text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Blood

characteristic: body site

text: DS-ASD-RD

text: No

characteristic: is tumor

text: SNP Genotypes (Array)

characteristic: molecular data type

text: Homo sapiens

characteristic: organism

text: male

text: Family/Twin/Trios

characteristic: study design

characteristic: study name

text: No

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Non-tumor DNA sample from Blood of a human male participant in the dbGaP study University of Miami Study on Genetics of Autism and Related Disorders (AutismDisorders)


status: PUBLIC

characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: DNA

tag: attribute

text: Blood

text: DS-ASD-RD

text: No

text: SNP Genotypes (Array)

text: Homo sapiens

text: male

characteristic: sex

text: Family/Twin/Trios

text: University of Miami Study on Genetics of Autism and Related Disorders (AutismDisorders)

text: No

characteristic: title


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Blood

characteristic: body site

text: DS-ASD-RD

text: No

characteristic: is tumor

text: SNP Genotypes (Array)

text: Homo sapiens

text: female

text: Family/Twin/Trios

text: No

text: Non-tumor DNA sample from Blood of a human female participant in the dbGaP study University of Miami Study on Genetics of Autism and Related Disorders (AutismDisorders)


text: dbGaP

text: live

text: Generic

text: DNA

text: Blood

text: DS-ASD-RD

text: No

text: SNP Genotypes (Array)

characteristic: molecular data type

text: Homo sapiens

characteristic: organism

text: male

text: Family/Twin/Trios

characteristic: study design

text: Autistic Disorder

characteristic: study disease

characteristic: study name

text: Yes

characteristic: subject is affected

characteristic: submitted sample id


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: DNA

text: Blood

text: DS-ASD-RD

text: No

text: SNP Genotypes (Array)

text: Homo sapiens

text: female

text: Family/Twin/Trios

text: Autistic Disorder

text: Yes

characteristic: submitted subject id

characteristic: submitter handle


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Blood

text: DS-ASD-RD

text: Yes

characteristic: is technical control

text: No

text: SNP Genotypes (Array)

text: Homo sapiens

text: male

characteristic: sex

text: Family/Twin/Trios

text: Autistic Disorder

text: Yes

characteristic: title


text: dbGaP

text: live

text: Generic

text: DNA

text: Blood

characteristic: body site

text: DS-ASD-RD

text: Yes

text: No

characteristic: is tumor

text: SNP Genotypes (Array)

characteristic: molecular data type

text: Homo sapiens

characteristic: organism

text: female

text: Family/Twin/Trios

characteristic: study design

characteristic: study name

text: No

characteristic: subject is affected


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: SRA accession

text: DNA

text: GRU

text: SNP Genotypes (NGS)

text: Homo sapiens

text: female

text: Mendelian

text: No

characteristic: submitted sample id

characteristic: submitted subject id

text: DNA sample from a human female participant in the dbGaP study Identification of Genes Involved in Familial Coronary Artery Disease


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: GRU

text: SNP Genotypes (NGS)

text: Homo sapiens

text: male

characteristic: sex

text: Mendelian

text: Coronary Artery Disease

characteristic: study disease

text: Yes

characteristic: submitter handle

text: DNA sample from a human male participant in the dbGaP study Identification of Genes Involved in Familial Coronary Artery Disease

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

text: DNA

text: GRU

text: SNP Genotypes (NGS)

characteristic: molecular data type

text: Homo sapiens

characteristic: organism

text: male

text: Mendelian

characteristic: study design

text: Coronary Artery Disease

text: Identification of Genes Involved in Familial Coronary Artery Disease

characteristic: study name

text: Yes

characteristic: subject is affected


text: dbGaP

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: SRA accession

text: DNA

text: GRU

text: SNP Genotypes (NGS)

text: Homo sapiens

text: female

text: Mendelian

text: Coronary Artery Disease

text: Yes

characteristic: submitted sample id

characteristic: submitted subject id


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: GRU

text: SNP Genotypes (NGS)

text: Homo sapiens

text: male

characteristic: sex

text: Mendelian

text: No


characteristic: External Id

text: Quest Diagnostics

characteristic: INSDC center name

text: live

text: Generic

text: 11 pooled samples, Roche barcodes MID6 - MID13 and MID15 - MID17

characteristic: description

text: Human immunodeficiency virus 1

characteristic: organism

text: Method Comparison Panel TR11_0519_1RDA

characteristic: title


text: Quest Diagnostics

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: 10 pooled samples Roche/454 barcodes MID7 - MID13 and MID15 - MID17

text: Human immunodeficiency virus 1

text: Method Comparison Panel TR11_0525_1RDA


text: Quest Diagnostics

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: 11 pooled samples, Roche/454 barcodes MID6 - MID13 and MID15 - MID17

text: Human immunodeficiency virus 1

text: Method Comparison Panel TR11_0528_1RDA


name: Transcriptome Analysis of midgut from Bactrocera dorsalis

text: College of Plant Protection southwest university

text: live

text: Generic

characteristic: SRA accession

text: Bactrocera dorsalis


name: Oreochromis nilotica 30 dah XX gonad transcritome

text: School of Life Science, Southwest University

text: live

text: Generic

text: Oreochromis niloticus


name: Oreochromis nilotica 30 dah XY gonad transcriptome

text: live

text: Generic

text: Oreochromis niloticus


text: University of Barcelona

text: live

text: Generic

text: marine metagenome

text: Diversity and Specificity of the Ascidian Microbiota


16S RNA

text: IGB Berlin

text: live

text: Generic

text: Isolation-source=microbial mat of hot springs, pelagic, sedument Priomer Sequences: CYA359F: GGGGAATYTTCCGCAATGGG CYA781R: GACTACWGGGGTATCTAATCCCWTT

text: Bacteria

text: 16S Amplicons from Lake Bogoria


Lake Bogoria

text: IGB Berlin

text: live

text: Generic

text: Bacteria

text: Metagenome Samples


text: Dr Purnima Bhargava, Dr Purnima Bhargava, Center for Cellular and Molecular Biology

text: live

text: Generic

text: ANTI-FLAG M2 Affinity Gel (Sigma)

characteristic: antibody

text: Saccharomyces cerevisiae

text: Log-phase cells

text: RPC128-FLAG IP_Normal Growth_Replicate1


text: live

text: Generic

characteristic: NCBI submission model

text: ANTI-FLAG M2 Affinity Gel (Sigma)

text: Saccharomyces cerevisiae

text: Log-phase cells

text: RPC128-FLAG IP_Normal Growth_Replicate2


text: live

text: Generic

characteristic: NCBI submission package

text: Sepharose® CL-4B (Sigma)

text: Saccharomyces cerevisiae

text: Log-phase cells

text: RPC128-FLAG MOCK_Normal Growth


text: live

text: Generic

text: ANTI-FLAG M2 Affinity Gel (Sigma)

text: Saccharomyces cerevisiae

text: Log-phase cells shifted to 0.15X YEP minus carbon source (4hours)

text: RPC128-FLAG IP_Nutrient Starvation_Replicate1


text: live

text: Generic

text: ANTI-FLAG M2 Affinity Gel (Sigma)

text: Saccharomyces cerevisiae

text: RPC128-FLAG IP_Nutrient Starvation_Replicate2


text: live

text: Generic

text: Sepharose® CL-4B (Sigma)

text: Saccharomyces cerevisiae

text: RPC128-FLAG MOCK_Nutrient Starvation


Willow Warbler 2012

text: Lund University

text: live

text: Generic

text: Eight males of were caught during time of breeding in Southern Sweden (ssp. trochilus, Krankesjön, 55*43'N, 13*25'E, 8-19 May 2008) and in Northern Sweden (ssp. acredula, Tångböle (N=4), 63*22'N, 12*36'E, 30 May 2008; Anjan (N=4), 63*43'N, 12*32'E, 31 May 2008). Eight individuals of each subspecies were also caught during time of migration in Southern Sweden (ssp. trochilus, Krankesjön, 15-16 August 2008) and in Northern Sweden (ssp. acredula, Skeppshamn, 62*23'N, 17*44'E, 19 August 2008). Once caught, birds were decapitated and had their brain immediately put in RNAlaterTM RNA stabilization agent (Qiagen, Hilden, Germany). In the lab, whole brains were homogenized in 1 ml of QIA-zol Lysis Reagent (Qiagen, Hilden, Germany) per 100 mg tissue using a Tissuelyser (Qiagen, Hilden, Germany). Total RNA was extracted using RNeasy Lipid Tissue Mini Kit (Qiagen, Hilden, Germany) following the manufacturer’s instructions. The quality of the samples was checked on a formaldehyde agarose gel and using an Ultraspec 300 spectrophotometer (Pharmacia Biotech, Uppsala, Sweden) to measure 260/280 absorption (all values were between 1.95 and 2.05).

text: Phylloscopus trochilus

text: Willow Warbler - trochilus and acredula


text: Center for Bioinformatics and Genomics, Department of Biostatistics and Bioinformatics, Tulane University School of Public Health & Tropical Medicine

text: live

text: Generic

text: Peripheral Blood Monocytes

characteristic: cell type

text: female

characteristic: gender

text: Homo sapiens

text: Caucasion

characteristic: race

text: Peripheral Blood Monocytes


Trypanosoma vivax

text: Institut PAsteur Montevideo

text: live

text: Generic

text: RNAseq analysis of bloodstream stage of T. vivax Liem 176.

text: Trypanosoma vivax

text: RNAseq Trypanosoma vivax (bloodstream form)


text: DBDC, Fundación CNIC

text: live

text: Generic

text: embryonic day 11.5

characteristic: developmental stage

text: wild type

characteristic: genotype/variation

text: Mus musculus

text: E11.5 Embryo

characteristic: strain

text: whole embryo

characteristic: tissue

text: Meis WT RNAseq M8


characteristic: External Id

text: DBDC, Fundación CNIC

characteristic: INSDC center name

text: live

text: Generic

text: embryonic day 11.5

text: wild type

text: Mus musculus

characteristic: organism

text: E11.5 Embryo

text: whole embryo

text: Meis WT RNAseq 1599


text: DBDC, Fundación CNIC

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: embryonic day 11.5

text: wild type

text: Mus musculus

text: E11.5 Embryo

text: whole embryo

text: Meis WT RNAseq 1603

characteristic: title


text: DBDC, Fundación CNIC

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: SRA accession

text: embryonic day 11.5

text: Meis KO

text: Mus musculus

text: E11.5 Embryo

text: whole embryo

text: Meis KO RNAseq 1600


text: DBDC, Fundación CNIC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: embryonic day 11.5

text: Meis KO

text: Mus musculus

text: E11.5 Embryo

text: whole embryo

text: Meis KO RNAseq 1601


text: DBDC, Fundación CNIC

text: live

text: Generic

text: embryonic day 11.5

text: Meis KO

text: Mus musculus

text: E11.5 Embryo

text: whole embryo

text: Meis KO RNAseq M1


text: DBDC, Fundación CNIC

text: live

text: Generic

text: embryonic day 11.5

text: wild type

text: Mus musculus

text: E11.5 Embryo

text: whole embryo

text: Prep1 WT RNAseq


text: DBDC, Fundación CNIC

text: live

text: Generic

text: embryonic day 11.5

text: Prep Hypo

text: Mus musculus

text: E11.5 Embryo

text: whole embryo

text: Prep Hypo RNAseq


text: DBDC, Fundación CNIC

text: live

text: Generic

text: Meis1/2 (K830, K844)

characteristic: chip antibody

text: embryonic day 11.5

text: Mus musculus

text: E11.5 Embryo Trunk

text: embryo trunk

text: WT Meis ChIP


text: DBDC, Fundación CNIC

text: live

text: Generic

text: Prep1/2 (N15 Santa Cruz)

text: embryonic day 11.5

text: Mus musculus

text: E11.5 Embryo Trunk

text: embryo trunk

text: WT Prep ChIP


text: DBDC, Fundación CNIC

text: live

text: Generic

text: Pbx1 (4342 CST)

text: embryonic day 11.5

text: Mus musculus

text: E11.5 Embryo Trunk

text: embryo trunk

text: WT Pbx1 ChIP


text: DBDC, Fundación CNIC

text: live

text: Generic

text: embryonic day 11.5

text: Mus musculus

text: E11.5 Embryo Trunk

text: embryo trunk

text: WT Meis Input


text: DBDC, Fundación CNIC

text: live

text: Generic

text: embryonic day 11.5

text: Mus musculus

text: E11.5 Embryo Trunk

text: embryo trunk

text: WT Prep Input


text: DBDC, Fundación CNIC

text: live

text: Generic

text: embryonic day 11.5

text: Mus musculus

text: E11.5 Embryo Trunk

text: embryo trunk

text: WT Pbx1 Input


Brucella suis VBI22

text: Virginia Bioinformatics Institute

text: live

text: Generic

text: Brucella suis VBI22

text: Brucella suis VBI22 by Illumina Sequencing


text: DOE Joint Genome Institute

text: live

text: Generic

characteristic: description

characteristic: sample number

text: DSM 9293

text: Sample from Sulfobacillus thermosulfidooxidans DSM 9293


A. marginale strain St. Maries

text: Washington State University

text: live

text: Generic

text: A. marginale strain St. Maries infecting cattle. Total RNA isolated and selective hybridization performed to enrich for bacterial sequences. Sequenced with an Illumina platform.

text: Anaplasma marginale

text: A. marginale strain St. Maries 1 transcriptome in cattle host


A. marginale strain St. Maries 2

text: Washington State University

text: live

text: Generic

text: Anaplasma marginale

text: A. marginale strain St. Maries 2 in cattle host


text: biopop, College of Agriculture Sciences, Seoul National University

text: live

text: Generic

text: 30 months

characteristic: age

text: Hanwoo

characteristic: breed

text: Hanwoo Experimental Station in National Institute of Animal Science

characteristic: feeding barn

text: female

characteristic: gender

text: Bos taurus

text: omental fat tissue

text: omental fat tissue


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: 30 months

text: Hanwoo

text: female

text: Bos taurus

text: subcutaneous fat tissue

text: subcutaneous fat tissue

characteristic: tissue


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: 30 months

text: Hanwoo

text: female

text: Bos taurus

characteristic: organism

text: intramuscular fat tissue

text: intramuscular fat tissue


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: 30 months

text: Hanwoo

text: female

text: Bos taurus

text: muscle

text: muscle

characteristic: title


text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: 30 months

text: Hanwoo

text: castrated male

characteristic: gender type

text: Bos taurus

text: omental fat tissue

text: omental fat tissue


text: live

text: Generic

text: 30 months

characteristic: age

text: Hanwoo

text: castrated male

text: Bos taurus

text: subcutaneous fat tissue

text: subcutaneous fat tissue


text: live

text: Generic

text: 30 months

text: Hanwoo

characteristic: breed

text: castrated male

text: Bos taurus

text: intramuscular fat tissue

text: intramuscular fat tissue


text: live

text: Generic

text: 30 months

text: Hanwoo

characteristic: feeding barn

text: castrated male

text: Bos taurus

text: muscle

text: muscle


text: live

text: Generic

text: 30 months

text: Hanwoo

text: male

characteristic: gender

text: Bos taurus

text: omental fat tissue

text: omental fat tissue


characteristic: External Id

text: live

text: Generic

text: 30 months

text: Hanwoo

text: male

text: Bos taurus

text: subcutaneous fat tissue

text: subcutaneous fat tissue


characteristic: INSDC center name

text: live

text: Generic

text: 30 months

text: Hanwoo

text: male

text: Bos taurus

text: intramuscular fat tissue

text: intramuscular fat tissue


text: live

text: Generic

text: 30 months

text: Hanwoo

text: male

text: Bos taurus

text: muscle

text: muscle

characteristic: tissue


A. marginale strain Florida

text: Washington State University

characteristic: INSDC first public

text: live

text: Generic

text: A. marginale strain Florida infecting cattle. Total RNA isolated and selective hybridization performed to enrich for bacterial sequences. Sequenced with an Illumina platform.

characteristic: description

text: Anaplasma marginale

text: A. marginale strain Florida 1 in cattle host


text: Baylor College of Medicine

characteristic: INSDC last update

text: live

text: Generic

text: vaginal introitus

characteristic: body site

text: INT

characteristic: gestational age

text: human metagenome

characteristic: organism

text: Pregnant

characteristic: phenotype

text: female

characteristic: sex

text: Homo sapiens

characteristic: specific host


text: Baylor College of Medicine

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: vaginal introitus

text: INT

text: human metagenome

text: Pregnant

text: female

text: Homo sapiens

characteristic: title


text: Baylor College of Medicine

text: live

text: Generic

characteristic: age

text: mid vagina

text: MID

text: human metagenome

text: Pregnant

text: female

text: Homo sapiens


characteristic: External Id

text: Baylor College of Medicine

text: live

text: Generic

text: posterior vaginal fornix

text: PF

text: human metagenome

text: Pregnant

text: female

text: Homo sapiens


text: USDA/ARS/NADC/FSEPRU

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: Fecal samples were collected from pigs housed in a controlled environment at the National Animal Disease Center Entrez link Biosample 1081666

text: Viruses

text: Fecal samples from non-inoculated pigs at day 21


text: USDA/ARS/NADC/FSEPRU

characteristic: INSDC first public

text: live

text: Generic

characteristic: description

text: Viruses

text: Fecal samples from low-shedder pigs at day 21


text: USDA/ARS/NADC/FSEPRU

characteristic: INSDC last update

text: live

text: Generic

text: Viruses

text: Fecal samples from high-shedder pigs at day 21


text: DOE Joint Genome Institute

text: live

text: Generic

text: Daldinia sp. EC12

text: Daldinia sp. EC12

characteristic: sample number

characteristic: strain

text: Sample from Daldinia sp. EC12


A. marginale strain Florida 2

text: Washington State University

text: live

text: Generic

text: Anaplasma marginale

characteristic: organism

text: A. marginale strain Florida 2 in cattle host


Internal controls

text: USDA/ARS/NADC/FSEPRU

text: live

text: Generic

text: Viruses

text: Internal controls for the 16S amplicon sequencing in the swine Salmonella challenge experiment


A. marginale strain St. Maries 454

text: Washington State University

text: live

text: Generic

text: A. marginale strain St. Maries infecting cattle. Total RNA isolated and selective hybridization performed to enrich for bacterial sequences. Sequenced with Roche’s 454 platform.

text: Anaplasma marginale

text: A. marginale strain St. Maries 454 in cattle host


A. marginale strain St. Maries 454-2

text: Washington State University

text: live

text: Generic

text: Anaplasma marginale

text: A. marginale strain St. Maries 454-2 in cattle host


A. marginale strain Florida 454

text: Washington State University

text: live

text: Generic

text: A. marginale strain Florida infecting cattle. Total RNA isolated and selective hybridization performed to enrich for bacterial sequences. Sequenced with Roche’s 454 platform.

text: Anaplasma marginale

text: A. marginale strain Florida 454 in cattle host


A. marginale strain Florida 454-2

text: Washington State University

text: live

text: Generic

text: Anaplasma marginale

text: A. marginale strain Florida 454-2 in cattle host


A. marginale strain St.Maries IT

text: Washington State University

text: live

text: Generic

text: A. marginale strain St. Maries infecting cattle. Total RNA isolated and selective hybridization performed to enrich for bacterial sequences. Sequenced with an Ion Torrent platform.

text: Anaplasma marginale

text: A. marginale strain St. Maries IT in cattle host


A. marginale strain Florida IT

text: Washington State University

text: live

text: Generic

text: A. marginale strain Florida infecting cattle. Total RNA isolated and selective hybridization performed to enrich for bacterial sequences. Sequenced with an Ion Torrent platform.

text: Anaplasma marginale

text: A. marginale strain Florida IT in cattle host


text: USC

text: live

text: Generic

text: Post-transcriptional and co-transcriptional regulation is now recognized as a crucial link between genotype and phenotype. The central players are the RNA-binding proteins, and experimental technologies (such as CLIP- and RIP-Seq) for probing their activities have advanced rapidly over the course of the past decade. Statistically robust, flexible computational methods for binding site identification from high-throughput immunoprecipitation assays are largely lacking however. We introduce a method for site identification which provides four key advantages over previous methods: (1) it can be applied on all CLIP-Seq variants and on RIP-Seq (2) it accurately models the underlying read-count distributions (3) it allows external covariates, such as transcript abundance (which we demonstrate is highly correlated with read count) to inform the process, and (4) it allows comparison of site usage across cell-types or conditions.

text: Homo sapiens

text: Site identification in high-throughput RNA-protein interaction data


PRJNA67511.An.baimaii Tamu_1

text: Broad Institute

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: Anopheles dirus

text: An.baimaii Tamu_1

characteristic: sample name

text: Generic sample from Anopheles dirus


PRJNA67511.An.baimaii Dawei_1

text: Broad Institute

text: live

characteristic: INSDC status

text: Generic

text: Generic

text: Anopheles dirus

text: An.baimaii Dawei_1

text: Generic sample from Anopheles dirus


PRJNA67511.An.baimaii Mudon_1

text: Broad Institute

text: live

text: Generic

characteristic: NCBI submission model

text: Generic

text: Anopheles dirus

text: An.baimaii Mudon_1

text: Generic sample from Anopheles dirus


PRJNA67511.An.baimaii NE India_1

text: Broad Institute

text: live

text: Generic

characteristic: NCBI submission package

text: Generic

text: Anopheles dirus

text: An.baimaii NE India_1

text: Generic sample from Anopheles dirus


PRJNA67511.An.minimus Thailand_1

text: Broad Institute

text: live

text: Generic

text: Generic

text: Anopheles minimus

text: An.minimus Thailand_1

text: Generic sample from Anopheles minimus

characteristic: title


PRJNA67511.An.minimus India_1

text: Broad Institute

text: live

text: Generic

text: Generic

text: Anopheles minimus

text: An.minimus India_1

text: Generic sample from Anopheles minimus


text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecium EnGen0314

text: Enterococcus faecium Efm_NY1-1

text: Generic sample from Enterococcus faecium Efm_NY1-1


text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecium EnGen0323

text: Enterococcus faecium Efm_NY1-6

text: Generic sample from Enterococcus faecium Efm_NY1-6


text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecium EnGen0312

text: Enterococcus faecium Efm_NY3-1

text: Generic sample from Enterococcus faecium Efm_NY3-1


text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecium EnGen0319

text: Enterococcus faecium Efm_NY1-4

text: Generic sample from Enterococcus faecium Efm_NY1-4


text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecium EnGen0318

text: Enterococcus faecium Efm_NY1-3

text: Generic sample from Enterococcus faecium Efm_NY1-3


text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecium EnGen0321

text: Enterococcus faecium Efm_NY1-5

text: Generic sample from Enterococcus faecium Efm_NY1-5


text: Broad Institute

text: live

text: Generic

text: Generic

text: Enterococcus faecium EnGen0316

text: Enterococcus faecium Efm_NY1-2

text: Generic sample from Enterococcus faecium Efm_NY1-2


text: Broad Institute

text: live

text: Generic

text: Generic

text: Brucella canis CNGB 513

characteristic: collaborator sample id

text: broadinstitute.org:bsp.prod.sample:2TGG7

characteristic: lsid

text: Brucella canis CNGB 513

characteristic: sample barcode

text: Genomic DNA

characteristic: sample type

text: Other

characteristic: sex

text: CNGB 513

text: Brucella canis CNGB 513 Genomic DNA sample 187237.0


characteristic: External Id

text: Broad Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: Generic

text: Brucella abortus CNGB 759

text: broadinstitute.org:bsp.prod.sample:2TGG6

text: Brucella abortus CNGB 759

text: Genomic DNA

text: Other

text: CNGB 759

text: Brucella abortus CNGB 759 Genomic DNA sample 187244.0


text: Broad Institute

characteristic: INSDC last update

text: live

text: Generic

text: Generic

text: Brucella abortus 78/32

text: broadinstitute.org:bsp.prod.sample:2TGG9

text: Brucella abortus 78/32

characteristic: organism

text: Genomic DNA

text: Other

characteristic: strain

text: Brucella abortus 78/32 Genomic DNA sample 187245.0


PRJNA167645.5/20 2

text: Broad Institute

text: live

characteristic: INSDC status

text: Generic

text: Generic

characteristic: biosamplemodel

text: Saccharomyces cerevisiae W303

text: 5/20 2

characteristic: sample name

text: Generic sample from Saccharomyces cerevisiae W303


text: NBAGR

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Transcriptome assembly of ten tissues of single humped Indian camel using Illumina paired end 30x coverage reads.

characteristic: description

text: Camelus dromedarius

text: transcriptome assembly of camelus dromedarius

characteristic: title


text: NBAGR

text: live

text: Generic

text: Transcriptome Assembly of nine tissues of Bubalus bubalis using Illumina paired end reads with 30x coverage.

text: Bubalus bubalis bubalis

text: Transcriptome assembly of Riverine Buffalo


camelus bactrainus

text: NBAGR

text: live

text: Generic

text: Camelus bactrianus

text: camelus bactrianus transcriptome


text: Friedrich Miescher Institute for Biomedical Research

text: live

text: Generic

text: mixed 129-C57Bl/6

characteristic: background strain

text: embryonic stem cells

characteristic: cell type

text: wild type

characteristic: genotype

characteristic: mbd protein

text: Mus musculus

text: embryonic stem cells


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: mixed 129-C57Bl/6

text: ES-derived neuronal progenitor cells

text: wild type

text: Mus musculus

text: neuronal progenitor cells


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: mixed 129-C57Bl/6

text: ES-derived post mitotic neuronal cells

text: wild type

text: Mus musculus

text: post mitotic neuronal cells


text: live

characteristic: INSDC status

text: Generic

text: mixed 129-C57Bl/6

text: embryonic stem cells

text: Dnmt1,Dnmt3a,Dnmt3b triple KO

text: Mus musculus

characteristic: organism

text: embryonic stem cells


mature sperm cells

text: Institute of Biophysics

text: live

text: Generic

text: Caenorhabditis elegans

characteristic: strain

text: Caenorhabditis elegans sperm cells


text: National Institute Of Biological Sciences, Beijing (NIBS)

text: live

text: Generic

characteristic: NCBI submission model

text: TSKM-iPS mouse derived fibroblast

text: 5hmC pAb

characteristic: chip antibody

text: Active Motif

characteristic: chip antibody manufacturer

text: Mus musculus

text: fibroblast cell line

characteristic: stage or passages

text: fibroblast 5hmC


text: live

text: Generic

characteristic: NCBI submission package

text: TSKM-iPS mouse derived fibroblast

text: 5mC mAb

text: Calbiochem

text: Mus musculus

text: fibroblast cell line

text: fibroblast 5mC

characteristic: title


text: live

text: Generic

text: TSKM-iPS mouse derived fibroblast cells (3-days induced)

characteristic: cell type

text: 5hmC pAb

text: Active Motif

text: Mus musculus

text: TSKM-3D cells(intermediate stage)

text: p4 supply with doxycycline for 3 days

text: TSKM-3D cell 5hmC


text: live

text: Generic

text: 5mC mAb

text: Calbiochem

text: Mus musculus

text: TSKM-3D cells(intermediate stage)

text: p4 supply with doxycycline for 3 days

text: TSKM-3D cell 5mC


text: live

text: Generic

text: tet1 sox2 klf4 and c-Myc inducted iPS cells (derived driven from TSKM 2nd reprogramming system with full pluripotency)

text: 5hmC pAb

text: Active Motif

text: Mus musculus

text: iPS cell line

text: iPS cell line 5hmC


text: live

text: Generic

text: 5mC mAb

text: Calbiochem

text: Mus musculus

text: iPS cell line

text: iPS cell line 5mc


text: Cornell University

text: live

text: Generic

text: Ribosome profiling reads from HEK293 cells treated with 100 μM cycloheximide for 30 min, technical replicate #1.

characteristic: description

text: Homo sapiens

text: Ribosome profiling of HEK293 cells treated with cycloheximide, technical replicate #1


characteristic: External Id

text: Cornell University

text: live

text: Generic

text: Ribosome profiling reads from HEK293 cells treated with 100 μM cycloheximide for 30 min, technical replicate #2.

text: Homo sapiens

text: Ribosome profiling of HEK293 cells treated with cycloheximide, technical replicate #2


text: Cornell University

characteristic: INSDC center name

text: live

text: Generic

text: Ribosome profiling reads from HEK293 cells treated with 50 μM lactimidomycin for 30 min, technical replicate #1.

text: Homo sapiens

text: Ribosome profiling of HEK293 cells treated with lactimidomycin, technical replicate #1


text: Cornell University

characteristic: INSDC first public

text: live

text: Generic

text: Ribosome profiling reads from HEK293 cells treated with 50 μM lactimidomycin for 30 min, technical replicate #2.

text: Homo sapiens

text: Ribosome profiling of HEK293 cells treated with lactimidomycin, technical replicate #2


text: JCVI

characteristic: INSDC last update

text: live

text: Pathogen.vi-cl

text: Aubree Gordon

characteristic: collected-by

characteristic: collection date

text: Nicaragua:Managua

characteristic: geo loc name

characteristic: host-age

text: female

characteristic: host-sex

text: Nasal and Throat

characteristic: isolation source

characteristic: passage-history

text: Homo sapiens

characteristic: specific host

text: Viral, clinical or host-associated sample from Influenza B virus (B/Managua/2941.01/2008)


text: JCVI

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.vi-cl

characteristic: NCBI submission model

characteristic: SRA accession

text: Aubree Gordon

text: Nicaragua:Managua

text: male

text: Nasal and Throat

characteristic: organism

text: Homo sapiens

text: Viral, clinical or host-associated sample from Influenza B virus (B/Managua/4702.01/2008)


characteristic: External Id

text: JCVI

text: live

text: Pathogen.vi-cl

characteristic: NCBI submission package

text: Aubree Gordon

text: Nicaragua:Managua

text: male

text: Nasal and Throat

text: Homo sapiens

text: Viral, clinical or host-associated sample from Influenza B virus (B/Managua/2650.02/2008)

characteristic: title


text: JCVI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.vi-cl

text: Aubree Gordon

text: Nicaragua:Managua

text: male

text: Nasal and Throat

text: Homo sapiens

text: Viral, clinical or host-associated sample from Influenza B virus (B/Managua/921.01/2008)


text: JCVI

text: live

text: Pathogen.vi-cl

text: Aubree Gordon

characteristic: collected-by

characteristic: collection date

text: Nicaragua:Managua

characteristic: geo loc name

text: male

text: Nasal and Throat

text: Homo sapiens

text: Viral, clinical or host-associated sample from Influenza B virus (B/Managua/36.01/2008)


text: JCVI

text: live

text: Pathogen.vi-cl

text: Aubree Gordon

text: Nicaragua:Managua

characteristic: host-age

text: male

characteristic: host-sex

text: Nasal and Throat

characteristic: isolation source

text: Homo sapiens

text: Viral, clinical or host-associated sample from Influenza B virus (B/Managua/4479.01/2008)


text: JCVI

characteristic: INSDC secondary accession

text: live

text: Pathogen.vi-cl

text: Aubree Gordon

text: Nicaragua:Managua

text: male

text: Nasal and Throat

characteristic: passage-history

text: Homo sapiens

characteristic: specific host

text: Viral, clinical or host-associated sample from Influenza B virus (B/Managua/1365.02/2008)


text: JCVI

text: live

characteristic: INSDC status

text: Pathogen.vi-cl

characteristic: NCBI submission model

characteristic: SRA accession

text: Aubree Gordon

text: Nicaragua:Managua

text: female

text: Nasal and Throat

text: Homo sapiens

text: Viral, clinical or host-associated sample from Influenza B virus (B/Managua/3640.01/2008)


characteristic: External Id

text: JCVI

text: live

text: Pathogen.vi-cl

characteristic: NCBI submission package

text: Aubree Gordon

text: Nicaragua:Managua

text: male

text: Nasal and Throat

characteristic: organism

text: Homo sapiens

text: Viral, clinical or host-associated sample from Influenza B virus (B/Managua/274.02/2008)


text: JCVI

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.vi-cl

text: Aubree Gordon

text: Nicaragua:Managua

text: male

text: Nasal and Throat

text: Homo sapiens

text: Viral, clinical or host-associated sample from Influenza B virus (B/Managua/3342.01/2008)

characteristic: title


text: JCVI

characteristic: INSDC last update

text: live

text: Pathogen.vi-cl

text: Aubree Gordon

characteristic: collected-by

characteristic: collection date

text: Nicaragua:Managua

text: female

text: Nasal and Throat

text: Homo sapiens

text: Viral, clinical or host-associated sample from Influenza B virus (B/Managua/5024.01/2008)


text: JCVI

text: live

text: Pathogen.vi-cl

text: Aubree Gordon

text: Nicaragua:Managua

characteristic: geo loc name

characteristic: host-age

text: female

characteristic: host-sex

text: Nasal and Throat

text: Homo sapiens

text: Viral, clinical or host-associated sample from Influenza B virus (B/Managua/3387.03/2008)


text: JCVI

characteristic: INSDC secondary accession

text: live

text: Pathogen.vi-cl

text: Aubree Gordon

text: Nicaragua:Managua

text: female

text: Nasal and Throat

characteristic: isolation source

characteristic: passage-history

text: Homo sapiens

text: Viral, clinical or host-associated sample from Influenza B virus (B/Managua/3425.01/2008)


text: JCVI

text: live

characteristic: INSDC status

text: Pathogen.vi-cl

characteristic: NCBI submission model

text: Aubree Gordon

text: Nicaragua:Managua

text: male

text: Nasal and Throat

text: Homo sapiens

characteristic: specific host

text: Viral, clinical or host-associated sample from Influenza B virus (B/Managua/4498.01/2008)


characteristic: External Id

text: JCVI

text: live

text: Pathogen.vi-cl

characteristic: NCBI submission package

characteristic: SRA accession

text: Aubree Gordon

text: Nicaragua:Managua

text: female

text: Nasal and Throat

text: Homo sapiens

text: Viral, clinical or host-associated sample from Influenza B virus (B/Managua/1089.01/2008)


text: JCVI

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.vi-cl

text: Aubree Gordon

text: Nicaragua:Managua

text: male

text: Nasal and Throat

characteristic: organism

text: Homo sapiens

text: Viral, clinical or host-associated sample from Influenza B virus (B/Managua/2056.03/2008)


text: JCVI

characteristic: INSDC last update

text: live

text: Pathogen.vi-cl

text: Aubree Gordon

characteristic: collected-by

text: Nicaragua:Managua

text: male

text: Nasal and Throat

text: Homo sapiens

text: Viral, clinical or host-associated sample from Influenza B virus (B/Managua/673.02/2008)

characteristic: title


text: JCVI

text: live

text: Pathogen.vi-cl

text: Aubree Gordon

characteristic: collection date

text: Nicaragua:Managua

characteristic: geo loc name

characteristic: host-age

text: male

text: Nasal and Throat

text: Homo sapiens

text: Viral, clinical or host-associated sample from Influenza B virus (B/Managua/468.01/2008)


text: JCVI

characteristic: INSDC secondary accession

text: live

text: Pathogen.vi-cl

text: Aubree Gordon

text: Nicaragua:Managua

text: female

characteristic: host-sex

text: Nasal and Throat

characteristic: isolation source

text: Homo sapiens

text: Viral, clinical or host-associated sample from Influenza B virus (B/Managua/4982.02/2008)


text: JCVI

text: live

characteristic: INSDC status

text: Pathogen.vi-cl

characteristic: NCBI submission model

text: Aubree Gordon

text: Nicaragua:Managua

text: female

text: Nasal and Throat

characteristic: passage-history

text: Homo sapiens

text: Viral, clinical or host-associated sample from Influenza B virus (B/Managua/177.02/2008)


characteristic: External Id

text: JCVI

text: live

text: Pathogen.vi-cl

characteristic: NCBI submission package

text: Jonathan Runstadler MS, DVM, PhD

text: USA:Alaska

text: after hatch year

text: male

text: cloacal

text: Egg 1

text: Mallard

characteristic: specific host

characteristic: subtype

text: Viral, clinical or host-associated sample from Influenza A virus (A/mallard/Interior Alaska/7MP2230/2007(H1N6))


text: JCVI

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.vi-cl

characteristic: SRA accession

text: Jonathan Runstadler MS, DVM, PhD

text: USA:Alaska

text: hatch year

text: male

text: cloacal

characteristic: organism

text: Egg 1

text: Mallard

text: Viral, clinical or host-associated sample from Influenza A virus (A/mallard/Interior Alaska/7MP0167/2007(H12N5))


text: JCVI

characteristic: INSDC last update

text: live

text: Pathogen.vi-cl

text: Jonathan Runstadler MS, DVM, PhD

characteristic: collected-by

characteristic: collection date

text: USA:Alaska

text: after hatch year

text: female

text: cloacal

text: Egg 1

text: American wigeon

text: Viral, clinical or host-associated sample from Influenza A virus (A/American widgeon/Interior Alaska/7MP1768/2007(H3N8))

characteristic: title


text: JCVI

characteristic: INSDC secondary accession

text: live

text: Pathogen.vi-cl

text: Jonathan Runstadler MS, DVM, PhD

text: USA:Alaska

characteristic: geo loc name

text: after hatch year

characteristic: host-age

text: female

characteristic: host-sex

text: cloacal

text: Egg 1

text: Mallard

text: Viral, clinical or host-associated sample from Influenza A virus (A/mallard/Interior Alaska/7MP0512/2007(H4N6))


text: JCVI

text: live

characteristic: INSDC status

text: Pathogen.vi-cl

characteristic: NCBI submission model

text: Jonathan Runstadler MS, DVM, PhD

text: USA:Alaska

text: hatch year

text: female

text: cloacal

characteristic: isolation source

text: Egg 1

characteristic: passage-history

text: Northern pintail

text: Viral, clinical or host-associated sample from Influenza A virus (A/northern pintail/Interior Alaska/7MP1246/2007(H4N6))


characteristic: External Id

text: JCVI

text: live

text: Pathogen.vi-cl

characteristic: NCBI submission package

text: Jonathan Runstadler MS, DVM, PhD

text: USA:Alaska

text: hatch year

text: male

text: cloacal

text: Egg 1

text: Northern shoveler

characteristic: specific host

characteristic: subtype

text: Viral, clinical or host-associated sample from Influenza A virus (A/northern shoveler/Interior Alaska/7MP1765/2007(H3N8))


text: JCVI

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.vi-cl

characteristic: SRA accession

text: Jonathan Runstadler MS, DVM, PhD

text: USA:Alaska

text: hatch year

text: male

text: cloacal

characteristic: organism

text: Egg 1

text: Northern shoveler

text: Viral, clinical or host-associated sample from Influenza A virus (A/northern shoveler/Interior Alaska/7MP0944/2007(H3N8))


text: JCVI

characteristic: INSDC last update

text: live

text: Pathogen.vi-cl

text: Jonathan Runstadler MS, DVM, PhD

characteristic: collected-by

characteristic: collection date

text: USA:Alaska

text: hatch year

text: female

text: cloacal

text: Egg 1

text: Mallard

text: Viral, clinical or host-associated sample from Influenza A virus (A/mallard/Interior Alaska/7MP1056/2007(H3N8))

characteristic: title


text: JCVI

characteristic: INSDC secondary accession

text: live

text: Pathogen.vi-cl

text: Jonathan Runstadler MS, DVM, PhD

text: USA:Alaska

characteristic: geo loc name

text: hatch year

characteristic: host-age

text: male

characteristic: host-sex

text: cloacal

text: Egg 1

text: Northern shoveler

text: Viral, clinical or host-associated sample from Influenza A virus (A/northern shoveler/Interior Alaska/7MP1077/2007(H1N1))


text: JCVI

text: live

characteristic: INSDC status

text: Pathogen.vi-cl

characteristic: NCBI submission model

text: Jonathan Runstadler MS, DVM, PhD

text: USA:Alaska

text: hatch year

text: female

text: cloacal

characteristic: isolation source

text: Egg 1

characteristic: passage-history

text: Northern shoveler

text: Viral, clinical or host-associated sample from Influenza A virus (A/northern shoveler/Interior Alaska/7MP1080/2007(H3N8))


characteristic: External Id

text: JCVI

text: live

text: Pathogen.vi-cl

characteristic: NCBI submission package

text: Jonathan Runstadler MS, DVM, PhD

text: USA:Alaska

text: hatch year

text: female

text: cloacal

text: Egg 1

text: Northern shoveler

characteristic: specific host

characteristic: subtype

text: Viral, clinical or host-associated sample from Influenza A virus (A/northern shoveler/Interior Alaska/7MP1081/2007(H1N1))


text: JCVI

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.vi-cl

characteristic: SRA accession

text: Jonathan Runstadler MS, DVM, PhD

text: USA:Alaska

text: hatch year

text: female

text: cloacal

characteristic: organism

text: Egg 1

text: Northern pintail

text: Viral, clinical or host-associated sample from Influenza A virus (A/northern pintail/Interior Alaska/7MP0278/2007(H1N1))


text: JCVI

characteristic: INSDC last update

text: live

text: Pathogen.vi-cl

text: Jonathan Runstadler MS, DVM, PhD

characteristic: collected-by

characteristic: collection date

text: USA:Alaska

text: hatch year

text: male

text: cloacal

text: Egg 1

text: Northern pintail

text: Viral, clinical or host-associated sample from Influenza A virus (A/northern pintail/Interior Alaska/7MP0692/2007(H1N1))

characteristic: title


text: JCVI

characteristic: INSDC secondary accession

text: live

text: Pathogen.vi-cl

text: Jonathan Runstadler MS, DVM, PhD

text: USA:Alaska

characteristic: geo loc name

text: cloacal

text: Egg 1

text: Least sandpiper

text: Viral, clinical or host-associated sample from Influenza A virus (A/least sandpiper/South Central Alaska/7KW0434/2007(H4N8))


text: JCVI

text: live

characteristic: INSDC status

text: Pathogen.vi-cl

characteristic: NCBI submission model

text: Jonathan Runstadler MS, DVM, PhD

text: USA:Alaska

text: hatch year

characteristic: host-age

text: female

characteristic: host-sex

text: cloacal

text: Egg 1

text: Mallard

text: Viral, clinical or host-associated sample from Influenza A virus (A/mallard/Interior Alaska/7MP0510/2007(H3N6))


characteristic: External Id

text: JCVI

text: live

text: Pathogen.vi-cl

characteristic: NCBI submission package

text: Jonathan Runstadler MS, DVM, PhD

text: USA:Alaska

text: hatch year

text: female

text: cloacal

characteristic: isolation source

text: Egg 1

characteristic: passage-history

text: Northern shoveler

text: Viral, clinical or host-associated sample from Influenza A virus (A/northern shoveler/Interior Alaska/7MP1649/2007(H3N8))


text: JCVI

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.vi-cl

text: Jonathan Runstadler MS, DVM, PhD

text: USA:Alaska

text: hatch year

text: female

text: cloacal

text: Egg 1

text: American green-winged teal

characteristic: specific host

characteristic: subtype

text: Viral, clinical or host-associated sample from Influenza A virus (A/American green-winged teal/Interior Alaska/7MP1651/2007(H3N8))


text: JCVI

characteristic: INSDC last update

text: live

text: Pathogen.vi-cl

characteristic: SRA accession

text: Jonathan Runstadler MS, DVM, PhD

characteristic: collected-by

text: USA:Alaska

text: hatch year

text: male

text: cloacal

characteristic: organism

text: Egg 1

text: Northern shoveler

text: Viral, clinical or host-associated sample from Influenza A virus (A/northern shoveler/Alaska/7MP1669B/2007(H3N8))


text: JCVI

characteristic: INSDC secondary accession

text: live

text: Pathogen.vi-cl

text: Jonathan Runstadler MS, DVM, PhD

characteristic: collection date

text: USA:Alaska

characteristic: geo loc name

text: hatch year

text: female

text: cloacal

text: Egg 1

text: Northern shoveler

text: Viral, clinical or host-associated sample from Influenza A virus (A/northern shoveler/Interior Alaska/7MP1670/2007(H3N8))

characteristic: title


text: JCVI

text: live

characteristic: INSDC status

text: Pathogen.vi-cl

characteristic: NCBI submission model

text: Jonathan Runstadler MS, DVM, PhD

text: USA:Alaska

text: hatch year

characteristic: host-age

text: female

characteristic: host-sex

text: cloacal

text: Egg 1

text: American wigeon

text: Viral, clinical or host-associated sample from Influenza A virus (A/American widgeon/Interior Alaska/7MP1707/2007(H3N8))


characteristic: External Id

text: JCVI

text: live

text: Pathogen.vi-cl

characteristic: NCBI submission package

text: Jonathan Runstadler MS, DVM, PhD

text: USA:Alaska

text: hatch year

text: female

text: cloacal

characteristic: isolation source

text: Egg 1

characteristic: passage-history

text: Northern pintail

text: Viral, clinical or host-associated sample from Influenza A virus (A/northern pintail/Interior Alaska/7MP1644/2007(H4N6))


text: JCVI

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.vi-cl

text: Jonathan Runstadler MS, DVM, PhD

text: USA:Alaska

text: hatch year

text: male

text: cloacal

text: Egg 1

text: Mallard

characteristic: specific host

characteristic: subtype

text: Viral, clinical or host-associated sample from Influenza A virus (A/mallard/Interior Alaska/7MP1700/2007(H3N8))


text: JCVI

characteristic: INSDC last update

text: live

text: Pathogen.vi-cl

characteristic: SRA accession

text: Jonathan Runstadler MS, DVM, PhD

characteristic: collected-by

text: USA:Alaska

text: hatch year

text: female

text: cloacal

characteristic: organism

text: Egg 1

text: American green-winged teal

text: Viral, clinical or host-associated sample from Influenza A virus (A/American green-winged teal/Interior Alaska/7MP1049/2007(H3N8))


text: JCVI

characteristic: INSDC secondary accession

text: live

text: Pathogen.vi-cl

text: Jonathan Runstadler MS, DVM, PhD

characteristic: collection date

text: USA:Alaska

characteristic: geo loc name

text: hatch year

text: female

text: cloacal

text: Egg 1

text: Northern shoveler

text: Viral, clinical or host-associated sample from Influenza A virus (A/northern shoveler/Interior Alaska/7MP1033/2007(H3N8))

characteristic: title


text: JCVI

text: live

characteristic: INSDC status

text: Pathogen.vi-cl

characteristic: NCBI submission model

text: Jonathan Runstadler MS, DVM, PhD

text: USA:Alaska

text: hatch year

characteristic: host-age

text: male

characteristic: host-sex

text: cloacal

text: Egg 1

text: Mallard

text: Viral, clinical or host-associated sample from Influenza A virus (A/mallard/Interior Alaska/7MP1094/2007(H3N8))


characteristic: External Id

text: JCVI

text: live

text: Pathogen.vi-cl

characteristic: NCBI submission package

text: Jonathan Runstadler MS, DVM, PhD

text: USA:Alaska

text: hatch year

text: male

text: cloacal

characteristic: isolation source

text: Egg 2

characteristic: passage-history

text: Northern pintail

text: Viral, clinical or host-associated sample from Influenza A virus (A/northern pintail/Interior Alaska/7MP1067R1/2007(H4N5))


text: JCVI

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.vi-cl

text: Jonathan Runstadler MS, DVM, PhD

text: USA:Alaska

text: hatch year

text: female

text: cloacal

text: Egg 1

text: Mallard

characteristic: specific host

characteristic: subtype

text: Viral, clinical or host-associated sample from Influenza A virus (A/mallard/Interior Alaska/7MP1772/2007(H1N1))


text: JCVI

characteristic: INSDC last update

text: live

text: Pathogen.vi-cl

characteristic: SRA accession

text: Jonathan Runstadler MS, DVM, PhD

characteristic: collected-by

text: USA:Minto Flats, Interior Alaska

text: Hatch year

text: male

text: cloacal swab

characteristic: organism

text: E 1

text: mallard

text: Viral, clinical or host-associated sample from Influenza A virus (A/mallard/Interior Alaska/6MP0155/2006(H3N8))


text: JCVI

characteristic: INSDC secondary accession

text: live

text: Pathogen.vi-cl

text: Jonathan Runstadler MS, DVM, PhD

characteristic: collection date

text: USA:Minto Flats, Interior Alaska

characteristic: geo loc name

text: Hatch year

text: female

text: cloacal swab

text: E 2

text: mallard

text: Viral, clinical or host-associated sample from Influenza A virus (A/mallard/Interior Alaska/7MP1771R1/2007(H4N6))

characteristic: title


text: JCVI

text: live

characteristic: INSDC status

text: Pathogen.vi-cl

characteristic: NCBI submission model

text: Jonathan Runstadler MS, DVM, PhD

text: USA:Minto Flats, Interior Alaska

text: Hatch year

characteristic: host-age

text: female

characteristic: host-sex

text: cloacal swab

text: E 2

text: mallard

text: mixed

text: Viral, clinical or host-associated sample from Influenza A virus (A/mallard/Interior Alaska/6MP0017R1/2006(mixed))


characteristic: External Id

text: JCVI

text: live

text: Pathogen.vi-cl

characteristic: NCBI submission package

text: Jonathan Runstadler MS, DVM, PhD

text: USA:Minto Flats, Interior Alaska

text: Hatch year

text: female

text: cloacal swab

characteristic: isolation source

text: E 3

characteristic: passage-history

text: northern pintail

text: Viral, clinical or host-associated sample from Influenza A virus (A/northern pintail/Interior Alaska/7MP0345BR2/2007(H3N8))


text: JCVI

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.vi-cl

text: Jonathan Runstadler MS, DVM, PhD

text: USA:Minto Flats, Interior Alaska

text: Hatch year

text: female

text: cloacal swab

text: E 1

text: northern pintail

characteristic: specific host

characteristic: subtype

text: Viral, clinical or host-associated sample from Influenza A virus (A/northern pintail/Interior Alaska/7MP0509/2007(H3N8))


text: JCVI

characteristic: INSDC last update

text: live

text: Pathogen.vi-cl

characteristic: SRA accession

text: Jonathan Runstadler MS, DVM, PhD

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text: USA:Minto Flats, Interior Alaska

text: Hatch year

text: female

text: cloacal swab

characteristic: organism

text: E 1

text: American wigeon

text: Viral, clinical or host-associated sample from Influenza A virus (A/American wigeon/Interior Alaska/7MP1726/2007(H3N8))


text: JCVI

characteristic: INSDC secondary accession

text: live

text: Pathogen.vi-cl

text: Jonathan Runstadler MS, DVM, PhD

characteristic: collection date

text: USA:Minto Flats, Interior Alaska

characteristic: geo loc name

text: Hatch year

text: female

text: cloacal swab

text: E 1

text: northern shoveler

text: mixed

text: Viral, clinical or host-associated sample from Influenza A virus (A/northern shoveler/Interior Alaska/7MP1796/2007(mixed))

characteristic: title


text: JCVI

text: live

characteristic: INSDC status

text: Pathogen.vi-cl

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text: Jonathan Runstadler MS, DVM, PhD

text: USA:Minto Flats, Interior Alaska

text: Hatch year

characteristic: host-age

text: male

characteristic: host-sex

text: cloacal swab

text: E 1

text: mallard

text: Viral, clinical or host-associated sample from Influenza A virus (A/mallard/Interior Alaska/7MP0172/2007(H1N1))


characteristic: External Id

text: JCVI

text: live

text: Pathogen.vi-cl

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text: Hatch year

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text: northern pintail

text: Viral, clinical or host-associated sample from Influenza A virus (A/northern pintail/Interior Alaska/7MP0408/2007(H3N8))


text: JCVI

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.vi-cl

text: Jonathan Runstadler MS, DVM, PhD

text: USA:Minto Flats, Interior Alaska

text: cloacal swab

text: E 2

text: duck

characteristic: specific host

characteristic: subtype

text: Viral, clinical or host-associated sample from Influenza A virus (A/duck/Interior Alaska/7MP1591R1/2007(H3N8))


text: JCVI

characteristic: INSDC last update

text: live

text: Pathogen.vi-cl

characteristic: SRA accession

text: Jonathan Runstadler MS, DVM, PhD

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text: USA:Minto Flats, Interior Alaska

text: Hatch year

text: female

text: cloacal swab

characteristic: organism

text: E 1

text: mallard

text: Viral, clinical or host-associated sample from Influenza A virus (A/mallard/Interior Alaska/7MP0747/2007(H1N1))


text: JCVI

characteristic: INSDC secondary accession

text: live

text: Pathogen.vi-cl

text: Jonathan Runstadler MS, DVM, PhD

characteristic: collection date

text: USA:Minto Flats, Interior Alaska

characteristic: geo loc name

text: Hatch year

text: female

text: cloacal swab

text: E 1

text: northern shoveler

text: Viral, clinical or host-associated sample from Influenza A virus (A/northern shoveler/Interior Alaska/7MP0953/2007(H3N8))

characteristic: title


text: JCVI

text: live

characteristic: INSDC status

text: Pathogen.vi-cl

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text: Jonathan Runstadler MS, DVM, PhD

text: USA:Minto Flats, Interior Alaska

text: Hatch year

characteristic: host-age

text: male

characteristic: host-sex

text: cloacal swab

text: E 1

text: mallard

text: mixed

text: Viral, clinical or host-associated sample from Influenza A virus (A/mallard/Interior Alaska/7MP0956/2007(mixed))


characteristic: External Id

text: JCVI

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text: Pathogen.vi-cl

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text: Jonathan Runstadler MS, DVM, PhD

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text: cloacal swab

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text: duck

text: Viral, clinical or host-associated sample from Influenza A virus (A/duck/Interior Alaska/7MP1570/2007(H4N6))


text: JCVI

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.vi-cl

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text: cloacal swab

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text: duck

characteristic: specific host

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text: Viral, clinical or host-associated sample from Influenza A virus (A/duck/Interior Alaska/7MP1582/2007(H1N1))


text: JCVI

characteristic: INSDC last update

text: live

text: Pathogen.vi-cl

characteristic: SRA accession

text: Jonathan Runstadler MS, DVM, PhD

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text: USA:Minto Flats, Interior Alaska

text: cloacal swab

characteristic: organism

text: E 1

text: duck

text: Viral, clinical or host-associated sample from Influenza A virus (A/duck/Interior Alaska/7MP1598/2007(H3N8))


text: JCVI

characteristic: INSDC secondary accession

text: live

text: Pathogen.vi-cl

text: Jonathan Runstadler MS, DVM, PhD

characteristic: collection date

text: USA:Minto Flats, Interior Alaska

characteristic: geo loc name

text: Hatch year

text: female

text: cloacal swab

text: E 1

text: northern shoveler

text: Viral, clinical or host-associated sample from Influenza A virus (A/northern shoveler/Interior Alaska/7MP1667/2007(H3N8))

characteristic: title


text: JCVI

text: live

characteristic: INSDC status

text: Pathogen.vi-cl

characteristic: NCBI submission model

text: Jonathan Runstadler MS, DVM, PhD

text: USA:Minto Flats, Interior Alaska

text: Hatch year

characteristic: host-age

text: male

characteristic: host-sex

text: cloacal swab

text: E 1

text: northern pintail

text: mixed

text: Viral, clinical or host-associated sample from Influenza A virus (A/northern pintail/Interior Alaska/7MP1702/2007(mixed))


characteristic: External Id

text: JCVI

text: live

text: Pathogen.vi-cl

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text: Jonathan Runstadler MS, DVM, PhD

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text: Hatch year

text: female

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characteristic: isolation source

text: E 1

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text: mallard

text: Viral, clinical or host-associated sample from Influenza A virus (A/mallard/Interior Alaska/7MP1720/2007(H3N8))


text: JCVI

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.vi-cl

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text: Hatch year

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text: northern pintail

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text: Viral, clinical or host-associated sample from Influenza A virus (A/northern pintail/Interior Alaska/7MP1822/2007(H3N8))


text: JCVI

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text: live

text: Pathogen.vi-cl

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text: Jonathan Runstadler MS, DVM, PhD

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text: Hatch year

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text: E 1

text: mallard

text: Viral, clinical or host-associated sample from Influenza A virus (A/mallard/Interior Alaska/7MP1835/2007(H3N8))


text: JCVI

characteristic: INSDC secondary accession

text: live

text: Pathogen.vi-cl

text: Jonathan Runstadler MS, DVM, PhD

characteristic: collection date

text: USA:Minto Flats, Interior Alaska

characteristic: geo loc name

text: After hatch year

text: female

text: cloacal swab

text: E 1

text: northern pintail

text: Viral, clinical or host-associated sample from Influenza A virus (A/northern pintail/Interior Alaska/7MP2228/2007(H3N8))

characteristic: title


text: JCVI

text: live

characteristic: INSDC status

text: Pathogen.vi-cl

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text: Jonathan Runstadler MS, DVM, PhD

text: USA:Minto Flats, Interior Alaska

text: Hatch year

characteristic: host-age

text: female

characteristic: host-sex

text: cloacal swab

text: E 1

text: green-winged teal

text: Viral, clinical or host-associated sample from Influenza A virus (A/green-winged teal/Interior Alaska/6MP0736/2006(H3N8))


characteristic: External Id

text: JCVI

text: live

text: Pathogen.vi-cl

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text: After hatch year

text: male

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text: mallard

text: Viral, clinical or host-associated sample from Influenza A virus (A/mallard/Interior Alaska/6MP0745/2006(H4N6))


text: JCVI

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.vi-cl

text: Jonathan Runstadler MS, DVM, PhD

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text: After hatch year

text: male

text: cloacal swab

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text: mallard

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text: mixed

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text: Viral, clinical or host-associated sample from Influenza A virus (A/mallard/Interior Alaska/6MP0747/2006(mixed))


text: JCVI

characteristic: INSDC last update

text: live

text: Pathogen.vi-cl

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text: Jonathan Runstadler MS, DVM, PhD

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text: USA:Minto Flats, Interior Alaska

text: Hatch year

text: female

text: cloacal swab

characteristic: organism

text: E 1

text: mallard

text: Viral, clinical or host-associated sample from Influenza A virus (A/mallard/Interior Alaska/6MP0758/2006(H10N8))


text: JCVI

characteristic: INSDC secondary accession

text: live

text: Pathogen.vi-cl

text: Jonathan Runstadler MS, DVM, PhD

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text: USA:Minto Flats, Interior Alaska

characteristic: geo loc name

text: Hatch year

text: female

text: cloacal swab

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text: northern pintail

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text: Viral, clinical or host-associated sample from Influenza A virus (A/northern pintail/Interior Alaska/6MP0817/2006(mixed))

characteristic: title


text: JCVI

text: live

characteristic: INSDC status

text: Pathogen.vi-cl

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text: Jonathan Runstadler MS, DVM, PhD

text: USA:Minto Flats, Interior Alaska

text: Hatch year

characteristic: host-age

text: female

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text: cloacal swab

text: E 1

text: northern pintail

text: Viral, clinical or host-associated sample from Influenza A virus (A/northern pintail/Interior Alaska/6MP0846/2006(H3))


characteristic: External Id

text: JCVI

text: live

text: Pathogen.vi-cl

characteristic: NCBI submission package

text: Jonathan Runstadler MS, DVM, PhD

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text: After hatch year

text: female

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text: mallard

text: Viral, clinical or host-associated sample from Influenza A virus (A/mallard/Interior Alaska/6MP0905/2006(H10N9))


text: JCVI

characteristic: INSDC center name

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text: live

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text: Jonathan Runstadler MS, DVM, PhD

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text: Hatch year

text: female

text: cloacal swab

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text: green-winged teal

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text: Viral, clinical or host-associated sample from Influenza A virus (A/green-winged teal/Interior Alaska/6MP0909/2006(H3N8))


text: JCVI

characteristic: INSDC last update

text: live

text: Pathogen.vi-cl

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text: USA:Minto Flats, Interior Alaska

text: Hatch year

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text: E 1

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text: Viral, clinical or host-associated sample from Influenza A virus (A/mallard/Interior Alaska/6MP0915/2006(H3N8))


text: JCVI

characteristic: INSDC secondary accession

text: live

text: Pathogen.vi-cl

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characteristic: geo loc name

text: Hatch year

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text: mallard

text: Viral, clinical or host-associated sample from Influenza A virus (A/mallard/Interior Alaska/6MP0975/2006(H3N8))

characteristic: title


text: JCVI

text: live

characteristic: INSDC status

text: Pathogen.vi-cl

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text: Jonathan Runstadler MS, DVM, PhD

text: USA:Minto Flats, Interior Alaska

text: Hatch year

characteristic: host-age

text: female

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text: cloacal swab

text: E 1

text: mallard

text: Viral, clinical or host-associated sample from Influenza A virus (A/mallard/Interior Alaska/6MP0991/2006(H3N2))


characteristic: External Id

text: JCVI

text: live

text: Pathogen.vi-cl

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text: Jonathan Runstadler MS, DVM, PhD

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text: Hatch year

text: male

text: cloacal swab

characteristic: isolation source

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characteristic: passage-history

text: mallard

text: Viral, clinical or host-associated sample from Influenza A virus (A/mallard/Interior Alaska/6MP0992/2006(H3N2))


text: JCVI

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.vi-cl

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text: Hatch year

text: male

text: cloacal swab

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text: northern shoveler

characteristic: specific host

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text: Viral, clinical or host-associated sample from Influenza A virus (A/northern shoveler/Interior Alaska/6MP1287/2006(H3N8))


text: JCVI

characteristic: INSDC last update

text: live

text: Pathogen.vi-cl

characteristic: SRA accession

text: Jonathan Runstadler MS, DVM, PhD

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text: USA:Minto Flats, Interior Alaska

text: Hatch year

text: female

text: cloacal swab

characteristic: organism

text: E 1

text: green-winged teal

text: Viral, clinical or host-associated sample from Influenza A virus (A/green-winged teal/Interior Alaska/6MP1312/2006(H3N8))


text: JCVI

characteristic: INSDC secondary accession

text: live

text: Pathogen.vi-cl

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text: USA:Minto Flats, Interior Alaska

characteristic: geo loc name

text: Hatch year

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text: cloacal swab

text: E 1

text: northern pintail

text: Viral, clinical or host-associated sample from Influenza A virus (A/northern pintail/Interior Alaska/6MP0814/2006(H3N8))

characteristic: title


text: JCVI

text: live

characteristic: INSDC status

text: Pathogen.vi-cl

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text: Jonathan Runstadler MS, DVM, PhD

text: USA:Minto Flats, Interior Alaska

text: Hatch year

characteristic: host-age

text: female

characteristic: host-sex

text: cloacal swab

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text: green-winged teal

text: Viral, clinical or host-associated sample from Influenza A virus (A/green-winged teal/Interior Alaska/6MP1077/2006(H3N8))


characteristic: External Id

text: JCVI

text: live

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text: Hatch year

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text: northern shoveler

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text: JCVI

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text: live

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text: Hatch year

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text: green-winged teal

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text: Viral, clinical or host-associated sample from Influenza A virus (A/green-winged teal/Interior Alaska/6MP1330/2006(H3N8))


text: JCVI

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text: live

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text: Hatch year

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text: E 1

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text: Viral, clinical or host-associated sample from Influenza A virus (A/northern shoveler/Interior Alaska/6MP1339/2006(H3N8))


text: JCVI

characteristic: INSDC secondary accession

text: live

text: Pathogen.vi-cl

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characteristic: collection date

text: USA:Minto Flats, Interior Alaska

characteristic: geo loc name

text: After hatch year

text: male

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text: mallard

text: Viral, clinical or host-associated sample from Influenza A virus (A/mallard/Interior Alaska/6MP0050R1/2006(H3N8))

characteristic: title


text: JCVI

text: live

characteristic: INSDC status

text: Pathogen.vi-cl

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text: Jonathan Runstadler MS, DVM, PhD

text: USA:Minto Flats, Interior Alaska

text: Hatch year

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text: female

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text: cloacal swab

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text: mallard

text: Viral, clinical or host-associated sample from Influenza A virus (A/mallard/Interior Alaska/6MP0272/2006(H3N8))


characteristic: External Id

text: JCVI

text: live

text: Pathogen.vi-cl

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text: Hatch year

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text: northern pintail

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text: JCVI

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characteristic: INSDC first public

text: live

text: Pathogen.vi-cl

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text: Hatch year

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text: northern pintail

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text: Viral, clinical or host-associated sample from Influenza A virus (A/northern pintail/Interior Alaska/6MP0804/2006(mixed))


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text: live

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text: Viral, clinical or host-associated sample from Influenza A virus (A/mallard/Interior Alaska/6MP0891/2006(H4N6))


text: JCVI

characteristic: INSDC secondary accession

text: live

text: Pathogen.vi-cl

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characteristic: geo loc name

text: Hatch year

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text: mallard

text: Viral, clinical or host-associated sample from Influenza A virus (A/mallard/Interior Alaska/6MP0952/2006(H3N6))

characteristic: title


text: JCVI

text: live

characteristic: INSDC status

text: Pathogen.vi-cl

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text: Jonathan Runstadler MS, DVM, PhD

text: USA:Minto Flats, Interior Alaska

text: Hatch year

characteristic: host-age

text: male

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text: cloacal swab

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text: mallard

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text: Viral, clinical or host-associated sample from Influenza A virus (A/mallard/Interior Alaska/6MP0988/2006(mixed))


characteristic: External Id

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text: Pathogen.vi-cl

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text: Jonathan Runstadler MS, DVM, PhD

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text: Hatch year

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text: E 1

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text: green-winged teal

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text: JCVI

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text: live

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text: Hatch year

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text: Viral, clinical or host-associated sample from Influenza A virus (A/mallard/Interior Alaska/6MP1142/2006(H3N6))


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text: live

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text: Hatch year

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characteristic: organism

text: E 1

text: northern pintail

text: Viral, clinical or host-associated sample from Influenza A virus (A/northern pintail/Interior Alaska/6MP0964/2006(H3N8))


text: JCVI

characteristic: INSDC secondary accession

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characteristic: title


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characteristic: title


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characteristic: passage-history

text: mallard

text: Viral, clinical or host-associated sample from Influenza A virus (A/mallard/Interior Alaska/8BM3596/2008(H3N8))


text: JCVI

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.vi-cl

text: Jonathan Runstadler MS, DVM, PhD

text: USA:Minto Flats, Interior Alaska

text: Hatch year

text: male

text: cloacal swab

text: northern pintail

characteristic: specific host

characteristic: subtype

text: Viral, clinical or host-associated sample from Influenza A virus (A/northern pintail/Interior Alaska/8BM3608/2008(H4N6))