text: MIT

text: live

text: Generic

text: Yarrowia lipolytica

text: in vivo cells

text: CLIB 89

text: Yarrowia lipolytica genome-wide nucleosome data


status: PUBLIC

characteristic: External Id

text: Systems Biology Research Group, Bioengineering, UCSD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: electrode

tag: attribute

characteristic: condition

text: wild type

characteristic: genotype

text: Geobacter sulfurreducens PCA

characteristic: organism

text: G. sulfurreducens PCA, grown on electrode, one week

text: PCA

characteristic: strain

characteristic: title

text: type strain of Geobacter sulfurreducens

characteristic: type material


text: live

text: Generic

text: fresh water acetate-fumarate (FWAF) medium

text: wild type

text: Geobacter sulfurreducens PCA

text: G. sulfurreducens PCA, grown in FWAF medium, mid-log phase

text: PCA

text: type strain of Geobacter sulfurreducens


text: live

text: Generic

text: fresh water acetate-fumarate (FWAF) medium with N2

text: wild type

text: Geobacter sulfurreducens PCA

text: G. sulfurreducens PCA, grown in FWAF medium with N2 as nitrogen source, mid-log phase

text: PCA

text: type strain of Geobacter sulfurreducens


text: Computational Systems Biology, Genome Institute of Singapore

text: live

text: Generic

text: custom made PRDM14

characteristic: antibody

text: pluripotent and self-renewing cells

characteristic: cell type

text: Homo sapiens

text: Embyonic stem cells


characteristic: External Id

text: live

text: Generic

text: none, control input DNA

text: pluripotent and self-renewing cells

text: Homo sapiens

text: Embyonic stem cells


text: BGI-Shenzhen, Shenzhen 518083, China

characteristic: INSDC center name

text: live

text: Generic

characteristic: colony

text: egg

characteristic: developmental stage

text: Camponotus floridanus

text: egg

text: cflo_egg [mRNA]


text: BGI-Shenzhen, Shenzhen 518083, China

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: larva

text: Camponotus floridanus

text: larva

text: cflo_larva [mRNA]


text: BGI-Shenzhen, Shenzhen 518083, China

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: male

characteristic: gender

text: Camponotus floridanus

text: male

text: cflo_male [mRNA]


text: BGI-Shenzhen, Shenzhen 518083, China

text: live

text: Generic

characteristic: SRA accession

text: minor

text: Camponotus floridanus

characteristic: organism

text: minor

text: cflo_minor [mRNA]


text: BGI-Shenzhen, Shenzhen 518083, China

text: live

text: Generic

text: major

text: Camponotus floridanus

text: major

text: cflo_major [mRNA]

characteristic: title


text: BGI-Shenzhen, Shenzhen 518083, China

text: live

text: Generic

text: egg

text: Harpegnathos saltator

text: egg

text: hsal_egg [mRNA]


text: BGI-Shenzhen, Shenzhen 518083, China

text: live

text: Generic

text: larva

text: Harpegnathos saltator

text: larva

text: hsal_larva [mRNA]


text: BGI-Shenzhen, Shenzhen 518083, China

text: live

text: Generic

text: male

text: Harpegnathos saltator

text: male

text: hsal_male [mRNA]


text: BGI-Shenzhen, Shenzhen 518083, China

text: live

text: Generic

text: worker

text: Harpegnathos saltator

text: worker

text: hsal_worker [mRNA]


text: BGI-Shenzhen, Shenzhen 518083, China

text: live

text: Generic

text: gammergate

text: Harpegnathos saltator

text: gammergate

text: hsal_gammergate [mRNA]


text: BGI-Shenzhen, Shenzhen 518083, China

text: live

text: Generic

text: egg

text: Camponotus floridanus

text: egg

text: cflo_egg [small RNA]


text: BGI-Shenzhen, Shenzhen 518083, China

text: live

text: Generic

text: larva

text: Camponotus floridanus

text: larva

text: cflo_larva [small RNA]


text: BGI-Shenzhen, Shenzhen 518083, China

text: live

text: Generic

text: male

text: Camponotus floridanus

text: male

text: cflo_male [small RNA]


text: BGI-Shenzhen, Shenzhen 518083, China

text: live

text: Generic

text: minor

text: Camponotus floridanus

text: minor

text: cflo_minor [small RNA]


text: BGI-Shenzhen, Shenzhen 518083, China

text: live

text: Generic

text: major

text: Camponotus floridanus

text: major

text: cflo_major [small RNA]


text: BGI-Shenzhen, Shenzhen 518083, China

text: live

text: Generic

text: egg

text: Harpegnathos saltator

text: egg

text: hsal_egg [small RNA]


text: BGI-Shenzhen, Shenzhen 518083, China

text: live

text: Generic

text: larva

text: Harpegnathos saltator

text: larva

text: hsal_larva [small RNA]


text: BGI-Shenzhen, Shenzhen 518083, China

text: live

text: Generic

text: male

text: Harpegnathos saltator

text: male

text: hsal_male [small RNA]


text: BGI-Shenzhen, Shenzhen 518083, China

text: live

text: Generic

text: worker

text: Harpegnathos saltator

text: worker

text: hsal_worker [small RNA]


text: BGI-Shenzhen, Shenzhen 518083, China

text: live

text: Generic

text: gammergate

text: Harpegnathos saltator

text: gammergate

text: hsal_gammergate [small RNA]


text: St Vincent's Institute of Medical Research

text: live

text: Generic

text: 6-7 weeks

characteristic: age

text: DN3 thymocytes

text: C57BL/6 backcrossed

characteristic: genetic background

text: Mus musculus

text: FACS-sorted from thymus of Lck-cre mice

characteristic: sample type

text: DN3 thymocytes


characteristic: External Id

text: live

text: Generic

text: 6-7 weeks

text: DN3 thymocytes

characteristic: cell type

text: C57BL/6 backcrossed

text: Mus musculus

text: FACS-sorted from thymus of Drosha Lck-cre mice

text: DN3 thymocytes


characteristic: INSDC center name

text: live

text: Generic

text: 6-7 weeks

text: DN3 thymocytes

text: C57BL/6 backcrossed

text: Mus musculus

text: FACS-sorted from thymus of Dicer Lck-cre mice

text: DN3 thymocytes


text: live

text: Generic

text: 6-7 weeks

text: CD4+CD25+ Treg

text: C57BL/6 backcrossed

text: Mus musculus

text: FACS-sorted from spleen and lymph nodes of CD4-cre mice

text: CD4+CD25+ Treg


text: live

text: Generic

text: 6-7 weeks

text: CD4+CD25+ Treg

text: C57BL/6 backcrossed

text: Mus musculus

text: FACS-sorted from spleen and lymph nodes of Drosha CD4-cre mice

text: CD4+CD25+ Treg


text: live

text: Generic

text: 6-7 weeks

text: CD4+CD25+ Treg

text: C57BL/6 backcrossed

text: Mus musculus

text: FACS-sorted from spleen and lymph nodes of Dicer CD4-cre mice

text: CD4+CD25+ Treg


text: live

text: Generic

text: 6-7 weeks

text: CD4+ T cell

text: C57BL/6 backcrossed

text: Mus musculus

text: CD4+ T cell


text: live

text: Generic

text: 6-7 weeks

text: CD4+ T cell

text: C57BL/6 backcrossed

text: Mus musculus

text: CD4+ T cell


text: live

text: Generic

text: 6-7 weeks

text: CD4+ T cell

text: C57BL/6 backcrossed

text: Mus musculus

text: CD4+ T cell


text: live

text: Generic

text: 6-7 weeks

text: MEF

text: C57BL/6 backcrossed

text: Mus musculus

text: Derived from E14.5 Rosa26-CreER emybryos

text: MEF


text: live

text: Generic

text: 6-7 weeks

text: MEF

text: C57BL/6 backcrossed

text: Mus musculus

text: Derived from E14.5 Drosha Rosa26-CreER emybryos

text: MEF


text: live

text: Generic

text: 6-7 weeks

text: MEF

text: C57BL/6 backcrossed

text: Mus musculus

text: Derived from E14.5 Dicer Rosa26-CreER emybryos

text: MEF


text: Institute for Genome Sciences University of MD School of Medicine

text: live

text: Generic

text: Shigella boydii 965-58

characteristic: strain

text: Shigella boydii 965-58


characteristic: INSDC first public

text: live

text: Generic

text: Shigella flexneri CCH060

text: Shigella flexneri CCH060


characteristic: INSDC last update

text: live

text: Generic

text: Escherichia coli STEC_EH250

text: Escherichia coli STEC_EH250


text: State Key Laboratory of Bioelectronics, Southeast University

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: cell line

text: K562 cell was treated by PMA (10 ng/ml) for 2 hours

characteristic: cell treatment

text: human erythroleukemia cell

text: anti-EGR1 antibody (H-588, Santa Cruz Biotechnology)

characteristic: chip antibody

text: Homo sapiens

text: human erythroleukemia cell line K562

text: K562 cell_PMA treatment (10 ng/ml)_2 hours_EGR1_ChIPSeq


RL control

text: The Wistar Institute

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Random ligation control sample was prepared from wild type fission yeast strain SP1173 (h- leu1-32 his2 ura4 ade6-216) using the ELP method.

characteristic: description

text: Schizosaccharomyces pombe

text: Random ligation (RL) control sample


wt VSV (dataset 2)

text: Institut Pasteur

text: live

text: Generic

characteristic: SRA accession

text: Drosophila melanogaster

characteristic: organism

text: Small RNA Library from VSV-infected wild-type (w[1118]) flies (dataset 2)

characteristic: title


Dcr-2[L811FsX] VSV (dataset 2)

characteristic: External Id

text: Institut Pasteur

text: live

text: Generic

text: Drosophila melanogaster

text: Small RNA Library from VSV-infected Dcr-2[L811FsX] flies (dataset 2)


AGO2[414] VSV (dataset 2)

text: Institut Pasteur

text: live

text: Generic

text: Drosophila melanogaster

text: Small RNA Library from VSV-infected AGO2[414] flies (dataset 2)


text: live

text: Generic

text: Shigella flexneri K-218

text: Shigella flexneri K-218


text: U. Washington

text: live

text: Generic

text: Homo sapiens

text: H. Mole BAC sequencing


text: Sawyers, Human Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center

text: live

text: Generic

text: GIST

text: input control

characteristic: fraction

text: Homo sapiens

text: GIST48 Cells, input

text: input DNA


characteristic: INSDC center name

text: live

text: Generic

text: GIST

text: anti-ETV1 (Abcam Ab81086, lot#787879)

text: ChIP fraction

text: Homo sapiens

text: GIST48 Cells, ChIP fraction


text: live

text: Generic

text: Shigella flexneri K-227

characteristic: strain

text: Shigella flexneri K-227


characteristic: INSDC first public

text: live

text: Generic

text: Shigella flexneri K-272

text: Shigella flexneri K-272


characteristic: INSDC last update

text: live

text: Generic

text: Escherichia coli TX1999

text: Escherichia coli TX1999


characteristic: INSDC secondary accession

text: live

text: Generic

text: Shigella flexneri VA-6

text: Shigella flexneri VA-6


text: live

text: Generic

text: Shigella flexneri K-671

text: Shigella flexneri K-671


characteristic: Coriell panel

characteristic: DNA id

text: NCBI

text: live

text: Generic

text: Finnish in Finland

characteristic: Population Description

text: EUR

characteristic: Super Population Code

text: European

characteristic: Super Population Description

characteristic: culture collection

text: Human 1000 genomes individual HG00171

text: Homo sapiens

text: FIN

characteristic: population

text: unrelated

characteristic: relationship

text: female

characteristic: sex

text: Coriell HG00171


text: NCBI

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Finnish in Finland

characteristic: SRA accession

text: EUR

text: European

text: Human 1000 genomes individual HG00173

characteristic: description

text: Homo sapiens

characteristic: organism

text: FIN

text: unrelated

text: female

text: Coriell HG00173

characteristic: title


characteristic: External Id

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Finnish in Finland

text: EUR

text: European

text: Human 1000 genomes individual HG00174

text: Homo sapiens

text: FIN

text: unrelated

text: female

text: Coriell HG00174


characteristic: Coriell panel

characteristic: DNA id

text: NCBI

text: live

text: Generic

text: Finnish in Finland

characteristic: Population Description

text: EUR

characteristic: Super Population Code

text: European

characteristic: Super Population Description

text: Human 1000 genomes individual HG00176

text: Homo sapiens

text: FIN

text: unrelated

text: female

text: Coriell HG00176


text: NCBI

text: live

characteristic: INSDC status

text: Generic

text: Finnish in Finland

text: EUR

text: European

characteristic: culture collection

text: Human 1000 genomes individual HG00177

text: Homo sapiens

text: FIN

characteristic: population

text: unrelated

characteristic: relationship

text: female

characteristic: sex

text: Coriell HG00177


text: NCBI

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Finnish in Finland

characteristic: SRA accession

text: EUR

text: European

text: Human 1000 genomes individual HG00178

characteristic: description

text: Homo sapiens

characteristic: organism

text: FIN

text: unrelated

text: female

text: Coriell HG00178


characteristic: External Id

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Finnish in Finland

text: EUR

text: European

text: Human 1000 genomes individual HG00179

text: Homo sapiens

text: FIN

text: unrelated

text: female

text: Coriell HG00179

characteristic: title


characteristic: Coriell panel

characteristic: DNA id

text: NCBI

characteristic: INSDC secondary accession

text: live

text: Generic

text: Finnish in Finland

characteristic: Population Description

text: EUR

characteristic: Super Population Code

text: European

text: Human 1000 genomes individual HG00180

text: Homo sapiens

text: FIN

text: unrelated

text: female

text: Coriell HG00180


text: NCBI

text: live

characteristic: INSDC status

text: Generic

text: Finnish in Finland

text: EUR

text: European

characteristic: Super Population Description

characteristic: culture collection

text: Human 1000 genomes individual HG00181

text: Homo sapiens

text: FIN

characteristic: population

text: unrelated

characteristic: relationship

text: male

text: Coriell HG00181


text: NCBI

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Finnish in Finland

characteristic: SRA accession

text: EUR

text: European

text: Human 1000 genomes individual HG00182

characteristic: description

text: Homo sapiens

text: FIN

text: unrelated

text: male

characteristic: sex

text: Coriell HG00182


characteristic: External Id

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Finnish in Finland

text: EUR

text: European

text: Human 1000 genomes individual HG00183

text: Homo sapiens

characteristic: organism

text: FIN

text: unrelated

text: male

text: Coriell HG00183


characteristic: Coriell panel

characteristic: DNA id

text: NCBI

characteristic: INSDC secondary accession

text: live

text: Generic

text: Finnish in Finland

characteristic: Population Description

text: EUR

text: European

text: Human 1000 genomes individual HG00185

text: Homo sapiens

text: FIN

text: unrelated

text: male

text: Coriell HG00185

characteristic: title


text: NCBI

text: live

characteristic: INSDC status

text: Generic

text: Finnish in Finland

text: EUR

characteristic: Super Population Code

text: European

characteristic: Super Population Description

characteristic: culture collection

text: Human 1000 genomes individual HG00186

text: Homo sapiens

text: FIN

characteristic: population

text: unrelated

text: male

text: Coriell HG00186


text: NCBI

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Finnish in Finland

characteristic: SRA accession

text: EUR

text: European

text: Human 1000 genomes individual HG00187

characteristic: description

text: Homo sapiens

text: FIN

text: unrelated

characteristic: relationship

text: male

text: Coriell HG00187


characteristic: External Id

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Finnish in Finland

text: EUR

text: European

text: Human 1000 genomes individual HG00188

text: Homo sapiens

text: FIN

text: unrelated

text: male

characteristic: sex

text: Coriell HG00188


characteristic: Coriell panel

characteristic: DNA id

text: NCBI

characteristic: INSDC secondary accession

text: live

text: Generic

text: Finnish in Finland

characteristic: Population Description

text: EUR

text: European

text: Human 1000 genomes individual HG00189

text: Homo sapiens

characteristic: organism

text: FIN

text: unrelated

text: male

text: Coriell HG00189


text: NCBI

text: live

characteristic: INSDC status

text: Generic

text: Finnish in Finland

text: EUR

characteristic: Super Population Code

text: European

characteristic: Super Population Description

characteristic: culture collection

text: Human 1000 genomes individual HG00190

text: Homo sapiens

text: FIN

text: unrelated

text: male

text: Coriell HG00190

characteristic: title


canine GI metagenome

text: Medical Biofilm Research Institute

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: gut metagenome

text: Canine gastrointestinal metagenome


cat GI metagenome

characteristic: External Id

text: MR DNA

characteristic: INSDC center name

text: live

text: Generic

text: gut metagenome

text: feline cat gastrointestinal metagenome


Littorina saxatilis M ecotype

text: University of Sheffield, Department of Animal & Plant Sciences

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Normalized cDNA from a pool of 30 females M ecotype of Littorina saxatilis. 15 individuals from Thornwick Bay and 15 from Old Peak (Northeast England).

characteristic: description

text: Littorina saxatilis

text: An EST-based genome scan using 454 sequencing in the marine snail Littorina saxatilis: M ecotype


Littorina saxatilis H ecotype

text: live

text: Generic

text: Normalized cDNA from a pool of 30 females H ecotype of Littorina saxatilis. 15 individuals from Thornwick Bay and 15 from Old Peak (Northeast England).

text: Littorina saxatilis

text: An EST-based genome scan using 454 sequencing in the marine snail Littorina saxatilis: H ecotype


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: free living

characteristic: biotic relationship

text: Keywords: GSC:MIGS:2.1

text: Soil

characteristic: environment

characteristic: investigation type

text: Streptomyces violaceusniger Tu 4113

text: Streptomyces violaceusniger Tu 4113

characteristic: project name

text: aerobe

text: Tu 4113

characteristic: strain

text: Generic sample from Streptomyces violaceusniger Tu 4113


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: free living

text: New Zealand

characteristic: country

text: Keywords: GSC:MIGS:2.1

text: Fresh water, Hot spring

text: Ignisphaera aggregans DSM 17230

characteristic: organism

text: Ignisphaera aggregans AQ1.S1, DSM 17230

text: DSM 17230, JCM 13409

text: anaerobe

text: DSM 17230

text: Ignisphaera aggregans DSM 17230, complete genome.

text: heterotroph


text: Oral

characteristic: Body Sample Site

text: DOE-GEBA 2007

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Prodigal, GenePRIMP

characteristic: Gene Calling Method

text: Gram+

characteristic: Gram Staining

characteristic: Greengenes ID

text: Homo sapiens

characteristic: Host Name

text: live

text: Generic

characteristic: NCBI submission model

text: Yes

characteristic: Type Strain

text: free living

text: Gingival crevices

characteristic: body sample subsite

text: Keywords: GSC:MIGS:2.1

text: Human gingival crevice

characteristic: isolation site

text: gingival crevice

characteristic: isolation-source

text: Olsenella uli DSM 7084

text: Olsenella uli VPI, DSM 7084

text: DSM 7084, ATCC 49627

text: anaerobe

text: DSM 7084

characteristic: temperature optimum

text: Mesophile

characteristic: temperature range

text: Olsenella uli DSM 7084, complete genome.

characteristic: title

text: type strain of Olsenella uli

characteristic: type material


characteristic: External Id

text: Washington University Center for Genome Sciences

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: n

text: FMA:Feces

characteristic: body product

characteristic: collection date

text: USA

characteristic: country

text: Viral Human feces metagenome

characteristic: description

characteristic: elevation

text: ENVO:feces

text: ENVO:feces

text: ENVO:feces

text: F1T2;Mother F1T1;Mother

characteristic: family relationship

characteristic: host taxon id

characteristic: latitude

characteristic: longitude

text: human gut metagenome

characteristic: organism

text: 16S rDNA virome project

characteristic: project name

text: Viral Human feces metagenome


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission model

text: n

text: FMA:Feces

text: USA

text: Viral Human feces metagenome

text: ENVO:feces

text: ENVO:feces

text: ENVO:feces

text: F2T1;Sister F2M;Daughter

text: human gut metagenome

text: 16S rDNA virome project

text: Viral Human feces metagenome

characteristic: title


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: n

text: FMA:Feces

text: USA

text: Viral Human feces metagenome

text: ENVO:feces

text: ENVO:feces

text: ENVO:feces

text: F3T1;Mother F3T2;Mother

text: human gut metagenome

text: 16S rDNA virome project

text: Viral Human feces metagenome


text: DOE-GEBA 2007

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Prodigal, GenePRIMP

characteristic: Gene Calling Method

text: Gram+

characteristic: Gram Staining

characteristic: Greengenes ID

text: live

text: Generic

text: Yes

characteristic: Type Strain

text: free living

characteristic: biotic relationship

text: Russia

characteristic: country

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Fresh water

characteristic: environment

characteristic: investigation type

text: Lagoons from East Crimea, Arabat spit, USSR

characteristic: isolation site

text: lagoon water from East Crimea, Arabat spit

characteristic: isolation-source

text: Acetohalobium arabaticum DSM 5501

text: Acetohalobium arabaticum Z-7288, DSM 5501

text: DSM 5501, ATCC 49924

text: anaerobe

text: Halophile

characteristic: salinity

text: DSM 5501

characteristic: strain

characteristic: temperature optimum

text: Mesophile

characteristic: temperature range

text: Acetohalobium arabaticum DSM 5501, complete genome.

text: chemolithotroph

text: type strain of Acetohalobium arabaticum

characteristic: type material


characteristic: External Id

text: DOE-CSP 2010

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Prodigal 1.4, GenePRIMP

text: Gram-

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Nonsporulating

characteristic: Sporulation

text: free living

text: Rod-shaped

characteristic: cell shape

text: Keywords: GSC:MIGS:2.1

text: Marine

text: Motile

characteristic: motility

text: Shewanella baltica BA175

characteristic: organism

text: Shewanella baltica BA175

characteristic: project name

text: facultative

text: Mesophile

text: Shewanella baltica BA175, complete genome.

characteristic: title

text: heterotroph


characteristic: External Id

text: UNIL

text: live

text: Generic

text: 24 adult males were collected from 12 nests (two males per colony) throughout northeastern Argentina. All individuals were combined into a single pool and total RNA was extracted using Trizol (Invitrogen). Total mRNA was isolated using the OligoDirect mini mRNA extraction kit following the manufacturer’s suggested protocol (Qiagen). Double stranded cDNA libraries were constructed using the SMART cDNA synthesis kit (Clontech) following the manufacturer’s suggested protocol. Approximately 500 nanograms of mRNA was used as starting material. Each of the four cDNA libraries were then normalized using the TRIMMER kit (Evrogen).

characteristic: description

text: Solenopsis invicta

text: 24 adult males, 2 males per colony, Argentina


text: UNIL

text: live

text: Generic

text: The heads of ~100 workers and queens from five nests collected in Gainesville Florida were combined into a single pool and total RNA was extracted using Trizol (Invitrogen). Total mRNA was isolated using the OligoDirect mini mRNA extraction kit following the manufacturer’s suggested protocol (Qiagen). Double stranded cDNA libraries were constructed using the SMART cDNA synthesis kit (Clontech) following the manufacturer’s suggested protocol. Approximately 500 nanograms of mRNA was used as starting material. Each of the four cDNA libraries were then normalized using the TRIMMER kit (Evrogen).

text: Solenopsis invicta

text: 100 Solenopsis invicta worker and queen heads, Florida


text: UNIL

text: live

text: Generic

text: Total RNA was extracted from worker and queen pupae and adults (~200 total individuals) from 23 monogyne nests collected in Gainesville, Florida. RNA was extracted in three separate pools and subsequently combined into a single tube prior to mRNA purification. mRNA was isolated using the OligoDirect mini mRNA extraction kit following the manufacturer’s suggested protocol (Qiagen). Double stranded cDNA libraries were constructed using the SMART cDNA synthesis kit (Clontech) following the manufacturer’s suggested protocol. Approximately 500 nanograms of mRNA was used as starting material. Each of the four cDNA libraries were then normalized using the TRIMMER kit (Evrogen).

text: Solenopsis invicta

text: 200 Solenopsis invicta worker and queen pupae and adults from 23 monogyne nests, Florida


text: UNIL

text: live

text: Generic

text: Total RNA was extracted from worker and queen pupae and adults (~175 total individuals) from 27 polygyne nests collected in Gainesville, Florida. RNA was extracted in three separate pools and subsequently combined into a single tube prior to mRNA purification. mRNA was isolated using the OligoDirect mini mRNA extraction kit following the manufacturer’s suggested protocol (Qiagen). Double stranded cDNA libraries were constructed using the SMART cDNA synthesis kit (Clontech) following the manufacturer’s suggested protocol. Approximately 500 nanograms of mRNA was used as starting material. Each of the four cDNA libraries were then normalized using the TRIMMER kit (Evrogen).

text: Solenopsis invicta

text: 175 Solenopsis invicta worker and queen pupae and adults from 27 polygyne nests, Florida


text: Institute for Genome Sciences University of MD School of Medicine

text: live

text: Generic

text: Shigella flexneri K-1770

characteristic: strain

text: Shigella flexneri K-1770


characteristic: INSDC center name

text: live

text: Generic

text: Shigella flexneri 2850-71

text: Shigella flexneri 2850-71


characteristic: GOLD Stamp ID

text: Gram-

characteristic: Gram Staining

characteristic: Greengenes ID

text: Joint Genome Institute, U.S. Department of Energy

characteristic: INSDC first public

text: live

text: Generic

text: Yes

characteristic: Type Strain

text: free living

characteristic: biotic relationship

text: Rod-shaped

characteristic: collection date

text: Japan

characteristic: country

text: Keywords: GSC:MIGS:2.1

text: Fresh water, Hot spring

characteristic: environment

characteristic: investigation type

text: Hot spring from Kanagawa, Ohwakudani, Japan on 9/1993

characteristic: isolation site

text: hot spring

characteristic: isolation-source

text: Nonmotile

text: Vulcanisaeta distributa DSM 14429

text: 4.0 - 4.5

characteristic: ph

text: Vulcanisaeta distributa DSM 14429

text: DSM 14429, JCM 11212

text: anaerobe

text: DSM 14429

characteristic: temperature optimum

text: Hyperthermophile

characteristic: temperature range

text: Vulcanisaeta distributa DSM 14429, complete genome.

text: heterotroph

text: type strain of Vulcanisaeta distributa

characteristic: type material


Brown Planthopper

characteristic: External Id

text: Zhejiang University

characteristic: INSDC center name

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: The brown planthopper strain was originally collected from a rice field located in the Huajiachi Campus of Zhejiang University, Hangzhou, China. The offspring of a single female and were reared at 28 * 0.5C on rice seedlings (Xiushui 128) under a 12:12 h light:dark photoperiod.

characteristic: description

text: Nilaparvata lugens

characteristic: organism

text: Nilaparvata lugens--Brown Planthopper

characteristic: title


characteristic: INSDC first public

text: live

text: Generic

text: Methanosalsum zhilinae DSM 4017

text: Methanosalsum zhilinae DSM 4017

text: DSM 4017

characteristic: strain

text: Generic sample from Methanosalsum zhilinae DSM 4017


serum

text: DOE JGI

text: live

text: Generic

text: + serum

characteristic: culture media

text: Candida albicans SC5314 grown in media containing serum

text: Candida albicans SC5314

characteristic: secondary accessions

text: C. albicans SC5314 grown in media containing serum


text: Baylor College of Medicine

text: live

text: Generic

text: Drosophila melanogaster DGRP-237

text: Drosophila melanogaster

text: Drosophila melanogaster SRA sample SRS084987


text: Baylor College of Medicine

text: live

text: Generic

text: Drosophila melanogaster DGRP-359

text: Drosophila melanogaster

text: Drosophila melanogaster SRA sample SRS084988


text: BCM

text: live

text: Generic

text: Drosophila melanogaster DGRP-374

text: Drosophila melanogaster

text: Drosophila melanogaster DGRP 374


text: Baylor College of Medicine

text: live

text: Generic

text: Drosophila melanogaster DGRP-393

text: Drosophila melanogaster

text: Drosophila melanogaster SRA sample SRS084991


text: Baylor College of Medicine

text: live

text: Generic

text: Drosophila melanogaster DGRP-69

text: Drosophila melanogaster

text: Drosophila melanogaster SRA sample SRS084992


text: Baylor College of Medicine

text: live

text: Generic

text: Drosophila melanogaster DGRP-73

text: Drosophila melanogaster

text: Drosophila melanogaster SRA sample SRS084993


text: Baylor College of Medicine

text: live

text: Generic

text: Drosophila melanogaster DGRP-737

text: Drosophila melanogaster

text: Drosophila melanogaster SRA sample SRS084994


ypd

text: DOE JGI

text: live

text: Generic

text: YPD

text: Candida albicans SC5314 grown in YPD

text: Candida albicans SC5314

text: C. albicans SC5314 grown in YPD


text: Baylor College of Medicine

text: live

text: Generic

text: Drosophila melanogaster DGRP-783

text: Drosophila melanogaster

text: Drosophila melanogaster SRA sample SRS084996


text: Baylor College of Medicine

text: live

text: Generic

text: Drosophila melanogaster DGRP-83

text: Drosophila melanogaster

text: Drosophila melanogaster SRA sample SRS084997


text: Baylor College of Medicine

text: live

text: Generic

text: Drosophila melanogaster DGRP-897

text: Drosophila melanogaster

text: Drosophila melanogaster SRA sample SRS084998


text: DOE JGI

text: live

text: Generic

text: Candida albicans SC5314 grown in M199 medium at pH 4

text: Candida albicans SC5314

characteristic: ph

text: C. albicans SC5314 grown in M199 medium at pH 4


text: DOE JGI

text: live

text: Generic

text: Candida albicans SC5314grown in M199 medium at pH 8

text: Candida albicans SC5314

text: C. albicans SC5314 grown in M199 medium at pH 8


hOxi

text: DOE JGI

text: live

text: Generic

text: oxidative stress; H2O2

characteristic: assay

text: YPD

text: For the oxidative stress experiments, a saturated overnight culture of strain SC5314 was diluted into 800 mls of YPD medium to an OD600 of 0.1 and allowed to grow at 30*C until the culture reached an OD600 of ~1.0. At this point the culture was split into three 250ml cultures in separate 1L flasks. To these cultures, hydrogen peroxide (H2O2) was added to a final concentration of 5mM (high oxidative stress), 0.5mM (low oxidative stress) or omitted (untreated control). After 15 minutes of treatment at 30*C, the cells were harvested by vacuum filtration and immediately stored at -80*C.

text: Candida albicans SC5314

text: C. albicans SC5314 grown under high oxidative stress


lOxi

characteristic: External Id

text: DOE JGI

text: live

text: Generic

text: oxidative stress; H2O2

text: YPD

text: Candida albicans SC5314

text: C. albicans SC5314 grown under low oxidative stress


nOxi

text: DOE JGI

characteristic: INSDC center name

text: live

text: Generic

text: oxidative stress; H2O2

text: YPD

text: Candida albicans SC5314

text: C. albicans SC5314 grown under no oxidation stress (control)


cwdp

characteristic: Congo Red

text: DOE JGI

characteristic: INSDC last update

text: live

text: Generic

text: cell wall damage; congo red

text: YPD

text: For the cell wall damage experiments, a saturated overnight culture of strain SC5314 was diluted into 600 mls of YPD medium to an OD600 of 0.1 and allowed to grow at 30*C until the culture reached an OD600 of ~1.0. At this point the culture was split into 2- 250ml cultures in separate 1L flasks. To one of the cultures, a stock solution of Congo Red (Sigma Aldrich), dissolved in water, was added to a final concentration of 100 micrograms/microliter. An equal volume of water was added to the other 250 ml culture as an untreated control. After 2 hours of treatment at 30*C, the cells were harvested by centrifugation and immediately stored at -80*C for later RNA isolation.

text: Candida albicans SC5314

text: C. albicans SC5314 grown in cell wall damaging environment (Congo Red)


cwdm

text: DOE JGI

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: cell wall damage; congo red

text: YPD

text: Candida albicans SC5314

text: C. albicans SC5314 grown in non-cell wall damage environment (control)


nitroSp

characteristic: DPTA-NONOate

text: DOE JGI

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: nitrosative stress; DPTA-NONOate

text: YPD

text: For the nitrosative stress experiments, a saturated overnight culture of strain SC5314 was diluted into 600 mls of YPD 80mM HEPES pH7.5 to an OD600 of ~0.1 and allowed to grow at 30*C until an OD600 of ~1.0. At this point the culture was split into 2 - 250 ml cultures in separate 1L flasks. To one of the cultures, a 750mM stock solution of DPTA-NONOate (Cayman chemicals; dissolved in 10mM NaOH) was added to a final concentration of 1mM. An equal volume of 10mM NaOH was added to the other 250 ml culture as an untreated control. After 15 minutes of treatment at 30*C the cells were harvested by vacuum filtration and immediately stored at -80*C for later RNA isolation.

text: Candida albicans SC5314

text: C. albicans SC5314 grown under nitrosative stress


nitroSm

text: DOE JGI

text: live

text: Generic

characteristic: SRA accession

text: nitrosative stress; DPTA-NONOate

text: YPD

characteristic: description

text: Candida albicans SC5314

characteristic: organism

text: C. albicans SC5314 grown under non-nitrosative environment (control)


HMP131-454 Sample

text: J. Craig Venter Institute

characteristic: INSDC first public

text: live

text: MIGS.ba

text: Newbler v. 2.3

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

text: This strain was isolated from the human vaginal cavity

characteristic: estimated size

text: human-associated habitat [ENVO:00009003]

characteristic: feature

text: Level 2: High-Quality Draft28x

characteristic: finishing strategy (depth of coverage)

text: not determined

characteristic: geo loc name

characteristic: host taxid

text: not determined

text: not determined

characteristic: lat lon

text: biological product [ENVO:02000043]

characteristic: material

text: Vaginal

characteristic: misc_param: HMP body site

characteristic: misc_param: HMP supersite

text: not determined

characteristic: nucleic acid extraction

text: not determined

text: Ligilactobacillus salivarius ACS-116-V-Col5a

characteristic: project name

text: Reference Genome

text: not determined

characteristic: sequencing method

characteristic: sop

text: CCUG 59483

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Lactobacillus salivarius ACS-116-V-Col5a

characteristic: title


HMP127-454 Sample

characteristic: External Id

text: J. Craig Venter Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Newbler v. 2.3

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

characteristic: description

text: Level 2: High-Quality Draft78x;140

text: not determined

text: not determined

text: not determined

text: biological product [ENVO:02000043]

text: Vaginal

text: not determined

text: not determined

characteristic: organism

text: Lactobacillus delbrueckii bulgaricus PB2003/044-T3-4

text: Reference Genome

text: not determined

text: CCUG 59479

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4


text: Institute of Plant Physiology and Ecology, SIBS, CAS.

text: live

text: Generic

text: Two lab-scale 2.5-liter biogas digesters (Z7 and Z8) were operated anaerobically at 40*C，which were both inoculated from the slurry from a biogas plant in Qianwei Village (10). These two reactors were fed in a very similar way: every 7 days, 600ml biogas slurry was discharged from the two digesters and then 100g pig ordure, 300ml biogas and 100ml slurry from the biogas plant (water was added to 600ml ) was fed to the two digesters. However, additional 3g rice straw was only fed to Z7. The biogas slurry from the two digesters used for metagenomic analysis was sampled when the composition of the two microbial communities turned to be stable.

text: ecological metagenomes

text: Z7 biogas reactor metagenome


text: live

text: Generic

text: ecological metagenomes

text: Z8 biogas reactor metagenome


orchid - Phalaenopsis equestris

text: Department of Life Sciences, NCKU

text: live

text: Generic

text: Phalaenopsis equestris

text: whole genome shotgun sequence of Phalaenopsis equestris


text: USDA-ARS

text: live

text: Generic

text: 14-day-old calf fed milk replacer. Rumen fluid pH=5.74

text: Bos taurus

characteristic: host species

text: rumen fluid

characteristic: isolation source

text: bovine gut metagenome

characteristic: ph

text: Rumen fluid from Holstein bull calf#113


characteristic: External Id

text: USDA-ARS

text: live

text: Generic

text: 14-day-old calf fed milk replacer. Rumen fluid pH=6.63.

text: Bos taurus

text: rumen fluid

text: bovine gut metagenome

text: Rumen fluid from Holstein bull calf#118

characteristic: title


text: USDA-ARS

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: 42-day-old calf fed milk replacer. Rumen fluid pH=6.94.

text: Bos taurus

text: rumen fluid

text: bovine gut metagenome

text: Rumen fluid from Holstein bull calf#103


text: USDA-ARS

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: 42-day-old calf fed milk replacer. Rumen fluid pH=6.48

text: Bos taurus

text: rumen fluid

text: bovine gut metagenome

text: Rumen fluid from Holstein bull calf#114


text: The Queensland Brain Institute, The University of Queensland

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: adult

characteristic: developmental stage

text: Blattella germanica

text: ovaries

text: ovary

characteristic: tissue

text: Blattella germanica ovaries adult


text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: 6th instar nymph

text: Blattella germanica

text: whole body

text: whole body

text: Blattella germanica whole body 6th instar nymph


text: Sun Yat-Sen University

text: live

text: Generic

characteristic: cell line

text: nasopharyngeal carcinoma cell line

characteristic: cell type

text: Homo sapiens


text: Lemischka, Gene and Cell Medicine, Mt. Sinai School of Medicine

text: live

text: Generic

characteristic: antibody

characteristic: antibody catalog number

text: Millipore

characteristic: antibody manufacturer

text: Mus musculus

characteristic: organism

text: ES cell

text: CCE

characteristic: strain


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: Santa Cruz

text: Mus musculus

text: ES cell

text: CCE

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Allis Lab (RockefellerU)

text: Mus musculus

text: ES cell

text: CCE


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Bethyl

text: Mus musculus

text: ES cell

text: CCE


text: live

text: Generic

characteristic: NCBI submission package

text: Sigma

text: Mus musculus

text: ES cell

text: CCE


text: live

text: Generic

characteristic: SRA accession

text: Mus musculus

text: ES cell

text: CCE

text: Input DNA


text: live

text: Generic

text: Mus musculus

text: ES cell

text: CCE

text: Negative


NWS EST sequencing

text: University of São Paulo

text: live

text: Generic

text: Cochliomyia hominivorax

text: Deep sequencing of New World screw-worm transcripts to discover genes involved in insecticide resistance


text: Finished

characteristic: Current Finishing Status

text: DOE-CSP 2009

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Gram-

characteristic: Gram Staining

text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Biondi, Emanuele (Universita di Firenze)

characteristic: Source of Isolate

text: Nonsporulating

characteristic: Sporulation

text: Symbiotic

characteristic: biotic relationship

text: Rod-shaped

characteristic: cell shape

text: Emmanuele Biondi

characteristic: collected by

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Host, Plant root, Root nodule, Soil

characteristic: environment

characteristic: investigation type

text: Motile

characteristic: motility

text: Sinorhizobium meliloti AK83

text: Nitrogen cycle, Streptomycin resistant, Symbiotic

characteristic: phenotypes

text: Sinorhizobium meliloti AK83

characteristic: project name

text: aerobe

text: Mutualistic

characteristic: symbiotic relationship

text: 25 - 30C

characteristic: temperature optimum

text: Mesophile

characteristic: temperature range

text: Sinorhizobium meliloti AK83, complete genome.


characteristic: External Id

text: National Center for Genome Resources

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

characteristic: Medicago HapMap ID

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Tunisia

characteristic: line

text: Medicago truncatula

characteristic: organism

text: Medicago truncatula HM020-I

characteristic: title


text: National Center for Genome Resources

text: live

text: Generic

characteristic: description

text: Medicago truncatula

text: Generic sample from Medicago truncatula


text: DOE-CSP 2010

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Gram-

characteristic: Gram Staining

text: live

text: Generic

characteristic: Source of Isolate

text: Nonsporulating

characteristic: Sporulation

text: Symbiotic

characteristic: biotic relationship

text: Rod-shaped

characteristic: cell shape

text: Keywords: GSC:MIGS:2.1

text: Host, Plant root, Root nodule, Soil

characteristic: environment

characteristic: investigation type

text: Motile

characteristic: motility

text: Sinorhizobium meliloti BL225C

characteristic: phenotypes

text: Ensifer meliloti BL225C

characteristic: project name

text: aerobe

characteristic: strain

text: Mutualistic

characteristic: symbiotic relationship

text: 25 - 30C

text: Mesophile

text: Sinorhizobium meliloti BL225C, complete genome.


characteristic: External Id

text: Monash University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Mycobacterium avium subsp. paratuberculosis American bovine isolate K10

text: Mycobacterium avium subsp. paratuberculosis K-10

characteristic: organism

text: paratuberculosis

characteristic: subsp


ProjectK

text: Leiden University Medical Center

text: live

text: Generic

text: healthy human female

characteristic: description

text: blue

characteristic: eye color

text: red

characteristic: hair color

characteristic: height

text: Homo sapiens

text: female

characteristic: sex

text: human female

characteristic: title


characteristic: External Id

text: Institute for Genome Sciences University of MD School of Medicine

text: live

text: Generic

text: Shigella flexneri 2747-71

characteristic: strain

text: Shigella flexneri 2747-71


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Shigella flexneri 4343-70

text: Shigella flexneri 4343-70


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Shigella flexneri 2930-71

text: Shigella flexneri 2930-71


text: Stunnenberg, Molecular Biology, NCMLS Radboud University Nijmegen

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: anti-GFP

characteristic: antibody

text: Abcam

characteristic: antibody manufacturer

text: HeLa Kyoto cell line

characteristic: cell line

text: Homo sapiens

text: Antibody GFP Abcam (ab290-050); HeLa cells stably transfected with GATAD1-GFP BAC

characteristic: sample type

text: Human cervical carcinoma cell line

text: GATAD1-GFP_HeLa rep1

text: GATAD1-GFP BAC

characteristic: transfection


text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: anti-GFP

text: Abcam

text: HeLa Kyoto cell line

text: Homo sapiens

characteristic: organism

text: Antibody GFP Abcam (ab290-050); HeLa cells stably transfected with Sgf29-GFP BAC

text: Human cervical carcinoma cell line

text: Sgf29-GFP_HeLa rep1

text: Sgf29-GFP BAC


text: live

text: Generic

text: anti-GFP

text: Abcam

text: HeLa Kyoto cell line

text: Homo sapiens

text: Antibody GFP Abcam (ab290-050); HeLa cells stably transfected with BAP18-GFP BAC

text: Human cervical carcinoma cell line

text: BAP18-GFP_HeLa rep1

characteristic: title

text: BAP18-GFP BAC


characteristic: External Id

text: live

text: Generic

text: anti-GFP

text: Abcam

text: HeLa Kyoto cell line

text: Homo sapiens

text: Antibody GFP Abcam (ab290-050); HeLa cells stably transfected with TRRAP-GFP BAC

text: Human cervical carcinoma cell line

text: TRRAP-GFP_HeLa rep1

text: TRRAP-GFP BAC


text: live

text: Generic

text: anti-GFP

text: Abcam

text: HeLa Kyoto cell line

text: Homo sapiens

text: Antibody GFP Abcam (ab290-050); HeLa cells stably transfected with PHF8-GFP BAC

text: Human cervical carcinoma cell line

text: PHF8-GFP_HeLa rep1

text: PHF8-GFP BAC


text: live

text: Generic

text: anti-GFP

text: Abcam

text: HeLa Kyoto cell line

text: Homo sapiens

text: Antibody GFP Abcam (ab290-050); HeLa cells stably transfected with N-PAC-GFP BAC

text: Human cervical carcinoma cell line

text: N-PAC-GFP_HeLa rep1

text: N-PAC-GFP BAC


text: live

text: Generic

text: anti-GFP

text: HeLa Kyoto cell line

text: Homo sapiens

text: Antibody GFP (custom GFP antibody generously provided by Ina Poser); HeLa cells stably transfected with GATAD1-GFP BAC

text: Human cervical carcinoma cell line

text: GATAD1-GFP_HeLa rep2

text: GATAD1-GFP BAC


text: live

text: Generic

text: anti-GFP

text: Abcam

text: HeLa Kyoto cell line

text: Homo sapiens

text: Human cervical carcinoma cell line

text: Sgf29-GFP_HeLa rep2

text: Sgf29-GFP BAC


text: live

text: Generic

text: anti-GFP

text: Abcam

text: HeLa Kyoto cell line

text: Homo sapiens

text: Human cervical carcinoma cell line

text: BAP18-GFP_HeLa rep2

text: BAP18-GFP BAC


text: live

text: Generic

text: anti-GFP

text: Abcam

text: HeLa Kyoto cell line

text: Homo sapiens

text: Human cervical carcinoma cell line

text: TRRAP-GFP_HeLa rep2

text: TRRAP-GFP BAC


text: live

text: Generic

text: anti-GFP

text: Abcam

text: HeLa Kyoto cell line

text: Homo sapiens

text: Human cervical carcinoma cell line

text: PHF8-GFP_HeLa rep2

text: PHF8-GFP BAC


text: live

text: Generic

text: anti-GFP

text: custom GFP from Ina Poser

text: HeLa Kyoto cell line

text: Homo sapiens

text: Antibody GFP (custom GFP antibody generously provided by Ina Poser); HeLa cells stably transfected with N-PAC-GFP BAC

text: Human cervical carcinoma cell line

text: N-PAC-GFP_HeLa rep2

text: N-PAC-GFP BAC


text: live

text: Generic

text: anti-GFP

text: Abcam

text: HeLa Kyoto cell line

text: Homo sapiens

text: Antibody GFP Abcam (ab290-050); HeLa cells stably transfected with LRWD1-GFP BAC

text: Human cervical carcinoma cell line

text: LRWD1-GFP BAC


text: live

text: Generic

text: anti-GFP

text: Abcam

text: HeLa Kyoto cell line

text: Homo sapiens

text: Antibody GFP Abcam (ab290-050)

text: Human cervical carcinoma cell line


text: live

text: Generic

text: Diagenode

text: HeLa Kyoto cell line

text: Homo sapiens

text: Antibody H3K4me3 Diagenode (pAb-MEHAHS-024)

text: Human cervical carcinoma cell line


text: live

text: Generic

text: Upstate/Millipore

text: HeLa Kyoto cell line

text: Homo sapiens

text: Antibody H3K27me3 from Upstate/Millipore (07-449)

text: Human cervical carcinoma cell line


text: live

text: Generic

text: Abcam

text: HeLa Kyoto cell line

text: Homo sapiens

text: Antibody H3K9me3 from Abcam (Ab8898-100)

text: Human cervical carcinoma cell line


text: live

text: Generic

text: Diagenode

text: HeLa Kyoto cell line

text: Homo sapiens

text: Antibody H3K36me3 from Diagenode (CS-058-100)

text: Human cervical carcinoma cell line


text: live

text: Generic

text: Abcam

text: HeLa Kyoto cell line

text: Homo sapiens

text: Antibody H3K79me3 from Abcam (ab2621)

text: Human cervical carcinoma cell line


text: live

text: Generic

text: Diagenode

text: HeLa Kyoto cell line

text: Homo sapiens

text: Antibody H3K9/14Ac from Diagenode (pAb-ACHBHS-044)

text: Human cervical carcinoma cell line


text: live

text: MIGS.ba

text: not determined

characteristic: age

text: Celera Assembler 6.1

characteristic: assembly

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

text: not determined

characteristic: environment (feature)

text: not determined

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: not determined

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: not determined

characteristic: number of replicons

text: Shigella flexneri SFJ17B

text: not determined

characteristic: phenotype

text: Emerging Diarrheal Pathogens

characteristic: project name

text: not determined

characteristic: reference for biomaterial

characteristic: sequencing method

text: not determined

characteristic: serotype

text: not determined

characteristic: specific host

characteristic: strain

text: Shigella flexineri J1713


name: Calothrix sp. SC01 M231-4F-01-858 Sample

characteristic: External Id

text: J. Craig Venter Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Calothrix sp. SC01 sequencing

text: Calothrix rhizosoleniae SC01

characteristic: organism

text: Generic sample from Calothrix rhizosoleniae SC01

characteristic: title


donor 190-96

text: BC Cancer Agency Michael Smith Genome Sciences Centre

text: live

text: Generic

text: donor 190-96

characteristic: description

text: Homo sapiens

text: Generic sample from Homo sapiens


donor 190-94

text: live

text: Generic

text: donor 190-94

text: Homo sapiens

text: Generic sample from Homo sapiens


donor 190-97

text: live

text: Generic

text: donor 190-97

text: Homo sapiens

text: Generic sample from Homo sapiens


text: DOEM 2007

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Gram+

characteristic: Gram Staining

characteristic: Greengenes ID

text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Sporulating

characteristic: Sporulation

text: Yes

characteristic: Type Strain

text: free living

characteristic: biotic relationship

text: Rod-shaped

characteristic: cell shape

text: Canada

characteristic: country

text: Keywords: GSC:MIGS:2.1

text: Sludge

characteristic: environment

characteristic: investigation type

text: Sewage sludge in Canada

characteristic: isolation site

text: sludge

characteristic: isolation-source

text: Motile

characteristic: motility

text: [Clostridium] saccharolyticum WM1

text: Clostridium saccharolyticum WM1, DSM 2544

characteristic: project name

text: ATCC 35040, NRC 2533, DSM 2544

text: anaerobe

characteristic: temperature optimum

text: Mesophile

characteristic: temperature range

text: Clostridium saccharolyticum WM1, complete genome.

text: chemoorganotroph

text: type strain of Clostridium saccharolyticum

characteristic: type material


characteristic: External Id

text: Biostatistics and Computational Biology, Dana-Farber Cancer Institute and Harvard School of Public Health

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: 6-14 weeks

characteristic: age

characteristic: antibody

text: B cells

characteristic: cell type

text: wild type

characteristic: genome/variation

text: Mus musculus

characteristic: organism

text: mouse B cells

text: Cd19-cre X Paxip flox/flox

characteristic: strain

text: spleen

characteristic: tissue

characteristic: title

text: dextran

characteristic: treatment group


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: 6-14 weeks

text: B cells

text: PTIP-knockout

text: Mus musculus

text: mouse B cells

text: Cd19-cre X Paxip flox/flox

text: spleen

text: dextran


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: 6-14 weeks

text: Pol II (4H8)

text: B cells

text: wild type

text: Mus musculus

text: mouse B cells

text: Cd19-cre X Paxip flox/flox

text: spleen

text: dextran


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: 6-14 weeks

text: Pol II (4H8)

text: B cells

text: PTIP-knockout

text: Mus musculus

text: mouse B cells

text: Cd19-cre X Paxip flox/flox

text: spleen

text: dextran


text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 6-14 weeks

text: PTIP

text: B cells

text: wild type

text: Mus musculus

text: mouse B cells

text: Cd19-cre X Paxip flox/flox

text: spleen

text: dextran


text: live

text: Generic

characteristic: SRA accession

text: 6-14 weeks

characteristic: age

text: PTIP

text: B cells

text: PTIP-knockout

text: Mus musculus

text: mouse B cells

text: Cd19-cre X Paxip flox/flox

text: spleen

text: dextran


text: live

text: Generic

text: 6-14 weeks

text: PTIP

characteristic: antibody

text: B cells

characteristic: cell type

text: wild type

text: Mus musculus

text: mouse B cells

text: Cd19-cre X Paxip flox/flox

text: spleen

text: unstimulated


text: live

text: Generic

text: 6-14 weeks

text: PTIP

text: B cells

text: PTIP-knockout

characteristic: genome/variation

text: Mus musculus

characteristic: organism

text: mouse B cells

text: Cd19-cre X Paxip flox/flox

text: spleen

text: unstimulated


text: live

text: Generic

text: 6-14 weeks

text: rabbit IgG

text: B cells

text: wild type

text: Mus musculus

text: negative control

characteristic: sample type

text: mouse B cells

text: Cd19-cre X Paxip flox/flox

characteristic: strain

text: spleen

characteristic: tissue

text: dextran


characteristic: External Id

text: live

text: Generic

text: 6-14 weeks

text: B cells

text: PTIP-knockout

text: Mus musculus

text: mouse B cells

text: Cd19-cre X Paxip flox/flox

text: spleen

characteristic: title

text: interleukin-4 (IL4)

characteristic: treatment group


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: 6-14 weeks

text: B cells

text: wild type

text: Mus musculus

text: mouse B cells

text: Cd19-cre X Paxip flox/flox

text: spleen

text: interleukin-4 (IL4)


text: Hannon, CSHL

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Drosophila melanogaster

text: testes

text: testes


text: Hannon, CSHL

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Drosophila melanogaster

text: ovaries

text: ovaries


text: Hannon, CSHL

text: live

text: Generic

text: Drosophila melanogaster

text: testes

text: hs-Penelope

text: testes


text: Hannon, CSHL

text: live

text: Generic

text: Drosophila melanogaster

text: ovaries

text: hs-Penelope

text: ovaries

text: hs-Penelope_ ovaries_total


text: Hannon, CSHL

text: live

text: Generic

text: Drosophila virilis

text: ovaries

text: ovaries


text: Hannon, CSHL

text: live

text: Generic

text: Drosophila virilis

text: testes

text: testes


text: Hannon, CSHL

text: live

text: Generic

text: Drosophila virilis

text: testes

text: Argentina

text: testes


text: Hannon, CSHL

text: live

text: Generic

text: Drosophila virilis

text: ovaries

text: Argentina

text: ovaries


text: Hannon, CSHL

text: live

text: Generic

text: Drosophila virilis

text: embryos

text: embryos


text: Hannon, CSHL

text: live

text: Generic

text: Drosophila virilis

text: carcasses

text: carcasses


Kwan

text: U. Washington

text: live

text: Generic

text: Male silverback gorilla, Kwan from the Lincoln Park Zoo in Chicago, IL, USA

characteristic: description

text: Gorilla gorilla gorilla

text: male

characteristic: sex

text: Kwan


text: Ecole Polytechnique Federale de Lausanne, Switzerland

text: live

text: Generic

text: Thai-53 (DAF run no 15, on 24/10/2008, one lane)

text: Mycobacterium leprae

characteristic: organism

text: Thai-53 (Thailand)

text: Mycobacterium leprae Thai-53 (Thailand)


text: live

text: Generic

text: NHDP-63 (Mycobacterium leprae strain from Louisiana, US) (DAF run no 6, on 11/07/2008, 2 lanes)

text: Mycobacterium leprae

text: NHDP-63 (Louisiana, US)

text: Mycobacterium leprae NHDP-63 (Louisiana, US)


text: Genetics and Developmental Biology, University of Connecticut Health Center

text: live

text: Generic

text: Adult (0-2d post eclosion)

characteristic: developmental stage

text: RT and size selection

characteristic: library selection

text: RNA

characteristic: library source

text: Paired-End RNA-seq

characteristic: library strategy

text: Drosophila melanogaster x Drosophila sechellia

text: female

text: Drosophila melanogaster and Drosophila sechellia F1 hybrid

text: D.melanogaster strain 14021-0231.36 crossed to D. sechellia strain 14021-0248.25

text: whole fly


characteristic: External Id

text: Genetics and Genome Sciences, University of Connecticut Health Center

text: live

text: Generic

text: Adult (0-2d post eclosion)

text: RT and size selection

text: RNA

text: Paired-End RNA-seq

text: Drosophila melanogaster

text: female

text: Drosophila melanogaster and Drosophila sechellia Mixed RNA

text: D.melanogaster strain 14021-0231.36 and D. sechellia strain 14021-0248.25

characteristic: strain

text: whole fly

characteristic: tissue

characteristic: title


PEATSample

text: Duke University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Mixed stage fly embryos (0-24h) were collected according to a standard protocol. We used TRIzol reagent (Invitrogen) to extract total RNA. RNeasy Mini kit (QIAGEN) was used for cleanup and on-column DNase I digestion to remove genomic DNA according to the manufacturer's protocol. 150 μg purified RNA was enriched for poly(A)+ RNA with Dynabeads Oligo(dT)25 (Invitrogen) according to a modified protocol. 2 μg of poly(A)+ RNA was BAP/TAP (Bacterial Alkaline Phosphatase/Tobacco Acid Pyrophosphatase) treated and a chimeric linker tagged with a MmeI site was ligated to its 5' end. The RNeasy MinElute kit (QIAGEN) was used to remove excessive chimeric linkers. Random primers tagged with a MmeI recognition site were used to initiate reverse transcription. First strand cDNAs were amplified using 5 cycles of PCR, and the products were purified with DNA clean &amp; concentrator-5 kit (ZYMO). Circularization was performed with a collector oligonucleotide, which converts the PCR product into a single-stranded circular DNA. After Exo I (NEB) and Exo III (NEB) digestion to remove linear DNAs, rolling circle amplification (RCA) was performed to amplify the remaining circular DNAs. The RCA products were digested with MmeI (NEB) to generate a specific 93~95bp band. The desired product was ligated with two Illumina Paired-End adaptors and amplified with low-cycle PCR. After size-selection and validation by Sanger sequencing, the final library was sequenced using an Illumina GAII with a paired-end module.

text: Drosophila melanogaster

text: Drosophila melanogaster 0-24h mixed stage embryos


E. bieneusi 454

text: MBL

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Enterocytozoon bieneusi human isolate H348, karyotype H1

text: spore

characteristic: dev-stage

text: feces

characteristic: isolation-source

characteristic: karyotype

text: Homo sapiens

characteristic: nat-host

text: Enterocytozoon bieneusi H348

text: karyotype 1

text: Enterocytozoon bieneusi


B6-3H9 spleen

text: The Scripps Research Institute

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Total RNA was obtained from 2 male and 2 female's IgMb negative B cells. Site-directed 3H9 heavy chain transgenic mice (Chen et al., 1995; Chen et al., 1997) on a C57BL/6 background were kindly provided by Dr. M. Weigert (University of Chicago). BAFF and delta BAFF Tg mice on a C57BL/6 background have been previously described (Gavin et al., 2005). BAFF/3H9 and delta BAFF/3H9 double Tg mice were generated by breeding homozygous BAFF or delta BAFF Tg and 3H9 mice.

characteristic: description

text: Mus musculus

characteristic: organism

text: Kappa variable region


characteristic: External Id

text: Broad Institute

text: live

text: Generic

text: Bacteroides ovatus 3_8_47FAA

characteristic: sample name

characteristic: strain

text: Generic sample from Bacteroides ovatus 3_8_47FAA


Wyeomyia smithii default

text: University of Oregon

characteristic: INSDC center name

text: live

text: Generic

text: Wyeomyia smithii

text: Wyeomyia smithii unknown population

characteristic: title


text: University of Pennsylvania

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Homo sapiens

text: retina

characteristic: tissue

text: retina 1


name: 1 stage train, relaxed air exposure (1R)

text: Texas A&M University

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Bacterial community 16S rRNA sequences from an anaerobic mixed acid bioreactor system.

text: environmental samples

text: Intermittent Air Exposure on Four-Stage and One-Stage Anaerobic Semi- Continuous Mixed-Acid Fermentation Microbial Communities


name: 4 stage train, relaxed air exposure (4R)

text: Texas A&M University

text: live

text: Generic

text: environmental samples


characteristic: GOLD Stamp ID

text: Gram-

characteristic: Gram Staining

text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Rod-shaped

characteristic: cell shape

text: Keywords: GSC:MIGS:2.1

characteristic: investigation type

text: Motile

characteristic: motility

text: Escherichia coli W

text: Escherichia coli W

characteristic: project name

text: ATCC 9637

text: facultative

text: W

text: Mesophile

characteristic: temperature range

text: Generic sample from Escherichia coli W


1 stage train, strict air exposure (1S)

characteristic: External Id

text: Texas A&M University

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: description

text: environmental samples

characteristic: organism


4 stage train, strict air exposure (4S)

text: Texas A&M University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: environmental samples

characteristic: title


text: Institute for Genome Sciences University of MD School of Medicine

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Shigella sonnei 4822-66

characteristic: strain

text: Shigella sonnei 4822-66


text: live

text: Generic

text: Escherichia coli EPEC C342-62

text: EPEC C342-62

text: Escherichia coli EPEC C342-62


text: Institute for Genome SciencesUniversity of MD School of Medicine

text: live

text: Generic

characteristic: collection date

text: United Kingdom: England

characteristic: country

text: Homo sapiens

characteristic: host

text: Escherichia coli EPEC 32/73

text: EPEC 32/73

text: Escherichia coli EPEC 32/73


text: live

text: Generic

text: Shigella flexneri 6603-63

text: Shigella flexneri 6603-63


text: Denise Barlow, CeMM

text: live

text: Generic

text: differentiated ES cells induced by retinoic acid for 5 days

characteristic: cell type

text: DNA shearing

characteristic: fragmentation method

text: Mus musculus

text: 1 round

characteristic: rrna depletion

text: IMP Solexa Sequencing facility, Vienna

characteristic: sequencing facility

text: Day5 differentiated CCE

text: Ribominus total RNA from ES 1


characteristic: External Id

text: Denise Barlow, CeMM

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: RNA hydrolysis

text: Mus musculus

text: 1 round

text: IMP Solexa Sequencing facility, Vienna

text: Day5 differentiated CCE

text: Ribominus total RNA from ES 2


text: Denise Barlow, CeMM

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: DNA shearing

text: Mus musculus

characteristic: organism

text: 1 round

text: IMP Solexa Sequencing facility, Vienna

text: Day5 differentiated CCE

text: Ribominus total RNA from ES 3


text: Denise Barlow, CeMM

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: RNA hydrolysis

text: Mus musculus

text: 1 round

text: IMP Solexa Sequencing facility, Vienna

text: Day5 differentiated CCE

text: Ribominus total RNA from ES 4

characteristic: title


text: Denise Barlow, CeMM

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: DNA shearing

text: Mus musculus

text: 1 round

text: IMP Solexa Sequencing facility, Vienna

text: 14.5dpc fetal head

text: FVB/N

characteristic: strain

text: fetal head dissected from 14.5dpc mouse embryo

characteristic: tissue type

text: Ribominus total RNA from fetal head 1


text: Denise Barlow, CeMM

text: live

text: Generic

text: RNA hydrolysis

text: Mus musculus

text: 1 round

text: IMP Solexa Sequencing facility, Vienna

text: 14.5dpc fetal head

text: FVB/N

text: Ribominus total RNA from fetal head 2


text: Denise Barlow, CeMM

text: live

text: Generic

text: RNA hydrolysis

text: Mus musculus

text: 2 rounds

text: IMP Solexa Sequencing facility, Vienna

text: 14.5dpc fetal head

text: FVB/N

text: Ribominus total RNA from fetal head 3


text: Denise Barlow, CeMM

text: live

text: Generic

characteristic: cell type

text: DNA shearing

text: Mus musculus

text: 1 round

text: NCMLS Solexa Sequencing facility, Nijmegen

text: Day5 differentiated CCE

text: Ribominus total RNA from ES 5


text: Denise Barlow, CeMM

text: live

text: Generic

text: RNA hydrolysis

characteristic: fragmentation method

text: Mus musculus

text: 1 round

text: Day5 differentiated CCE

text: Ribominus total RNA from ES 6


text: Denise Barlow, CeMM

text: live

text: Generic

text: DNA shearing

text: Mus musculus

text: 1 round

characteristic: rrna depletion

text: Day5 differentiated CCE

text: Ribominus total RNA from ES 7


text: Denise Barlow, CeMM

text: live

text: Generic

text: RNA hydrolysis

text: Mus musculus

text: 1 round

characteristic: sequencing facility

text: Day5 differentiated CCE

text: Ribominus total RNA from ES 8


characteristic: External Id

text: Denise Barlow, CeMM

text: live

text: Generic

text: DNA shearing

text: Mus musculus

text: 1 round

text: 14.5dpc fetal head

text: FVB/N

text: Ribominus total RNA from fetal head 4


text: Denise Barlow, CeMM

text: live

text: Generic

characteristic: NCBI submission package

text: RNA hydrolysis

text: Mus musculus

text: 1 round

text: 14.5dpc fetal head

text: FVB/N

text: Ribominus total RNA from fetal head 5


text: Denise Barlow, CeMM

text: live

text: Generic

characteristic: SRA accession

text: RNA hydrolysis

text: Mus musculus

text: 2 rounds

text: 14.5dpc fetal head

text: FVB/N

text: Ribominus total RNA from fetal head 6


text: Denise Barlow, CeMM

characteristic: INSDC center name

text: live

text: Generic

text: RNA hydrolysis

text: Mus musculus

text: 1 round

text: Day5 differentiated CCE

text: Ribominus total RNA from ES 9


text: Denise Barlow, CeMM

characteristic: INSDC first public

text: live

text: Generic

text: RNA hydrolysis

text: Mus musculus

text: 1 round

text: Day5 differentiated CCE

text: Ribominus total RNA from ES 10


text: Denise Barlow, CeMM

text: live

text: Generic

text: RNA hydrolysis

text: Mus musculus

characteristic: organism

text: 1 round

text: Day5 differentiated CCE

text: Ribominus total RNA from ES 11


text: Denise Barlow, CeMM

characteristic: INSDC last update

text: live

text: Generic

text: RNA hydrolysis

text: Mus musculus

text: 1 round

text: 14.5dpc fetal head

text: FVB/N

text: Ribominus total RNA from fetal head 7


text: Denise Barlow, CeMM

characteristic: INSDC secondary accession

text: live

text: Generic

text: RNA hydrolysis

text: Mus musculus

text: 1 round

text: 14.5dpc fetal head

text: FVB/N

text: Ribominus total RNA from fetal head 8


text: Denise Barlow, CeMM

text: live

text: Generic

text: RNA hydrolysis

text: Mus musculus

text: 1 round

text: 14.5dpc fetal head

text: FVB/N

text: Ribominus total RNA from fetal head 9

characteristic: title


mice 3

text: Center for Genomic Regulation

text: live

characteristic: INSDC status

text: Generic

text: Heinz Himmelbauer (Center for Genomic Regulation)

characteristic: Submitter

text: adult mouse brain, C57BL/6J male

characteristic: description

text: Mus musculus

text: Mice brain


Gryllus cDNA

text: Harvard University

text: live

text: Generic

characteristic: NCBI submission model

text: Gryllus bimaculatus

text: [TEMPORARY TITLE] Gryllus cDNA


text: Università degli Studi di Verona

text: live

text: Generic

text: For the host-recognition stage, equal volumes of conidial suspensions containing the aforementioned concentrations of both A. quisqualis and P. xanthii were mixed and incubated for 24 hours at 25*C. Then, the conidia (50 mg) were collected by filtration on Purabind 08 filter paper (Whatmann; Dassel, Germany), frozen in liquid nitrogen and lyophilized (Heto LyoLab 3000, Thermo Scientific Heraeus; Loughborough, UK). For the early stages of parasitization, 10 ml of P. xanthii conidial suspension (1 * 104 conidia/ml) were sprayed on 30 zucchini plants that each had five true leaves. Plants were left to dry and then incubated overnight at 22*C and high RH (95-98%). When powdery mildew symptoms first appeared (14 days after inoculation), 15 of the plants were treated with 10 ml of A. quisqualis suspension (3.5 * 106 conidia/ml; 10 ml/plant) and 15 were sprayed with water (untreated control). The host-recognition and early-parasitization stages samples were pooled together, and the same quantity of A. quisqualis total RNA was added for each of the two stages (0.2 *g per pool).

text: Ampelomyces quisqualis

text: pool of A. quisqualis RNA from the host-recognition and early-parasitization stages


text: Università degli Studi di Verona

text: live

text: Generic

text: 10 ml of P. xanthii conidial suspension (1 * 104 conidia/ml) were sprayed on 30 zucchini plants that each had five true leaves. Plants were left to dry and then incubated overnight at 22*C and high RH (95-98%). When powdery mildew symptoms first appeared (14 days after inoculation), 15 of the plants were treated with 10 ml of A. quisqualis suspension (3.5 * 106 conidia/ml; 10 ml/plant) and 15 were sprayed with water (untreated control). RNA was extracted from the late parasitization stage at formation of mature pycnidia (0.2 *g) using the SV total RNA extraction kit (Promega; Milano, Italy) according to the manufacturer’s instructions.

text: Ampelomyces quisqualis

text: pool of A.quisqualis RNA from late parasitization stage


text: live

text: Generic

text: Brenneria sp. EniD312

text: Brenneria sp. EniD312

characteristic: strain

text: Generic sample from Brenneria sp. EniD312


text: Daniel Zilberman, Plant and Microbial Biology, University of California at Berkeley

text: live

text: Generic

text: Physcomitrium patens

text: Whole plants


text: Harvard University

text: live

text: Generic

text: Parhyale hawaiensis

text: [TEMPORARY] Parhyale hawaiensis ovarian and embryonic cDNA


text: BCM

text: live

text: Generic

text: Drosophila melanogaster DGRP-356

text: Drosophila melanogaster

text: Drosophila melanogaster DGRP 356


text: BCM

text: live

text: Generic

text: Drosophila melanogaster DGRP-377

text: Drosophila melanogaster

text: Drosophila melanogaster DGRP 377


text: BCM

text: live

text: Generic

text: Drosophila melanogaster DGRP-441

text: Drosophila melanogaster

text: Drosophila melanogaster DGRP 441


text: BCM

text: live

text: Generic

text: Drosophila melanogaster DGRP-563

text: Drosophila melanogaster

text: Drosophila melanogaster DGRP 563


text: Baylor College of Medicine

text: live

text: Generic

text: Drosophila melanogaster DGRP-589

text: Drosophila melanogaster

text: Drosophila melanogaster DGRP 589


text: Baylor College of Medicine

text: live

text: Generic

text: Drosophila melanogaster DGRP-892

text: Drosophila melanogaster

text: Drosophila melanogaster SRA sample SRS085335


text: Korea Institute of Science and Technology

text: live

text: Generic

text: The pylogenetic structure of the microbial community residing in samples obtained from pilot-scale membrane bioreactor (MBR) plants was analyzed by an integrated approach using metagenome sequence data obtained by 454-pyrosequencing method. DNA extracted from biomass sample in MBR.

text: uncultured bacterium

text: Phylogenetic Characterization of the Microbial Community in Pilot-scale Membrane Bioreactor Plants by 454-Pyrosequencing


text: live

text: Generic

text: The pylogenetic structure of the microbial community residing in samples obtained from pilot-scale membrane bioreactor (MBR) plants was analyzed by an integrated approach using metagenome sequence data obtained by 454-pyrosequencing method. DNA extracted from biofilm sample in MBR.

text: uncultured bacterium


text: live

text: Generic

text: The pylogenetic structure of the microbial community residing in samples obtained from pilot-scale membrane bioreactor (MBR) plants was analyzed by an integrated approach using metagenome sequence data obtained by 454-pyrosequencing method. DNA extracted from scum sample in MBR.

text: uncultured bacterium


name: Nucella lapillus TBT experimental control transcriptome

text: Bangor University

text: live

text: Generic

text: Nucella lapillus

text: Nucella lapillus control


name: Nucella lapillus TBT experimental TBT transcriptome

text: Bangor University

text: live

text: Generic

text: Nucella lapillus

text: Nucella lapillus TBT transcriptome


text: San Francisco State University

text: live

text: Generic

text: pooled mixture of Adult workers, Adult mated queens, Virgin queens, Pupae workers, Adult males, Adult worker head and antennae, and Embryos

text: Linepithema humile

text: Linepithema Humile


text: Center for Comparative Microbial Ecology

text: live

text: Generic

text: default

text: organismal metagenomes

text: rat gut microbiome default


text: Genetics and Developmental Biology, University of Connecticut Health Center

text: live

text: Generic

text: Drosophila melanogaster x Drosophila sechellia

text: female

characteristic: sex

text: Whole fly

text: Adult (0-2d post eclosion)

characteristic: stage

text: D.melanogaster strain 14021-0231.36 crossed to D. sechellia strain 14021-0248.25

text: whole fly

characteristic: tissue


characteristic: External Id

text: live

text: Generic

text: Drosophila melanogaster

text: female

text: Whole fly

text: Adult (0-2d post eclosion)

text: D.melanogaster strain 14021-0231.36 and D. sechellia strain 14021-0248.25

text: whole fly


text: Clinical Genetics Unit, Department of Obstetrics and Gynaecology, Universiti Putra Malaysia

text: live

text: Generic

characteristic: NCBI submission package

text: embryonic day 15.5

characteristic: developmental stage

text: Mus musculus

text: Whole brain, E15.5

text: whole brain


text: State Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology

characteristic: INSDC center name

text: live

text: Generic

characteristic: SRA accession

text: Wild-type

characteristic: genotype/variation

text: Oryza sativa

text: young seedlings

text: seedlings

text: Oryza sativa L. ssp. japonica Nipponbare seedlings sRNA


text: Joint Genome Institute, U.S. Department of Energy

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Truepera radiovictrix DSM 17093

text: Truepera radiovictrix DSM 17093

characteristic: organism

characteristic: sample number

text: DSM 17093

text: Generic sample from Truepera radiovictrix DSM 17093


text: Laboratory of Neurobiology, NIEHS, NIH

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Abgent

characteristic: antibody manufacturer

text: anti-Rpb1 (M01)

characteristic: chip antibody

text: Rattus norvegicus

text: Dissociated primary neurons

text: Sprague-Dawley

text: Neurons obtained from dissociated pre-natal cortices

characteristic: title


text: live

text: Generic

characteristic: NCBI submission model

text: Aciduliprofundum boonei T469

characteristic: description

text: Aciduliprofundum boonei T469

characteristic: strain

text: Generic sample from Aciduliprofundum boonei T469


characteristic: External Id

text: live

text: Generic

characteristic: NCBI submission package

text: Coniophora puteana RWD-64-598 SS-2

text: Coniophora puteana RWD-64-598 SS2

text: RWD-64-598 SS-2

text: Generic sample from Coniophora puteana RWD-64-598 SS2


characteristic: GOLD Stamp ID

text: Gram-

characteristic: Gram Staining

characteristic: Greengenes ID

characteristic: INSDC center name

text: live

text: Generic

text: Nonsporulating

characteristic: Sporulation

text: Yes

characteristic: Type Strain

text: free living

characteristic: biotic relationship

text: Spiral-shaped

characteristic: cell shape

text: Republic of the Congo

characteristic: country

text: Keywords: GSC:MIGS:2.1

text: Oil fields

characteristic: environment

characteristic: investigation type

text: Oil field of Congo, Africa

characteristic: isolation site

text: oil field

characteristic: isolation-source

text: Motile

characteristic: motility

text: Sediminispirochaeta smaragdinae DSM 11293

text: 7.0 - 7.2

characteristic: ph

text: Spirochaeta smaragdinae SEBR 4228, DSM 11293

characteristic: project name

text: DSM 11293

text: anaerobe

text: DSM 11293

characteristic: temperature optimum

text: Mesophile

characteristic: temperature range

text: Spirochaeta smaragdinae DSM 11293, complete genome.

text: type strain of Sediminispirochaeta smaragdinae

characteristic: type material


characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Geobacillus sp. C56-T2

characteristic: description

text: Geobacillus sp. C56-T2

characteristic: organism

characteristic: sample number

characteristic: strain

text: Generic sample from Geobacillus sp. C56-T2

characteristic: title


characteristic: INSDC center name

text: live

text: Generic

text: Desulfomonile tiedjei DSM 6799

text: Desulfomonile tiedjei DSM 6799

text: DSM 6799

text: Generic sample from Desulfomonile tiedjei DSM 6799


text: live

text: Generic

text: Micromonospora sp. L5

text: Micromonospora sp. L5

text: Generic sample from Micromonospora sp. L5


text: DOE-GEBA 2007

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Gram-

characteristic: Gram Staining

characteristic: Greengenes ID

text: live

text: Generic

text: Yes

characteristic: Type Strain

text: free living

characteristic: biotic relationship

characteristic: culture collection

text: Keywords: GSC:MIGS:2.1

text: Oil fields

characteristic: environment

characteristic: investigation type

text: Offshore oil field from Gulf of Guinea

characteristic: isolation site

text: off shore oil field from Gulf of Guinea

characteristic: isolation-source

text: Nonmotile

characteristic: motility

text: Methanolacinia petrolearia DSM 11571

characteristic: ph

text: Methanoplanus petrolearius SEBR 4847, DSM 11571

characteristic: project name

text: DSM 11571, OCM 486

text: anaerobe

text: DSM 11571

characteristic: temperature optimum

text: Mesophile

text: Methanoplanus petrolearius DSM 11571, complete genome.

text: type strain of Methanolacinia petrolearia


characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Thermaerobacter marianensis DSM 12885

characteristic: description

text: Thermaerobacter marianensis DSM 12885

characteristic: organism

characteristic: sample number

text: DSM 12885

characteristic: strain

text: Generic sample from Thermaerobacter marianensis DSM 12885

characteristic: title


characteristic: INSDC center name

text: live

text: Generic

text: Caulobacter segnis ATCC 21756

text: Caulobacter segnis ATCC 21756

text: ATCC 21756

text: Generic sample from Caulobacter segnis ATCC 21756


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Ethanoligenens harbinense YUAN-3

text: Ethanoligenens harbinense YUAN-3

text: Generic sample from Ethanoligenens harbinense YUAN-3


text: live

text: Generic

text: DSM 11270

text: Generic sample from Desulfonispora thiosulfatigenes DSM 11270


text: live

text: Generic

text: Cellulomonas flavigena DSM 20109

text: Cellulomonas flavigena DSM 20109

text: DSM 20109

text: Generic sample from Cellulomonas flavigena DSM 20109


text: live

text: Generic

text: Coriobacterium glomerans PW2

text: Coriobacterium glomerans PW2

text: Generic sample from Coriobacterium glomerans PW2


text: live

text: Generic

text: Arcanobacterium haemolyticum DSM 20595

text: Arcanobacterium haemolyticum DSM 20595

text: DSM 20595

text: Generic sample from Arcanobacterium haemolyticum DSM 20595


text: live

text: Generic

text: Rubrobacter radiotolerans DSM 5868

text: Rubrobacter radiotolerans DSM 5868

text: DSM 5868

text: Generic sample from Rubrobacter radiotolerans DSM 5868


text: live

text: Generic

text: Desulfarculus baarsii DSM 2075

text: Desulfarculus baarsii DSM 2075

text: DSM 2075

text: Generic sample from Desulfarculus baarsii DSM 2075


text: live

text: Generic

text: Syntrophothermus lipocalidus DSM 12680

text: Syntrophothermus lipocalidus DSM 12680

text: DSM 12680

text: Generic sample from Syntrophothermus lipocalidus DSM 12680


text: live

text: Generic

text: Generic sample from Dehalogenimonas lykanthroporepellens BL-DC-9


text: live

text: Generic

text: Sinorhizobium meliloti AK83

text: Sinorhizobium meliloti AK83

text: Generic sample from Sinorhizobium meliloti AK83


text: live

text: Generic

text: Intrasporangium calvum DSM 43043

text: Intrasporangium calvum DSM 43043

text: DSM 43043

text: Generic sample from Intrasporangium calvum DSM 43043


text: live

text: Generic

text: Hirschia baltica ATCC 49814

text: Hirschia baltica ATCC 49814

text: ATCC 49814

text: Generic sample from Hirschia baltica ATCC 49814


text: live

text: Generic

text: Methylotenera mobilis JLW8

text: Methylotenera mobilis JLW8

text: Generic sample from Methylotenera mobilis JLW8


text: live

text: Generic

text: Hyphomicrobium denitrificans ATCC 51888

text: Hyphomicrobium denitrificans ATCC 51888

text: ATCC 51888

text: Generic sample from Hyphomicrobium denitrificans ATCC 51888


text: live

text: Generic

text: Oceanithermus profundus DSM 14977

text: Oceanithermus profundus DSM 14977

text: DSM 14977

text: Generic sample from Oceanithermus profundus DSM 14977


text: live

text: Generic

text: Thermoanaerobacter ethanolicus CCSD1

text: Thermoanaerobacter ethanolicus CCSD1

text: Generic sample from Thermoanaerobacter ethanolicus CCSD1


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Clostridium papyrosolvens DSM 2782

text: Ruminiclostridium papyrosolvens DSM 2782

text: DSM 2782

text: Generic sample from Clostridium papyrosolvens DSM 2782


text: live

text: Generic

text: Mesorhizobium opportunistum WSM2075

text: Mesorhizobium opportunistum WSM2075

text: Generic sample from Mesorhizobium opportunistum WSM2075


text: live

text: Generic

text: Geobacillus sp. Y4.1MC1

text: Geobacillus sp. Y4.1MC1

text: Generic sample from Geobacillus sp. Y4.1MC1


text: live

text: Generic

text: Sulfurimonas autotrophica DSM 16294

text: Sulfurimonas autotrophica DSM 16294

text: DSM 16294

text: Generic sample from Sulfurimonas autotrophica DSM 16294


text: live

text: Generic

text: Nitrosomonas sp. AL212

text: Nitrosomonas sp. AL212

text: Generic sample from Nitrosomonas sp. AL212


text: live

text: Generic

text: Methanocaldococcus fervens AG86

text: Methanocaldococcus fervens AG86

text: Generic sample from Methanocaldococcus fervens AG86


text: live

text: Generic

text: Thermoanaerobacter sp. X561

text: Thermoanaerobacter sp. X561

text: Generic sample from Thermoanaerobacter sp. X561


text: live

text: Generic

text: Archaeoglobus profundus DSM 5631

text: Archaeoglobus profundus DSM 5631

text: DSM 5631

text: Generic sample from Archaeoglobus profundus DSM 5631


text: live

text: Generic

text: Aminobacterium colombiense DSM 12261

text: Aminobacterium colombiense DSM 12261

text: DSM 12261

text: Generic sample from Aminobacterium colombiense DSM 12261


text: live

text: Generic

text: DSM 571

text: Generic sample from Thermoanaerobacterium thermosaccharolyticum DSM 571


text: live

text: Generic

text: str. A3

text: Generic sample from Thermoanaerobacter mathranii subsp. mathranii str. A3


text: Institute of Oceanology, Chinese Academy of Sciences

text: live

text: Generic

text: The larvae of Meretrix meretrix experienced four major stages during development: trochophore, D-veliger, pediveliger and postlarva. Animals of these stages were collected and used for 454 sequencing.

text: Meretrix meretrix

text: Meretrix meretrix Larva: trochophore, D-veliger, pediveliger and postlarva


text: live

text: Generic

text: Thermoanaerobacter italicus Ab9

text: Thermoanaerobacter italicus Ab9

text: Generic sample from Thermoanaerobacter italicus Ab9


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Thermovirga lienii DSM 17291

text: Thermovirga lienii DSM 17291

text: DSM 17291

text: Generic sample from Thermovirga lienii DSM 17291


text: live

text: Generic

text: Thermodesulfatator indicus DSM 15286

text: Thermodesulfatator indicus DSM 15286

text: DSM 15286

text: Generic sample from Thermodesulfatator indicus DSM 15286


text: live

text: Generic

text: Vulcanisaeta distributa DSM 14429

text: Vulcanisaeta distributa DSM 14429

text: DSM 14429

text: Generic sample from Vulcanisaeta distributa DSM 14429


text: live

text: Generic

text: Ferroglobus placidus DSM 10642

text: Ferroglobus placidus DSM 10642

text: DSM 10642

text: Generic sample from Ferroglobus placidus DSM 10642


text: live

text: Generic

text: Clostridium carboxidivorans P7

text: Clostridium carboxidivorans P7

text: Generic sample from Clostridium carboxidivorans P7


text: live

text: Generic

text: Isosphaera pallida ATCC 43644

text: Isosphaera pallida ATCC 43644

text: ATCC 43644

text: Generic sample from Isosphaera pallida ATCC 43644


text: live

text: Generic

text: Desulfurivibrio alkaliphilus AHT2

text: Desulfurivibrio alkaliphilus AHT 2

text: Generic sample from Desulfurivibrio alkaliphilus AHT2


text: live

text: Generic

text: Gallionella capsiferriformans ES-2

text: Gallionella capsiferriformans ES-2

text: Generic sample from Gallionella capsiferriformans ES-2


text: live

text: Generic

text: Clostridium cellulovorans 743B

text: Clostridium cellulovorans 743B

text: Generic sample from Clostridium cellulovorans 743B


text: live

text: Generic

text: Aminomonas paucivorans DSM 12260

text: Aminomonas paucivorans DSM 12260

text: DSM 12260

text: Generic sample from Aminomonas paucivorans DSM 12260


text: live

text: Generic

text: Clostridium saccharolyticum WM1

text: [Clostridium] saccharolyticum WM1

text: Generic sample from Clostridium saccharolyticum WM1


text: live

text: Generic

text: Acetohalobium arabaticum DSM 5501

text: Acetohalobium arabaticum DSM 5501

text: DSM 5501

text: Generic sample from Acetohalobium arabaticum DSM 5501

text: type strain of Acetohalobium arabaticum

characteristic: type material


text: live

text: Generic

text: DSM 20463

text: Generic sample from Peptoniphilus asaccharolyticus DSM 20463


text: live

text: Generic

text: Clostridium thermocellum DSM 2360

text: contaminant of Clostridium thermocellum strain LQ8

characteristic: isolation-source

text: Acetivibrio thermocellus DSM 2360

text: DSM 2360

text: Generic sample from Clostridium thermocellum DSM 2360


text: live

text: Generic

text: Acidovorax delafieldii 2AN

text: Acidovorax delafieldii 2AN

text: Generic sample from Acidovorax delafieldii 2AN


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Allochromatium vinosum DSM 180

text: Allochromatium vinosum DSM 180

text: DSM 180

text: Generic sample from Allochromatium vinosum DSM 180


text: DOEM 2007

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Prodigal

characteristic: Gene Calling Method

text: Gram+

characteristic: Gram Staining

characteristic: Greengenes ID

text: live

text: Generic

text: isolated by anaerobic enrichment culture

characteristic: Source of Isolate

text: Sporulating

characteristic: Sporulation

text: free living

characteristic: biotic relationship

text: Rod-shaped

characteristic: cell shape

text: USA

characteristic: country

text: 2000 m

characteristic: depth

text: Keywords: GSC:MIGS:2.1

text: Fresh water

characteristic: environment

characteristic: investigation type

text: Deep subsurface location at the Piceance Basin, Colorado, USA

characteristic: isolation site

text: deep subsurface location at the Piceance Basin

text: Motile

characteristic: motility

text: Thermoanaerobacter sp. X513

text: Thermoanaerobacter sp. X513

characteristic: project name

text: anaerobe

characteristic: sequencing depth

characteristic: temperature optimum

text: Thermophile

characteristic: temperature range

text: Thermoanaerobacter sp. X513, complete genome.


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Methanocaldococcus vulcanius M7

characteristic: description

text: Methanocaldococcus vulcanius M7

characteristic: organism

characteristic: sample number

characteristic: strain

text: Generic sample from Methanocaldococcus vulcanius M7

characteristic: title


text: live

text: Generic

text: Methanocaldococcus infernus ME

text: Methanocaldococcus infernus ME

text: ME

text: Generic sample from Methanocaldococcus infernus ME


text: live

text: Generic

text: Thermosediminibacter oceani DSM 16646

text: Thermosediminibacter oceani DSM 16646

text: DSM 16646

text: Generic sample from Thermosediminibacter oceani DSM 16646


text: Casellas lab, NIAMS, NIH

text: live

text: Generic

text: 3 years

characteristic: age

text: centroblast

characteristic: cell type

text: female

characteristic: gender

text: fluorescence activated cell sorting

characteristic: isolation

text: Homo sapiens

text: tonsil

characteristic: source tissue

text: Human Centroblasts (Germinal Center B cells), Tonsil, FACS

text: Human centroblast [09-001]


characteristic: External Id

text: Casellas lab, NIAMS, NIH

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: 3 years

text: centrocyte

text: female

text: fluorescence activated cell sorting

text: Homo sapiens

text: tonsil

text: Human Centrocytes (Germinal Center B cells), Tonsil, FACS

text: Human centrocyte [09-001]


text: Casellas lab, NIAMS, NIH

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: 3 years

text: pre-germinal center B cell

text: female

text: fluorescence activated cell sorting

text: Homo sapiens

text: tonsil

text: Human Pre-Germinal Center B cells, Tonsil, FACS

text: Human pre-germinal center B cell [09-001]


text: Casellas lab, NIAMS, NIH

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: 3 years

text: plasma cell

text: female

text: fluorescence activated cell sorting

text: Homo sapiens

text: tonsil

text: Human Plasma cells, Tonsil, FACS

text: Human plasma cell [09-001]


text: Casellas lab, NIAMS, NIH

text: live

text: Generic

text: 5 years

text: naive B cell

text: female

text: fluorescence activated cell sorting

text: Homo sapiens

characteristic: organism

text: tonsil

text: Human Naive B cells, Tonsil, FACS

text: Human naive B cell [09-001]


text: Casellas lab, NIAMS, NIH

text: live

text: Generic

text: 5 years

text: memory B cell

text: female

text: fluorescence activated cell sorting

text: Homo sapiens

text: tonsil

text: Human Memory B cells, Tonsil, FACS

text: Human memory B cell [09-001]