text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: 0-1h old embryo

text: 60S fraction

text: Drosophila melanogaster


status: PUBLIC

characteristic: External Id

text: Non-coding, Molecular Biology and Genetics, Izmir Institute of Technology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: 0-1h old embryo

tag: attribute

characteristic: age

text: 80S (monosome) fraction

characteristic: fraction

text: Drosophila melanogaster

characteristic: organism

characteristic: title


text: live

text: Generic

text: 0-1h old embryo

text: Polysome fraction

text: Drosophila melanogaster


text: live

text: Generic

text: 7-8h old embryo

text: mRNP fraction

text: Drosophila melanogaster


text: live

text: Generic

text: 7-8h old embryo

text: 60S fraction

text: Drosophila melanogaster


text: live

text: Generic

text: 7-8h old embryo

text: 80S (monosome) fraction

text: Drosophila melanogaster


text: live

text: Generic

text: 7-8h old embryo

text: Polysome fraction

text: Drosophila melanogaster


text: live

text: Generic

text: 0-1h old embryo

text: Total RNA

text: Drosophila melanogaster


text: live

text: Generic

text: 7-8h old embryo

text: Total RNA

text: Drosophila melanogaster


text: DOE Joint Genome Institute

text: live

text: Generic

text: Svalbard Archipelago station 1 sample NOR 08_45m

characteristic: description

text: marine metagenome

characteristic: sample number

text: Generic sample from marine metagenome


NDIOP

text: URMITE CNRS UMR 6236

text: live

text: Generic

text: human gut metagenome

text: 16S amplicon pyrosequencing of gut microbiota of senegalese stool from the NDIOP village


DIELMO

text: URMITE CNRS UMR 6236

text: live

text: Generic

text: human gut metagenome

text: 16S Amplicon pyrosequencing of gut microbiota of a senegalese stool from Dielmo village


OBESE

text: URMITE CNRS UMR 6236

text: live

text: Generic

text: human gut metagenome

text: 16S amplicon pyrosequencing of gut microbiota from obese patient stool


Industrial Yeast Pan-Genome

text: Stanford University

text: live

text: Generic

text: Saccharomyces cerevisiae

text: Analysis of the Saccharomyces cerevisiae Pan-Genome Reveals a Pool of Copy Number Variants Distributed Throughout Diverse Yeast Strains From Differing Industrial Environments


text: modENCODE DCC, Ontario Institute for Cancer Research

text: live

text: Generic

characteristic: developmental stage

characteristic: genotype

text: Caenorhabditis elegans

text: hermaphrodite

characteristic: sex

text: OP179(official name : OP179 genotype : unc-119(ed3) III; wgIs179 [unc-119(+) gei-11::TY1::EGFP::3xFLAG] outcross : 3 mutagen : Bombard tags : GFP::3xFlag description : This strain's transgene was constructed by Mihail Sarov at the Max Planck Institute for Cell Biology in Tubiginen using Tony Hyman's recombineering pipeline. The resulting plasmid was used for biolistic transformation of an unc-119(ed3) strain. The GEI-11::EGFP fusion protein is expressed in the correct gei-11 spatio-temporal expression pattern. This strain was used for ChIP-seq experiments to map the in vivo binding sites for the GEI-11 transcription factor. made_by : R. Waterston )

characteristic: strain

text: Snyder_GEI-11_Input_L3_rep1 extraction1_seq1 aliquote 1


text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: unc-119(ed3) III; wgIs179 [unc-119(+) gei-11::TY1::EGFP::3xFLAG]

text: Caenorhabditis elegans

text: hermaphrodite

text: Snyder_GEI-11_Input_L3_rep2 extraction1_seq1 aliquote 1


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Caenorhabditis elegans

text: hermaphrodite

text: Snyder_GEI-11_GFP_L3_rep1 extraction1_seq1 aliquote 1


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Caenorhabditis elegans

text: hermaphrodite

text: Snyder_GEI-11_GFP_L3_rep2 extraction1_seq1 aliquote 1


text: live

text: Generic

text: unc-119(ed3); wgIs174(ces-1::TY1 EGFP FLAG;unc-119)

text: Caenorhabditis elegans

characteristic: organism

text: hermaphrodite

text: OP174(official name : OP174 genotype : unc-119(ed3); wgIs174(ces-1::TY1 EGFP FLAG; unc-119) outcross : 3 mutagen : Bombard tags : GFP::3xFlag description : This strain's transgene was constructed by Mihail Sarov at the Max Planck Institute for Cell Biology in Tubiginen using Tony Hyman's recombineering pipeline. The resulting plasmid was used for biolistic transformation of an unc-119(ed3) strain. The CES-1::EGFP fusion protein is expressed in the correct ces-1 spatio-temporal expression pattern. This strain was used for ChIP-seq experiments to map the in vivo binding sites for the CES-1 transcription factor. made_by : S. Kim )

text: Snyder_CES1_Input_L3_rep1 extraction1_seq1 aliquote 1


text: live

text: Generic

text: Caenorhabditis elegans

text: hermaphrodite

text: Snyder_CES1_Input_L3_rep2 extraction1_seq1 aliquote 1

characteristic: title


text: live

text: Generic

text: Caenorhabditis elegans

text: hermaphrodite

text: Snyder_CES1_GFP_L3_rep1 extraction1_seq1 aliquote 1


text: live

text: Generic

text: Caenorhabditis elegans

text: hermaphrodite

text: Snyder_CES1_GFP_L3_rep2 extraction1_seq1 aliquote 1


text: DOE Joint Genome Institute

text: live

text: Generic

text: Baltic Sea site KBB sample SWE 26_20.5m

characteristic: description

text: marine metagenome

text: Generic sample from marine metagenome


text: Broad Institute

text: live

text: Generic

characteristic: collection date

text: United Kingdom

text: feces

characteristic: isolation-source

text: Enterococcus faecium EnGen0005

text: Genome Sequencing of Enterococcus

characteristic: project name

text: Chicken

characteristic: specific host

text: Generic sample from Enterococcus faecium E0045


text: Broad Institute

text: live

text: Generic

text: United Kingdom

text: Hospitalized patient

characteristic: isolation source

text: Enterococcus faecium EnGen0016

text: Genome Sequencing of Enterococcus

characteristic: strain

text: Generic sample from Enterococcus faecium E1392


text: Broad Institute

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Belgium

text: rumen

text: Enterococcus faecium EnGen0009

text: Genome Sequencing of Enterococcus

text: Bison

text: Generic sample from Enterococcus faecium E1573


characteristic: External Id

text: Broad Institute

text: live

text: Generic

characteristic: SRA accession

text: Belgium

text: Enterococcus faecium EnGen0020

text: Genome Sequencing of Enterococcus

text: Dog

text: Generic sample from Enterococcus faecium E1574


text: Broad Institute

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Belgium

text: Enterococcus faecium EnGen0001

text: Genome Sequencing of Enterococcus

text: Chicken

text: Generic sample from Enterococcus faecium E1575


text: Broad Institute

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: South Africa

text: Caecum

text: Enterococcus faecium EnGen0018

text: Genome Sequencing of Enterococcus

text: Ostrich

text: Generic sample from Enterococcus faecium E1576


text: Broad Institute

text: live

characteristic: INSDC status

text: Generic

text: Norway

characteristic: geo loc name

text: cheese

text: Enterococcus faecium EnGen0028

characteristic: organism

text: Genome Sequencing of Enterococcus

text: Generic sample from Enterococcus faecium E1604


text: Broad Institute

text: live

text: Generic

characteristic: collection date

text: Norway

text: Fish burger

text: Enterococcus faecium EnGen0029

text: Genome Sequencing of Enterococcus

text: Generic sample from Enterococcus faecium E1613

characteristic: title


text: Broad Institute

text: live

text: Generic

text: Netherlands

text: Enterococcus faecium EnGen0032

text: Genome Sequencing of Enterococcus

characteristic: project name

text: Mouse

text: Generic sample from Enterococcus faecium E1622


text: Broad Institute

text: live

text: Generic

text: Netherlands

text: feces

characteristic: isolation-source

text: Enterococcus faecium EnGen0010

text: Genome Sequencing of Enterococcus

text: Turkey

characteristic: specific host

text: Generic sample from Enterococcus faecium E0164


text: Broad Institute

text: live

text: Generic

text: Netherlands

text: river water

characteristic: isolation source

text: Enterococcus faecium EnGen0039

text: Genome Sequencing of Enterococcus

characteristic: strain

text: Generic sample from Enterococcus faecium E1630


text: Broad Institute

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Netherlands

text: river water

text: Enterococcus faecium EnGen0040

text: Genome Sequencing of Enterococcus

text: Generic sample from Enterococcus faecium E1634


characteristic: External Id

text: Broad Institute

text: live

text: Generic

characteristic: SRA accession

text: Brazil

text: feces

text: Enterococcus faecium EnGen0023

text: Genome Sequencing of Enterococcus

text: Hospitalized patient

text: Generic sample from Enterococcus faecium E1685


text: Broad Institute

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Brazil

text: feces

text: Enterococcus sp. EnGen0037

text: Genome Sequencing of Enterococcus

text: Hospitalized patient

text: Generic sample from Enterococcus faecium E1695


text: Broad Institute

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Germany

text: Hospitalized patient

text: Enterococcus faecium EnGen0026

text: Genome Sequencing of Enterococcus

text: Generic sample from Enterococcus faecium E2039


text: Broad Institute

text: live

characteristic: INSDC status

text: Generic

text: Denmark

characteristic: geo loc name

text: Poultry

text: Enterococcus faecium EnGen0044

text: Genome Sequencing of Enterococcus

text: Generic sample from Enterococcus faecium E2071


text: Broad Institute

text: live

text: Generic

characteristic: collection date

text: Netherlands

text: feces

text: Enterococcus faecium EnGen0022

characteristic: organism

text: Genome Sequencing of Enterococcus

text: Turkey

text: Generic sample from Enterococcus faecium E0269


text: Broad Institute

text: live

text: Generic

text: Netherlands

text: Enterococcus faecium EnGen0043

text: Genome Sequencing of Enterococcus

characteristic: project name

text: Chicken

text: Generic sample from Enterococcus faecium E2134

characteristic: title


text: Broad Institute

text: live

text: Generic

text: United Kingdom

text: blood

characteristic: isolation-source

text: Enterococcus faecium EnGen0053

text: Genome Sequencing of Enterococcus

text: Hospitalized patient

characteristic: specific host

text: Generic sample from Enterococcus faecium E4170


text: Broad Institute

text: live

text: Generic

text: France

text: feces

text: Enterococcus sp. EnGen0055

text: Genome Sequencing of Enterococcus

text: Non-hospitalized person

characteristic: strain

text: Generic sample from Enterococcus faecium E4180


text: Broad Institute

text: live

text: Generic

characteristic: NCBI submission model

text: Sweden

text: Enterococcus faecium EnGen0048

text: Genome Sequencing of Enterococcus

text: Chicken

text: Generic sample from Enterococcus faecium E4215


text: Broad Institute

text: live

text: Generic

characteristic: NCBI submission package

text: Germany

text: Hospitalized patient

characteristic: isolation source

text: Enterococcus faecium EnGen0051

text: Genome Sequencing of Enterococcus

text: Generic sample from Enterococcus faecium E1644


characteristic: External Id

text: Broad Institute

text: live

text: Generic

characteristic: SRA accession

text: Hungary

text: Hospitalized patient

text: Enterococcus faecium EnGen0050

text: Genome Sequencing of Enterococcus

text: Generic sample from Enterococcus faecium E2369


text: Broad Institute

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Denmark

text: feces

text: Enterococcus faecium EnGen0057

text: Genome Sequencing of Enterococcus

text: Dog

text: Generic sample from Enterococcus faecium E4389


text: Broad Institute

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Latvia

text: Hospitalized patient

text: Enterococcus faecium EnGen0045

text: Genome Sequencing of Enterococcus

text: Generic sample from Enterococcus faecium E6012


text: Broad Institute

text: live

characteristic: INSDC status

text: Generic

text: Portugal

text: Hospitalized patient

text: Enterococcus faecium EnGen0049

text: Genome Sequencing of Enterococcus

text: Generic sample from Enterococcus faecium E6045


text: Broad Institute

text: live

text: Generic

text: Lactococcus garvieae ATCC 49156

text: Genome Sequencing of Enterococcus

text: ATCC 49156

text: Generic sample from Lactococcus garvieae ATCC 49156

text: type strain of Enterococcus seriolicida Kusuda et al. 1991

characteristic: type material


text: Broad Institute

text: live

text: Generic

text: Enterococcus faecalis V583

characteristic: organism

text: Genome Sequencing of Enterococcus

text: Generic sample from Enterococcus faecalis V583


text: Broad Institute

text: live

text: Generic

text: Belgium

text: Enterococcus faecium EnGen0014

text: Genome Sequencing of Enterococcus

characteristic: project name

text: Pig

text: Generic sample from Enterococcus faecium E0679


text: Broad Institute

text: live

text: Generic

text: stool (prior to bacteremia)

text: Enterococcus faecium EnGen0375

text: Genome Sequencing of Enterococcus

text: Homo sapiens

text: Generic sample from Enterococcus faecium Efm_NY2-1

characteristic: title


text: Broad Institute

text: live

text: Generic

text: blood culture, Daptomycin (S)- day 1 of bacteremia

characteristic: isolation-source

text: Enterococcus faecium EnGen0376

text: Genome Sequencing of Enterococcus

text: Homo sapiens

text: Generic sample from Enterococcus faecium EnGen0376


text: Broad Institute

text: live

text: Generic

text: blood culture Daptomycin (R)- day 5 of bacteremia

text: Enterococcus faecium EnGen0377

text: Genome Sequencing of Enterococcus

text: Homo sapiens

characteristic: specific host

text: Generic sample from Enterococcus faecium Efm_NY2-3


text: Broad Institute

text: live

text: Generic

text: Enterococcus dispar ATCC 51266

text: Genome Sequencing of Enterococcus

text: ATCC 51266

characteristic: strain

text: Generic sample from Enterococcus dispar ATCC 51266

text: type strain of Enterococcus dispar


text: Broad Institute

text: live

text: Generic

characteristic: NCBI submission model

text: Enterococcus durans ATCC 6056

text: Genome Sequencing of Enterococcus

text: ATCC 6056

text: Generic sample from Enterococcus durans ATCC 6056


text: Broad Institute

text: live

text: Generic

characteristic: NCBI submission package

text: Enterococcus avium ATCC 14025

text: Genome Sequencing of Enterococcus

text: ATCC 14025

text: Generic sample from Enterococcus avium ATCC 14025

text: type strain of Enterococcus avium


text: Broad Institute

text: live

text: Generic

text: Genome Sequencing of Enterococcus

text: ATCC 51263

text: Generic sample from Enterococcus columbae DSM 7374 = ATCC 51263

text: type strain of Enterococcus columbae


text: Broad Institute

text: live

text: Generic

text: Enterococcus sulfureus ATCC 49903

text: Genome Sequencing of Enterococcus

text: ATCC 49903

text: Generic sample from Enterococcus sulfureus ATCC 49903

text: type strain of Enterococcus sulfureus


text: Broad Institute

text: live

text: Generic

text: Germany

text: Enterococcus faecium EnGen0019

text: Genome Sequencing of Enterococcus

text: Pig

text: Generic sample from Enterococcus faecium E0680


text: Broad Institute

text: live

text: Generic

text: Spain

text: Enterococcus faecium EnGen0008

text: Genome Sequencing of Enterococcus

text: Pig

text: Generic sample from Enterococcus faecium E0688


text: Baylor College of Medicine

text: live

text: Generic

text: Manduca sexta

characteristic: description

text: Manduca sexta

text: Generic sample from Manduca sexta


characteristic: External Id

text: National Research Council Canada - Plant Biotechnology Institute

text: live

text: Generic

text: Hippophae rhamnoides

text: Sea Buckthorn (Hippophae rhamnoides L.) mature seed transcriptome


text: University of California at Berkeley

text: live

text: Generic

text: 21 day old

characteristic: dev-stage

text: Puccinellia distans

text: shoots and roots

characteristic: tissue-type

text: High boron treated Puccinellia distans shoots and roots cDNA library


text: Institute of Immunology, PLA, Third Military Medical University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: SRA accession

text: Abcam

characteristic: antibody vendor

characteristic: cell line

text: human hepatocellular liver carcinoma cells

characteristic: cell type

characteristic: chip antibody

text: Homo sapiens

text: HepG2 cells, H3K4me3 ChIP


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Abcam

text: Homo sapiens

characteristic: organism

text: HepG2 cells, H3K27me3 ChIP

characteristic: title


text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Abcam

text: Homo sapiens

text: HepG2.2.15 cells, H3K4me3 ChIP


characteristic: External Id

text: live

text: Generic

text: Abcam

text: Homo sapiens

text: HepG2.2.15 cells, H3K27me3 ChIP


text: live

text: Generic

text: Homo sapiens

text: HepG2 cells


text: live

text: Generic

text: Homo sapiens

text: HepG2.2.15 cells


text: DOE Joint Genome Institute

text: live

text: Generic

text: Wetland Surface Sediment Feb2011 Site L1 Bulk

characteristic: description

text: soil metagenome

characteristic: sample number

text: Generic sample from soil metagenome


text: DOE Joint Genome Institute

characteristic: INSDC center name

text: live

text: Generic

text: Tierra del Fuego site OR sample ARG 04_12.3m

text: marine metagenome

text: Generic sample from marine metagenome


text: DOE Joint Genome Institute

characteristic: INSDC first public

text: live

text: Generic

text: Laccaria bicolor 81306

text: Laccaria bicolor 81306

characteristic: strain

text: Generic sample from Laccaria bicolor 81306


cotton transcriptome comparison

text: New Mexico State Unibversity

text: live

text: Generic

characteristic: SRA accession

text: 10-DPA ovaries per replicate were collected from field-grown Pima Phy 76 and Acala 1517-99 plants.The two genotypes were arranged in a paired randomized complete block design with three replicates. Total RNA of each genotype was extracted from pooled ovaries from the three replicates using the hot borate method with minor modifications (Wan and Wilkins 1994).

text: Gossypium hirsutum

text: 454 sequences for Phy76


MeDIP-seq

text: National Centre for Biological Sciences

text: live

text: Generic

text: Flowcell Lane strain timepoint barcode 70CA2AAXX 1 wildtype exponential AGTCTT 70CA2AAXX 1 wildtype late-exponential GGAACT 70CA2AAXX 1 wildtype transition GCGTGG 70CA2AAXX 1 wildtype stationary CTAAGG 70CA2AAXX 1 dcm- exponential TCCGTC 70CA2AAXX 2 dcm- late-exponential AAGTGC 70CA2AAXX 2 dcm- transition CATTCA 70CA2AAXX 2 dcm- stationary TTCGAA

text: Escherichia coli

text: Methylated DNA Immunoprecipitation - sequencing for wildtype and dcm- strains of MG1655


text: Broad Institute

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: human gut metagenome

characteristic: sample name

text: Generic sample from unclassified Bacteria (miscellaneous)


text: Broad Institute

text: live

text: Generic

text: Generic

text: Vibrio cholerae C6706

text: Generic sample from Vibrio cholerae C6706


text: Seoul National University

text: live

text: Generic

text: Homo sapiens

text: 8h (G2/M phase)


text: Seoul National University

text: live

text: Generic

text: Homo sapiens

text: 10h (early G1 phase)


text: Seoul National University

text: live

text: Generic

text: Homo sapiens

text: 14h (late G1 phase)


text: Seoul National University

text: live

text: Generic

text: Homo sapiens

text: 16h (S phase)


text: Seoul National University

text: live

text: Generic

text: Homo sapiens

text: 18h (S phase)


text: Seoul National University

text: live

text: Generic

text: Homo sapiens

text: 20h (S phase)


text: DOE Joint Genome Institute

text: live

text: Generic

text: Tierra del Fuego site MC sample ARG 03_11.3m

text: marine metagenome

text: Generic sample from marine metagenome


red crucian carp

text: Hunan Normal University

text: live

text: Generic

text: Carassius auratus red var.

text: Characterization and comparative profiling of RNA transcriptomes in red crucian carp , common carp and tetraploid carp.


text: Davide Ruggero, Urology, UCSF

text: live

text: Generic

characteristic: cell line

text: Homo sapiens

text: polyA RNA

characteristic: sample type

text: PC3 human prostate cancer cells

text: mRNA-seq for vehicle treated PC3 cells, replicate #1.

text: vehicle

characteristic: treatment


text: Davide Ruggero, Urology, UCSF

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Homo sapiens

text: ribosome protected RNA

text: PC3 human prostate cancer cells

text: Footprint for vehicle treated PC3 cells, replicate #1.

text: vehicle


text: Davide Ruggero, Urology, UCSF

text: live

text: Generic

characteristic: NCBI submission model

text: Homo sapiens

characteristic: organism

text: polyA RNA

text: PC3 human prostate cancer cells

text: mRNA-seq for rapamycin treated PC3 cells, replicate #1.

characteristic: title

text: rapamycin


characteristic: External Id

text: Davide Ruggero, Urology, UCSF

text: live

text: Generic

characteristic: NCBI submission package

text: Homo sapiens

text: ribosome protected RNA

text: PC3 human prostate cancer cells

text: Footprint for rapamycin treated PC3 cells, replicate #1.

text: rapamycin


text: Davide Ruggero, Urology, UCSF

characteristic: INSDC center name

text: live

text: Generic

text: Homo sapiens

text: polyA RNA

text: PC3 human prostate cancer cells

text: mRNA-seq for PP242 treated PC3 cells, replicate #1.


text: Davide Ruggero, Urology, UCSF

characteristic: INSDC first public

text: live

text: Generic

text: Homo sapiens

text: ribosome protected RNA

text: PC3 human prostate cancer cells

text: Footprint for PP242 treated PC3 cells, replicate #1.


text: Davide Ruggero, Urology, UCSF

text: live

text: Generic

text: Homo sapiens

text: polyA RNA

text: PC3 human prostate cancer cells

text: mRNA-seq for vehicle treated PC3 cells, replicate #2.

text: vehicle


text: Davide Ruggero, Urology, UCSF

text: live

text: Generic

text: Homo sapiens

text: ribosome protected RNA

text: PC3 human prostate cancer cells

text: Footprint for vehicle treated PC3 cells, replicate #2.

text: vehicle


text: Davide Ruggero, Urology, UCSF

text: live

text: Generic

text: Homo sapiens

text: polyA RNA

text: PC3 human prostate cancer cells

text: mRNA-seq for rapamycin treated PC3 cells, replicate #2.

text: rapamycin


text: Davide Ruggero, Urology, UCSF

text: live

text: Generic

text: Homo sapiens

text: ribosome protected RNA

text: PC3 human prostate cancer cells

text: Footprint for rapamycin treated PC3 cells, replicate #2.

text: rapamycin


text: Davide Ruggero, Urology, UCSF

text: live

text: Generic

text: Homo sapiens

text: polyA RNA

text: PC3 human prostate cancer cells

text: mRNA-seq for PP242 treated PC3 cells, replicate #2.


text: Davide Ruggero, Urology, UCSF

text: live

text: Generic

text: Homo sapiens

text: ribosome protected RNA

text: PC3 human prostate cancer cells

text: Footprint for PP242 treated PC3 cells, replicate #2.


text: University of Vienna

text: live

text: Generic

text: tetraploid cytotype used for the osilation of microsatellite containing sequences in scope of the project Structure and evolution of cytologically complex plant populations in apomictic Potentilla pusilla Host (Rosaceae) Project proposal submitted to the Austrian Science Fund by Christoph Dobeš, Department of Pharmacognosy, University of Vienna, Austria

characteristic: description

text: Potentilla pusilla

text: Potentilla pusilla Ptl4048, type line


characteristic: Coriell panel

characteristic: DNA id

characteristic: DNA source

text: NCBI

text: live

text: Generic

text: Gambian in Western Division - Mandinka

characteristic: Population Description

characteristic: SRA accession

text: AFR

characteristic: Super Population Code

text: African

characteristic: Super Population Description

text: Generic

characteristic: culture collection

text: Human 1000 genomes individual HG02461

characteristic: family id

text: Homo sapiens

text: GWD

characteristic: population

text: trio

text: male

characteristic: sex

text: Coriell HG02461


text: NCBI

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Gambian in Western Division - Mandinka

text: AFR

text: African

text: Generic

characteristic: biosamplemodel

text: Human 1000 genomes individual HG02462

text: Homo sapiens

characteristic: organism

text: GWD

text: trio

text: female

text: Coriell HG02462

characteristic: title


characteristic: External Id

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

text: Generic

text: Human 1000 genomes individual HG02463

characteristic: description

text: Homo sapiens

text: GWD

text: trio

text: male

text: Human 1000 genomes individual HG02463


characteristic: Coriell panel

characteristic: DNA id

characteristic: DNA source

text: NCBI

text: live

text: Generic

text: Gambian in Western Division - Mandinka

characteristic: Population Description

characteristic: SRA accession

text: AFR

characteristic: Super Population Code

text: African

characteristic: Super Population Description

text: Generic

text: Human 1000 genomes individual HG02464

text: Homo sapiens

text: GWD

text: trio

text: male

text: Coriell HG02464


text: NCBI

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

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text: AFR

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characteristic: family id

text: Homo sapiens

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characteristic: SRA accession

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characteristic: Super Population Code

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text: trio

text: female

text: Coriell HG02601

characteristic: title


characteristic: DNA source

characteristic: External Id

text: NCBI

characteristic: INSDC center name

text: live

text: Generic

characteristic: SRA accession

text: Generic

text: Human 1000 genomes individual HG02602

characteristic: description

text: Homo sapiens

text: PJL

text: trio

text: male

text: Human 1000 genomes individual HG02602


characteristic: Coriell panel

characteristic: DNA id

text: NCBI

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

text: Punjabi in Lahore, Pakistan

characteristic: Population Description

text: SAS

text: South Asian

text: Generic

characteristic: biosamplemodel

text: Human 1000 genomes individual HG02603

characteristic: family id

text: Homo sapiens

text: PJL

text: trio

text: male

text: Coriell HG02603


text: NCBI

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Punjabi in Lahore, Pakistan

text: SAS

characteristic: Super Population Code

text: South Asian

characteristic: Super Population Description

text: Generic

text: Human 1000 genomes individual HG02604

text: Homo sapiens

text: PJL

characteristic: population

text: trio

text: female

characteristic: sex

text: Coriell HG02604


characteristic: DNA source

characteristic: External Id

text: NCBI

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

text: Generic

text: Human 1000 genomes individual HG02605

text: Homo sapiens

characteristic: organism

text: PJL

text: trio

text: female

text: Human 1000 genomes individual HG02605

characteristic: title


characteristic: Coriell panel

characteristic: DNA id

text: NCBI

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

text: Punjabi in Lahore, Pakistan

characteristic: SRA accession

text: SAS

text: South Asian

text: Generic

characteristic: culture collection

text: Human 1000 genomes individual HG02654

characteristic: description

text: Homo sapiens

text: PJL

text: trio

text: male

text: Coriell HG02654


text: NCBI

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Punjabi in Lahore, Pakistan

characteristic: Population Description

text: SAS

characteristic: Super Population Code

text: South Asian

text: Generic

characteristic: biosamplemodel

text: Human 1000 genomes individual HG02655

characteristic: family id

text: Homo sapiens

text: PJL

text: trio

text: female

text: Coriell HG02655


characteristic: DNA source

characteristic: External Id

text: NCBI

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

text: Generic

text: Human 1000 genomes individual HG02656

text: Homo sapiens

text: PJL

characteristic: population

text: trio

text: male

characteristic: sex

text: Human 1000 genomes individual HG02656


characteristic: Coriell panel

characteristic: DNA id

text: NCBI

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

text: Punjabi in Lahore, Pakistan

text: SAS

text: South Asian

characteristic: Super Population Description

text: Generic

text: Human 1000 genomes individual HG02657

text: Homo sapiens

characteristic: organism

text: PJL

text: trio

text: male

text: Coriell HG02657

characteristic: title


text: NCBI

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Punjabi in Lahore, Pakistan

characteristic: Population Description

characteristic: SRA accession

text: SAS

text: South Asian

text: Generic

characteristic: culture collection

text: Human 1000 genomes individual HG02658

characteristic: description

text: Homo sapiens

text: PJL

text: trio

text: female

text: Coriell HG02658


characteristic: DNA source

characteristic: External Id

text: NCBI

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

text: Generic

characteristic: biosamplemodel

text: Human 1000 genomes individual HG02659

text: Homo sapiens

text: PJL

text: trio

text: female

text: Human 1000 genomes individual HG02659


characteristic: Coriell panel

characteristic: DNA id

text: NCBI

characteristic: INSDC first public

text: live

text: Generic

text: Punjabi in Lahore, Pakistan

text: SAS

characteristic: Super Population Code

text: South Asian

text: Generic

text: Human 1000 genomes individual HG02660

characteristic: family id

text: Homo sapiens

text: PJL

characteristic: population

text: trio

text: male

characteristic: sex

text: Coriell HG02660


text: NCBI

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission package

text: Punjabi in Lahore, Pakistan

text: SAS

text: South Asian

characteristic: Super Population Description

text: Generic

text: Human 1000 genomes individual HG02661

text: Homo sapiens

characteristic: organism

text: PJL

text: trio

text: female

text: Coriell HG02661

characteristic: title


characteristic: DNA source

characteristic: External Id

text: NCBI

characteristic: INSDC center name

text: live

text: Generic

characteristic: SRA accession

text: Generic

text: Human 1000 genomes individual HG02662

characteristic: description

text: Homo sapiens

text: PJL

text: trio

text: female

text: Human 1000 genomes individual HG02662


characteristic: Coriell panel

characteristic: DNA id

text: NCBI

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission model

text: Punjabi in Lahore, Pakistan

characteristic: Population Description

text: SAS

text: South Asian

text: Generic

characteristic: biosamplemodel

characteristic: culture collection

text: Human 1000 genomes individual HG02684

text: Homo sapiens

text: PJL

text: trio

text: male

text: Coriell HG02684


text: NCBI

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Punjabi in Lahore, Pakistan

text: SAS

characteristic: Super Population Code

text: South Asian

text: Generic

text: Human 1000 genomes individual HG02685

characteristic: family id

text: Homo sapiens

text: PJL

characteristic: population

text: trio

text: female

characteristic: sex

text: Coriell HG02685


characteristic: DNA source

characteristic: External Id

text: NCBI

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission package

text: Generic

text: Human 1000 genomes individual HG02686

text: Homo sapiens

characteristic: organism

text: PJL

text: trio

text: male

text: Human 1000 genomes individual HG02686

characteristic: title


characteristic: Coriell panel

characteristic: DNA id

text: NCBI

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission model

text: Punjabi in Lahore, Pakistan

characteristic: SRA accession

text: SAS

text: South Asian

characteristic: Super Population Description

text: Generic

text: Human 1000 genomes individual HG02687

characteristic: description

text: Homo sapiens

text: PJL

text: trio

text: male

text: Coriell HG02687


text: NCBI

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Punjabi in Lahore, Pakistan

characteristic: Population Description

text: SAS

characteristic: Super Population Code

text: South Asian

text: Generic

characteristic: biosamplemodel

characteristic: culture collection

text: Human 1000 genomes individual HG02688

text: Homo sapiens

text: PJL

text: trio

text: female

text: Coriell HG02688


characteristic: DNA source

characteristic: External Id

text: NCBI

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission package

text: Generic

text: Human 1000 genomes individual HG02689

text: Homo sapiens

text: PJL

characteristic: population

text: trio

text: male

characteristic: sex

text: Human 1000 genomes individual HG02689


characteristic: Coriell panel

characteristic: DNA id

text: NCBI

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission model

text: Punjabi in Lahore, Pakistan

text: SAS

text: South Asian

text: Generic

text: Human 1000 genomes individual HG02696

characteristic: family id

text: Homo sapiens

characteristic: organism

text: PJL

text: trio

text: male

text: Coriell HG02696

characteristic: title


text: NCBI

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Punjabi in Lahore, Pakistan

characteristic: Population Description

characteristic: SRA accession

text: SAS

text: South Asian

characteristic: Super Population Description

text: Generic

text: Human 1000 genomes individual HG02697

characteristic: description

text: Homo sapiens

text: PJL

text: trio

text: female

text: Coriell HG02697


characteristic: DNA source

characteristic: External Id

text: NCBI

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission package

text: Generic

characteristic: biosamplemodel

text: Human 1000 genomes individual HG02698

text: Homo sapiens

text: PJL

text: trio

text: male

text: Human 1000 genomes individual HG02698


characteristic: Coriell panel

characteristic: DNA id

text: NCBI

characteristic: INSDC first public

text: live

text: Generic

text: Punjabi in Lahore, Pakistan

text: SAS

characteristic: Super Population Code

text: South Asian

text: Generic

characteristic: culture collection

text: Human 1000 genomes individual HG02733

text: Homo sapiens

text: PJL

characteristic: population

text: trio

text: male

characteristic: sex

text: Coriell HG02733


text: NCBI

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Punjabi in Lahore, Pakistan

text: SAS

text: South Asian

text: Generic

text: Human 1000 genomes individual HG02734

characteristic: family id

text: Homo sapiens

characteristic: organism

text: PJL

text: trio

text: female

text: Coriell HG02734

characteristic: title


characteristic: DNA source

characteristic: External Id

text: NCBI

characteristic: INSDC center name

text: live

text: Generic

characteristic: SRA accession

text: Generic

text: Human 1000 genomes individual HG02735

characteristic: description

text: Homo sapiens

text: PJL

text: trio

text: male

text: Human 1000 genomes individual HG02735


text: Buell Lab, Dept. of Plant Biology, Michigan State University

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

text: Zea mays subsp. mays

text: Zea Mays, B73 24H_Germinating Seed_R1


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 24H_Germinating Seed_R2


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 24H_Germinating Seed_R3


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 6DAS_GH_Primary Root_R1


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 6DAS_GH_Primary Root_R2


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 6DAS_GH_Primary Root_R3


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 V3_Stem and SAM_R1


text: College of Pastoral Agricultural Science and Technology, Lanzhou University

text: live

text: Generic

text: Lanjian 3

characteristic: cultivar

text: Floral stage 12 of approximately 45 days plants

characteristic: development stage

text: Vicia sativa

text: Sepals

text: Sepals

characteristic: tissue


characteristic: INSDC last update

text: live

text: Generic

text: Lanjian 3

text: Vicia sativa

text: Dorsal petals

text: Dorsal petals


characteristic: INSDC secondary accession

text: live

text: Generic

text: Lanjian 3

text: Vicia sativa

text: Lateral petals

text: Lateral petals


text: live

characteristic: INSDC status

text: Generic

text: Lanjian 3

text: Vicia sativa

text: Ventral petals

text: Ventral petals


text: live

text: Generic

characteristic: NCBI submission model

text: Lanjian 3

text: Vicia sativa

text: Stamens

text: Stamens


text: live

text: Generic

text: Lanjian 3

text: Vicia sativa

text: Carpels

text: Carpels


text: live

text: Generic

text: Lanjian 3

text: 2-week-old seedlings

text: Vicia sativa

text: Leaves

text: Leaves


text: live

text: Generic

text: Lanjian 3

text: 2-week-old seedlings

text: Vicia sativa

text: Roots

text: Roots


Cow rumenomics of the fluid fraction

text: Università degli studi di Udine

text: live

text: Generic

text: Bos taurus

text: Influence of yeasts supplementation on microbiome composition of liquid fraction rumen content of lactating cows


text: UCR

text: live

text: Generic

characteristic: genetic background

text: wt

characteristic: genotype

text: Arabidopsis thaliana

text: Col rep1

text: inflorescences

text: Endogenous small RNAs from wild-type Col, replicate 1


text: UCR

text: live

text: Generic

text: Arabidopsis thaliana

characteristic: organism

text: heso1-1 rep1

text: inflorescences

text: Endogenous small RNAs from heso1-1, replicate 1

characteristic: title


characteristic: External Id

text: UCR

text: live

text: Generic

text: Arabidopsis thaliana

text: hen1-8 rep1

text: inflorescences

text: Endogenous small RNAs from hen1-8, replicate 1


text: UCR

characteristic: INSDC center name

text: live

text: Generic

text: hen1-8 heso1-1

text: Arabidopsis thaliana

text: hen1-8 heso1-1 rep1

text: inflorescences

text: Endogenous small RNAs from hen1-8 heso1-1, replicate 1


text: UCR

text: live

text: Generic

characteristic: SRA accession

text: wt

text: Arabidopsis thaliana

text: Col rep2

text: inflorescences

text: Endogenous small RNAs from wild-type Col, replicate 2


text: UCR

text: live

text: Generic

text: Arabidopsis thaliana

text: heso1-1 rep2

text: inflorescences

text: Endogenous small RNAs from heso1-1, replicate 2


text: UCR

text: live

text: Generic

text: Arabidopsis thaliana

text: hen1-8 rep2

text: inflorescences

text: Endogenous small RNAs from hen1-8, replicate 2


text: UCR

text: live

text: Generic

text: hen1-8 heso1-1

text: Arabidopsis thaliana

text: hen1-8 heso1-1 rep2

text: inflorescences

text: Endogenous small RNAs from hen1-8 heso1-1, replicate 2


name: 1132331588033 Leptospira interrogans serovar Pyrogenes str. 2006006960 LS454019-PE-ILI49-1 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Leptospira interrogans serovar Pyrogenes str. 2006006960

characteristic: description

characteristic: strain

text: Generic sample from Leptospira interrogans serovar Pyrogenes str. 2006006960


name: 1132331588035 Leptospira noguchii serovar undetermined str. 1993005606 LS454021-PE-ILI50-1 Sample

text: J. Craig Venter Institute

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

text: Total DNA isolated from Leptospira noguchii serovar undetermined str. 1993005606

text: Leptospira noguchii str. 1993005606

text: Generic sample from Leptospira noguchii str. 1993005606


name: 1132331588037 Leptospira interrogans serovar undetermined str. 2002000621 LS454025-PE-ILI3-1 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Leptospira interrogans serovar undetermined str. 2002000621

text: Leptospira interrogans str. 2002000621

text: Generic sample from Leptospira interrogans str. 2002000621


name: 1132331588039 Leptospira interrogans serovar undetermined str. 2002000623 LS454026-PE-ILI51-1 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Leptospira interrogans serovar undetermined str. 2002000623

text: Leptospira interrogans str. 2002000623

text: Generic sample from Leptospira interrogans str. 2002000623


name: 1132331588041 Leptospira noguchii serovar undetermined str. 2007001578 LS454035-PE-ILI4-1 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Leptospira noguchii serovar undetermined str. 2007001578

text: Leptospira noguchii str. 2007001578

text: Generic sample from Leptospira noguchii str. 2007001578


name: 1132331588043 Leptospira weilii serovar undetermined str. 2006001853 LS454036-PE-ILI5-1 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Leptospira weilii serovar undetermined str. 2006001853

text: Leptospira weilii str. 2006001853

text: Generic sample from Leptospira weilii str. 2006001853


name: 1132331588045 Leptospira santarosai serovar undetermined str. 2000027870 LS454039-PE-ILI6-1 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Leptospira santarosai serovar undetermined str. 2000027870

text: Leptospira santarosai str. 2000027870

text: Generic sample from Leptospira santarosai str. 2000027870


name: 1132331588047 Leptospira santarosai serovar undetermined str. 2000030832 LS454040-PE-ILI7-1 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Leptospira santarosai serovar undetermined str. 2000030832

text: Leptospira santarosai str. 2000030832

text: Generic sample from Leptospira santarosai str. 2000030832


name: 1132331588049 Leptospira noguchii serovar undetermined str. 2006001870 LS454041-PE-ILI8-1 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Leptospira noguchii serovar undetermined str. 2006001870

text: Leptospira noguchii str. 2006001870

text: Generic sample from Leptospira noguchii str. 2006001870


name: 1132331588051 Leptospira kirschneri serovar Grippotyphosa str. RM52 LS454044-PE-ILI9-1 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Leptospira kirschneri serovar Grippotyphosa str. RM52

text: Generic sample from Leptospira kirschneri serovar Grippotyphosa str. RM52


name: 1132331588053 Leptospira kirschneri serovar Bim str. 1051 LS454046-PE-ILI52-1 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Leptospira kirschneri serovar Bim str. 1051

text: Generic sample from Leptospira kirschneri serovar Bim str. 1051


name: 1132331588055 Leptospira inadai serovar Lyme str. 10T LS454047-PE-ILI53-1 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Leptospira inadai serovar Lyme str. 10T

text: Leptospira inadai serovar Lyme str. 10

text: Generic sample from Leptospira inadai serovar Lyme str. 10


name: 1132331588057 Leptospira kirschneri serovar Cynopteri str. 3522 CT LS454049-PE-ILI54-1 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Leptospira kirschneri serovar Cynopteri str. 3522 CT

text: 3522 CT

text: Generic sample from Leptospira kirschneri serovar Cynopteri str. 3522 CT


name: 1132331588059 Leptospira broomii serovar undetermined str. 5399T LS454050-PE-ILI55-1 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Leptospira broomii serovar undetermined str. 5399T

text: Leptospira broomii serovar Hurstbridge str. 5399

text: Generic sample from Leptospira broomii str. 5399


name: 1132331588061 Leptospira alexanderi serovar Manhoa 3 str. L 60T LS454062-PE-ILI56-1 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Leptospira alexanderi serovar Manhoa 3 str. L 60T

text: L 60

text: Generic sample from Leptospira alexanderi serovar Manhao 3 str. L 60


name: 1132331588063 Leptospira santarosai serovar Arenal str. MAVJ 401 LS454063-PE-ILI57-1 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Leptospira santarosai serovar Arenal str. MAVJ 401

text: MAVJ 401

text: Generic sample from Leptospira santarosai serovar Arenal str. MAVJ 401


name: 1132331588065 Leptospira kirschneri serovar Grippotyphosa str. Moskva LS454064-PE-ILI58-1 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Leptospira kirschneri serovar Grippotyphosa str. Moskva

text: Moskva

text: Generic sample from Leptospira kirschneri serovar Grippotyphosa str. Moskva


name: 1132331588067 Leptospira kirschneri serovar Sokoine str. RM1 LS454065-PE-ILI59-1 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Leptospira kirschneri serovar Sokoine str. RM1

text: Generic sample from Leptospira kirschneri serovar Sokoine str. RM1


name: 1132331588069 Leptospira interrogans serovar undetermined str. C10069 LS454077-PE-ILI11-1 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Leptospira interrogans serovar undetermined str. C10069

text: Leptospira interrogans str. C10069

text: Generic sample from Leptospira interrogans str. C10069


name: 1132331588071 Leptospira interrogans serovar undetermined str. FPW2026 LS454080-PE-ILI12-1 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Leptospira interrogans serovar undetermined str. FPW2026

text: Leptospira interrogans str. FPW2026

text: Generic sample from Leptospira interrogans str. FPW2026


name: 1132331588073 Leptospira interrogans serovar Djasiman str. LT1649 LS454145-PE-ILI37-1 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Leptospira interrogans serovar Djasiman str. LT1649

text: Generic sample from Leptospira interrogans serovar Djasiman str. LT1649


text: Broad Institute

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: Female

characteristic: host sex

text: Pelomonas sp. ORNL_6EZ5-Gt_7_Pl1-73

characteristic: sample name

text: Generic sample from Pelomonas sp. ORNL_6EZ5-Gt_7_Pl1-73


text: Wilhelmina Children's Hospital, University Medical Center Utrecht

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: DLD1 colon carcinoma cell line

characteristic: cell line

text: ER antibody, Santa Cruz (MC-20)

characteristic: chip antibody

text: Homo sapiens

text: DLD1 cell line


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: DL23 clone containing pcDNA3-HA-FOXO33-ER

text: ER antibody, Santa Cruz (MC-20)

text: Homo sapiens

text: DL23 cell line with pcDNA3-HA-FOXO33-ER


text: live

text: Generic

text: DLD1 colon carcinoma cell line

text: anti RBP1 (PB-7C2) antibody (Euromedex)

text: Homo sapiens

characteristic: organism

text: DLD1 cell line

text: 0 hours

characteristic: time

characteristic: title


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

characteristic: SRA accession

text: DLD1 colon carcinoma cell line

text: anti RBP1 (PB-7C2) antibody (Euromedex)

text: Homo sapiens

text: DLD1 cell line

text: 4 hours


characteristic: INSDC first public

text: live

text: Generic

text: DLD1 colon carcinoma cell line

text: anti RBP1 (PB-7C2) antibody (Euromedex)

text: Homo sapiens

text: DLD1 cell line

text: 24 hours


text: live

text: Generic

characteristic: NCBI submission package

text: anti RBP1 (PB-7C2) antibody (Euromedex)

text: Homo sapiens

text: DL23 cell line with pcDNA3-HA-FOXO33-ER

text: 0 hours


text: live

text: Generic

text: anti RBP1 (PB-7C2) antibody (Euromedex)

text: Homo sapiens

text: DL23 cell line with pcDNA3-HA-FOXO33-ER

text: 4 hours


text: live

text: Generic

text: anti RBP1 (PB-7C2) antibody (Euromedex)

text: Homo sapiens

text: DL23 cell line with pcDNA3-HA-FOXO33-ER

text: 24 hours


text: University of Utah

text: live

text: Generic

text: Genomic DNA from the EtoxR strain of Tetranychus urticae (the two-spotted spider mite) was prepared according to standard methods. The DNA was used for construction of an Illumina sequencing library. Single end reads were produced on a single lane of an Illumina Genome Analyzer II instrument. Read lengths are 80 bp with no barcoding.

characteristic: description

text: Tetranychus urticae

text: EtoxR strain re-sequencing data


text: Universiti Malaysia Sarawak

text: live

text: Generic

text: young

characteristic: dev-stage

text: Metroxylon sagu

text: leaf

characteristic: tissue-type

text: Sago palm young leaf

text: phagemid


text: University of Utah

characteristic: INSDC last update

text: live

text: Generic

text: Genomic DNA from the London strain of Tetranychus urticae (the two-spotted spider mite) was prepared according to standard methods. The DNA was used for construction of an Illumina sequencing library. Single end reads were produced on a single lane of an Illumina Genome Analyzer II instrument. Read lengths are 82 bp with no barcoding.

text: Tetranychus urticae

text: London strain re-sequencing data


text: University of Utah

characteristic: INSDC secondary accession

text: live

text: Generic

text: Genomic DNA from the non-(etoxazole)selected strain of Tetranychus urticae (the two-spotted spider mite) was prepared according to standard methods. The non-selected strain originated from a cross between the London and EtoxR strains of the spider mite. The DNA was used for construction of an Illumina sequencing library. Single end reads were produced on a single lane of an Illumina Genome Analyzer II instrument. Read lengths are 82 bp with no barcoding.

text: Tetranychus urticae

text: Non-selected strain of Tetranychus urticae, re-sequencing data


text: University of Utah

text: live

text: Generic

text: Genomic DNA from an etoxazole selected strain of Tetranychus urticae (the two-spotted spider mite) was prepared according to standard methods. The selected strain originated from a cross between the London and EtoxR strains of the spider mite. The DNA was used for construction of an Illumina sequencing library. Single end reads were produced on a single lane of an Illumina Genome Analyzer II instrument. Read lengths are 82 bp with no barcoding.

text: Tetranychus urticae

text: Selected strain of Tetranychus urticae, re-sequencing data


text: Buell Lab, Dept. of Plant Biology, Michigan State University

text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 V3_Stem and SAM_R2


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 V3_Stem and SAM_R3


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 V5_Tip of stage-2 Leaf_R1


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 V5_Tip of stage-2 Leaf_R2


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 V5_Tip of stage-2 Leaf_R3


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 V9_Eighth Leaf_R1


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 V9_Eighth Leaf_R2


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 V9_Eighth Leaf_R3


text: Broad Institute

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: Saccharomyces cerevisiae W303

characteristic: sample name

characteristic: strain

text: Generic sample from Saccharomyces cerevisiae W303


text: Chinese National Human Genome Center at Shanghai

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Holoxea

text: Unexpected diverse algae symbionts revealed by deep sequencing of sponge microbiome


text: live

text: Generic

text: Lamellomorpha

characteristic: organism


common carp

text: Hunan Normal University

text: live

text: Generic

text: Cyprinus carpio

text: Characterization and comparative profiling of RNA transcriptomes in red crucian carp , common carp and tetraploid carp.

characteristic: title


Crassostrea virginica

characteristic: External Id

text: Institue of oceanology, Chinese academic of sciences

text: live

text: Generic

text: The sample was from cultural family and approximately 60 mm in shell height. According the polymorphism, only one individual per was selected for RNA extraction. Before sampled, the oyster was acclimatized in seawater tanks at a temperature of 20 *C and a salinity of 30.

text: Crassostrea virginica

text: The eastern oyster Crassostrea virginica


Frontal lobe miR-seq donor A

text: Tel Aviv University

characteristic: INSDC center name

text: live

text: Generic

text: Normal frontal white matter samples, obtained from pediatric patient undergoing focal brain resection for head injury sequelae. The patient was a boy of 3 year old. Brain sample was collected during neurosurgery of the patient at the Policlinico Gemelli in Rome. The study was approved by the local ethical committee. miRVana miRNA Isolation Kit (Ambion, USA) was used following the manufacturing instruction in order to isolate miRNAs. The miRNAs were sequenced using Illumina HiSeq2000 machine.

text: Homo sapiens

text: Frontal lobe miR-seq: donor A


Frontal lobe miRseq donor B

text: Tel Aviv University

text: live

text: Generic

characteristic: SRA accession

text: Normal frontal white matter samples, obtained from pediatric patient undergoing focal brain resection for head injury sequelae. The patient was a girl of 3 months old. Brain sample was collected during neurosurgery of the patient at the Policlinico Gemelli in Rome. The study was approved by the local ethical committee. miRVana miRNA Isolation Kit (Ambion, USA) was used following the manufacturing instruction in order to isolate miRNAs. The miRNAs were sequenced using Illumina HiSeq2000 machine.

text: Homo sapiens

text: Frontal lobe miRseq: donor B


text: GBB, NIDDK

characteristic: INSDC first public

text: live

text: Generic

text: Anti-DMC1 (C-20)

characteristic: chip antibody

text: Santa Cruz

characteristic: chip antibody vendor

text: wild type

characteristic: genotype/variation

text: Mus musculus

text: Single Stranded DNA Sequencing (SSDS)

characteristic: sequencing technique

text: Anti-DMC1 B6_testis_SSDS

text: testis

characteristic: tissue

text: Anti-DMC1 B6 Sample 1


text: GBB, NIDDK

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

text: Anti-DMC1 (C-20)

text: Santa Cruz

text: wild type

text: Mus musculus

text: Single Stranded DNA Sequencing (SSDS)

text: Anti-DMC1 B6_testis_SSDS

text: testis

text: Anti-DMC1 B6 Sample 2


text: NIDDK

text: live

text: Generic

text: Anti-DMC1 (C-20)

text: Santa Cruz

text: wild type

text: Mus musculus

text: Single Stranded DNA Sequencing (SSDS)

text: Anti-DMC1 13R_testis_SSDS

characteristic: strain

text: testis

text: Anti-DMC1 13R Sample 1


text: NIDDK

text: live

characteristic: INSDC status

text: Generic

text: Anti-DMC1 (C-20)

text: Santa Cruz

text: wild type

text: Mus musculus

text: Single Stranded DNA Sequencing (SSDS)

text: Anti-DMC1 13R_testis_SSDS

text: testis

text: Anti-DMC1 13R Sample 2


text: NIDDK

text: live

text: Generic

characteristic: NCBI submission model

text: Anti-DMC1 (C-20)

text: Santa Cruz

text: wild type

text: Mus musculus

text: Single Stranded DNA Sequencing (SSDS)

text: Anti-DMC1 9R_testis_SSDS

text: testis

text: Anti-DMC1 9R Sample 1


text: NIDDK

text: live

text: Generic

text: Anti-DMC1 (C-20)

text: Santa Cruz

text: wild type

text: Mus musculus

characteristic: organism

text: Single Stranded DNA Sequencing (SSDS)

text: Anti-DMC1 9R_testis_SSDS

text: testis

text: Anti-DMC1 9R Sample 2


text: NIDDK

text: live

text: Generic

text: Anti-DMC1 (C-20)

text: Santa Cruz

text: wild type

text: Mus musculus

text: Single Stranded DNA Sequencing (SSDS)

text: Anti-DMC1 F1_testis_SSDS

text: B10.F-H2pb1/(13R)J X B11.S-H2t4/(9R)/J

text: testis

text: Anti-DMC1 F1 Sample 1

characteristic: title


characteristic: External Id

text: NIDDK

text: live

text: Generic

text: Anti-DMC1 (C-20)

text: Santa Cruz

text: wild type

text: Mus musculus

text: Single Stranded DNA Sequencing (SSDS)

text: Anti-DMC1 F1_testis_SSDS

text: B10.F-H2pb1/(13R)J X B11.S-H2t4/(9R)/J

text: testis

text: Anti-DMC1 F1 Sample 2


text: NIDDK

characteristic: INSDC center name

text: live

text: Generic

text: wild type

text: Mus musculus

text: Single Stranded DNA Sequencing (SSDS)

text: Input DNA with Kinetic Enrichment_testis_SSDS

text: B10.F-H2pb1/(13R)J X B11.S-H2t4/(9R)/J

text: testis

text: Input DNA with Kinetic Enrichment


text: GBB, NIDDK

text: live

text: Generic

characteristic: SRA accession

text: Anti-DMC1 (C-20)

text: Santa Cruz

text: wild type

text: Mus musculus

text: Single Stranded DNA Sequencing (SSDS)

text: Anti-DMC1 Prdm9-/-_testis_SSDS

text: B6; 129P2-Prdm9tm1Ymat/J

text: testis

text: Anti-DMC1 Prdm9-/-


text: NIDDK

characteristic: INSDC first public

text: live

text: Generic

text: Anti-H3K4me3 Millipore (#07-473)

text: Millipore

text: wild type

text: Mus musculus

text: ChIP-Seq

text: Anti-H3K4me3 B6_testis_ChIP-Seq

text: testis

text: Anti-H3K4me3 B6 Sample 1


text: NIDDK

text: live

text: Generic

text: Anti-H3K4me3 Millipore (#07-473)

characteristic: chip antibody

text: Millipore

text: wild type

text: Mus musculus

text: ChIP-Seq

text: Anti-H3K4me3 B6_testis_ChIP-Seq

text: testis

text: Anti-H3K4me3 B6 Sample 2


text: NIDDK

text: live

text: Generic

text: Anti-H3K4me3 Millipore (#07-473)

text: Millipore

characteristic: chip antibody vendor

text: Mus musculus

text: ChIP-Seq

text: Anti-H3K4me3 13R_testis_ChIP-Seq

text: testis

text: Anti-H3K4me3 13R


text: NIDDK

text: live

text: Generic

text: Anti-H3K4me3 Millipore (#07-473)

text: Millipore

characteristic: genotype/variation

text: Mus musculus

text: ChIP-Seq

text: Anti-H3K4me3 9R_testis_ChIP-Seq

text: testis

text: Anti-H3K4me3 9R


text: NIDDK

text: live

text: Generic

text: Anti-H3K4me3 Millipore (#07-473)

text: Millipore

text: Mus musculus

text: ChIP-Seq

characteristic: sequencing technique

text: Anti-H3K4me3 Prdm9-/-_testis_ChIP-Seq

text: B6; 129P2-Prdm9tm1Ymat/J

text: testis

text: Anti-H3K4me3 Prdm9-/- Testis


text: NIDDK

text: live

text: Generic

text: Anti-H3K4me3 Millipore (#07-473)

text: Millipore

text: Mus musculus

text: ChIP-Seq

text: Anti-H3K4me3 Prdm9-/-_liver_ChIP-Seq

text: B6; 129P2-Prdm9tm1Ymat/J

text: liver

characteristic: tissue

text: Anti-H3K4me3 Prdm9-/- Liver


text: NIDDK

characteristic: INSDC last update

text: live

text: Generic

text: Anti-H3K4me3 Millipore (#07-473)

text: Millipore

text: Mus musculus

text: ChIP-Seq

text: Anti-H3K4me3 Spo11-/-_testis_ChIP-Seq

text: testis

text: Anti-H3K4me3 Spo11-/-


text: Broad Institute

characteristic: INSDC secondary accession

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

characteristic: isolation source

text: Homo sapiens

characteristic: sample name

text: Generic sample from Homo sapiens


text: Boyce Thompson Institute

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Solanum lycopersicum

text: tomato Heinz genome sequencing


P. falciparum KAD707 A

characteristic: External Id

text: University of California, San Diego

text: live

text: Generic

text: Plasmodium falciparum

characteristic: organism

text: P. falciparum KAD707 A

characteristic: title


P. falciparum KAD707 B

text: University of California, San Diego

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: SRA accession

text: Plasmodium falciparum

text: P. falciparum KAD707 B


P. falciparum KAD707 C

text: University of California, San Diego

text: live

text: Generic

text: Plasmodium falciparum

text: P. falciparum KAD707 C


P. falciparum Dd2wt

text: University of California, San Diego

text: live

text: Generic

text: Parental strain from which resistant lines were derived.

characteristic: description

text: Plasmodium falciparum

text: P. falciparum Dd2wt


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 V9_Eleventh Leaf_R1


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 V9_Eleventh Leaf_R2


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 V9_Eleventh Leaf_R3


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 V9_Thirteenth Leaf_R1


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 V9_Thirteenth Leaf_R2


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 V9_Thirteenth Leaf_R3


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 V9_Immature Leaves_R1


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 V9_Immature Leaves_R2


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 V9_Immature Leaves_R3


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 VT_Thirteenth Leaf_R1


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 VT_Thirteenth Leaf_R2


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 VT_Thirteenth Leaf_R3


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 R2_Thirteenth Leaf_R1


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 R2_Thirteenth Leaf_R2


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 R2_Thirteenth Leaf_R3


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 10DAP_Whole seed_R1


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 10DAP_Whole seed_R2


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 10DAP_Whole seed_R3


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 12DAP_Whole seed_R1


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 12DAP_Whole seed_R2


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 12DAP_Whole seed_R3


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 12DAP_Endopsperm_R1


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 12DAP_Endopsperm_R2


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 12DAP_Endopsperm_R3


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 14DAP_Whole seed_R1


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 14DAP_Whole seed_R2


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 14DAP_Whole seed_R3


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 14DAP_Endopsperm_R1


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 14DAP_Endopsperm_R2


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 14DAP_Endopsperm_R3


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 16DAP_Whole seed_R1


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 16DAP_Whole seed_R2


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 16DAP_Whole seed_R3


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 16DAP_Endosperm_R1


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 16DAP_Endosperm_R2


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 16DAP_Endosperm_R3


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 16DAP_Embryo_R1


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 16DAP_Embryo_R2


text: live

text: Generic

text: Zea mays subsp. mays

text: Zea Mays, B73 16DAP_Embryo_R3


text: DOE Joint Genome Institute

text: live

text: Generic

text: Svalbard Archipelago station 2 sample NOR 13_50m

text: marine sediment metagenome

characteristic: sample number

text: Generic sample from marine sediment metagenome


text: Marine Biological Laboratory

text: live

text: Generic

characteristic: ammonium

text: Generic

characteristic: chlorophyll

characteristic: collection date

characteristic: conductivity

text: USA

characteristic: country

characteristic: depth

characteristic: depth end

characteristic: depth start

text: top 50 m

text: ENVO:freshwater;ENVO:aquatic_habitat;ENVO:water

characteristic: environment

text: freshwater

text: aquatic habitat

text: water

text: Toolik Main Epiliminion (Summer)

characteristic: lat

characteristic: lat lon

characteristic: lon

characteristic: methane

characteristic: nitrate

text: freshwater metagenome

characteristic: ph

text: oxic

characteristic: salinity

characteristic: silicate

characteristic: temp


characteristic: External Id

text: Marine Biological Laboratory

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Generic

characteristic: biosamplemodel

characteristic: chlorophyll

text: USA

text: top 50 m

text: freshwater

text: aquatic habitat

text: water

text: I8 Inlet Stream

text: freshwater metagenome

characteristic: organism

characteristic: phosphate

text: oxic

characteristic: title


text: Marine Biological Laboratory

text: live

text: Generic

text: Generic

characteristic: collection date

characteristic: conductivity

text: USA

characteristic: country

characteristic: depth

characteristic: depth end

characteristic: depth start

text: top 50 m

characteristic: environment

text: freshwater

text: aquatic habitat

text: water

text: Toolik Inlet Stream

characteristic: lat

characteristic: lat lon

characteristic: lon

characteristic: methane

characteristic: nitrate

text: freshwater metagenome

characteristic: ph

characteristic: phaeopigments

text: oxic

characteristic: salinity


characteristic: External Id

text: Marine Biological Laboratory

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: ammonium

text: Generic

characteristic: biosamplemodel

characteristic: chlorophyll

text: USA

text: top 50 m

text: freshwater

text: aquatic habitat

text: water

text: Toolik Main Hypolimnion (Spring

text: freshwater metagenome

characteristic: organism

characteristic: phosphate

text: oxic

characteristic: silicate

characteristic: temp


text: Marine Biological Laboratory

text: live

text: Generic

text: Generic

characteristic: collection date

characteristic: conductivity

text: USA

characteristic: country

text: n/a below ground level

characteristic: depth

text: n/a below ground level

characteristic: depth end

text: n/a below ground level

characteristic: depth start

text: top 50 m

characteristic: environment

text: freshwater

text: aquatic habitat

text: water

text: Toolik Inlet Soil Water

characteristic: lat

characteristic: lat lon

characteristic: lon

characteristic: methane

characteristic: nitrate

text: freshwater metagenome

characteristic: ph

text: oxic

characteristic: salinity

characteristic: title


characteristic: External Id

text: Marine Biological Laboratory

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: ammonium

text: Generic

characteristic: biosamplemodel

characteristic: chlorophyll

text: USA

text: top 50 m

text: freshwater

text: aquatic habitat

text: water

text: Toolik Main Hypolimnion (Summer)

text: freshwater metagenome

characteristic: organism

characteristic: phosphate

text: oxic

characteristic: silicate