text: University of Virginia

text: live

text: Generic

text: Homo sapiens

text: GM Library 1


status: PUBLIC

characteristic: External Id

text: University of Virginia

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Homo sapiens

characteristic: organism

characteristic: title


text: DBI, Plant and Soil Sciences, University of Delaware

text: live

text: Generic

text: Oryza sativa Japonica Group

text: leaf tissue

tag: attribute

text: leaf

characteristic: tissue

text: Nipponbare [sRNA-Seq]


text: live

text: Generic

text: Oryza sativa Indica Group

text: leaf tissue

text: leaf

text: 93-11 [sRNA-Seq]


text: live

text: Generic

text: Oryza sativa Japonica Group x Oryza sativa Indica Group

text: leaf tissue

text: leaf

text: NPB X 93-11 [sRNA-Seq]


text: live

text: Generic

text: Oryza sativa Indica Group x Oryza sativa Japonica Group

text: leaf tissue

text: leaf

text: 93-11 X NPB [sRNA-Seq]


text: live

text: Generic

text: Oryza sativa Japonica Group

text: leaf tissue

text: leaf

text: Nipponbare [RNA-Seq]


text: live

text: Generic

text: Oryza sativa Indica Group

text: leaf tissue

text: leaf

text: 93-11 [RNA-Seq]


text: live

text: Generic

text: leaf tissue

text: leaf

text: NPB X 93-11 [RNA-Seq]


text: live

text: Generic

text: leaf tissue

text: leaf

text: 93-11 X NPB [RNA-Seq]


text: Beijing Institute of Genomics, Chinese Academy of Sciences

text: live

text: Generic

characteristic: antibody

text: Mus musculus

text: testis RNA pulled down with ALKBH5 antibody

text: ICR

characteristic: strain

text: testis

text: RIP


text: live

text: Generic

text: IgG

text: Mus musculus

text: testis RNA pulled down with IgG

text: ICR

text: testis

text: CON


Isolate LT30 - 454 GS FLX genome

text: Jon Hulvey

text: live

text: Generic

text: Partial genome sequencing of Sclerotinia homoeocarpa using the 454 GS FLX sequencing platform.

characteristic: description

characteristic: isolate

text: Clarireedia homoeocarpa LT30

text: General Sample for Sclerotinia homoeocarpa LT30


name: Isolate LT10 untreated - Illumina transcriptome

text: Jon Hulvey

text: live

text: Generic

text: Transcriptome sequencing of Sclerotinia homoeocarpa using Illumina sequencing platform.

text: Clarireedia homoeocarpa

text: General Sample for Sclerotinia homoeocarpa (taxid:38483)


name: Isolate LT10 treated - Illumina transcriptome

text: Jon Hulvey

text: live

text: Generic

text: Clarireedia homoeocarpa


name: Isolate LT11 untreated - Illumina transcriptome

text: Jon Hulvey

text: live

text: Generic

text: Clarireedia homoeocarpa


name: Isolate LT11 treated - Illumina transcriptome

text: Jon Hulvey

text: live

text: Generic

text: Clarireedia homoeocarpa


Isolate LT10 - 454 GS FLX transcriptome

text: Jon Hulvey

text: live

text: Generic

text: Transcriptome sequencing of Sclerotinia homoeocarpa using 454 GS FLX sequencing platform.

text: Clarireedia homoeocarpa


EAB-infested

text: Purdue University

text: live

text: Generic

text: Bark-tissue samples were harvested from EAB-infested North American green ash trees and RNA extracted for transcriptomic profiling via 454 high-throughput sequencing to compare gene-expression profiles of infested and uninfested green ash trees.

text: Fraxinus pennsylvanica

text: Fraxinus pennsylvanica EAB-infested


uninfested control

text: Purdue University

text: live

text: Generic

text: Bark-tissue samples were harvested from uninfested control North American green ash trees and RNA extracted for transcriptomic profiling via 454 high-throughput sequencing to compare gene-expression profiles of infested and uninfested green ash trees.

text: Fraxinus pennsylvanica

text: Fraxinus pennsylvanica uninfested control


F. grandis unexposed 1

text: Texas State University

text: live

text: Generic

text: Two adult fish were taken, during April 2008, from each of the following sites: Port Aransas, TX [27*45'59N, 97*7'33W], Cocodrie, LA [29*15' 13.89 N, 90*39' 45.91 W], and Leeville, LA [29* 12' 43.37N, 90* 09' 08.37 W]. RNA was isolated from livers stored in RNALater (20*C) by homogenizing tissue using ceramic beads homogenizer (Bio101, Savant; Carlsbad, CA). Tissues were place in screw-top 2ml tube with 750 ul of chaotropic reagent, 1.25 g ceramic beads and violently shaken for 40 seconds. Solution was centrifuged and 500 ul of supernatant placed in RNA-free microfuge tube, with 50 ul 2M NaOAc pH 4.0, vortexed; 500ul of acidic phenol was added and vortexed again; then 100 ul of Chloroform:isoamyl alcohol (24:1) was added and vortexed. This solution was centrifuged at 4*C for 20 minutes. The upper-phase was placed in RNA-free microfuge tube and RNA was precipitated with equal volume of isopropanol. RNA pellet was resuspended in chatropic reagent and purified using Qiagen RNA columns following manufacture’s procedures. The sample had a RIN score of 8.4

text: Fundulus grandis

text: Pooled unexposed RNA from western gulf coast estuaries, sample 1


F. grandis unexposed 2

text: Texas State University

text: live

text: Generic

text: Two adults were collected, during April 2008, from each of the following locations: Dauphin Island, AL [30*20' 04.92N, 88* 07'57.21W], Weeks Bay, AL [30*22'41.80N, 87*50'19.60W], Santa Rosa Island, FL [30*21'16.63N, 87* 2' 46.92W], and Florida State University Marine Station, FL [29*54'56.83N, 84*30'39.07W]. RNA was isolated from livers stored in RNALater (20*C) by homogenizing tissue using ceramic beads homogenizer (Bio101, Savant; Carlsbad, CA). Tissues were place in screw-top 2ml tube with 750 ul of chaotropic reagent, 1.25 g ceramic beads and violently shaken for 40 seconds. Solution was centrifuged and 500 ul of supernatant placed in RNA-free microfuge tube, with 50 ul 2M NaOAc pH 4.0, vortexed; 500ul of acidic phenol was added and vortexed again; then 100 ul of Chloroform:isoamyl alcohol (24:1) was added and vortexed. This solution was centrifuged at 4*C for 20 minutes. The upper-phase was placed in RNA-free microfuge tube and RNA was precipitated with equal volume of isopropanol. RNA pellet was resuspended in chatropic reagent and purified using Qiagen RNA columns following manufacture’s procedures. This sample had a RIN score of 8.3.

text: Fundulus grandis

text: Pooled unexposed RNA from western gulf coast estuaries, sample 2


F. grandis exposed 1

text: Texas State University

text: live

text: Generic

text: Adult gulf killifish was collected on June 29, 2010 at Isle Grande Terre, LA [29*16'22.93N, 89*56'41.87W]. RNA from adult male GT fish was isolated as reported in (Whitehead et. al., PNAS 2011). Briefly, liver tissues were dissected from fish field sites immediately following capture and preserved in RNAlater (Ambion, Austin, TX, USA). Total RNA was extracted using TRIzol reagent (Invitrogen, Carlsbad, CA, USA), purified using RNeasy spin columns (Qiagen Inc., Valencia, CA, USA), and RNA quality was verified using microfluidic electrophoresis (Experion instrument and reagents, Bio-Rad Laboratories, Hercules, CA, USA). The sample had a RIN score of 9.7

text: Fundulus grandis

text: Liver RNA from adult fish exposed to oil from Deepwater Horizon oil release, sample 1


F. grandis exposed 2

text: Texas State University

text: live

text: Generic

text: Adult gulf killifish was collected on June 29, 2010 at Isle Grande Terre, LA [29*16'22.93N, 89*56'41.87W]. RNA from adult male GT fish was isolated as reported in (Whitehead et. al., PNAS 2011). Briefly, liver tissues were dissected from fish field sites immediately following capture and preserved in RNAlater (Ambion, Austin, TX, USA). Total RNA was extracted using TRIzol reagent (Invitrogen, Carlsbad, CA, USA), purified using RNeasy spin columns (Qiagen Inc., Valencia, CA, USA), and RNA quality was verified using microfluidic electrophoresis (Experion instrument and reagents, Bio-Rad Laboratories, Hercules, CA, USA). The sample had a RIN score of 9.2

text: Fundulus grandis

text: Liver RNA from adult fish exposed to oil from Deepwater Horizon oil release, sample 2


F. grandis exposed 3

text: Texas State University

text: live

text: Generic

text: Adult gulf killifish was collected on June 29, 2010 at Isle Grande Terre, LA [29*16'22.93N, 89*56'41.87W]. RNA from adult male GT fish was isolated as reported in (Whitehead et. al., PNAS 2011). Briefly, liver tissues were dissected from fish field sites immediately following capture and preserved in RNAlater (Ambion, Austin, TX, USA). Total RNA was extracted using TRIzol reagent (Invitrogen, Carlsbad, CA, USA), purified using RNeasy spin columns (Qiagen Inc., Valencia, CA, USA), and RNA quality was verified using microfluidic electrophoresis (Experion instrument and reagents, Bio-Rad Laboratories, Hercules, CA, USA). The sample had a RIN score of 9.4

text: Fundulus grandis

text: Liver RNA from adult fish exposed to oil from Deepwater Horizon oil release, sample 3


text: Swanson Lab, Genetics, University of Florida

text: live

text: Generic

text: 2-3 months

characteristic: age

text: female

characteristic: gender

text: WT

characteristic: genotype/variation

text: Mus musculus

text: wild-type hippocampus

text: C57BL/6 and 129 SvlmJ mixed

characteristic: strain background

text: hippocampus

text: WT, biological rep1


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: 2-3 months

text: female

text: WT

text: Mus musculus

text: wild-type hippocampus

text: C57BL/6 and 129 SvlmJ mixed

text: hippocampus

text: WT, biological rep2


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 2-3 months

text: female

text: WT

text: Mus musculus

text: wild-type hippocampus

text: C57BL/6 and 129 SvlmJ mixed

text: hippocampus

text: WT, biological rep3


text: live

text: Generic

characteristic: SRA accession

text: 2-3 months

text: female

text: Mus musculus

characteristic: organism

text: MBNL2 ?E2/?E2 hippocampus

text: C57BL/6 and 129 SvlmJ mixed

text: hippocampus

characteristic: tissue

text: MBNL2 KO, biological rep1

characteristic: title


text: live

text: Generic

text: 2-3 months

text: female

text: Mus musculus

text: MBNL2 ?E2/?E2 hippocampus

text: C57BL/6 and 129 SvlmJ mixed

text: hippocampus

text: MBNL2 KO, biological rep2


text: live

text: Generic

text: 2-3 months

text: female

text: Mus musculus

text: MBNL2 ?E2/?E2 hippocampus

text: C57BL/6 and 129 SvlmJ mixed

text: hippocampus

text: MBNL2 KO, biological rep3


Isolate LT11 - 454 GS FLX transcriptome

text: Jon Hulvey

text: live

text: Generic

characteristic: description

characteristic: isolate

text: Clarireedia homoeocarpa


text: Texas Biomedical Research Institute

text: live

text: Generic

text: cDNA prepared with Illumina mRNA-Seq Sample Prep Kit from baboon kidney RNA isolate.

text: Papio hamadryas


text: Neural and Behavioral Sciences, Penn State University College of Medicine

text: live

text: Generic

text: H3K27me3 (07-030, Upstate, Charlottesville, VA, lot 24440, cat.#07-449)

characteristic: chip antibody

characteristic: developmental stage

text: Mus musculus

text: retina

text: Pde6b (rd1/rd1) mutant mice

characteristic: strain

text: retina


characteristic: External Id

text: live

text: Generic

text: H3K4me2 (07-449, Upstate, Charlottesville, VA, lot 26335, cat#07-030)

text: Mus musculus

text: retina

text: Pde6b (rd1/rd1) mutant mice

text: retina


characteristic: INSDC center name

text: live

text: Generic

text: GFP (Santa Cruz, lot #F2508, sc8334)

text: Mus musculus

text: retina

text: Pde6b (rd1/rd1) mutant mice

text: retina


text: Cancer Genomics, Centre for Haemato-Oncology, Barts Cancer Institute

characteristic: INSDC first public

text: live

text: Generic

text: mononuclear cell

characteristic: cell type

text: trisomy 8 (relapse)

characteristic: cytogenetic

text: AML

characteristic: disease state

text: 5-methyl cytosine

characteristic: medip antibody

text: Diagenode

characteristic: medip antibody manufacturer

text: Homo sapiens

text: DNA of AML patient

characteristic: sample type

text: peripheral blood

text: AML 17


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: mononuclear cell

text: trisomy 8 (relapse)

text: AML

text: 5-methyl cytosine

text: Diagenode

text: Homo sapiens

characteristic: organism

text: DNA of AML patient

text: peripheral blood

text: AML 18


text: live

text: Generic

text: mononuclear cell

text: trisomy 8 (relapse)

text: AML

text: 5-methyl cytosine

text: Diagenode

text: Homo sapiens

text: DNA of AML patient

text: peripheral blood

text: AML 19

characteristic: title


PacBio Yeast

characteristic: External Id

text: Cold Spring Harbor Laboratory

text: live

text: Generic

text: Yeast sequenced using v1 chemistry on PacBio RS

characteristic: description

text: Saccharomyces cerevisiae S288C

text: Yeast sequenced with PacBio RS


text: Kathleen Collins, MCB, UC Berkeley

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: anti-Flag

characteristic: antibody

text: Vegetative growth

characteristic: life cycle stage

text: Tetrahymena thermophila

text: small RNAs associated with ZZF-tagged Twi12

text: cells

characteristic: strain

text: Twi12endo native 2-step IP


text: Toyoda Okayama University

text: live

text: Generic

text: Ostbo Red

characteristic: cultivar

text: adult

characteristic: dev-stage

text: Kalmia latifolia

text: leaf

characteristic: tissue-type

text: full-length enriched cDNA library derived from Streptomyces padanus AOK30-colonizing Kalmia latifolia leaves


text: INSA de Lyon, UMR 203 BF2I INRA

characteristic: INSDC last update

text: live

text: Generic

text: This normalized cDNA library was prepared by Evrogen (http://www.evrogen.com/services/cDNA-normalization/service-cdna-normalization_Terms1.shtml). cDNA four-instar larvae symbiotic, four-instar larvae aposymbiotic and four-instar larvae aposymbiotic challenged by Salmonella typhimurium were mixed and ligated into pAL17.3 vector. Around 15000 cDNA were sequenced from this library, starting at the 5' end. Sequencing was done by the Genoscope.

text: Sitophilus oryzae

text: Sitophilus oryzae normalized cDNA library


text: INSA de Lyon, UMR 203 BF2I INRA

text: live

characteristic: INSDC status

text: Generic

text: This non normalized cDNA library was prepared using the Creator SMART cDNA Library Construction kit. cDNA were digested by Sfi restriction enzymes, ligated into pDNRlib and directionaly cloned. Sequencing was done by the Genoscope.

text: Sitophilus oryzae

text: Sitophilus oryzae non-normalized cDNA library


text: INSA de Lyon, UMR 203 BF2I INRA

text: live

text: Generic

characteristic: NCBI submission model

text: This SSH cDNA library (bacteriome aposymbiotic/symbiotic) was prepared by Evrogen using the SMART approach (~http://www.evrogen.com/services/cDNA-subtraction/service-cdna-subtraction_T erms1.shtml). cDNA were digested by RsaI restriction enzymes, substracted and ligated into pAL-16 vector. Around 700 cDNA were sequenced from this library, starting at the 5' end. Sequencing was done by the Genoscope.

text: Sitophilus oryzae

text: Sitophilus oryzae SSH cDNA library (bacteriome aposymbiotic/symbiotic)


text: INSA de Lyon, UMR 203 BF2I INRA

text: live

text: Generic

characteristic: NCBI submission package

text: This SSH cDNA library (four-instar larvae challenged by Salmonella typhimurium/ not challenged) was prepared by Evrogen using the SMART approach (~http://www.evrogen.com/services/cDNA-subtraction/service-cdna-subtraction_T erms1.shtml). cDNA were digested by RsaI restriction enzymes, substracted and ligated into pAL-16 vector. Around 700 cDNA were sequenced from this library, starting at the 5' end. Sequencing was done by the Genoscope.

text: Sitophilus oryzae

text: SSH cDNA library (four-instar larvae challenged/not challenged by Salmonella typhimurium)


text: INSA de Lyon, UMR 203 BF2I INRA

text: live

text: Generic

text: This SSH cDNA library (four-instar larvae not challenged/challenged by Salmonella typhimurium) was prepared by Evrogen using the SMART approac (http://www.evrogen.com/services/cDNA-subtraction/service-cdna-subtraction_Terms1.shtml). cDNA were digested by RsaI restriction enzymes, substracted and ligated into pAL-16 vector. Around 700 cDNA were sequenced from this library, starting at the 5' end. Sequencing was done by the Genoscope.

text: Sitophilus oryzae


text: University of Massachusetts, Amherst

text: live

text: Generic

text: cell line P991

characteristic: cell type

text: Taxus cuspidata

text: MJ+


text: University of Massachusetts, Amherst

text: live

text: Generic

text: cell line P991

text: Taxus cuspidata

characteristic: organism

text: MJ-


text: National Institute of Advanced Industrial Science and Technology

text: live

text: Generic

text: third or fourth larval instar

text: Papilio xuthus

text: epidermis

text: Papilio xuthus epidermis third or fourth larval instar

characteristic: title


characteristic: External Id

text: live

text: Generic

text: third or fourth larval instar

text: Papilio polytes

text: epidermis

text: Papilio polytes epidermis third or fourth larval instar


text: live

text: Generic

text: pupa

text: Papilio polytes

text: wing

text: Papilio polytes wing pupa


text: Beijing Genome Institute

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: Ailuropoda melanoleuca

text: Generic sample from Ailuropoda melanoleuca


text: The University of Tokyo

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: IP_Smc3Ac_WT (HeLa)

characteristic: description

text: Homo sapiens

text: IP_Smc3Ac_WT (HeLa)


text: The University of Tokyo

text: live

text: Generic

text: IP_Smc3Ac_HDAC8 (HeLa)

text: Homo sapiens

text: IP_Smc3Ac_HDAC8 (HeLa)


text: The University of Tokyo

text: live

text: Generic

text: IP_Rad21_WT (HeLa)

text: Homo sapiens

text: IP_Rad21_WT (HeLa)


text: The University of Tokyo

text: live

text: Generic

text: IP_Rad21_HDAC8 (HeLa)

text: Homo sapiens

text: IP_Rad21_HDAC8 (HeLa)


text: The University of Tokyo

text: live

text: Generic

text: input_WT (HeLa)

text: Homo sapiens

text: input_WT (HeLa)


text: The University of Tokyo

text: live

text: Generic

text: input_HDAC8 (HeLa)

text: Homo sapiens

text: input_HDAC8 (HeLa)


text: The University of Tokyo

text: live

text: Generic

text: IP_CTCF (HeLa)

text: Homo sapiens

text: IP_CTCF (HeLa)


text: The University of Tokyo

text: live

text: Generic

text: input_CTCF (HeLa)

text: Homo sapiens

text: input_CTCF (HeLa)


IP_Smc3Ac_WT rep2

text: The University of Tokyo

text: live

text: Generic

text: IP_Smc3Ac_WT rep2 (HeLa)

text: Homo sapiens

text: IP_Smc3Ac_WT rep2 (HeLa)


IP_Smc3Ac_HDAC8 rep2

text: The University of Tokyo

text: live

text: Generic

text: IP_Smc3Ac_HDAC8 rep2 (HeLa)

text: Homo sapiens

text: IP_Smc3Ac_HDAC8 rep2 (HeLa)


IP_Rad21_WT rep2

text: The University of Tokyo

text: live

text: Generic

text: IP_Rad21_WT rep2 (HeLa)

text: Homo sapiens

text: IP_Rad21_WT rep2 (HeLa)


IP_Rad21_HDAC8 rep2

text: The University of Tokyo

text: live

text: Generic

text: IP_Rad21_HDAC8 rep2 (HeLa)

text: Homo sapiens

text: IP_Rad21_HDAC8 rep2 (HeLa)


IP_CTCF rep2

text: The University of Tokyo

text: live

text: Generic

text: IP_CTCF rep2 (HeLa)

text: Homo sapiens

text: IP_CTCF rep2 (HeLa)


IP_Smc3Ac_WT (Fibroblast)

text: The University of Tokyo

text: live

text: Generic

text: IP_Smc3Ac_WT (Fibroblast)

text: Homo sapiens

text: IP_Smc3Ac_WT (Fibroblast)


IP_Smc3Ac_Mut (Fibroblast)

text: The University of Tokyo

text: live

text: Generic

text: IP_Smc3Ac_Mut (Fibroblast)

text: Homo sapiens

text: IP_Smc3Ac_Mut (Fibroblast)


IP_Rad21_WT (Fibroblast)

text: The University of Tokyo

text: live

text: Generic

text: IP_Rad21_WT (Fibroblast)

text: Homo sapiens

text: IP_Rad21_WT (Fibroblast)


IP_Rad21_Mut (Fibroblast)

text: The University of Tokyo

text: live

text: Generic

text: IP_Rad21_Mut (Fibroblast)

text: Homo sapiens

text: IP_Rad21_Mut (Fibroblast)


input WT (Fibroblast)

text: The University of Tokyo

text: live

text: Generic

text: input WT (Fibroblast)

text: Homo sapiens

text: input WT (Fibroblast)


input Mut (Fibroblast)

text: The University of Tokyo

text: live

text: Generic

text: input Mut (Fibroblast)

text: Homo sapiens

text: input Mut (Fibroblast)


IP_Smc3ac_Normal (B-cell)

text: The University of Tokyo

text: live

text: Generic

text: IP_Smc3ac_Normal (B-cell)

text: Homo sapiens

text: IP_Smc3ac_Normal (B-cell)


IP_Smc3ac_CdLS_HDAC8 (B-cell)

text: The University of Tokyo

text: live

text: Generic

text: IP_Smc3ac_CdLS_HDAC8 (B-cell)

text: Homo sapiens

text: IP_Smc3ac_CdLS_HDAC8 (B-cell)


IP_Rad21_Normal (B-cell)

text: The University of Tokyo

text: live

text: Generic

text: IP_Rad21_Normal (B-cell)

text: Homo sapiens

text: IP_Rad21_Normal (B-cell)


IP_Rad21_CdLS_HDAC8 (B-cell)

text: The University of Tokyo

text: live

text: Generic

text: IP_Rad21_CdLS_HDAC8 (B-cell)

text: Homo sapiens

text: IP_Rad21_CdLS_HDAC8 (B-cell)


Input_Normal (B-cell)

text: The University of Tokyo

text: live

text: Generic

text: Input_Normal (B-cell)

text: Homo sapiens

text: Input_Normal (B-cell)


Input_CdLS_HDAC8 (B-cell)

text: The University of Tokyo

text: live

text: Generic

text: Input_CdLS_HDAC8 (B-cell)

text: Homo sapiens

text: Input_CdLS_HDAC8 (B-cell)


Fibroblast RNA-seq WT rep1

text: The University of Tokyo

text: live

text: Generic

text: Fibroblast RNA-seq WT rep1

text: Homo sapiens

text: Fibroblast RNA-seq WT rep1


Fibroblast RNA-seq WT rep2

text: The University of Tokyo

text: live

text: Generic

text: Fibroblast RNA-seq WT rep2

text: Homo sapiens

text: Fibroblast RNA-seq WT rep2


Fibroblast RNA-seq Mut rep1

text: The University of Tokyo

text: live

text: Generic

text: Fibroblast RNA-seq Mut rep1

text: Homo sapiens

text: Fibroblast RNA-seq Mut rep1


Fibroblast RNA-seq Mut rep2

text: The University of Tokyo

text: live

text: Generic

text: Fibroblast RNA-seq Mut rep2

text: Homo sapiens

text: Fibroblast RNA-seq Mut rep2


text: The Ohio State University

text: live

text: Generic

characteristic: genotype

text: Greenhouse, flat tray, 10 days after germination (2 visible leaves with the third one emerging from the whorl)

characteristic: growth conditions

characteristic: inbred

text: Zea mays

text: young leaves from Kn1-N homozygote

text: young immature leaves

characteristic: tissue

text: Kn1-N leaf homo #1


text: The Ohio State University

characteristic: INSDC last update

text: live

text: Generic

text: Zea mays

text: young leaves from Kn1-N homozygote

text: young immature leaves

text: Kn1-N leaf homo #2


text: The Ohio State University

text: live

characteristic: INSDC status

text: Generic

text: Zea mays

text: young leaves from Kn1-N heterozygote

text: young immature leaves

text: Kn1-N leaf het #1


text: The Ohio State University

text: live

text: Generic

characteristic: NCBI submission model

text: Zea mays

text: young leaves from Kn1-N heterozygote

text: young immature leaves

text: Kn1-N leaf het #2


text: The Ohio State University

text: live

text: Generic

characteristic: NCBI submission package

text: Zea mays

text: young leaves from wild-type siblings

text: young immature leaves

text: WT leaf #1


text: The Ohio State University

text: live

text: Generic

text: Zea mays

text: young leaves from wild-type siblings

text: young immature leaves

text: WT leaf #2


text: The Ohio State University

text: live

text: Generic

text: Field (Gill Track, Albany, CA)

text: Zea mays

text: tassel primordia from kn1-e1

text: tassel primordia

text: e1 tassels #1


text: The Ohio State University

text: live

text: Generic

text: Field (Gill Track, Albany, CA)

text: Zea mays

text: tassel primordia from kn1-e1

text: tassel primordia

text: e1 tassels #2


text: The Ohio State University

text: live

text: Generic

text: Field (Gill Track, Albany, CA)

text: Zea mays

text: tassel primordia from kn1-e1

text: tassel primordia

text: e1 tassels #3


text: The Ohio State University

text: live

text: Generic

text: Field (Gill Track, Albany, CA)

text: Zea mays

text: tassel primordia from wild-type

text: tassel primordia

text: WT tassels #1


text: The Ohio State University

text: live

text: Generic

text: Field (Gill Track, Albany, CA)

text: Zea mays

text: tassel primordia from wild-type

text: tassel primordia

text: WT tassels #2


text: The Ohio State University

text: live

text: Generic

text: Field (Gill Track, Albany, CA)

text: Zea mays

text: tassel primordia from wild-type

text: tassel primordia

text: WT tassels #3


text: The Ohio State University

text: live

text: Generic

text: Field (Gill Track, Albany, CA)

text: Zea mays

text: ear primordia from kn1-e1

text: ear primordia

text: e1 ears #1


text: The Ohio State University

text: live

text: Generic

text: Field (Gill Track, Albany, CA)

text: Zea mays

text: ear primordia from kn1-e1

text: ear primordia

text: e1 ears #2


text: The Ohio State University

text: live

text: Generic

text: Field (Gill Track, Albany, CA)

text: Zea mays

text: ear primordia from wild-type

text: ear primordia

text: WT ears #1


text: The Ohio State University

text: live

text: Generic

text: Field (Gill Track, Albany, CA)

text: Zea mays

text: ear primordia from wild-type

text: ear primordia

text: WT ears #2


text: The Ohio State University

text: live

text: Generic

text: Greenhouse, large pots, 19 days after germination (6-7 visible leaves)

text: Zea mays

text: shoot apical meristem from kn1-e1

text: shoot apical meristem

text: e1 SAM #1


text: The Ohio State University

text: live

text: Generic

text: Zea mays

text: shoot apical meristem from kn1-e1

text: shoot apical meristem

text: e1 SAM #2


text: The Ohio State University

text: live

text: Generic

text: Zea mays

text: shoot apical meristem from wild-type

text: shoot apical meristem

text: WT SAM #1


text: The Ohio State University

text: live

text: Generic

text: Zea mays

text: shoot apical meristem from wild-type

text: shoot apical meristem

text: WT SAM #2


text: ENCODE DCC

text: live

text: Generic

characteristic: antibody

text: Mouse monoclonal vs PABPC1 of human, mouse, bovine, can, hamster, Xenopus origin. Antibody Target: PABPC1

characteristic: antibody antibodydescription

text: poly(A) binding protein, cytoplasmic 1 (Homo sapiens).

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Sigma Chemical Co.

characteristic: antibody vendorname

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM12878

characteristic: biomaterial provider

characteristic: cell

text: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus

characteristic: cell description

text: normal

characteristic: cell karyotype

text: mesoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: F

characteristic: cell sex

text: RipSeq

characteristic: datatype

text: RNA IP Sequencing

characteristic: datatype description

text: SunyAlbany

characteristic: lab

text: Tenenbaum - SUNY at Albany

characteristic: lab description

text: Sig_P6246 antibody

characteristic: labversion

text: Homo sapiens

characteristic: replicate


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: 1) Mouse monocloanal vs HuR, Hel-N1, HuC and HuD of mus, rat, hum and Xenopus origin; 2) Rabbit polyclonal. Raised against synthetic peptide, amino acids 3-19 of HuR. Recommended for detection against ELAV1 in human and mouse origin. Antibody Target: ELAVL1

characteristic: antibody antibodydescription

text: (Embryonic lethal, abnormal vision, Drosophila)-like 1 (Huantigen R) (Homo sapiens)

text: SC-5261; 07-1735 is recommended replacement for AB5831

text: 1) Santa Cruz Biotech; 2) Millipore

text: normal

text: mesoderm

text: human

text: F

text: RipSeq

text: RNA IP Sequencing

text: SunyAlbany

text: Tenenbaum - SUNY at Albany

text: SC_5261 antibody

text: Homo sapiens

characteristic: organism

characteristic: title


text: ENCODE DCC

text: live

text: Generic

text: ripInput

text: Total input. Antibody Target: ripInput

text: Total input for comparison for RIP experiments

characteristic: antibody targetdescription

text: RIP Input

characteristic: antibody vendorid

text: Tenenbaum lab

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

characteristic: cell

text: leukemia, The continuous cell line K-562 was established by Lozzio and Lozzio from the pleural effusion of a 53-year-old female with chronic myelogenous leukemia in terminal blast crises. - ATCC

characteristic: cell description

text: cancer

characteristic: cell karyotype

text: mesoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: F

characteristic: cell sex

text: RipSeq

characteristic: datatype

text: RNA IP Sequencing

characteristic: datatype description

text: SunyAlbany

characteristic: lab

text: Tenenbaum - SUNY at Albany

text: Homo sapiens


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Sigma Chemical Co.

text: ATCC

text: cancer

text: mesoderm

text: human

text: F

text: RipSeq

text: RNA IP Sequencing

text: SunyAlbany

text: Tenenbaum - SUNY at Albany

characteristic: lab description

text: Sig_P6246 antibody

characteristic: labversion

text: Homo sapiens

characteristic: replicate


text: ENCODE DCC

text: live

text: Generic

characteristic: antibody antibodydescription

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: 1) Santa Cruz Biotech; 2) Millipore

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

characteristic: cell

characteristic: cell description

text: cancer

characteristic: cell karyotype

text: mesoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: F

characteristic: cell sex

text: RipSeq

text: RNA IP Sequencing

text: SunyAlbany

text: Tenenbaum - SUNY at Albany

text: SC_5261 antibody

text: Homo sapiens

characteristic: organism

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: 1) Mil AB3790 Anti-t7 Epitope tag, T7 (MASMTGGQQMG) 2) Novagen 69522 Negative Control Ab (T7 Tag Mouse Monoclonal). Antibody Target: T7Tag

text: AB3790; Nov_69522

text: 1)Millipore; 2)Novagen

text: normal

text: mesoderm

text: human

text: F

text: RipSeq

characteristic: datatype

text: RNA IP Sequencing

characteristic: datatype description

text: SunyAlbany

characteristic: lab

text: Tenenbaum - SUNY at Albany

text: Nov_69522 antibody

text: Homo sapiens


text: ENCODE DCC

text: live

text: Generic

text: ripInput

text: Total input. Antibody Target: ripInput

characteristic: antibody antibodydescription

characteristic: antibody targetdescription

text: RIP Input

characteristic: antibody vendorid

text: Tenenbaum lab

characteristic: antibody vendorname

characteristic: biomaterial provider

characteristic: cell

characteristic: cell description

text: normal

characteristic: cell karyotype

text: mesoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: F

text: RipSeq

text: RNA IP Sequencing

text: SunyAlbany

text: Tenenbaum - SUNY at Albany

characteristic: lab description

text: Homo sapiens

characteristic: replicate


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Negative Control Ab (T7 Tag Mouse Monoclonal).

text: AB3790; Nov_69522

text: 1)Millipore; 2)Novagen

text: ATCC

text: cancer

text: mesoderm

text: human

text: F

characteristic: cell sex

text: RipSeq

text: RNA IP Sequencing

text: SunyAlbany

text: Tenenbaum - SUNY at Albany

text: Nov_69522 antibody

characteristic: labversion

text: Homo sapiens

characteristic: organism

characteristic: title


text: Massachusetts Eye and Ear Infirmary

text: live

text: Generic

text: Homo sapiens

text: Individual IV-2, Sample EAP309 sequenced at OGI on HiSeq 2000


text: Tennessee State University

text: live

text: Generic

text: adult

characteristic: dev-stage

text: Numida meleagris

text: Pancreas

characteristic: tissue-type

text: Generic sample from Numida Meleagris


text: Massachusetts Eye and Ear Infirmary

text: live

text: Generic

text: Homo sapiens


text: Virgina Tech

text: live

text: Generic

text: embryo

characteristic: dev stage

text: Anopheles stephensi

text: Indian Wild Type (Walter Reid)

characteristic: strain

text: General Sample for Anopheles stephensi (taxid:30069)


4-8 Hour Embryo

characteristic: External Id

text: Virginia Tech

text: live

text: Generic

text: Anopheles stephensi

text: Anopheles stephensi 4-8 Hour Embryo Transcriptome


Heatshock RNA samples 2010

text: Scripps Institution of Oceanography

characteristic: INSDC center name

text: live

text: Generic

text: Tigriopus californicus

text: San Diego or Santa Cruz

text: Tigriopus californicus


text: Biotechnology Research Laboratories, Physiology, Monash University

characteristic: INSDC first public

text: live

text: Generic

text: afferent lymph myeloid cells

characteristic: cell type

text: Ovis aries

characteristic: sample id

text: Afferent lymph myeloid cells, pre-challenge

text: pre-challenge

characteristic: time post-vaccination

text: Sheep 1 Pre

text: vaccination with liposomes+poly (I:C)+ diptheria toxoid

characteristic: treatment


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: afferent lymph myeloid cells

text: Ovis aries

text: pre-challenge

text: Sheep 3 Pre


text: live

text: Generic

characteristic: SRA accession

text: afferent lymph myeloid cells

text: Ovis aries

characteristic: organism

text: pre-challenge

text: Sheep 7 Pre

characteristic: title


text: live

text: Generic

text: afferent lymph myeloid cells

text: Ovis aries

text: Afferent lymph myeloid cells, 4-6 hours

text: 4-6 hours

text: Sheep 3 4-6 hours


text: live

text: Generic

text: afferent lymph myeloid cells

text: Ovis aries

text: Afferent lymph myeloid cells, 4-6 hours

text: 4-6 hours

text: Sheep 7 4-6 hours


text: live

text: Generic

text: afferent lymph myeloid cells

text: Ovis aries

text: Afferent lymph myeloid cells, 26-28 hours

text: 26-28 hours

text: Sheep 1 26-28 hours


text: live

text: Generic

text: afferent lymph myeloid cells

text: Ovis aries

text: 26-28 hours

text: Sheep 3 26-28 hours


text: live

text: Generic

text: afferent lymph myeloid cells

text: Ovis aries

text: Afferent lymph myeloid cells, 51-53 hours

text: 51-53 hours

text: Sheep 1 51-53 hours


text: live

text: Generic

text: afferent lymph myeloid cells

text: Ovis aries

text: 51-53 hours

text: Sheep 3 51-53 hours


text: live

text: Generic

text: afferent lymph myeloid cells

text: Ovis aries

text: 51-53 hours

text: Sheep 7 51-53 hours


text: live

text: Generic

text: afferent lymph myeloid cells

text: Ovis aries

text: Afferent lymph myeloid cells, 76-78 hours

text: 76-78 hours

text: Sheep 1 76-78 hours


text: live

text: Generic

text: afferent lymph myeloid cells

text: Ovis aries

text: 76-78 hours

text: Sheep 3 76-78 hours


text: live

text: Generic

text: afferent lymph myeloid cells

text: Ovis aries

text: 76-78 hours

text: Sheep 7 76-78 hours


text: USDA-AFRS

text: live

text: Generic

text: Lovell

characteristic: cultivar

text: greenhouse seedling roots

characteristic: developmental stage

text: Prunus persica

text: peach root

text: peach root

characteristic: tissue

text: Endogenous small RNAs from peach root


characteristic: External Id

text: USDA-AFRS

characteristic: INSDC center name

text: live

text: Generic

text: Lovell

text: emerging first leaves

text: Prunus persica

text: peach leaf

text: peach leaf

text: Endogenous small RNAs from peach leaf


text: USDA-AFRS

characteristic: INSDC first public

text: live

text: Generic

text: Lovell

text: whole flower

text: Prunus persica

text: peach flower

text: peach flower

text: Endogenous small RNAs from peach flower


text: USDA-AFRS

text: live

text: Generic

text: Lovell

text: mixed stage

text: Prunus persica

text: peach fruit

text: peach fruit

text: Endogenous small RNAs from peach fruit


text: USDA-AFRS

text: live

text: Generic

text: Lovell

text: mixed stage

text: Prunus persica

text: Mixed tissue

text: Mixed tissue

text: Peach degradome sequence


text: Neurodevelopment, Institut de Génomique Fonctionelle de Lyon

text: live

text: Generic

characteristic: cell line

text: C17.2 neural progenitor cells stably expressing tagged thyroid hormone receptor alpha

characteristic: cell type

text: Mus musculus

text: C17.2a neural progenitor cells, untreated, 6h

characteristic: treatment duration


characteristic: INSDC last update

text: live

text: Generic

text: Mus musculus

text: C17.2a neural progenitor cells, T3, 6h

text: 10^-7 M T3 thyroid hormone

characteristic: treatment


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Mus musculus

text: C17.2a neural progenitor cells, untreated, 12h


text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Mus musculus

text: C17.2a neural progenitor cells, T3, 12h

text: 10^-7 M T3 thyroid hormone


text: live

text: Generic

characteristic: SRA accession

text: Mus musculus

characteristic: organism

text: C17.2a neural progenitor cells, untreated, 24h


text: live

text: Generic

text: Mus musculus

text: C17.2a neural progenitor cells, T3, 24h

characteristic: title

text: 10^-7 M T3 thyroid hormone


text: live

text: Generic

text: C17.2 neural progenitor cells stably expressing tagged thyroid hormone receptor beta

text: Mus musculus

text: C17.2b neural progenitor cells, untreated, 6h


text: live

text: Generic

text: Mus musculus

text: C17.2b neural progenitor cells, T3, 6h

text: 10^-7 M T3 thyroid hormone


text: live

text: Generic

text: Mus musculus

text: C17.2b neural progenitor cells, untreated, 12h


text: live

text: Generic

text: Mus musculus

text: C17.2b neural progenitor cells, T3, 12h

text: 10^-7 M T3 thyroid hormone


text: live

text: Generic

text: Mus musculus

text: C17.2b neural progenitor cells, untreated, 24h


text: live

text: Generic

text: Mus musculus

text: C17.2b neural progenitor cells, T3, 24h

text: 10^-7 M T3 thyroid hormone


Tamias alpinus RNA-seq

text: University of California Berkeley

text: live

text: Generic

text: Tamias alpinus

text: Tamias alpinus RNA-seq


Tamias alpinus exon capture

text: University of California Berkeley

text: live

text: Generic

text: Tamias alpinus exon capture data of 20 individually indexed sample libraries.

characteristic: description

text: Tamias alpinus

text: Tamias alpinus exon capture


Tamias amoenus exon capture

text: University of California Berkeley

text: live

text: Generic

text: Tamias amoenus exon capture data of 4 individually indexed sample libraries.

text: Tamias amoenus

text: Tamias amoenus exon capture


Tamias striatus exon capture

text: University of California Berkeley

text: live

text: Generic

text: Tamias striatus exon capture data of 3 individually indexed sample libraries.

text: Tamias striatus

text: Tamias striatus exon capture


text: Richard E. Davis Lab, Biochemistry and Molecular Genetics, University of Colorado Denver

text: live

text: Generic

text: embryo

characteristic: developmental stage

text: Ascaris suum

text: 24hr (1-cell) embryos

text: North American wild population

characteristic: strain

text: 24 hr

characteristic: timepoint


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: embryo

text: Ascaris suum

text: 46hr (1-2-cell) embryos

text: North American wild population

text: 46 hr


text: live

text: Generic

text: embryo

text: Ascaris suum

text: 64hr (2-4-cell) embryos

text: North American wild population

text: 64 hr


text: live

text: Generic

text: larvae

text: Ascaris suum

text: 7 days - Larvae L2

text: North American wild population

text: larvae


text: live

text: Generic

text: adult

text: Ascaris suum

text: intestine

text: North American wild population

text: intestine

characteristic: tissue

text: intestine


characteristic: INSDC last update

text: live

text: Generic

text: adult

text: Ascaris suum

text: muscle (and hypodermis)

text: North American wild population

text: muscle

text: muscle


text: live

text: Generic

text: adult

text: male

characteristic: gender

text: Ascaris suum

text: muscle, hypodermis, pharynx, and neurons

text: North American wild population

text: carcass

text: male carcass


characteristic: INSDC secondary accession

text: live

text: Generic

text: adult

text: female

text: Ascaris suum

text: North American wild population

text: carcass

text: female carcass


text: live

characteristic: INSDC status

text: Generic

text: adult

text: male

text: Ascaris suum

text: testis germinal zone

text: North American wild population

text: testis

text: testis


text: live

text: Generic

characteristic: NCBI submission model

text: adult

text: female

text: Ascaris suum

text: ovary germinal zone

text: North American wild population

text: ovary

text: ovary


text: Institute of Microbiology, Chinese Academy of Sciences

text: live

text: Generic

characteristic: NCBI submission package

characteristic: age

text: colorectal

characteristic: body site

text: colorectal cancer

characteristic: disease

text: feces

characteristic: isolation-source

text: human gut metagenome

text: male

characteristic: sex

text: Homo sapiens

characteristic: specific host

text: gut microbiota 16s rRNA V3 region


text: Universitŕ di Udine

text: live

text: Generic

text: periwinkle

characteristic: host common name

characteristic: host taxid

text: leaf midribs

characteristic: host-tissue-sampled

text: greenhouse maintained

text: Poinsettia branch-inducing phytoplasma str. JR1

characteristic: organism

text: Catharanthus roseus

characteristic: strain

text: Generic sample from Poinsettia branch-inducing phytoplasma

characteristic: title


characteristic: External Id

text: Universitŕ di Udine

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: SRA accession

text: periwinkle

text: leaf midribs

text: greenhouse maintained

text: Italian clover phyllody phytoplasma str. MA1

text: Catharanthus roseus

text: MA

text: Generic sample from Italian clover phyllody phytoplasma


text: Universitŕ di Udine

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: periwinkle

text: leaf midribs

text: greenhouse maintained

text: Milkweed yellows phytoplasma str. MW1

text: Catharanthus roseus

text: Generic sample from Milkweed yellows phytoplasma


VAC

text: Universitŕ di Udine

text: live

text: Generic

text: periwinkle

text: leaf midribs

text: greenhouse maintained

characteristic: isolation-source

text: Vaccinium witches'-broom phytoplasma str. VAC

text: Catharanthus roseus

text: VAC

text: Generic sample from Vaccinium witches'-broom phytoplasma


text: UT MD Anderson Cancer Center

text: live

text: Generic

text: Estrogen-receptor positive luminal A breast cancer used for both population deep-sequencing and single-cell whole genome sequencing

characteristic: description

text: Homo sapiens


Zea mays poly-A selected RNA

text: DOE Joint Genome Institute

text: live

text: Generic

text: Whole seedling (above ground only).

text: Zea mays subsp. mays

text: Zea mays B73 poly-A selected RNA


text: Monash University

text: live

text: Generic

text: Isolation of this strain is described in: Gard GP, Shorthose JE, Weir RP, Erasmus BJ. 1987. The isolation of a bluetongue serotype new to Australia. Aust. Vet. J. 64:87- 88.

text: Bluetongue virus 9

text: Bluetongue Virus, Serotype 9, Strain DPP0837


NWH

text: Duke-NUS postgraduate medical school

text: live

text: Generic

text: NGCII092/CFI - normal tissue

text: Homo sapiens

text: NWH


text: Monash University

text: live

text: Generic

text: Isolation of this strain is described in: St George TD, et al. 1978. The isolation of a bluetongue virus from Culicoides collected in the Northern Territory of Australia. Aust. Vet. J. 54:153-154.

text: Bluetongue virus 20

text: Bluetongue Virus, Serotype 20, Strain CSIRO19


text: Monash University

text: live

text: Generic

text: Isolation of this strain is described in: St George TD, et al. 1980. The isolation of two bluetongue viruses from healthy cattle in Australia. Aust. Vet. J. 56:562-563.

text: Bluetongue virus 21

text: Bluetongue Virus, Serotype 21, Strain DPP86


text: Monash University

text: live

text: Generic

text: Isolation of this strain is described in: Gard GP, Shorthose JE, Cybinski DH, Zakrzewski H. 1985. The isolation from cattle of 2 bluetongue viruses new to Australia. Aust. Vet. J. 62:203.

text: Bluetongue virus 23

text: Bluetongue Virus, Serotype 23, Strain DPP90


text: New Mexico State University

text: live

text: Generic

text: Heterotrophic bacteria from a hospital source wastewater recovered from MHA media containing cefaclor at 16 µg/mL.

text: Bacteria

text: Wastewater bacteria from a treatment plant in Las Cruces, NM, USA


NGH

text: Duke-NUS postgraduate medical school

text: live

text: Generic

text: NGCII082/LTL - normal tissue

text: Homo sapiens

text: NGH


text: Duke-NUS postgraduate medical school

text: live

text: Generic

text: 990005 normal tissue

text: Homo sapiens


text: Duke-NUS postgraduate medical school

text: live

text: Generic

text: 990005 - tumor sample

text: Homo sapiens


Chinese fir mRNA transcriptome database

text: Institute of Botany, Chinese Academy of Sciences

text: live

text: Generic

text: Cunninghamia lanceolata (Lamb.) Hook. plants were grown under standard greenhouse conditions [70% relative humidity and 25/18*C (day/night)]. A total of 20 µg RNA from mature seeds and leaves, stems and roots of 2-month-old young seedlings was pooled equally for cDNA preparation.

text: Cunninghamia lanceolata

text: Chinese fir total RNAs from mature seeds and leaves, stems and roots of 2-month-old young seedlings


Petrosia ficiformis

text: Harvard University

text: live

text: Generic

text: Petrosia ficiformis

text: Assembling transcriptome Petrosia ficiformis


text: Duke-NUS postgraduate medical school

text: live

text: Generic

text: 990089 - normal tissue

text: Homo sapiens


text: Duke-NUS postgraduate medical school

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: normal sample from gastric cancer patient 990515

text: Homo sapiens

characteristic: submitted subject id


SyconRef

text: Harvard University

text: live

text: Generic

text: Sycon coactum

text: Assembling the transcriptome of Sycon coactum


text: Uppsala University

text: live

text: Generic

text: Ostrich samples from Sahlins struts, Borlange, Sweden. Preserved brain and liver tissues in RNAlater (Qiagen, Hilden, Germany). This sample contains pooled RNA from male liver tissue, individual: 7 and 12

text: Struthio camelus

text: Absence of dosage compensation and the arrested stage of sex chromosome evolution in ostriches: LM1


text: Monash University

text: live

text: Generic

text: Isolation of this strain is described in: Lunt R, et al. 2009. Laboratory characterization of BTV-7, a serotype previously not isolated in Australia, p 93-95. In Ryan P, Aaskov J, Russell R (ed), Arbovirus research in Australia. Proceedings of Arbovirus Research in Australia 10, Brisbane, Australia. The Queensland Institute of Medical Research, Brisbane, Australia.

text: Bluetongue virus 7

text: Bluetongue Virus, Serotype 7, Strain DPP6963


text: Monash University

text: live

text: Generic

text: Isolation of this strain is described in: Gard GP, Weir RP, Melville LF, Lunt RA. 1987. The isolation of bluetongue virus types 3 and 16 from northern Australia. Aust. Vet. J. 64:388.

text: Bluetongue virus 3

text: Bluetongue Virus, Serotype 3, Strain DPP973


text: Monash University

text: live

text: Generic

text: Isolation of this strain is described in: Anonymous. 2009. National arbovirus monitoring program report. Animal Health Surveillance Quarterly Report 13:5-7.

text: Bluetongue virus 2

text: Bluetongue Virus, Serotype 2, Strain DPP7291


text: Institute for Genome Sciences University of MD School of Medicine

text: live

text: Generic

text: Escherichia coli 89.0511

text: Escherichia coli 89.0511


text: live

text: Generic

text: Escherichia coli 90.0039

text: Escherichia coli 90.0039


text: live

text: Generic

text: Escherichia coli 88.1042

text: Escherichia coli 88.1042


text: live

text: Generic

text: Escherichia coli 88.1467

text: Escherichia coli 88.1467


text: live

text: Generic

text: Escherichia coli 90.0091

text: Escherichia coli 90.0091


text: live

text: Generic

text: Escherichia coli 90.2281

text: Escherichia coli 90.2281


text: live

text: Generic

text: Escherichia coli 93.0055

text: Escherichia coli 93.0055


text: live

text: Generic

text: Escherichia coli 93.0056

text: Escherichia coli 93.0056


text: LSBM, RCAST

text: live

text: Generic

text: Human umbilical vein cells

characteristic: cell type

characteristic: chip antibody

text: Homo sapiens

text: within 6 passage

characteristic: passage

text: HUVECs

text: HUVEC H3K27Ac DMSO 24hr hypoxia

text: hypoxia 24h

characteristic: treatment


characteristic: External Id

text: LSBM, RCAST

text: live

text: Generic

text: Human umbilical vein cells

text: Homo sapiens

characteristic: organism

text: within 6 passage

text: HUVECs

text: HUVEC H3K27Ac DMSO 24hr normoxia

characteristic: title

text: normoxia 24h


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Escherichia coli 94.0618

characteristic: strain

text: Escherichia coli 94.0618


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: Escherichia coli 95.0183

text: Escherichia coli 95.0183


text: live

text: Generic

characteristic: NCBI submission package

text: Escherichia coli 95.0943

text: Escherichia coli 95.0943


text: live

text: Generic

text: Escherichia coli 95.1288

text: Escherichia coli 95.1288


text: live

text: Generic

text: Escherichia coli 96.0107

text: Escherichia coli 96.0107


text: live

text: Generic

text: Escherichia coli 96.0109

text: Escherichia coli 96.0109


text: live

text: Generic

text: Escherichia coli 96.0427

text: Escherichia coli 96.0427


text: live

text: Generic

text: Escherichia coli 96.0428

text: Escherichia coli 96.0428


text: live

text: Generic

text: Escherichia coli 96.0932

text: Escherichia coli 96.0932


text: live

text: Generic

text: Escherichia coli 96.0939

text: Escherichia coli 96.0939


text: live

text: Generic

text: Escherichia coli 97.0003

text: Escherichia coli 97.0003


text: live

text: Generic

text: Escherichia coli 97.0007

text: Escherichia coli 97.0007


text: live

text: Generic

text: Escherichia coli 97.0010

text: Escherichia coli 97.0010


text: live

text: Generic

text: Escherichia coli 97.1742

text: Escherichia coli 97.1742


text: live

text: Generic

text: Escherichia coli 99.0672

text: Escherichia coli 99.0672


text: live

text: Generic

text: Escherichia coli 99.0678

text: Escherichia coli 99.0678


text: live

text: Generic

text: Escherichia coli 99.0713

text: Escherichia coli 99.0713


text: Burton Lab, Marine Biology Research Division, Scripps Institution of Oceanography

text: live

text: Generic

text: 20 C

characteristic: condition

text: all pooled

characteristic: developmental stage

text: Tigriopus californicus

text: pool of 300-400 individuals

text: San Diego

text: SD contol


text: live

text: Generic

text: 35 C

text: all pooled

text: Tigriopus californicus

text: pool of 300-400 individuals

text: San Diego

text: SD heat-stressed


text: live

text: Generic

text: 20 C

text: all pooled

text: Tigriopus californicus

text: pool of 300-400 individuals

text: Santa Cruz

text: SCN control


text: live

text: Generic

text: 35 C

text: all pooled

text: Tigriopus californicus

text: pool of 300-400 individuals

text: Santa Cruz

text: SCN heat-stressed


text: Palczewski, Pharmacology, Case Western Reserve University

text: live

text: Generic

text: 4 weeks

characteristic: age

text: female

characteristic: gender

text: Wild Type

characteristic: genotype

text: Mus musculus

text: Eye tissue-A/J-1

text: A/J

text: Whole Eye

characteristic: tissue


characteristic: External Id

text: live

text: Generic

text: 4 weeks

text: female

text: Wild Type

text: Mus musculus

characteristic: organism

text: Eye tissue-A/J-2

text: A/J

text: Whole Eye


characteristic: INSDC center name

text: live

text: Generic

text: 4 weeks

text: female

text: Wild Type

text: Mus musculus

text: Eye tissue-A/J-3

text: A/J

text: Whole Eye

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: 4 weeks

text: female

text: Wild Type

text: Mus musculus

text: Eye tissue-BALB/c-1

text: BALB/c

text: Whole Eye


characteristic: INSDC secondary accession

text: live

text: Generic

text: 4 weeks

text: female

text: Wild Type

text: Mus musculus

text: Eye tissue-BALB/c-2

text: BALB/c

characteristic: strain

text: Whole Eye


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: 4 weeks

text: female

text: Wild Type

text: Mus musculus

text: Eye tissue-BALB/c-3

text: BALB/c

text: Whole Eye


text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: 4 weeks

text: female

text: Wild Type

text: Mus musculus

text: Eye tissue-B6-1

text: Whole Eye


text: live

text: Generic

text: 4 weeks

text: female

text: Wild Type

text: Mus musculus

text: Eye tissue-B6-2

text: Whole Eye


text: live

text: Generic

text: 4 weeks

text: female

text: Wild Type

text: Mus musculus

text: Eye tissue-B6-3

text: Whole Eye


text: Molecular Medicine, Medical Sciences, Uppsala University

text: live

text: Generic

text: peripheral blood mononuclear cells (PBMCs)

characteristic: cell type

characteristic: chip antibody

text: Abcam

characteristic: chip antibody vendor

text: Homo sapiens

text: non-stimulated PBMCs_IRF5 ChIP-Seq

text: Blood Donor No.1_non-stimulated PBMCs_IRF5 ChIP-Seq


text: live

text: Generic

text: Abcam

text: Homo sapiens

text: non-stimulated PBMCs_IRF5 ChIP-Seq

text: Blood Donor No.2_non-stimulated PBMCs_IRF5 ChIP-Seq


text: live

text: Generic

text: Abcam

text: Homo sapiens

text: non-stimulated PBMCs_IRF5 ChIP-Seq

text: Blood Donor No.2_non-stimulated PBMCs_IRF5 ChIP-Seq rep


text: live

text: Generic

text: Abcam

text: Homo sapiens

text: non-stimulated PBMCs_IRF5 ChIP-Seq

text: Blood Donor No.3_non-stimulated PBMCs_IRF5 ChIP-Seq


text: live

text: Generic

text: Abcam

text: Homo sapiens

text: stimulated PBMCs_IRF5 ChIP-Seq

text: immune complexes

characteristic: stimulated with

text: Blood Donor No.4_stimulated PBMCs_IRF5 ChIP-Seq


text: live

text: Generic

text: Abcam

text: Homo sapiens

text: stimulated PBMCs_IRF5 ChIP-Seq

text: immune complexes

text: Blood Donor No.5_stimulated PBMCs_IRF5 ChIP-Seq


text: live

text: Generic

text: Abcam

text: Homo sapiens

text: stimulated PBMCs_IRF5 ChIP-Seq

text: immune complexes

text: Blood Donor No.5_stimulated PBMCs_IRF5 ChIP-Seq rep


text: live

text: Generic

text: Abcam

text: Homo sapiens

text: stimulated PBMCs_IRF5 ChIP-Seq

text: immune complexes

text: Blood Donor No.6_stimulated PBMCs_IRF5 ChIP-Seq


text: live

text: Generic

text: Santa Cruz Biotechnology

text: Homo sapiens

text: non-stimulated PBMCs_STAT4 ChIP-Seq

text: Blood Donor No.1_non-stimulated PBMCs_STAT4 ChIP-Seq


text: live

text: Generic

text: Santa Cruz Biotechnology

text: Homo sapiens

text: non-stimulated PBMCs_STAT4 ChIP-Seq

text: Blood Donor No.2_non-stimulated PBMCs_STAT4 ChIP-Seq


text: live

text: Generic

text: Santa Cruz Biotechnology

text: Homo sapiens

text: non-stimulated PBMCs_STAT4 ChIP-Seq

text: Blood Donor No.3_non-stimulated PBMCs_STAT4 ChIP-Seq


text: live

text: Generic

text: Santa Cruz Biotechnology

text: Homo sapiens

text: stimulated PBMCs_STAT4 ChIP-Seq

text: 500 U/ml of IFN-α2b

text: Blood Donor No.4_stimulated PBMCs_STAT4 ChIP-Seq


text: live

text: Generic

text: Santa Cruz Biotechnology

text: Homo sapiens

text: stimulated PBMCs_STAT4 ChIP-Seq

text: 500 U/ml of IFN-α2b

text: Blood Donor No.5_stimulated PBMCs_STAT4 ChIP-Seq


text: live

text: Generic

text: Santa Cruz Biotechnology

text: Homo sapiens

text: stimulated PBMCs_STAT4 ChIP-Seq

text: 500 U/ml of IFN-α2b

text: Blood Donor No.5_stimulated PBMCs_STAT4 ChIP-Seq rep


text: live

text: Generic

text: Santa Cruz Biotechnology

text: Homo sapiens

text: stimulated PBMCs_STAT4 ChIP-Seq

text: 500 U/ml of IFN-α2b

text: Blood Donor No.6_stimulated PBMCs_STAT4 ChIP-Seq


text: Molecular Medicine, Medical Sciences, Uppsala University

text: live

text: Generic

text: control IgG

text: Abcam

text: Homo sapiens

text: Combined IP DNA_non-stimulated PBMCs_Control IgG ChIP-Seq

text: Combined immunoprecipitated DNA from Blood Donor No.1,2,3_non-stimulated PBMCs_Control IgG ChIP-Seq


text: modENCODE DCC, Ontario Institute for Cancer Research

text: live

text: Generic

characteristic: cell line

text: third instar larval stage

characteristic: developmental stage

text: Drosophila melanogaster

text: male

characteristic: sex

text: dorsal mesothoracic disc

characteristic: tissue

text: Cl8-ORC_ChIP-Seq_Input extraction1_seq1 aliquote 1


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: third instar larval stage

text: Drosophila melanogaster

characteristic: organism

text: male

text: dorsal mesothoracic disc

text: Cl8-ORC_ChIP-Seq_IP1 extraction1_seq1 aliquote 1

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: third instar larval stage

text: Drosophila melanogaster

text: male

text: dorsal mesothoracic disc

text: Cl8-ORC_ChIP-Seq_IP2 extraction2_seq1 aliquote 1


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: third instar larval stage

text: Drosophila melanogaster

text: male

text: dorsal mesothoracic disc

text: Cl8-ORC_ChIP-Seq_IP3 extraction3_seq1 aliquote 1


text: live

text: Generic

characteristic: SRA accession

text: third instar larval stage

text: Drosophila melanogaster

text: male

text: dorsal mesothoracic disc

text: Cl8-ORC_ChIP-Seq_IP4 extraction4_seq1 aliquote 1


text: live

text: Generic

text: third instar larval stage

text: Drosophila melanogaster

text: male

text: dorsal mesothoracic disc

text: Cl8-PolII_ChipSeq_Input extraction1_seq1 aliquote 1


text: live

text: Generic

text: third instar larval stage

text: Drosophila melanogaster

text: male

text: dorsal mesothoracic disc

text: Cl8-PolII_ChipSeq_IP1 extraction1_seq1 aliquote 1


text: live

text: Generic

text: third instar larval stage

text: Drosophila melanogaster

text: male

text: dorsal mesothoracic disc

text: Cl8-PolII_ChipSeq_IP2 extraction2_seq1 aliquote 1


text: University of Chicago

text: live

text: Generic

text: male

characteristic: gender

text: Pan troglodytes

text: lymphoblastoid cell line_chimpanzee


text: University of Chicago

text: live

text: Generic

text: female

text: Pan troglodytes

text: lymphoblastoid cell line_chimpanzee


text: University of Chicago

text: live

text: Generic

text: male

text: Macaca mulatta

text: lymphoblastoid cell line_rhesus macaque

text: Mm 153-99


text: University of Chicago

text: live

text: Generic

text: male

text: Macaca mulatta

text: lymphoblastoid cell line_rhesus macaque

text: Mm 265-95


text: University of Chicago

text: live

text: Generic

text: male

text: Macaca mulatta

text: lymphoblastoid cell line_rhesus macaque

text: Mm 256-95


text: University of Chicago

text: live

text: Generic

text: female

text: Macaca mulatta

text: lymphoblastoid cell line_rhesus macaque

text: Mm 150-99


text: University of Chicago

text: live

text: Generic

text: female

text: Macaca mulatta

text: lymphoblastoid cell line_rhesus macaque

text: Mm 173-02


text: University of Chicago

text: live

text: Generic

text: male

text: Macaca mulatta

text: lymphoblastoid cell line_rhesus macaque

text: Mm 303-97


text: Institute for Genome Sciences University of MD School of Medicine

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: human gut metagenome

text: human gut metagenome 174S_0

text: Unvaccinated

characteristic: vaccine treatment

characteristic: volunteer id


text: National Institute of Parasitic Diseases, Chinese Center for Disease Control and Prevention

text: live

text: Generic

text: Armillifer agkistrodontis

text: Pentastomid Nymph cDNA Library


text: Sichuan Agricultural University

text: live

text: Generic

text: Prepared following the Suppression Subtractive Hybridization method using the mix of L693 inoculation with Stripe rust pathogen as tester and L661 with the same treament as driver

characteristic: description

text: stage at 4-5 leaves, during 12 hours to 72 hours after inoculation with Stripe rust pathogen

characteristic: dev-stage

text: Triticum aestivum

text: hermaphrodite

characteristic: sex

characteristic: strain

text: leaves

characteristic: tissue-type

text: SSH-cDNA Library of stripe rust infection in leaves of stripe rust resistant germplasm L693 with susceptibile line L661

text: Plasmid

characteristic: vector


characteristic: External Id

text: National Institute of Allergy and Infectious Diseases

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: salivary gland

characteristic: cell type

text: Colony isolated from El Felta, Sidi Bouzid, Central Tunisia. PCR-based cDNA library made with SMART cDNA library construction kit from Clontech

text: adult

text: salivary gland

characteristic: organ

text: Phlebotomus papatasi

characteristic: organism

text: female

text: salivary gland

text: Adult female Phlebotomus papatasi salivary gland library PPTNC

characteristic: title

text: Lambda TriplEx2


text: Warsaw University of Life Sciences - SGGW

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Leontino

characteristic: cultivar

text: kernel

text: x Triticosecale

text: triticale cDNA fragments, cultivar Leontino


text: Laboratory of Virology and Genetics, EPFL SV-GHI

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: T cell progenitors

text: RBCC (KAP1 amino acids 20-418)

characteristic: chip antibody

text: wild type

characteristic: genotype

text: Mus musculus

text: Total thymocytes, WT, KAP1 ChIP

text: C57BL/6 / sv129sv

characteristic: strain/background


characteristic: External Id

text: live

text: Generic

text: T cell progenitors

text: RBCC (KAP1 amino acids 20-418)

text: T cell-specific Kap1 knockout

text: Mus musculus

text: Total thymocytes, KAP1 KO, KAP1 ChIP

text: C57BL/6 / sv129sv


characteristic: INSDC center name

text: live

text: Generic

text: T cell progenitors

text: Mus musculus

text: Total thymocytes, input

text: C57BL/6 / sv129sv

text: Input DNA, rep1


characteristic: INSDC first public

text: live

text: Generic

text: Diagenode

characteristic: antibody vendor

text: T cell progenitors

text: wild type

text: Mus musculus

text: Total thymocytes, WT, H3K9me3 ChIP

text: C57BL/6 / sv129sv


text: live

text: Generic

text: Diagenode

text: T cell progenitors

characteristic: cell type

text: T cell-specific Kap1 knockout

text: Mus musculus

text: Total thymocytes, KAP1 KO, H3K9me3 ChIP

text: C57BL/6 / sv129sv


text: live

text: Generic

text: T cell progenitors

text: Mus musculus

characteristic: organism

text: Total thymocytes, input

text: C57BL/6 / sv129sv

text: Input DNA, rep2


text: New Mexico State University

text: live

text: Generic

text: Heterotrophic bacteria from a hospital source wastewater recovered from MHA media containing ciprofloxacin at 8 µg/mL.

characteristic: description

text: Bacteria

text: Wastewater bacteria from a treatment plant in Las Cruces, NM, USA

characteristic: title


text: New Mexico State University

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: Heterotrophic bacteria from a hospital source wastewater recovered from MHA media with no antibiotics (control sample).

text: Bacteria


text: The Ohio State University

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 14 after pollination (DAP)

characteristic: age

text: P1 polyclonal antibodies (alphaP1344)

characteristic: chip antibody information

text: Dr. Erich Grotewold and Dr. Kengo Morohash

characteristic: chip antibody provider

text: PMID 20059741

characteristic: chip antibody reference

text: P-rr (P1 expressed)

characteristic: genotype/variation

text: Zea mays

text: Pericarp at 14DAP of P1-rr

text: Pericarp

characteristic: tissue


characteristic: External Id

text: The Ohio State University

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: 14 after pollination (DAP)

text: P1 polyclonal antibodies (alphaP1344)

characteristic: chip antibody

text: PMID 20059741

text: P-ww (P1 not expressed)

text: Zea mays

text: Pericarp at 14DAP of P1-ww

text: Pericarp


text: New Mexico State University

characteristic: INSDC first public

text: live

text: Generic

text: Heterotrophic bacteria from a hospital source wastewater recovered from MHA media containing doxycycline at 16 µg/mL.

characteristic: description

text: Bacteria

characteristic: organism


text: New Mexico State University

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: Heterotrophic bacteria from a hospital source wastewater recovered from MHA media containing erythromycin at 64 µg/mL.

text: Bacteria

characteristic: title


text: New Mexico State University

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Heterotrophic bacteria from an industrial source wastewater recovered from MHA media containing cefaclor at 16 µg/mL.

text: Bacteria


text: New Mexico State University

text: live

text: Generic

text: Heterotrophic bacteria from an industrial source wastewater recovered from MHA media containing ciprofloxacin at 8 µg/mL.

text: Bacteria


text: New Mexico State University

text: live

text: Generic

text: Heterotrophic bacteria from an industrial source wastewater recovered from MHA media with no antibiotics (control sample).

text: Bacteria


text: New Mexico State University

text: live

text: Generic

text: Heterotrophic bacteria from an industrial source wastewater recovered from MHA media containing doxycycline at 16 µg/mL.

text: Bacteria


text: New Mexico State University

text: live

text: Generic

text: Heterotrophic bacteria from an industrial source wastewater recovered from MHA media containing erythromycin at 64 µg/mL.

text: Bacteria


text: New Mexico State University

text: live

text: Generic

text: Heterotrophic bacteria from a residential source wastewater recovered from MHA media containing cefaclor at 16 µg/mL.

text: Bacteria


text: New Mexico State University

text: live

text: Generic

text: Heterotrophic bacteria from a residential source wastewater recovered from MHA media containing ciprofloxacin at 8 µg/mL.

text: Bacteria


text: New Mexico State University

text: live

text: Generic

text: Heterotrophic bacteria from a residential source wastewater recovered from MHA media with no antibiotics (control sample).

text: Bacteria


text: New Mexico State University

text: live

text: Generic

text: Heterotrophic bacteria from a residential source wastewater recovered from MHA media containing doxycycline at 16 µg/mL.

text: Bacteria


text: New Mexico State University

text: live

text: Generic

text: Heterotrophic bacteria from a residential source wastewater recovered from MHA media containing erythromycin at 64 µg/mL.

text: Bacteria


Withania 101 Leaf

text: National Botanical Research Institute

text: live

text: Generic

text: Withania somnifera

text: Transcriptome analysis of leaf and root tissues of Withania somnifera (Indian ginseng) using 454-Sequencing Platform


text: New Mexico State University

text: live

text: Generic

text: Heterotrophic bacteria of wastewater influent recovered from MHA media containing cefaclor at 16 µg/mL.

text: Bacteria


text: New Mexico State University

text: live

text: Generic

text: Heterotrophic bacteria of wastewater influent recovered from MHA media containing ciprofloxacin at 8 µg/mL.

text: Bacteria

text: Wastewater bacteria from a treatment plant in Las Cruces, NM, USA


text: New Mexico State University

text: live

text: Generic

text: Heterotrophic bacteria of wastewater influent recovered from MHA media with no antibiotics (control sample).

text: Bacteria


text: New Mexico State University

text: live

text: Generic

text: Heterotrophic bacteria of wastewater influent recovered from MHA media containing doxycycline at 16 µg/mL.

text: Bacteria


Camellia sinensis RNA-Seq HZ

text: Institute of Plant Physiology and Ecology

text: live

text: Generic

text: Camellia sinensis

text: Transcriptome study of Camellia sinensis in cold acclimation


text: New Mexico State University

text: live

text: Generic

text: Heterotrophic bacteria of wastewater influent recovered from MHA media containing erythromycin at 64 µg/mL.

text: Bacteria


text: New Mexico State University

text: live

text: Generic

text: Heterotrophic bacteria of wastewater final effluent recovered from MHA media containing cefaclor at 16 µg/mL.

text: Bacteria


text: New Mexico State University

text: live

text: Generic

text: Heterotrophic bacteria of wastewater final effluent recovered from MHA media containing ciprofloxacin at 8 µg/mL.

text: Bacteria


text: New Mexico State University

text: live

text: Generic

text: Heterotrophic bacteria of wastewater final effluent recovered from MHA media with no antibiotics (control sample).

text: Bacteria


text: New Mexico State University

text: live

text: Generic

text: Heterotrophic bacteria of wastewater final effluent recovered from MHA media containing doxycycline at 16 µg/mL.

text: Bacteria


text: New Mexico State University

text: live

text: Generic

text: Heterotrophic bacteria of wastewater final effluent recovered from MHA media containing erythromycin at 64 µg/mL.

text: Bacteria


text: New Mexico State University

text: live

text: Generic

text: Heterotrophic bacteria of wastewater final effluent recovered from R2A media containing cefaclor at 16 µg/mL.

text: Bacteria


text: New Mexico State University

text: live

text: Generic

text: Heterotrophic bacteria of wastewater final effluent recovered from R2A media containing ciprofloxacin at 8 µg/mL.

text: Bacteria


text: New Mexico State University

text: live

text: Generic

text: Heterotrophic bacteria of wastewater final effluent recovered from R2A media with no antibiotics (control sample).

text: Bacteria


text: New Mexico State University

text: live

text: Generic

text: Heterotrophic bacteria of wastewater final effluent recovered from R2A media containing doxycycline at 16 µg/mL.

text: Bacteria


text: New Mexico State University

text: live

text: Generic

text: Heterotrophic bacteria of wastewater final effluent recovered from R2A media containing erythromycin at 64 µg/mL.

text: Bacteria


text: Uppsala University

text: live

text: Generic

text: Ostrich samples from Sahlins struts, Borlange, Sweden. Preserved brain and liver tissues in RNAlater (Qiagen, Hilden, Germany). This sample contains pooled RNA from male liver tissue, individual: 13, 15 and 16

text: Struthio camelus

text: Absence of dosage compensation and the arrested stage of sex chromosome evolution in ostriches: LM2


text: Institute for Genome Sciences University of MD School of Medicine

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

characteristic: day

text: human gut metagenome

text: human gut metagenome 174S_10

text: Unvaccinated

characteristic: vaccine treatment

characteristic: volunteer id


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: antibody

text: rabbit polyclonal. Antibody Target: H3K27ac

characteristic: antibody antibodydescription

text: Histone H3 (acetyl K27). As with H3K9ac, associated with transcriptional initiation and open chromatin structure. It remains unknown whether acetylation has can have different consequences depending on the specific lysine residue targeted. In general, though, there appears to be high redundancy. Histone acetylation is notable for susceptibility to small molecules and drugs that target histone deacetylases.

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Abcam

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

characteristic: cell

text: colorectal carcinoma (PMID: 7214343)

characteristic: cell description

text: cancer

characteristic: cell karyotype

text: endoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: M

characteristic: cell sex

text: UCDavis

characteristic: control

text: Input library was prepared at UC Davis.

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: USC

characteristic: lab

text: Farnham - University of Southern California

characteristic: lab description

text: Homo sapiens

characteristic: replicate

text: No special treatment or protocol applies

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

characteristic: antibody antibodydescription

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Abcam

characteristic: antibody vendorname

text: ATCC

text: mammary gland, adenocarcinoma. (PMID: 4357757), newly promoted to tier 2: not in 2011 analysis

text: cancer

text: ectoderm

text: human

text: F

text: UCDavis

text: Input library was prepared at UC Davis.

text: ChipSeq

text: Chromatin IP Sequencing

text: USC

text: Homo sapiens

characteristic: organism

characteristic: title


text: ENCODE DCC

text: live

text: Generic

text: Input

text: Control signal which may be subtracted from experimental raw signal before peaks are called.

characteristic: antibody description

text: ATCC

characteristic: biomaterial provider

characteristic: cell

text: colorectal carcinoma (PMID: 7214343)

characteristic: cell description

text: cancer

characteristic: cell karyotype

text: endoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: M

characteristic: cell sex

text: UCDavis

characteristic: control

text: Input library was prepared at UC Davis.

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: USC

characteristic: lab

characteristic: lab description

text: Homo sapiens

characteristic: replicate

text: USC_ChipSeq_HCT-116_Input_UCDavis (superseded by GSE86662)

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Rabbit monoclonal antibody. Antibody Target: H3K4me3

characteristic: antibody antibodydescription

text: Histone H3 (tri-methyl K4) marks promoters in chromatin regions

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Cell Signaling

characteristic: antibody vendorname

text: ATCC

text: pancreatic carcinoma, (PMID: 1140870) PANC-1 was established from a pancreatic carcinoma, which was extracted via pancreatico-duodenectomy specimen from a 56-year-old Caucasian individual. Malignancy of this cell line was verified via in vitro and in vivo assays.

text: cancer

text: endoderm

text: human

text: M

text: UCDavis

text: Input library was prepared at UC Davis.

text: ChipSeq

text: Chromatin IP Sequencing

text: USC

text: Homo sapiens

characteristic: organism

characteristic: title


text: ENCODE DCC

text: live

text: Generic

text: rabbit polyclonal, ChIP grade. Antibody Target: H3K9me3

text: Histone H3 (tri methyl K9). Is associated with repressive heterochromatic state (silenced chromatin). NOTE CONTRAST to H3K9me1 which is associated with active and accessible regions.

text: Abcam

text: ATCC

characteristic: biomaterial provider

text: immortalized cell line

characteristic: biomaterial type

characteristic: cell description

text: cancer

characteristic: cell karyotype

text: ectoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: F

characteristic: cell sex

text: UCDavis

characteristic: control

text: Input library was prepared at UC Davis.

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: USC

characteristic: lab

characteristic: lab description

characteristic: line

text: Homo sapiens

characteristic: replicate

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: rabbit polyclonal. Antibody Target: H3K4me1

characteristic: antibody antibodydescription

text: Histone H3 (mono methyl K4). Is associated with enhancers, and downstream of transcription starts.

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Abcam

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

characteristic: cell

text: colorectal carcinoma (PMID: 7214343)

text: cancer

text: endoderm

text: human

text: M

text: UCDavis

text: Input library was prepared at UC Davis.

text: ChipSeq

text: Chromatin IP Sequencing

text: USC

text: Homo sapiens

characteristic: organism

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

text: live

text: Generic

text: Input

characteristic: antibody description

text: ATCC

characteristic: cell description

text: cancer

characteristic: cell karyotype

text: ectoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: F

characteristic: cell sex

text: UCDavis

characteristic: control

text: Input library was prepared at UC Davis.

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: USC

characteristic: lab

characteristic: lab description

text: remapped from hg18, MCF7 cells stably expressed a tagged HA-E2F1 were fragmented using Bioruptor, crosslinks were reversed at 67*C overnight and Input was Qiagen purified, PeakSeq 1.0 (fdr 0.001)

characteristic: labversion

text: Homo sapiens

characteristic: replicate

characteristic: treatment description


Paired end Hiseq Illumina Reads

characteristic: External Id

text: UNC Charlotte

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Samples were derived from Filtered next generations reads from Hiseq Illumina run. Paired end reads were filtered for duplicates, quality scores, adapter contamination and vector contamination. 5 lanes of mated pairs were generated (200 BP insert size).

characteristic: description

text: Vaccinium corymbosum

characteristic: organism

text: Filtered Hiseq reads for blueberry

characteristic: title


text: Institute for Genome Sciences University of MD School of Medicine

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

characteristic: day

text: human gut metagenome

text: human gut metagenome 174S_14

text: Unvaccinated

characteristic: vaccine treatment

characteristic: volunteer id


text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 174S_2

text: Unvaccinated


text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 174S_28

text: Unvaccinated


text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 174S_4

text: Unvaccinated


text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 174S_42

text: Unvaccinated


LNCaP

text: Wenzhou Medical college

text: live

text: Generic

text: Prostate cancer is one of the most common malignancies endangering the elderly men. Extensive research on LNCaP progression cell model has advanced our understanding on the generation of lethal phenotype, which involve the androgen independent and metastasis on prostate cancer. However, the molecular mechanism mediated the production of lethal phenotype still needed further exploration. Here, we performed RNA-Seq to characterize genome-wide expression patterns and alternative splicing events between androgen dependent LNCaP and independent LNCaP-AI-F.

text: Homo sapiens

text: androgen dependent LNCaP


text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 174S_7

text: Unvaccinated


LNCaP-AI-F

text: Wenzhou Medical college

text: live

text: Generic

text: Homo sapiens

text: androgen independent LNCaP-AI-F


text: Institute for Genomics and Systems Biology, University of Chicago

text: live

text: Generic

text: anti-Trl (antii-GAF)

characteristic: antibody

text: Embryo, 8-16hr

characteristic: developmental stage

text: Drosophila melanogaster

text: 8-16hr embryo ChIP; Iso1 strain; GAF antibody

characteristic: strain

text: Whole embryo

characteristic: tissue

text: GAF embryo ChIP, replicate1


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: anti-Trl (antii-GAF)

text: Embryo, 8-16hr

text: Drosophila melanogaster

text: Whole embryo

text: GAF embryo ChIP, replicate2


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: anti-Trl (antii-GAF)

text: Embryo, 8-16hr

text: Drosophila melanogaster

text: Whole embryo

text: GAF embryo ChIP, replicate3


text: live

text: Generic

characteristic: SRA accession

text: anti-Yki

text: Embryo, 8-16hr

text: Drosophila melanogaster

characteristic: organism

text: 8-16hr embryo ChIP; Iso1 strain; Yki antibody

text: Whole embryo

text: Yki embryo ChIP, replicate1

characteristic: title


text: live

text: Generic

text: anti-Yki

text: Embryo, 8-16hr

text: Drosophila melanogaster

text: Whole embryo

text: Yki embryo ChIP, replicate2


text: live

text: Generic

text: anti-Yki

text: Embryo, 8-16hr

text: Drosophila melanogaster

text: Whole embryo

text: Yki embryo ChIP, replicate3


text: live

text: Generic

text: Embryo, 8-16hr

text: Drosophila melanogaster

text: 8-16hr embryo ChIP; Iso1 strain; H3K4me3 antibody

text: Whole embryo

text: H3K4me3 embryo ChIP, replicate1


text: live

text: Generic

text: Embryo, 8-16hr

text: Drosophila melanogaster

text: Whole embryo

text: H3K4me3 embryo ChIP, replicate2


text: live

text: Generic

text: Embryo, 8-16hr

text: Drosophila melanogaster

text: 8-16hr embryo Input chromatin; Iso1 strain; no antibody

text: Whole embryo

text: Embryo input


text: live

text: Generic

text: anti-Trl (antii-GAF)

text: Drosophila melanogaster

text: Wing imaginal disc ChIP; Iso1 strain; GAF antibody

text: Wing imaginal disc

text: GAF wing disc ChIP, replicate1


text: live

text: Generic

text: anti-Trl (antii-GAF)

text: Drosophila melanogaster

text: Wing imaginal disc

text: GAF wing disc ChIP, replicate2


text: live

text: Generic

text: anti-Yki

text: Drosophila melanogaster

text: Wing imaginal disc ChIP; Iso1 strain; Yki antibody

text: Wing imaginal disc

text: Yki wing disc ChIP, replicate1


text: live

text: Generic

text: Drosophila melanogaster

text: Wing imaginal disc Input chromatin; Iso1 strain; no antibody

text: Wing imaginal disc

text: Wing disc input, replicate1


text: live

text: Generic

text: Drosophila melanogaster

text: Wing imaginal disc

text: Wing disc input, replicate2


text: live

text: Generic

text: Generic

characteristic: biosamplemodel

characteristic: day

text: human gut metagenome

text: human gut metagenome 174S_S

text: Unvaccinated

characteristic: vaccine treatment


text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 177S_0

text: Unvaccinated

characteristic: volunteer id


text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 177S_10

text: Unvaccinated


text: Duke-NUS postgraduate medical school

text: live

text: Generic

text: Homo sapiens

text: Normal sample from gastric cancer patient 970010


text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 177S_14

text: Unvaccinated


text: Duke-NUS postgraduate medical school

text: live

text: Generic

text: Homo sapiens

text: normal sample from gastric cancer patient 990172


text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 177S_2

text: Unvaccinated


text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 177S_28

text: Unvaccinated


text: ETH Zurich

text: live

text: Generic

text: none (input)

characteristic: antibody

characteristic: cell line

text: Drosophila melanogaster

text: DRSC-S2 cell line


characteristic: External Id

text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 177S_4

text: Unvaccinated


characteristic: INSDC center name

text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 177S_S

text: Unvaccinated


characteristic: INSDC first public

text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 196S_0

text: Unvaccinated


characteristic: INSDC last update

text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 177S_42

text: Unvaccinated


characteristic: INSDC secondary accession

text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 177S_7

text: Unvaccinated


text: live

characteristic: INSDC status

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 196S_10

text: Unvaccinated


text: live

text: Generic

characteristic: NCBI submission model

text: Generic

text: human gut metagenome

text: human gut metagenome 196S_14

text: Unvaccinated


text: live

text: Generic

characteristic: NCBI submission package

text: Generic

text: human gut metagenome

text: human gut metagenome 177S_56

text: Unvaccinated


text: live

text: Generic

characteristic: SRA accession

text: Generic

text: human gut metagenome

text: human gut metagenome 196S_2

text: Unvaccinated


text: live

text: Generic

text: Generic

text: human gut metagenome

characteristic: organism

text: human gut metagenome 196S_28

text: Unvaccinated


text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 196S_4

characteristic: title

text: Unvaccinated


text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: human gut metagenome

text: human gut metagenome 196S_42

text: Unvaccinated


text: Duke-NUS postgraduate medical school

text: live

text: Generic

text: Homo sapiens

text: normal sample from gastric cancer patient 98748381


text: Dr. Sheng Zhong, Bioengineering, University of California San Diego

text: live

text: Generic

text: anti-methylcytidine

text: Eurogentec

characteristic: antibody manufacturer

text: mouse embryonic stem cells (E14)

characteristic: cell type

text: Day 4

characteristic: development stage

characteristic: genetic background

text: Mus musculus

text: mouse embryonic stem cells (E14)

text: E14 day4 MeDIP-seq

text: activin

characteristic: treatment


characteristic: External Id

text: live

text: Generic

text: anti-methylcytidine

characteristic: antibody

text: Eurogentec

text: mouse embryonic stem cells (E14)

text: Day 6

text: Mus musculus

text: mouse embryonic stem cells (E14)

text: E14 day6 MeDIP-seq

text: activin


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: mouse embryonic stem cells (E14)

text: Day 4

text: Mus musculus

text: mouse embryonic stem cells (E14)

text: E14 day4 MRE-seq

text: activin


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: mouse embryonic stem cells (E14)

text: Day 6

text: Mus musculus

text: mouse embryonic stem cells (E14)

text: E14 day6 MRE-seq

text: activin


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: mouse embryonic stem cells (E14)

text: Day 0

text: Mus musculus

text: mouse embryonic stem cells (E14)

text: E14 day0 5-hmC ChIP-seq

text: activin


text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: mouse embryonic stem cells (E14)

text: Day 4

text: Mus musculus

text: mouse embryonic stem cells (E14)

text: E14 day4 5-hmC ChIP-seq

text: activin


text: live

text: Generic

text: mouse embryonic stem cells (E14)

text: Day 6

text: Mus musculus

characteristic: organism

text: mouse embryonic stem cells (E14)

text: E14 day6 5-hmC ChIP-seq

characteristic: title

text: activin


text: live

text: Generic

text: mouse embryonic stem cells (E14)

text: Day 0

text: Mus musculus

text: mouse embryonic stem cells (E14)

text: E14 day0 ncRNA-seq

text: activin


text: live

text: Generic

text: mouse embryonic stem cells (E14)

text: Day 4

text: Mus musculus

text: mouse embryonic stem cells (E14)

text: E14 day4 ncRNA-seq

text: activin


text: live

text: Generic

text: mouse embryonic stem cells (E14)

text: Day 6

text: Mus musculus

text: mouse embryonic stem cells (E14)

text: E14 day6 ncRNA-seq

text: activin


text: live

text: Generic

text: Generic

characteristic: biosamplemodel

characteristic: day

text: human gut metagenome

text: human gut metagenome 196S_56

text: Unvaccinated

characteristic: vaccine treatment

characteristic: volunteer id


text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 198S_10

text: Unvaccinated


text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 198S_0

text: Unvaccinated


text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 196S_S

text: Unvaccinated


text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 198S_14

text: Unvaccinated


text: Biological Sciences, University of Nebraska - Lincoln

text: live

text: Generic

characteristic: genetic background

text: wild type

characteristic: genotype

text: Arabidopsis thaliana

text: flowers and flower buds

text: flowers and flower buds

characteristic: tissue

text: Wild type flower Rep1


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: Arabidopsis thaliana

text: flowers and flower buds

text: flowers and flower buds

text: tgh-1 flower Rep1


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: wild type

text: Arabidopsis thaliana

text: flowers and flower buds

text: flowers and flower buds

text: Wild type flower Rep2


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Arabidopsis thaliana

text: flowers and flower buds

text: flowers and flower buds

text: tgh-1 flower Rep2


text: Duke-NUS postgraduate medical school

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Homo sapiens

text: normal sample from gastric cancer patient 990475


text: Duke-NUS postgraduate medical school

text: live

text: Generic

characteristic: SRA accession

text: Homo sapiens

characteristic: organism

text: normal sample from gastric cancer patient 31231321


text: Institute for Genome Sciences University of MD School of Medicine

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: human gut metagenome

text: human gut metagenome 198S_2

characteristic: title

text: Unvaccinated


text: live

text: Generic

text: Generic

characteristic: day

text: human gut metagenome

text: human gut metagenome 198S_28

text: Unvaccinated

characteristic: vaccine treatment


text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 198S_4

text: Unvaccinated

characteristic: volunteer id


text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 198S_42

text: Unvaccinated


text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 198S_56

text: Unvaccinated


text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 198S_7

text: Unvaccinated


text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 198S_S

text: Unvaccinated


text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 47S_0

text: One-dose Ty21a


text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 196S_7

text: Unvaccinated


text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 47S_10

text: One-dose Ty21a


text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 49S_28

text: One-dose Ty21a


text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 49S_7

text: One-dose Ty21a


text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 48S_0

text: Four-dose Ty21a


text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 48S_7

text: Four-dose Ty21a


text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 49S_42

text: One-dose Ty21a


text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 49S_56

text: One-dose Ty21a


text: live

text: Generic

text: Generic

text: human gut metagenome

text: human gut metagenome 49S_4

text: One-dose Ty21a