text: Generic sample from Human immunodeficiency virus 1

characteristic: title


text: Broad Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Generic

text: 004 [United States]

text: Plasma:Plasma

text: Human immunodeficiency virus 1

text: Human immunodeficiency virus 1


text: Broad Institute

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: 004 [USA]

text: Plasma:Plasma

characteristic: isolation source

text: Human immunodeficiency virus 1

text: Human immunodeficiency virus 1


text: Broad Institute

text: live

text: Generic

text: Generic

text: 0024 [Switzerland]

text: Plasma:Plasma

text: Human immunodeficiency virus 1

text: Human immunodeficiency virus 1


text: Broad Institute

text: live

text: Generic

text: Generic

text: 004 [USA]

text: plasma

text: Human immunodeficiency virus 1

text: human

characteristic: strain


characteristic: External Id

text: Broad Institute

text: live

text: Generic

text: Generic

text: 004 [United States]

text: Plasma:Plasma

text: Human immunodeficiency virus 1

text: Homo sapiens


text: Broad Institute

text: live

text: Generic

characteristic: NCBI submission model

text: Generic

text: 0021 [Switzerland]

text: Plasma:Plasma

text: Human immunodeficiency virus 1

text: Human immunodeficiency virus 1


text: Broad Institute

text: live

text: Generic

characteristic: NCBI submission package

text: Generic

text: 025 [Germany]

text: Plasma:Plasma

text: Human immunodeficiency virus 1

text: Human immunodeficiency virus 1


text: Broad Institute

text: live

text: Generic

characteristic: SRA accession

text: Generic

text: 025 [Germany]

text: plasma

text: Human immunodeficiency virus 1

text: human


text: Broad Institute

text: live

text: Generic

text: Generic

characteristic: collection date

text: 025 [Germany]

text: Plasma:Plasma

text: Human immunodeficiency virus 1

text: Human immunodeficiency virus 1


text: Broad Institute

text: live

text: Generic

text: Generic

text: 4 [USA]

text: Plasma:Plasma

text: Human immunodeficiency virus 1

characteristic: organism

text: Human immunodeficiency virus 1


text: Broad Institute

text: live

text: Generic

text: Generic

text: 0023 [Switzerland]

text: Plasma:Plasma

text: Human immunodeficiency virus 1

characteristic: sample name

text: Human immunodeficiency virus 1


text: UCSF

text: live

text: Generic

text: Round 2 DSM1 selected P. falciparum clone of Dd2, Paired end reads from illumina sequencing

characteristic: description

text: Plasmodium falciparum Dd2

text: Plasmodium falciparum DSM1 resistant Dd2


text: Dartmouth Medical School

text: live

text: Generic

characteristic: cell line

text: Homo sapiens

text: Long-term estrogen deprived breast cancer cell line

characteristic: title

text: Untreated

characteristic: treatment


Round 1 C clone

text: UCSF

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Plasmodium falciparum Dd2

text: Round 1 C clone of DSM1 selection


text: UCSF

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Plasmodium falciparum Dd2

text: Round 2 DSM1 selected C Clone, C710-1b


text: UCSF

text: live

text: Generic

text: Plasmodium falciparum Dd2

text: Round 2 DSM1 selected C Clone, C710-2a


Col-0 air 3-day

text: The Salk Institute - Ecker Laboratory

text: live

text: Generic

text: Arabidopsis thaliana

text: Col-0 3-day-old etiolated seedlings in air


name: Col-0 Adult Plants Infected with Pst DC3000 at 3dpi

text: The Salk Institute for Biological Studies

text: live

text: Generic

text: Adult (~5 week old) Col-0 Arabidopsis thaliana plants grown under short day conditions infected with P. syringae DC3000. Tissue was collected 3 days post infection.

text: Arabidopsis thaliana


Col-0 ethylene 3-day

text: The Salk Institute - Ecker Laboratory

text: live

text: Generic

text: Arabidopsis thaliana

text: Col-0 3-day-old etiolated seedlings in ethylene


text: Wright State University

text: live

text: Generic

text: human gut metagenome

text: kHLT08 - healthy adolescent sample 08


text: Wright State University

text: live

text: Generic

text: human gut metagenome

text: kHLT11 - healthy adolescent sample 11


text: Wright State University

text: live

text: Generic

text: human gut metagenome

text: kIBS15 - IBS adolescent sample 15


text: Wright State University

text: live

text: Generic

text: human gut metagenome

text: kIBS17 - IBS adolescent sample 17


S. cerevisiae msh2_4

text: Teagasc

text: live

text: Generic

text: Saccharomyces cerevisiae Y06240 (BY4741; Mat a; his3D1; leu2D0; met15D0; ura3D0; msh2::kanMX4) lineage 4

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae msh2_4


S. cerevisiae msh2_5

text: Teagasc

text: live

text: Generic

text: Saccharomyces cerevisiae Y06240 (BY4741; Mat a; his3D1; leu2D0; met15D0; ura3D0; msh2::kanMX4) lineage 5

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae msh2_5


S. cerevisiae msh2_ancestor

text: Teagasc

text: live

text: Generic

text: Saccharomyces cerevisiae Y06240 (BY4741; Mat a; his3D1; leu2D0; met15D0; ura3D0; msh2::kanMX4) ancestor

text: Saccharomyces cerevisiae

text: Saccharomyces cerevisiae msh2_ancestor


text: Uppsala University

text: live

text: Generic

text: Ostrich samples from Sahlins struts, Borlange, Sweden. Preserved brain and liver tissues in RNAlater (Qiagen, Hilden, Germany). This sample contains pooled RNA from male brain tissue, individual: 22 and 26

text: Struthio camelus

text: Absence of dosage compensation and the arrested stage of sex chromosome evolution in ostriches: BM3


text: University of California, Irvine

text: live

text: Generic

text: Water sample from microcosm in deforested environment

text: Anopheles gambiae


text: University of California, Irvine

text: live

text: Generic

text: Water sample from microcosm in semi-forested environment

text: Anopheles gambiae


text: University of California, Irvine

text: live

text: Generic

text: Water sample from microcosm in forested environment

text: Anopheles gambiae


text: University of California, Irvine

text: live

text: Generic

text: Larval guts from deforested environment

text: Anopheles gambiae


text: University of California, Irvine

text: live

text: Generic

text: Larval guts from semi-forested environment

text: Anopheles gambiae


text: University of California, Irvine

text: live

text: Generic

text: Larval guts from forested environment

text: Anopheles gambiae


name: Salmonella enterica subsp. enterica serovar Montevideo str. FSL_R8-4673

text: clinical/research

characteristic: IFSAC+ Category

text: Food and Drug Administration, Center for Food Safety and Applied Nutrition

text: live

text: Pathogen.env

text: environmental/food/other

text: Generic

characteristic: biosamplemodel

characteristic: isolate

characteristic: ontological term

text: Montevideo

characteristic: serovar

characteristic: strain

text: enterica

characteristic: sub species


ctr1-1 air 3-day

characteristic: External Id

text: The Salk Institute - Ecker Laboratory

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Arabidopsis thaliana

characteristic: organism

text: ctr1-1 3-day-old etiolated seedlings in air


ein2 S645A air 3-day

text: The Salk Institute - Ecker Laboratory

characteristic: INSDC center name

text: live

text: Generic

text: Arabidopsis thaliana

text: ein2 S645A 3-day-old etiolated seedlings in air

characteristic: title


name: Salmonella enterica subsp. enterica serovar Montevideo str. FSL_R8-4843

text: clinical/research

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: Generic

text: Montevideo

text: enterica


name: Salmonella enterica subsp. enterica serovar Montevideo str. FSL_R8-4916

text: clinical/research

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: Generic

text: Montevideo

text: enterica


name: Col-0 Adult Plants Infected with Pst DC3000 at 5dpi

text: live

text: Generic

text: Adult (~5 week old) Col-0 Arabidopsis thaliana plants grown under short day conditions infected with P. syringae DC3000. Tissue was collected 5 days post infection.

characteristic: description

text: Arabidopsis thaliana


name: Salmonella enterica subsp. enterica serovar Montevideo str. FSL_R8-4922

text: clinical/research

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

text: environmental/food/other

text: Generic

characteristic: biosamplemodel

characteristic: isolate

text: Montevideo

text: enterica


name: Salmonella enterica subsp. enterica serovar Montevideo str. N19965

text: poultry

text: live

text: Pathogen.env

text: environmental/food/other

text: Generic

text: chicken breast

characteristic: isolation source

text: chicken breast:FOODON_00002703

characteristic: ontological term

text: Montevideo

characteristic: serovar

text: Food

characteristic: source type

characteristic: strain

text: enterica


name: Salmonella enterica subsp. enterica serovar Montevideo str. 547736

characteristic: External Id

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Generic

text: Montevideo

text: enterica

characteristic: sub species


name: Salmonella enterica subsp. enterica serovar Montevideo str. 644129

text: animal feed

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: Generic

text: meat bone meal dry

text: meat and bone meal:FOODON_00002738|dry:pato_0001824

characteristic: organism

text: Montevideo

text: Animal feed

text: enterica

characteristic: title


name: Salmonella enterica subsp. arizonae serovar 41:z4,z23:- str. 01-0089

text: clinical/research

characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: Generic

characteristic: biosamplemodel

text: arizonae


HLA Run 1

text: Stanford University

text: live

text: Generic

text: Homo sapiens

text: High Throughput, High Fidelity HLA Genotyping With Deep Sequencing


HLA Run 2

text: Stanford University

text: live

text: Generic

text: Homo sapiens


name: Caenorhabditis elegans N2 early embryos – total RNA - library N2_EE_RZ-54

text: University of Washington Genome Sciences

text: live

text: Generic

text: C. elegans N2 early embryo. The N2_EE_RZ-54 sample is a biologically distinct sample from the earlier EE or N2_EE-2 samples. The sample was treated with ribozero. Dionna did the isolation and purification on worms she grew herself. The sample N2_EE_DSN-51 is this same ribozero sample now treated with DSN as well. See DCC project N2_EE_DSN-51 for a further description of that library. This is a Reinke N2 strain, treated with DNase and RNeasy, followed by column-base RiboZero, reverse transcription and library preparation. This sample is available through the modENCODE DCC (www.modencode.org) as: N2_EE_RZ-54 Local library name: N2_EE_RZ-54

characteristic: description

text: Caenorhabditis elegans

text: Caenorhabditis elegans N2 early embryos - total RNA - library N2_EE_RZ-54


name: Caenorhabditis elegans N2 larval L2- total RNA - library N2_L2_RZ-53

text: live

text: Generic

text: Illumina sequencing of C. elegans N2 larval L2 library, total RNA, RNAseq random fragment library Reinke N2 strain, treated with DNase and RNeasy, followed by column-base RiboZero, reverse transcription and library preparation. This sample is available through the modENCODE DCC (www.modencode.org) as: N2_L2_RZ-53 Local library name: N2_L2_RZ-53

text: Caenorhabditis elegans