characteristic: External Id

text: Plant Industry, CSIRO

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: L1 microvine

characteristic: cultivar

text: pre-veraison

characteristic: development stage

text: Vitis vinifera

text: grape berries

text: deseeded berries

characteristic: tissue


status: PUBLIC

text: Plant Industry, CSIRO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: L1 microvine

tag: attribute

text: post-veraison

text: Vitis vinifera

characteristic: organism

text: grape berries

text: deseeded berries

characteristic: title


text: Broad Institute

text: live

text: Wangiella dermatitidis NIH8656

characteristic: Isolate, name or label

text: Generic

text: Generic

characteristic: biosamplemodel

text: Exophiala dermatitidis NIH/UT8656

text: Wangiella dermatitidis NIH8656_pH6_2

characteristic: sample name

text: Homo sapiens

characteristic: specific host

text: NIH 8656

characteristic: strain

text: Generic sample from Exophiala dermatitidis NIH/UT8656


characteristic: External Id

text: Broad Institute

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Wangiella dermatitidis NIH8656

text: Generic

text: Generic

text: Exophiala dermatitidis NIH/UT8656

text: Wangiella dermatitidis NIH8656_pH6_1

text: Homo sapiens

text: NIH 8656


text: Broad Institute

text: live

text: Wangiella dermatitidis NIH8656

text: Generic

characteristic: NCBI submission model

text: Generic

text: Exophiala dermatitidis NIH/UT8656

text: Wangiella dermatitidis NIH8656_pH6_3

text: Homo sapiens

text: NIH 8656


text: Broad Institute

text: live

text: Wangiella dermatitidis NIH8656

text: Generic

text: Generic

text: Exophiala dermatitidis NIH/UT8656

text: Wangiella dermatitidis NIH8656_pH2.5_2

text: Homo sapiens

text: NIH 8656


text: Broad Institute

text: live

text: Wangiella dermatitidis NIH8656

text: Generic

text: Generic

text: Exophiala dermatitidis NIH/UT8656

text: Wangiella dermatitidis NIH8656_pH2.5_3

text: Homo sapiens

text: NIH 8656


text: Broad Institute

text: live

text: Wangiella dermatitidis NIH8656

text: Generic

text: Generic

text: Exophiala dermatitidis NIH/UT8656

text: Wangiella dermatitidis NIH8656_pH2.5_1

text: Homo sapiens

text: NIH 8656


text: University of Texas

text: live

text: February

text: Generic

text: Generic

text: Trachymyrmex septentionalis outside worker

characteristic: description

characteristic: nest id

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: February

text: Generic

text: Generic

text: Leucoagaricus sp. symbiont of T.septentrionalis (garden)

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

characteristic: INSDC secondary accession

text: live

text: February

text: Generic

characteristic: NCBI submission package

text: Generic

text: soil excavate near Trachymyrmex septentionalis nest

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: February

text: Generic

characteristic: SRA accession

text: Generic

text: chamber soil from Trachymyrmex septentionalis nest

text: ant fungus garden metagenome

characteristic: organism

text: ant fungus garden metagenome


text: University of Texas

text: live

text: February

text: Generic

text: Generic

text: Trachymyrmex septentionalis garden worker

text: ant fungus garden metagenome

text: ant fungus garden metagenome

characteristic: title


text: University of Texas

text: live

text: March

text: Generic

text: Generic

characteristic: biosamplemodel

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: March

text: Generic

text: Generic

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: March

text: Generic

text: Generic

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: March

text: Generic

text: Generic

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: March

text: Generic

text: Generic

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: April

text: Generic

text: Generic

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: April

text: Generic

text: Generic

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: April

text: Generic

text: Generic

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: April

text: Generic

text: Generic

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: April

text: Generic

text: Generic

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: May

text: Generic

text: Generic

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: May

text: Generic

text: Generic

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: May

text: Generic

text: Generic

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: May

text: Generic

text: Generic

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: May

text: Generic

text: Generic

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: June

text: Generic

text: Generic

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: June

text: Generic

text: Generic

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: June

text: Generic

text: Generic

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: June

text: Generic

text: Generic

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: June

text: Generic

text: Generic

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: June

text: Generic

text: Generic

text: Trachymyrmex septentionalis reproductive female (alate)

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: June

text: Generic

text: Generic

text: Trachymyrmex septentionalis reproductive male

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: July

text: Generic

text: Generic

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: July

text: Generic

text: Generic

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: July

text: Generic

text: Generic

text: Pheidole sp. found near T.septentrionalis nest

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: July

text: Generic

text: Generic

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: July

text: Generic

text: Generic

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: July

text: Generic

text: Generic

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: July

text: Generic

text: Generic

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: July

text: Generic

text: Generic

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: August

text: Generic

text: Generic

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: August

text: Generic

text: Generic

text: Trachymyrmex septentionalis reproductive female (dealate)

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: August

text: Generic

text: Generic

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: August

text: Generic

text: Generic

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: August

text: Generic

text: Generic

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: August

text: Generic

text: Generic

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: University of Texas

text: live

text: August

text: Generic

text: Generic

text: ant fungus garden metagenome

text: ant fungus garden metagenome


text: Embrapa Recursos Geneticos e Biotecnologia

text: live

text: Generic

text: As part of the Genolyptus Project, Xylem was collected by scraping the exposed vascular tissue after the removal of the 0.5-1 cm-tick stem bark from 4-year-old E. globulus trees located in commercial plantations of Aracruz Celulose S.A. (Barra do Ribeiro, RS, Brazil). Total RNA was extracted from 100-200 mg of tissues previously pulverized in mortars with pestles and liquid nitrogen using the PureLink Plant RNA Reagent Kit (Invitrogen) according to the multi-miniprep protocol instructions of the manufacturer. Polyadenylated RNA was subsequently purified from total RNA using the Oligotex mRNA Mini kit (Qiagen). RNA purity and quality were checked by both agarose gel electrophoresis and spectrophotometric measurements at 260 and 280 nm. Complementary DNA libraries were constructed using 1-5 µg mRNA and kits of the Superscript Plasmid System with Gateway Technology for cDNA Synthesis and Cloning (Invitrogen) and instructions of the manufacturer. Eluted fractions of double-stranded cDNA were stored at -20 oC and further ligated into pSport1 (Invitrogen). Ligated products were transformed into Escherichia coli Electromax DH10B competent cells (Invitrogen) using a Gene Pulser ll Electroporation System (Bio-Rad).

text: Four-year-old adult tree

characteristic: dev-stage

text: Escherichia coli DH10B

characteristic: lab-host

text: Trunk (stem)

characteristic: organ

text: Eucalyptus globulus

text: SaII

text: NotI

text: Xylem vascular tissue, differentiating (EUGL-XY)

text: plasmid

characteristic: vector


characteristic: External Id

text: Katholieke Universiteit Leuven

characteristic: INSDC last update

text: live

text: Generic

text: Dicentrarchus labrax

text: Dicentrarchus labrax SNP EST library


text: Hong Kong University of Science and Technology

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: RAPD-PCR amplicons of multiple induced phages from E. coli strains E1140 and E1728, isolated in intertidal sediment using mitomycin C as an inducing agent as described in Chen et al. (2006). Environmental sample. Country: Hong Kong

text: uncultured phage

text: Induced phages of environmental E. coli_RAPD-PCR amplicons

text: pCRII-TOPO TA cloning vector (Invitrogen, USA)


hESC PAR-CLIP

text: Weill Cornell Medical College

text: live

text: Generic

text: Sequencing data from photoactivatable ribonucleoside-enhanced cross-linking and immunoprecipitation method (PAR-CLIP) (Hafner et al. 2010) in human embryonic stem cells (hESCs). This experiment captured AGO2 binding to mRNAs and thereby identified the full range of microRNA target sites in hESCs.

characteristic: description

text: Homo sapiens

text: Genome-wide identification of microRNA targets in human ES cells reveals a role for miR-302 in modulating BMP response.


text: UT Austin

characteristic: INSDC center name

text: live

text: Generic

text: Bacterial 16S reads isolated from a Halictus ligatus female

text: Halictus ligatus

text: Halictus ligatus female


text: UT Austin

characteristic: INSDC first public

text: live

text: Generic

text: Bacterial 16S reads isolated from a Halictus ligatus pupa.

text: Halictus ligatus

text: H. ligatus pupa


text: UT Austin

characteristic: INSDC secondary accession

text: live

text: Generic

text: Bacterial 16S reads isolated from a Halictus ligatus pupa frass.

text: Halictus ligatus

text: Frass from H. ligatus pupa


text: UT Austin

text: live

text: Generic

characteristic: NCBI submission package

text: Halictus ligatus

text: Halictus ligatus pupa


text: UT Austin

text: live

text: Generic

characteristic: SRA accession

text: Bacterial 16S reads isolated from the frass from a Halictus ligatus pupa.

text: Halictus ligatus

text: Frass from Halictus ligatus pupa


text: UT Austin

text: live

text: Generic

text: Bacterial 16S reads isolated from frass from a Halictus ligatus pupa.

text: Halictus ligatus

characteristic: organism

text: Halictus ligatus frass from pupa


text: UT Austin

text: live

text: Generic

text: Bacterial 16S reads isolated from a Halictus ligatus failed provision.

text: Halictus ligatus

text: Halictus ligatus failed provision

characteristic: title


text: UT Austin

text: live

text: Generic

text: Bacterial 16S reads isolated from a Halictus ligatus pollen provision.

text: Halictus ligatus

text: Halictus ligatus pollen provision


text: UT Austin

text: live

text: Generic

text: Bacterial 16S reads isolated from the tunnels of a Halictus ligatus nest.

text: Halictus ligatus

text: Tunnel from Halictus ligatus nest


text: UT Austin

text: live

text: Generic

text: Halictus ligatus

text: Substrate surrounding Halictus ligatus nest


text: UT Austin

text: live

text: Generic

text: Bacterial 16S reads isolated from an Augochlora pura female.

text: Augochlora pura

text: Augochlora pura female


text: UT Austin

text: live

text: Generic

text: Bacterial 16S reads isolated from an Augochlora pura callow male.

text: Augochlora pura

text: Augochlora pura callow male


text: UT Austin

text: live

text: Generic

text: Augochlora pura

text: Augochlora pura callow male frass


text: UT Austin

text: live

text: Generic

text: Bacterial 16S reads isolated from an Augochlora pura pharate adult.

text: Augochlora pura

text: Augochlora pura pharate adult


text: UT Austin

text: live

text: Generic

text: Bacterial 16S reads isolated from the frass from an Augochlora pura pharate adult.

text: Augochlora pura

text: Augochlora pura pharate adult frass


text: UT Austin

text: live

text: Generic

text: Augochlora pura

text: Augochlora pupa


text: UT Austin

text: live

text: Generic

text: Bacterial 16S reads isolated from the frass from an Augochlora pura pupa.

text: Augochlora pura

text: Augochlora pura pupa frass


text: UT Austin

text: live

text: Generic

text: Bacterial 16S reads isolated from an Augochlora pura nest's surrounding substrate.

text: Augochlora pura

text: Augochlora pura nest substrate


text: UT Austin

text: live

text: Generic

text: Bacterial 16S reads isolated from an Augochlora pura nest's tunnel walls.

text: Augochlora pura

text: Augochlora pura nest tunnel walls


text: Beijing Genome Institute

text: live

text: Generic

characteristic: breed

text: Bos mutus yakQH1

text: Bos mutus

text: Bos mutus


text: Institute of Molecular Biology University of Zurich

text: live

text: Generic

text: rhizosphere metagenome

text: Rice rhizosphere metagenome


text: live

text: Generic

text: ecological metagenomes

text: Rice phyllosphere metagenome


name: SIP 13C wheat - pyrosequencing of gradient fractions

text: Universität Bremen

text: live

text: Generic

text: The soil used for this study was collected in October 2009 from the A horizon of a grassland and a forest in the Biodiversity Exploratory Hainich (Germany}, sieved to 2 mm and stored at 4°C. The grassland (latitude N 51° 6’ 47.5’’, longitude E 10° 26’ 10.3’’) was a fertilized mown pasture (cattle) of stagnosol soil with a pH of 7.2, whereas the forest (latitude N 51° 6’ 10.2’’, longitude E 10° 2’ 3.1’’) was an unmanaged beech forest of luvisol soil with a pH of 5.3. The soil was pre-incubated for 40 days at 15°C in the dark. Microcosms were set up by placing 3 g (dw) of soil into a 100 ml flask. Soil samples were supplemented with sterile water to reach 80% of the maximum water holding capacity. The experiment was started by supplementation of 13C-labelled wheat roots at 5 mg per g (dw) soil. As controls, soil was (i) amended with unlabelled wheat roots or (ii) incubated without any plant material. Each treatment was run in triplicates with static incubation at 20°C in the dark for 168 h. Samples of headspace and soil were removed at different time points of incubation (0, 24, 48, 72, 96 and 168 h) from three flasks of each treatment and soil was stored at -80°C for molecular analysis. Total DNA and RNA were extracted simultaneously from one soil sample (1 g) of each time point using a direct lysis technique. The co-extracted DNA was removed from an aliquot of the RNA by digestion with DNase. Subsequently, RNA was re-extracted and complete removal of DNA from RNA extracts was verified by 16S rRNA gene based PCR using Primers Ba27f (5`-AGAGTTTGATCCTGGCTCAG-3') and Ba907r (5´-CCGTCAATTCCTTTRAGTTT-3´). Total RNA from the treatments was quantified. RNA extracts (500 ng of RNA) of the labelled treatments were mixed with cesium trifluoroacetate. In order to separate the RNA on the basis of the molecular weight, equilibrium density gradient centrifugation was performed using an ultracentrifuge. Gradients of density-resolved RNA were fractionated and the CsTFA buoyant density of each fraction was determined. Nucleic acids were precipitated over night with 3 M sodium acetate and ethanol for subsequent community analysis. To analyze the taxonomic composition of the soil bacterial community in selected density fractions, the V1-V3 region of the 16S rRNA gene (Escherichia coli positions 8 to 536) was chosen for amplification and subsequent pyrosequencing of the PCR products. The V1-V3 region was amplified with the primer set Ba27f and Ba518r containing the Roche 454 pyrosequencing adaptors (Ba27f: 5’-CGTATCGCCTCCCTCGCGCCATCAGAGAGTTTGATCCTGGCTCAG-3’, Ba518r_mod: 5’-CTATGCGCCTTGCCAGCCCGCTCAGCGTATTACCGCGGCTGCTGG-3’) in duplicates. Between the Roche 454 pyrosequencing adaptor and the forward primer, 10-bp-barcodes were added to allow the sorting of each sample from the mixed pyrosequencing outcome. PCR products were pooled and purified, quantification of the PCR products was performed using the Quant-iT dsDNA BR assay kit. Equal amounts of ten barcoded samples were pooled and the sequences of the partial 16S rRNA genes determined by employing the Roche GS-FLX 454 pyrosequencer.

text: Bacteria

text: Identification of soil bacteria assimilating carbon from 13C-labelled wheat residue by RNA-based Stable Isotope Probing


text: UT Austin

text: live

text: Generic

text: Bacterial 16S reads isolated from a social Megalopta genalis female

text: Megalopta genalis

text: Megalopta genalis social female


text: UT Austin

text: live

text: Generic

text: Bacterial 16S reads isolated from a pollen provision from a social nest.

text: Megalopta genalis

text: Megalopta genalis social nest pollen provision


text: UT Austin

text: live

text: Generic

text: Bacterial 16S reads isolated from a Megalopta genalis second instar larva from a social nest.

text: Megalopta genalis

text: Megalopta genalis second instar larva


text: UT Austin

text: live

text: Generic

text: Bacterial 16S reads isolated from pollen from a Megalopta genalis second instar larva from a social nest.

text: Megalopta genalis

text: Megalopt agenalis pollen from second instar larva


text: UT Austin

text: live

text: Generic

text: Bacterial 16S reads isolated from the frass from a Megalopta genalis light-eyed pupa from a social nest.

text: Megalopta genalis

text: Megalopta genalis frass


text: UT Austin

text: live

text: Generic

text: Bacterial 16S reads isolated from the tunnel walls of a Megalopta genalis social nest.

text: Megalopta genalis

text: Megalopta genalis social nest tunnel walls


text: UT Austin

text: live

text: Generic

text: Bacterial 16S reads isolated from the surrounding substrate of a Megalopta genalis social nest.

text: Megalopta genalis

text: Megalopta genalis social nest substrate


text: UT Austin

text: live

text: Generic

text: Bacterial 16S reads isolated from a Megalopta genalis female from a solitary nest.

text: Megalopta genalis

text: Megalopta genalis solitary female


text: UT Austin

text: live

text: Generic

text: Bacterial 16S reads isolated from a Megalopta genalis first instar larva from a solitary nest.

text: Megalopta genalis


text: UT Austin

text: live

text: Generic

text: Bacterial 16S reads isolated from the pollen provision of a Megalopta genalis first instar larva from a solitary nest.

text: Megalopta genalis

text: Megalopta genalis pollen first instar larva


text: UT Austin

text: live

text: Generic

text: Bacterial 16S reads isolated from a Megalopta genalis post defecating larva from a solitary nest.

text: Megalopta genalis

text: Megalopta genalis post defecating larva


text: UT Austin

text: live

text: Generic

text: Bacterial 16S reads isolated from the frass of a Megalopta genalis post-defecating larva from a solitary nest.

text: Megalopta genalis

text: Megalopta genalis frass


text: UT Austin

text: live

text: Generic

text: Bacterial 16S reads isolated from the tunnel walls of a Megalopta genalis solitary nest.

text: Megalopta genalis

text: Megalopta genalis nest tunnel walls


text: UT Austin

text: live

text: Generic

text: Bacterial 16S reads isolated from thesurrounding substrate of a Megalopta genalis solitary nest.

text: Megalopta genalis

text: Megalopta genalis nest substrate


text: Functional Genetics, Department Medical Biochemistry and Microbiology, Uppsala University

text: live

text: Generic

text: C2C12 myoblast

characteristic: cell type

characteristic: chip antibody

text: Mus musculus

characteristic: passages

text: C2C12 myoblast

characteristic: strain


characteristic: External Id

text: live

text: Generic

text: C2C12 myotube

text: Mus musculus

text: C2C12 myotube


text: Yale university

characteristic: INSDC last update

text: live

text: Generic

text: E. coli K-12 MG1655 grown in LB to OD600 of 0.6.

text: Escherichia coli str. K-12 substr. MG1655

text: e.coli LB directional transcriptome


sal

text: Yale university

text: live

characteristic: INSDC status

text: Generic

text: Salmonella enterica sv Typhimurium 14028s grown in LB to OD600 of 0.6.

text: Salmonella enterica subsp. enterica serovar Typhimurium

text: Salmonella Typhimurium 14028s directional transcriptome


text: Genome Institute of Singapore

text: live

text: Generic

characteristic: NCBI submission model

text: PPMX

characteristic: antibody vendor

characteristic: cell line

text: monocytic cells

text: anti-PPARg

text: Homo sapiens

text: THP-1, PPARg ChIP-Seq

text: differentiation with PMA (50ng/ml;40hrs)

characteristic: treatment 1

text: 1.5 h of 1microM Rosiglitazone

characteristic: treatment 2


text: Genome Institute of Singapore

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

text: Santa Cruz

text: monocytic cells

text: anti-pan-RXR

text: Homo sapiens

text: THP-1, RXR ChIP-Seq

text: 1.5 h of 1microM Rosiglitazone


text: Genome Institute of Singapore

text: live

text: Generic

characteristic: SRA accession

text: Santa Cruz

text: monocytic cells

text: Homo sapiens

characteristic: organism

text: THP-1, PU.1 ChIP-Seq

characteristic: title

text: 1.5 h of 1microM Rosiglitazone


text: Genome Institute of Singapore

text: live

text: Generic

text: Santa Cruz

text: monocytic cells

characteristic: cell type

text: normal mouse IgG

characteristic: chip antibody

text: Homo sapiens

text: THP-1, control ChIP-Seq

text: 1.5 h of 1microM Rosiglitazone


characteristic: External Id

text: Myles Brown, Medical Oncology, Dana-Farber Cancer Institute

text: live

text: Generic

text: LNCaP

text: prostate cancer cells

text: Homo sapiens

characteristic: passages

text: DNase-seq

characteristic: sample type

text: prostate cancer cells

text: LNCaP vehicle DNaseI

text: ethanol

characteristic: treatment


characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: LNCaP

text: prostate cancer cells

text: Homo sapiens

text: DNase-seq

text: prostate cancer cells

text: LNCaP DHT DNaseI

text: DHT


text: live

text: Generic

characteristic: cell line

text: breast cancer cells

text: Homo sapiens

text: DNase-seq

text: breast cancer cells

text: MCF-7 vehicle DNaseI

text: ethanol


characteristic: INSDC center name

text: live

text: Generic

text: breast cancer cells

text: Homo sapiens

text: DNase-seq

text: breast cancer cells

text: MCF-7 E2 DNaseI

text: DHT


characteristic: INSDC first public

text: live

text: Generic

text: breast cancer cells

text: Millipore

characteristic: chip antibody manufacturer

text: Homo sapiens

text: Chromatin IP against H3K4me2

text: breast cancer cells

text: MCF-7 vehicle H3K4me2

text: ethanol


characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

text: breast cancer cells

text: Millipore

text: Homo sapiens

text: Chromatin IP against H3K4me2

text: breast cancer cells

text: MCF-7 E2 H3K4me2


text: Cancer Science Institute of Singapore, National University of Singapore

text: live

text: Generic

characteristic: SRA accession

text: Homo sapiens

characteristic: organism

characteristic: rip antibody

text: HL60 Cell lines

text: DNMT1 RIPSeq HL60

text: Abcam

characteristic: vendor


characteristic: External Id

text: live

text: Generic

text: Homo sapiens

text: IgG

text: HL60 Cell lines

text: IgG RIPSeq HL60

characteristic: title

text: Sigma Aldrich


name: Caenorhabditis elegans dauer exit daf-2(el370) RNA sample 3-1

text: University of Washington Genome Sciences

text: live

text: Generic

text: Dauer worms (91 hrs after culturing at 25degC) shifted to 15degC to allow recovery from dauer for 12hrs to a point at which ~24% worms are resistant to 1% SDS treatment. Illumina sequencing of C. elegans dauer exit daf-2(el370) sample 3-1 DauerExitDAF2-3-1 polyA+ RNAseq random fragment library This sample is available through the modENCODE DCC (www.modencode.org) as: DauerExitDAF2-3-1 Local library name: DauerExitDAF2-3-1 Quality values are ASCII encoded Phred + 33.

characteristic: description

text: Caenorhabditis elegans


name: Caenorhabditis elegans dauer entry daf-2(el370) RNA sample 1-1

text: live

text: Generic

text: Synchronized L1 worms were cultured at 25degC for 48 hrs to a point at which 50% worms are resistant to 1% SDS treatment (Dauer assay). Illumina sequencing of C. elegans dauer entry daf-2(el370) sample 1-1 DauerEntryDAF2-1-1 polyA+ RNAseq random fragment library This sample is available through the modENCODE DCC (www.modencode.org) as: DauerEntryDAF2-1-1 Local library name: DauerEntryDAF2-1-1 Quality values are ASCII encoded Phred + 33.

text: Caenorhabditis elegans


name: Caenorhabditis elegans dauer entry daf-2(el370) RNA sample 4-1

text: live

text: Generic

text: Synchronized L1 worms were cultured at 25degC for 48 hrs to a point at which 50% worms are resistant to 1% SDS treatment (Dauer assay). Illumina sequencing of C. elegans dauer entry daf-2(el370) sample 4-1 DauerEntryDAF2-4-1 polyA+ RNAseq random fragment library This sample is available through the modENCODE DCC (www.modencode.org) as: DauerEntryDAF2-4-1 Local library name: DauerEntryDAF2-4-1 Quality values are ASCII encoded Phred + 33.

text: Caenorhabditis elegans


name: Caenorhabditis elegans dauer exit daf-2(el370) RNA sample 6-1

text: live

text: Generic

text: Dauer worms (91 hrs after culturing at 25degC) shifted to 15degC to allow recovery from dauer for 12hrs to a point at which ~24% worms are resistant to 1% SDS treatment. Illumina sequencing of C. elegans dauer exit daf-2(el370) sample 6-1 DauerExitDAF2-6-1 polyA+ RNAseq random fragment library This sample is available through the modENCODE DCC (www.modencode.org) as: DauerExitDAF2-6-1 Local library name: DauerExitDAF2-6-1 Quality values are ASCII encoded Phred + 33.

text: Caenorhabditis elegans


text: live

text: Generic

text: MspI

characteristic: digestion

text: Homo sapiens

text: HL60 Cell lines

text: RRBS HL60 rep1

text: bisulfite

characteristic: treatment


characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: MspI

text: Homo sapiens

text: HL60 Cell lines

text: RRBS HL60 rep2

text: bisulfite


text: NNRL, ITMB, NEI

text: live

text: Generic

characteristic: NCBI submission model

text: post natal day 21

characteristic: age

text: wild type

characteristic: genotype

text: Mus musculus

text: Retina

characteristic: strain

text: Retina

characteristic: tissue


text: NNRL, ITMB, NEI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

text: post natal day 21

text: Nrl-/-

text: Mus musculus

text: Retina

text: Retina


text: Genetics and Developmental Biology, University of Connecticut Health Center

text: live

text: Generic

characteristic: SRA accession

text: Cultured organisms

characteristic: cell

text: Pyrococcus furiosus DSM 3638

characteristic: organism

text: Cultured organisms

text: DSM 3638

text: type strain of Pyrococcus furiosus

characteristic: type material


characteristic: External Id

text: Jiming Jiang, UW-Madison

text: live

text: Generic

text: Nipponbare

characteristic: cultivar

text: Oryza sativa Japonica Group

text: Seedling

text: Seedling

characteristic: title


text: Jiming Jiang, UW-Madison

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: Nipponbare

text: Oryza sativa Japonica Group

text: Callus

text: Callus


text: university of shiraz, college of agriculture

text: live

text: Generic

characteristic: NCBI submission model

text: azad variety

text: seedling

characteristic: dev-stage

text: Cicer arietinum

text: self polination

characteristic: sex

text: leaves and stems

characteristic: tissue-type

text: chickpea leaves and stems exposed to cold acclimation library


text: Wayne State University

characteristic: INSDC center name

text: live

text: Generic

text: Constructed from breast cancer cell lines including MCF-7, DCIS, SKBR, T47D, SUM44, SUM102, SUM149, and SUM159

characteristic: description

text: Homo sapiens

text: Human T7 cDNA library from eight breast cancer cell lines


text: Central Institute of Brackishwater Aquaculture

characteristic: INSDC first public

text: live

text: Generic

text: The suppression subtractive hybridization cDNA library was constructed from immunomodulated Macrobrachium rosenbergii using MrNV recombinant capsid protein. Total RNA was isolated from hepatopancreas of normal and immunomodulated prawn. The mRNAs were further purified, reverse transcribed and subjected to suppression subtractive hybridization. The subtracted cDNAs were cloned into the pGEM-T Easy vector and transformed into E.coli DH5alpha.

text: sub adult (intermolt)

text: Escherichia coli DH5alpha

characteristic: lab-host

text: hepatopancreas

characteristic: organ

text: Macrobrachium rosenbergii

text: SSH cDNA library from immunomodulated Macrobrachium rosenbergii using MrNV recombinant capsid protein

text: pGEM-T

characteristic: vector


text: Department of Botany and Plant Sciences, University of California, Riverside

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: accession

text: Sorghum bicolor

characteristic: organism

text: seedlings

text: control

characteristic: stress

text: seedlings

characteristic: tissue


characteristic: External Id

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Sorghum bicolor

text: seedlings

text: drought

text: seedlings

characteristic: title


characteristic: INSDC center name

text: live

text: Generic

text: Sorghum bicolor

text: seedlings

text: cold

text: seedlings


characteristic: INSDC first public

text: live

text: Generic

text: Sorghum bicolor

text: seedlings

text: salt

text: seedlings


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Xanthoria parietina 46-1-SA22

characteristic: description

text: Xanthoria parietina 46-1-SA22

characteristic: strain

text: Generic sample from Xanthoria parietina 46-1-SA22


RW

text: Fudan University

text: live

text: Generic

text: Sample was collected in drinking water treatment plant in winter. Water sample was pre-filtered through 8 um filter and then filtered through 0.45 filter.

text: Bacteria

text: raw water in drinking water treatment process


day2 ZBED6 silencing

text: Uppsala University

text: live

text: Generic

text: Transcriptome sequencing of murine C2C12 cells 48 hours following siRNA silencing of ZBED6

text: Mus musculus


day2 NC silencing

text: Uppsala University

text: live

text: Generic

text: Mus musculus

text: day2 NC silencing


day4 ZBED6 silencing

text: Uppsala University

text: live

text: Generic

text: Mus musculus

text: day2 ZBED6 silencing


day4 NC silencing

text: Uppsala University

text: live

text: Generic

text: Mus musculus

text: day4 NC silencing


text: Laboratory of Gene Regulation, Singapore Immunology Network

text: live

text: Generic

text: CD4+ T cells

characteristic: cell type

text: BRD4 (Abcam; Cat no. ab46199; Lot no. 613288)

characteristic: chip antibody

text: Homo sapiens

text: CD4+ T cells

text: untreated

characteristic: treatment


characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: CD4+ T cells

text: Homo sapiens

text: CD4+ T cells

text: JQ1 treated


text: live

text: Generic

text: CD4+ T cells

text: PolII4H8 (Abcam; Cat no. ab5408; Lot no. 722997)

text: Homo sapiens

characteristic: organism

text: CD4+ T cells

text: JQ1 treated


text: live

text: Generic

text: CD4+ T cells

text: PolIISer2 (Abcam; Cat no. ab5095; Lot no. 782031)

text: Homo sapiens

text: CD4+ T cells

text: JQ1 treated


text: live

text: Generic

text: Embryonic Stem Cells

text: Homo sapiens

text: Embryonic Stem Cells

text: untreated


text: live

text: Generic

text: CD4+ T cells

text: Homo sapiens

text: CD4+ T cells


text: University of Nebraska - Non Human Primate Genomics Center

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: RNA was extracted from a Chinese origin rhesus macaque in the laboratory of Dr. Howard Fox. Sequencing was performed at the University of Nebraska Medical Center.

characteristic: individual id

text: Macaca mulatta

text: caudate

characteristic: tissue type

text: Rhesus macaque Animal Number (002T-NHP), Caudate


characteristic: External Id

text: UC Berkeley

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: mine drainage metagenome

text: Richmond Mine C75 location June 2006 biofilm sample


text: UC Berkeley

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

text: mine drainage metagenome

text: Richmond Mine C75 location August 2006 biofilm sample

characteristic: title


text: UC Berkeley

characteristic: INSDC first public

text: live

text: Generic

text: mine drainage metagenome

text: Richmond Mine C75 location November 2006 biofilm sample


text: UC Berkeley

text: live

text: Generic

text: mine drainage metagenome

text: Richmond Mine C75 location May 2007 biofilm sample


text: UC Berkeley

text: live

text: Generic

text: mine drainage metagenome

text: Richmond Mine C75 location August 2007 biofilm sample


text: UC Berkeley

text: live

text: Generic

text: mine drainage metagenome

text: Richmond Mine C75 location November 2007 biofilm sample


text: UC Berkeley

text: live

text: Generic

text: mine drainage metagenome

text: Richmond Mine C75 location June 2008 biofilm sample spatial sample V1


text: UC Berkeley

text: live

text: Generic

text: mine drainage metagenome

text: Richmond Mine C75 location June 2008 biofilm sample spatial sample V2


text: UC Berkeley

text: live

text: Generic

text: mine drainage metagenome

text: Richmond Mine C75 location June 2008 biofilm sample spatial sample V3


text: UC Berkeley

text: live

text: Generic

text: mine drainage metagenome

text: Richmond Mine C75 location October 2008 biofilm sample spatial sample V3


text: UC Berkeley

text: live

text: Generic

text: mine drainage metagenome

text: Richmond Mine C75 location September 2010 biofilm sample


text: UC Berkeley

text: live

text: Generic

text: mine drainage metagenome

text: Richmond Mine C75 location November 2010 biofilm sample


text: UC Berkeley

text: live

text: Generic

text: mine drainage metagenome

text: Richmond Mine C75 location December 2010 biofilm sample


text: UC Berkeley

text: live

text: Generic

text: mine drainage metagenome

text: Richmond Mine C10 location August 2006 biofilm sample


text: UC Berkeley

text: live

text: Generic

text: mine drainage metagenome

text: Richmond Mine C10 location November 2006 biofilm sample


text: UC Berkeley

text: live

text: Generic

text: mine drainage metagenome

text: Richmond Mine C10 location August 2007 biofilm sample


text: UC Berkeley

text: live

text: Generic

text: mine drainage metagenome

text: Richmond Mine AB20 location June 2006 biofilm sample Developmental Stage 0.1


text: UC Berkeley

text: live

text: Generic

text: mine drainage metagenome

text: Richmond Mine AB20 location June 2006 biofilm sample Developmental Stage 1


text: UC Berkeley

text: live

text: Generic

text: mine drainage metagenome

text: Richmond Mine AB20 location June 2006 biofilm sample Developmental Stage 2


text: UC Berkeley

text: live

text: Generic

text: mine drainage metagenome

text: Richmond Mine AB20 location June 2006 biofilm sample Developmental Stage 3


text: UC Berkeley

text: live

text: Generic

text: mine drainage metagenome

text: Richmond Mine ABmuck location May 2007 biofilm sample


text: UC Berkeley

text: live

text: Generic

text: mine drainage metagenome

text: Richmond Mine ABmuck location August 2007 biofilm sample


text: Centre for Genomic Sciences, The University of Hong Kong

text: live

text: Generic

text: Homo sapiens

text: non-tumor

characteristic: phenotype

text: liver tissue, non-tumor

text: liver

characteristic: tissue


text: live

text: Generic

text: Homo sapiens

text: hepatocellular carcinoma

text: liver tissue, cancerous

text: liver


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Mountain Pine Beetle lodgepole beetle community

characteristic: description

text: beetle metagenome

text: ACACGacgggcggtgtgtRc

characteristic: primer

text: Canada

characteristic: sample location

text: Generic sample from beetle metagenome


characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Mountain Pine Beetle hybrid gallery community

text: beetle metagenome

text: ACGTCacgggcggtgtgtRc

text: Canada

text: Generic sample from beetle metagenome


text: live

text: Generic

text: Mountain Pine Beetle lodgepole gallery community

text: beetle metagenome

characteristic: organism

text: AGTGTacgggcggtgtgtRc

text: Canada

text: Generic sample from beetle metagenome


text: live

text: Generic

text: Mountain Pine Beetle hybrid community

text: beetle metagenome

text: TGTAGacgggcggtgtgtRc

text: Canada

text: Generic sample from beetle metagenome


text: live

text: Generic

text: Southern Pine Beetle Beetle

text: beetle metagenome

text: AGCACacgggcggtgtgtRc

text: Unavailable

text: Generic sample from beetle metagenome


text: live

text: Generic

text: Southern Pine Beetle fungus gallery

text: beetle metagenome

text: ATGCTacgggcggtgtgtRc

text: Unavailable

text: Generic sample from beetle metagenome


text: live

text: Generic

text: Sirex Wood Wasp adult (A)

text: wasp metagenome

text: CTACTacgggcggtgtgtRc

text: Pennsylvania

text: Generic sample from wasp metagenome


text: live

text: Generic

text: Sirex Wood Wasp Larvae (A)

text: wasp metagenome

text: CTCGCacgggcggtgtgtRc

text: Pennsylvania

text: Generic sample from wasp metagenome


text: live

text: Generic

text: Sirex Wood Wasp adult (B)

text: wasp metagenome

text: TAGAGacgggcggtgtgtRc

text: Pennsylvania

text: Generic sample from wasp metagenome


text: live

text: Generic

text: Sirex Wood Wasp Larvae (B)

text: wasp metagenome

text: TCATCacgggcggtgtgtRc

text: Pennsylvania

text: Generic sample from wasp metagenome


text: live

text: Generic

text: Fungus-growing termite fungus garden (A)

text: termite metagenome

text: TCTCGacgggcggtgtgtRc

text: South Africa

text: Generic sample from termite metagenome


text: live

text: Generic

text: Fungus-growing termite workers (A)

text: termite metagenome

text: TCTGCacgggcggtgtgtRc

text: South Africa

text: Generic sample from termite metagenome


text: live

text: Generic

text: Fungus-growing termite workers (B)

text: termite metagenome

text: TGCATacgggcggtgtgtRc

text: South Africa

text: Generic sample from termite metagenome


text: live

text: Generic

text: Fungus-growing termite fungus garden (B)

text: termite metagenome

text: TGCGCacgggcggtgtgtRc

text: South Africa

text: Generic sample from termite metagenome


text: live

text: Generic

text: Atta texana Internal Dump Top

text: ant metagenome

text: TGCTGacgggcggtgtgtRc

text: Unavailable

text: Generic sample from ant metagenome


text: live

text: Generic

text: Atta texana Internal Dump Bottom

text: ant metagenome

text: TCTATacgggcggtgtgtRc

text: Unavailable

text: Generic sample from ant metagenome


bb

text: University of Oregon

text: live

text: Generic

text: Saskatchewan: 54N, 106W

text: Wyeomyia smithii

text: Generic sample from Wyeomyia smithii


bc

text: University of Oregon

text: live

text: Generic

text: Florida: 31N, 86W

text: Wyeomyia smithii

text: Generic sample from Wyeomyia smithii


br

text: University of Oregon

text: live

text: Generic

text: New Jersey: 40N, 74W

text: Wyeomyia smithii

text: Generic sample from Wyeomyia smithii


cb

text: University of Oregon

text: live

text: Generic

text: North Carolina: 35N, 83W

text: Wyeomyia smithii

text: Generic sample from Wyeomyia smithii


ci

text: University of Oregon

text: live

text: Generic

text: Alabama: 31N, 88W

text: Wyeomyia smithii

text: Generic sample from Wyeomyia smithii


cl

text: University of Oregon

text: live

text: Generic

text: Saskatchewan: 54N, 113W

text: Wyeomyia smithii

text: Generic sample from Wyeomyia smithii


cm

text: University of Oregon

text: live

text: Generic

text: Nova Scotia: 46N, 60W

text: Wyeomyia smithii

text: Generic sample from Wyeomyia smithii


cp

text: University of Oregon

text: live

text: Generic

text: Wyeomyia smithii

text: Generic sample from Wyeomyia smithii


cr

text: University of Oregon

text: live

text: Generic

text: Florida: 31N, 87W

text: Wyeomyia smithii

text: Generic sample from Wyeomyia smithii


ev

text: University of Oregon

text: live

text: Generic

text: Manitoba: 53N, 99W

text: Wyeomyia smithii

text: Generic sample from Wyeomyia smithii


ew

text: University of Oregon

text: live

text: Generic

text: North Carolina: 35N, 79W

text: Wyeomyia smithii

text: Generic sample from Wyeomyia smithii


fc

text: University of Oregon

text: live

text: Generic

text: Manitoba: 54N, 101W

text: Wyeomyia smithii

text: Generic sample from Wyeomyia smithii


fv

text: University of Oregon

text: live

text: Generic

text: Massachussetts: 43N, 72W

text: Wyeomyia smithii

text: Generic sample from Wyeomyia smithii


gb

text: University of Oregon

text: live

text: Generic

text: Wyeomyia smithii

text: Generic sample from Wyeomyia smithii


gm

text: University of Oregon

text: live

text: Generic

text: Newfoundland: 50N, 58W

text: Wyeomyia smithii

text: Generic sample from Wyeomyia smithii


lb

text: University of Oregon

text: live

text: Generic

text: Quebec: 46N, 74W

text: Wyeomyia smithii

text: Generic sample from Wyeomyia smithii


lp

text: University of Oregon

text: live

text: Generic

text: Maryland: 39N, 77W

text: Wyeomyia smithii

text: Generic sample from Wyeomyia smithii


nf

text: University of Oregon

text: live

text: Generic

text: Newfoundland: 49N, 58W

text: Wyeomyia smithii

text: Generic sample from Wyeomyia smithii


ns

text: University of Oregon

text: live

text: Generic

text: Nova Scotia: 46N, 61W

text: Wyeomyia smithii

text: Generic sample from Wyeomyia smithii


pp

text: University of Oregon

text: live

text: Generic

text: New Jersey: 40N, 75W

text: Wyeomyia smithii

text: Generic sample from Wyeomyia smithii


rc

text: University of Oregon

text: live

text: Generic

text: Wisconsin: 43N, 89W

text: Wyeomyia smithii

text: Generic sample from Wyeomyia smithii


sd

text: University of Oregon

text: live

text: Generic

text: Quebec: 46N, 74W

text: Wyeomyia smithii

text: Generic sample from Wyeomyia smithii


sf

text: University of Oregon

text: live

text: Generic

text: North Carolina: 35N, 83W

text: Wyeomyia smithii

text: Generic sample from Wyeomyia smithii


tb

text: University of Oregon

text: live

text: Generic

text: Manitoba: 53N, 101W

text: Wyeomyia smithii

text: Generic sample from Wyeomyia smithii


tv

text: University of Oregon

text: live

text: Generic

text: Pennsylvania: 41N, 75N

text: Wyeomyia smithii

text: Generic sample from Wyeomyia smithii


we

text: University of Oregon

text: live

text: Generic

text: North Carolina: 35N, 79W

text: Wyeomyia smithii

text: Generic sample from Wyeomyia smithii


Wmit

text: University of Oregon

text: live

text: Generic

text: Florida: 26N, 81W

text: Wyeomyia mitchellii

text: Generic sample from Wyeomyia mitchellii


Wvan

text: University of Oregon

text: live

text: Generic

text: Florida: 26N, 81W

text: Wyeomyia vanduzeei

text: Generic sample from Wyeomyia vanduzeei


text: J. Craig Venter Institute

text: live

text: Generic

text: Esophageal adenocarcinoma (EA)

text: human metagenome

text: Generic sample from human metagenome


cantons

text: Stowers Institute

text: live

text: Generic

text: Canton S Parental strain

text: Drosophila melanogaster

text: Parental Canton S


text: Stowers Institute

text: live

text: Generic

text: Parental white-1118 strain

text: Drosophila melanogaster

text: Parental white-1118 strain


TCM samples

text: Centre for Comparative Genomics

text: live

text: Generic

text: Twenty-eight TCM samples were obtained from the Australian Customs and Border Protection Service (ACBPS) after being seized at airports and seaports across Australia. The was DNA extracted and quantified via real-time quantitative polymerase chain reaction using plant chloroplast trnL g/h and mitochondrial 16S ribosomal RNA (rRNA) primers. Fusion primers with unique 6bp MID tags were designed for both the 16S mitochondrial (~150bp product for 16Smam, ~250bp product for 16S 1/2 degenerate primers and chloroplast trnL c/h genes

text: Mammalia

text: TCM metagenomic sample


text: Unidad Mixta Universidad Valencia-CSISP

text: live

text: Generic

text: PCR product of external fraction

text: human gut metagenome


text: Unidad Mixta Universidad Valencia-CSISP

text: live

text: Generic

text: PCR product of internal fraction

text: human gut metagenome


text: Unidad Mixta Universidad Valencia-CSISP

text: live

text: Generic

text: PCR product of faeces from pregnant woman

text: human gut metagenome


text: Unidad Mixta Universidad Valencia-CSISP

text: live

text: Generic

text: PCR product of meconium

text: human gut metagenome


text: Unidad Mixta Universidad Valencia-CSISP

text: live

text: Generic

text: PCR product of faeces from child (1 week)

text: human gut metagenome


text: Unidad Mixta Universidad Valencia-CSISP

text: live

text: Generic

text: PCR product of faeces from child (1 month)

text: human gut metagenome


text: Unidad Mixta Universidad Valencia-CSISP

text: live

text: Generic

text: PCR product of faeces from child (3 month)

text: human gut metagenome


text: Unidad Mixta Universidad Valencia-CSISP

text: live

text: Generic

text: PCR product of faeces from child (7 month)

text: human gut metagenome


text: J. Craig Venter Institute

text: live

text: Generic

text: Barrett's Esophagus (BE)(long segment)

text: human metagenome

text: Generic sample from human metagenome


text: Biology, Brandeis University

text: live

text: Generic

text: TTAA

characteristic: barcode

text: Caenorhabditis elegans

text: N2 wildtype control adults

text: control adults

characteristic: stage

text: N2 wildtype

characteristic: strain

text: Control adult#1 sRNA library


characteristic: External Id

text: Biology, Brandeis University

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: GGAA

text: Caenorhabditis elegans

text: N2 wildtype postdauer adults

text: postdauer adults

text: N2 wildtype

text: Postdauer adult#1 sRNA library


text: Biology, Brandeis University

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

text: AAAA

text: Caenorhabditis elegans

text: N2 wildtype control adults

text: control adults

text: N2 wildtype

text: Control adult#2 sRNA library

characteristic: title


text: Biology, Brandeis University

characteristic: INSDC first public

text: live

text: Generic

text: CCAA

text: Caenorhabditis elegans

text: N2 wildtype postdauer adults

text: postdauer adults

text: N2 wildtype

text: Postdauer adult#2 sRNA library


text: Biology, Brandeis University

text: live

text: Generic

text: AAAA

text: Caenorhabditis elegans

text: N2 wildtype Larval L3 stage

text: larval L3

text: N2 wildtype

text: Larval L3 sRNA library


text: Biology, Brandeis University

text: live

text: Generic

text: CCAA

text: Caenorhabditis elegans

text: N2 wildtype dauer stage

text: dauer

text: N2 wildtype

text: Dauer sRNA library


text: Weill Cornell

text: live

text: Generic

text: Homo sapiens

text: Paired-end exome sequence Q1_1


text: Weill Cornell

text: live

text: Generic

text: Homo sapiens

text: Paired-end exome sequence Q1_2


text: Weill Cornell

text: live

text: Generic

text: Homo sapiens

text: Paired-end exome sequence Q1_3


text: Weill Cornell

text: live

text: Generic

text: Homo sapiens

text: Paired-end exome sequence Q2_1


text: Weill Cornell

text: live

text: Generic

text: Homo sapiens

text: Paired-end exome sequence Q2_2


text: Weill Cornell

text: live

text: Generic

text: Homo sapiens

text: Paired-end exome sequence Q3_1


text: Weill Cornell

text: live

text: Generic

text: Homo sapiens

text: Paired-end exome sequence Q3_2


Arabidopsis normalized cDNA library

text: MUW

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: wild type Arabidopsis thaliana (Col-0) flowers of different stages and 10 day old seedlings grown at 22*C, 60% of humidity, light intensity of 150 *mol m-2 s-1 and 16h light/8h dark cycle.

characteristic: description

text: Columbia; Col-0

characteristic: ecotype

text: Arabidopsis thaliana

text: pool: flowers and 10 day seedlings

characteristic: tissue type

text: Arabidopsis thaliana Col-0


text: US Department of Agriculture. Agricultural Research Service

text: live

text: Generic

characteristic: NCBI submission package

text: urediniospores

characteristic: cell type

text: Total RNA was isolated from germinated urediniospores and from appressoria of P. pachyrhizi isolate TW72-1 by phenol:chloroform extraction. Purification of poly(A)+ mRNA, synthesis of cDNA, and library construction was performed by SeqWright (Houston, TX) following standard protocols for library construction via suppression subtractive hybridization. The cDNA from germinated urediniospores was subtracted from cDNA of appressoria. The subtracted-cDNA pool was cloned into pBluescript II KS(+) vector and transformed into DH10B cells.

text: six hours post-germination

characteristic: dev-stage

characteristic: isolate

characteristic: lab-host

text: Phakopsora pachyrhizi

text: EcoRV

text: NotI

text: germinated urediniospores

characteristic: tissue-type

text: Phakopsora pachyrhizi appressoria-enriched library

text: plasmid

text: pBluescript II KS(+) vector

characteristic: vector


characteristic: External Id

text: University of Victoria, Centre for Forest Biology and Department of Biology, Victoria BC, Canada

characteristic: INSDC last update

text: live

text: Generic

text: Rubel

characteristic: cultivar

text: Vaccinium corymbosum

characteristic: organism


text: Institut de Recherche pour le Developpement

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Suppression subtractive hybridization library, Somatic embryos developed on solid media with or without 36-benzylaminopurine (BAP) for one week were used to make two libraries embsomSSHE1 and embsomSSHE2 respectively

text: early

text: Electro ten-blue Stratagene

text: somatic embryos

characteristic: organ

text: Elaeis guineensis

text: Tenera Lab 221

characteristic: strain

text: embsomSSHE1, Early somatic embryos (SSH) BAP/no BAP

characteristic: title

text: plasmid

text: pGEM-T Easy


characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

characteristic: description

text: early

text: Electro ten-blue Stratagene

text: somatic embryos

text: Elaeis guineensis

text: Tenera Lab 221

text: embsomSSHE2, Early somatic embryos2 (SSH) no BAP/BAP

text: plasmid

text: pGEM-T Easy


text: live

text: Generic

text: Suppression subtractive hybridization library, zygotic embryo normalize library

text: maturation

characteristic: dev-stage

text: Electro ten-blue Stratagene

text: zygotic embryos

text: Elaeis guineensis

text: Tenera C1001

text: Emb_ZygSSHZ1, Zygotic Embryos SSH-normalized

text: plasmid

text: pGEM-T Easy


text: HSRC

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: Sesame growth and development analysis with anther transcriptome

text: Sesamum indicum

text: Sesame growth and development trancriptome


sesame 000006

text: HSRC

text: live

text: Generic

text: Sesame growth and development analysis with seedlings and germinating seed transcriptome

text: Sesamum indicum


text: Broad Institute

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: Chrysochloris asiatica

text: Chrysochloris asiatica_28Jun2011

characteristic: sample name

text: Generic sample from Chrysochloris asiatica


characteristic: External Id

text: Broad Institute

characteristic: INSDC last update

text: live

text: Generic

text: Generic

text: Orycteropus afer afer

text: Generic sample from Orycteropus afer afer


sesame 000007

text: HSRC

text: live

text: Generic

text: Sesamum indicum

characteristic: organism


text: Hood, Institute for Systems Biology

characteristic: INSDC center name

text: live

text: Generic

text: Chang Gung Memorial Hospital, Taiwan, ROC

characteristic: biomaterial provider

text: Homo sapiens

text: glioblastoma multiforme

characteristic: phenotype

text: Peripheral brain tissue

characteristic: tissue

text: Peripheral brain tissue


text: Hood, Institute for Systems Biology

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Homo sapiens

text: glioblastoma multiforme

text: Tumor brain tissue

text: Tumor brain tissue


text: University of Bergen

characteristic: INSDC first public

text: live

text: Generic

text: Generic

characteristic: depth

text: 73.566167 8.1585

characteristic: lat lon

text: marine sediment metagenome

text: Gravity Core 12 19 cmbsf

characteristic: title


text: Harvard Medical School

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

text: pool of 44 barcoded libraries from 10 HGDP samples and 1 Dinka sample (DNK02), 4 libraries were prepared per sample. the 6bp barcode is ligated to the 5'end of the sheared DNA (read in the first 6 cycles of the first sequencing read); list of barcodes per sample: HGDP00456 ATGTAG HGDP00456 CTATGA HGDP00456 GGTCGT HGDP00456 TCCTCC HGDP00521 ACAATA HGDP00521 CACCAC HGDP00521 CGTTAT HGDP00521 GATCGG HGDP00542 ATGTGT HGDP00542 CTCAGC HGDP00542 GAGGCA HGDP00542 GGTACG HGDP00665 CCGACG HGDP00665 GCATTC HGDP00665 TAAGGT HGDP00665 TGAGTA HGDP00778 AGGTCG HGDP00778 CCTGTA HGDP00778 GTGAAC HGDP00778 TAACAT HGDP00927 CCGCGT HGDP00927 GCTGCC HGDP00927 TTCATA HGDP00927 TTGGCG HGDP00998 AGCGCA HGDP00998 CCATAG HGDP00998 GTGCCT HGDP00998 TAGATC HGDP01029 AGAAGG HGDP01029 AGGTTC HGDP01029 GCGCTA HGDP01029 TACGAT HGDP01284 ACTGAT HGDP01284 ATACAC HGDP01284 CACTTA HGDP01284 TGTGTG HGDP01307 AATACA HGDP01307 CGACTC HGDP01307 GCTAAG HGDP01307 TTCCAT DNK02 CTGCTG DNK02 GGCGAC DNK02 ACATGT DNK02 TGTCTA

characteristic: description

text: Homo sapiens

text: 10 HGDP samples, 1 Dinka


50 humans

text: Harvard Medical School

text: live

text: Generic

characteristic: SRA accession

text: pool of 50 barcoded libraries from 50 human samples (CEPH-HGDP and CEU HAPMAP). the 6bp barcode is ligated to the 5'end of the sheared DNA (read in the first 6 cycles of the first sequencing read); list of barcodes per sample: HGDP00665 CTCAGC HGDP00666 TCCGGT HGDP00667 TGCAGT HGDP00668 TTCATA HGDP00669 ATACAC HGDP00670 CGTTAT HGDP00671 CTCGGA HGDP00672 TGTGTG HGDP00673 ACCGCG HGDP00674 GATCGG HGDP01062 CTTAGA HGDP01063 GCAGCT HGDP01064 TCCTCC HGDP01065 GAACTA HGDP01066 ACAACC HGDP01067 GGTAAC HGDP01068 GTGGTC HGDP01069 CCGCGT HGDP01070 CTGACA HGDP01072 CCGAAT HGDP00995 TGACCT HGDP00998 CTTATC HGDP00999 GTAGCC HGDP01001 CCATAG HGDP01009 GAGGCA HGDP01010 AATTGA HGDP01012 ACTCAC HGDP01013 AAGTTG HGDP01014 TACGAT HGDP01015 CACCAC NA11891 AGGCGA NA07045 CTCTCG NA12058 GCCTTG NA12045 AGGTTC NA11843 TAGCAG NA12749 CACTGC NA12842 AGTGGC NA12414 ATGTAG NA12777 GGTACG NA12383 TAAGGT NA12340 ACAATA NA12399 ACTGAT NA07347 ATGTGT NA12718 GTGTCC NA12286 TAGAGT NA11920 GCTAAG NA12830 TGGACT NA11930 CACTTA NA12273 CTATTG NA12890 AATACA

text: Homo sapiens

text: Sardinian, Karitiana, CEU


12 E.coli strains

characteristic: External Id

text: Harvard Medical School

text: live

text: Generic

text: one barcoded library each was prepared for 12 modified derivatives of MG1655. bacodes used: AGCGCA TAGATC CCATAG GTGCCT ATACAC TGTGTG ACTGAT CACTTA CTCAGC GAGGCA GGTACG ATGTGT

text: Escherichia coli str. K-12 substr. MG1655

characteristic: strain

text: microbes


text: Joint Genome Institute, U.S. Department of Energy

characteristic: INSDC last update

text: live

text: Generic

text: Bjerkandera adusta HHB-12826-SP SB-22

text: Bjerkandera adusta HHB-12826-SP SB-22

characteristic: organism

text: HHB-12826-SP SB-22

text: Generic sample from Bjerkandera adusta HHB-12826-SP SB-22


text: UNICAMP

characteristic: INSDC center name

text: live

text: Generic

text: sequencing of pool_100 fosmid clones from bacterial sludge. Prospection of genes and pathways related to phenol degradation in metagenomic libraries from petroleum refinery

text: bioreactor sludge metagenome


DWTP

text: Fudan University

text: live

text: Generic

text: traditional coagulation tank

text: Bacteria

text: TC


TC

text: Fudan University

text: live

text: Generic

text: Sample was collected in drinking water treatment plant in winter. Water sample was pre-filtered through 8 um filter and then filtered through 0.45 filter.

text: Bacteria

text: TC


text: Oliver Hobert, Biochemistry, Columbia University

text: live

text: Generic

text: Caenorhabditis elegans

text: FR1gfp-transgenic worms that can mount an RNAi response and should contain viRNAs (positive control)

text: whole organism

text: FR1gfp (positive control)


text: live

text: Generic

text: Caenorhabditis elegans

text: rde-4(-/-) mutants (negative control as no viRNAs are expected to be produced)

text: whole organism

text: rde-4(ne299) (-/-) (negative control)


text: live

text: Generic

text: Caenorhabditis elegans

text: FR1gfp; rde-4(-/-) worms that are two generations away from their rde-4(+/-) grandparents, i.e. worms that can themselves not produce viRNAs, but may have inherited viRNA from their grandparents

text: whole organism

text: F3 FR1gfp; rde-4(ne299)(-/-)


text: live

text: Generic

text: Caenorhabditis elegans

text: F3 progeny of wild-type animals that contained the FR1gfp transgene (and therefore produced viRNAs), but have lost this transgene through outcrossing with non-transgenic wild-type worms

text: whole organism

text: F3 rde-4(ne299)(-/-) (transgene crossed out)


Chlamydia trachomatis D-EC

text: NIAID

text: live

text: Generic

text: Chlamydia trachomatis D-EC

text: Chlamydia trachomatis D-EC

text: D-EC

text: Chlamydia trachomatis D-EC


text: Kaspar, Research, Nationwide Children's Hospital

text: live

text: Generic

characteristic: age

text: dorsal root ganglia (DRG neurons)

characteristic: cell type

text: 16 days in vitro

characteristic: growth

text: Mus musculus

text: dorsal root ganglia (DRG neurons)


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: cerebellar granular neurons (CGNs)

text: 16 hours in vitro

text: Mus musculus

text: cerebellar granular neurons (CGNs)


text: Plant Industry, CSIRO

characteristic: INSDC first public

text: live

text: Generic

text: L1 microvine

characteristic: cultivar

text: pre-veraison

characteristic: development stage

text: Vitis vinifera

text: grape berries

text: deseeded berries

characteristic: tissue


text: Plant Industry, CSIRO

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

text: L1 microvine

text: post-veraison

text: Vitis vinifera

text: grape berries

text: deseeded berries

characteristic: title


characteristic: External Id

text: PacBio

text: live

text: Pathogen.cl

text: Pathogen

characteristic: SRA accession

characteristic: collection date

text: An Escherichia coli strain from the 2011 German outbreak of HUS

characteristic: description

text: Denmark

characteristic: geo loc name

text: stool sample from a 64-year-old woman from Hamburg who presented with bloody diarrhea and did not develop hemolytic uremic syndrome (HUS)

characteristic: isolation-source

text: Escherichia coli O104:H4 str. C227-11

text: Pathogen sample from Escherichia coli O104:H4 str. C227-11

characteristic: project name

characteristic: serovar

text: Homo sapiens

characteristic: specific host

text: Pathogen: clinical or host-associated sample from Escherichia coli O104:H4 str. C227-11


text: Institute for Genome Sciences University of MD School of Medicine

characteristic: INSDC center name

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Generic

characteristic: biosamplemodel

text: Rhinovirus C

characteristic: organism

characteristic: strain

text: Rhinovirus p1013_s2893_1999


characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

text: Generic

text: Rhinovirus C

text: Rhinovirus p1084_s3920_2000

characteristic: title


characteristic: External Id

text: live

text: Generic

characteristic: SRA accession

text: Generic

text: Rhinovirus C

text: Rhinovirus p1259_s2935_1999


text: live

text: Generic

text: Generic

text: Rhinovirus C

text: Rhinovirus p1075_s3911_2000


text: live

text: Generic

text: Generic

text: Rhinovirus A

text: Rhinovirus p1038_sR149_2008


text: live

text: Generic

text: Generic

text: Rhinovirus A

text: Rhinovirus p1177_sR3307_2010


text: live

text: Generic

text: Generic

text: Rhinovirus C

text: Rhinovirus p1195_sR2110_2009


text: live

text: Generic

text: Generic

text: Rhinovirus C

text: Rhinovirus p1163_sR2897_2009


text: live

text: Generic

text: Generic

text: Rhinovirus A

text: Rhinovirus p1171_sR1211_2009


name: Pachycladon fastigiatum mRNA-seq paired-end lane 1

text: Massey University

text: live

text: Generic

text: P. fastigiatum accessions were grown from seed in a greenhouse at Landcare Research Lincoln. Seeds originated from plants collected at Ohau ski field. Tissue samples from young and old leafs as well as roots were harvested and shock frozen in liquid nitrogen.

characteristic: description

text: Pachycladon fastigiatum

text: Pachycladon fastigiatum from Ohau ski field mRNA-seq paired-end lane 3 (roots, young leaves, old leaves)


text: United States Department of Agriculture, Agricultural Research Service

text: live

text: Generic

characteristic: cell-line

text: Lymantria dispar

text: Not I

text: Eco RV

text: Ld652Y_IIBBL_wildtype cDNA Library

text: pExpress 1

characteristic: vector


name: Caenorhabditis elegans dauer daf-2(el370) RNA sample 2-1

text: University of Washington Genome Sciences

text: live

text: Generic

text: Synchronized L1 worms cultured at 25degC for about 91 hrs to a point at which ~100% worms are resistant to 1% SDS treatment. Illumina sequencing of C. elegans dauer daf-2(el370) sample 2-1 DauerDAF2-2-1 polyA+ RNAseq random fragment library This sample is available through the modENCODE DCC (www.modencode.org) as: DauerDAF2-2-1 Local library name: DauerDAF2-2-1 Quality values are ASCII encoded Phred + 33.

text: Caenorhabditis elegans


name: Caenorhabditis elegans dauer daf-2(el370) RNA sample 2

text: live

text: Generic

text: C. elegans N2. Synchronized L1 worms cultured at 25°C for about 91 hrs when there are about 100% worms are resistant to 1% SDS treatment. This sample is available through the modENCODE DCC (www.modencode.org) as: dauer_daf-2_DauerDAF2-2 This sample is a biological replicate for DCC project: dauer_daf-2(e1370)_25dC_91hrs_post-L1 Local library name: DauerDAF2-2 Quality values are ASCII encoded Phred + 33 through GAPipeline1.8.

text: Caenorhabditis elegans


name: Caenorhabditis elegans dauer daf-2(el370) RNA sample 5-1

text: live

text: Generic

text: Synchronized L1 worms cultured at 25degC for about 91 hrs to a point at which ~100% worms are resistant to 1% SDS treatment. Illumina sequencing of C. elegans dauer daf-2(el370) sample 5-1 DauerDAF2-2-5-1 polyA+ RNAseq random fragment library This sample is available through the modENCODE DCC (www.modencode.org) as: DauerDAF2-5-1 Local library name: DauerDAF2-5-1 Quality values are ASCII encoded Phred + 33.

text: Caenorhabditis elegans


name: Caenorhabditis elegans N2 young adult single pass Ribozero/Epicentre

text: live

text: Generic

text: RNA from C. elegans young adult N2 hermaphrodites was processed through a single pass through the Ribozero kit from Epicentre and concentrated by ethanol precipitation prior to sequencing. This is not a polyA+ library. This sample is available through the modENCODE DCC (www.modencode.org) as: N2_YA_RZ-1 Local library name: N2_YA_RZ-1 Quality values are ASCII encoded Phred + 33.

text: Caenorhabditis elegans


name: Caenorhabditis elegans N2 young adult RNA library Yad-1 ribominus

text: live

text: Generic

text: RNA from C. elegans young adult N2 hermaphrodites ribominus Yad-1 sample. This sample is available through the modENCODE DCC (www.modencode.org) as: N2_Yad-1RR Local library name: N2_Yad-1RR Quality values are ASCII encoded Phred + 33.

text: Caenorhabditis elegans


Ld652Y 454 Jr. RNASeq

text: USDA

text: live

text: Generic

text: This is a set of 454 RNASeq reads from wild-type IPLB-Ld652Y cells.

text: Lymantria dispar

text: USDA-ARS IIBBL IPLB-Ld652Y 454 RNASeq


text: henan agricultural university

text: live

text: Generic

characteristic: cultivar

text: Nicotiana tabacum

text: tobacco roots before topping

text: roots

characteristic: tissue

text: MiRNAs in tobacco roots before topping


text: henan agricultural university

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Generic

text: Nicotiana tabacum

text: tobacco roots after topping

text: roots

text: MiRNAs in tobacco roots after topping


text: Broad Institute

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: cell line

text: Homo sapiens

text: HepG2 cells


text: Broad Institute

text: live

text: Generic

text: Homo sapiens

characteristic: organism

text: K562 cells


text: Broad Institute

characteristic: INSDC first public

text: live

text: Generic

text: Escherichia coli

text: plasmid

characteristic: source

text: Plasmid pool


text: Broad Institute

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

characteristic: bi gssr sample id

characteristic: bi gssr sample lsid

text: Genomic DNA

characteristic: bi gssr sample type

text: Generic

characteristic: biosamplemodel

text: Escherichia coli str. K-12 substr. MG1655

text: MG1655 No chl LW1

characteristic: sample id

characteristic: strain

characteristic: substrain

text: E. coli MG1655 Genomic DNA sample 17968.0


characteristic: External Id

text: Plant Industry, CSIRO

characteristic: INSDC center name

text: live

text: Generic

characteristic: SRA accession

characteristic: cultivar

text: inmature, stage 1

characteristic: development stage

text: Vitis vinifera

text: inflorescent structures at position 1 from the apex

text: inflorescence

characteristic: tissue

characteristic: title


text: Plant Industry, CSIRO

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: inmature, stage 2

text: Vitis vinifera

characteristic: organism

text: inflorescent structures at position 2 from the apex

text: inflorescence


text: Plant Industry, CSIRO

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

text: inmature, stage 3

text: Vitis vinifera

text: inflorescent structures at position 3 from the apex

text: inflorescence


text: Plant Industry, CSIRO

text: live

text: Generic

text: inmature, stages 1, 2, 3

text: Vitis vinifera

text: pooled leaf sample from leaves opposite influrensence structures

text: leaf


text: Plant Industry, CSIRO

text: live

text: Generic

text: Pinot Meunier L2

text: inmature, stages 1, 2, 3

text: Vitis vinifera

text: leaf


text: Plant Industry, CSIRO

text: live

text: Generic

text: Pinot Meunier L2

text: inmature, stage 1

text: Vitis vinifera

text: tendril structures at position 1 from the apex

text: tendril


text: Plant Industry, CSIRO

text: live

text: Generic

text: Pinot Meunier L2

text: inmature, stage 2

text: Vitis vinifera

text: tendril structures at position 2 from the apex

text: tendril


text: Plant Industry, CSIRO

text: live

text: Generic

text: Pinot Meunier L2

text: inmature, stage 3

text: Vitis vinifera

text: tendril structures at position 3 from the apex

text: tendril


text: Plant Industry, CSIRO

text: live

text: Generic

text: inmature, stages 1, 2, 3

text: Vitis vinifera

text: pooled leaf ample from leaves opposite influrensence structures

text: leaf


text: Plant Industry, CSIRO

text: live

text: Generic

text: Pinot Meunier L2

text: inmature, stages 1, 2, 3

text: Vitis vinifera

text: leaf


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Setaria italica Yugu

characteristic: description

text: Setaria italica

characteristic: sample number

text: Yugu

text: Generic sample from Setaria italica


text: Sari Agricultural Science and Natural Resources University

text: live

text: Generic

text: tissue-specific cDNA library including root, internode, sheath and shoot at sodium chloride stress (0, 250 mM) were compared using cDNA-AFLP

text: DH5 alpha

characteristic: lab-host

text: Root, internode, sheath and shoot

characteristic: organ

text: Aeluropus littoralis

text: Root, internode, sheath and shoot

characteristic: tissue-type

text: Aeluropos littoralis salt-stressed cDNA-AFLP library

characteristic: vector


name: P. fastigiatum mRNA-seq paired-end lane 1

characteristic: External Id

text: Massey University

characteristic: INSDC center name

text: live

text: Generic

characteristic: SRA accession

text: Pachycladon fastigiatum

text: Cutoffs and k-mers: Implications from a transcriptome study in allopolyploid plants; P. fastigiatum paired-end lane 1


text: Massey University

text: live

text: Generic

text: Seeds of P. cheesemanii were germinated according to Weigel and Glazebrook (2002) and young plants were transferred to potting mix (Orderings Nurseries Potting Mix). Leaves of three biological replicates were harvested and shock frozen in liquid nitrogen after cultivating the plants for 5 months in growth cabinets (Contherm Phytotron Climate Simulator) using the following parameters: 20* C, 50% air humidity, 180 uE PAR (photosynthetically active radiation), and 16h day light.

text: Pachycladon cheesemanii

text: Pachycladon cheesemanii mRNA-seq single-end replicate 3 (leaves)

characteristic: title


text: Massey University

characteristic: INSDC first public

text: live

text: Generic

text: Pachycladon cheesemanii

text: Pachycladon cheesemanii mRNA-seq single-end replicate 2 (leaves)


text: Massey University

characteristic: INSDC last update

text: live

text: Generic

text: Pachycladon cheesemanii

text: Pachycladon cheesemanii mRNA-seq single-end replicate 1 (leaves)


text: University of Colorado Boulder

text: live

characteristic: INSDC status

text: Generic

text: Generic

characteristic: biosamplemodel

text: Bacterial community structure in glucose-fed MEC at 4 degree Celsius

text: GSC:MIMS/MIMARKS

characteristic: keywords

text: bioreactor metagenome

characteristic: temperature


text: University of Colorado Boulder

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Generic

text: Bacterial community structure in glucose-fed MEC at 25 degree Celsius

text: GSC:MIMS/MIMARKS

text: bioreactor metagenome

characteristic: organism


text: DOE Joint Genome Institute

text: live

text: Generic

text: Escherichia coli strain K-12 substrain MG1655

characteristic: description

characteristic: strain

characteristic: substrain

text: Generic sample from Escherichia coli str. K-12 substr. MG1655


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: antibody

text: Mouse monoclonal IgG raised against human recombinant GATA-3. Antibody Target: GATA3

characteristic: antibody antibodydescription

text: This gene encodes a protein which belongs to the GATA family of transcription factors. The protein contains two GATA-type zinc fingers and is a n important regulator of T-cell development and plays an important role in endothelial cell biology. Defects in this gene are the cause of hypoparathyroidism with sensorineural deafness and renal dysplasia (provided by RefSeq).

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotech

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

characteristic: cell

text: mammary gland, adenocarcinoma. (PMID: 4357757), newly promoted to tier 2: not in 2011 analysis

characteristic: cell description

text: cancer

characteristic: cell karyotype

text: ectoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: F

characteristic: cell sex

text: UCDavis

characteristic: control

text: Input library was prepared at UC Davis.

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: USC

characteristic: lab

text: Farnham - University of Southern California

characteristic: lab description

text: Homo sapiens

characteristic: replicate

text: tier 1

characteristic: replicate description

text: USC_ChipSeq_MCF-7_GATA3_(SC-268)_UCDavis

text: No special treatment or protocol applies

characteristic: treatment description


characteristic: External Id

text: Howard Chang, Dermatology, Stanford University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: cell line

text: MDA-231 cell line overexpressing human HOTAIR with EZH2 knocked down

characteristic: cell type

text: HOTAIR

characteristic: lincrna probes

text: Homo sapiens

characteristic: organism

characteristic: title


text: Penninger, IMBA

text: live

text: Generic

text: haploid mouse ES cells

text: Mus musculus

text: reFlipROSAß-Geo(Cre)

characteristic: retrovirus used

characteristic: selection

text: haploid mouse ES cells

text: sampling retroviral library

characteristic: transfection batch


characteristic: External Id

text: Penninger, IMBA

text: live

text: Generic

text: haploid mouse ES cells

text: Mus musculus

text: reFlipROSAß-Geo(Cre)

text: ricinus communis

text: haploid mouse ES cells

text: sequencing ricinus screen inversions


text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Homo sapiens

text: Tumor vs. Matched-Normal

characteristic: study design

text: Acute Lymphoblastic Leukemia

characteristic: study disease

text: Whole Genome Sequencing of Infant ALL

characteristic: study name

text: Yes

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: DNA sample from a human participant in the dbGaP study Whole Genome Sequencing of Infant ALL


text: University of Oklahoma

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Generic

characteristic: biosamplemodel

text: Processing Facility Separator

characteristic: description

text: B

text: oil production facility metagenome

characteristic: organism

text: oil production facility metagenome


characteristic: External Id

text: University of Oklahoma

characteristic: INSDC center name

text: live

text: Generic

text: Generic

text: Pig Envelope

text: B

text: oil production facility metagenome

text: oil production facility metagenome

characteristic: title


text: University of Oklahoma

text: live

text: Generic

text: Generic

text: Seawater/Production Water

text: B

text: oil production facility metagenome

text: oil production facility metagenome


text: University of Oklahoma

text: live

text: Generic

text: Generic

text: Seawater

text: B

text: oil production facility metagenome

text: oil production facility metagenome


text: University of Oklahoma

text: live

text: Generic

text: Generic

text: Water Injector

text: B

text: oil production facility metagenome

text: oil production facility metagenome


text: University of Oklahoma

text: live

text: Generic

text: Generic

text: Production Well

text: B

text: oil production facility metagenome

text: oil production facility metagenome


text: University of Oklahoma

text: live

text: Generic

text: Generic

text: Processing Facility Separator

text: A

text: oil production facility metagenome

text: oil production facility metagenome


text: University of Oklahoma

text: live

text: Generic

text: Generic

text: Surface Water

text: A

text: oil production facility metagenome

text: oil production facility metagenome


text: University of Oklahoma

text: live

text: Generic

text: Generic

text: Seawater/Production Water

text: A

text: oil production facility metagenome

text: oil production facility metagenome


text: University of Oklahoma

text: live

text: Generic

text: Generic

text: Dead Leg

text: A

text: oil production facility metagenome

text: oil production facility metagenome


text: University of Oklahoma

text: live

text: Generic

text: Generic

text: Production Well

text: A

text: oil production facility metagenome

text: oil production facility metagenome


text: Forestry and Forest Products Research Institute

text: live

text: Generic

text: early stage

characteristic: dev-stage

text: Cryptomeria japonica

text: male strobilus

characteristic: tissue-type

text: Male strobilus SSH-cDNA Library (early stage)


text: live

text: Generic

text: tetrad stage

text: Cryptomeria japonica

text: male strobilus

text: Male strobilus SSH-cDNA Library (tetrad stage)


text: live

text: Generic

text: mature stage

text: Cryptomeria japonica

text: male strobilus

text: Male strobilus SSH-cDNA Library (mature stage)


text: Zhejiang University

text: live

text: Generic

text: uncultured organism

text: deep-sea sediment metagenomic library

text: fosmid

characteristic: vector


text: Okinawa Institute of Science and Technology (OIST)

text: live

text: Generic

text: Acropora digitifera

text: Acropora digitifera DNA (Chuya Shinzato)


control

text: Unversity of Washington

text: live

text: Generic

text: Control seawater collected at Ocean Station Papa (OSP; 50 N, 145 W) from a depth of 10m and incubated for 98 hrs. Poly-A selected mRNA. Harvested on June 13, 2008.

text: metagenomes

text: Ocean Station Papa seawater control incubation


COCO

text: LNCC

text: live

text: Generic

text: soil metagenome

text: COCO


PAC

text: LNCC

text: live

text: Generic

text: soil metagenome

text: PAC


text: Nouria Hernandez, CIG, University of Lausanne

text: live

text: Generic

characteristic: chip antibody

text: CS377, raised against the C-terminus of RPC1, peptide PKRPLIFDTNEFHIPLVT, see (Sepehri and Hernandez 1997)),

characteristic: chip antibody catalog number

text: Made in our lab

characteristic: chip antibody manufacturer

text: Mus musculus

text: Mouse liver cells

characteristic: strain

text: liver

characteristic: tissue


characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: CS681, raised against the C-terminus of RPC4, peptide CSPDFESLLDHKHR (same peptide as CS682, see (Chong, Hu et al. 2001))

text: Made in our lab

text: Mus musculus

text: Mouse liver cells

text: liver


text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: chiip antibody lot/batch

text: Abcam

text: Mus musculus

characteristic: organism

text: Mouse liver cells

text: liver


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: Santa Cruz Biotechnology

text: Mus musculus

text: Mouse liver cells

text: liver

characteristic: title


text: live

text: Generic

text: Mus musculus

text: Mouse liver cells

text: liver


text: John Kim, Ph.D., 6183 Life Sciences Institute, University of Michigan

text: live

text: Generic

text: gravid

characteristic: developmental stage

text: Caenorhabditis elegans

text: myo-3::PABP pulldown

characteristic: purification method

text: gravid

text: muscle


text: live

text: Generic

text: Caenorhabditis elegans

text: myo-3::PABP pulldown

text: muscle


Petromyzon marinus testes

text: University of Kentucky

text: live

text: Generic

text: Petromyzon marinus

text: Meiotic testes from Petromyzon marinus (sea lamprey)


text: National Laboratory of Genomics for Biodiversity

text: live

text: Generic

text: Xenopus laevis

text: Retinas from stage 24 embryos

characteristic: stage

text: retinas


text: live

text: Generic

text: Xenopus laevis

text: Retinas from stage 32 embryos

text: retinas


text: live

text: Generic

text: Xenopus laevis

text: Retinas from stage 40 embryos

text: retinas


text: Washington University, Genome Sequencing Center

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: total rna

characteristic: life cycle stage information

text: Oesophagostomum dentatum

characteristic: sample id

characteristic: sample name

text: rna

characteristic: sample type

text: Generic sample from Oesophagostomum dentatum


characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Generic

text: total rna

text: Oesophagostomum dentatum

text: rna


EST

text: LNCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: soil metagenome

text: EST


MAR

characteristic: External Id

text: LNCC

characteristic: INSDC center name

text: live

text: Generic

text: soil metagenome

characteristic: organism

text: MAR


text: Broad Institute

text: live

text: Generic

text: Generic

text: Female

characteristic: host sex

text: Elephantulus edwardii

text: Elephantulus edwardi_28Jun2011

text: Generic sample from Elephantulus edwardii

characteristic: title


text: University Of Aberdeen

text: live

text: Generic

text: United Kingdom: River Cerne, Dorset, England

characteristic: country

text: Fredericella sultana

text: whole body

characteristic: tissue-type

text: whole body subtracted library


text: Yuyama University of the Ryukyus

text: live

text: Generic

text: juveniles approximately 4 weeks after metamorphosis

characteristic: dev-stage

text: Acropora tenuis

text: full polyps

text: Acropora tenuis juvenile polyps cDNA library


text: Universite du Quebec a Montreal

text: live

text: Generic

text: Norstar

characteristic: cultivar

text: The coding sequence of the CBF gene was amplified with gene specific primers from genomic DNA. PCR products were cloned in pCRII-TOPO for sequencing.

characteristic: description

text: Triticum aestivum

text: Mixed crown and leaf

text: CBF genes amplified from the wheat cultivar Norstar

text: pCRII-TOPO

characteristic: vector


text: Universite du Quebec a Montreal

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Chinese Spring

text: Triticum aestivum

text: Mixed crown and leaf

text: CBF genes amplified from the wheat cultivar Chinese Spring

text: pCRII-TOPO


text: Universite du Quebec a Montreal

text: live

characteristic: INSDC status

text: Generic

text: Manitou

text: Triticum aestivum

text: Mixed crown and leaf

text: CBF genes amplified from the wheat cultivar Manitou

text: pCRII-TOPO


text: National Center for Genome Resources

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

text: Medicago sativa

characteristic: sample id

text: Medicago sativa 95-608_stem


characteristic: External Id

text: National Center for Genome Resources

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Medicago sativa

text: Medicago sativa ABI_408


text: National Center for Genome Resources

characteristic: INSDC center name

text: live

text: Generic

text: Medicago sativa

characteristic: organism

text: Medicago sativa Altet4_stem


text: National Center for Genome Resources

text: live

text: Generic

text: Medicago sativa

text: Medicago sativa B75GH-402

characteristic: title


text: National Center for Genome Resources

text: live

text: Generic

text: Medicago sativa

text: Medicago sativa B85-912


text: National Center for Genome Resources

text: live

text: Generic

text: Medicago sativa

text: Medicago sativa B85-920


text: National Center for Genome Resources

text: live

text: Generic

text: Medicago sativa

text: Medicago sativa B86-220


text: National Center for Genome Resources

text: live

text: Generic

text: Medicago sativa

text: Medicago sativa CV020017


text: National Center for Genome Resources

text: live

text: Generic

text: Medicago sativa

text: Medicago sativa CWA-9


text: National Center for Genome Resources

text: live

text: Generic

text: Medicago sativa

text: Medicago sativa CWB-7


text: National Center for Genome Resources

text: live

text: Generic

text: Medicago sativa

text: Medicago sativa CWD-10


text: National Center for Genome Resources

text: live

text: Generic

text: Medicago sativa

text: Medicago sativa CWI-4


text: National Center for Genome Resources

text: live

text: Generic

text: Medicago sativa

text: Medicago sativa DW000577


text: National Center for Genome Resources

text: live

text: Generic

text: Medicago sativa

text: Medicago sativa Dairyland263


text: National Center for Genome Resources

text: live

text: Generic

text: Medicago sativa

text: Medicago sativa Dairyland317


text: National Center for Genome Resources

text: live

text: Generic

text: Medicago sativa

text: Medicago sativa Dairyland833


text: National Center for Genome Resources

text: live

text: Generic

text: Medicago sativa

text: Medicago sativa Dairyland879W4


text: National Center for Genome Resources

text: live

text: Generic

text: Medicago sativa

text: Medicago sativa Falinta384


text: National Center for Genome Resources

text: live

text: Generic

text: Medicago sativa

text: Medicago sativa Gabes


text: National Center for Genome Resources

text: live

text: Generic

text: Medicago sativa

text: Medicago sativa LH050543


text: National Center for Genome Resources

text: live

text: Generic

text: Medicago sativa

text: Medicago sativa MS13


text: National Center for Genome Resources

text: live

text: Generic

text: Medicago sativa

text: Medicago sativa MS149


text: National Center for Genome Resources

text: live

text: Generic

text: Medicago sativa

text: Medicago sativa MS186


text: National Center for Genome Resources

text: live

text: Generic

text: Medicago sativa

text: Medicago sativa Magali-A


text: National Center for Genome Resources

text: live

text: Generic

text: Medicago sativa

text: Medicago sativa NECS141_stem


text: National Center for Genome Resources

text: live

text: Generic

text: Medicago sativa

text: Medicago sativa NL002724


text: National Center for Genome Resources

text: live

text: Generic

text: Medicago sativa

text: Medicago sativa Wisfal_6


text: Stem Cells & Regenerative Medicine, Biology, Clarkson University

text: live

text: Generic

characteristic: chip antibody

text: Mus musculus

text: Sox9 ChIP-seq

text: E13.5 embryos

characteristic: stage

text: CD1 wildtype

characteristic: strain

text: Limbs and tails

characteristic: tissue


text: live

text: Generic

text: goat IgG

text: Mus musculus

text: Sox9 ChIP-seq IgG control

text: E13.5 embryos

text: CD1 wildtype

text: Limbs and tails


text: live

text: Generic

text: rabbit IgG

text: Mus musculus

text: Sox5 ChIP-seq negative control

text: E13.5 embryos

text: CD1 wildtype

text: Limbs and tails


text: live

text: Generic

text: anti-HA

text: Mus musculus

text: Sox5 ChIP-seq

text: E13.5 embryos

text: CD1 HA-tagged transgenic mice

text: Limbs and tails


text: live

text: Generic

text: rabbit IgG

text: Mus musculus

text: Sox6 ChIP-seq IgG Control

text: E13.5 embryos

text: CD1 wildtype

text: Limbs and tails


text: live

text: Generic

text: Mus musculus

text: Sox6 ChIP-seq

text: E13.5 embryos

text: CD1 wildtype

text: Limbs and tails


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716 FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: RM11_1a FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 1_1_d FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 1_3_d FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 1_4_d FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 1_5_c FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 10_1_c FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 10_2_d FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 10_3_c FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 10_4_d FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 11_1_a FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 11_2_d FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 11_3_b FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 12_1_d FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 12_2_b FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 13_1_a FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 13_2_c FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 13_3_b FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 13_4_a FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 13_5_c FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 14_1_b FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 14_2_c FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 14_3_d FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 14_4_a FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 14_5_b FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 14_6_d FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 15_3_b FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 15_4_d FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 15_6_c FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 16_1_d FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 17_1_a FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 17_4_a FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 17_5_b FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 18_1_d FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 18_2_d FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 18_3_d FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 18_4_c FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 18_6_d FAIRE-seq


text: KAIST

text: live

text: Generic

text: Saccharomyces cerevisiae

text: yeast extract

text: BY4716xRM11_1a segregant

text: 19_1_c FAIRE-seq