KSU Georgia IT

text: Kansas State University

text: live

text: Generic

text: These samples represent Ion Torrent PGM generated locus targeted sequencing of the ITS-1 region from soil fungal communities in Georgia Piedmont Southern Yellow Pine forests of unburned, 3-year burn, and 6-year burn plots.

characteristic: description

text: Fungi

text: Examining Ion Torrent sequencing for applicability for soil fungal community analysis


status: PUBLIC

characteristic: External Id

text: LGP, NIDDK, NIH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Day of parturition within less than 12 hours after delivery

tag: attribute

characteristic: developmental stage

text: wild type

characteristic: genotype/variation

text: Mus musculus

characteristic: organism

text: Mammary tissues

text: Outbred

characteristic: strain

text: mammary gland

characteristic: tissue

text: Nfib-WT rep1

characteristic: title


text: LGP, NIDDK, NIH

text: live

text: Generic

text: wild type

text: Mus musculus

text: Mammary tissues

text: Outbred

text: mammary gland

text: Nfib-WT rep2


text: LGP, NIDDK, NIH

text: live

text: Generic

text: Nfib-null (KO)

text: Mus musculus

text: Mammary tissues

text: Outbred

text: mammary gland

text: Nfib-null rep1


text: LGP, NIDDK, NIH

text: live

text: Generic

text: Nfib-null (KO)

text: Mus musculus

text: Mammary tissues

text: Outbred

text: mammary gland

text: Nfib-null rep2


text: LGP, NIDDK, NIH

text: live

text: Generic

text: Nfib-null (KO)

text: Mus musculus

text: Mammary tissues

text: Outbred

text: mammary gland

text: Nfib-null rep3


text: Rubin / Pennacchio, Genomics Division, Lawrence Berkeley National Laboratory

text: live

text: Generic

text: p300 (rabbit polyclonal anti‐p300 (C‐20), Santa Cruz Biotechnology, catalog number = SC-585, Lot number = L2704)

characteristic: chip antibody

text: Mus musculus

text: Mouse embryonic day 11.5 (e11.5) forebrain

text: mouse forebrain


text: live

text: Generic

text: acCBP/p300 (rabbit polyclonal, Cell Signaling Technology, catalog number = 4771, lot number = 2)

text: Mus musculus

text: mouse postnatal (P0) cortex

text: mouse cortex


text: live

text: Generic

text: fetal (gestational week 20)

text: Homo sapiens

text: human fetal (gestational week 20) cortex

text: human cortex


Chipseq AN3 HB mock

text: VIB

text: live

text: Generic

text: Arabidopsis thaliana

text: Generic sample from Arabidopsis thaliana


Chipseq AN3 HB TAP

text: VIB

text: live

text: Generic

text: Arabidopsis thaliana


text: Conneely Laboratory, Molecular and Cellular Biology, Baylor College of Medicine

text: live

text: Generic

text: 10 weeks

characteristic: age

text: anti-PR (Santa Cruz, sc-7208)

text: female

characteristic: gender

text: wildtype

characteristic: genotype

text: Mus musculus

text: Mammary glands of 10-week-old wildtype mice treated with E+EP6h, PR ChIP

text: BALB/c

characteristic: strain/background

text: mammary gland

text: PR ChIP-seq, replicate 1

text: 17β-estradiol for 24 hours and then 17β-estradiol plus progesterone for 6 hrs

characteristic: treatment


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: 10 weeks

text: anti-PR (Santa Cruz, sc-7208)

text: female

text: wildtype

text: Mus musculus

text: BALB/c

text: mammary gland

text: PR ChIP-seq, replicate 2


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: 10 weeks

text: female

text: wildtype

text: Mus musculus

text: Mammary glands of 10-week-old wildtype mice treated with E+EP6h, input

text: BALB/c

text: mammary gland

text: Input, replicate 1


text: live

text: Generic

text: 10 weeks

text: female

text: wildtype

text: Mus musculus

characteristic: organism

text: BALB/c

text: mammary gland

characteristic: tissue

text: Input, replicate 2


text: University of Tennessee

text: live

text: Generic

text: stomach tissue

characteristic: body site

characteristic: collection date

text: wild winter alligator stomach tissue

characteristic: description

text: USA: Rockefeller Wildlife Refuge, Louisiana

characteristic: geo loc name

text: Alligator mississippiensis

text: wild

characteristic: rearing history

text: female

characteristic: sex

text: Generic sample from American alligator (Alligator mississippiensis)

characteristic: title


characteristic: External Id

text: University of Tennessee

characteristic: INSDC center name

text: live

text: Generic

text: duodenum

text: wild winter alligator duodenum

text: Alligator mississippiensis

text: wild

text: female


text: University of Tennessee

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: ileum

text: wild winter alligator ileum

text: Alligator mississippiensis

text: wild

text: female


text: University of Tennessee

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: colon

text: wild winter alligator colon

text: Alligator mississippiensis

text: wild

text: female


text: University of Tennessee

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: feces

text: wild winter alligator feces

text: Alligator mississippiensis

text: wild

text: female


text: University of Tennessee

text: live

text: Generic

characteristic: SRA accession

text: esophagus

text: wild spring alligator esophagus

text: Alligator mississippiensis

characteristic: organism

text: wild

text: male


text: University of Tennessee

text: live

text: Generic

text: gastric juice

characteristic: body site

text: wild spring alligator gastric juice

text: Alligator mississippiensis

text: wild

text: male


text: University of Tennessee

text: live

text: Generic

text: duodenum

characteristic: collection date

text: wild spring alligator duodenum

text: Alligator mississippiensis

text: wild

text: male


text: University of Tennessee

text: live

text: Generic

text: ileum

text: wild spring alligator ileum

characteristic: description

text: Alligator mississippiensis

text: wild

text: male


text: University of Tennessee

text: live

text: Generic

text: colon

text: wild spring alligator colon

characteristic: geo loc name

text: Alligator mississippiensis

text: wild

text: male


text: University of Tennessee

text: live

text: Generic

text: feces

text: wild spring alligator feces

text: Alligator mississippiensis

text: wild

characteristic: rearing history

text: male


text: University of Tennessee

text: live

text: Generic

text: stomach tissue

text: wild spring alligator stomach tissue

text: Alligator mississippiensis

text: wild

text: male

characteristic: sex


text: University of Tennessee

text: live

text: Generic

text: 1.5-2 years

characteristic: age

text: tongue

text: farm-raised winter alligator tongue

text: USA: southern Louisiana

text: Alligator mississippiensis

text: farm-raised

text: female

characteristic: title


characteristic: External Id

text: University of Tennessee

characteristic: INSDC center name

text: live

text: Generic

text: 1.5-2 years

text: stomach tissue

text: farm-raised winter alligator stomach tissue

text: USA: southern Louisiana

text: Alligator mississippiensis

text: farm-raised

text: female


text: University of Tennessee

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: 1.5-2 years

text: duodenum

text: farm-raised winter alligator duodenum

text: USA: southern Louisiana

text: Alligator mississippiensis

text: farm-raised

text: female


text: University of Tennessee

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: 1.5-2 years

text: ileum

text: farm-raised winter alligator ileum

text: USA: southern Louisiana

text: Alligator mississippiensis

text: farm-raised

text: female


text: University of Tennessee

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 1.5-2 years

text: colon

text: farm-raised winter alligator colon

text: USA: southern Louisiana

text: Alligator mississippiensis

text: farm-raised

text: female


text: University of Tennessee

text: live

text: Generic

characteristic: SRA accession

text: 1.5-2 years

text: feces

text: farm-raised winter alligator feces

text: USA: southern Louisiana

text: Alligator mississippiensis

characteristic: organism

text: farm-raised

text: female


text: University of Tennessee

text: live

text: Generic

text: 1.5-2 years

text: tongue

characteristic: body site

characteristic: collection date

text: farm-raised spring alligator tongue

text: USA: southern Louisiana

text: Alligator mississippiensis

text: farm-raised

text: female


text: University of Tennessee

text: live

text: Generic

text: 1.5-2 years

text: gastric juice

text: farm-raised spring alligator gastric juice

characteristic: description

text: USA: southern Louisiana

characteristic: geo loc name

text: Alligator mississippiensis

text: farm-raised

text: female


text: University of Tennessee

text: live

text: Generic

text: 1.5-2 years

text: duodenum

text: farm-raised spring alligator duodenum

text: USA: southern Louisiana

text: Alligator mississippiensis

text: farm-raised

characteristic: rearing history

text: female

characteristic: sex


text: University of Tennessee

text: live

text: Generic

text: 1.5-2 years

characteristic: age

text: ileum

text: farm-raised spring alligator ileum

text: USA: southern Louisiana

text: Alligator mississippiensis

text: farm-raised

text: female

characteristic: title


characteristic: External Id

text: University of Tennessee

characteristic: INSDC center name

text: live

text: Generic

text: 1.5-2 years

text: colon

text: farm-raised spring alligator colon

text: USA: southern Louisiana

text: Alligator mississippiensis

text: farm-raised

text: female


text: University of Tennessee

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: 1.5-2 years

text: feces

text: farm-raised spring alligator feces

text: USA: southern Louisiana

text: Alligator mississippiensis

text: farm-raised

text: female


text: University of Tennessee

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: 1.5-2 years

text: esophagus

text: farm-raised spring alligator esophagus

text: USA: southern Louisiana

text: Alligator mississippiensis

text: farm-raised

text: female


text: Fungal biology and pathogenicity, Institut Pasteur

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Hyphal development

characteristic: developmental stage

text: Candida albicans

characteristic: strain


text: live

text: Generic

characteristic: SRA accession

text: Hyphal development

characteristic: genotype/variation

text: Candida albicans

characteristic: organism


text: oil crops research institute, chinese academy of agricultural academy

text: live

text: Generic

text: Brassica oleracea

text: Callus tissues of Brassica oleracea

text: callus

characteristic: tissue

text: Bol-Callus


text: live

text: Generic

text: blooming in the same day

text: Brassica oleracea

text: Flower tissues of Brassica oleracea

text: flower

text: Bol-Flower


text: live

text: Generic

text: 7-week old

text: Brassica oleracea

text: Leaf tissues of Brassica oleracea

text: leaf

text: Bol-Leaf


text: live

text: Generic

text: 7-week old

text: Brassica oleracea

text: Root tissues of Brassica oleracea

text: root

text: Bol-Root


text: live

text: Generic

text: 15-day after pollination

text: Brassica oleracea

text: Silique tissues of Brassica oleracea

text: silique

text: Bol-Silique


text: live

text: Generic

text: 7-week old

text: Brassica oleracea

text: Stem tissues of Brassica oleracea

text: stem

text: Bol-Stem


text: live

text: Generic

text: Brassica oleracea

text: same size (length 0.8cm)

characteristic: phenotype

text: Bud tissues of Brassica oleracea

text: bud

text: Bol-Bud


text: University of California, Riverside

text: live

text: MIGS.eu

text: MIGS/MIMS/MIMARKS.plant-associated

text: greenhouse

characteristic: biome

characteristic: collection date

text: japonica

characteristic: cultivar

text: entire leaf

characteristic: description

text: MIGS/MIMS/MIMARKS.plant-associated

characteristic: env package

text: 375 Mb

characteristic: estimated size

text: greenhouse

characteristic: feature

text: USA

text: 33.9533 N 117.3953 E

text: eukaryote

characteristic: investigation type

text: greenhouse

characteristic: isolate

characteristic: label

text: leaf

characteristic: material

text: Oryza sativa Japonica Group

text: diploid

characteristic: ploidy

text: Oryza sativa Japonica A123 landrace sequencing

characteristic: project name

text: sexual

characteristic: propagation


characteristic: External Id

text: University of California, Riverside

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.eu

characteristic: NCBI submission model

text: MIGS/MIMS/MIMARKS.plant-associated

characteristic: NCBI submission package

characteristic: SRA accession

text: greenhouse

text: japonica

text: 1 cm leaf strip

text: MIGS/MIMS/MIMARKS.plant-associated

text: 375 Mb

text: greenhouse

text: USA

text: 33.9533 N 117.3953 E

text: eukaryote

text: greenhouse

text: leaf

text: Oryza sativa Japonica Group

characteristic: organism

text: diploid

text: sexual

characteristic: strain

characteristic: title


text: University of California, Riverside

text: live

text: MIGS.eu

text: MIGS/MIMS/MIMARKS.plant-associated

text: greenhouse

characteristic: biome

characteristic: collection date

text: japonica

characteristic: cultivar

text: 1 cm leaf strip

characteristic: description

text: MIGS/MIMS/MIMARKS.plant-associated

characteristic: env package

text: 375 Mb

characteristic: estimated size

text: greenhouse

characteristic: feature

text: USA

text: 33.9533 N 117.3953 W

text: eukaryote

characteristic: investigation type

text: greenhouse

characteristic: isolate

characteristic: label

text: leaf

text: Oryza sativa Japonica Group

text: diploid

text: sexual


characteristic: External Id

text: Centre National de la Recherche Scientifique - Information Genomique et Structurale

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Dugesia japonica

text: Dugesia japonica control 1


text: Plant and Environmental Protection Sciences, University of Hawaii at Manoa

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: early germination stage

characteristic: developmental stage

text: Alternaria brassicicola

characteristic: fungal pathogen

text: Arabidopsis thaliana

characteristic: infected host plant

text: Alternaria brassicicola

characteristic: organism

text: abpf2 deletion mutant

characteristic: pathogen genotype/variation

text: tissues containing both Arabidopsis thaliana plant leaves and Alternaria brassicicola fungal mycelia

characteristic: time

text: mixed tissues of plant leaves and fungal mycelia

characteristic: tissue

text: Δabpf2_48hpi reps1-3

characteristic: title


characteristic: External Id

text: live

text: Generic

text: early germination stage

text: Alternaria brassicicola

text: Arabidopsis thaliana

text: Alternaria brassicicola

text: wild type

text: wild type_48hpi reps1-3


text: Institute of Biophysics, Academy of Sciences of the Czech Republic

characteristic: INSDC center name

text: live

text: Generic

text: Rumex acetosa

text: R.acetosa - male leave DNA (parent)


characteristic: INSDC first public

text: live

text: Generic

text: Rumex acetosa

text: R.acetosa - female leave DNA (parent)


text: URMITE

characteristic: INSDC last update

text: live

text: Generic

text: metagenome

text: 16S microbiota analysis from V6 region of patient with AIDS


text: New England Biolabs

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: cell line

text: embryonic stem cell

characteristic: cell type

text: Mus musculus

characteristic: passage

text: embryonic stem cell (E14)


prog-maschio-a

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Rumex acetosa

text: R.acetosa - male leave DNA (child)


prog-femmina-b

text: live

text: Generic

text: Rumex acetosa

characteristic: organism

text: R.acetosa - female leave DNA (child)


text: live

text: Generic

text: Rumex acetosa

text: R. acetosa female cDNA (parent)


text: live

text: Generic

text: Rumex acetosa

text: R. acetosa male cDNA (parent)


text: Zhejiang University

text: live

text: Generic

characteristic: ecotype

text: Arabidopsis thaliana

text: Root

text: Low Mg2+ 7 days treatment

characteristic: treatment


text: Zhejiang University

text: live

text: Generic

text: Arabidopsis thaliana

text: Root

characteristic: tissue

text: High Mg2+ 7 days treatment


text: Elaine Fuchs, Rockefeller University

text: live

text: Generic

characteristic: age

text: Hair follicle stem cells (HfSCs)

text: female

characteristic: gender

text: Mus musculus

text: integrin α6 and CD34

characteristic: sorting markers

text: HfSCs_input DNA

characteristic: strain

text: Mouse back skin

text: input DNA_replicate1

characteristic: title


characteristic: External Id

text: Elaine Fuchs, Rockefeller University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Hair follicle stem cells (HfSCs)

text: NFIB

characteristic: chip antibody

text: Active Motif

characteristic: chip antibody vendor

text: female

text: Mus musculus

text: integrin α6 and CD34

text: Mouse back skin


text: Elaine Fuchs, Rockefeller University

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Hair follicle stem cells (HfSCs)

characteristic: cell type

text: female

text: Mus musculus

text: integrin α6 and CD34

text: HfSCs_input DNA

text: Mouse back skin

text: input DNA_replicate2


text: JCVI

text: live

text: Generic

text: This study reports on the effect of pCO2, light/dark cycle and ammonium vs nitrate, on the whole E. huxleyiÂs transcriptome

characteristic: description

text: Emiliania huxleyi CCMP371

characteristic: organism

text: Generic sample from Emiliania huxleyi


text: JCVI

text: live

text: Generic

text: Emiliania huxleyi

text: Generic sample from Emiliania huxleyi


text: State Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology

text: live

text: Generic

text: Columbia

characteristic: ecotype

text: wild type

characteristic: genotype/variation

text: Arabidopsis thaliana

text: WT_12DAG seedlings

text: 12DAG seedlings

characteristic: tissue

text: WT RNA-seq


characteristic: External Id

text: live

text: Generic

text: Columbia

text: not2 mutant

text: Arabidopsis thaliana

text: not2_12DAG seedlings

text: 12DAG seedlings

text: not2 RNA-seq

characteristic: title


text: Shen, Neuroscience, Icahn School of Medicine at Mount Sinai

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Mus musculus

text: NAc dissection from 3-5 animals

characteristic: strain

text: nucleus accumbens

text: DNA input2

text: Repeated saline I.P. injection for 1w as control

characteristic: treatment


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Mus musculus

text: NAc dissection from 3-5 animals

text: nucleus accumbens

text: DNA input3


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Mus musculus

text: NAc dissection from 3-5 animals

text: nucleus accumbens

text: DNA input4


text: US Army Edgewood Chemical Biological Center

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Bacillus atrophaeus 1013-1

text: Bacillus atrophaeus subsp. globigii str. 1013-1


text: Molecular Mycology Laboratory,, Molecular Biology and Genetics Unit, Jawaharlal Nehru Centre for Advanced Scientific Research

text: live

text: Generic

text: none (input)

characteristic: chip antibody

text: Log phase grown C. albicans cells

characteristic: growth conditions

text: YPDU

characteristic: media

text: Candida albicans

text: C.albicans strain J181, Input


text: live

text: Generic

text: Polyclonal anti-Cse4 antibodies (Sanyal K & Carbon J PNAS 99, 12969 - 12974 (2002))

text: Log phase grown C. albicans cells

text: YPDU

text: Candida albicans

characteristic: organism

characteristic: protein

text: C.albicans strain J181, IP

text: CENP-A ChIPSeq_JT11+68


characteristic: External Id

text: live

text: Generic

text: none (input)

text: Log phase grown C. albicans cells

text: YPDU

text: Candida albicans

text: C.albicans strain J191, Input


text: live

text: Generic

text: Log phase grown C. albicans cells

text: YPDU

text: Candida albicans

text: C.albicans strain J191, IP

text: CENP-A ChIPSeq_JT15

characteristic: title


characteristic: INSDC center name

text: live

text: Generic

text: none (input)

text: Log phase grown C. albicans cells

text: YPDU

text: Candida albicans

text: C.albicans strain J227, Input


characteristic: INSDC first public

text: live

text: Generic

text: Log phase grown C. albicans cells

text: YPDU

text: Candida albicans

text: C.albicans strain J227, IP

text: CENP-A ChIPSeq_JT20


text: live

text: Generic

text: none (input)

text: Log phase grown C. albicans cells

text: YPSU

text: Candida albicans

text: C.albicans strain J178, Input

characteristic: strain


text: live

text: Generic

text: Anti- Myc antibodies (Calbiochem, Cat # OP10L)

text: Log phase grown C. albicans cells

text: YPSU

text: Candida albicans

text: Myc-CENP-C

text: C.albicans strain J178, IP

text: CENP-A ChIPSeq_JT41


text: live

text: Generic

text: none (input)

text: Log phase grown C. albicans cells

text: YPDU

text: Candida albicans

text: C.albicans RM1000AH, Input


text: live

text: Generic

text: Anti-Prot A (Sigma, Cat# P2921)

text: Log phase grown C. albicans cells

text: YPDU

text: Candida albicans

text: Prot A CENP-A/Cse4

text: C.albicans RM1000AH, IP

text: CENP-A ChIPSeq_JT45


text: live

text: Generic

text: none (input)

text: Log phase grown C. albicans cells

text: YPDU

text: Candida albicans

text: C.albicans strain J225, Input


text: live

text: Generic

text: Anti-Prot A (Sigma, Cat# P2921)

text: Log phase grown C. albicans cells

text: YPDU

text: Candida albicans

text: Prot A CENP-A/Cse4

text: C.albicans strain J225, IP

text: CENP-A ChIPSeq_JT53


text: live

text: Generic

text: none (input)

text: Log phase grown C. albicans cells

text: YPDU

text: Candida albicans

text: C.albicans strain J226, Input


text: live

text: Generic

text: Anti-Prot A (Sigma, Cat# P2921)

text: Log phase grown C. albicans cells

text: YPDU

text: Candida albicans

text: Prot A CENP-A/Cse4

text: C.albicans strain J226, IP

text: CENP-A ChIPSeq_JT55


text: live

text: Generic

text: Bacillus atrophaeus 1013-2

text: Bacillus atrophaeus subsp. globigii str. 1013-2


text: live

text: Generic

text: Yersinia pestis biovar Orientalis str. AS200901156


text: live

text: Generic

text: Yersinia pestis biovar Orientalis str. AS200901434


text: live

text: Generic

text: Yersinia pestis biovar Orientalis str. AS200901509


text: live

text: Generic

text: Yersinia pestis biovar Orientalis str. AS200901539


text: live

text: Generic

text: Yersinia pestis biovar Orientalis str. BA200901703


text: live

text: Generic

text: Yersinia pestis biovar Orientalis str. BA200901799


text: live

text: Generic

text: Yersinia pestis biovar Orientalis str. BA200901990


text: live

text: Generic

text: Yersinia pestis biovar Orientalis str. BA200902009


text: live

text: Generic

text: Yersinia pestis biovar Orientalis str. AS200902147


text: live

text: Generic

text: Escherichia coli O104:H4 str. 2011C-3493


text: live

text: Generic

text: Escherichia coli O104:H4 str. 2009EL-2050

text: E. coli O104:H4

characteristic: serovar


text: US Army Edgewood Chemical Biological Center

characteristic: INSDC last update

text: live

text: Generic

text: Stool

characteristic: isolation source

text: Escherichia coli O104:H4 str. 2009EL-2071

text: E. coli O104:H4


Lavage

text: University of Illinois

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: 454 pyrosequencing of the 16S rRNA gene amplicons from vaginal lavage samples

characteristic: description

text: Homo sapiens

text: Vaginal microbiome


text: Rickard Sandberg's group (rickard.sandberg@ki.se), Karolinska Institutet

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: TH-positive neurons

characteristic: cell type

text: homozygous Nurr1-floxed, heterozygous BAC-DAT-CreER T2

characteristic: genotype/variation

text: Mus musculus

text: Substantia nigra TH1+ neurons, Nurr1 cKO

characteristic: strain/background

text: substantia nigra

characteristic: tissue

text: Substantia nigra dopaminergic neurons, Nurr1 cKO 1


characteristic: External Id

text: live

text: Generic

text: TH-positive neurons

text: Mus musculus

characteristic: organism

text: substantia nigra

text: Substantia nigra dopaminergic neurons, Nurr1 cKO 2

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: TH-positive neurons

text: Mus musculus

text: substantia nigra

text: Substantia nigra dopaminergic neurons, Nurr1 cKO 3


characteristic: INSDC last update

text: live

text: Generic

text: TH-positive neurons

text: Mus musculus

text: substantia nigra

text: Substantia nigra dopaminergic neurons, Nurr1 cKO 4


text: live

text: Generic

text: TH-positive neurons

text: Mus musculus

text: substantia nigra

text: Substantia nigra dopaminergic neurons, Nurr1 cKO 5


text: live

text: Generic

text: TH-positive neurons

text: Mus musculus

text: substantia nigra

text: Substantia nigra dopaminergic neurons, Nurr1 cKO 6


text: live

text: Generic

text: TH-positive neurons

text: homozygous Nurr1-floxed

text: Mus musculus

text: Substantia nigra TH1+ neurons, control

text: substantia nigra

text: Substantia nigra dopaminergic neurons, control 1


text: live

text: Generic

text: TH-positive neurons

text: homozygous Nurr1-floxed

text: Mus musculus

text: Substantia nigra TH1+ neurons, control

text: substantia nigra

text: Substantia nigra dopaminergic neurons, control 2


text: live

text: Generic

text: TH-positive neurons

text: homozygous Nurr1-floxed

text: Mus musculus

text: Substantia nigra TH1+ neurons, control

text: substantia nigra

text: Substantia nigra dopaminergic neurons, control 3


text: live

text: Generic

text: TH-positive neurons

text: Mus musculus

text: Ventral tagmental area TH1+ neurons, Nurr1 cKO

text: ventral tagmental area

text: Ventral tagmental area dopaminergic neurons, Nurr1 cKO 1


text: live

text: Generic

text: TH-positive neurons

text: Mus musculus

text: ventral tagmental area

text: Ventral tagmental area dopaminergic neurons, Nurr1 cKO 2


text: live

text: Generic

text: TH-positive neurons

text: Mus musculus

text: ventral tagmental area

text: Ventral tagmental area dopaminergic neurons, Nurr1 cKO 3


text: live

text: Generic

text: TH-positive neurons

text: homozygous Nurr1-floxed

text: Mus musculus

text: Ventral tagmental area TH1+ neurons, control

text: ventral tagmental area

text: Ventral tagmental area dopaminergic neurons, control 1


text: Rickard Sandberg's group (rickard.sandberg@ki.se), Karolinska Institutet

text: live

text: Generic

text: TH-positive neurons

text: homozygous Nurr1-floxed

text: Mus musculus

text: ventral tagmental area

text: Ventral tagmental area dopaminergic neurons, control 2


text: live

text: Generic

text: TH-positive neurons

text: homozygous Nurr1-floxed

text: Mus musculus

text: ventral tagmental area

text: Ventral tagmental area dopaminergic neurons, control 3


text: Institute for Genome Sciences University of MD School of Medicine

text: live

text: Generic

text: Chlamydia psittaci 10_1398_11

characteristic: strain

text: Chlamydia psittaci 10139811


text: Institute of Hydrobiology, Chinese Academy of Sciences

text: live

text: Generic

text: whole body

characteristic: body site

text: larva

characteristic: dev-stage

text: Danio rerio

text: AB line

text: Generic sample from Danio rerio


text: Research Institute of Physical-Chemical Medicine, Moscow, Russia

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.ba-cl

text: Research Institute of Phthisiopulmonology, St. Petersburg, Russia; St. Petersburg Pasteur Institute, St. Petersburg, Russia

characteristic: collected-by

characteristic: collection date

text: Russia: Saint Petersburg

characteristic: geo loc name

text: tuberculosis

characteristic: host-disease

text: sputum

characteristic: isolation-source

text: Mycobacterium tuberculosis SP1

text: Homo sapiens

characteristic: specific host

text: Pathogen bacterial, clinical or host-associated sample from Mycobacterium tuberculosis


characteristic: External Id

text: live

text: Pathogen.ba-cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Russia: Saint Petersburg

text: tuberculosis

text: sputum

text: Mycobacterium tuberculosis SP2

text: Homo sapiens


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.ba-cl

text: Russia: Saint Petersburg

text: tuberculosis

text: sputum

text: Mycobacterium tuberculosis SP3

characteristic: organism

text: Homo sapiens

characteristic: title


characteristic: INSDC last update

text: live

text: Pathogen.ba-cl

text: Russia: Saint Petersburg

text: tuberculosis

text: sputum

text: Mycobacterium tuberculosis SP4

text: Homo sapiens

characteristic: strain


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.ba-cl

text: Russia: Saint Petersburg

text: tuberculosis

text: sputum

text: Mycobacterium tuberculosis SP5

text: Homo sapiens


text: live

text: Pathogen.ba-cl

characteristic: collected-by

characteristic: collection date

text: Russia: Saint Petersburg

text: tuberculosis

text: sputum

text: Mycobacterium tuberculosis SP6

text: Homo sapiens


text: live

text: Pathogen.ba-cl

text: Russia: Saint Petersburg

characteristic: geo loc name

text: tuberculosis

characteristic: host-disease

text: sputum

text: Mycobacterium tuberculosis SP7

text: Homo sapiens


text: live

text: Pathogen.ba-cl

text: Russia: Saint Petersburg

text: tuberculosis

text: sputum

characteristic: isolation-source

text: Mycobacterium tuberculosis SP8

text: Homo sapiens

characteristic: specific host


characteristic: External Id

text: live

text: Pathogen.ba-cl

characteristic: NCBI submission model

text: Russia: Saint Petersburg

text: tuberculosis

text: sputum

text: Mycobacterium tuberculosis SP9

text: Homo sapiens


text: live

text: Pathogen.ba-cl

characteristic: NCBI submission package

characteristic: SRA accession

text: Russia: Saint Petersburg

text: tuberculosis

text: sputum

text: Mycobacterium tuberculosis SP10

text: Homo sapiens


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.ba-cl

text: Russia: Saint Petersburg

text: tuberculosis

text: sputum

text: Mycobacterium tuberculosis SP11

text: Homo sapiens


text: live

text: Pathogen.ba-cl

text: Russia: Saint Petersburg

text: tuberculosis

text: sputum

text: Mycobacterium tuberculosis SP12

characteristic: organism

text: Homo sapiens

characteristic: title


characteristic: INSDC last update

text: live

text: Pathogen.ba-cl

text: Russia: Saint Petersburg

text: tuberculosis

text: sputum

text: Mycobacterium tuberculosis SP13

text: Homo sapiens

characteristic: strain


text: live

characteristic: INSDC status

text: Pathogen.ba-cl

text: Russia: Saint Petersburg

text: tuberculosis

text: sputum

text: Mycobacterium tuberculosis SP15

text: Homo sapiens


characteristic: INSDC secondary accession

text: live

text: Pathogen.ba-cl

characteristic: collected-by

text: Russia: Saint Petersburg

text: tuberculosis

text: sputum

text: Mycobacterium tuberculosis SP16

text: Homo sapiens


text: live

text: Pathogen.ba-cl

characteristic: collection date

text: Russia: Saint Petersburg

characteristic: geo loc name

text: tuberculosis

text: sputum

text: Mycobacterium tuberculosis SP17

text: Homo sapiens


text: live

text: Pathogen.ba-cl

text: Russia: Saint Petersburg

text: tuberculosis

characteristic: host-disease

text: sputum

characteristic: isolation-source

text: Mycobacterium tuberculosis SP18

text: Homo sapiens


characteristic: External Id

text: live

text: Pathogen.ba-cl

text: Russia: Saint Petersburg

text: tuberculosis

text: sputum

text: Mycobacterium tuberculosis SP21

text: Homo sapiens

characteristic: specific host


text: live

text: Pathogen.ba-cl

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Russia: Saint Petersburg

text: tuberculosis

text: sputum

text: Mycobacterium tuberculosis SP22

text: Homo sapiens


characteristic: INSDC center name

text: live

text: Pathogen.ba-cl

characteristic: SRA accession

text: Russia: Saint Petersburg

text: tuberculosis

text: sputum

text: Mycobacterium tuberculosis SP24

text: Homo sapiens


characteristic: INSDC first public

text: live

text: Pathogen.ba-cl

text: Russia: Saint Petersburg

text: tuberculosis

text: sputum

text: Mycobacterium tuberculosis SP25

characteristic: organism

text: Homo sapiens


characteristic: INSDC last update

text: live

text: Pathogen.ba-cl

text: Russia: Saint Petersburg

text: tuberculosis

text: sputum

text: Mycobacterium tuberculosis SP28

text: Homo sapiens

characteristic: title


text: live

characteristic: INSDC status

text: Pathogen.ba-cl

text: Russia: Saint Petersburg

text: tuberculosis

text: sputum

text: Mycobacterium tuberculosis SP29

text: Homo sapiens

characteristic: strain


characteristic: INSDC secondary accession

text: live

text: Pathogen.ba-cl

characteristic: collected-by

text: Russia: Saint Petersburg

text: tuberculosis

text: sputum

text: Mycobacterium tuberculosis SP31

text: Homo sapiens


text: live

text: Pathogen.ba-cl

characteristic: collection date

text: Russia: Saint Petersburg

characteristic: geo loc name

text: tuberculosis

text: sputum

text: Mycobacterium tuberculosis SP32

text: Homo sapiens


text: live

text: Pathogen.ba-cl

text: Russia: Saint Petersburg

text: tuberculosis

characteristic: host-disease

text: sputum

characteristic: isolation-source

text: Mycobacterium tuberculosis SP33

text: Homo sapiens


characteristic: External Id

text: live

text: Pathogen.ba-cl

text: Russia: Saint Petersburg

text: tuberculosis

text: sputum

text: Mycobacterium tuberculosis SP34

text: Homo sapiens

characteristic: specific host


text: live

text: Pathogen.ba-cl

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Russia: Saint Petersburg

text: tuberculosis

text: sputum

text: Mycobacterium tuberculosis SP35

text: Homo sapiens


characteristic: INSDC center name

text: live

text: Pathogen.ba-cl

characteristic: SRA accession

text: Russia: Saint Petersburg

text: tuberculosis

text: sputum

text: Mycobacterium tuberculosis SP36

text: Homo sapiens


characteristic: INSDC first public

text: live

text: Pathogen.ba-cl

text: Russia: Saint Petersburg

text: tuberculosis

text: sputum

text: Mycobacterium tuberculosis SP37

characteristic: organism

text: Homo sapiens


characteristic: INSDC last update

text: live

text: Pathogen.ba-cl

text: Russia: Saint Petersburg

text: tuberculosis

text: sputum

text: Mycobacterium tuberculosis SP38

text: Homo sapiens

characteristic: title


text: live

characteristic: INSDC status

text: Pathogen.ba-cl

text: Russia: Saint Petersburg

text: tuberculosis

text: sputum

text: Mycobacterium tuberculosis SP39

text: Homo sapiens

characteristic: strain


characteristic: INSDC secondary accession

text: live

text: Pathogen.ba-cl

text: Scientific and Clinical Antituberculosis Center of Moscow Government Health Department, Moscow, Russia

characteristic: collected-by

text: Russia: Moscow

text: tuberculosis

text: sputum

text: Mycobacterium tuberculosis MOS2

text: Homo sapiens


text: live

text: Pathogen.ba-cl

characteristic: collection date

text: Russia: Moscow

characteristic: geo loc name

text: tuberculosis

text: sputum

text: Mycobacterium tuberculosis MOS7

text: Homo sapiens


text: live

text: Pathogen.ba-cl

text: Russia: Moscow

text: tuberculosis

characteristic: host-disease

text: sputum

characteristic: isolation-source

text: Mycobacterium tuberculosis MOS9

text: Homo sapiens


characteristic: External Id

text: live

text: Pathogen.ba-cl

text: Russia: Moscow

text: tuberculosis

text: sputum

text: Mycobacterium tuberculosis MOS10

text: Homo sapiens

characteristic: specific host


text: live

text: Pathogen.ba-cl

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Russia: Moscow

text: tuberculosis

text: sputum

text: Mycobacterium tuberculosis MOS11

text: Homo sapiens


characteristic: INSDC center name

text: live

text: Pathogen.ba-cl

characteristic: SRA accession

text: Russia: Moscow

text: tuberculosis

text: sputum

text: Mycobacterium tuberculosis MOS12

text: Homo sapiens


characteristic: INSDC first public

text: live

text: Pathogen.ba-cl

text: Russia: Moscow

text: tuberculosis

text: sputum

text: Mycobacterium tuberculosis MOS14

characteristic: organism

text: Homo sapiens


characteristic: INSDC last update

text: live

text: Generic

text: Danio rerio

text: zebrafish larvae maintained at control conditiion, replicate 1

characteristic: title


text: live

characteristic: INSDC status

text: Generic

text: Danio rerio

text: zebrafish larvae maintained at control condition, replicate 2


characteristic: INSDC secondary accession

text: live

text: Generic

text: Danio rerio

text: zebrafish larvae maintained at control condition, replicate 3


text: live

text: Generic

text: Danio rerio

text: zebrafish larvae exposed to cold stress, replicate 1


text: live

text: Generic

text: Danio rerio

text: zebrafish larvae exposed to cold stress, replicate 2


text: live

text: Generic

text: Danio rerio

text: zebrafish larvae exposed to cold stress, replicate 3


text: live

text: Generic

text: Danio rerio

text: zebrafish larvae exposed to hypoxia stress, replicate 1


text: live

text: Generic

text: Danio rerio

text: zebrafish larvae exposed to hypoxia stress, replicate 2


text: live

text: Generic

text: Danio rerio

text: zebrafish larvae exposed to hypoxia stress, replicate 3


text: live

text: Generic

text: Originally submitted as Chlamydia psittaci 10_1398_11 but changed in October 2018 because of ANI results to Chlamydia ibidis

characteristic: note

text: Chlamydia ibidis

characteristic: strain

text: Chlamydia psittaci 10_1398_11


text: live

text: Generic

text: Chlamydia psittaci 10_881_SC42

text: Chlamydia psittaci 10_881_SC42


text: Epigenetics, Genetics, Universitat de Barcelona

text: live

text: Generic

text: anti-Abrupt (a polyclonal rabbit antibody from Steven Crews)

characteristic: antibody

text: Drosophila melanogaster

text: Eye/antennal imaginal discs [ChIP]

text: UAS-ab55 (Cook et al. 2004)

text: Eye/antennal imaginal discs

characteristic: tissue

text: Abrupt


text: live

text: Generic

text: Drosophila melanogaster

text: Eye/antennal imaginal discs, scrib mutant [ChIP]

text: FRT82B,scrib1 (Bilder and Perrimon 2000)

text: Eye/antennal imaginal discs


text: live

text: Generic

text: none (input)

text: Drosophila melanogaster

text: Eye/antennal imaginal discs [input]

text: UAS-ab55 (Cook et al. 2004)

text: Eye/antennal imaginal discs


text: live

text: Generic

text: none (input)

text: Drosophila melanogaster

text: Eye/antennal imaginal discs, scrib mutant [input]

text: Eye/antennal imaginal discs


text: Shanghai Jiao Tong University

text: live

text: Generic

text: Saccharomyces cerevisiae

text: budding yeast cells

text: OKZ


text: CBRG

text: live

text: Generic

text: S17S anti-Erf rabbit polyclonal antibody

characteristic: developmental stage

text: Mus musculus

text: Mouse Embryonic Fibroblasts

text: Fibroblasts

text: Starved


characteristic: External Id

text: CBRG

text: live

text: Generic

text: Mus musculus

text: Mouse Embryonic Fibroblasts

text: Fibroblasts

text: Exponential


amnion

text: University of Iowa

text: live

text: Generic

text: amnion from 5 pooled placentas with term (≥ 37 weeks of gestation) deliveries with spontaneous onset of labor

characteristic: description

text: fetal

characteristic: dev-stage

text: Homo sapiens

text: pooled

characteristic: sample-type

text: amnion

characteristic: subtype

text: placenta

characteristic: tissue-type

text: Generic sample from Homo Sapiens


chorion

text: University of Iowa

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: chorion from 5 pooled placentas with term (≥ 37 weeks of gestation) deliveries with spontaneous onset of labor

text: fetal

text: Homo sapiens

text: pooled

text: chorion

text: placenta

text: Generic sample from Homo Sapiens


decidua

text: University of Iowa

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: decidua from 5 pooled placentas with term (≥ 37 weeks of gestation) deliveries with spontaneous onset of labor

text: fetal

text: Homo sapiens

characteristic: organism

text: pooled

text: decidua

text: placenta

text: Generic sample from Homo Sapiens

characteristic: title


text: Bioinformatics, The Babraham Institute

text: live

text: Generic

text: E14 ES

characteristic: cell line

text: Mus musculus

characteristic: passages

text: ES cells

characteristic: strain

text: P0 RNA-Seq


characteristic: External Id

text: Bioinformatics, The Babraham Institute

text: live

text: Generic

text: E14 ES

text: Mus musculus

text: ES cells

text: Serum P12 (1) RNA-Seq


text: Bioinformatics, The Babraham Institute

text: live

text: Generic

text: E14 ES

text: Mus musculus

text: ES cells

text: Serum P12 (2) RNA-Seq


text: Bioinformatics, The Babraham Institute

text: live

text: Generic

text: E14 ES

text: Mus musculus

text: ES cells

text: 2i P12 (1) RNA-Seq


text: Bioinformatics, The Babraham Institute

text: live

text: Generic

text: E14 ES

text: Mus musculus

text: ES cells

text: 2i P12 (2) RNA-Seq


text: Bioinformatics, The Babraham Institute

text: live

text: Generic

text: E14 ES

text: Mus musculus

text: ES cells

text: P0 BS-Seq


text: Bioinformatics, The Babraham Institute

text: live

text: Generic

text: E14 ES

text: Mus musculus

text: ES cells

text: Serum P12 (1) BS-Seq


text: Bioinformatics, The Babraham Institute

text: live

text: Generic

text: E14 ES

text: Mus musculus

text: ES cells

text: Serum P12 (2) BS-Seq


text: Bioinformatics, The Babraham Institute

text: live

text: Generic

text: E14 ES

text: Mus musculus

text: ES cells

text: Serum P12 (3) BS-Seq


text: Bioinformatics, The Babraham Institute

text: live

text: Generic

text: E14 ES

text: Mus musculus

text: ES cells

text: 2i P12 (1) BS-Seq


text: Bioinformatics, The Babraham Institute

text: live

text: Generic

text: E14 ES

text: Mus musculus

text: ES cells

text: 2i P12 (2) BS-Seq


text: Bioinformatics, The Babraham Institute

text: live

text: Generic

text: E14 ES

text: Mus musculus

text: ES cells

text: 2i P12 (3) BS-Seq


text: University of Tartu

text: live

text: Generic

text: Holstein

characteristic: breed

characteristic: collection date

text: Holstein cow from Estonia. Sample from 10th of November, 2010.

characteristic: description

text: Estonia

characteristic: geo loc name

text: Bos taurus

text: Bos taurus

characteristic: specific host

text: General Sample for Bos taurus


Lygus hesperus

text: USDA-ARS ALARC

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission model

text: day 0-5 adults

characteristic: age

text: whole body

characteristic: body site

text: mixed sex adults

characteristic: isolate

text: Lygus hesperus

text: pooled male and female

characteristic: sex

text: Lygus hesperus whole body mixed sex adult


text: Hasan Khatib, Animal Sciences, University of Wisconsin - Madison

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: genotype/variation

text: Bos taurus

characteristic: organism

text: IVF embryos, CDKN1C knockdown

text: IVF embryos

characteristic: tissue

characteristic: title


characteristic: External Id

text: live

text: Generic

text: Sham-injected

text: Bos taurus

text: IVF embryos, Control

text: IVF embryos

text: Sham-injected


text: USDA-ARS

characteristic: INSDC center name

text: live

text: Generic

text: Genomic DNA library was sheared and sequenced using Ion Torrent Personal Genome Machine.

characteristic: description

text: Aeromonas veronii

characteristic: strain

text: Avirulent 2010 West Alabama isolate Aeromonas veronii AL-10-089


text: USDA-ARS

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission model

text: Aeromonas hydrophila

text: Virulent 2010 West Alabama isolate Aeromonas hydrophila ML-10-51K


Holstein bull

text: University of Tartu

text: live

text: Generic

text: Holstein

characteristic: breed

characteristic: collection date

text: Holstein bull WGS 60x coverage

text: Estonia

characteristic: geo loc name

text: blood

characteristic: isolation-source

text: bull

characteristic: label

text: Bos taurus

text: bull

text: Bos taurus

characteristic: specific host

text: General Sample for Bos taurus


Gossypium hirsutum fiber

text: National Botanical Research Institute

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Gossypium hirsutum

text: Expressional Reprogramming during Fiber Development in Contrasting genotypes of Gossypium hirsutum


characteristic: External Id

text: vanderijn-west Lab, Department of Pathology, Stanford University

text: live

text: Generic

text: Homo sapiens

characteristic: organism

text: UNCLEAR

characteristic: prognosis

text: DTF

text: DTF(3SEQ) signature

characteristic: stromal signature

text: Soft Tissue

characteristic: tissue

text: FFPE

characteristic: tissue archive method

text: desmoid type fibromatosis (STT5629_DTF)

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission model

text: Homo sapiens

text: UNCLEAR

text: DTF

text: DTF(3SEQ) signature

text: Soft Tissue

text: FFPE

text: desmoid type fibromatosis (STT5634_DTF)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: DTF

text: DTF(3SEQ) signature

text: Soft Tissue

text: FFPE

text: desmoid type fibromatosis (STT5764_DTF)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: DTF

text: DTF(3SEQ) signature

text: Soft Tissue

text: FFPE

text: desmoid type fibromatosis (STT5766_DTF)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: DTF

text: DTF(3SEQ) signature

text: Soft Tissue

text: FFPE

text: desmoid type fibromatosis (STT5768_DTF)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: DTF

text: DTF(3SEQ) signature

text: Soft Tissue

text: FFPE

text: desmoid type fibromatosis (STT5779_DTF)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: DTF

text: DTF(3SEQ) signature

text: Soft Tissue

text: FFPE

text: desmoid type fibromatosis (STT5646_DTF)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: SFT

text: SFT signature

text: Soft Tissue

text: FFPE

text: solitary fibrous tumor (STT2162_SFT)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: SFT

text: SFT signature

text: Soft Tissue

text: FFPE

text: solitary fibrous tumor (STT3524_SFT)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: SFT

text: SFT signature

text: Soft Tissue

text: FFPE

text: solitary fibrous tumor (STT4711_SFT)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: SFT

text: SFT signature

text: Soft Tissue

text: FFPE

text: solitary fibrous tumor (STT5388_SFT)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: SFT

text: SFT signature

text: Soft Tissue

text: FFPE

text: solitary fibrous tumor (STT6077_SFT)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: DFSP

text: DFSP signature

text: Soft Tissue

text: FFPE

text: dermatofibrosarcoma protuberans (STT5638_DFSP)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: DFSP

text: DFSP signature

text: Soft Tissue

text: FFPE

text: dermatofibrosarcoma protuberans (STT5647_DFSP)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: DFSP

text: DFSP signature

text: Soft Tissue

text: FFPE

text: dermatofibrosarcoma protuberans (STT6081_DFSP)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: DFSP

text: DFSP signature

text: Soft Tissue

text: FFPE

text: dermatofibrosarcoma protuberans (STT6082_DFSP)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: FC

text: FC signature

text: Soft Tissue

text: FFPE

text: collagenous fibroma (STT5772_FC)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: FC

text: FC signature

text: Soft Tissue

text: FFPE

text: collagenous fibroma (STT5993_FC)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: FC

text: FC signature

text: Soft Tissue

text: FFPE

text: collagenous fibroma (STT6070_FC)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: FC

text: FC signature

text: Soft Tissue

text: FFPE

text: collagenous fibroma (STT6071_FC)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: FC

text: FC signature

text: Soft Tissue

text: FFPE

text: collagenous fibroma (STT6073_FC)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: FC

text: FC signature

text: Soft Tissue

text: FFPE

text: collagenous fibroma (STT5994_FC)


text: live

text: Generic

text: Homo sapiens

text: GOOD

text: EF

text: EF signature

text: Soft Tissue

text: FFPE

text: elastofibroma (STT5999_EF)


text: live

text: Generic

text: Homo sapiens

text: GOOD

text: EF

text: EF signature

text: Soft Tissue

text: FFPE

text: elastofibroma (STT6000_EF)


text: live

text: Generic

text: Homo sapiens

text: GOOD

text: EF

text: EF signature

text: Soft Tissue

text: FFPE

text: elastofibroma (STT6051_EF)


text: live

text: Generic

text: Homo sapiens

text: GOOD

text: EF

text: EF signature

text: Soft Tissue

text: FFPE

text: elastofibroma (STT6052_EF)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: IF

text: IF signature

text: Soft Tissue

text: FFPE

text: infantile digital fibromatosis (STT5644_IF)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: IF

text: IF signature

text: Soft Tissue

text: FFPE

text: infantile digital fibromatosis (STT5652_IF)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: IF

text: IF signature

text: Soft Tissue

text: FFPE

text: infantile digital fibromatosis (STT5777_IF)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: PF

text: PF signature

text: Soft Tissue

text: FFPE

text: palmar fibromatosis (STT5642_PF)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: PF

text: PF signature

text: Soft Tissue

text: FFPE

text: palmar fibromatosis (STT5643_PF)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: PF

text: PF signature

text: Soft Tissue

text: FFPE

text: palmar fibromatosis (STT5650_PF)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: PF

text: PF signature

text: Soft Tissue

text: FFPE

text: palmar fibromatosis (STT5773_PF)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: PF

text: PF signature

text: Soft Tissue

text: FFPE

text: palmar fibromatosis (STT5781_PF)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: PF

text: PF signature

text: Soft Tissue

text: FFPE

text: palmar fibromatosis (STT6056_PF)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: PF

text: PF signature

text: Soft Tissue

text: FFPE

text: palmar fibromatosis (STT6057_PF)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: PF

text: PF signature

text: Soft Tissue

text: FFPE

text: palmar fibromatosis (STT6058_PF)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: NPAF

text: NPAF signature

text: Soft Tissue

text: FFPE

text: nasopharyngeal angiofibroma (STT5786_NPAF)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: NPAF

text: NPAF signature

text: Soft Tissue

text: FFPE

text: nasopharyngeal angiofibroma (STT5787_NPAF)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: NPAF

text: NPAF signature

text: Soft Tissue

text: FFPE

text: nasopharyngeal angiofibroma (STT5788_NPAF)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: NPAF

text: NPAF signature

text: Soft Tissue

text: FFPE

text: nasopharyngeal angiofibroma (STT5792_NPAF)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: NPAF

text: NPAF signature

text: Soft Tissue

text: FFPE

text: nasopharyngeal angiofibroma (STT5793_NPAF)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: NPAF

text: NPAF signature

text: Soft Tissue

text: FFPE

text: nasopharyngeal angiofibroma (STT5806_NPAF)


text: live

text: Generic

text: Homo sapiens

text: BAD

text: FOTS

text: FOTS signature

text: Soft Tissue

text: FFPE

text: fibroma of tendon sheath (STT5782_FOTS)


text: live

text: Generic

text: Homo sapiens

text: BAD

text: FOTS

text: FOTS signature

text: Soft Tissue

text: FFPE

text: fibroma of tendon sheath (STT5784_FOTS)


text: live

text: Generic

text: Homo sapiens

text: BAD

text: FOTS

text: FOTS signature

text: Soft Tissue

text: FFPE

text: fibroma of tendon sheath (STT6065_FOTS)


text: live

text: Generic

text: Homo sapiens

text: BAD

text: FOTS

text: FOTS signature

text: Soft Tissue

text: FFPE

text: fibroma of tendon sheath (STT6068_FOTS)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: NF

text: NF signature

text: Soft Tissue

text: FFPE

text: nodular fasciitis (STT5636_NF)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: NF

text: NF signature

text: Soft Tissue

text: FFPE

text: nodular fasciitis (STT6059_NF)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: NF

text: NF signature

text: Soft Tissue

text: FFPE

text: nodular fasciitis (STT6060_NF)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: NF

text: NF signature

text: Soft Tissue

text: FFPE

text: nodular fasciitis (STT6061_NF)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: NF

text: NF signature

text: Soft Tissue

text: FFPE

text: nodular fasciitis (STT6063_NF)


text: live

text: Generic

text: Homo sapiens

text: UNCLEAR

text: NF

text: NF signature

text: Soft Tissue

text: FFPE

text: nodular fasciitis (STT6062_NF)


name: P. borchgrevinki Reference Transcriptome

text: University of Illinois, Urbana Champaign

text: live

text: Generic

text: 454 pyrosequenced transcriptome of mixed RNA from several tissues collected from the Antarctic nototheniid P. borchgrevinki. These included fish from their natural cold waters and heat stressed specimens, both chronic and acute.

characteristic: description

text: reference transcriptome

characteristic: label

text: Pagothenia borchgrevinki

text: General Sample for Pagothenia borchgrevinki


CD4+CD25+ T-cells, Medip-seq

text: Osaka University, WPI Immunology Frontier Research Center

characteristic: INSDC last update

text: live

text: Generic

text: Mus musculus

text: Generic sample from Mus musculus


CD4+CD25-CD44low T-cells, Medip-seq

text: live

text: Generic

text: Mus musculus

text: Generic sample from Mus musculus


text: University of Tennessee

characteristic: INSDC secondary accession

text: live

text: Generic

text: tongue

characteristic: body site

characteristic: collection date

text: wild winter alligator tongue

text: USA: Rockefeller Wildlife Refuge, Louisiana

characteristic: geo loc name

text: Alligator mississippiensis

text: wild

characteristic: rearing history

text: female

characteristic: sex

text: Generic sample from Alligator mississippiensis


amur ide

characteristic: External Id

text: CAFS

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: adult

characteristic: age

text: The samples were collected from Dali Nor Lake, Inner Mongolia, China. RNA was extracted from 12 types of tissue using Trizol method.

text: Alkaline

characteristic: ecotype

text: China : Dali Nur Lake

text: Leuciscus waleckii

characteristic: organism

text: pool of brain, muscle, liver, intestine, blood, head kidney, trunk kidney, skin, gill, spleen, gonad and heart

text: Solexa sequencing data for amur ide cDNA


RESFISH-SAMPLES

text: Catalan Institute for Water Research (ICRA)

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission model

text: Bacteria

text: Microbial community diversity associated with the intestinal mucosa of wild fish species

characteristic: title


text: Chromatin dynamics, Nuclear Dynamics and Genome Plasticity, Institut Curie

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: HeLa S3

characteristic: cell line

text: Cervical cancer

characteristic: cell type

text: wild type

characteristic: genotype/variation

text: Homo sapiens

text: WT MNase input

text: WT MNase input (replicate 1)


text: live

text: Generic

text: HeLa S3

text: Cervical cancer

text: wild type

text: Homo sapiens

text: WT MNase input

text: WT MNase input (replicate 2)


text: live

text: Generic

text: HeLa S3

text: Cervical cancer

text: CENP-A (Enzo life science, ADI-KAM-CC006-E)

characteristic: chip antibody

text: wild type

text: Homo sapiens

text: WT CenH3 ChIP

text: WT CenH3 ChIP-seq (replicate 1)


characteristic: External Id

text: live

text: Generic

text: HeLa S3

text: Cervical cancer

text: wild type

text: Homo sapiens

text: WT CenH3 ChIP

text: WT CenH3 ChIP-seq (replicate 2)


text: live

characteristic: INSDC status

text: Generic

text: eCenH3 HeLa S3

text: Cervical cancer

text: CenH3 over-expression

text: Homo sapiens

text: eCenH3 MNase input

text: eCenH3 MNase input (replicate 1)


text: live

text: Generic

characteristic: NCBI submission package

text: eCenH3 HeLa S3

text: Cervical cancer

text: CenH3 over-expression

text: Homo sapiens

text: eCenH3 MNase input

text: eCenH3 MNase input (replicate 2)


text: live

text: Generic

characteristic: SRA accession

text: eCenH3 HeLa S3

text: Cervical cancer

text: Flag M2 Agarose beads (Sigma Aldrich)

text: CenH3 over-expression

text: Homo sapiens

text: eCenH3 ChIP

text: eCenH3 ChIP-seq (replicate 1)


text: live

text: Generic

text: eCenH3 HeLa S3

text: Cervical cancer

text: Flag M2 Agarose beads (Sigma Aldrich)

text: CenH3 over-expression

text: Homo sapiens

text: eCenH3 ChIP

text: eCenH3 ChIP-seq (replicate 2)


text: Comai Lab, Genome Center, UC Davis

text: live

text: Generic

text: ColA9 X Col-0

text: Arabidopsis thaliana

text: Arabidopsis seeds

text: 3 days after pollination

characteristic: time

text: whole seeds

characteristic: tissue

text: Control: Seed from ColA9 X Col-0 rep1


text: Comai Lab, Genome Center, UC Davis

text: live

text: Generic

text: ColA9 X Col-0

characteristic: ecotype

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis seeds

text: 3 days after pollination

text: whole seeds

text: Control: Seed from ColA9 X Col-0 rep2


text: Comai Lab, Genome Center, UC Davis

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: C24A9 X C24

text: Arabidopsis thaliana

text: Arabidopsis seeds

text: 3 days after pollination

text: whole seeds

text: Control: Seed from C24A9 X C24 rep1


text: Comai Lab, Genome Center, UC Davis

text: live

text: Generic

characteristic: NCBI submission model

text: C24A9 X C24

text: Arabidopsis thaliana

text: Arabidopsis seeds

text: 3 days after pollination

text: whole seeds

text: Control: Seed from C24A9 X C24 rep2

characteristic: title


text: Comai Lab, Genome Center, UC Davis

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: ColA9 X Col-0

text: Arabidopsis thaliana

text: Arabidopsis seeds

text: 3 days after pollination

text: whole seeds

text: Control: Seed from ColA9 X Col-0 rep1 single


text: Comai Lab, Genome Center, UC Davis

text: live

text: Generic

text: ColA9 X Col-0

text: Arabidopsis thaliana

text: Arabidopsis seeds

text: 3 days after pollination

text: whole seeds

text: Control: Seed from ColA9 X Col-0 rep2 single


text: Comai Lab, Genome Center, UC Davis

text: live

text: Generic

text: C24A9 X C24

text: Arabidopsis thaliana

text: Arabidopsis seeds

text: 3 days after pollination

text: whole seeds

text: Control: Seed from C24A9 X C24 rep1 single


text: Comai Lab, Genome Center, UC Davis

text: live

text: Generic

text: C24A9 X C24

text: Arabidopsis thaliana

text: Arabidopsis seeds

text: 3 days after pollination

text: whole seeds

text: Control: Seed from C24A9 X C24 rep2 single


text: Comai Lab, Genome Center, UC Davis

text: live

text: Generic

text: Col-0 X A. arenosa

text: Arabidopsis thaliana x Arabidopsis arenosa

text: Arabidopsis seeds

text: 3 days after pollination

text: whole seeds

text: Hybrid: A. thaliana eco. Col-0 X A. arenosa rep1


text: Comai Lab, Genome Center, UC Davis

text: live

text: Generic

text: Col-0 X A. arenosa

text: Arabidopsis seeds

text: 3 days after pollination

text: whole seeds

text: Hybrid: A. thaliana eco. Col-0 X A. arenosa rep2


text: Comai Lab, Genome Center, UC Davis

text: live

text: Generic

text: C24 X A. arenosa

text: Arabidopsis seeds

text: 3 days after pollination

text: whole seeds

text: Hybrid: A. thaliana eco. C24 X A. arenosa rep1


text: Comai Lab, Genome Center, UC Davis

text: live

text: Generic

text: C24 X A. arenosa

text: Arabidopsis seeds

text: 3 days after pollination

text: whole seeds

text: Hybrid: A. thaliana eco. C24 X A. arenosa rep2


text: Broad Institute

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: Corynebacterium pyruviciproducens 17730

characteristic: sample name

characteristic: strain

text: Generic sample from Corynebacterium pyruviciproducens ATCC BAA-1742


characteristic: External Id

characteristic: GEO Accession

text: Gene Expression Omnibus

text: live

text: Generic

text: Anti-c-Myc; Sigma, Cat#: A7470-1ML (Agarose Affinity Gel)

characteristic: antibody

characteristic: cell line

text: source: HEK293T_Myc_Idax_ChIP-seq

characteristic: description

text: Homo sapiens

text: GSM1054009: Myc_Idax_ChIP-seq

text: wild-type Myc-Idax

characteristic: transfection


text: Gene Expression Omnibus

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: source: HEK293T_Myc_IdaxDBM_ChIP-seq

text: Homo sapiens

text: GSM1054010: Myc_IdaxDBM_ChIP-seq

text: DNA-binding mutant of Myc-Idax (Myc-IdaxDBM)


text: Gene Expression Omnibus

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: source: HEK293T_Empty_ChIP-seq

text: Homo sapiens

characteristic: organism

text: GSM1054011: Empty_ChIP-seq

text: empty vector


text: Gene Expression Omnibus

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission model

text: source: primary cultured lymphocytes

text: Homo sapiens

text: PBMC

characteristic: tissue

text: GSM1054021: FRDA05-UT

characteristic: title

text: Un-treated control

characteristic: treatment


characteristic: External Id

text: Gene Expression Omnibus

characteristic: INSDC secondary accession

text: live

text: Generic

text: source: primary cultured lymphocytes

text: Homo sapiens

text: PBMC

text: GSM1054022: FRDA05-Nico

text: 10mM nicotinamide


characteristic: GEO Accession

text: Gene Expression Omnibus

text: live

text: Generic

text: source: primary cultured lymphocytes

text: Homo sapiens

text: PBMC

text: GSM1054023: FRDA015-UT

text: Un-treated control


text: Gene Expression Omnibus

text: live

text: Generic

text: source: primary cultured lymphocytes

text: Homo sapiens

text: PBMC

text: GSM1054024: FRDA015-Nico

text: 10mM nicotinamide


text: MRC Clinical Sciences Centre

text: live

text: Generic

characteristic: biomaterial provider

characteristic: cell line

text: Healthy individual

characteristic: group

text: Homo sapiens

text: EBV lymphoblastoid cell line

text: PBMC


text: MRC Clinical Sciences Centre

text: live

characteristic: INSDC status

text: Generic

text: FRDA affected individual

text: Homo sapiens

text: EBV lymphoblastoid cell line

text: PBMC


Virus-inoculated honey bee pupae

text: USGS

text: live

text: Generic

characteristic: NCBI submission package

text: Fifteen pupae collected from the research apiary at the USDA Beltsville Bee Research Lab. The pupae had been inoculated with an extract enriched in honey bee RNA viruses, performed by Dr. Humberto F. Boncristiani.

characteristic: description

text: Apis mellifera

text: Honey bee pupae inoculated with an extract containing RNA viruses


VSV dsBgal control

text: University of Pennsylvania

characteristic: INSDC center name

text: live

text: Generic

text: Bgal dsRNA

characteristic: dsrna treatment

text: Drosophila melanogaster

text: Generic sample from Drosophila melanogaster

text: Vesicular Stomatitis Virus

characteristic: virus infection


VSV dsDcr-2

text: University of Pennsylvania

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Dicer-2 dsRNA

text: Drosophila melanogaster

characteristic: organism

text: Vesicular Stomatitis Virus


VSV dsDcr-1

text: University of Pennsylvania

text: live

text: Generic

characteristic: NCBI submission model

text: Dicer-1 dsRNA

text: Drosophila melanogaster

characteristic: title

text: Vesicular Stomatitis Virus


VSV dsDrosha

characteristic: External Id

text: University of Pennsylvania

text: live

text: Generic

text: Drosha dsRNA

text: Drosophila melanogaster

text: Vesicular Stomatitis Virus


VSV dsAgo2

text: University of Pennsylvania

text: live

text: Generic

text: Argonaute 2 dsRNA

text: Drosophila melanogaster

text: Vesicular Stomatitis Virus


VSV dsAgo1

text: University of Pennsylvania

text: live

text: Generic

text: Argonaute 1 dsRNA

text: Drosophila melanogaster

text: Vesicular Stomatitis Virus


RVFV dsBgal control

text: University of Pennsylvania

text: live

text: Generic

text: Bgal dsRNA

text: Drosophila melanogaster

text: Rift Valley Fever Virus


RVFV dsDcr-2

text: University of Pennsylvania

text: live

text: Generic

text: Dicer-2 dsRNA

text: Drosophila melanogaster

text: Rift Valley Fever Virus


RVFV dsDcr-1

text: University of Pennsylvania

text: live

text: Generic

text: Dicer-1 dsRNA

text: Drosophila melanogaster

text: Rift Valley Fever Virus


RVFV dsDrosha

text: University of Pennsylvania

text: live

text: Generic

text: Drosha dsRNA

text: Drosophila melanogaster

text: Rift Valley Fever Virus


RVFV dsAgo2

text: University of Pennsylvania

text: live

text: Generic

text: Argonaute 2 dsRNA

text: Drosophila melanogaster

text: Rift Valley Fever Virus


RVFV dsAgo1

text: University of Pennsylvania

text: live

text: Generic

text: Argonaute 1 dsRNA

text: Drosophila melanogaster

text: Rift Valley Fever Virus


DCV dsBgal control

text: University of Pennsylvania

text: live

text: Generic

text: Bgal dsRNA

text: Drosophila melanogaster

text: Drosophila C virus


DCV dsDcr-2

text: University of Pennsylvania

text: live

text: Generic

text: Dicer-2 dsRNA

text: Drosophila melanogaster

text: Drosophila C virus


DCV dsDcr-1

text: University of Pennsylvania

text: live

text: Generic

text: Dicer-1 dsRNA

text: Drosophila melanogaster

text: Drosophila C virus


DCV dsDrosha

text: University of Pennsylvania

text: live

text: Generic

text: Drosha dsRNA

text: Drosophila melanogaster

text: Drosophila C virus


DCV dsAgo2

text: University of Pennsylvania

text: live

text: Generic

text: Argonaute 2 dsRNA

text: Drosophila melanogaster

text: Drosophila C virus


DCV dsAgo1

text: University of Pennsylvania

text: live

text: Generic

text: Argonaute 1 dsRNA

text: Drosophila melanogaster

text: Drosophila C virus


uninfected dsDCV

text: University of Pennsylvania

text: live

text: Generic

text: DCV capsid dsRNA

text: Drosophila melanogaster


VACV dsGFP control

text: University of Pennsylvania

text: live

text: Generic

text: GFP dsRNA

text: Drosophila melanogaster

text: Vaccinia virus


VACV dsDcr-2

text: University of Pennsylvania

text: live

text: Generic

text: Dicer-2 dsRNA

text: Drosophila melanogaster

text: Vaccinia virus


VACV dsDcr-1

text: University of Pennsylvania

text: live

text: Generic

text: Dicer-1 dsRNA

text: Drosophila melanogaster

text: Vaccinia virus


VACV dsDrosha

text: University of Pennsylvania

text: live

text: Generic

text: Drosha dsRNA

text: Drosophila melanogaster

text: Vaccinia virus


VACV dsAgo2

text: University of Pennsylvania

text: live

text: Generic

text: Argonaute 2 dsRNA

text: Drosophila melanogaster

text: Vaccinia virus


VACV dsAgo1

text: University of Pennsylvania

text: live

text: Generic

text: Argonaute 1 dsRNA

text: Drosophila melanogaster

text: Vaccinia virus


text: Gene Research Center, Shinshu University

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: J-type

characteristic: line

text: Petunia x hybrida

text: Petal tissues

text: Before flower buds open

characteristic: stage

text: White petal

characteristic: tissue

text: J-white


text: live

characteristic: INSDC status

text: Generic

text: J-type

text: Petunia x hybrida

text: Petal tissues

text: Before flower buds open

text: Purple petal

text: J-purple


text: live

text: Generic

characteristic: NCBI submission package

text: Red Star

text: Petunia x hybrida

text: Petal tissues

text: Before flower buds open

text: White petal

text: R-white


text: live

text: Generic

text: Red Star

text: Petunia x hybrida

text: Petal tissues

text: Before flower buds open

text: Red petal

text: R-red


text: Plant Biotechnology Institute, National Research Council

text: live

text: Generic

text: Columbia

characteristic: ecotype

text: wild type

characteristic: genotype/variation

text: Arabidopsis thaliana

text: Seedling

text: Col WT seedling treated with rapamycin_rep1

text: 10 µg/ml rapamycin

characteristic: treatment


characteristic: INSDC center name

text: live

text: Generic

text: Columbia

text: wild type

text: Arabidopsis thaliana

text: Seedling

text: Col WT seedling treated with rapamycin_rep2

text: 10 µg/ml rapamycin


characteristic: INSDC first public

text: live

text: Generic

text: Columbia

text: wild type

text: Arabidopsis thaliana

text: Seedling

text: Col WT seedling treated with rapamycin_rep3

text: 10 µg/ml rapamycin


characteristic: INSDC last update

text: live

text: Generic

text: Columbia

text: Arabidopsis thaliana

text: Seedling

text: BP12-2 seedling treated with rapamycin_rep1

text: 10 µg/ml rapamycin


text: live

text: Generic

text: Columbia

text: Arabidopsis thaliana

characteristic: organism

text: Seedling

text: BP12-2 seedling treated with rapamycin_rep2

text: 10 µg/ml rapamycin


text: live

text: Generic

characteristic: NCBI submission model

text: Columbia

text: Arabidopsis thaliana

text: Seedling

text: BP12-2 seedling treated with rapamycin_rep3

text: 10 µg/ml rapamycin


text: University of Queensland

text: live

text: Pathogen.cl

text: Medical Professional

characteristic: collected by

characteristic: collection date

text: Australia: Sydney

characteristic: geo loc name

text: Sepsis

characteristic: host disease

text: Infected hip

characteristic: isolation source

text: 33.8683 S 151.2086 E

characteristic: lat lon

text: Klebsiella pneumoniae

text: Homo sapiens

characteristic: specific host

text: Pathogen bacterial, clinical or host-associated sample from Klebsiella pneumoniae

characteristic: title


characteristic: External Id

text: University of Queensland

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission package

characteristic: SRA accession

text: Medical Professional

text: Australia: Sydney

text: Intra-Abdominal Infection

text: Infected hip

text: 33.8683 S 151.2086 E

text: Klebsiella pneumoniae

text: Homo sapiens


text: Uppsala University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: initial fertilization development until karyogamy (i.e., presence of croziers)

characteristic: dev-stage

text: Neurospora intermedia

text: cross between FGSC 8782 and FGSC 8882

characteristic: strain

text: sexual reproductive tissue including surrounding vegetative mycelia

characteristic: tissue-type


text: Uppsala University

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission model

text: 3 days old

text: Neurospora intermedia

characteristic: organism

text: cross between FGSC 8782 and FGSC 8882

text: vegetative tissue


BarleyLeafControl

text: Baker IDI Heart and DIabetes Institute

text: live

text: Generic

text: 14 days

characteristic: age

characteristic: collection date

text: Hordeum vulgare

text: Healthy

characteristic: phenotype

text: Untreated

characteristic: sample-type

text: Hindmarsh

text: Leaf

text: BarleyLeafControl


BarleyLeafSalt

characteristic: External Id

text: Baker IDI Heart and DIabetes Institute

text: live

text: Generic

text: 14 days

text: Hordeum vulgare

text: Healthy

text: Hindmarsh

text: Leaf

text: BarleyLeafSalt

characteristic: title


text: Institute of Molecular and Cell Biology, Biopolis, A*STAR, Singapore

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Ginglymostoma cirratum

text: Spleen

text: Generic sample from Ginglymostoma cirratum


text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Ginglymostoma cirratum

text: Thymus


SEPTANTE

text: Institut des Sciences du vegetal

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIMARKS.survey

text: grassland

characteristic: biome

characteristic: depth

text: The soil used for this study was collected in September 2009 from a grassland (latitude N 48° 42' 22.7'', longitude E 2° 7' 35.4'') in the Merantaise valley (Gif sur Yvette, France) and stored at 4°C.

characteristic: description

characteristic: elev

characteristic: env package

text: river valley

characteristic: feature

text: France: Gif sur Yvette

characteristic: geo loc name

text: miens-survey

characteristic: investigation type

text: SEPTANTE

characteristic: label

text: 48.706298 N 2.126495 E

characteristic: lat lon

text: soil

characteristic: material

text: soil metagenome

text: Analysis of the effect of octopine bias on bacterial diversity

characteristic: project name

text: Survey related sample for Merantaise's soil


characteristic: External Id

text: Baker IDI Heart and Diabetes Institute

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Hordeum vulgare L. cv. Hindmarsh seedling were grown in trays filled with potting mix consisting of vermiculite:perlite (2:1), in a cabinet set at 12 h of light per day, 72% humidity and 20*C temperature for 14 days. Plants were treated for 12 hrs with acute salt (150 mM NaCl), or remained unstressed for control plants. Leaves were harvested, snap-frozen in liquid nitrogen and stored at -80*C. RNA extraction performed with Trizol method. ,RNA-Seq Libraries were produced as per the Illumina mRNA-Seq library preparation protocol (September 2009, CA, USA).

text: Hordeum vulgare

characteristic: organism

text: Barley leaf control sample

characteristic: title


text: Baker IDI Heart and Diabetes Institute

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Hordeum vulgare L. cv. Hindmarsh seedling were grown in trays filled with potting mix consisting of vermiculite:perlite (2:1), in a cabinet set at 12 h of light per day, 72% humidity and 20*C temperature for 14 days. Plants were treated for 12 hrs with acute salt (150 mM NaCl), or remained unstressed for control plants. Leaves were harvested, snap-frozen in liquid nitrogen and stored at -80*C. RNA extraction performed with Trizol method. RNA-Seq Libraries were produced as per the Illumina mRNA-Seq library preparation protocol (September 2009, CA, USA).

characteristic: description

text: Hordeum vulgare

text: Barley leaf control sample


text: University of Newcastle

text: live

text: Generic

text: wildtype

characteristic: genotype

text: Acinetobacter baylyi ADP1

text: wild-type cells

characteristic: strain


text: University of Newcastle

text: live

text: Generic

text: atfA knockout

text: Acinetobacter baylyi ADP1

text: atfA knockout


name: C. elegans N2 wildtype EtOH control sample

text: University of Eastern Finland

text: live

text: Generic

text: C. elegans N2 wildtype was obtained from the Caenorhabditis Genetics Center (St. Paul, Minnesota, U.S.A.) and maintained on nematode growth media (NGM) with OP50 bacteria as a food source. Gravid adults were bleached in potassium hypochlorite, washed 4X in M9 buffer, and embryos were placed directly onto freshly prepared NGM plates seeded with OP50. Animals were allowed to grow at room temperature (20-22 C) until reaching L4 stage just before adulthood (~2-2.5d). Animals were collected at L4 stage, washed 4X with water and placed immediately into Trizol solution (Gibco-BRL, Gaithersberg, MD). Total RNA was isolated according to the manufacturer’s protocol, and residual DNA was removed with TurboDNA free (Ambion, Austin, Texas). Total RNA was quantitated on a Nanodrop device and sequenced using Illumina library sample kit (Illumina, San Diego, CA) on a GA IIx instrument, using single read 38 bp mode.

text: Caenorhabditis elegans


C. elegans N2 wildtype treated sample

text: University of Eastern Finland

text: live

text: Generic

text: C. elegans N2 wildtype was obtained from the Caenorhabditis Genetics Center (St. Paul, Minnesota, U.S.A.) and maintained on nematode growth media (NGM) with OP50 bacteria as a food source. Gravid adults were bleached in potassium hypochlorite, washed 4X in M9 buffer, and embryos were placed directly onto freshly prepared NGM plates seeded with OP50 and ethanol at a final agar concentration of 0.2M. Animals were allowed to grow at room temperature (20-22 C) until reaching L4 stage just before adulthood (~2-2.5d) Animals were collected at L4 stage, washed 4X with water and placed immediately into Trizol solution (Gibco-BRL, Gaithersberg, MD). Total RNA was isolated according to the manufacturer’s protocol, and residual DNA was removed with TurboDNA free (Ambion, Austin, Texas). Total RNA was quantitated on a Nanodrop device and sequenced using Illumina library sample kit (Illumina, San Diego, CA) on a GA IIx instrument, using single read 38 bp mode.

text: Caenorhabditis elegans

text: C. elegans N2 wildtype EtOH treated sample


text: Institute for Nutritional Sciences, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences

text: live

text: Generic

text: adult, 9 weeks

characteristic: developmental stage

text: male

characteristic: gender

text: wild type

text: Mus musculus

text: Normal liver

text: liver

characteristic: tissue

text: Normal liver


characteristic: External Id

text: live

text: Generic

text: adult, 9 weeks

text: male

text: db/db

text: Mus musculus

text: Diabetic liver

text: liver

text: Diabetic liver


Human blood virome

text: CNRS/UMR 7278

characteristic: INSDC last update

text: live

text: Generic

text: Human blood viral metagenome obtained by combined 0.45 *m filtering and CsCl ultracentrifugation.

text: Homo sapiens

text: Human blood viral metagenome


ATCC 53103 reference strain

text: VU University

characteristic: INSDC secondary accession

text: live

text: Generic

text: BCCM/LMG culture collection LMG 18243

text: TNO 2012.097

characteristic: isolate

text: Lacticaseibacillus rhamnosus GG

text: LGG

text: Generic sample from Lactobacillus rhamnosus


product isolate 1

text: VU University

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: BCCM/LMG culture collection LMG 25859

text: TNO 2012.098

text: yoba 2010

characteristic: label

text: Lacticaseibacillus rhamnosus LMG 25859

text: LGG


product isolate 2A

text: VU University

characteristic: INSDC center name

text: live

text: Generic

text: TNO 2010.113

text: Lacticaseibacillus rhamnosus GG

characteristic: organism

text: LGG

characteristic: title


product isolate 3

text: VU University

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: TNO 2012.094

text: yoba 2012

text: Lacticaseibacillus rhamnosus LMG 27229

text: LGG


text: cankiri karatekin university

text: live

text: Generic

text: Ayvalik

characteristic: cultivar

text: Olea europaea

text: olive

text: fruits

text: unripe

characteristic: tissue status

text: UF


text: cankiri karatekin university

text: live

text: Generic

text: Ayvalik

text: Olea europaea

text: olive

text: fruits

text: ripe

text: RF


text: cankiri karatekin university

text: live

text: Generic

text: Ayvalik

text: Olea europaea

text: olive

text: leaves

text: juvenile

text: JON

text: on-year

characteristic: year


text: cankiri karatekin university

text: live

text: Generic

text: Ayvalik

text: Olea europaea

text: olive

text: leaves

characteristic: tissue

text: mature

text: NON

text: on-year


characteristic: External Id

text: cankiri karatekin university

text: live

text: Generic

text: Ayvalik

text: Olea europaea

text: olive

text: leaves

text: juvenile

text: JOFF

text: off-year


text: cankiri karatekin university

characteristic: INSDC last update

text: live

text: Generic

text: Ayvalik

text: Olea europaea

text: olive

text: leaves

text: mature

text: NOFF

text: off-year


characteristic: GEO Accession

text: Gene Expression Omnibus

characteristic: INSDC secondary accession

text: live

text: Generic

text: 7 week

characteristic: age

text: source: FL_Adipose_Wk7

characteristic: description

text: FL cockerel

characteristic: line

text: Gallus gallus

text: Abdominal adipose

text: abdominal adipose

text: GSM1054359: Chicken Abdominal fat, fat line (FL), 7 week of age, biological replicate 1, techical replicate 1


text: Gene Expression Omnibus

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: 7 week

text: source: FL_Adipose_Wk7

text: FL cockerel

text: Gallus gallus

text: Abdominal adipose

text: abdominal adipose

text: GSM1054360: Chicken Abdominal fat, fat line (FL), 7 week of age, biological replicate 1, techical replicate 2


text: Gene Expression Omnibus

characteristic: INSDC first public

text: live

text: Generic

text: 7 week

text: source: FL_Adipose_Wk7

text: FL cockerel

text: Gallus gallus

characteristic: organism

text: Abdominal adipose

text: abdominal adipose

text: GSM1054361: Chicken Abdominal fat, fat line (FL), 7 week of age, biological replicate 1, techical replicate 3

characteristic: title


text: Gene Expression Omnibus

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: 7 week

text: source: FL_Adipose_Wk7

text: FL cockerel

text: Gallus gallus

text: Abdominal adipose

text: abdominal adipose

text: GSM1054362: Chicken Abdominal fat, fat line (FL), 7 week of age, biological replicate 2, techical replicate 1


text: Gene Expression Omnibus

text: live

text: Generic

text: 7 week

text: source: FL_Adipose_Wk7

text: FL cockerel

text: Gallus gallus

text: Abdominal adipose

text: abdominal adipose

text: GSM1054363: Chicken Abdominal fat, fat line (FL), 7 week of age, biological replicate 2, techical replicate 2


text: Gene Expression Omnibus

text: live

text: Generic

text: 7 week

text: source: FL_Adipose_Wk7

text: FL cockerel

text: Gallus gallus

text: Abdominal adipose

text: abdominal adipose

text: GSM1054364: Chicken Abdominal fat, fat line (FL), 7 week of age, biological replicate 2, techical replicate 3


text: Gene Expression Omnibus

text: live

text: Generic

text: 7 week

text: source: FL_Adipose_Wk7

text: FL cockerel

text: Gallus gallus

text: Abdominal adipose

text: abdominal adipose

text: GSM1054365: Chicken Abdominal fat, fat line (FL), 7 week of age, biological replicate 3, techical replicate 1


text: Gene Expression Omnibus

text: live

text: Generic

text: 7 week

text: source: FL_Adipose_Wk7

text: FL cockerel

text: Gallus gallus

text: Abdominal adipose

text: abdominal adipose

text: GSM1054366: Chicken Abdominal fat, fat line (FL), 7 week of age, biological replicate 3, techical replicate 2


text: Gene Expression Omnibus

text: live

text: Generic

text: 7 week

text: source: FL_Adipose_Wk7

text: FL cockerel

text: Gallus gallus

text: Abdominal adipose

text: abdominal adipose

text: GSM1054367: Chicken Abdominal fat, fat line (FL), 7 week of age, biological replicate 3, techical replicate 3


text: Gene Expression Omnibus

text: live

text: Generic

text: 7 week

text: source: FL_Adipose_Wk7

text: FL cockerel

text: Gallus gallus

text: Abdominal adipose

text: abdominal adipose

text: GSM1054368: Chicken Abdominal fat, fat line (FL), 7 week of age, biological replicate 4, techical replicate 1


text: Gene Expression Omnibus

text: live

text: Generic

text: 7 week

text: source: FL_Adipose_Wk7

text: FL cockerel

text: Gallus gallus

text: Abdominal adipose

text: abdominal adipose

text: GSM1054369: Chicken Abdominal fat, fat line (FL), 7 week of age, biological replicate 4, techical replicate 2


text: Gene Expression Omnibus

text: live

text: Generic

text: 7 week

text: source: FL_Adipose_Wk7

text: FL cockerel

text: Gallus gallus

text: Abdominal adipose

text: abdominal adipose

text: GSM1054370: Chicken Abdominal fat, fat line (FL), 7 week of age, biological replicate 4, techical replicate 3


text: Gene Expression Omnibus

text: live

text: Generic

text: 7 week

text: source: LL_Adipose_Wk7

text: LL cockerel

text: Gallus gallus

text: Abdominal adipose

text: abdominal adipose

text: GSM1054371: Chicken Abdominal fat, lean line (LL), 7 week of age, biological replicate 1, techical replicate 1


text: Gene Expression Omnibus

text: live

text: Generic

text: 7 week

text: source: LL_Adipose_Wk7

text: LL cockerel

text: Gallus gallus

text: Abdominal adipose

text: abdominal adipose

text: GSM1054372: Chicken Abdominal fat, lean line (LL), 7 week of age, biological replicate 1, techical replicate 2


text: Gene Expression Omnibus

text: live

text: Generic

text: 7 week

text: source: LL_Adipose_Wk7

text: LL cockerel

text: Gallus gallus

text: Abdominal adipose

text: abdominal adipose

text: GSM1054373: Chicken Abdominal fat, lean line (LL), 7 week of age, biological replicate 1, techical replicate 3


text: Gene Expression Omnibus

text: live

text: Generic

text: 7 week

text: source: LL_Adipose_Wk7

text: LL cockerel

text: Gallus gallus

text: Abdominal adipose

text: abdominal adipose

text: GSM1054374: Chicken Abdominal fat, lean line (LL), 7 week of age, biological replicate 2, techical replicate 1


text: Gene Expression Omnibus

text: live

text: Generic

text: 7 week

text: source: LL_Adipose_Wk7

text: LL cockerel

text: Gallus gallus

text: Abdominal adipose

text: abdominal adipose

text: GSM1054375: Chicken Abdominal fat, lean line (LL), 7 week of age, biological replicate 2, techical replicate 2


text: Gene Expression Omnibus

text: live

text: Generic

text: 7 week

text: source: LL_Adipose_Wk7

text: LL cockerel

text: Gallus gallus

text: Abdominal adipose

text: abdominal adipose

text: GSM1054376: Chicken Abdominal fat, lean line (LL), 7 week of age, biological replicate 2, techical replicate 3


text: Gene Expression Omnibus

text: live

text: Generic

text: 7 week

text: source: LL_Adipose_Wk7

text: LL cockerel

text: Gallus gallus

text: Abdominal adipose

text: abdominal adipose

text: GSM1054377: Chicken Abdominal fat, lean line (LL), 7 week of age, biological replicate 3, techical replicate 1


text: Gene Expression Omnibus

text: live

text: Generic

text: 7 week

text: source: LL_Adipose_Wk7

text: LL cockerel

text: Gallus gallus

text: Abdominal adipose

text: abdominal adipose

text: GSM1054378: Chicken Abdominal fat, lean line (LL), 7 week of age, biological replicate 3, techical replicate 2


text: Gene Expression Omnibus

text: live

text: Generic

text: 7 week

text: source: LL_Adipose_Wk7

text: LL cockerel

text: Gallus gallus

text: Abdominal adipose

text: abdominal adipose

text: GSM1054379: Chicken Abdominal fat, lean line (LL), 7 week of age, biological replicate 3, techical replicate 3


text: Gene Expression Omnibus

text: live

text: Generic

text: 7 week

text: source: LL_Adipose_Wk7

text: LL cockerel

text: Gallus gallus

text: Abdominal adipose

text: abdominal adipose

text: GSM1054380: Chicken Abdominal fat, lean line (LL), 7 week of age, biological replicate 4, techical replicate 1


text: Gene Expression Omnibus

text: live

text: Generic

text: 7 week

text: source: LL_Adipose_Wk7

text: LL cockerel

text: Gallus gallus

text: Abdominal adipose

text: abdominal adipose

text: GSM1054381: Chicken Abdominal fat, lean line (LL), 7 week of age, biological replicate 4, techical replicate 2


text: Gene Expression Omnibus

text: live

text: Generic

text: 7 week

text: source: LL_Adipose_Wk7

text: LL cockerel

text: Gallus gallus

text: Abdominal adipose

text: abdominal adipose

text: GSM1054382: Chicken Abdominal fat, lean line (LL), 7 week of age, biological replicate 4, techical replicate 3


text: Korea university

text: live

text: Generic

text: Staphylococcus sp. OJ82

text: Staphylococcus sp.OJ82 1% NaCl

characteristic: strain

text: Staphylococcus sp.OJ82 1% NaCl

text: 1% NaCl

characteristic: treatment


characteristic: External Id

text: Korea university

text: live

text: Generic

text: Staphylococcus sp. OJ82

text: Staphylococcus sp.OJ82 11% NaCl

text: Staphylococcus sp.OJ82 11% NaCl

text: 11% NaCl


text: Fred Hutchinson Cancer Research Center

characteristic: INSDC last update

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.human-gut

text: human gut

characteristic: biome

characteristic: collection date

text: 16S rRNA amplicon of V3 (27f-512r)

text: MIGS/MIMS/MIMARKS.human-gut

characteristic: env package

text: V3 region of 16S rRNA genes

characteristic: feature

text: USA: Seattle, WA

characteristic: geo loc name

text: healthy

characteristic: host disease

text: metagenome

characteristic: investigation type

text: 47.6097 N 122.3331 W

characteristic: lat lon

text: stool

characteristic: material

text: human gut metagenome

characteristic: project name

text: stool

characteristic: samp mat process

text: stool kit

text: human feces

text: Homo sapiens

characteristic: specific host


text: Fred Hutchinson Cancer Research Center

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIMS.me

characteristic: NCBI submission model

text: MIGS/MIMS/MIMARKS.human-gut

characteristic: NCBI submission package

characteristic: SRA accession

text: human gut

text: 16S rRNA amplicon of V3 (27f-512r)

characteristic: description

text: MIGS/MIMS/MIMARKS.human-gut

text: V3 region of 16S rRNA genes

text: USA: Seattle, WA

text: metagenome

text: 47.6097 N 122.3331 W

text: stool

text: human gut metagenome

characteristic: organism

text: Homo sapiens

characteristic: title


characteristic: External Id

text: Fred Hutchinson Cancer Research Center

characteristic: INSDC last update

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.human-gut

text: human gut

characteristic: biome

characteristic: collection date

text: 16S rRNA amplicon of V3 (27f-512r)

text: MIGS/MIMS/MIMARKS.human-gut

characteristic: env package

text: V3 region of 16S rRNA genes

characteristic: feature

text: USA: Seattle, WA

characteristic: geo loc name

text: metagenome

text: technical replicate

characteristic: label

text: 47.6097 N 122.3331 W

text: stool

text: human gut metagenome

text: Homo sapiens


text: IExC, DEAIC, CNIC

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: control

characteristic: agent

text: HL-1 cardiomyocyte

characteristic: cell type

text: Mus musculus

text: HL-1 cardiomyocyte

text: heart

characteristic: tissue

text: HL-1 + Vehicle rep 1


text: IExC, DEAIC, CNIC

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: control

text: HL-1 cardiomyocyte

text: Mus musculus

text: HL-1 cardiomyocyte

text: heart

text: HL-1 + Vehicle rep 2


characteristic: External Id

text: IExC, DEAIC, CNIC

characteristic: INSDC last update

text: live

text: Generic

text: control

text: HL-1 cardiomyocyte

text: Mus musculus

characteristic: organism

text: HL-1 cardiomyocyte

text: heart

text: HL-1 + Vehicle rep 3

characteristic: title


text: IExC, DEAIC, CNIC

text: live

text: Generic

text: HL-1 cardiomyocyte

text: Mus musculus

text: HL-1 cardiomyocyte

text: heart

text: HL-1 + BRL rep 1


text: IExC, DEAIC, CNIC

text: live

text: Generic

text: HL-1 cardiomyocyte

text: Mus musculus

text: HL-1 cardiomyocyte

text: heart

text: HL-1 + BRL rep 2


text: IExC, DEAIC, CNIC

text: live

text: Generic

text: HL-1 cardiomyocyte

text: Mus musculus

text: HL-1 cardiomyocyte

text: heart

text: HL-1 + BRL rep 3


text: Jin Lab, Human Genetics, Emory University

text: live

text: Generic

text: bone marrow mononuclear cells

text: Mus musculus

text: Mouse bone marrow mononuclear cells

text: B6.SJL (CD45.1)

characteristic: strain

text: Input DNA from Control (MSCVneo +MSCVpuro) treated cells

text: Control (MSCVneo +MSCVpuro)

characteristic: treatment


text: live

text: Generic

characteristic: antibody

text: bone marrow mononuclear cells

text: Mus musculus

text: Mouse bone marrow mononuclear cells

text: B6.SJL (CD45.1)

text: 5hmC enriched DNA from Control (MSCVneo +MSCVpuro) treated cells

text: Control (MSCVneo +MSCVpuro)


characteristic: INSDC center name

text: live

text: Generic

text: bone marrow mononuclear cells

text: Mus musculus

text: Mouse bone marrow mononuclear cells

text: B6.SJL (CD45.1)

text: 5hmC enriched DNA from MLL-AF9 (MSCVneo-MLL-AF9+MSCVpuro) treated cells

text: MLL-AF9 (MSCVneo-MLL-AF9+MSCVpuro)


characteristic: INSDC first public

text: live

text: Generic

text: bone marrow mononuclear cells

text: Mus musculus

text: Mouse bone marrow mononuclear cells

text: B6.SJL (CD45.1)

text: 1216 Control (MSCVneo +MSCVpuro) polyA RNA-Seq

text: Control (MSCVneo +MSCVpuro)


text: live

text: Generic

text: bone marrow mononuclear cells

text: Mus musculus

text: Mouse bone marrow mononuclear cells

text: B6.SJL (CD45.1)

text: 2385 Control (MSCVneo +MSCVpuro) polyA RNA-Seq

text: Control (MSCVneo +MSCVpuro)


text: live

text: Generic

text: bone marrow mononuclear cells

text: Mus musculus

text: Mouse bone marrow mononuclear cells

text: B6.SJL (CD45.1)

text: 2387 Control (MSCVneo +MSCVpuro) polyA RNA-Seq

text: Control (MSCVneo +MSCVpuro)


text: live

text: Generic

text: bone marrow mononuclear cells

text: Mus musculus

text: Mouse bone marrow mononuclear cells

text: B6.SJL (CD45.1)

text: 1302 MLL-AF9 (MSCVneo-MLL-AF9+MSCVpuro) polyA RNA-Seq

text: MLL-AF9 (MSCVneo-MLL-AF9+MSCVpuro)