text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence ATAGATAGAC

text: Bacteria

text: Saliva


status: PUBLIC

characteristic: External Id

text: Academic Centre for Dentistry Amsterdam

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Saliva sample, barcode sequence CACGCTACGT

characteristic: description

text: Bacteria

characteristic: organism

text: Saliva

characteristic: title


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence TCTCTATGCG

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence CAGTAGACGT

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence TGATACGTCT

text: Bacteria

text: Saliva


text: University of Maryland School of Medicine, Institute for Genome Sciences

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

tag: attribute

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

text: human-associated habitat [ENVO:00009003]

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Tennessee

text: not determined

text: blood

characteristic: host body product

text: bacteremia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

characteristic: isolate

text: not determined

characteristic: isolation and growth condition

text: blood

text: blood

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae 3063-00

text: Pneumococcal Multidrug Resistance And Vaccine Escape

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Emerging Infections Program (CDC)

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae 3063-00

type: AMR curated data - CABBAGE

value: chloramphenicol

value: susceptible

value: Streptococcus pneumoniae

value: erythromycin

value: resistant

value: penicillin

value: cefotaxime

value: tetracycline


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Maryland

text: not determined

text: blood

text: not determined

text: not determined

text: not determined

text: blood

text: blood

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae 7286-06

characteristic: organism

text: not determined

text: not determined

text: Emerging Infections Program (CDC)

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae 7286-06

characteristic: title


characteristic: External Id

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: Streptococcus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

characteristic: host body product

text: bacteremia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

characteristic: isolate

text: not determined

characteristic: isolation and growth condition

text: blood

text: blood

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA47033

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA47033

value: ceftriaxone

value: telithromycin

value: rifampin

value: levofloxacin

value: quinupristin-dalfopristin

value: ciprofloxacin

value: meropenem

value: vancomycin

value: amoxicillin

value: clindamycin

value: intermediate

value: trimethoprim-sulfamethoxazole


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Georgia

text: not determined

text: blood

text: otitis

text: not determined

text: not determined

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA47179

characteristic: organism

text: not determined

text: not determined

text: Georgia Emerging Infections Program

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA47179

characteristic: title


characteristic: External Id

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: USA: Georgia

text: not determined

text: blood

characteristic: host body product

text: pneumonia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA47210

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA47210


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: cerebrospinal fluid [ENVO:02000029]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: cerebrospinal fluid

text: meningitis, sinusitis, mastoiditis

text: not determined

characteristic: isolate

text: not determined

text: CSF

text: central nervous system

text: DNeasy

text: not determined

text: Streptococcus pneumoniae GA47281

characteristic: organism

text: not determined

text: not determined

text: Georgia Emerging Infections Program

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA47281

characteristic: title

value: cefuroxime

value: Streptococcus pneumoniae

value: chloramphenicol

value: susceptible

value: linezolid

value: erythromycin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: Streptococcus

text: USA: Georgia

text: not determined

text: Homo sapiens

text: blood

characteristic: host body product

text: pneumonia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: blood

text: blood

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA47283

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: 12 mL

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA47283

value: tetracycline

value: penicillin

value: telithromycin

value: ceftriaxone


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

text: pneumonia, septic shock

text: not determined

characteristic: isolate

text: not determined

text: blood

text: blood

text: DNeasy

text: not determined

text: Streptococcus pneumoniae GA47360

characteristic: organism

text: not determined

text: not determined

text: Georgia Emerging Infections Program

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA47360

characteristic: title

value: levofloxacin

value: quinupristin-dalfopristin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: Streptococcus

text: USA: Georgia

text: not determined

text: Homo sapiens

text: blood

characteristic: host body product

text: bacteremia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: blood

text: blood

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA47368

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: 10-12 mL

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA47368

value: rifampin

value: resistant

value: meropenem

value: cefotaxime

value: ciprofloxacin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

text: pneumonia

text: not determined

characteristic: isolate

text: not determined

text: blood

text: blood

text: combination

text: not determined

text: Streptococcus pneumoniae GA47373

characteristic: organism

text: not determined

text: not determined

text: Georgia Emerging Infections Program

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA47373

characteristic: title

value: cefuroxime

value: trimethoprim-sulfamethoxazole

value: amoxicillin

value: clindamycin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: Streptococcus

text: USA: Georgia

text: not determined

text: Homo sapiens

text: blood

characteristic: host body product

text: pneumonia, septic shock

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: blood

text: blood

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA47388

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA47388

value: linezolid

value: susceptible

value: Streptococcus pneumoniae

value: vancomycin

value: chloramphenicol


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

text: pneumonia

text: not determined

characteristic: isolate

text: not determined

text: blood

text: blood

text: DNeasy

text: not determined

text: Streptococcus pneumoniae GA47439

characteristic: organism

text: not determined

text: not determined

text: Georgia Emerging Infections Program

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA47439

characteristic: title

value: ceftriaxone

value: penicillin

value: telithromycin

value: erythromycin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: USA: Oregon

text: not determined

text: blood

characteristic: host body product

text: not determined

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae 7533-05

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Emerging Infections Program (CDC)

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae 7533-05


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.human-associated

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Georgia

text: not determined

text: blood

text: pneumonia

text: not determined

text: not determined

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA47461

characteristic: organism

text: not determined

text: not determined

text: Georgia Emerging Infections Program

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA47461

characteristic: title


text: University of Maryland School of Medicine, Institute for Genome Sciences

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

characteristic: host body product

text: pneumonia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

characteristic: isolate

text: not determined

characteristic: isolation and growth condition

text: blood

text: blood

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA47502

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA47502

value: levofloxacin

value: intermediate

value: quinupristin-dalfopristin

value: resistant

value: rifampin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

text: human-associated habitat [ENVO:00009003]

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Georgia

text: not determined

text: blood

text: bacteremia

text: not determined

text: not determined

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA47522

characteristic: organism

text: Pneumococcal Multidrug Resistance And Vaccine Escape

text: not determined

text: not determined

text: Georgia Emerging Infections Program

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA47522

characteristic: title


characteristic: External Id

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: not determined

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: not determined

text: USA: Georgia

text: not determined

text: blood

characteristic: host body product

text: pneumonia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA47562

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA47562


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Georgia

text: not determined

text: blood

text: pneumonia, pancreatitis

text: not determined

text: not determined

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA47597

characteristic: organism

text: not determined

text: not determined

text: Georgia Emerging Infections Program

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA47597

characteristic: title


characteristic: External Id

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

text: terrestrial biome [ENVO:00000446]

text: not determined

text: USA: Georgia

text: not determined

text: not determined

characteristic: host body product

text: septic arthritis

characteristic: host disease

characteristic: host taxid

text: joint

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA47628

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA47628


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

text: pneumonia

text: not determined

characteristic: isolate

text: not determined

text: blood

text: blood

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA47688

characteristic: organism

text: not determined

text: 12 mL

text: Georgia Emerging Infections Program

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA47688

characteristic: title

value: trimethoprim-sulfamethoxazole

value: cefotaxime

value: tetracycline

value: meropenem

value: cefuroxime


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: Streptococcus

text: USA: Georgia

text: not determined

text: Homo sapiens

text: blood

characteristic: host body product

text: pneumonia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: blood

text: blood

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA47751

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA47751

value: ciprofloxacin

value: Streptococcus pneumoniae

value: susceptible

value: linezolid

value: amoxicillin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Georgia

text: not determined

text: blood

text: pneumonia

text: not determined

text: not determined

text: DNeasy

text: not determined

text: Streptococcus pneumoniae GA47760

characteristic: organism

text: not determined

text: not determined

text: Georgia Emerging Infections Program

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA47760

characteristic: title


characteristic: INSDC first public

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

characteristic: host body product

text: pneumonia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

characteristic: isolate

text: not determined

characteristic: isolation and growth condition

text: blood

text: blood

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA47778

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: 12 mL

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA47778

value: penicillin

value: vancomycin

value: chloramphenicol

value: clindamycin

value: telithromycin

value: ceftriaxone


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Minnesota

text: not determined

text: blood

text: not determined

text: not determined

text: not determined

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae 7879-04

characteristic: organism

text: not determined

text: not determined

text: Emerging Infections Program (CDC)

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae 7879-04

characteristic: title


characteristic: External Id

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: USA: Georgia

text: not determined

text: blood

characteristic: host body product

text: meningitis

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA47794

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA47794


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

text: pneumonia

text: not determined

characteristic: isolate

text: not determined

text: blood

text: blood

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA47901

characteristic: organism

text: not determined

text: 10-12 mL

text: Georgia Emerging Infections Program

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA47901

characteristic: title

value: quinupristin-dalfopristin

value: rifampin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: Streptococcus

text: USA: Georgia

text: not determined

text: Homo sapiens

text: blood

characteristic: host body product

text: pneumonia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: blood

text: blood

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA47976

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA47976

value: cefotaxime

value: levofloxacin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

text: pneumonia

text: not determined

characteristic: isolate

text: not determined

text: blood

text: blood

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA49138

characteristic: organism

text: not determined

text: not determined

text: Georgia Emerging Infections Program

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA49138

characteristic: title

value: meropenem

value: intermediate

value: tetracycline

value: resistant

value: trimethoprim-sulfamethoxazole


characteristic: External Id

text: University of Maryland School of Medicine, Institute for Genome Sciences

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: USA: Georgia

text: not determined

text: blood

characteristic: host body product

text: bacteremia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA49194

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA49194


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

text: human-associated habitat [ENVO:00009003]

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

text: pneumonia

text: not determined

characteristic: isolate

text: not determined

text: blood

text: blood

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA49447

characteristic: organism

text: not determined

text: not determined

text: Georgia Emerging Infections Program

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA49447

characteristic: title

value: Streptococcus pneumoniae

value: susceptible

value: ciprofloxacin

value: cefuroxime

value: erythromycin

value: linezolid


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: USA: Georgia

text: not determined

text: blood

characteristic: host body product

text: pneumonia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: combination

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA49542

text: Pneumococcal Multidrug Resistance And Vaccine Escape

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA49542


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

text: bacteremia

text: not determined

characteristic: isolate

text: not determined

text: blood

text: blood

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA52306

characteristic: organism

text: not determined

text: 12 mL

text: Georgia Emerging Infections Program

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA52306

characteristic: title

value: amoxicillin

value: penicillin

value: clindamycin

value: vancomycin

value: chloramphenicol


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: not determined

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: not determined

text: not determined

text: blood

characteristic: host body product

text: pneumonia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA52612

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA52612


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.human-associated

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: cerebrospinal fluid [ENVO:02000029]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Georgia

text: not determined

text: cerebrospinal fluid

text: meningitis

text: not determined

text: not determined

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA54354

characteristic: organism

text: not determined

text: not determined

text: Georgia Emerging Infections Program

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA54354

characteristic: title


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: USA: Connecticut

text: not determined

text: blood

characteristic: host body product

text: not determined

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae 8190-05

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Emerging Infections Program (CDC)

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae 8190-05


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

text: pneumonia

text: not determined

characteristic: isolate

text: not determined

text: blood

text: blood

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA54644

characteristic: organism

text: not determined

text: not determined

text: Georgia Emerging Infections Program

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA54644

characteristic: title

value: rifampin

value: quinupristin-dalfopristin

value: cefotaxime

value: levofloxacin

value: ceftriaxone

value: telithromycin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: USA: Georgia

text: not determined

text: blood

characteristic: host body product

text: pneumonia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA56113

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA56113


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.human-associated

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Georgia

text: not determined

text: blood

text: pneumonia

text: not determined

text: not determined

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA56348

characteristic: organism

text: not determined

text: not determined

text: Georgia Emerging Infections Program

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA56348

characteristic: title


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: USA: Georgia

text: not determined

text: blood

characteristic: host body product

text: pneumonia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA58581

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA58581


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.human-associated

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Georgia

text: not determined

text: blood

text: otitis

text: not determined

text: not determined

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA58771

characteristic: organism

text: not determined

text: not determined

text: Georgia Emerging Infections Program

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA58771

characteristic: title


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: USA: Georgia

text: not determined

text: blood

characteristic: host body product

text: meningitis, sinusitis

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA60080

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA60080


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.human-associated

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Georgia

text: not determined

text: blood

text: pneumonia

text: not determined

text: not determined

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA60190

characteristic: organism

text: not determined

text: not determined

text: Georgia Emerging Infections Program

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA60190

characteristic: title


text: University of Maryland School of Medicine, Institute for Genome Sciences

text: live

text: NLD

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: cerebrospinal fluid [ENVO:02000029]

text: Streptococcus

characteristic: genus

text: Netherlands

text: not determined

text: cerebrospinal fluid

characteristic: host body product

text: meningitis

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

characteristic: isolate

text: not determined

characteristic: isolation and growth condition

text: CSF

text: central nervous system

text: DNeasy

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: 12 mL

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Pneumococcal Molecular Epidemiology Network

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae Netherlands15B-37

value: resistant

value: Streptococcus pneumoniae

value: tetracycline

value: trimethoprim-sulfamethoxazole


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

text: human-associated habitat [ENVO:00009003]

characteristic: environment (feature)

text: not determined

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: North Carolina

text: not determined

text: not determined

text: not determined

text: not determined

text: not determined

text: DNeasy

text: not determined

characteristic: organism

text: not determined

text: not determined

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae NorthCarolina6A-23

characteristic: title

value: erythromycin


characteristic: External Id

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: not determined

text: USA: Georgia

text: not determined

text: not determined

characteristic: host body product

text: not determined

characteristic: host disease

characteristic: host taxid

text: nasopharynx

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae NP070

text: Pneumococcal Multidrug Resistance And Vaccine Escape

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Dr. Pekka Nourti carriage study (CDC)

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae NP070


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

text: not determined

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: not determined

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: United Kingdom: England

text: not determined

text: not determined

text: not determined

text: not determined

text: not determined

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae England14-9

characteristic: organism

text: not determined

text: not determined

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae England14-9

characteristic: title


characteristic: External Id

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: not determined

text: USA: Georgia

text: not determined

text: not determined

characteristic: host body product

text: not determined

characteristic: host disease

characteristic: host taxid

text: nasopharynx

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae NP112

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Dr. Pekka Nourti carriage study (CDC)

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae NP112


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: not determined

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Georgia

text: not determined

text: not determined

text: not determined

text: nasopharynx

text: not determined

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae NP127

characteristic: organism

text: not determined

text: not determined

text: Dr. Pekka Nourti carriage study (CDC)

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae NP127

characteristic: title


characteristic: External Id

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

text: not determined

text: USA: Georgia

text: not determined

text: not determined

characteristic: host body product

text: not determined

characteristic: host disease

characteristic: host taxid

text: nasopharynx

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae NP141

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Dr. Pekka Nourti carriage study (CDC)

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae NP141


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: not determined

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Georgia

text: not determined

text: not determined

text: not determined

text: nasopharynx

text: not determined

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae NP170

characteristic: organism

text: not determined

text: not determined

text: Dr. Pekka Nourti carriage study (CDC)

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae NP170

characteristic: title


characteristic: External Id

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: not determined

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: not determined

characteristic: host body product

text: not determined

characteristic: host disease

characteristic: host taxid

text: nasopharynx

characteristic: investigation type

characteristic: isolate

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae EU-NP01

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Dr. Shabnam Jain carraige study, (Emory Uninversity)

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae EU-NP01

value: susceptible

value: cefuroxime

value: meropenem

value: intermediate


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: not determined

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Georgia

text: not determined

text: not determined

text: not determined

text: nasopharynx

text: not determined

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae EU-NP02

characteristic: organism

text: not determined

text: not determined

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae EU-NP02

characteristic: title


characteristic: External Id

characteristic: INSDC center name

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

text: terrestrial biome [ENVO:00000446]

text: not determined

text: USA: Georgia

text: not determined

text: not determined

characteristic: host body product

text: not determined

characteristic: host disease

characteristic: host taxid

text: nasopharynx

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae EU-NP03

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae EU-NP03


characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: not determined

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Georgia

text: not determined

text: not determined

text: not determined

text: nasopharynx

text: not determined

text: combination

text: not determined

text: Streptococcus pneumoniae EU-NP04

characteristic: organism

text: not determined

text: not determined

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae EU-NP04

characteristic: title


characteristic: External Id

text: University of Maryland School of Medicine, Institute for Genome Sciences

characteristic: INSDC center name

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

text: terrestrial biome [ENVO:00000446]

text: not determined

text: USA: Georgia

text: not determined

text: not determined

characteristic: host body product

text: not determined

characteristic: host disease

characteristic: host taxid

text: nasopharynx

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae EU-NP05

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: 12 mL

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae EU-NP05


characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Maryland

text: not determined

text: blood

text: not determined

text: not determined

characteristic: isolate

text: not determined

text: blood

text: blood

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae 4027-06

characteristic: organism

text: not determined

text: not determined

text: Emerging Infections Program (CDC)

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae 4027-06

characteristic: title

value: penicillin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

text: human-associated habitat [ENVO:00009003]

text: blood [ENVO:02000020]

text: USA: Georgia

text: not determined

text: blood

characteristic: host body product

text: bacteremia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA02254

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA02254


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.human-associated

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Georgia

text: not determined

text: blood

text: bacteremia

text: not determined

text: not determined

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA02270

characteristic: organism

text: Pneumococcal Multidrug Resistance And Vaccine Escape

text: not determined

text: not determined

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA02270

characteristic: title


characteristic: INSDC first public

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: USA: Georgia

text: not determined

text: blood

characteristic: host body product

text: bacteremia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA02506

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA02506


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.human-associated

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Georgia

text: not determined

text: blood

text: bacteremia

text: not determined

text: not determined

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA02714

characteristic: organism

text: not determined

text: not determined

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA02714

characteristic: title


characteristic: INSDC first public

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: USA: Georgia

text: not determined

text: blood

characteristic: host body product

text: bacteremia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA04175

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: 12 mL

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA04175


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.human-associated

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Georgia

text: not determined

text: blood

text: bronchitis

text: not determined

text: not determined

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA04216

characteristic: organism

text: not determined

text: not determined

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA04216

characteristic: title


characteristic: INSDC first public

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

characteristic: host body product

text: bacteremia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

characteristic: isolate

text: not determined

characteristic: isolation and growth condition

text: blood; carriage

text: DNeasy

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA04375

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: 10-12 mL

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA04375

value: clindamycin

value: chloramphenicol

value: ofloxacin

value: cefaclor

value: vancomycin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Georgia

text: not determined

text: blood

text: bacteremia

text: not determined

text: not determined

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA04672

characteristic: organism

text: not determined

text: not determined

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA04672

characteristic: title


characteristic: External Id

characteristic: INSDC center name

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: USA: Georgia

text: not determined

text: blood

characteristic: host body product

text: pneumonia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA05245

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA05245


characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Georgia

text: not determined

text: blood

text: bacteremia

text: not determined

text: not determined

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA05248

characteristic: organism

text: not determined

text: not determined

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA05248

characteristic: title


characteristic: External Id

characteristic: INSDC center name

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: USA: Oregon

text: not determined

text: blood

characteristic: host body product

text: otitis

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae 4075-00

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Emerging Infections Program (CDC)

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae 4075-00


characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Georgia

text: not determined

text: blood

text: pneumonia

text: not determined

text: not determined

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA05578

characteristic: organism

text: not determined

text: not determined

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA05578

characteristic: title


characteristic: External Id

text: University of Maryland School of Medicine, Institute for Genome Sciences

characteristic: INSDC center name

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: USA: Georgia

text: not determined

text: blood

characteristic: host body product

text: bacteremia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA06083

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA06083


characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

text: bacteremia

text: not determined

characteristic: isolate

text: not determined

text: blood

text: blood

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA07228

characteristic: organism

text: not determined

text: 12 mL

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA07228

characteristic: title

value: cefotaxime

value: rifampin

value: trovafloxacin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: human-associated habitat [ENVO:00009003]

text: blood [ENVO:02000020]

text: Streptococcus

text: USA: Georgia

text: not determined

text: Homo sapiens

text: blood

characteristic: host body product

text: pneumonia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: blood

text: blood

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA07643

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA07643

value: resistant

value: Streptococcus pneumoniae

value: quinupristin-dalfopristin


characteristic: External Id

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Georgia

text: not determined

text: blood

text: pneumonia

text: not determined

text: not determined

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA07914

characteristic: organism

text: Pneumococcal Multidrug Resistance And Vaccine Escape

text: not determined

text: not determined

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA07914

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

characteristic: host body product

text: bacteremia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

characteristic: isolate

text: not determined

characteristic: isolation and growth condition

text: blood

text: blood

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA08780

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA08780

value: tetracycline

value: erythromycin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Georgia

text: not determined

text: blood

text: bacteremia

text: not determined

text: not determined

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA08825

characteristic: organism

text: not determined

text: not determined

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA08825

characteristic: title


characteristic: External Id

characteristic: INSDC center name

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

characteristic: host body product

text: not determined

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

characteristic: isolate

text: not determined

characteristic: isolation and growth condition

text: blood

text: blood

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA11184

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: 12 mL

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA11184

value: levofloxacin

value: susceptible

value: trimethoprim-sulfamethoxazole

value: amoxicillin

value: cefuroxime


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

text: blood

text: pneumonia

text: not determined

text: not determined

text: blood

text: blood

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA11304

characteristic: organism

text: not determined

text: 12 mL

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA11304

characteristic: title

value: clindamycin

value: meropenem

value: intermediate

value: penicillin

value: chloramphenicol