text: live

text: Generic

text: Dr. Jeffrey Whitsett

text: Liver tissue

text: Mus musculus

text: Homogenized Mouse Liver

text: Mouse_Liver_FOXA2_rep4 (GAI)


status: PUBLIC

characteristic: External Id

text: Institute for Diabetes, Obesity, and Metabolism, University of Pennsylvania

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Dr. Jeffrey Whitsett

tag: attribute

characteristic: antibody provider

text: Gene Expr Patterns. 2004 Dec;5(2):193-208. Immunohistochemical localization of Foxa1 and Foxa2 in mouse embryos and adult tissues. Besnard V, Wert SE, Hull WM, Whitsett JA.

characteristic: antibody reference

text: Liver tissue

characteristic: cell type

characteristic: chip antibody

text: Mus musculus

characteristic: organism

text: Homogenized Mouse Liver

characteristic: strain

text: Mouse_Liver_FOXA2_rep4 (GAII)

characteristic: title


text: live

text: Generic

text: Liver tissue

text: Mus musculus

text: Homogenized Mouse Liver

text: Mouse_Liver_Input_rep1 (GAI)


text: live

text: Generic

text: Liver tissue

text: Mus musculus

text: Homogenized Mouse Liver

text: Mouse_Liver_Input_rep2 (GAI)


text: live

text: Generic

text: Liver tissue

text: Mus musculus

text: Homogenized Mouse Liver

text: Mouse_Liver_Input_rep3 (GAI)


text: live

text: Generic

characteristic: antibody catalog number

text: Santa Cruz Biotechnology

characteristic: antibody vendor

text: Simpson Golabi Behmel Syndrome (SGBS) human adi- pocytes

text: PPARgamma

text: Homo sapiens

text: Human Adipocytes

text: Human_Adipocytes_PPARg_rep1 (GAII)


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: Santa Cruz Biotechnology

text: PPARgamma

text: Homo sapiens

text: Human Adipocytes

text: Human_Adipocytes_PPARg_rep2 (GAII)


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Homo sapiens

text: Human Adipocytes

text: Human_Adipocytes_Input_rep1 (GAII)


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Santa Cruz Biotechnology

text: Cultured Adipocytes

text: PPARgamma

text: Mus musculus

text: Mouse 3T3-L1 Adipocyte Culture

text: Mouse_Adipocytes_PPARg_rep2 (GAII)


Tttrout_MOM brain

text: INRA

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 100 MOM (monosex males) of 47 daf (days after fertilization) rainbow trouts were anesthetized in ice. Brains were rapidly removed and immediately frozen in liquid nitrogen, then stored at -80°C. Total RNA was extracted using TRizol (Invitrogen, Cergy-Pontoise, France) according to the manufacturer's instructions. Total RNA yield was estimated by using a Nanodrop 1000 spectrophotometer (Labtech, Palaiseau, France) and RNA quality was checked with an Agilent Bioanalyzer (Agilent Technologies, Massy, France). Only good quality total RNA (RNA Integrity Number (RIN)&gt;8) were selected. Total RNA from several extractions were pooled to minimize the impact of biological variance and to have a large quantity necessary to the library preparation. mRNA were then isolated from 250µg of total RNA using the Nucleotrap® mRNA kit (Macherey-Nagel, Hoerdt, France) as described in the manufacturer's manual, except for the elution procedure (40µl prewarmed (68°C) H2O for 40µl Oligo(dT) latex beads used, 3 rounds of elution). Quality of mRNA and depletion in ribosomal RNA were checked with the Agilent Bioanalyzer (Agilent Technologies, Massy, France). Different isolations of mRNA were made per sample, pooled and then ethanol precipitated overnight (2 vol of cold absolute ETOH, 1/10 vol of 3M pH5.2 Sodium Acetate and 20µg of glycogen). Double stranded cDNA were prepared as described by Leroux et al. [2010] using a modified protocol of the SuperScript Double-Stranded cDNA Synthesis Kit (Invitrogen, Cergy-Pontoise, France). Briefly, a modified primer (5' GAGAGAGAGACTGGAG(T)16VN 3') containing the GsuI restriction site and methylated dCTP (10mM dm5CTP, Fermentas, Saint-Remy-les-Chevreuse, France) were used during the first strand cDNA synthesis. First strand was synthesized from 3µg of mRNA. Next steps (second strand synthesis, RNase I digestion, phenol/chloroform extraction and ethanol precipitation) were proceeded according to the manufacturer's instructions. Pellets were resuspended in 9µl of water. 3 to 5 independent synthesis were made for each sample and pooled in order to obtain a total of 3.9µg. Then, the double-stranded cDNA was digested by GsuI (5U) to remove the polyA tail for 90min at 30°C. cDNAs were quantified using Quant-iT PicoGreen kit (Invitrogen, Cergy-Pontoise, France).

characteristic: description

text: Oncorhynchus mykiss

text: Non-normalised cDNA from Oncorhynchus mykiss MOM brain


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

characteristic: SRA accession

text: Escherichia coli K-12

characteristic: sample number

text: Generic sample from Escherichia coli str. K-12 substr. MG1655


name: Maruca midgut and salivary gland transcripts

text: Purdue University

text: live

text: Generic

text: Midgut and Salivary gland cDNA SRA

text: Maruca vitrata

text: Maruca midgut salivary expressed sequence tags


text: INRA

text: live

text: Generic

text: Matured post-vitellogenic female were over-anesthetized in 2-phenoxyethanol and the ovary dissected out of the body cavity under sterile conditions. A part of the ovary was dissected and deyolked. Ovarian aliquots were frozen in liquid and stored à -80°C. Total RNA was extracted using TRizol (Invitrogen, Cergy-Pontoise, France) according to the manufacturer's instructions. Total RNA yield was estimated by using a Nanodrop 1000 spectrophotometer (Labtech, Palaiseau, France) and RNA quality was checked with an Agilent Bioanalyzer (Agilent Technologies, Massy, France). Only good quality total RNA (RNA Integrity Number (RIN)&gt;8) were selected. Total RNA from 6 extractions were pooled to minimize the impact of biological variance and to have a large quantity necessary to the library preparation. mRNA were then isolated from 250µg of total RNA using the Nucleotrap® mRNA kit (Macherey-Nagel, Hoerdt, France) as described in the manufacturer's manual, except for the elution procedure (40µl prewarmed (68°C) H2O for 40µl Oligo(dT) latex beads used, 3 rounds of elution). Quality of mRNA and depletion in ribosomal RNA were checked with the Agilent Bioanalyzer (Agilent Technologies, Massy, France). Different isolations of mRNA were made per sample, pooled and then ethanol precipitated overnight (2 vol of cold absolute ETOH, 1/10 vol of 3M pH5.2 Sodium Acetate and 20µg of glycogen). Double stranded cDNA were prepared as described by Leroux et al. [2010] using a modified protocol of the SuperScript Double-Stranded cDNA Synthesis Kit (Invitrogen, Cergy-Pontoise, France). Briefly, a modified primer (5' GAGAGAGAGACTGGAG(T)16VN 3') containing the GsuI restriction site and methylated dCTP (10mM dm5CTP, Fermentas, Saint-Remy-les-Chevreuse, France) were used during the first strand cDNA synthesis. First strand was synthesized from 3µg of mRNA. Next steps (second strand synthesis, RNase I digestion, phenol/chloroform extraction and ethanol precipitation) were proceeded according to the manufacturer's instructions. Pellets were resuspended in 9µl of water. 3 independent synthesis were made for each sample and pooled in order to obtain a total of 5µg. Then, the double-stranded cDNA was digested by GsuI (5U) to remove the polyA tail for 90min at 30°C. cDNAs were quantified using Quant-iT PicoGreen kit (Invitrogen, Cergy-Pontoise, France).

text: Oncorhynchus mykiss

text: Non-normalised cDNA from matured post-vitellogenic Oncorhynchus mykiss oocytes


PV

text: Institut National de la Recherche Agronomique

text: live

text: Generic

text: Pseudococcus viburni

text: Pseudococcus viburni


VC

text: live

text: Generic

text: Venturia canescens microsatellite enriched library 454 Titanium sequencing See Malausa et al 2011 in press

text: Venturia canescens


BX

text: live

text: Generic

text: Bursaphelenchus xylophilus microsatellite enriched library 454 Titanium sequencing See Malausa et al. 2011, in press

text: Bursaphelenchus xylophilus

text: Bursaphelenchus xylophilus


Peach

text: CSHL

text: live

text: Generic

text: Illumina whole genome sequence data for peach

text: Prunus persica var. persica

text: Peach whole genome sequencing

text: persica

characteristic: variety


DVV

text: live

text: Generic

text: Diabrotica virgifera microsatellite enriched library 454 Titanium sequencing See Malausa et al 2011 in press

text: Diabrotica virgifera

characteristic: organism


cowpea thrips Burkina

text: Purdue University

text: live

text: Generic

text: Megalurothrips

text: 454 EST reads from cowpea thrips samples collected in Burkina Faso


text: live

text: Generic

text: Pisolithus microcarpus 441

text: Pisolithus microcarpus 441

characteristic: strain

text: Generic sample from Pisolithus microcarpus 441


text: INRA

text: live

text: Generic

text: Non-matured post-vitellogenic female were over-anesthetized in 2-phenoxyethanol and the ovary dissected out of the body cavity under sterile conditions. A part of the ovary was dissected and deyolked. Ovarian aliquots were frozen in liquid and stored à -80°C. Total RNA was extracted using TRizol (Invitrogen, Cergy-Pontoise, France) according to the manufacturer's instructions. Total RNA yield was estimated by using a Nanodrop 1000 spectrophotometer (Labtech, Palaiseau, France) and RNA quality was checked with an Agilent Bioanalyzer (Agilent Technologies, Massy, France). Only good quality total RNA (RNA Integrity Number (RIN)&gt;8) were selected. Total RNA from 6 extractions were pooled to minimize the impact of biological variance and to have a large quantity necessary to the library preparation. mRNA were then isolated from 250µg of total RNA using the Nucleotrap® mRNA kit (Macherey-Nagel, Hoerdt, France) as described in the manufacturer's manual, except for the elution procedure (40µl prewarmed (68°C) H2O for 40µl Oligo(dT) latex beads used, 3 rounds of elution). Quality of mRNA and depletion in ribosomal RNA were checked with the Agilent Bioanalyzer (Agilent Technologies, Massy, France). Different isolations of mRNA were made per sample, pooled and then ethanol precipitated overnight (2 vol of cold absolute ETOH, 1/10 vol of 3M pH5.2 Sodium Acetate and 20µg of glycogen). Double stranded cDNA were prepared as described by Leroux et al. [2010] using a modified protocol of the SuperScript Double-Stranded cDNA Synthesis Kit (Invitrogen, Cergy-Pontoise, France). Briefly, a modified primer (5' GAGAGAGAGACTGGAG(T)16VN 3') containing the GsuI restriction site and methylated dCTP (10mM dm5CTP, Fermentas, Saint-Remy-les-Chevreuse, France) were used during the first strand cDNA synthesis. First strand was synthesized from 3µg of mRNA. Next steps (second strand synthesis, RNase I digestion, phenol/chloroform extraction and ethanol precipitation) were proceeded according to the manufacturer's instructions. Pellets were resuspended in 9µl of water. 3 independent synthesis were made for each sample and pooled in order to obtain a total of 4,9µg. Then, the double-stranded cDNA was digested by GsuI (5U) to remove the polyA tail for 90min at 30°C. cDNAs were quantified using Quant-iT PicoGreen kit (Invitrogen, Cergy-Pontoise, France).

text: Oncorhynchus mykiss

text: Non-normalised cDNA from non-matured post-vitellogenic Oncorhynchus mykiss oocytes

characteristic: title


text: University of Helsinki

text: live

text: Generic

text: uncultured fungus

text: Fungal DNA


text: Laboratory of Epigenome Biology, Systems Biology Center, NHLBI/NIH

text: live

text: Generic

characteristic: cadaver donor

text: pancreatic islets

characteristic: cell type

text: Homo sapiens

text: Pancreatic islets


characteristic: External Id

text: INRA

text: live

text: Generic

text: Gills were sampled from 10 fish. Total RNA was extracted using TRizol (Invitrogen, Cergy-Pontoise, France) according to the manufacturer's instructions. Total RNA yield was estimated by using a Nanodrop 1000 spectrophotometer (Labtech, Palaiseau, France) and RNA quality was checked with an Agilent Bioanalyzer (Agilent Technologies, Massy, France). Only good quality total RNA (RNA Integrity Number (RIN)&gt;8) were selected. Total RNA from 10 extractions were pooled to minimize the impact of biological variance and to have a large quantity necessary to the library preparation. This pool was purified with the NucleoSpin® RNA II kit (Macherey-Nagel, Hoerdt, France) according to the protocol Clean-up of RNA from reaction mixtures. This purification was made from 200µg of the Total RNA mix and the elution was done twice with 70µl H2O (2 successives elutions). mRNA were then isolated from 250µg of total RNA using the Nucleotrap® mRNA kit (Macherey-Nagel, Hoerdt, France) as described in the manufacturer's manual, except for the elution procedure (40µl prewarmed (68°C) H2O for 40µl Oligo(dT) latex beads used, 3 rounds of elution). Quality of mRNA and depletion in ribosomal RNA were checked with the Agilent Bioanalyzer (Agilent Technologies, Massy, France). Different isolations of mRNA were made per sample, pooled and then ethanol precipitated overnight (2 vol of cold absolute ETOH, 1/10 vol of 3M pH5.2 Sodium Acetate and 20µg of glycogen). Double stranded cDNA were prepared as described by Leroux et al. [2010] using a modified protocol of the SuperScript Double-Stranded cDNA Synthesis Kit (Invitrogen, Cergy-Pontoise, France). Briefly, a modified primer (5' GAGAGAGAGACTGGAG(T)16VN 3') containing the GsuI restriction site and methylated dCTP (10mM dm5CTP, Fermentas, Saint-Remy-les-Chevreuse, France) were used during the first strand cDNA synthesis. First strand was synthesized from 3µg of mRNA. Next steps (second strand synthesis, RNase I digestion, phenol/chloroform extraction and ethanol precipitation) were proceeded according to the manufacturer's instructions. Pellets were resuspended in 9µl of water. 5 independent synthesis were made for each sample and pooled in order to obtain a total of 3.2µg. Then, the double-stranded cDNA was digested by GsuI (5U) to remove the polyA tail for 90min at 30°C. cDNAs were quantified using Quant-iT PicoGreen kit (Invitrogen, Cergy-Pontoise, France).

text: Oncorhynchus mykiss

text: Non-normalised cDNA from Oncorhynchus mykiss gills II


text: INRA

characteristic: INSDC center name

text: live

text: Generic

text: Gills were sampled from 10. Total RNA was extracted using TRizol (Invitrogen, Cergy-Pontoise, France) according to the manufacturer's instructions. Total RNA yield was estimated by using a Nanodrop 1000 spectrophotometer (Labtech, Palaiseau, France) and RNA quality was checked with an Agilent Bioanalyzer (Agilent Technologies, Massy, France). Only good quality total RNA (RNA Integrity Number (RIN)&gt;8) were selected. Total RNA from 7 extractions were pooled to minimize the impact of biological variance and to have a large quantity necessary to the library preparation. This pool was purified with the NucleoSpin® RNA II kit (Macherey-Nagel, Hoerdt, France) according to the protocol Clean-up of RNA from reaction mixtures. This purification was made from 200µg of the Total RNA mix and the elution was done twice with 70µl H2O (2 successives elutions). mRNA were then isolated from 250µg of total RNA using the Nucleotrap® mRNA kit (Macherey-Nagel, Hoerdt, France) as described in the manufacturer's manual, except for the elution procedure (40µl prewarmed (68°C) H2O for 40µl Oligo(dT) latex beads used, 3 rounds of elution). Quality of mRNA and depletion in ribosomal RNA were checked with the Agilent Bioanalyzer (Agilent Technologies, Massy, France). Different isolations of mRNA were made per sample, pooled and then ethanol precipitated overnight (2 vol of cold absolute ETOH, 1/10 vol of 3M pH5.2 Sodium Acetate and 20µg of glycogen). Double stranded cDNA were prepared as described by Leroux et al. [2010] using a modified protocol of the SuperScript Double-Stranded cDNA Synthesis Kit (Invitrogen, Cergy-Pontoise, France). Briefly, a modified primer (5' GAGAGAGAGACTGGAG(T)16VN 3') containing the GsuI restriction site and methylated dCTP (10mM dm5CTP, Fermentas, Saint-Remy-les-Chevreuse, France) were used during the first strand cDNA synthesis. First strand was synthesized from 3µg of mRNA. Next steps (second strand synthesis, RNase I digestion, phenol/chloroform extraction and ethanol precipitation) were proceeded according to the manufacturer's instructions. Pellets were resuspended in 9µl of water. 5 independent synthesis were made for each sample and pooled in order to obtain a total of 3.3µg. Then, the double-stranded cDNA was digested by GsuI (5U) to remove the polyA tail for 90min at 30°C. cDNAs were quantified using Quant-iT PicoGreen kit (Invitrogen, Cergy-Pontoise, France).

text: Oncorhynchus mykiss

text: Non-normalised cDNA from Oncorhynchus mykiss gills I


text: University of Michigan

characteristic: INSDC first public

text: live

text: Generic

text: Homo sapiens

text: DU145 Cell Line


PrCa

text: University of Michigan

characteristic: INSDC last update

text: live

text: Generic

text: Homo sapiens

text: Prostate Cancer tissue sample


RWPE

text: University of Michigan

characteristic: INSDC secondary accession

text: live

text: Generic

text: Homo sapiens

text: RWPE Cell Line


VCaP

text: University of Michigan

text: live

characteristic: INSDC status

text: Generic

text: Homo sapiens

text: VCaP Cell Line


Nipponbare

text: CSHL

text: live

text: Generic

characteristic: NCBI submission model

text: Illumina whole genome sequencing of Nippobare rice

text: Oryza sativa Japonica Group

text: Whole genome sequencing for Nipponbare rice


I

text: LSBI

text: live

text: Generic

characteristic: NCBI submission package

text: Miscanthus x giganteus

text: Illinois


F

text: LSBI

text: live

text: Generic

text: Miscanthus floridulus

text: M. floridulus


FO

text: LSBI

text: live

text: Generic

text: Miscanthus x giganteus

text: Freedom, original


FF

text: LSBI

text: live

text: Generic

text: Miscanthus x giganteus

text: Freedom, field


FN

text: LSBI

text: live

text: Generic

text: Miscanthus x giganteus

text: Freedom, nursery


C

text: LSBI

text: live

text: Generic

text: Miscanthus x giganteus

text: Canada


MS

text: LSBI

text: live

text: Generic

text: Miscanthus sinensis

text: M. sinensis


text: Systems Biology Division, ZCNI, ZheJiang University

text: live

text: Generic

text: Homo sapiens

characteristic: paired sample id

text: Liver tissues, Cancer

text: Cancer

characteristic: tissue type

text: HBV

characteristic: virus infection


text: live

text: Generic

characteristic: SRA accession

text: Homo sapiens

text: Liver tissues, Non-cancerous adjacent

text: Non-cancerous

text: HBV


Library 2

text: Stanford University

text: live

text: Generic

text: Second copy of chromosome 6 of P0 (patient zero) (library 2). This single copy of chromosome 6 was amplified with multiple strand displacement and converted into Illumina sequencing library.

characteristic: description

text: Homo sapiens

characteristic: organism

text: Amplified materials from a single copy of Patient Zero's chromosome 6 (second copy)


Library 3

text: Stanford University

text: live

text: Generic

text: Third copy of chromosome 6 of P0 (patient zero) (library 3). This single copy of chromosome 6 was amplified with multiple strand displacement and converted into Illumina sequencing library.

text: Homo sapiens

text: Amplified materials from a single copy of Patient Zero's chromosome 6 (third copy)

characteristic: title


pinaster-stress-A

text: INRA

text: live

text: Generic

text: A cDNA library was generated using total RNA extracted from quiescent buds harvested on 2 years old maritime pine (fast growing family) in well watered or drought stress conditions. The library was subjected to high throughput sequencing on a 454 Titanium platform.

text: Pinus pinaster

text: quiescent buds from fast growing maritime pine family


pinaster-stress-NA

text: INRA

text: live

text: Generic

text: A cDNA library was generated using total RNA extracted from quiescent buds harvested on 2 years old maritime pine (low growing family) in well watered or drought stress conditions. The library was subjected to high throughput sequencing on a 454 Titanium platform.

text: Pinus pinaster

text: quiescent buds from low growing maritime pine family


text: WTCCB, The University of Edinburgh

text: live

text: Generic

text: Dendritic cells

text: MBD affinity column

characteristic: mbd affinity column/chip antibody

text: Mus musculus

text: Male+female

characteristic: sex

text: Dendritic cells MAP-seq

characteristic: strain


characteristic: External Id

text: WTCCB, The University of Edinburgh

characteristic: INSDC center name

text: live

text: Generic

text: B cells

characteristic: cell type

text: MBD affinity column

text: Mus musculus

text: Male+female

text: B cells MAP-seq


text: WTCCB, The University of Edinburgh

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: CD4 T cells

text: MBD affinity column

text: Mus musculus

text: male

text: CD4 T cells MAP-seq


text: WTCCB, The University of Edinburgh

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: CD4 T cells

text: MBD affinity column

text: Mus musculus

text: Male+female

text: CD4 T cells MAP-seq


text: WTCCB, The University of Edinburgh

text: live

text: Generic

text: Th1 cells

text: MBD affinity column

text: Mus musculus

text: Male+female

text: Th1 cells MAP-seq


text: WTCCB, The University of Edinburgh

text: live

text: Generic

text: Th2 cells

text: MBD affinity column

text: Mus musculus

text: Male+female

text: Th2 cells MAP-seq


text: WTCCB, The University of Edinburgh

text: live

text: Generic

text: Dendritic cells

text: anti-H3K4me3 (07-473; Millipore)

text: Mus musculus

text: Male+female

text: Dendritic cells H3K4me3 ChIP-seq


text: WTCCB, The University of Edinburgh

text: live

text: Generic

text: Th1 cells

text: anti-H3K4me3 (07-473; Millipore)

text: Mus musculus

text: Male+female

text: Th1 cells H3K4me3 ChIP-seq


text: INRA

text: live

text: Generic

text: Acyrthosiphon pisum

text: Head transcriptome of the LSR1 adult pea aphid genotype, under short day.


text: INRA

text: live

text: Generic

text: Acyrthosiphon pisum

text: Head transcriptome of the L121 adult pea aphid genotype, under short day.


text: UC Davis

text: live

text: Generic

characteristic: cell line

text: neuronal cells

text: Homo sapiens

text: SH-SY5Y cells


text: UC Davis

text: live

text: Generic

characteristic: SRA accession

text: 113 days old

characteristic: age

text: Homo sapiens

text: male

text: cerebral cortex

text: cerebral cortex, BA9

characteristic: tissue

text: NICHD Brain and Tissue Bank for Developmental Disorders at the University of Maryland, Baltimore, MD

characteristic: tissue source


text: Helicos BioSciences Corporation

text: live

text: Generic

text: Polyadenylated RNA fraction isolated from human Brain RNA purchased from Clontech

characteristic: description

text: Homo sapiens

characteristic: organism

text: Generic sample from Homo sapiens

characteristic: title


characteristic: External Id

text: Helicos BioSciences Corporation

text: live

text: Generic

text: rRNA-depleted RNA fraction isolated from human Brain RNA purchased from Clontech

text: Homo sapiens

text: Generic sample from Homo sapiens


text: Helicos BioSciences Corporation

characteristic: INSDC center name

text: live

text: Generic

text: Total RNA fraction isolated from human Brain RNA purchased from Clontech

text: Homo sapiens

text: Generic sample from Homo sapiens


text: Helicos BioSciences Corporation

text: live

text: Generic

text: Polyadenylated RNA fraction isolated from human Liver RNA purchased from Clontech

text: Homo sapiens

text: Generic sample from Homo sapiens


text: Helicos BioSciences Corporation

text: live

text: Generic

text: rRNA-depleted RNA fraction isolated from human Liver RNA purchased from Clontech

text: Homo sapiens

text: Generic sample from Homo sapiens


text: Helicos BioSciences Corporation

text: live

text: Generic

text: Total RNA fraction isolated from human Liver RNA purchased from Clontech

text: Homo sapiens

text: Generic sample from Homo sapiens


text: Helicos BioSciences Corporation

text: live

text: Generic

text: Polyadenylated RNA fraction isolated from human K562 RNA purchased from Ambion

text: Homo sapiens

text: Generic sample from Homo sapiens


text: Helicos BioSciences Corporation

text: live

text: Generic

text: rRNA-depleted RNA fraction isolated from human K562 RNA purchased from Ambion

text: Homo sapiens

text: Generic sample from Homo sapiens


text: Helicos BioSciences Corporation

text: live

text: Generic

text: Total RNA fraction isolated from human K562 RNA purchased from Ambion

text: Homo sapiens

text: Generic sample from Homo sapiens


text: Helicos BioSciences Corporation

text: live

text: Generic

text: rRNA-depleted RNA fraction isolated from Ewing Cell line CHLA-9 derived from a primary tumor

text: Homo sapiens

text: Generic sample from Homo sapiens


text: Helicos BioSciences Corporation

text: live

text: Generic

text: rRNA-depleted RNA fraction isolated from Ewing Cell line CHLA-10 derived from a metastitic tumor of the same patient as CHLA-9

text: Homo sapiens

text: Generic sample from Homo sapiens


text: Helicos BioSciences Corporation

text: live

text: Generic

text: rRNA-depleted RNA fraction isolated from Ewing primary tumor of patient #2

text: Homo sapiens

text: Generic sample from Homo sapiens


text: Helicos BioSciences Corporation

text: live

text: Generic

text: rRNA-depleted RNA fraction isolated from Ewing mestastatic tumor of patient #2

text: Homo sapiens

text: Generic sample from Homo sapiens


text: Helicos BioSciences Corporation

text: live

text: Generic

text: rRNA-depleted RNA fraction isolated from Ewing primary tumor of patient #3

text: Homo sapiens

text: Generic sample from Homo sapiens


text: Helicos BioSciences Corporation

text: live

text: Generic

text: rRNA-depleted RNA fraction isolated from Ewing mestastatic tumor of patient #4

text: Homo sapiens

text: Generic sample from Homo sapiens


text: OHSU

text: live

text: Generic

text: Mus musculus

text: D2 lane 1 experiment 4


text: OHSU

text: live

text: Generic

text: Mus musculus

text: D2 lane 2 experiment 4


text: OHSU

text: live

text: Generic

text: Mus musculus

text: D2 lane 3 experiment 4


text: OHSU

text: live

text: Generic

text: Mus musculus

text: D2 lane 5 experiment 4


text: OHSU

text: live

text: Generic

text: Mus musculus

text: B6 lane 6 experiment 4


text: OHSU

text: live

text: Generic

text: Mus musculus

text: B6 lane 7 experiment 4


text: OHSU

text: live

text: Generic

text: Mus musculus

text: B6 lane 8 experiment 4


text: OHSU

text: live

text: Generic

text: Mus musculus

text: B6 lane 1 experiment 6


text: OHSU

text: live

text: Generic

text: Mus musculus

text: B6 lane 2 experiment 6


text: OHSU

text: live

text: Generic

text: Mus musculus

text: B6 lane 3 experiment 6


text: OHSU

text: live

text: Generic

text: Mus musculus

text: B6 lane 5 experiment 6


text: OHSU

text: live

text: Generic

text: Mus musculus

text: D2 lane 6 experiment 6


text: OHSU

text: live

text: Generic

text: Mus musculus

text: D2 lane 7 experiment 6


text: OHSU

text: live

text: Generic

text: Mus musculus

text: D2 lane 8 experiment 6


text: OHSU

text: live

text: Generic

text: Mus musculus

text: B6 lane 1 experiment 7


text: OHSU

text: live

text: Generic

text: Mus musculus

text: B6 lane 2 experiment 7


text: OHSU

text: live

text: Generic

text: Mus musculus

text: B6 lane 3 experiment 7


text: OHSU

text: live

text: Generic

text: Mus musculus

text: D2 lane 5 experiment 7


text: OHSU

text: live

text: Generic

text: Mus musculus

text: D2 lane 6 experiment 7


text: OHSU

text: live

text: Generic

text: Mus musculus

text: D2 lane 7 experiment 7


text: OHSU

text: live

text: Generic

text: Mus musculus

text: D2 lane 8 experiment 7


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Desulfotomaculum kuznetsovii DSM 6115

text: Desulfofundulus kuznetsovii DSM 6115

characteristic: sample number

text: DSM 6115

characteristic: strain

text: Generic sample from Desulfotomaculum kuznetsovii DSM 6115

text: type strain of Desulfofundulus kuznetsovii

characteristic: type material


PRJNA28331.Eubacteriaceae bacterium CM2

text: Broad Institute

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: CM

characteristic: Isolate, name or label

text: Generic

characteristic: collection date

text: bacterial biomass

characteristic: isolation source

text: Peptoanaerobacter stomatis

text: Eubacteriaceae bacterium CM2

characteristic: sample name

text: Generic sample from Eubacteriaceae bacterium CM2


PRJNA38063.E. coli H494

text: Broad Institute

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: bi gssr sample id

characteristic: bi gssr sample lsid

text: Genomic DNA

characteristic: bi gssr sample type

text: Homo sapiens

characteristic: host species

text: Escherichia coli H494

text: E. coli H494

characteristic: sample id

text: E. coli H494 Genomic DNA sample 78536.0


PRJNA38063.E. coli E101

characteristic: External Id

text: Broad Institute

characteristic: INSDC center name

text: live

text: Generic

text: Genomic DNA

text: Environmenta/Water

text: Escherichia coli E101

characteristic: organism

text: E. coli E101

characteristic: strain

text: E. coli E101 Genomic DNA sample 78533.0

characteristic: title


PRJNA38063.E. coli B1167

text: Avian

characteristic: Host Species

text: Broad Institute

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Genomic DNA

text: Escherichia coli B1167

text: E. coli B1167

text: E. coli B1167 Genomic DNA Sample 78534.0


PRJNA38063.E. coli H260

text: Homo sapiens

text: Broad Institute

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Genomic DNA

text: Escherichia coli H260

text: E. coli H260

text: E. coli H260 Genomic DNA Sample 78535.0


text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Desulfurococcus fermentans DSM 16532

characteristic: description

text: Desulfurococcus amylolyticus DSM 16532

characteristic: sample number

text: DSM 16532

text: Generic sample from Desulfurococcus fermentans DSM 16532


text: Broad Institute

text: live

text: AC

characteristic: Isolate, name or label

text: Generic

characteristic: collection date

text: bacterial biomass

characteristic: isolation source

text: Peptoanaerobacter stomatis

text: Eubacteriaceae bacterium ACC19a

characteristic: sample name

text: Generic sample from Eubacteriaceae bacterium ACC19a


PRJNA28331.Eubacteriaceae bacterium CM5

characteristic: External Id

text: Broad Institute

characteristic: INSDC center name

text: live

text: CM

text: Generic

text: bacterial biomass

text: Peptoanaerobacter stomatis

characteristic: organism

text: Eubacteriaceae bacterium CM5

text: Generic sample from Eubacteriaceae bacterium CM5


uc82 _rp75/59

text: Comav upv

text: live

text: Generic

text: Illumina reads obtained from a normalized cDNA library, built with an equimolar mix of floral RNA extracted from the tomato lines UC-82 and RP75/79

text: Solanum lycopersicum

text: uc82 _rp75/59 flower transcriptome

characteristic: title


text: MCDB, Yale University

characteristic: INSDC first public

text: live

text: Generic

text: Day1 post-L4 molt

characteristic: developmental stage

text: 20 °C

characteristic: growth condition

text: Caenorhabditis elegans

text: Day 1 wild-type young adult, untreated control

text: wild-type N2_hermaphrodites

characteristic: strain

text: no stress treatment

characteristic: stress conditions


text: MCDB, Yale University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Day1 post-L4 molt

text: 20 °C

text: Caenorhabditis elegans

text: Day 1 wild-type young adult with heat shock treatment

text: wild-type N2_hermaphrodites

text: heat shock at 32 °C for 6 hrs


text: MCDB, Yale University

text: live

text: Generic

characteristic: SRA accession

text: Day1 post-L4 molt

text: 20 °C

text: Caenorhabditis elegans

text: Day 1 wild-type young adult with PA14 exposure

text: wild-type N2_hermaphrodites

text: PA14 exposure for 12 hrs


text: MCDB, Yale University

text: live

text: Generic

text: developmentally arrested L1

text: 20 °C

text: Caenorhabditis elegans

text: wild-type L1 arrest

text: wild-type N2_hermaphrodites

text: L1s without food for 48 hrs


text: Beijing Forestry University

text: live

text: Generic

text: Populus euphratica

text: drought treatment samples

text: leaves

characteristic: tissue

text: Group C


text: Beijing Forestry University

text: live

text: Generic

text: Populus euphratica

text: normal growth condition

text: leaves

text: Control


PRJNA167910.A. burtoni ID#24_Hofmann

text: Broad Institute

text: live

text: Generic

text: Female

characteristic: host sex

text: Haplochromis burtoni

text: A. burtoni ID#24_Hofmann

characteristic: sample name

text: Generic sample from Haplochromis burtoni


PRJNA167910.M. zebra #2_Kocher

characteristic: External Id

text: Broad Institute

characteristic: INSDC center name

text: live

text: Generic

characteristic: isolate

text: Maylandia zebra

text: female

characteristic: sex

text: wild caught

text: muscle + heart

text: Generic sample from Maylandia zebra


text: J. Craig Venter Institute

characteristic: INSDC first public

text: live

text: Generic

text: 352: Elliot Crater Vent

characteristic: description

text: ecological metagenomes

characteristic: organism

text: Generic sample from ecological metagenomes

characteristic: title


text: J. Craig Venter Institute

characteristic: INSDC last update

text: live

text: Generic

text: 344: Southeast Arm 3m Photic 2007

text: ecological metagenomes


text: J. Craig Venter Institute

characteristic: INSDC secondary accession

text: live

text: Generic

text: 350: Mary Bay Mixing

text: ecological metagenomes


text: J. Craig Venter Institute

text: live

characteristic: INSDC status

text: Generic

text: 339: West Thumb Otter Mixing

text: ecological metagenomes


text: J. Craig Venter Institute

text: live

text: Generic

characteristic: NCBI submission model

text: 354: Southeast Arm

text: ecological metagenomes


text: J. Craig Venter Institute

text: live

text: Generic

characteristic: NCBI submission package

text: 333: West Thumb Otter Vent

text: ecological metagenomes


text: J. Craig Venter Institute

text: live

text: Generic

characteristic: SRA accession

text: 334: West Thumb Otter Mixing

text: ecological metagenomes


text: J. Craig Venter Institute

text: live

text: Generic

text: 328: Inflated Plain Mixing

text: ecological metagenomes


text: J. Craig Venter Institute

text: live

text: Generic

text: 364: West Thumb Cone Vent

text: ecological metagenomes


text: J. Craig Venter Institute

text: live

text: Generic

text: 353: Elliot Crater Mixing

text: ecological metagenomes


PRJNA167910.N.brichardi 1_Salsburger

text: Broad Institute

text: live

text: Generic

text: Neolamprologus brichardi

text: N.brichardi 1_Salsburger

text: Generic sample from Neolamprologus brichardi


Sir4_ChIP_1 737

text: UC-Berkeley

text: live

text: Generic

text: Sir4 ChIP from S. cerevisiae/S. bayanus hybrid diploid. 737 = Sc-SIR4/Sb-SIR4-13xMyc;

text: Saccharomyces bayanus

text: Sir4 hybrid ChIP sample 737


Sir4_ChIP_1 738

text: UC-Berkeley

text: live

text: Generic

text: Sir4 ChIP from S. cerevisiae/S. bayanus hybrid diploid. 738 = Sb-SIR4/Sb-SIR4-13xMyc;

text: Saccharomyces bayanus

text: Sir4 hybrid ChIP sample 738


Sir4_ChIP_1 884

text: UC-Berkeley

text: live

text: Generic

text: Sir4 ChIP from S. cerevisiae/S. bayanus hybrid diploid. 884 = Sc-SIR4-13xMyc/Sc-SIR4;

text: Saccharomyces bayanus

text: Sir4 hybrid ChIP sample 884


Sir4_ChIP_1 660

text: UC-Berkeley

text: live

text: Generic

text: Sir4 ChIP from S. cerevisiae/S. bayanus hybrid diploid. 660 = Sc-SIR4/Sb-SIR4 (No tag)

text: Saccharomyces bayanus

text: Sir4 hybrid ChIP sample 660


text: J. Craig Venter Institute

text: live

text: Generic

text: 365: West Thumb Cone Mixing

text: ecological metagenomes


text: J. Craig Venter Institute

text: live

text: Generic

text: 359: Inflated Plain Vent

text: ecological metagenomes


text: J. Craig Venter Institute

text: live

text: Generic

text: 355: Southeast Arm

text: ecological metagenomes


text: J. Craig Venter Institute

text: live

text: Generic

text: 367: West Thumb Cone Photic

text: ecological metagenomes


text: J. Craig Venter Institute

text: live

text: Generic

text: 369: West Thumb Deep Vent

text: ecological metagenomes


text: J. Craig Venter Institute

text: live

text: Generic

text: 360: Inflated Plain Mixing

text: ecological metagenomes


text: J. Craig Venter Institute

text: live

text: Generic

text: 347: Inflated Plain Photic

text: ecological metagenomes


text: J. Craig Venter Institute

text: live

text: Generic

text: 347a: Inflated Plain Photic (3.0 micron filter)

text: ecological metagenomes


text: J. Craig Venter Institute

text: live

text: Generic

text: 348S: Inflated Plain Vent Streamer

text: ecological metagenomes


text: J. Craig Venter Institute

text: live

text: Generic

text: 349S: Mary Bay Vent Streamer

text: ecological metagenomes


text: J. Craig Venter Institute

text: live

text: Generic

text: 355b: Southeast Arm (0.8 micron filter)

text: ecological metagenomes


text: J. Craig Venter Institute

text: live

text: Generic

text: 347b: Inflated Plain Photic (0.8 micron filter)

text: ecological metagenomes


text: J. Craig Venter Institute

text: live

text: Generic

text: 370: West Thumb Deep Mixing

text: ecological metagenomes


text: J. Craig Venter Institute

text: live

text: Generic

text: 355a: Southeast Arm (3.0 micron filter)

text: ecological metagenomes


text: dbGaP

text: live

text: Generic

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: HMP

text: male

characteristic: isolation source

text: human metagenome

text: Control Set

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Human metagenome sample from primary_g_Stool of a male participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: HMP

text: male

characteristic: host sex

text: human metagenome

characteristic: organism

text: Control Set

text: HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: primary_o_Saliva (SAL)

text: HMP

text: male

text: primary_o_Saliva (SAL)

text: human metagenome

text: Control Set

text: Human metagenome sample from primary_o_Saliva (SAL) of a male participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)

characteristic: title


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: primary_o_Tongue dorsum (TONG)

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: HMP

text: male

text: primary_o_Tongue dorsum (TONG)

text: human metagenome

text: Control Set

text: Human metagenome sample from primary_o_Tongue dorsum (TONG) of a male participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

text: primary_o_Hard palate (HPAL)

text: HMP

text: male

text: primary_o_Hard palate (HPAL)

characteristic: isolation source

text: human metagenome

text: Control Set

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

text: Human metagenome sample from primary_o_Hard palate (HPAL) of a male participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: primary_o_Buccal mucosa (BUCC)

text: HMP

text: male

characteristic: host sex

text: primary_o_Buccal mucosa (BUCC)

text: human metagenome

text: Control Set

characteristic: submitter handle

text: Human metagenome sample from primary_o_Buccal mucosa (BUCC) of a male participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: HMP

text: male

text: human metagenome

characteristic: organism

text: Control Set

text: Human metagenome sample from primary_o_Attached/Keratinized gingiva (GING) of a male participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: primary_o_Palatine Tonsils(PTON)

characteristic: analyte type

characteristic: biospecimen repository

text: HMP

text: male

text: primary_o_Palatine Tonsils(PTON)

text: human metagenome

text: Control Set

text: Human metagenome sample from primary_o_Palatine Tonsils(PTON) of a male participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)

characteristic: title


text: dbGaP

text: live

text: Generic

characteristic: biospecimen repository sample id

text: HMP

text: male

characteristic: isolation source

text: human metagenome

text: Control Set

characteristic: study design

characteristic: study name

characteristic: submitted sample id

text: Human metagenome sample from primary_o_Throat(THRO) of a male participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: primary_o_Supragingival plaque (SUPRA)

text: HMP

text: male

characteristic: host sex

text: primary_o_Supragingival plaque (SUPRA)

text: human metagenome

text: Control Set

characteristic: submitted subject id

text: Human metagenome sample from primary_o_Supragingival plaque (SUPRA) of a male participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: primary_o_Subgingival plaque(SUB)

text: HMP

text: male

text: primary_o_Subgingival plaque(SUB)

text: human metagenome

text: Control Set

characteristic: submitter handle

text: Human metagenome sample from primary_o_Subgingival plaque(SUB) of a male participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: analyte type

characteristic: biospecimen repository

text: HMP

text: male

text: human metagenome

characteristic: organism

text: Control Set

text: Human metagenome sample from primary_s_L_Retroauricular crease (RAC_L) of a male participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

characteristic: biospecimen repository sample id

text: HMP

text: male

characteristic: isolation source

text: human metagenome

text: Control Set

characteristic: study design

characteristic: study name

text: Human metagenome sample from primary_s_R_Retroauricular crease (RAC_R) of a male participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: primary_s_L_Antecubital fossa (ACF_L)

text: HMP

text: male

characteristic: host sex

text: primary_s_L_Antecubital fossa (ACF_L)

text: human metagenome

text: Control Set

characteristic: submitted sample id

text: Human metagenome sample from primary_s_L_Antecubital fossa (ACF_L) of a male participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: primary_s_R_Antecubital fossa (ACF_R)

text: HMP

text: male

text: primary_s_R_Antecubital fossa (ACF_R)

text: human metagenome

text: Control Set

characteristic: submitted subject id

text: Human metagenome sample from primary_s_R_Antecubital fossa (ACF_R) of a male participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: primary_s_Anterior nares (NASAL)

characteristic: analyte type

characteristic: biospecimen repository

text: HMP

text: male

text: primary_s_Anterior nares (NASAL)

text: human metagenome

text: Control Set

characteristic: submitter handle

text: Human metagenome sample from primary_s_Anterior nares (NASAL) of a male participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

text: primary_v_Vaginal introitus (INTRO)

characteristic: biospecimen repository sample id

text: HMP

text: female

text: primary_v_Vaginal introitus (INTRO)

characteristic: isolation source

text: human metagenome

characteristic: organism

text: Control Set

characteristic: study design

characteristic: study name

text: Human metagenome sample from primary_v_Vaginal introitus (INTRO) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: primary_v_Mid vagina (MIDVAG)

text: HMP

text: female

characteristic: host sex

text: primary_v_Mid vagina (MIDVAG)

text: human metagenome

text: Control Set

text: Human metagenome sample from primary_v_Mid vagina (MIDVAG) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)

characteristic: title


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: primary_v_Posterior fornix (PFORN)

text: HMP

text: female

text: primary_v_Posterior fornix (PFORN)

text: human metagenome

text: Control Set

characteristic: submitted sample id

text: Human metagenome sample from primary_v_Posterior fornix (PFORN) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: analyte type

characteristic: biospecimen repository

text: HMP

text: female

text: human metagenome

text: Control Set

characteristic: submitted subject id

text: Human metagenome sample from G_DNA_Stool of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

characteristic: biospecimen repository sample id

text: HMP

text: female

characteristic: isolation source

text: human metagenome

characteristic: organism

text: Control Set

characteristic: study design

text: HMP Core Microbiome Sampling Protocol A (HMP-A)

characteristic: submitter handle


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: G_DNA_Vaginal introitus

text: HMP

text: female

characteristic: host sex

text: G_DNA_Vaginal introitus

text: human metagenome

text: Control Set

characteristic: study name

text: Human metagenome sample from G_DNA_Vaginal introitus of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: G_DNA_Mid vagina

text: HMP

text: female

text: G_DNA_Mid vagina

text: human metagenome

text: Control Set

text: Human metagenome sample from G_DNA_Mid vagina of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)

characteristic: title


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: G_DNA_Posterior fornix

characteristic: analyte type

characteristic: biospecimen repository

text: HMP

text: female

text: G_DNA_Posterior fornix

text: human metagenome

text: Control Set

characteristic: submitted sample id

text: Human metagenome sample from G_DNA_Posterior fornix of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

characteristic: biospecimen repository sample id

text: HMP

text: female

characteristic: isolation source

text: human metagenome

characteristic: organism

text: Control Set

characteristic: study design

characteristic: submitted subject id

text: Human metagenome sample from primary_g_Stool of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: primary_o_Saliva (SAL)

text: HMP

text: female

characteristic: host sex

text: primary_o_Saliva (SAL)

text: human metagenome

text: Control Set

characteristic: submitter handle

text: Human metagenome sample from primary_o_Saliva (SAL) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: primary_o_Tongue dorsum (TONG)

text: HMP

text: female

text: primary_o_Tongue dorsum (TONG)

text: human metagenome

text: Control Set

characteristic: study name

text: Human metagenome sample from primary_o_Tongue dorsum (TONG) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: primary_o_Hard palate (HPAL)

characteristic: analyte type

characteristic: biospecimen repository

text: HMP

text: female

text: primary_o_Hard palate (HPAL)

text: human metagenome

text: Control Set

text: Human metagenome sample from primary_o_Hard palate (HPAL) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)

characteristic: title


text: dbGaP

text: live

text: Generic

text: primary_o_Buccal mucosa (BUCC)

characteristic: biospecimen repository sample id

text: HMP

text: female

text: primary_o_Buccal mucosa (BUCC)

characteristic: isolation source

text: human metagenome

characteristic: organism

text: Control Set

characteristic: study design

characteristic: submitted sample id

text: Human metagenome sample from primary_o_Buccal mucosa (BUCC) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: HMP

text: female

characteristic: host sex

text: human metagenome

text: Control Set

characteristic: submitted subject id

text: Human metagenome sample from primary_o_Attached/Keratinized gingiva (GING) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: primary_o_Palatine Tonsils(PTON)

text: HMP

text: female

text: primary_o_Palatine Tonsils(PTON)

text: human metagenome

text: Control Set

characteristic: submitter handle

text: Human metagenome sample from primary_o_Palatine Tonsils(PTON) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: analyte type

characteristic: biospecimen repository

text: HMP

text: female

text: human metagenome

text: Control Set

characteristic: study name

text: Human metagenome sample from primary_o_Throat(THRO) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

text: primary_o_Supragingival plaque (SUPRA)

characteristic: biospecimen repository sample id

text: HMP

text: female

text: primary_o_Supragingival plaque (SUPRA)

characteristic: isolation source

text: human metagenome

characteristic: organism

text: Control Set

characteristic: study design

text: Human metagenome sample from primary_o_Supragingival plaque (SUPRA) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: primary_o_Subgingival plaque(SUB)

text: HMP

text: female

characteristic: host sex

text: primary_o_Subgingival plaque(SUB)

text: human metagenome

text: Control Set

characteristic: submitted sample id

text: Human metagenome sample from primary_o_Subgingival plaque(SUB) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: HMP

text: female

text: human metagenome

text: Control Set

characteristic: submitted subject id

text: Human metagenome sample from primary_s_L_Retroauricular crease (RAC_L) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: analyte type

characteristic: biospecimen repository

text: HMP

text: female

text: human metagenome

text: Control Set

characteristic: submitter handle

text: Human metagenome sample from primary_s_R_Retroauricular crease (RAC_R) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

text: primary_s_L_Antecubital fossa (ACF_L)

characteristic: biospecimen repository sample id

text: HMP

text: female

text: primary_s_L_Antecubital fossa (ACF_L)

characteristic: isolation source

text: human metagenome

characteristic: organism

text: Control Set

characteristic: study design

characteristic: study name

text: Human metagenome sample from primary_s_L_Antecubital fossa (ACF_L) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: primary_s_R_Antecubital fossa (ACF_R)

text: HMP

text: female

characteristic: host sex

text: primary_s_R_Antecubital fossa (ACF_R)

text: human metagenome

text: Control Set

text: Human metagenome sample from primary_s_R_Antecubital fossa (ACF_R) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)

characteristic: title


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: primary_s_Anterior nares (NASAL)

text: HMP

text: female

text: primary_s_Anterior nares (NASAL)

text: human metagenome

text: Control Set

characteristic: submitted sample id

text: Human metagenome sample from primary_s_Anterior nares (NASAL) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: primary_v_Vaginal introitus (INTRO)

characteristic: analyte type

characteristic: biospecimen repository

text: HMP

text: female

text: primary_v_Vaginal introitus (INTRO)

text: human metagenome

text: Control Set

characteristic: submitted subject id

text: Human metagenome sample from primary_v_Vaginal introitus (INTRO) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

text: primary_v_Mid vagina (MIDVAG)

characteristic: biospecimen repository sample id

text: HMP

text: female

text: primary_v_Mid vagina (MIDVAG)

characteristic: isolation source

text: human metagenome

characteristic: organism

text: Control Set

characteristic: study design

characteristic: submitter handle

text: Human metagenome sample from primary_v_Mid vagina (MIDVAG) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: primary_v_Posterior fornix (PFORN)

text: HMP

text: female

characteristic: host sex

text: primary_v_Posterior fornix (PFORN)

text: human metagenome

text: Control Set

characteristic: study name

text: Human metagenome sample from primary_v_Posterior fornix (PFORN) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: HMP

text: female

text: human metagenome

text: Control Set

text: Human metagenome sample from G_DNA_Stool of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)

characteristic: title


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: analyte type

characteristic: biospecimen repository

text: HMP

text: female

text: human metagenome

text: Control Set

text: HMP Core Microbiome Sampling Protocol A (HMP-A)

characteristic: submitted sample id


text: dbGaP

text: live

text: Generic

characteristic: biospecimen repository sample id

text: HMP

text: female

characteristic: isolation source

text: human metagenome

characteristic: organism

text: Control Set

characteristic: study design

characteristic: submitted subject id

text: Human metagenome sample from G_DNA_Saliva of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: G_DNA_Tongue dorsum

text: HMP

text: female

characteristic: host sex

text: G_DNA_Tongue dorsum

text: human metagenome

text: Control Set

characteristic: submitter handle

text: Human metagenome sample from G_DNA_Tongue dorsum of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: G_DNA_Hard palate

text: HMP

text: female

text: G_DNA_Hard palate

text: human metagenome

text: Control Set

characteristic: study name

text: Human metagenome sample from G_DNA_Hard palate of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: G_DNA_Buccal mucosa

characteristic: analyte type

characteristic: biospecimen repository

text: HMP

text: female

text: G_DNA_Buccal mucosa

text: human metagenome

text: Control Set

text: Human metagenome sample from G_DNA_Buccal mucosa of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)

characteristic: title


text: dbGaP

text: live

text: Generic

text: G_DNA_Attached/Keratinized gingiva

characteristic: biospecimen repository sample id

text: HMP

text: female

text: G_DNA_Attached/Keratinized gingiva

characteristic: isolation source

text: human metagenome

characteristic: organism

text: Control Set

characteristic: study design

characteristic: submitted sample id

text: Human metagenome sample from G_DNA_Attached/Keratinized gingiva of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: G_DNA_Palatine Tonsils

text: HMP

text: female

characteristic: host sex

text: G_DNA_Palatine Tonsils

text: human metagenome

text: Control Set

characteristic: submitted subject id

text: Human metagenome sample from G_DNA_Palatine Tonsils of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: HMP

text: female

text: human metagenome

text: Control Set

characteristic: submitter handle

text: Human metagenome sample from G_DNA_Throat of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: G_DNA_Supragingival plaque

characteristic: analyte type

characteristic: biospecimen repository

text: HMP

text: female

text: G_DNA_Supragingival plaque

text: human metagenome

text: Control Set

characteristic: study name

text: Human metagenome sample from G_DNA_Supragingival plaque of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

text: G_DNA_Subgingival plaque

characteristic: biospecimen repository sample id

text: HMP

text: female

text: G_DNA_Subgingival plaque

characteristic: isolation source

text: human metagenome

characteristic: organism

text: Control Set

characteristic: study design

text: Human metagenome sample from G_DNA_Subgingival plaque of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: G_DNA_L_Retroauricular crease

text: HMP

text: female

characteristic: host sex

text: G_DNA_L_Retroauricular crease

text: human metagenome

text: Control Set

characteristic: submitted sample id

text: Human metagenome sample from G_DNA_L_Retroauricular crease of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: G_DNA_R_Retroauricular crease

text: HMP

text: female

text: G_DNA_R_Retroauricular crease

text: human metagenome

text: Control Set

characteristic: submitted subject id

text: Human metagenome sample from G_DNA_R_Retroauricular crease of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: G_DNA_L_Antecubital fossa

characteristic: analyte type

characteristic: biospecimen repository

text: HMP

text: female

text: G_DNA_L_Antecubital fossa

text: human metagenome

text: Control Set

characteristic: submitter handle

text: Human metagenome sample from G_DNA_L_Antecubital fossa of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

text: G_DNA_R_Antecubital fossa

characteristic: biospecimen repository sample id

text: HMP

text: female

text: G_DNA_R_Antecubital fossa

characteristic: isolation source

text: human metagenome

characteristic: organism

text: Control Set

characteristic: study design

characteristic: study name

text: Human metagenome sample from G_DNA_R_Antecubital fossa of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: G_DNA_Anterior nares

text: HMP

text: female

characteristic: host sex

text: G_DNA_Anterior nares

text: human metagenome

text: Control Set

text: Human metagenome sample from G_DNA_Anterior nares of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)

characteristic: title


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: G_DNA_Vaginal introitus

text: HMP

text: female

text: G_DNA_Vaginal introitus

text: human metagenome

text: Control Set

characteristic: submitted sample id

text: Human metagenome sample from G_DNA_Vaginal introitus of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: G_DNA_Mid vagina

characteristic: analyte type

characteristic: biospecimen repository

text: HMP

text: female

text: G_DNA_Mid vagina

text: human metagenome

text: Control Set

characteristic: submitted subject id

text: Human metagenome sample from G_DNA_Mid vagina of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

text: G_DNA_Posterior fornix

characteristic: biospecimen repository sample id

text: HMP

text: female

text: G_DNA_Posterior fornix

characteristic: isolation source

text: human metagenome

characteristic: organism

text: Control Set

characteristic: study design

characteristic: submitter handle

text: Human metagenome sample from G_DNA_Posterior fornix of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: HMP

text: female

characteristic: host sex

text: human metagenome

text: Control Set

characteristic: study name

text: Human metagenome sample from G_DNA_Stool of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: HMP

text: female

text: human metagenome

text: Control Set

text: HMP Core Microbiome Sampling Protocol A (HMP-A)

characteristic: title


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: analyte type

characteristic: biospecimen repository

text: HMP

text: female

text: human metagenome

text: Control Set

characteristic: submitted sample id

text: Human metagenome sample from G_DNA_Saliva of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

text: G_DNA_Tongue dorsum

characteristic: biospecimen repository sample id

text: HMP

text: female

text: G_DNA_Tongue dorsum

characteristic: isolation source

text: human metagenome

characteristic: organism

text: Control Set

characteristic: study design

characteristic: submitted subject id

text: Human metagenome sample from G_DNA_Tongue dorsum of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: G_DNA_Hard palate

text: HMP

text: female

characteristic: host sex

text: G_DNA_Hard palate

text: human metagenome

text: Control Set

characteristic: submitter handle

text: Human metagenome sample from G_DNA_Hard palate of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: G_DNA_Buccal mucosa

text: HMP

text: female

text: G_DNA_Buccal mucosa

text: human metagenome

text: Control Set

characteristic: study name

text: Human metagenome sample from G_DNA_Buccal mucosa of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: G_DNA_Attached/Keratinized gingiva

characteristic: analyte type

characteristic: biospecimen repository

text: HMP

text: female

text: G_DNA_Attached/Keratinized gingiva

text: human metagenome

text: Control Set

text: Human metagenome sample from G_DNA_Attached/Keratinized gingiva of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)

characteristic: title


text: dbGaP

text: live

text: Generic

text: G_DNA_Palatine Tonsils

characteristic: biospecimen repository sample id

text: HMP

text: female

text: G_DNA_Palatine Tonsils

characteristic: isolation source

text: human metagenome

characteristic: organism

text: Control Set

characteristic: study design

characteristic: submitted sample id

text: Human metagenome sample from G_DNA_Palatine Tonsils of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: HMP

text: female

characteristic: host sex

text: human metagenome

text: Control Set

characteristic: submitted subject id

text: Human metagenome sample from G_DNA_Throat of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: G_DNA_Supragingival plaque

text: HMP

text: female

text: G_DNA_Supragingival plaque

text: human metagenome

text: Control Set

characteristic: submitter handle

text: Human metagenome sample from G_DNA_Supragingival plaque of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: G_DNA_Subgingival plaque

characteristic: analyte type

characteristic: biospecimen repository

text: HMP

text: female

text: G_DNA_Subgingival plaque

text: human metagenome

text: Control Set

characteristic: study name

text: Human metagenome sample from G_DNA_Subgingival plaque of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

text: G_DNA_L_Retroauricular crease

characteristic: biospecimen repository sample id

text: HMP

text: female

text: G_DNA_L_Retroauricular crease

characteristic: isolation source

text: human metagenome

characteristic: organism

text: Control Set

characteristic: study design

text: Human metagenome sample from G_DNA_L_Retroauricular crease of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: G_DNA_R_Retroauricular crease

text: HMP

text: female

characteristic: host sex

text: G_DNA_R_Retroauricular crease

text: human metagenome

text: Control Set

characteristic: submitted sample id

text: Human metagenome sample from G_DNA_R_Retroauricular crease of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: G_DNA_L_Antecubital fossa

text: HMP

text: female

text: G_DNA_L_Antecubital fossa

text: human metagenome

text: Control Set

characteristic: submitted subject id

text: Human metagenome sample from G_DNA_L_Antecubital fossa of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: G_DNA_R_Antecubital fossa

characteristic: analyte type

characteristic: biospecimen repository

text: HMP

text: female

text: G_DNA_R_Antecubital fossa

text: human metagenome

text: Control Set

characteristic: submitter handle

text: Human metagenome sample from G_DNA_R_Antecubital fossa of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

text: G_DNA_Anterior nares

characteristic: biospecimen repository sample id

text: HMP

text: female

text: G_DNA_Anterior nares

characteristic: isolation source

text: human metagenome

characteristic: organism

text: Control Set

characteristic: study design

characteristic: study name

text: Human metagenome sample from G_DNA_Anterior nares of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: G_DNA_Vaginal introitus

text: HMP

text: female

characteristic: host sex

text: G_DNA_Vaginal introitus

text: human metagenome

text: Control Set

text: Human metagenome sample from G_DNA_Vaginal introitus of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)

characteristic: title


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: G_DNA_Mid vagina

text: HMP

text: female

text: G_DNA_Mid vagina

text: human metagenome

text: Control Set

characteristic: submitted sample id

text: Human metagenome sample from G_DNA_Mid vagina of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: G_DNA_Posterior fornix

characteristic: analyte type

characteristic: biospecimen repository

text: HMP

text: female

text: G_DNA_Posterior fornix

text: human metagenome

text: Control Set

characteristic: submitted subject id

text: Human metagenome sample from G_DNA_Posterior fornix of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

characteristic: biospecimen repository sample id

text: HMP

text: female

characteristic: isolation source

text: human metagenome

characteristic: organism

text: Control Set

characteristic: study design

characteristic: submitter handle

text: Human metagenome sample from G_DNA_Stool of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: HMP

text: female

characteristic: host sex

text: human metagenome

text: Control Set

text: HMP Core Microbiome Sampling Protocol A (HMP-A)

characteristic: study name


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: HMP

text: female

text: human metagenome

text: Control Set

text: Human metagenome sample from G_DNA_Saliva of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)

characteristic: title


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: G_DNA_Tongue dorsum

characteristic: analyte type

characteristic: biospecimen repository

text: HMP

text: female

text: G_DNA_Tongue dorsum

text: human metagenome

text: Control Set

characteristic: submitted sample id

text: Human metagenome sample from G_DNA_Tongue dorsum of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

text: G_DNA_Hard palate

characteristic: biospecimen repository sample id

text: HMP

text: female

text: G_DNA_Hard palate

characteristic: isolation source

text: human metagenome

characteristic: organism

text: Control Set

characteristic: study design

characteristic: submitted subject id

text: Human metagenome sample from G_DNA_Hard palate of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: G_DNA_Buccal mucosa

text: HMP

text: female

characteristic: host sex

text: G_DNA_Buccal mucosa

text: human metagenome

text: Control Set

characteristic: submitter handle

text: Human metagenome sample from G_DNA_Buccal mucosa of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: G_DNA_Attached/Keratinized gingiva

text: HMP

text: female

text: G_DNA_Attached/Keratinized gingiva

text: human metagenome

text: Control Set

characteristic: study name

text: Human metagenome sample from G_DNA_Attached/Keratinized gingiva of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: G_DNA_Palatine Tonsils

characteristic: analyte type

characteristic: biospecimen repository

text: HMP

text: female

text: G_DNA_Palatine Tonsils

text: human metagenome

text: Control Set

text: Human metagenome sample from G_DNA_Palatine Tonsils of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)

characteristic: title


text: dbGaP

text: live

text: Generic

characteristic: biospecimen repository sample id

text: HMP

text: female

characteristic: isolation source

text: human metagenome

characteristic: organism

text: Control Set

characteristic: study design

characteristic: submitted sample id

text: Human metagenome sample from G_DNA_Throat of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: G_DNA_Supragingival plaque

text: HMP

text: female

characteristic: host sex

text: G_DNA_Supragingival plaque

text: human metagenome

text: Control Set

characteristic: submitted subject id

text: Human metagenome sample from G_DNA_Supragingival plaque of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: G_DNA_Subgingival plaque

text: HMP

text: female

text: G_DNA_Subgingival plaque

text: human metagenome

text: Control Set

characteristic: submitter handle

text: Human metagenome sample from G_DNA_Subgingival plaque of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: G_DNA_L_Retroauricular crease

characteristic: analyte type

characteristic: biospecimen repository

text: HMP

text: female

text: G_DNA_L_Retroauricular crease

text: human metagenome

text: Control Set

characteristic: study name

text: Human metagenome sample from G_DNA_L_Retroauricular crease of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

text: G_DNA_R_Retroauricular crease

characteristic: biospecimen repository sample id

text: HMP

text: female

text: G_DNA_R_Retroauricular crease

characteristic: isolation source

text: human metagenome

characteristic: organism

text: Control Set

characteristic: study design

text: Human metagenome sample from G_DNA_R_Retroauricular crease of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: G_DNA_L_Antecubital fossa

text: HMP

text: female

characteristic: host sex

text: G_DNA_L_Antecubital fossa

text: human metagenome

text: Control Set

characteristic: submitted sample id

text: Human metagenome sample from G_DNA_L_Antecubital fossa of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: G_DNA_R_Antecubital fossa

text: HMP

text: female

text: G_DNA_R_Antecubital fossa

text: human metagenome

text: Control Set

characteristic: submitted subject id

text: Human metagenome sample from G_DNA_R_Antecubital fossa of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: G_DNA_Anterior nares

characteristic: analyte type

characteristic: biospecimen repository

text: HMP

text: female

text: G_DNA_Anterior nares

text: human metagenome

text: Control Set

characteristic: submitter handle

text: Human metagenome sample from G_DNA_Anterior nares of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

text: G_DNA_Vaginal introitus

characteristic: biospecimen repository sample id

text: HMP

text: female

text: G_DNA_Vaginal introitus

characteristic: isolation source

text: human metagenome

characteristic: organism

text: Control Set

characteristic: study design

characteristic: study name

text: Human metagenome sample from G_DNA_Vaginal introitus of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: G_DNA_Mid vagina

text: HMP

text: female

characteristic: host sex

text: G_DNA_Mid vagina

text: human metagenome

text: Control Set

text: Human metagenome sample from G_DNA_Mid vagina of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)

characteristic: title


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: G_DNA_Posterior fornix

text: HMP

text: female

text: G_DNA_Posterior fornix

text: human metagenome

text: Control Set

characteristic: submitted sample id

text: Human metagenome sample from G_DNA_Posterior fornix of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: G_DNA_Posterior fornix

characteristic: analyte type

characteristic: biospecimen repository

text: HMP

text: female

text: G_DNA_Posterior fornix

text: human metagenome

text: Control Set

text: HMP Core Microbiome Sampling Protocol A (HMP-A)

characteristic: submitted subject id


text: dbGaP

text: live

text: Generic

characteristic: biospecimen repository sample id

text: HMP

text: female

characteristic: isolation source

text: human metagenome

characteristic: organism

text: Control Set

characteristic: study design

characteristic: submitter handle

text: Human metagenome sample from primary_g_Stool of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: primary_o_Saliva (SAL)

text: HMP

text: female

characteristic: host sex

text: primary_o_Saliva (SAL)

text: human metagenome

text: Control Set

characteristic: study name

text: Human metagenome sample from primary_o_Saliva (SAL) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: primary_o_Tongue dorsum (TONG)

text: HMP

text: female

text: primary_o_Tongue dorsum (TONG)

text: human metagenome

text: Control Set

text: Human metagenome sample from primary_o_Tongue dorsum (TONG) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)

characteristic: title


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: primary_o_Hard palate (HPAL)

characteristic: analyte type

characteristic: biospecimen repository

text: HMP

text: female

text: primary_o_Hard palate (HPAL)

text: human metagenome

text: Control Set

characteristic: submitted sample id

text: Human metagenome sample from primary_o_Hard palate (HPAL) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

text: primary_o_Buccal mucosa (BUCC)

characteristic: biospecimen repository sample id

text: HMP

text: female

text: primary_o_Buccal mucosa (BUCC)

characteristic: isolation source

text: human metagenome

characteristic: organism

text: Control Set

characteristic: study design

characteristic: submitted subject id

text: Human metagenome sample from primary_o_Buccal mucosa (BUCC) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: HMP

text: female

characteristic: host sex

text: human metagenome

text: Control Set

characteristic: submitter handle

text: Human metagenome sample from primary_o_Attached/Keratinized gingiva (GING) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: primary_o_Palatine Tonsils(PTON)

text: HMP

text: female

text: primary_o_Palatine Tonsils(PTON)

text: human metagenome

text: Control Set

characteristic: study name

text: Human metagenome sample from primary_o_Palatine Tonsils(PTON) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: analyte type

characteristic: biospecimen repository

text: HMP

text: female

text: human metagenome

text: Control Set

text: Human metagenome sample from primary_o_Throat(THRO) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)

characteristic: title


text: dbGaP

text: live

text: Generic

text: primary_o_Supragingival plaque (SUPRA)

characteristic: biospecimen repository sample id

text: HMP

text: female

text: primary_o_Supragingival plaque (SUPRA)

characteristic: isolation source

text: human metagenome

characteristic: organism

text: Control Set

characteristic: study design

characteristic: submitted sample id

text: Human metagenome sample from primary_o_Supragingival plaque (SUPRA) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: primary_o_Subgingival plaque(SUB)

text: HMP

text: female

characteristic: host sex

text: primary_o_Subgingival plaque(SUB)

text: human metagenome

text: Control Set

characteristic: submitted subject id

text: Human metagenome sample from primary_o_Subgingival plaque(SUB) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: HMP

text: female

text: human metagenome

text: Control Set

characteristic: submitter handle

text: Human metagenome sample from primary_s_L_Retroauricular crease (RAC_L) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: analyte type

characteristic: biospecimen repository

text: HMP

text: female

text: human metagenome

text: Control Set

characteristic: study name

text: Human metagenome sample from primary_s_R_Retroauricular crease (RAC_R) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

text: primary_s_L_Antecubital fossa (ACF_L)

characteristic: biospecimen repository sample id

text: HMP

text: female

text: primary_s_L_Antecubital fossa (ACF_L)

characteristic: isolation source

text: human metagenome

characteristic: organism

text: Control Set

characteristic: study design

text: Human metagenome sample from primary_s_L_Antecubital fossa (ACF_L) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: primary_s_R_Antecubital fossa (ACF_R)

text: HMP

text: female

characteristic: host sex

text: primary_s_R_Antecubital fossa (ACF_R)

text: human metagenome

text: Control Set

characteristic: submitted sample id

text: Human metagenome sample from primary_s_R_Antecubital fossa (ACF_R) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: primary_s_Anterior nares (NASAL)

text: HMP

text: female

text: primary_s_Anterior nares (NASAL)

text: human metagenome

text: Control Set

characteristic: submitted subject id

text: Human metagenome sample from primary_s_Anterior nares (NASAL) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: primary_v_Vaginal introitus (INTRO)

characteristic: analyte type

characteristic: biospecimen repository

text: HMP

text: female

text: primary_v_Vaginal introitus (INTRO)

text: human metagenome

text: Control Set

characteristic: submitter handle

text: Human metagenome sample from primary_v_Vaginal introitus (INTRO) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

text: primary_v_Mid vagina (MIDVAG)

characteristic: biospecimen repository sample id

text: HMP

text: female

text: primary_v_Mid vagina (MIDVAG)

characteristic: isolation source

text: human metagenome

characteristic: organism

text: Control Set

characteristic: study design

characteristic: study name

text: Human metagenome sample from primary_v_Mid vagina (MIDVAG) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: primary_v_Posterior fornix (PFORN)

text: HMP

text: female

characteristic: host sex

text: primary_v_Posterior fornix (PFORN)

text: human metagenome

text: Control Set

text: Human metagenome sample from primary_v_Posterior fornix (PFORN) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)

characteristic: title


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: HMP

text: female

text: human metagenome

text: Control Set

characteristic: submitted sample id

text: Human metagenome sample from primary_g_Stool of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: analyte type

characteristic: biospecimen repository

text: HMP

text: female

text: human metagenome

text: Control Set

text: HMP Core Microbiome Sampling Protocol A (HMP-A)

characteristic: submitted subject id


text: dbGaP

text: live

text: Generic

text: primary_o_Saliva (SAL)

characteristic: biospecimen repository sample id

text: HMP

text: female

text: primary_o_Saliva (SAL)

characteristic: isolation source

text: human metagenome

characteristic: organism

text: Control Set

characteristic: study design

characteristic: submitter handle

text: Human metagenome sample from primary_o_Saliva (SAL) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: primary_o_Tongue dorsum (TONG)

text: HMP

text: female

characteristic: host sex

text: primary_o_Tongue dorsum (TONG)

text: human metagenome

text: Control Set

characteristic: study name

text: Human metagenome sample from primary_o_Tongue dorsum (TONG) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: primary_o_Hard palate (HPAL)

text: HMP

text: female

text: primary_o_Hard palate (HPAL)

text: human metagenome

text: Control Set

text: Human metagenome sample from primary_o_Hard palate (HPAL) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)

characteristic: title


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: primary_o_Buccal mucosa (BUCC)

characteristic: analyte type

characteristic: biospecimen repository

text: HMP

text: female

text: primary_o_Buccal mucosa (BUCC)

text: human metagenome

text: Control Set

characteristic: submitted sample id

text: Human metagenome sample from primary_o_Buccal mucosa (BUCC) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)


text: dbGaP

text: live

text: Generic

characteristic: biospecimen repository sample id

text: HMP

text: female

characteristic: isolation source

text: human metagenome

characteristic: organism

text: Control Set

characteristic: study design

characteristic: submitted subject id

text: Human metagenome sample from primary_o_Attached/Keratinized gingiva (GING) of a female participant in the dbGaP study HMP Core Microbiome Sampling Protocol A (HMP-A)