text: Broad Institute

text: live

text: Generic

text: Generic

text: Bacillus cereus VD200

text: Generic sample from Bacillus cereus VD200


status: PUBLIC

characteristic: External Id

text: Broad Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Generic

tag: attribute

characteristic: biosamplemodel

text: Bacillus cereus VDM022

characteristic: organism

characteristic: sample name

characteristic: strain

text: Generic sample from Bacillus cereus VDM022

characteristic: title


text: Broad Institute

text: live

text: Generic

text: Generic

text: Bacillus cereus VDM019

text: Generic sample from Bacillus cereus VDM019


text: Broad Institute

text: live

text: Generic

text: Generic

text: Bacillus cereus VDM034

text: Generic sample from Bacillus cereus VDM034


text: Broad Institute

text: live

text: Generic

text: Generic

text: Bacillus cereus VDM062

text: Generic sample from Bacillus cereus VDM062


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Phaeocystis globosa is by far the most well represented member of its genus in phytoplankton culture collections, and the physiology, ecology, life history, and life cycle of certain strains have been thoroughly investigated. This species also offers an opportunity to study differences in gene expression between colonies and solitary cells (both of which are typically found in P. globosa cultures). In addition, P. globosa host-virus systems are an excellent candidate for molecular investigations, particularly since JGI is currently sequencing a range of P. globosa viral genomes.

characteristic: description

text: Phaeocystis globosa

characteristic: sample number

text: Phaeocystis globosa


text: Harvard Medical School

text: live

text: Generic

text: Nanog-like

characteristic: binding site

text: Myc

characteristic: chip antibody

characteristic: developmental stage

text: Danio rerio

text: 3.5hpf zebrafish embryos

text: TU

text: embryos

characteristic: tissue


characteristic: External Id

text: Harvard Medical School

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Nanog-like

text: Myc

text: Danio rerio

text: 4.5hpf zebrafish embryos

text: TU

text: embryos


text: Harvard Medical School

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Myc

text: Danio rerio

text: 4.5hpf zebrafish embryos

text: TU

text: embryos


text: Harvard Medical School

text: live

text: Generic

characteristic: SRA accession

text: Nanog-like

text: WCE (none)

text: Danio rerio

characteristic: organism

text: 3.5hpf zebrafish embryos

text: TU

text: embryos


text: Harvard Medical School

text: live

text: Generic

text: Nanog-like

text: WCE (none)

text: Danio rerio

text: 4.5hpf zebrafish embryos

text: TU

characteristic: strain

text: embryos

characteristic: title


text: Harvard Medical School

text: live

text: Generic

text: WCE (none)

text: Danio rerio

text: 4.5hpf zebrafish embryos

text: TU

text: embryos


text: Laboratory of Gene Regulation, Ludwig Institute for Cancer Research

text: live

text: Generic

text: Mus musculus

text: Mouse E14.5 brain


text: live

text: Generic

text: Mus musculus

text: Mouse E14.5 heart


text: live

text: Generic

text: Mus musculus

text: Mouse E14.5 limb


text: live

text: Generic

text: Mus musculus

text: Mouse E14.5 liver


text: live

text: Generic

text: Mus musculus

text: mouse intestine

text: RenLab-RNA-Seq-intestine


text: live

text: Generic

text: Mus musculus

text: mouse olfactory

text: RenLab-RNA-Seq-olfactory


text: live

text: Generic

text: Mus musculus

text: mouse placenta

text: RenLab-RNA-Seq-placenta


text: live

text: Generic

text: Mus musculus

text: mouse testes

text: RenLab-RNA-Seq-testes


text: live

text: Generic

text: Mus musculus

text: mouse thymus

text: RenLab-RNA-Seq-thymus


text: Shilatifard, Stowers Institute for Medical Research

text: live

text: Generic

text: custom ELL, see Lin et al. 2010 (Mol. Cell)

characteristic: antibody

text: C57BL/6 (female) x 129/S (male)

characteristic: cell type

text: Mus musculus

text: passage 10-18

characteristic: passage

text: KH2 mES

text: mES ELL ChIP-Seq


text: live

text: Generic

text: input

text: C57BL/6 (female) x 129/S (male)

text: Mus musculus

text: passage 10-18

text: KH2 mES

text: mES input ChIP-Seq


text: live

text: Generic

text: C57BL/6 (female) x 129/S (male)

text: Mus musculus

text: passage 10-18

text: V6.5 mES

text: mES ELL RNAi RNA-Seq


text: live

text: Generic

text: C57BL/6 (female) x 129/S (male)

text: Mus musculus

text: passage 10-18

text: V6.5 mES

text: mES control RNAi RNA-Seq rep1


text: live

text: Generic

text: C57BL/6 (female) x 129/S (male)

text: Mus musculus

text: passage 10-18

text: V6.5 mES

text: mES control RNAi RNA-Seq rep2


text: Institute for Genome Sciences University of MD School of Medicine

text: live

text: Generic

text: Escherichia coli EC1738

text: Escherichia coli EC1738


text: The Scripps Research Institute

text: live

text: Generic

text: Mus musculus

text: Skewed primary Igκ repertoire and V-J joining in C57BL/6 mice: implications for recombination accessibility and receptor editing


text: Broad Institute

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: Bacillus cereus BAG2X1-1

characteristic: sample name

text: Generic sample from Bacillus cereus BAG2X1-1


characteristic: External Id

text: Broad Institute

text: live

text: Generic

text: Generic

text: Bacillus cereus BAG2X1-2

text: Generic sample from Bacillus cereus BAG2X1-2


text: Broad Institute

characteristic: INSDC center name

text: live

text: Generic

text: Generic

text: Bacillus cereus BAG3O-2

text: Generic sample from Bacillus cereus BAG3O-2


text: Broad Institute

characteristic: INSDC first public

text: live

text: Generic

text: Generic

text: Bacillus cereus BAG3X2-2

text: Generic sample from Bacillus cereus BAG3X2-2


text: Broad Institute

characteristic: INSDC last update

text: live

text: Generic

text: Generic

text: Bacillus cereus BAG4O-1

text: Generic sample from Bacillus cereus BAG4O-1


text: Broad Institute

characteristic: INSDC secondary accession

text: live

text: Generic

text: Generic

text: Bacillus cereus BAG4X12-1

text: Generic sample from Bacillus cereus BAG4X12-1


text: Broad Institute

text: live

characteristic: INSDC status

text: Generic

text: Generic

text: Bacillus cereus BAG4X2-1

text: Generic sample from Bacillus cereus BAG4X2-1


text: Broad Institute

text: live

text: Generic

characteristic: NCBI submission model

text: Generic

text: Bacillus cereus BAG5O-1

text: Generic sample from Bacillus cereus BAG5O-1


text: Broad Institute

text: live

text: Generic

characteristic: NCBI submission package

text: Generic

text: Bacillus cereus BAG5X1-1

text: Generic sample from Bacillus cereus BAG5X1-1


text: Broad Institute

text: live

text: Generic

characteristic: SRA accession

text: Generic

text: Bacillus cereus BAG5X12-1

text: Generic sample from Bacillus cereus BAG5X12-1


text: Broad Institute

text: live

text: Generic

text: Generic

text: Bacillus cereus BAG5X2-1

characteristic: organism

text: Generic sample from Bacillus cereus BAG5X2-1


text: Broad Institute

text: live

text: Generic

text: Generic

text: Bacillus cereus BAG6O-2

characteristic: strain

text: Generic sample from Bacillus cereus BAG6O-2


text: Broad Institute

text: live

text: Generic

text: Generic

text: Bacillus cereus BAG6X1-1

text: Generic sample from Bacillus cereus BAG6X1-1

characteristic: title


text: Broad Institute

text: live

text: Generic

text: Generic

text: Bacillus cereus BAG6X1-2

text: Generic sample from Bacillus cereus BAG6X1-2


text: Broad Institute

text: live

text: Generic

text: Generic

text: Bacillus cereus BMG1.7

text: Generic sample from Bacillus cereus BMG1.7


text: Broad Institute

text: live

text: Generic

text: Generic

text: Bacillus cereus BtB2-4

text: Generic sample from Bacillus cereus BtB2-4


text: Broad Institute

text: live

text: Generic

text: Generic

text: Bacillus cereus HuB1-1

text: Generic sample from Bacillus cereus HuB1-1


text: Broad Institute

text: live

text: Generic

text: Generic

text: Bacillus cereus HuB2-9

text: Generic sample from Bacillus cereus HuB2-9


text: Broad Institute

text: live

text: Generic

text: Generic

text: Bacillus cereus HuB4-4

text: Generic sample from Bacillus cereus HuB4-4


text: Broad Institute

text: live

text: Generic

text: Generic

text: Bacillus cereus MSX-D12

text: Generic sample from Bacillus cereus MSX-D12


text: Broad Institute

text: live

text: Generic

text: Generic

text: Bacillus cereus VD166

text: Generic sample from Bacillus cereus VD166


Culture Comparison Pre-train A

text: Texas A&M University - Soil and Aquatic Microbiology Laboratory

text: live

text: Generic

text: Mixed bacterial culture obtained from a non-sterile carboxylate platform batch fermentation of 90 wt% paper and 10 wt% yeast extract incubated at 55 *C for 28 days. The original inoculum for this fermentation was marine sediment collected from Galveston Island, TX, USA.

characteristic: description

text: uncultured bacterium

text: Culture Comparison Pre-train A


Culture Comparison Pre-train B

text: live

text: Generic

text: Mixed bacterial culture obtained from a non-sterile carboxylate platform batch fermentation of 90 wt% paper and 10 wt% yeast extract incubated at 55 *C for 28 days. The original inoculum for this fermentation was soil collected from a residential lawn in Bryan, TX, USA.

text: uncultured bacterium

text: Culture Comparison Pre-train B


Culture Comparison Pre-train C

text: live

text: Generic

text: Mixed bacterial culture obtained from a non-sterile carboxylate platform batch fermentation of 90 wt% paper and 10 wt% yeast extract incubated at 55 *C for 28 days. The original inoculum for this fermentation was sediment from a saltern located on San Salvador Island, Bahamas.

text: uncultured bacterium

text: Culture Comparison Pre-train C


Culture Comparison Pre-train D

text: live

text: Generic

text: Mixed bacterial culture obtained from a non-sterile carboxylate platform batch fermentation of 90 wt% paper and 10 wt% yeast extract incubated at 55 *C for 28 days. The original inoculum for this fermentation was a pure culture of Clostridium thermocellum (ATCC 27405).

text: uncultured bacterium

text: Culture Comparison Pre-train D


Culture Comparison Pre-train E

text: live

text: Generic

text: Mixed bacterial culture obtained from a non-sterile carboxylate platform batch fermentation of 90 wt% paper and 10 wt% yeast extract incubated at 55 *C for 28 days. The original inoculum for this fermentation was sediment collected from Green Sulfur Springs, Beitou, Taiwan.

text: uncultured bacterium

text: Culture Comparison Pre-train E


Culture Comparison Pre-train F

text: live

text: Generic

text: Mixed bacterial culture obtained from a non-sterile carboxylate platform batch fermentation of 90 wt% paper and 10 wt% yeast extract incubated at 55 *C for 28 days. The original inoculum for this fermentation was saline sediment collected from La Sal del Rey, located in the Lower Rio Grande Valley National Wildlife Refuge (LRGV), near Raymondville, TX, USA.

text: uncultured bacterium

text: Culture Comparison Pre-train F


Culture Comparison Post-train A

text: live

text: Generic

text: Mixed bacterial culture obtained from a non-sterile carboxylate platform batch fermentation of 90 wt% paper and 10 wt% yeast extract incubated at 55 *C for 5 months. The inoculum for this fermentation was obtained from sample Culture Comparison Pre-train A, which is also included in this study.

text: uncultured bacterium

text: Culture Comparison Post-train A


Culture Comparison Post-train B

text: live

text: Generic

text: Mixed bacterial culture obtained from a non-sterile carboxylate platform batch fermentation of 90 wt% paper and 10 wt% yeast extract incubated at 55 *C for 5 months. The inoculum for this fermentation was obtained from sample Culture Comparison Pre-train B, which is also included in this study.

text: uncultured bacterium

text: Culture Comparison Post-train B


Culture Comparison Post-train C

text: live

text: Generic

text: Mixed bacterial culture obtained from a non-sterile carboxylate platform batch fermentation of 90 wt% paper and 10 wt% yeast extract incubated at 55 *C for 5 months. The inoculum for this fermentation was obtained from sample Culture Comparison Pre-train C, which is also included in this study.

text: uncultured bacterium

text: Culture Comparison Post-train C


Culture Comparison Post-train D

text: live

text: Generic

text: Mixed bacterial culture obtained from a non-sterile carboxylate platform batch fermentation of 90 wt% paper and 10 wt% yeast extract incubated at 55 *C for 5 months. The inoculum for this fermentation was obtained from sample Culture Comparison Pre-train D, which is also included in this study.

text: uncultured bacterium

text: Culture Comparison Post-train D


Culture Comparison Post-train E

text: live

text: Generic

text: Mixed bacterial culture obtained from a non-sterile carboxylate platform batch fermentation of 90 wt% paper and 10 wt% yeast extract incubated at 55 *C for 5 months. The inoculum for this fermentation was obtained from sample Culture Comparison Pre-train E, which is also included in this study.

text: uncultured bacterium

text: Culture Comparison Post-train E


Culture Comparison Post-train F

text: live

text: Generic

text: uncultured bacterium

text: Culture Comparison Post-train F


0dpa ovule

text: College of life sciences, Peking University

text: live

text: Generic

text: Gossypium hirsutum

text: 0dpa ovule from Gossypium hirsute


3dpa ovule

text: live

text: Generic

text: Gossypium hirsutum

text: 3dpa ovule from Gossypium hirsute


Bd susp TW01

text: Department of Entomology

text: live

text: Generic

text: Bactrocera dorsalis

text: Discovery of and characterization of genes related to insecticide resistance in Bactrocera dorsalis by functional genomic analysis of a de novo assembled transcriptome


name: CHGCS:sponge:Holoxea sp.

text: Chinese National Human Genome Center at Shanghai

text: live

text: Generic

text: metagenome from Holoxea sp.

text: Holoxea

text: Unexpected diverse fungal symbionts in Holoxea sp. and Lamellomorpha sp., revealed by Illumina GAIIx pyrosequencing of sponge microbiome


text: Broad Institute

text: live

text: Generic

text: Generic

text: Bacillus cereus AND1407

text: Generic sample from Bacillus cereus AND1407


text: Yonsei Univeristy

text: live

text: Generic

text: uncultured bacterium

text: Bacterial communities of environmental samples after inoculating GM-bacteria (0 to 94 days)


name: CHGCS:sponge: Lamellomorpha sp.

text: live

text: Generic

text: 18S rRNA of Lamellomorpha sp. metagenome

text: Lamellomorpha

text: Unexpected diverse fungal symbionts revealed by deep sequencing of sponge microbiome


text: CSIR-IHBT

text: live

text: Generic

text: Picrorhiza kurrooa

text: De novo sequencing and characterization of Picrorhiza kurrooa transcriptome at different temperature regimes revealed intense transcriptome adjustment.


text: Medical Informatics, University of Münster

text: live

text: Generic

text: Immunoglobulin G

characteristic: antibody

characteristic: cell line

text: Homo sapiens

text: HL-60 cells

text: vehicle

characteristic: treatment


text: live

text: Generic

text: Homo sapiens

text: HL-60 cells

text: vehicle


text: live

text: Generic

text: Homo sapiens

text: HL-60 cells

text: all-trans-retinoic acid


text: live

text: Generic

text: Homo sapiens

text: HL-60 cells

text: tranycypromine


text: live

text: Generic

text: Homo sapiens

text: HL-60 cells

text: all-trans-retinoic acid and tranylcypromine


text: live

text: Generic

text: Immunoglobulin G

text: TEX

text: Homo sapiens

text: TEX cells

text: vehicle


text: live

text: Generic

text: TEX

text: Homo sapiens

text: TEX cells

text: vehicle


text: live

text: Generic

text: TEX

text: Homo sapiens

text: TEX cells

text: all-trans-retinoic acid


text: live

text: Generic

text: TEX

text: Homo sapiens

text: TEX cells

text: tranycypromine


text: live

text: Generic

text: TEX

text: Homo sapiens

text: TEX cells


text: Broad Institute

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: isolated from wild mammal

characteristic: isolation source

text: Bacillus cereus IS075

characteristic: sample name

text: Generic sample from Bacillus cereus IS075


characteristic: External Id

text: Broad Institute

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Generic

text: isolated from milk

text: Bacillus cereus str. Schrouff

text: Schrouff

text: Schrouff

text: Generic sample from Bacillus cereus str. Schrouff


text: Broad Institute

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Generic

text: isolated from pasta

text: Bacillus cereus TIAC219

text: Generic sample from Bacillus cereus TIAC219


text: Broad Institute

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Generic

text: isolated from soil

text: Bacillus cereus VD142

text: Generic sample from Bacillus cereus VD142


text: Broad Institute

text: live

text: Generic

text: Generic

characteristic: organism

characteristic: strain

text: Generic sample from Francisella philomiragia subsp. philomiragia ATCC 25015

characteristic: title


text: Broad Institute

text: live

text: Generic

text: Generic

text: unclassified sequences

text: Generic sample from unclassified sequences


text: Broad Institute

text: live

text: Generic

text: Generic

text: Female

characteristic: host sex

text: Anaerovorax sp. ORNL_6EZ5-Gt_3_Pl2-127

text: Generic sample from Anaerovorax sp. ORNL_6EZ5-Gt_3_Pl2-127


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVP-395

text: Generic sample from Plasmodium falciparum


text: Broad Institute

text: live

text: Generic

text: Generic

text: human gut metagenome

text: Generic sample from unclassified Bacteria (miscellaneous)


text: Temasek Life Sciences Laboratory

text: live

text: Generic

text: Drosophila melanogaster

text: Ovarian tissue

text: Ovaries

characteristic: tissue

text: kumo heterozygous


text: Temasek Life Sciences Laboratory

text: live

text: Generic

text: Drosophila melanogaster

text: Ovarian tissue

text: Ovaries

text: kumo mutant


PRJNA173489.S aureus_1

text: Broad Institute

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: Staphylococcus aureus

text: S aureus_1

text: Generic sample from Staphylococcus aureus


name: 449331.5087.Genomic DNA.MG1655 No chl LW1

text: Broad Institute

text: live

text: Generic

text: Generic

text: Escherichia coli str. K-12 substr. MG1655

text: MG1655 No chl LW1

characteristic: sample id

text: Genomic DNA

characteristic: sample type

characteristic: substrain

text: E. coli MG1655 Genomic DNA sample MG1655 No chl LW1


characteristic: External Id

text: Broad Institute

characteristic: INSDC center name

text: live

text: Generic

text: Generic

text: Plasmodium falciparum NF135/5.C10

text: Plasmodium falciparum NF135/5.C10

characteristic: sample name

text: Generic sample from Plasmodium falciparum NF135/5.C10


text: Christopher Mason Lab, Physiology and Biophysics, Weill Cornell Medical College

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Adult

characteristic: age

text: MeRIP-Seq

characteristic: library strategy

characteristic: merip antibody

text: Synaptic Systems (SYSY)

characteristic: merip antibody vendor

text: Mus musculus

text: RiboMinus RNA

characteristic: rna subtype

text: RNA IP against m6A

text: whole brain

text: C57BL/6 Brain_Sample 1 MeRIP - SYSY


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Adult

text: MeRIP-Seq

text: Mus musculus

characteristic: organism

text: RiboMinus RNA

text: no IP (input RNA)

text: whole brain

characteristic: strain

text: C57BL/6 Brain_Sample 1 Non-IP Control

characteristic: title


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: Adult

text: MeRIP-Seq

text: Mus musculus

text: RiboMinus RNA

text: no IP (input RNA)

characteristic: sample type

text: whole brain

text: C57BL/6 Brain_Sample 2_Non-IP Control


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Adult

text: MeRIP-Seq

text: Synaptic Systems (SYSY)

text: Mus musculus

text: RiboMinus RNA

text: RNA IP against m6A

text: whole brain

text: C57BL/6 Brain_Sample 2_MeRIP - NEB


characteristic: INSDC secondary accession

text: live

text: Generic

text: Adult

characteristic: age

text: MeRIP-Seq

text: Synaptic Systems (SYSY)

text: Mus musculus

text: RiboMinus RNA

text: RNA IP against m6A

text: whole brain

text: C57BL/6 Brain_Sample 2_MeRIP - SYSY


text: Molecular, Cell and Developmental Biology, University of California, Los Angeles

text: live

text: Generic

text: Asgrow A3237

characteristic: cultivar

text: Glycine max

text: Laser captured seed coat parenchyma compartment from early maturation stage seed

text: Early Maturation-stage Seed Coat Parenchyma compartment


text: live

text: Generic

text: Asgrow A3237

text: Glycine max

text: Soybean seeds containing early maturation stage embryos

text: Early Maturation Stage Whole Seed


text: live

text: Generic

text: Williams 82

text: Glycine max

text: Soybean seeds containing globular (GLOB) stage embryos

text: Globular stage whole seed


text: live

text: Generic

text: Williams 82

text: Glycine max

text: Soybean seeds containing early maturation (EM) stage embryos

text: Early-maturation stage whole seed


text: live

text: Generic

text: Williams 82

text: Glycine max

text: Soybean seeds containing late-maturation (AA1) stage embryos

text: Late-maturation stage whole seed biological replicate 1


text: live

text: Generic

text: Williams 82

text: Glycine max

text: Dry soybean seeds

text: Dry seed Biological replicate 1


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

characteristic: cell type

text: Homo sapiens

characteristic: passages

characteristic: patient

text: Pterygium

text: Control #1

text: Control

characteristic: treatment


text: Angiogenesis, Oncology Area, CIBIR

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Doxy 50 #1

text: Doxy 50


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

characteristic: SRA accession

text: Pterygia cells

text: Homo sapiens

characteristic: organism

text: Pterygium

text: Doxy 200 #1

text: Doxy 200


characteristic: External Id

text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Doxy 500 #1

characteristic: title

text: Doxy 500


text: Angiogenesis, Oncology Area, CIBIR

characteristic: INSDC center name

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Control #2

text: Control


text: Angiogenesis, Oncology Area, CIBIR

characteristic: INSDC first public

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Doxy 50 #2

text: Doxy 50


text: Angiogenesis, Oncology Area, CIBIR

characteristic: INSDC last update

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Doxy 200 #2

text: Doxy 200


text: Angiogenesis, Oncology Area, CIBIR

characteristic: INSDC secondary accession

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Doxy 500 #2

text: Doxy 500


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Control #3

text: Control


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Doxy 50 #3

text: Doxy 50


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Doxy 200 #3

text: Doxy 200


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Doxy 500 #3

text: Doxy 500


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Control #4

text: Control


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Doxy 50 #4

text: Doxy 50


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Doxy 200 #4

text: Doxy 200


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Doxy 500 #4

text: Doxy 500


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Control #5

text: Control


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Doxy 50 #5

text: Doxy 50


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Doxy 200 #5

text: Doxy 200


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Doxy 500 #5

text: Doxy 500


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Control #6

text: Control


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Doxy 50 #6

text: Doxy 50


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Doxy 200 #6

text: Doxy 200


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Doxy 500 #6

text: Doxy 500


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Control #7

text: Control


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Doxy 50 #7

text: Doxy 50


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Doxy 200 #7

text: Doxy 200


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Doxy 500 #7

text: Doxy 500


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Control #8

text: Control


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Doxy 50 #8

text: Doxy 50


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Doxy 200 #8

text: Doxy 200


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Doxy 500 #8

text: Doxy 500


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Control #9

text: Control


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Doxy 50 #9

text: Doxy 50


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Doxy 200 #9

text: Doxy 200


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Doxy 500 #9

text: Doxy 500


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Control #10

text: Control


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Doxy 50 #10

text: Doxy 50


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Doxy 200 #10

text: Doxy 200


text: Angiogenesis, Oncology Area, CIBIR

text: live

text: Generic

text: Pterygia cells

text: Homo sapiens

text: Pterygium

text: Doxy 500 #10

text: Doxy 500


text: Ronald Evans, Gene Expression Lab, Salk Institute

text: live

text: Generic

text: primary bone marrow-derived macrophages

characteristic: chip antibody

text: Mus musculus

text: primary bone marrow-derived macrophages

characteristic: strain

text: GRIP1-ChIP + LPS

text: LPS-stimulated macrophages


text: live

text: Generic

text: primary bone marrow-derived macrophages

characteristic: cell type

text: Mus musculus

text: primary bone marrow-derived macrophages

text: GRIP1-ChIP + 1uM Dex + LPS replicate

text: Dexamethasone treated, LPS-stimulated macrophages


text: Sun Yat-sen university

text: live

text: Generic

text: Adipose Derived vascular stem cell

text: Sus scrofa

characteristic: passages

text: vascular stem cell

text: dorsal longissimus dorsi

characteristic: tissue

text: IVSC_small RNA seq


text: Sun Yat-sen university

text: live

text: Generic

text: Adipose Derived vascular stem cell

text: Sus scrofa

text: vascular stem cell

text: dorsal longissimus dorsi

text: IVSC-MDI_small RNA seq


text: Sun Yat-sen university

text: live

text: Generic

text: Adipose Derived vascular stem cell

text: Sus scrofa

text: vascular stem cell

text: subcutaneous fat

text: SVSC_small RNA seq


text: Sun Yat-sen university

text: live

text: Generic

text: Adipose Derived vascular stem cell

text: Sus scrofa

text: vascular stem cell

text: subcutaneous fat

text: SVSC-MDI_small RNA seq


text: Institute for Genomics and Systems Biology, University of Chicago

text: live

text: Generic

text: FAIRE

characteristic: antibody name

text: CNS

characteristic: developmental stage

text: White Lab

characteristic: manufacturer

text: Drosophila melanogaster

text: CNS

text: FAIRE_ChIPSeq_1 and 2


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: USP

text: White Lab

text: Drosophila melanogaster

text: USP, transgenic

text: USP_ChIPSeq_1 and 2


characteristic: External Id

text: live

text: Generic

characteristic: SRA accession

text: Drosophila melanogaster

characteristic: organism

text: USP, transgenic


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: White Lab

text: Drosophila melanogaster

text: E0-8_CG16778_ChIPSeq_1 and 2

characteristic: title


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Drosophila melanogaster


text: live

text: Generic

text: Hth

text: White Lab

text: Drosophila melanogaster

characteristic: strain

text: E0-8_Hth_ChIPSeq_1 and 2


text: live

text: Generic

text: TCF

text: White Lab

text: Drosophila melanogaster

text: TCF_ChIPSeq_1 and 2


text: live

text: Generic

text: White Lab

text: Drosophila melanogaster

text: Hnf4_ChIPSeq_1 and 2


text: live

text: Generic

text: SuHw

text: White Lab

text: Drosophila melanogaster

text: SuHw_ChIPSeq_1 and 2


text: live

text: Generic

text: Dfd

text: White Lab

text: Drosophila melanogaster

text: DFD, transgenic

text: Dfd_ChIPSeq_1 and 2


text: live

text: Generic

text: Drosophila melanogaster

text: DFD, transgenic


text: live

text: Generic

text: TCF

text: White Lab

text: Drosophila melanogaster

text: E16-24_TCF_ChIPSeq_1 and 2


text: live

text: Generic

text: Ttk

text: White Lab

text: Drosophila melanogaster

text: Ttk_ChIPSeq_1 and 2


text: live

text: Generic

text: Bcd

text: White Lab

text: Drosophila melanogaster

text: Bcd_ChIPSeq_1 and 2


text: live

text: Generic

text: Tango

text: White Lab

text: Drosophila melanogaster

text: Tango_ChIPSeq_1 and 2


text: live

text: Generic

text: Ttk

text: White Lab

text: Drosophila melanogaster

text: Kc167_Ttk_ChIPSeq_1 and 2


text: live

text: Generic

text: Yki

text: White Lab

text: Drosophila melanogaster

text: Yki_ChIPSeq_1 and 2


text: live

text: Generic

text: White Lab

text: Drosophila melanogaster

text: Zfh1_ChIPSeq_1 and 2


text: live

text: Generic

text: White Lab

text: Drosophila melanogaster

text: modmdg4_ChIPSeq_1 and 2


text: live

text: Generic

text: USP

text: White Lab

text: Drosophila melanogaster

text: USP, transgenic

text: WPP+12_USP_ChIPSeq_1 and 2


text: live

text: Generic

text: Drosophila melanogaster

text: USP, transgenic


text: live

text: Generic

text: WPP

text: White Lab

text: Drosophila melanogaster

text: WPP

text: H3K4me3_ChIPSeq_1 and 2


text: live

text: Generic

text: WPP

text: Drosophila melanogaster

text: WPP


text: live

text: Generic

text: SuHw

text: WPP

text: White Lab

text: Drosophila melanogaster

text: WPP

text: WPP_SuHw_ChIPSeq_1 and 2


text: live

text: Generic

text: Usp

text: White Lab

text: Drosophila melanogaster

text: USP, transgenic

text: Usp_ChIPSeq_1 and 2


text: live

text: Generic

text: Ubx

text: White Lab

text: Drosophila melanogaster


text: live

text: Generic

text: Fru

text: White Lab

text: Drosophila melanogaster

text: E0-8_Fru_ChIPSeq_1 and 2


text: live

text: Generic

text: Drosophila melanogaster


text: live

text: Generic

text: sc

text: White Lab

text: Drosophila melanogaster

text: E0-8_sc_ChIPSeq_1 and 2


text: live

text: Generic

text: sim

text: White Lab

text: Drosophila melanogaster

text: sim_ChIPSeq_1 and 2


text: Giraldez Lab, Genetics, Yale University

text: live

text: Generic

text: TUAB

characteristic: genetic background

text: MZdicer mutant

characteristic: genotype

text: Danio rerio

text: input mRNA

characteristic: sample type

text: Whole embryo, MZdicer

text: whole embryo

text: Input mRNA-Seq MZdicer 2hpf


text: Giraldez Lab, Genetics, Yale University

text: live

text: Generic

characteristic: developmental stage

text: TUAB

text: MZdicer mutant

text: Danio rerio

text: input mRNA

text: Whole embryo, MZdicer

text: whole embryo

characteristic: tissue

text: Input mRNA-Seq MZdicer 4hpf


text: Giraldez Lab, Genetics, Yale University

text: live

characteristic: INSDC status

text: Generic

text: TUAB

text: MZdicer mutant

text: Danio rerio

text: input mRNA

text: Whole embryo, MZdicer

text: whole embryo

text: Input mRNA-Seq MZdicer 4hpf-2


text: Giraldez Lab, Genetics, Yale University

text: live

text: Generic

characteristic: NCBI submission model

text: TUAB

text: MZdicer mutant

text: Danio rerio

text: input mRNA

text: Whole embryo, MZdicer

text: whole embryo

text: Input mRNA-Seq MZdicer 6hpf


text: Giraldez Lab, Genetics, Yale University

text: live

text: Generic

characteristic: NCBI submission package

text: TUAB

text: wild type

text: Danio rerio

text: input mRNA

text: Whole embryo, wild type

text: whole embryo

text: Input mRNA-Seq Wild type 2hpf


characteristic: External Id

text: Giraldez Lab, Genetics, Yale University

text: live

text: Generic

text: TUAB

text: wild type

text: Danio rerio

text: input mRNA

text: Whole embryo, wild type

text: whole embryo

text: Input mRNA-Seq Wild type 2hpf-2


text: Giraldez Lab, Genetics, Yale University

text: live

text: Generic

characteristic: SRA accession

text: TUAB

text: wild type

text: Danio rerio

text: input mRNA

text: Whole embryo, wild type

text: whole embryo

text: Input mRNA-Seq Wild type 4hpf


text: Giraldez Lab, Genetics, Yale University

text: live

text: Generic

text: TUAB

text: wild type

text: Danio rerio

characteristic: organism

text: input mRNA

text: Whole embryo, wild type

text: whole embryo

text: Input mRNA-Seq Wild type 4hpf-2


text: Giraldez Lab, Genetics, Yale University

characteristic: INSDC center name

text: live

text: Generic

text: TUAB

text: wild type

text: Danio rerio

text: input mRNA

text: Whole embryo, wild type

text: whole embryo

text: Input mRNA-Seq Wild type 6hpf


text: Giraldez Lab, Genetics, Yale University

characteristic: INSDC first public

text: live

text: Generic

text: TUAB

text: wild type

text: Danio rerio

text: input mRNA

text: Whole embryo, wild type

text: whole embryo

text: Input mRNA-Seq Wild type 6hpf-2


text: Giraldez Lab, Genetics, Yale University

text: live

text: Generic

text: MZdicer mutant

text: Danio rerio

text: ribosome protected fragments

text: Whole embryo, MZdicer

text: whole embryo

text: Ribosome protected fragments MZdicer 2hpf

characteristic: title


text: Giraldez Lab, Genetics, Yale University

characteristic: INSDC last update

text: live

text: Generic

text: MZdicer mutant

text: Danio rerio

text: ribosome protected fragments

text: Whole embryo, MZdicer

text: whole embryo

text: Ribosome protected fragments MZdicer 2hpf-2


text: Giraldez Lab, Genetics, Yale University

characteristic: INSDC secondary accession

text: live

text: Generic

text: MZdicer mutant

text: Danio rerio

text: ribosome protected fragments

text: Whole embryo, MZdicer

text: whole embryo

text: Ribosome protected fragments MZdicer 4hpf


text: Giraldez Lab, Genetics, Yale University

text: live

text: Generic

text: MZdicer mutant

text: Danio rerio

text: ribosome protected fragments

text: Whole embryo, MZdicer

text: whole embryo

text: Ribosome protected fragments MZdicer 4hpf-2


text: Giraldez Lab, Genetics, Yale University

text: live

text: Generic

text: MZdicer mutant

text: Danio rerio

text: ribosome protected fragments

text: Whole embryo, MZdicer

text: whole embryo

text: Ribosome protected fragments MZdicer 6hpf


text: Giraldez Lab, Genetics, Yale University

text: live

text: Generic

text: MZdicer mutant

text: Danio rerio

text: ribosome protected fragments

text: Whole embryo, MZdicer

text: whole embryo

text: Ribosome protected fragments MZdicer 6hpf-2


text: Giraldez Lab, Genetics, Yale University

text: live

text: Generic

text: wild type

text: Danio rerio

text: ribosome protected fragments

text: Whole embryo, wild type

text: whole embryo

text: Ribosome protected fragments Wild type 2hpf


text: Giraldez Lab, Genetics, Yale University

text: live

text: Generic

text: wild type

text: Danio rerio

text: ribosome protected fragments

text: Whole embryo, wild type

text: whole embryo

text: Ribosome protected fragments Wild type 2hpf-2


text: Giraldez Lab, Genetics, Yale University

text: live

text: Generic

text: wild type

text: Danio rerio

text: ribosome protected fragments

text: Whole embryo, wild type

text: whole embryo

text: Ribosome protected fragments Wild type 4hpf


text: Giraldez Lab, Genetics, Yale University

text: live

text: Generic

text: wild type

text: Danio rerio

text: ribosome protected fragments

text: Whole embryo, wild type

text: whole embryo

text: Ribosome protected fragments Wild type 4hpf-2


text: Giraldez Lab, Genetics, Yale University

text: live

text: Generic

text: wild type

text: Danio rerio

text: ribosome protected fragments

text: Whole embryo, wild type

text: whole embryo

text: Ribosome protected fragments Wild type 6hpf


text: Giraldez Lab, Genetics, Yale University

text: live

text: Generic

text: wild type

text: Danio rerio

text: ribosome protected fragments

text: Whole embryo, wild type

text: whole embryo

text: Ribosome protected fragments Wild type 6hpf-2


name: Human Idiopathic Pulmonary Fibrosis (IPF) Project

text: Tulane University

text: live

text: Generic

text: Homo sapiens

text: Detecting splicing variants from non-differentially expressed genes of human idiopathic pulmonary fibrosis


White River Rich Fen

text: University of Toronto Mississauga

text: live

text: Generic

text: White River Rich Fen is a rich sedge fen located in Northern Ontario. Latitude: 48.21N Longitude: 85.21W

characteristic: description

text: uncultured bacterium

text: White River Rich Fen


text: Iowa State University

text: live

text: Generic

text: Oesophagostomum dentatum


Vaccine vs Ctrl

text: Centro Superior de Investigacion en Salud Publica

text: live

text: Generic

text: Pool containing filtered sequences obtained from barcode 454 pyrosequencing of bacterial 16S rDNA after universal PCR amplification (bacteria). 17 samples were sequenced together, 12 of them came from subjects vaccinated against rotavirus (R1 through R12) and 5 from non-vaccinated individuals. Primers, barcodes, linkers and adaptors were removed from the sequences. From the resulting sequences, those with low quality, ambiguous characters or less than 200 characters were discarded.

text: Bacteria

text: Pool of vaccinated and nonvaccinated


text: University of Eastern Finland

text: live

text: Generic

text: IgG

characteristic: antibody

characteristic: cell line

text: Homo sapiens

text: MCF-7 cells

text: IgG control

text: EtOH

characteristic: treatment


text: University of Eastern Finland

text: live

text: Generic

text: ERa

text: Homo sapiens

text: MCF-7 cells

text: ER ChIP-seq

text: estradiol


text: Broad Institute

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: human gut metagenome

characteristic: sample name

text: Generic sample from unclassified Bacteria (miscellaneous)


PRJNA193498.Candida albicans P75010

text: Broad Institute

text: live

characteristic: INSDC status

text: Generic

text: Generic

text: Candida albicans P75010

text: Candida albicans P75010

characteristic: strain

text: Generic sample from Candida albicans P75010


text: Broad Institute

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Generic

text: Listeria monocytogenes 10403S

text: Generic sample from Listeria monocytogenes 10403S


PRJNA167910.Octodon degus_ID3935

characteristic: External Id

text: Broad Institute

text: live

text: Generic

characteristic: SRA accession

text: Generic

text: Octodon degus

text: Octodon degus_ID3935

text: Generic sample from Octodon degus


PRJNA167910.Golden Hamster female 1

text: Broad Institute

characteristic: INSDC center name

text: live

text: Generic

text: Generic

text: Mesocricetus auratus

characteristic: organism

text: Golden Hamster female 1

text: Generic sample from Mesocricetus auratus


text: Broad Institute

characteristic: INSDC first public

text: live

text: Generic

text: Generic

text: Corynebacterium sp. KPL2004

text: Generic sample from Corynebacterium sp. KPL2004

characteristic: title


text: Broad Institute

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Generic

text: Propionibacterium sp. KPL2005

text: Generic sample from Propionibacterium sp. KPL2005


name: 1132230704470 Staphylococcus aureus RN833-P8KB-A3NB-1-842 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Stapylococcus aureus RN833

characteristic: description

text: Staphylococcus warneri RN833

text: Generic sample from Staphylococcus warneri RN833


text: Duke University

text: live

text: Generic

text: LNCaP

characteristic: cell line

text: vehicle

characteristic: drug treatment

text: Homo sapiens

text: LNCaP prostate cancer cells


text: Duke University

text: live

text: Generic

text: LNCaP

text: Homo sapiens

text: LNCaP prostate cancer cells


text: Sam Gu, Molecular Biology and Biochemistry, Rutgers University

text: live

text: Generic

text: anti-H3K9me3 antibody

characteristic: chip antibody

text: Abcam

characteristic: chip antibody manufacturer

text: adult

characteristic: developmental stage

characteristic: genetic background

text: Caenorhabditis elegans

text: chrI: 7655024-7654481 (ego-1)

characteristic: rnai target

text: adult C. elegans

text: H3K9me3 nucleosome-IP from eri-1(mg366) mutant C. elegans that underwent ego-1 RNAi


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: anti-H3K9me3 antibody

text: Abcam

text: adult

text: Caenorhabditis elegans

text: chrI:6,907,993-6,909,159 (smg-1)

text: adult C. elegans

characteristic: strain

text: H3K9me3 nucleosome-IP from eri-1(mg366) mutant C. elegans that underwent smg-1 (center region) RNAi


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

characteristic: SRA accession

text: anti-H3K9me3 antibody

text: Abcam

text: embryo

text: Caenorhabditis elegans

characteristic: organism

text: chrX: 15728059-15728991 (lin-15B)

text: embryonic C. elegans

text: H3K9me3 nucleosome-IP from eri-1(mg366) mutant C. elegans that underwent lin-15B RNAi


characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: anti-H3K9me3 antibody

text: Abcam

text: embryo

text: Caenorhabditis elegans

text: chrII:7680827-7682011 (lir-1)

text: embryonic C. elegans

text: H3K9me3 nucleosome-IP from eri-1(mg366) mutant C. elegans that underwent lir-1 RNAi

characteristic: title


text: live

text: Generic

text: anti-H3K9me3 antibody

characteristic: chip antibody

text: Abcam

text: embryo

text: Caenorhabditis elegans

text: embryonic C. elegans

text: H3K9me3 nucleosome-IP from eri-1(mg366) mutant C. elegans as control for no RNAi


text: live

text: Generic

text: anti-H3K9me3 antibody

text: Abcam

characteristic: chip antibody manufacturer

text: adult

text: Caenorhabditis elegans

text: chrI:6,901,030-6,901,541 (smg-1)

text: adult C. elegans

text: wild type

text: H3K9me3 nucleosome-IP from wild type C. elegans that underwent smg-1 (3'-UTR) RNAi


text: live

text: Generic

text: anti-H3K9me3 antibody

text: Abcam

text: adult

characteristic: developmental stage

text: Caenorhabditis elegans

text: chrI:6,913,664-6,913,933 (smg-1)

text: adult C. elegans

text: wild type

text: H3K9me3 nucleosome-IP from wild type C. elegans that underwent smg-1 (5' end) RNAi


text: live

text: Generic

text: anti-H3K9me3 antibody

text: Abcam

text: adult

characteristic: genetic background

text: Caenorhabditis elegans

text: chrI:6,907,993-6,909,159 (smg-1)

text: adult C. elegans

text: wild type

text: H3K9me3 nucleosome-IP from wild type C. elegans that underwent smg-1 (center region) RNAi


text: live

text: Generic

text: anti-H3K9me3 antibody

text: Abcam

text: adult

text: Caenorhabditis elegans

text: chrI:6,907,993-6,909,159 (smg-1)

characteristic: rnai target

text: adult C. elegans

text: H3K9me3 nucleosome-IP from nrde-2(gg091) mutant C. elegans that underwent smg-1 (center region) RNAi


text: live

characteristic: INSDC status

text: Generic

text: anti-H3K9me3 antibody

text: Abcam

text: adult

text: Caenorhabditis elegans

text: chrI:6,907,993-6,909,159 (smg-1)

text: adult C. elegans

text: rrf-3 (pk1426)

text: H3K9me3 nucleosome-IP from rrf-3 (pk1426) mutant C. elegans that underwent smg-1 (center region) RNAi


text: live

text: Generic

characteristic: NCBI submission model

text: anti-H3K9me3 antibody

text: Abcam

text: adult

text: Caenorhabditis elegans

text: chrI:6,907,993-6,909,159 (smg-1)

text: adult C. elegans

text: H3K9me3 nucleosome-IP from rde-1(ne300) mutant C. elegans that underwent smg-1 (center region) RNAi


text: live

text: Generic

characteristic: NCBI submission package

text: anti-H3K9me3 antibody

text: Abcam

text: adult

text: Caenorhabditis elegans

text: chrI:6,907,993-6,909,159 (smg-1)

text: adult C. elegans

text: MAGO (ppw-1(tm914), sago-1(tm1195), sago-2(tm894), F58G1.1(tm1019), C06A1.4(tm887), and M03D4.6(tm1144)

text: H3K9me3 nucleosome-IP from MAGO C. elegans that underwent smg-1 (center region) RNAi


text: live

text: Generic

text: adult

text: Caenorhabditis elegans

text: chrI:6,907,993-6,909,159 (smg-1)

text: adult C. elegans

text: wild type

characteristic: strain

text: small RNA sequencing from wild type C. elegans that underwent smg-1 (center region) RNAi


characteristic: External Id

text: live

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text: adult

text: Caenorhabditis elegans

text: chrI:6,907,993-6,909,159 (smg-1)

text: adult C. elegans

text: MAGO (ppw-1(tm914), sago-1(tm1195), sago-2(tm894), F58G1.1(tm1019), C06A1.4(tm887), and M03D4.6(tm1144) mutant

text: small RNA sequencing from MAGO C. elegans that underwent smg-1 (center region) RNAi


text: Sam Gu, Molecular Biology and Biochemistry, Rutgers University

characteristic: INSDC center name

text: live

text: Generic

text: adult

text: Caenorhabditis elegans

text: chrI:6,907,993-6,909,159 (smg-1)

text: adult C. elegans

text: small RNA sequencing from rde-1(ne300) mutant C. elegans that underwent smg-1 (center region) RNAi


text: live

text: Generic

characteristic: SRA accession

text: adult

text: Caenorhabditis elegans

text: chrI:6,907,993-6,909,159 (smg-1)

text: adult C. elegans

text: small RNA sequencing from nrde-2(gg091) mutant C. elegans that underwent smg-1 (center region) RNAi


text: live

text: Generic

text: anti-H3K9me3 antibody

text: Abcam

text: adult

text: Caenorhabditis elegans

characteristic: organism

text: chrI:6,907,993-6,909,159 (smg-1)

text: adult C. elegans

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text: H3K9me3 nucleosome-IP from wild type C. elegans from a multigenerational RNAi experiment, P0 generation


characteristic: INSDC first public

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text: Abcam

text: adult

characteristic: generation

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text: adult C. elegans

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text: H3K9me3 nucleosome-IP from wild type C. elegans from a multigenerational RNAi experiment, F1 generation


characteristic: INSDC last update

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text: Abcam

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text: adult C. elegans

text: wild type

text: H3K9me3 nucleosome-IP from wild type C. elegans from a multigenerational RNAi experiment, F2 generation


text: live

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text: anti-H3K9me3 antibody

characteristic: chip antibody

text: Abcam

text: adult

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text: chrI:6,907,993-6,909,159 (smg-1)

text: adult C. elegans

text: wild type

text: H3K9me3 nucleosome-IP from wild type C. elegans from a multigenerational RNAi experiment, F3 generation

characteristic: title


text: live

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text: Abcam

characteristic: chip antibody manufacturer

text: larval L4 stage C. elegans

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text: larval L4 stage C. elegans

text: wild type

text: H3K9me3 nucleosome-IP from wild type C. elegans from a time-course RNAi experiment, 24 hours


text: live

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characteristic: genetic background

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characteristic: rnai target

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text: H3K9me3 nucleosome-IP from wild type C. elegans from a time-course RNAi experiment, 4 hours


text: live

characteristic: INSDC status

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characteristic: NCBI submission model

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text: small RNA sequencing from wild type C. elegans from a multigenerational RNAi experiment, F1 generation


text: live

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characteristic: NCBI submission package

text: adult

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characteristic: External Id

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text: wild type

text: small RNA sequencing from wild type C. elegans from a multigenerational RNAi experiment, F3 generation


text: live

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text: Caenorhabditis elegans

characteristic: organism

text: chrI:6,907,993-6,909,159 (smg-1)

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text: small RNA sequencing from wild type C. elegans from a a time-course RNAi experiment, 24 hours


characteristic: INSDC first public

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text: Caenorhabditis elegans

text: chrI:6,907,993-6,909,159 (smg-1)

text: larval L4 stage C. elegans

text: wild type

text: small RNA sequencing from wild type C. elegans from a a time-course RNAi experiment, 4 hours


name: 1132219619104 Staphylococcus epidermidis VCU113-P8KB-A4NB-1-827 Sample

text: J. Craig Venter Institute

characteristic: INSDC last update

text: live

text: Generic

text: Total DNA isolated from Stapylococcus epidermidis VCU113

characteristic: description

text: Staphylococcus epidermidis VCU113

text: Generic sample from Staphylococcus epidermidis VCU113


name: 1132211447669 Staphylococcus aureus SAUREUS649MID8-BF-01-788 Sample

text: J. Craig Venter Institute

characteristic: INSDC secondary accession

text: live

text: Generic

text: Total DNA isolated from Stapylococcus aureus 649

text: Ostrya rehderiana

text: Generic sample from Ostrya rehderiana


name: 1132221119390 Staphylococcus aureus SAUREUS923MID9-BF-01-766 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Stapylococcus aureus 923

text: Staphylococcus aureus subsp. aureus 923

text: Generic sample from Staphylococcus aureus subsp. aureus 923

characteristic: title


text: Broad Institute ; Harvard University

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characteristic: average insert size

characteristic: cell line

text: immortalised chronic myelogenous leukemia (CML)

characteristic: cell type

text: Homo sapiens

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characteristic: sample type

text: K-562 cell line

text: K-562 std gel sized


text: Broad Institute ; Harvard University

text: live

characteristic: INSDC status

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text: Homo sapiens

text: K-562 truseq 10000ng

text: K-562 cell line

text: K-562 truseq 10000ng


text: Broad Institute ; Harvard University

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characteristic: NCBI submission model

text: Homo sapiens

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text: K-562 cell line

text: K-562 truseq 3000ng


text: Broad Institute ; Harvard University

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characteristic: NCBI submission package

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text: K-562 cell line

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text: Broad Institute ; Harvard University

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text: K-562 cell line

text: K-562 truseq 500ng


text: Broad Institute ; Harvard University

text: live

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text: Homo sapiens

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text: K-562 cell line

text: K-562 truseq 250ng


text: Broad Institute ; Harvard University

text: live

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text: Homo sapiens

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text: K-562 cell line

text: K-562 truseq 100ng


text: Broad Institute ; Harvard University

text: live

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text: Homo sapiens

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text: K-562 cell line

text: K-562 truseq 50ng


text: Broad Institute ; Harvard University

text: live

text: Generic

text: Homo sapiens

text: K-562 truseq 30ng

text: K-562 cell line

text: K-562 truseq 30ng


text: Department of Chemistry and Biochemistry, University of California Los Angeles

text: live

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text: short time course

characteristic: group

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characteristic: library type

characteristic: mean/std insert size

text: TAP

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text: Chlamydomonas reinhardtii

characteristic: sequencing cycles / read length

text: Chlamydomonas cultured cells

characteristic: strain

characteristic: time

text: Chlamydomonas reinhardtii 2137 - Nitrogen deficiency short time course - t=0

text: Nitrogen deficiency

characteristic: treatment


characteristic: External Id

characteristic: INSDC center name

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text: Chlamydomonas reinhardtii 2137 - Nitrogen deficiency short time course - t=0'

text: Nitrogen deficiency


text: live

characteristic: INSDC status

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characteristic: NCBI submission model

text: short time course

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text: Chlamydomonas reinhardtii

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text: Chlamydomonas reinhardtii 2137 - Nitrogen deficiency short time course - t=2m

characteristic: title

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text: live

text: Generic

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text: paired-end

characteristic: library type

text: TAP

text: Chlamydomonas reinhardtii

text: Chlamydomonas cultured cells

text: Chlamydomonas reinhardtii 2137 - Nitrogen deficiency short time course - t=4m

text: Nitrogen deficiency


text: live

text: Generic

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text: paired-end

characteristic: mean/std insert size

text: TAP

characteristic: medium

text: Chlamydomonas reinhardtii

characteristic: sequencing cycles / read length

text: Chlamydomonas cultured cells

text: Chlamydomonas reinhardtii 2137 - Nitrogen deficiency short time course - t=8m

text: Nitrogen deficiency


text: live

text: Generic

text: short time course

text: paired-end

text: TAP

text: Chlamydomonas reinhardtii

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characteristic: strain

characteristic: time

text: Chlamydomonas reinhardtii 2137 - Nitrogen deficiency short time course - t=12m

text: Nitrogen deficiency

characteristic: treatment


characteristic: External Id

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text: live

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text: Chlamydomonas reinhardtii

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text: Chlamydomonas reinhardtii 2137 - Nitrogen deficiency short time course - t=18m

text: Nitrogen deficiency


characteristic: INSDC last update

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text: Chlamydomonas reinhardtii

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text: Chlamydomonas reinhardtii 2137 - Nitrogen deficiency short time course - t=24m

text: Nitrogen deficiency


text: live

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text: paired-end

text: TAP

text: Chlamydomonas reinhardtii

characteristic: organism

text: Chlamydomonas cultured cells

text: Chlamydomonas reinhardtii 2137 - Nitrogen deficiency short time course - t=30m

text: Nitrogen deficiency


text: live

text: Generic

characteristic: NCBI submission package

text: short time course

characteristic: group

text: paired-end

text: TAP

text: Chlamydomonas reinhardtii

text: Chlamydomonas cultured cells

text: Chlamydomonas reinhardtii 2137 - Nitrogen deficiency short time course - t=45m

characteristic: title

text: Nitrogen deficiency


text: live

text: Generic

text: short time course

text: paired-end

characteristic: library type

characteristic: mean/std insert size

text: TAP

characteristic: medium

text: Chlamydomonas reinhardtii

text: Chlamydomonas cultured cells

text: Chlamydomonas reinhardtii 2137 - Nitrogen deficiency short time course - t=60m

text: Nitrogen deficiency


text: live

text: Generic

text: 1st long time course

text: paired-end

text: TAP

text: Chlamydomonas reinhardtii

characteristic: sequencing cycles / read length

text: Chlamydomonas cultured cells

characteristic: strain

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text: Chlamydomonas reinhardtii 2137 - Nitrogen deficiency first long time course - t=0

text: Nitrogen deficiency


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: 1st long time course

text: single-end

text: TAP

text: Chlamydomonas reinhardtii

text: Chlamydomonas cultured cells

text: Chlamydomonas reinhardtii 2137 - Nitrogen deficiency first long time course - t=0 (2)

text: Nitrogen deficiency

characteristic: treatment


characteristic: INSDC first public

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text: live

text: Generic

text: 1st long time course

text: paired-end

text: TAP

text: Chlamydomonas reinhardtii

text: Chlamydomonas cultured cells

text: Chlamydomonas reinhardtii 2137 - Nitrogen deficiency first long time course - t=30m

text: Nitrogen deficiency


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: 1st long time course

text: single-end

text: TAP

text: Chlamydomonas reinhardtii

text: Chlamydomonas cultured cells

text: Chlamydomonas reinhardtii 2137 - Nitrogen deficiency first long time course - t=30m (2)

text: Nitrogen deficiency


text: live

text: Generic

characteristic: NCBI submission package

text: 1st long time course

characteristic: group

text: paired-end

text: TAP

text: Chlamydomonas reinhardtii

characteristic: organism

text: Chlamydomonas cultured cells

text: Chlamydomonas reinhardtii 2137 - Nitrogen deficiency first long time course - t=4h

text: Nitrogen deficiency


text: Department of Chemistry and Biochemistry, University of California Los Angeles

text: live

text: Generic

text: 1st long time course

text: single-end

characteristic: library type

characteristic: mean/std insert size

text: TAP

text: Chlamydomonas reinhardtii

text: Chlamydomonas cultured cells

text: Chlamydomonas reinhardtii 2137 - Nitrogen deficiency first long time course - t=4h (2)

characteristic: title

text: Nitrogen deficiency


text: live

text: Generic

text: 1st long time course

text: paired-end

text: TAP

characteristic: medium

text: Chlamydomonas reinhardtii

characteristic: sequencing cycles / read length

text: Chlamydomonas cultured cells

characteristic: strain

text: Chlamydomonas reinhardtii 2137 - Nitrogen deficiency first long time course - t=8h

text: Nitrogen deficiency


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: 1st long time course

text: single-end

text: TAP

text: Chlamydomonas reinhardtii

text: Chlamydomonas cultured cells

characteristic: time

text: Chlamydomonas reinhardtii 2137 - Nitrogen deficiency first long time course - t=8h (2)

text: Nitrogen deficiency


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: 2nd long time course

text: paired-end

text: TAP

text: Chlamydomonas reinhardtii

text: Chlamydomonas cultured cells

text: Chlamydomonas reinhardtii 2137 - Nitrogen deficiency second long time course - t=0h

text: Nitrogen deficiency

characteristic: treatment


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: 2nd long time course

text: paired-end

text: TAP

text: Chlamydomonas reinhardtii

text: Chlamydomonas cultured cells

text: Chlamydomonas reinhardtii 2137 - Nitrogen deficiency second long time course - t=2h

text: Nitrogen deficiency


text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: 2nd long time course

characteristic: group

text: paired-end

text: TAP

text: Chlamydomonas reinhardtii

text: Chlamydomonas cultured cells

text: Chlamydomonas reinhardtii 2137 - Nitrogen deficiency second long time course - t=8h

text: Nitrogen deficiency


text: live

text: Generic

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text: paired-end

characteristic: library type

characteristic: mean/std insert size

text: TAP

text: Chlamydomonas reinhardtii

characteristic: organism

text: Chlamydomonas cultured cells

text: Chlamydomonas reinhardtii 2137 - Nitrogen deficiency second long time course - t=12h

text: Nitrogen deficiency


text: live

text: Generic

text: 2nd long time course

text: paired-end

text: TAP

characteristic: medium

text: Chlamydomonas reinhardtii

characteristic: sequencing cycles / read length

text: Chlamydomonas cultured cells

text: Chlamydomonas reinhardtii 2137 - Nitrogen deficiency second long time course - t=24h

characteristic: title

text: Nitrogen deficiency


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: 2nd long time course

text: paired-end

text: TAP

text: Chlamydomonas reinhardtii

text: Chlamydomonas cultured cells

characteristic: strain

text: Chlamydomonas reinhardtii 2137 - Nitrogen deficiency second long time course - t=48h

text: Nitrogen deficiency


text: Ecker lab, PBIO, Salk-Institute

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: age

text: grown on LS plate

characteristic: condition

text: Columbia

characteristic: ecotype

text: wild type plants

characteristic: genotype/variation

text: Arabidopsis thaliana

text: polyA RNA

characteristic: rna fraction

text: 2-week-old wild type seedlings

text: Wild-type replicate 1


text: Ecker lab, PBIO, Salk-Institute

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

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characteristic: NCBI submission model

characteristic: NCBI submission package

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text: grown on LS plate

text: Columbia

text: wild type plants

text: Arabidopsis thaliana

text: polyA RNA

text: 2-week-old wild type seedlings

text: Wild-type replicate 2


text: Ecker lab, PBIO, Salk-Institute

text: live

text: Generic

text: grown on LS plate

text: Columbia

text: wild type plants

text: Arabidopsis thaliana

characteristic: organism

text: polyA RNA

text: 2-week-old wild type seedlings

text: Wild-type replicate 3


text: Ecker lab, PBIO, Salk-Institute

text: live

text: Generic

text: grown on LS plate

text: Columbia

text: fry1-6 plants

text: Arabidopsis thaliana

text: polyA RNA

text: 2-week-old fry1-6 seedlings

text: fry1-6 replicate 1

characteristic: title


characteristic: External Id

text: Ecker lab, PBIO, Salk-Institute

text: live

text: Generic

text: grown on LS plate

text: Columbia

text: fry1-6 plants

text: Arabidopsis thaliana

text: polyA RNA

text: 2-week-old fry1-6 seedlings

text: fry1-6 replicate 2


text: Ecker lab, PBIO, Salk-Institute

characteristic: INSDC center name

text: live

text: Generic

text: grown on LS plate

text: Columbia

text: fry1-6 plants

text: Arabidopsis thaliana

text: polyA RNA

text: 2-week-old fry1-6 seedlings

text: fry1-6 replicate 3


text: Ecker lab, PBIO, Salk-Institute

text: live

text: Generic

text: grown on LS plate

text: Columbia

text: xrn3-3 plants

text: Arabidopsis thaliana

text: polyA RNA

text: 2-week-old xrn3-3 seedlings

text: xrn3-3 replicate 1


text: Ecker lab, PBIO, Salk-Institute

text: live

text: Generic

text: grown on LS plate

text: Columbia

text: xrn3-3 plants

text: Arabidopsis thaliana

text: polyA RNA

text: 2-week-old xrn3-3 seedlings

text: xrn3-3 replicate 2


text: Ecker lab, PBIO, Salk-Institute

text: live

text: Generic

text: grown on LS plate

text: Columbia

text: xrn2-1xrn4-6 plants

text: Arabidopsis thaliana

text: polyA RNA

text: 2-week-old xrn2-1xrn4-6 seedlings

text: xrn2-1xrn4-6 replicate 1


text: Ecker lab, PBIO, Salk-Institute

text: live

text: Generic

text: grown on LS plate

text: Columbia

text: xrn2-1xrn4-6 plants

text: Arabidopsis thaliana

text: polyA RNA

text: 2-week-old xrn2-1xrn4-6 seedlings

text: xrn2-1xrn4-6 replicate 2


text: Ecker lab, PBIO, Salk-Institute

text: live

text: Generic

text: grown on LS plate

text: Columbia

text: xrn3-3xrn4-6 plants

text: Arabidopsis thaliana

text: polyA RNA

text: 2-week-old xrn3-3xrn4-6 seedlings

text: xrn3-3xrn4-6 replicate 1


text: Ecker lab, PBIO, Salk-Institute

text: live

text: Generic

text: grown on LS plate

text: Columbia

text: xrn3-3xrn4-6 plants

text: Arabidopsis thaliana

text: polyA RNA

text: 2-week-old xrn3-3xrn4-6 seedlings

text: xrn3-3xrn4-6 replicate 2


text: Ecker lab, PBIO, Salk-Institute

text: live

text: Generic

text: grown on soil

text: Columbia

text: wild type plants

text: Arabidopsis thaliana

text: polyA RNA

text: 3-week-old wild type seedlings

text: Wild-type-3w replicate 1


text: Ecker lab, PBIO, Salk-Institute

text: live

text: Generic

text: grown on soil

text: Columbia

text: wild type plants

text: Arabidopsis thaliana

text: polyA RNA

text: 3-week-old wild type seedlings

text: Wild-type-3w replicate 2


text: Ecker lab, PBIO, Salk-Institute

text: live

text: Generic

text: grown on soil

text: Columbia

text: xrn2-1xrn3-3 plants

text: Arabidopsis thaliana

text: polyA RNA

text: 3-week-old xrn2-1xrn3-3 seedlings

text: xrn2-1xrn3-3 replicate 1


text: Ecker lab, PBIO, Salk-Institute

text: live

text: Generic

text: grown on soil

text: Columbia

text: xrn2-1xrn3-3 plants

text: Arabidopsis thaliana

text: polyA RNA

text: 3-week-old xrn2-1xrn3-3 seedlings

text: xrn2-1xrn3-3 replicate 2


text: College of Agronomy, Northwest A & F University

text: live

text: Generic

text: Total RNA was extracted by Trizol, then reverse transcription was conducted by A-MLV reverse transcriptase; then double strand cDNA was synthesized and digested by RsaI; cloned into pGEM-T EASY vector and transformed to E coli strain DH5alpha, sequencing were conducted by Sp6 or T7 primer at Sangon Biotech (Shanghai) Co., Ltd..

characteristic: description

text: 4-5 young leaves

characteristic: dev-stage

text: Triticum turgidum

text: wheat line S849

characteristic: strain

text: leaves

characteristic: tissue-type

text: SSH sequences in leaves of S849 after artificially infested with English grain aphid (Sitobion avenae F.)


text: Rob Mitra, Genetics, Washington University School of Medicine

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: cell line

text: Homo sapiens

text: Wild-type PB insertions Rep #1

text: Wild-type PB insertions Rep #1


text: live

text: Generic

text: Homo sapiens

text: Wild-type PB insertions Rep #2

text: Wild-type PB insertions Rep #2


text: live

text: Generic

text: Homo sapiens

text: Wild-type PB insertions Rep #3

text: Wild-type PB insertions Rep #3


text: live

text: Generic

text: Homo sapiens

text: SP1 PB insertions Rep #1

text: SP1 PB insertions Rep #1


text: live

text: Generic

text: Homo sapiens

text: SP1 PB insertions Rep #2

text: SP1 PB insertions Rep #2


text: live

text: Generic

characteristic: antibody

characteristic: antibody catalog number

characteristic: antibody lot number

text: Active Motif

characteristic: antibody vendor

text: Homo sapiens

text: SP1 ChIP-seq - HCT116

text: SP1 ChIP-seq - HCT116


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Homo sapiens

text: RNA-seq - HCT116

text: RNA-seq - HCT116


characteristic: External Id

text: Broad Institute

text: live

text: Generic

characteristic: SRA accession

text: Generic

characteristic: biosamplemodel

text: Latimeria menadoensis

characteristic: organism

characteristic: sample name

text: Generic sample from Latimeria menadoensis

characteristic: title


text: Broad Institute

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVW-152

characteristic: strain

text: Generic sample from Plasmodium falciparum


text: Broad Institute

characteristic: INSDC last update

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVL-435


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVY-366


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVQ-134


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVM-235


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVQ-142


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVS-435


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVM-125


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVO-435


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVY-367


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVS-015


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVQ-212


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVR-303


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVU-235


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVL-368


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVU-093


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVX-141


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVU-368


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVY-388


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVX-131


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVX-129


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVM-241


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVP-385


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVO-385


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVQ-435


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVO-305


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVO-235


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVP-110


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVO-110


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVO-241


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVQ-431


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVL-305


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVQ-258


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVO-321


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVQ-378


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVO-134


text: Broad Institute

text: live

text: Generic

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum XVO-212


text: Broad Institute

text: live

text: Generic

characteristic: bi gssr sample id

characteristic: bi gssr sample lsid

text: Genomic DNA

characteristic: bi gssr sample type

text: Generic

characteristic: cell line

text: Human herpesvirus 2 strain 186

text: Other

characteristic: sex

text: Cell Culture

characteristic: tissue source

text: HSV-2 HSV2_186 Genomic DNA sample 20698.0


text: Broad Institute

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Generic

text: Latimeria menadoensis


Keller Peninsula

characteristic: External Id

text: Federal University of Pampa

text: live

text: Generic

characteristic: SRA accession

text: Metagenomic sample

characteristic: description

text: soil metagenome

characteristic: organism

text: Antarctic microbiome


text: Institute for Genome Sciences University of MD School of Medicine

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Escherichia coli TW11039

text: Escherichia coli TW11039

characteristic: title


characteristic: INSDC last update

text: live

text: Generic

text: Escherichia coli TW10119

characteristic: strain

text: Escherichia coli TW10119


Ntera2 DNA

text: UC Davis

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: NTera 2

text: Extracted Ntera2 genomic DNA was fragmented with 5 restriction enzymes (EcoRI, HindIII, BsrGI, XbaI, SspI) and RNA:DNA hybrids enriched using the S9.6 monoclonal antibody or MBP-RnaseH1 mutant.

text: Homo sapiens

text: Ntera2 DNA


H2BK123Ub-Modified nucleosomes

text: Pennsylvania State University

text: live

text: Generic

text: Eucommia ulmoides

text: H2BK123Ub-Modified nucleosomes


text: University of Amsterdam

text: live

text: Generic

text: Tetranychus urticae Strain DeLier1 - 454 Transcriptome

text: Tetranychus urticae

text: Tetranychus urticae Strain DeLier1 454 Transcriptome


text: live

text: Generic

text: Escherichia coli TW09109

text: Escherichia coli TW09109


text: live

text: Generic

text: Escherichia coli EC4013

text: Escherichia coli EC4013


text: University of Amsterdam

text: live

text: Generic

text: Tetranychus urticae

text: Tetranychus urticae Strain Santpoort1 454/Transcriptome


text: University of Amsterdam

text: live

text: Generic

text: Tetranychus urticae

text: Tetranychus urticae Strain Houten1 454 Transcriptome


text: live

text: Generic

text: Escherichia coli EC4196

text: Escherichia coli EC4196


text: Plant Science and Technology College, Beijing University of Agriculture

text: live

text: Generic

text: Sweet Charlie

characteristic: cultivar

text: Fragaria x ananassa

text: fruits from 5 different development stages

text: young green fruitlets, big green fruits, white fruits, pink fruits and mature red fruits

characteristic: tissue

text: S4 miRNA


text: live

text: Generic

text: Escherichia coli EC4203

text: Escherichia coli EC4203


text: live

text: Generic

text: Escherichia coli EC4421

text: Escherichia coli EC4421


text: Neotoma bryanti

characteristic: Host Species

text: University of Utah

text: live

text: Generic

characteristic: animal number

text: Generic

text: 16S inventories from the foregut of a Bryant's woodrat (Neotoma bryanti) that is evolutionary naive to the plant defense compounds of creosote bush (Larrea tridentata), feeding on control diet.

text: Control

characteristic: diet

text: Naive

characteristic: evolutionary experience

text: gut metagenome

text: Animal 202 Neotoma bryanti fed control diet


text: Neotoma bryanti

text: University of Utah

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Generic

text: Creosote

text: Naive

text: gut metagenome

text: Animal 203 Neotoma bryanti fed creosote diet


characteristic: External Id

text: live

text: Generic

characteristic: SRA accession

text: Escherichia coli EC4436

characteristic: organism

text: Escherichia coli EC4436


text: University of Florida

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: air metagenome

text: Chad Sample 5

characteristic: title


text: University of Florida

characteristic: INSDC last update

text: live

text: Generic

text: air metagenome

text: Chad Sample 3


text: live

text: Generic

text: Escherichia coli EC4422

characteristic: strain

text: Escherichia coli EC4422


text: live

text: Generic

text: Escherichia coli EC4439

text: Escherichia coli EC4439


text: University of Utah

text: live

text: Generic

characteristic: description

text: gut metagenome

text: Animal 206 Neotoma bryanti fed control diet


text: Neotoma bryanti

characteristic: Host Species

text: University of Utah

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: 16S inventories from the foregut of a Bryant's woodrat (Neotoma bryanti) that is evolutionary naive to the plant defense compounds of creosote bush (Larrea tridentata), feeding on creosote diet.

text: Creosote

text: Naive

text: gut metagenome

text: Animal 209 Neotoma bryanti fed creosote diet


text: live

text: Generic

text: Escherichia coli TW07945

text: Escherichia coli TW07945


text: Department of Chemistry and Biochemistry, University of California Los Angeles

text: live

text: Generic

text: TAP

characteristic: medium

text: Chlamydomonas reinhardtii

text: Chlamydomonas cultured cells

characteristic: time

text: Hydrogen peroxide, t=0h after treatment

text: Hydrogen peroxide

characteristic: treatment


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: TAP

text: Chlamydomonas reinhardtii

text: Chlamydomonas cultured cells

text: Hydrogen peroxide, t=0.5h after treatment

text: Hydrogen peroxide


text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: TAP

text: Chlamydomonas reinhardtii

text: Chlamydomonas cultured cells

text: Hydrogen peroxide, t=1h after treatment

text: Hydrogen peroxide


characteristic: External Id

text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

characteristic: SRA accession

text: Locust Midgut 2 treatment 2 metatranscriptome

text: Schistocerca gregaria

characteristic: sample number

text: Generic sample from Schistocerca gregaria


text: Centro de BioInnovacion, Universidad de Antofagasta

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: unicellular

characteristic: cell type

text: microalgae chloroficeae cultivated under experimental conditions and exposed to different herbicide concentrations.

text: Muriellopsis sp. FS MR-2011

characteristic: organism

text: FS

text: subtracted libraries from microalgae exposed to herbicides


text: Guangdong Academy of Agricultural Sciences

characteristic: INSDC last update

text: live

text: Generic

text: Fortune Saltzman

characteristic: cultivar

text: cDNAs of cool-night temperature induced flower buds of Phalaenopsis hybrid cv. Fortune Saltzman subtracted with cDNAs of its tip leaves under normal temperature

characteristic: description

text: Phalaenopsis hybrid cultivar

text: Phalaenopsis hybrid cv. Fortune Saltzman flower bud SSH cDNA library

characteristic: title


text: live

text: Generic

text: Brother Sister

text: cDNAs of cool-night temperature induced flower buds of Phalaenopsis hybrid cv. Brother Sister subtracted with cDNAs of its tip leaves under normal temperature

text: Phalaenopsis hybrid cultivar

text: Phalaenopsis hybrid cv. Brother Sister flower bud SSH cDNA library


Sockeye SOLiD SBEARL08 1001 testes

text: University of Washington

text: live

text: Generic

text: Individual SBEARL08_1001 from Bear Lake, North Alaska Peninsula, Alaska. Transcriptome from testes.

text: Oncorhynchus nerka

text: Sockeye SOLiD SBEARL08 1001 testes


Sockeye SOLiD SLKUL08 1001 testes

text: University of Washington

text: live

text: Generic

text: Individual SLKUL08_1001 from Lake Kulik Beachs, Wood-Igushik drainage, Alaska. Transcriptome from testes.

text: Oncorhynchus nerka

text: Sockeye SOLiD SLKUL08 1001 testes


Sockeye SOLiD SLKUL08 1002 testes

text: University of Washington

text: live

text: Generic

text: Individual SLKUL08_1002 from Lake Kulik beaches, Wood-Igushik drainage, Alaska. Transcriptome from testes.

text: Oncorhynchus nerka

text: Sockeye SOLiD SLKUL08 1002 testes


Sockeye SOLiD SYAKOBH08 1002 testes

text: University of Washington

text: live

text: Generic

text: Individual SYAKOBH08_1002 from Yako Beach, Lake Aleknagik, Wood-Igushik drainage, Alaska. Transcriptome sequence from testes.

text: Oncorhynchus nerka

text: Sockeye SOLiD SYAKOBH08 1002 testes


Sockeye SOLiD SBEAR08 1002 testes

text: University of Washington

text: live

text: Generic

text: Individual SBEARL08_1002 from Bear Lake, North Alaska Peninsula, Alaska. Transcriptome sequence from testes.

text: Oncorhynchus nerka

text: Sockeye SOLiD SBEAR08 1002 testes


Sockeye SOLiD SMEND08 1001 testes

text: University of Washington

text: live

text: Generic

text: Individual SMEND08_1001 from Mendeltna Creek, Copper River drainage, Alaska. Transcriptome from testes.

text: Oncorhynchus nerka

text: Sockeye SOLiD SMEND08 1001 testes


Sockeye SOLiD SMEND08 1002 testes

text: University of Washington

text: live

text: Generic

text: Individual 1002, transcriptome from testes, individual collected at Mendeltna Creek, Copper River drainage, Alaska.

text: Oncorhynchus nerka

text: Sockeye SOLiD SMEND08 1002 testes


Sockeye SOLiD SLKUL08 1001 pooled

text: University of Washington

text: live

text: Generic

text: Individual 1001, transcriptome from pool of heart, liver, testes, and gill. Individual collected at Lake Kulik Beaches, Wood River, Wood-Igushik drainage, Alaska.

text: Oncorhynchus nerka

text: Sockeye SOLiD SLKUL08 1001 pooled


Sockeye SOLiD SLKUL08 1002 pooled

text: University of Washington

text: live

text: Generic

text: Individual 1002, transcriptome pooled from heart, liver, testes and gill, individual collected from Lake Kulik Beaches, Wood River, Wood-Igushik drainage, Alaska

text: Oncorhynchus nerka

text: Sockeye SOLiD SLKUL08 1002 pooled


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

characteristic: culture-collection

text: Trichoderma asperellum

text: Trichoderma asperellum CBS 433.97

text: CBS 433.97

characteristic: strain

text: Generic sample from Trichoderma asperellum CBS 433.97


characteristic: INSDC secondary accession

text: live

text: Generic

text: Zostera marina

text: Zostera marina

text: Generic sample from Zostera marina


text: live

characteristic: INSDC status

text: Generic

characteristic: atcc

text: USA: GA

characteristic: country

text: Pisolithus tinctorius Marx 270; isolated under Pinus elliotii in Georgia, USA

text: under Pinus elliotii

characteristic: isolation source

text: Pisolithus tinctorius Marx 270

text: Marx 270

text: Pisolithus tinctorius Marx 270


characteristic: External Id

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Pisolithus tinctorius Marx 270

text: Pisolithus tinctorius Marx 270

text: Marx 270

text: Generic sample from Pisolithus tinctorius


text: The Institute of Medicinal Plant Development

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Ganoderma lucidum strain CGMCC5.0026

text: Ganoderma lucidum G.260125-1

text: Ganoderma lucidum strain CGMCC5.0026


Dirofilaria immitis

text: Sichuan Agricultural University

characteristic: INSDC last update

text: live

text: Generic

text: Live adult heartworms were collected at necropsy of an adult dog with sudden death, obtained from a pet hospital in Ya’an, Sichuan, China. Phosphate-buffered saline (PBS; pH 7.4; 37℃) were used to clean the live worms, both males and females, for five times to remove contamination from the host. Then the worms were immediately frozen in liquid nitrogen and stored at -80℃ until use.

text: Dirofilaria immitis

characteristic: organism

text: Adult Dirofilaria immitis


text: Cell biology of Trees, The Research Institute of Forestry, The Chinese Academy of Forestry

text: live

text: Generic

text: 1.5 year-old

characteristic: age

text: Larix kaempferi

text: 1.5 year-old seedling

text: Mixed tissue (root,stem,and needle)

characteristic: tissue

text: Endogenous small RNAs from Larix leptolepis seedling


text: twaku

text: live

text: Generic

text: The genomic DNA from each of 4 mouse livers treated with 2 ml/kg CCl4 for 2 weeks were pooled. The genomic DNA from 3 mouse livers treated with olive oil for 2 weeks was pooled and used as control. The genomic DNA purified from the CCl4-treated mouse liver specimens was randomly fragmented into 50-350 bp lengths as described in the SOLiD 5500xl fragment library protocol. The fragmented DNA was then subjected to the MethylMiner methylated DNA enrichment kit according to the manufacturer’s protocol. These methylated fragments were eluted with 1000 mM NaCl and used to construct standard fragment libraries using a combination of adaptor ligation and nick translation (SOLiD Fragment Library Construction Kit, Invitrogen). Each DNA library was selected on the basis of size (inserts were approximately 500 bp) by AgencourtAMPure XP (Beckman) before PCR amplification, bead attachment, and emulsion PCR.

characteristic: description

text: Mus musculus

text: Global analysis of DNA methylation in early-stage liver fibrosis

characteristic: title


text: Institute for Genome Sciences University of MD School of Medicine

characteristic: INSDC secondary accession

text: live

text: Generic

text: Escherichia coli TW09098

characteristic: strain

text: Escherichia coli TW09098


text: CIC bioGUNE

text: live

characteristic: INSDC status

text: Generic

text: Pool a of 50 homozygous Df(2L)32FP-5/Df(2L)32FP-5 (sall-/-) embryos collected at early stage 16 (13-14 hours of egg development at 25*C)

text: Drosophila melanogaster


text: CIC bioGUNE

text: live

text: Generic

text: Pool b of 50 homozygous Df(2L)32FP-5/Df(2L)32FP-5 (sall-/-) embryos collected at early stage 16 (13-14 hours of egg development at 25*C)

text: Drosophila melanogaster


text: CIC bioGUNE

text: live

text: Generic

text: Pool c of 50 homozygous Df(2L)32FP-5/Df(2L)32FP-5 (sall-/-) embryos collected at early stage 16 (13-14 hours of egg development at 25*C)

text: Drosophila melanogaster


text: CIC bioGUNE

text: live

text: Generic

text: Pool c of 50 heterozygous Df(2L)32FP-5/ (sall /-) embryos collected at early stage 16 (13-14 hours of egg development at 25*C).

text: Drosophila melanogaster

text: sal /-16


text: CIC bioGUNE

text: live

text: Generic

text: Pool c of 50 Oregon R (sall / ) embryos collected at early stage 16 (13-14 hours of egg development at 25*C).

text: Drosophila melanogaster


text: CIC bioGUNE

text: live

text: Generic

text: Pool a of 50 homozygous Df(2L)32FP-5/Df(2L)32FP-5 (sall-/-) embryos collected at early stage 17 (around 16 hours of egg development at 25*C)

text: Drosophila melanogaster


text: CIC bioGUNE

text: live

text: Generic

text: Pool b of 50 homozygous Df(2L)32FP-5/Df(2L)32FP-5 (sall-/-) embryos collected at early stage 17 (around 16 hours of egg development at 25*C)

text: Drosophila melanogaster


text: CIC bioGUNE

text: live

text: Generic

text: Pool c of 50 homozygous Df(2L)32FP-5/Df(2L)32FP-5 (sall-/-) embryos collected at early stage 17 (around 16 hours of egg development at 25*C)

text: Drosophila melanogaster


text: CIC bioGUNE

text: live

text: Generic

text: Pool c of 50 heterozygous Df(2L)32FP-5/ (sall /-) embryos collected at early stage 17 (around 16 hours of egg development at 25*C).

text: Drosophila melanogaster

text: sal /-17


text: University of California, Los Angeles

text: live

text: Generic

text: anti Myc antibody, clone 4A6

characteristic: chip antibody

text: Millipore

characteristic: chip antibody vendor

characteristic: ecotype

text: Arabidopsis thaliana

text: HTR5 Myc ChIP-seq

text: 10 day seedlings

text: HTR5 Myc ChIP-seq


characteristic: External Id

text: University of California, Los Angeles

text: live

text: Generic

characteristic: NCBI submission model

text: anti Myc antibody, clone 4A6

text: Millipore

text: Arabidopsis thaliana

text: HTR13 Myc ChIP-seq

text: 10 day seedlings

text: HTR13 Myc ChIP-seq


text: University of California, Los Angeles

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Arabidopsis thaliana

text: input genomic DNA for HTR5

text: 10 day seedlings

text: input genomic DNA for HTR5


text: University of California, Los Angeles

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Arabidopsis thaliana

text: input genomic DNA for HTR13

text: 10 day seedlings

text: input genomic DNA for HTR13


text: University of California, Los Angeles

characteristic: INSDC last update

text: live

text: Generic

text: Arabidopsis thaliana

characteristic: organism

text: Col-0 RNA-seq

text: 10 day seedlings

text: Col-0 RNA-seq


text: CIC bioGUNE

text: live

text: Generic

text: Pool c of 50 Oregon R (sall / ) embryos collected at early stage 17 (around 16 hours of egg development at 25*C).

text: Drosophila melanogaster


text: MIT

text: live

text: Generic

characteristic: background strain

text: KRasG12D,p53 -/- murine sarcoma cells

characteristic: cell type

text: Dicer f/-

characteristic: genotype

text: Mus musculus

text: Dicer f/- murine sarcoma cell line (KRasG12D,p53 -/-)


text: MIT

characteristic: INSDC secondary accession

text: live

text: Generic

text: KRasG12D,p53 -/- murine sarcoma cells

text: Dicer -/-

text: Mus musculus

text: Dicer -/- murine sarcoma cell line (KRasG12D,p53 -/-) derived from Dicer f/- parental line

characteristic: title


Taenia multiceps

text: Sichuan Agricultural University

text: live

characteristic: INSDC status

text: Generic

text: Adult stage of Taenia multiceps from the dog intestine.

characteristic: description

text: Taenia multiceps

text: Adult stage of Taenia multiceps


text: twaku

text: live

text: Generic

text: Mus musculus


text: live

text: Generic

text: Escherichia coli TW14301

characteristic: strain

text: Escherichia coli TW14301


text: University of Delaware

text: live

text: Generic

text: CHO-K1 cells maintained in IMDM and 10% FBS. Small RNAs were extracted during stationary phase of cell culture.

text: Cricetulus griseus

text: CHO-K1 library


Lung 1 day post-infection

text: University Health Network

text: live

text: Generic

text: Mustela putorius furo

text: Ferret infected with A/California/07/2009, lung tissue, 1d.p.i.


text: IGDB

text: live

text: Generic

text: 14 days after germination

characteristic: developmental stage

text: Glycine max

text: roots

text: roots

characteristic: tissue

text: BS-seq of roots


characteristic: External Id

text: IGDB

text: live

text: Generic

characteristic: NCBI submission model

text: 14 days after germination

text: Glycine max

text: stems

text: stems

text: BS-seq of stems


text: IGDB

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: 14 days after germination

text: Glycine max

text: leaves

text: leaves

text: BS-seq of leaves


text: IGDB

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: 20 days after flowering

text: Glycine max

text: cotyledons

text: cotyledons

text: BS-seq of cotyledons


CHO-SEAP

text: University of Delaware

characteristic: INSDC last update

text: live

text: Generic

text: Recombinant CHO cells producing secreted alkaline phosphatase (CHO-SEAP) maintained in IMDM and 10% FBS. Small RNAs were extracted during stationary phase of cell culture.

text: Cricetulus griseus

characteristic: organism

text: CHO-SEAP library


CHO-tPA

text: University of Delaware

text: live

text: Generic

text: Recombinant CHO cells producing tissue plasminogen activator (CHO-tPA) maintained in IMDM and 10% FBS. Small RNAs were extracted during stationary phase of cell culture.

text: Cricetulus griseus

text: CHO-tPA library


Lung 3 day post-infection

text: University Health Network

text: live

text: Generic

text: Mustela putorius furo

text: Ferret infected with A/California/07/2009, lung tissue, 3d.p.i.