SMP TIDE_0001_CF1

text: MBL

text: live

text: Generic

text: marine sediment metagenome

text: marine sediment metagenome

text: JLB_TIDE_Bv6 - TIDE_0001_CF1


SMP TIDE_0002_CF2

status: PUBLIC

characteristic: External Id

text: MBL

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: marine sediment metagenome

characteristic: description

text: marine sediment metagenome

characteristic: organism

text: JLB_TIDE_Bv6 - TIDE_0002_CF2

characteristic: title


SMP TIDE_0003_LF1

text: MBL

text: live

text: Generic

text: marine sediment metagenome

text: marine sediment metagenome

text: JLB_TIDE_Bv6 - TIDE_0003_LF1


SMP TIDE_0004_LF2

text: MBL

text: live

text: Generic

text: marine sediment metagenome

text: marine sediment metagenome

text: JLB_TIDE_Bv6 - TIDE_0004_LF2


SMP TIDE_0005_HF1

text: MBL

text: live

text: Generic

text: marine sediment metagenome

text: marine sediment metagenome

text: JLB_TIDE_Bv6 - TIDE_0005_HF1


SMP TIDE_0006_HF2

text: MBL

text: live

text: Generic

text: marine sediment metagenome

text: marine sediment metagenome

text: JLB_TIDE_Bv6 - TIDE_0006_HF2


SMP TIDE_0007_XF1

text: MBL

text: live

text: Generic

text: marine sediment metagenome

text: marine sediment metagenome

text: JLB_TIDE_Bv6 - TIDE_0007_XF1


SMP TIDE_0008_XF2

text: MBL

text: live

text: Generic

text: marine sediment metagenome

text: marine sediment metagenome

text: JLB_TIDE_Bv6 - TIDE_0008_XF2


SMP West_Aug

text: MBL

text: live

text: Generic

text: marine sediment metagenome

text: marine sediment metagenome

text: JLB_TIDE_Bv6 - West_Aug


SMP West_June

text: MBL

text: live

text: Generic

text: marine sediment metagenome

text: marine sediment metagenome

text: JLB_TIDE_Bv6 - West_June


SMP West_May

text: MBL

text: live

text: Generic

text: marine sediment metagenome

text: marine sediment metagenome

text: JLB_TIDE_Bv6 - West_May


SMP West_Sept

text: MBL

text: live

text: Generic

text: marine sediment metagenome

text: marine sediment metagenome

text: JLB_TIDE_Bv6 - West_Sept


text: Helin, BRIC, University of Copenhagen

text: live

text: Generic

text: embryonic stem cells

tag: attribute

characteristic: cell type

text: ChIP

characteristic: chip or dip

characteristic: chip/dip antibody

text: shScr

characteristic: genotype/variation

text: Mus musculus

text: embryonic stem cells


text: Helin, BRIC, University of Copenhagen

text: live

text: Generic

text: embryonic stem cells

text: ChIP

text: Mus musculus

text: embryonic stem cells


text: Helin, BRIC, University of Copenhagen

text: live

text: Generic

text: embryonic stem cells

text: ChIP

text: Sin3A from Abcam

text: untransfected

text: Mus musculus

text: embryonic stem cells


text: Helin, BRIC, University of Copenhagen

text: live

text: Generic

text: embryonic stem cells

text: ChIP

text: Sin3A from Santa Cruz

text: untransfected

text: Mus musculus

text: embryonic stem cells


text: Helin, BRIC, University of Copenhagen

text: live

text: Generic

text: embryonic stem cells

text: ChIP

text: IgG ctrl

text: untransfected

text: Mus musculus

text: embryonic stem cells


text: Helin, BRIC, University of Copenhagen

text: live

text: Generic

text: embryonic stem cells

text: DIP

text: hydroxymethylcytosine

text: untransfected

text: Mus musculus

text: embryonic stem cells

text: hmC


text: Helin, BRIC, University of Copenhagen

text: live

text: Generic

text: embryonic stem cells

text: DIP

text: hydroxymethylcytosine

text: shScr

text: Mus musculus

text: embryonic stem cells


text: Helin, BRIC, University of Copenhagen

text: live

text: Generic

text: embryonic stem cells

text: DIP

text: hydroxymethylcytosine

text: Mus musculus

text: embryonic stem cells


text: Helin, BRIC, University of Copenhagen

text: live

text: Generic

text: embryonic stem cells

text: DIP

text: hydroxymethylcytosine

text: Dnmt tripple knock out

text: Mus musculus

text: embryonic stem cells


text: Helin, BRIC, University of Copenhagen

text: live

text: Generic

text: embryonic stem cells

text: DIP

text: methycytosine

text: untransfected

text: Mus musculus

text: embryonic stem cells

text: mC


text: Helin, BRIC, University of Copenhagen

text: live

text: Generic

text: embryonic stem cells

text: DIP

text: methycytosine

text: shScr

text: Mus musculus

text: embryonic stem cells


text: Helin, BRIC, University of Copenhagen

text: live

text: Generic

text: embryonic stem cells

text: DIP

text: methycytosine

text: Mus musculus

text: embryonic stem cells


text: Helin, BRIC, University of Copenhagen

text: live

text: Generic

text: embryonic stem cells

text: DIP

text: methycytosine

text: Dnmt tripple knock out

text: Mus musculus

text: embryonic stem cells


text: Helin, BRIC, University of Copenhagen

text: live

text: Generic

text: embryonic stem cells

text: DIP

text: IgG ctrl

text: untransfected

text: Mus musculus

text: embryonic stem cells


text: Helin, BRIC, University of Copenhagen

text: live

text: Generic

text: embryonic stem cells

text: DIP

text: IgG ctrl

text: Dnmt tripple knock out

text: Mus musculus

text: embryonic stem cells


Cdiff 31618

text: Leiden University Medical Center

text: live

text: Generic

text: Clostridioides difficile

text: Clostridium difficile pig strain


text: USC

text: live

text: Generic

text: The cells were crosslinked with 1% formaldehyde for one minute at room temperature before the reaction was stopped with 125mM final concentration of Glycine. The cells were grown in conditions provided by the ENCODE data coordination center on UCSC website and frozen in batches of 25 million.

text: Homo sapiens

text: GM12878 Human Lymphocytic Cells Crosslinked with 1% Formaldehyde


IRF4 ChIP-Seq in HBL1

text: CIT

text: live

text: Generic

text: Homo sapiens

text: IRF4 ChIP-Seq in HBL1


IRF4 ChIP-Seq in Kms12

text: CIT

text: live

text: Generic

text: Homo sapiens

text: IRF4 ChIP-Seq in Kms12


IRF4 ChIP-Seq in Ly19

text: CIT

text: live

text: Generic

text: Homo sapiens

text: IRF4 ChIP-Seq in Ly19


SMP ENV2

text: MBL

text: live

text: Generic

text: marine sediment metagenome

text: marine sediment metagenome

text: JLB_TIDE_Bv6 - ENV2


SMP ENV3

text: MBL

text: live

text: Generic

text: marine sediment metagenome

text: marine sediment metagenome

text: JLB_TIDE_Bv6 - ENV3


SMP ENV4

text: MBL

text: live

text: Generic

text: marine sediment metagenome

text: marine sediment metagenome

text: JLB_TIDE_Bv6 - ENV4


SMP ENV5

text: MBL

text: live

text: Generic

text: marine sediment metagenome

text: marine sediment metagenome

text: JLB_TIDE_Bv6 - ENV5


SMP ENV6

text: MBL

text: live

text: Generic

text: marine sediment metagenome

text: marine sediment metagenome

text: JLB_TIDE_Bv6 - ENV6


SMP HOM1

text: MBL

text: live

text: Generic

text: marine sediment metagenome

text: marine sediment metagenome

text: JLB_TIDE_Bv6 - HOM1


SMP HOM2

text: MBL

text: live

text: Generic

text: marine sediment metagenome

text: marine sediment metagenome

text: JLB_TIDE_Bv6 - HOM2


SMP ENV1

text: MBL

text: live

text: Generic

text: marine sediment metagenome

text: marine sediment metagenome

text: JLB_TIDE_Bv6 - ENV1


text: Princeton University

text: live

text: Generic

text: Multiplexed library of 96 barcoded progeny from an F1 back-cross: F1 female [Drosophila simulans w501 X Drosophila sechellia w1] X male Drosophila sechellia w1.

text: Drosophila simulans

text: Vinager fly Multiplexed Shotgun Genotyping for Rapid and Efficient Genetic Mapping


text: UIUC

text: live

text: Generic

text: The fecal sample that collected from the wild manatee that lived in Belize.

text: gut metagenome

text: Different Groups of Novel Bacteroidetes Dominate the Gut Microbial Community of Wild Manatees (Trichechus manatus) from Belize and Florida (USA) revealed by 454-pyrosequencing


text: UIUC

text: live

text: Generic

text: The fecal sample that collected from the wild manatee that lived in Florida.

text: gut metagenome


text: UIUC

text: live

text: Generic

text: Water samples collected in the river where Florida manatee lives.

text: freshwater sediment metagenome


text: UIUC

text: live

text: Generic

text: Sediment sample collected from the river that Florida manatee lives.

text: freshwater sediment metagenome


text: Duke University

text: live

text: Generic

text: Strain EM93, obtained from Ann Rouse (who in turn obtained the strain from Duccio Cavalieri, University of Florence). We believe this to be nearly identical to ATCC 204501

text: Saccharomyces cerevisiae

text: EM93 (PMY070)


CD8 Naive TC001

text: Gene Expression Omnibus

text: live

text: 46, XY

characteristic: KARYOTYPE

text: Generic

text: Weiss Lab UCSF

characteristic: biomaterial provider

text: Primary Cell

characteristic: biomaterial type

text: CD8 Naive Primary Cell

text: CD8 Naive Primary Cells, TC001

text: 21 years

characteristic: donor age

text: Caucasian

characteristic: donor ethnicity

text: Disease Free

characteristic: donor health status

characteristic: donor id

text: male

characteristic: donor sex

characteristic: markers

text: genomic DNA

characteristic: molecule

text: Homo sapiens

text: Generic sample from Homo sapiens


Breast Luminal Epi RM037

characteristic: External Id

text: Gene Expression Omnibus

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: 46, XX

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Thea Tlsty Lab UCSF

text: Primary Cell

text: Luminal epithelial cell

text: Breast, Luminal Epithelial Cells, RM037

characteristic: description

text: 39 years

text: African American

text: Disease Free

text: female

text: genomic DNA

text: Homo sapiens

text: Generic sample from Homo sapiens


Breast Luminal Epi RM066

text: Gene Expression Omnibus

text: live

text: 46, XX

characteristic: KARYOTYPE

text: Generic

text: Thea Tlsty Lab UCSF

characteristic: biomaterial provider

text: Primary Cell

characteristic: biomaterial type

text: Luminal epithelial cell

characteristic: cell type

text: Breast, Luminal Epithelial Cells, RM066

text: 36 years

characteristic: donor age

text: African American

text: Disease Free

text: female

text: genomic DNA

text: Homo sapiens

characteristic: organism

text: Generic sample from Homo sapiens

characteristic: title


Breast Luminal Epi RM070

characteristic: External Id

text: Gene Expression Omnibus

text: live

text: 46, XX

text: Generic

text: Thea Tlsty Lab UCSF

text: Primary Cell

text: Luminal epithelial cell

text: Breast, Luminal Epithelial Cells, RM070

text: 26 years

text: African American

characteristic: donor ethnicity

text: Disease Free

characteristic: donor health status

characteristic: donor id

text: female

characteristic: donor sex

characteristic: markers

text: genomic DNA

characteristic: molecule

text: Homo sapiens

characteristic: parity

text: Generic sample from Homo sapiens


Breast Luminal Epi RM071

text: Gene Expression Omnibus

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: 46, XX

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Thea Tlsty Lab UCSF

text: Primary Cell

text: Luminal epithelial cell

text: Breast, Luminal Epithelial Cells, RM071

text: 37 yrs

text: Caucasian

text: Disease Free

text: female

text: genomic DNA

text: Homo sapiens

text: Generic sample from Homo sapiens


Breast Myo Epi RM066

text: Gene Expression Omnibus

text: live

text: 46, XX

characteristic: KARYOTYPE

text: Generic

text: Thea Tlsty Lab UCSF

characteristic: biomaterial provider

text: Primary Cell

characteristic: biomaterial type

text: myo epithelial cell

characteristic: cell type

text: Breast, Myoepithelial Cells, RM066

characteristic: description

characteristic: donor age

text: African American

text: Disease Free

text: female

text: genomic DNA

text: Homo sapiens

characteristic: organism

text: Generic sample from Homo sapiens

characteristic: title


Breast Myo Epi RM070

characteristic: External Id

text: Gene Expression Omnibus

text: live

text: 46, XX

text: Generic

text: Thea Tlsty Lab UCSF

text: Primary Cell

text: myo epithelial cell

text: Breast, Myoepithelial Cells, RM070

text: 26 years

text: African American

characteristic: donor ethnicity

text: Disease Free

characteristic: donor health status

characteristic: donor id

text: female

characteristic: donor sex

characteristic: markers

text: genomic DNA

characteristic: molecule

text: Homo sapiens

characteristic: parity

text: Generic sample from Homo sapiens


Breast Myo Epi RM071

text: Gene Expression Omnibus

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: 46, XX

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Thea Tlsty Lab UCSF

text: Primary Cell

text: myo epithelial cell

text: Breast, Myoepithelial Cells, RM071

text: 37 yrs

text: Caucasian

text: Disease Free

text: female

text: genomic DNA

text: Homo sapiens

text: Generic sample from Homo sapiens


Breast Stem Cell RM066

text: Gene Expression Omnibus

text: live

text: 46, XX

characteristic: KARYOTYPE

text: Generic

text: Thea Tlsty Lab UCSF

characteristic: biomaterial provider

text: Primary Cell

characteristic: biomaterial type

text: stem cell

characteristic: cell type

text: Breast, Stem Cells, RM066

characteristic: description

text: 36 years

characteristic: donor age

text: African American

text: Disease Free

text: female

text: genomic DNA

text: Homo sapiens

characteristic: organism

text: Generic sample from Homo sapiens

characteristic: title


Breast Stem Cell RM070

characteristic: External Id

text: Gene Expression Omnibus

text: live

text: 46, XX

text: Generic

text: Thea Tlsty Lab UCSF

text: Primary Cell

text: stem cell

text: Breast, Stem Cells, RM070

text: 26 years

text: African American

characteristic: donor ethnicity

characteristic: donor id

text: female

characteristic: donor sex

characteristic: markers

text: genomic DNA

characteristic: molecule

text: Homo sapiens

characteristic: parity

text: Generic sample from Homo sapiens


Breast Stem Cell RM071

text: Gene Expression Omnibus

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: 46, XX

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Thea Tlsty Lab UCSF

text: Primary Cell

text: stem cell

text: Breast, Stem Cells, RM071

text: 37 yrs

text: Caucasian

text: Disease Free

characteristic: donor health status

text: female

text: genomic DNA

text: Homo sapiens

text: Generic sample from Homo sapiens


CD4 Memory TC003

text: Gene Expression Omnibus

text: live

text: 46, XX

characteristic: KARYOTYPE

text: Generic

characteristic: SRA accession

text: Weiss Lab UCSF

characteristic: biomaterial provider

text: Primary Cell

characteristic: biomaterial type

text: CD4 Memory

characteristic: cell type

text: CD4 Memory Primary Cells, TC003

characteristic: description

characteristic: donor age

text: Caucasian

text: Disease Free

text: female

text: genomic DNA

text: Homo sapiens

characteristic: organism

text: Generic sample from Homo sapiens


Breast vHMEC RM035

characteristic: External Id

text: Gene Expression Omnibus

text: live

text: Generic

text: Tlsty Lab, University of California, San Francisco

text: Primary Cell Culture

text: Variant Human Mammary Epithelial Cells

text: spilt 1:5 in MEGM medium (Lonza Inc.)

characteristic: culture conditions

text: Breast, vHMEC, RM035

text: Caucasian

characteristic: donor ethnicity

text: Disease Free

characteristic: donor id

text: female

characteristic: donor sex

text: genomic DNA

characteristic: molecule

text: Homo sapiens

text: Generic sample from Homo sapiens

characteristic: title


CD4 Memory TC013

text: Gene Expression Omnibus

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: 46, XY

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Weiss Lab UCSF

text: Primary Cell

text: CD4 Memory

text: CD4 Memory Primary Cells, TC013

text: Asian

text: Disease Free

text: male

characteristic: markers

text: genomic DNA

text: Homo sapiens

text: Generic sample from Homo sapiens


CD4 Naive TC013

text: Gene Expression Omnibus

text: live

text: 46, XY

characteristic: KARYOTYPE

text: Generic

characteristic: SRA accession

text: Weiss Lab UCSF

characteristic: biomaterial provider

text: Primary Cell

characteristic: biomaterial type

text: CD4 Naive

characteristic: cell type

text: CD4 Naive Primary Cells, TC013

characteristic: description

characteristic: donor age

text: Asian

text: Disease Free

characteristic: donor health status

text: male

text: genomic DNA

text: Homo sapiens

text: Generic sample from Homo sapiens


CD8 Naive TC010

characteristic: External Id

text: Gene Expression Omnibus

text: live

text: 46, XY

text: Generic

text: Weiss Lab UCSF

text: Primary Cell

text: CD8 Naive Primary Cell

text: CD8 Naive Primary Cells, TC010

text: Caucasian

characteristic: donor ethnicity

text: Disease Free

characteristic: donor id

text: male

characteristic: donor sex

text: genomic DNA

characteristic: molecule

text: Homo sapiens

characteristic: organism

text: Generic sample from Homo sapiens

characteristic: title


CD8 Naive TC013

text: Gene Expression Omnibus

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: 46, XY

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Weiss Lab UCSF

text: Primary Cell

text: CD8 Naive

text: CD8 Naive Primary Cells, TC013

text: Asian

text: Disease Free

text: male

text: genomic DNA

text: Homo sapiens

text: Generic sample from Homo sapiens


Breast Myo Epi RM080

text: Gene Expression Omnibus

text: live

text: 46, XX

characteristic: KARYOTYPE

text: Generic

characteristic: SRA accession

text: Thea Tlsty Lab UCSF

characteristic: biomaterial provider

text: Primary Cell

characteristic: biomaterial type

text: myo epithelial cell

characteristic: cell type

text: Breast, Myoepithelial Cells, RM080

characteristic: description

text: African-American

text: Disease Free

text: female

text: Left

characteristic: location

characteristic: markers

text: genomic DNA

text: Homo sapiens

characteristic: parity

text: Generic sample from Homo sapiens


PBMC TC010

characteristic: External Id

text: Gene Expression Omnibus

text: live

text: 46, XY

text: Generic

text: Weiss Lab UCSF

text: Primary Cell

text: O+

characteristic: blood type

text: Peripheral Blood Mononuclear Cell

text: Peripheral Blood Mononuclear Primary Cells, TC010

characteristic: donor age

text: Caucasian

characteristic: donor ethnicity

text: Disease Free

characteristic: donor health status

characteristic: donor id

text: male

characteristic: donor sex

text: genomic DNA

characteristic: molecule

text: Homo sapiens

characteristic: organism

text: Generic sample from Homo sapiens

characteristic: title


PBMC TC012

text: Gene Expression Omnibus

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: 46, XY

characteristic: KARYOTYPE

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Weiss Lab UCSF

characteristic: biomaterial provider

text: Primary Cell

text: Peripheral Blood Mononuclear Cell

text: Peripheral Blood Mononuclear Primary Cells, TC012

text: Indian/Arabian

text: Disease Free

text: male

text: genomic DNA

text: Homo sapiens

text: Generic sample from Homo sapiens


PBMC TC013

characteristic: External Id

text: Gene Expression Omnibus

text: live

text: 46, XY

text: Generic

text: Weiss Lab UCSF

text: Primary Cell

characteristic: biomaterial type

text: Peripheral Blood Mononuclear Cell

characteristic: cell type

text: Peripheral Blood Mononuclear Primary Cells, TC013

characteristic: description

characteristic: donor age

text: Asian

characteristic: donor ethnicity

text: Disease Free

text: male

text: genomic DNA

text: Homo sapiens

text: Generic sample from Homo sapiens


CD4 Memory TC007

text: Gene Expression Omnibus

text: live

text: 46, XX

text: Generic

text: Weiss Lab UCSF

text: Primary Cell

text: A+

characteristic: blood type

text: CD4 Memory

text: CD4 Memory Primary Cells, TC007

text: Asian

text: Disease Free

characteristic: donor health status

characteristic: donor id

text: female

characteristic: donor sex

text: CD4, CD45RO+

characteristic: markers

text: genomic DNA

characteristic: molecule

text: Homo sapiens

characteristic: organism

text: Generic sample from Homo sapiens

characteristic: title


CD4 Naive TC007

text: Gene Expression Omnibus

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: 46, XX

characteristic: KARYOTYPE

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Weiss Lab UCSF

text: Primary Cell

text: A+

text: CD4 Naive Primary Cell

text: CD4 Naive Primary Cells, TC007

text: Asian

text: Disease Free

text: female

text: CD4+, CD45RA+

text: genomic DNA

text: Homo sapiens

text: Generic sample from Homo sapiens


CD8 Naive TC007

characteristic: External Id

text: Gene Expression Omnibus

text: live

text: 46, XX

text: Generic

characteristic: SRA accession

text: Weiss Lab UCSF

characteristic: biomaterial provider

text: Primary Cell

characteristic: biomaterial type

text: A+

text: CD8 Naive Primary Cell

characteristic: cell type

text: CD8 Naive Primary Cells, TC007

characteristic: description

characteristic: donor age

text: Asian

characteristic: donor ethnicity

text: Disease Free

text: female

text: CD8+, CD45RA+

text: genomic DNA

text: Homo sapiens

text: Generic sample from Homo sapiens


PBMC TC007

text: Gene Expression Omnibus

text: live

text: 46, XX

text: Generic

text: Weiss Lab UCSF

text: Primary Cell

text: A+

characteristic: blood type

text: Peripheral Blood Mononuclear Primary Cells, TC007

text: Asian

text: Disease Free

characteristic: donor health status

characteristic: donor id

text: female

characteristic: donor sex

text: genomic DNA

characteristic: molecule

text: Homo sapiens

characteristic: organism

text: Generic sample from Homo sapiens

characteristic: title


CD4 Naive TC009

text: Gene Expression Omnibus

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: 46, XX

characteristic: KARYOTYPE

text: Generic

characteristic: NCBI submission model

text: Weiss Lab UCSF

text: Primary Cell

text: O+

text: CD4 Naive Primary Cell

text: CD4 Naive Primary Cells, TC009

text: 30 years

text: Caucasian

text: Disease Free

text: female

text: CD4+, CD45RA+

characteristic: markers

text: genomic DNA

text: Homo sapiens

text: Generic sample from Homo sapiens


CD8 Naive TC009

characteristic: External Id

text: Gene Expression Omnibus

text: live

text: 46, XX

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Weiss Lab UCSF

characteristic: biomaterial provider

text: Primary Cell

characteristic: biomaterial type

text: O+

text: CD8 Naive Primary Cell

characteristic: cell type

text: CD8 Naive Primary Cells, TC009

characteristic: description

text: 30 years

characteristic: donor age

text: Caucasian

text: Disease Free

text: female

text: CD8+, CD45RA+

text: genomic DNA

text: Homo sapiens

text: Generic sample from Homo sapiens


PBMC TC009

text: Gene Expression Omnibus

text: live

text: 46, XX

text: Generic

text: Weiss Lab UCSF

text: Primary Cell

text: O+

characteristic: blood type

text: Peripheral Blood Mononuclear Cell

text: Peripheral Blood Mononuclear Primary Cells, TC009

text: 30 years

text: Caucasian

characteristic: donor ethnicity

text: Disease Free

characteristic: donor health status

characteristic: donor id

text: female

characteristic: donor sex

text: genomic DNA

characteristic: molecule

text: Homo sapiens

characteristic: organism

text: Generic sample from Homo sapiens

characteristic: title


text: Duke University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Saccharomyces cerevisiae

text: YJM128 (PMY127)


characteristic: External Id

text: Duke University

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Saccharomyces cerevisiae

text: YJM223 (PMY132)


text: Duke University

text: live

text: Generic

text: Saccharomyces cerevisiae

text: YJM308 (PMY141)


text: Duke University

text: live

text: Generic

text: Saccharomyces cerevisiae

text: YJM309 (PMY142)


text: Duke University

text: live

text: Generic

text: Clinical isolate, obtained from John McCusker, Duke University.

characteristic: description

text: Saccharomyces cerevisiae

text: YJM311 (PMY144)


text: Duke University

text: live

text: Generic

text: Vineyard isolate. Formerly strain ARA316a (Ann Rouse).

text: Saccharomyces cerevisiae


text: Duke University

text: live

text: Generic

text: Isolated from muscadine grapes collected in North Carolina, USA by Ann Rouse (formerly ARN239a).

text: Saccharomyces cerevisiae


text: Duke University

text: live

text: Generic

text: Saccharomyces cerevisiae

text: YJM222 (PMY131)


text: Rudel lab, Department of Microbiology, University of Würzburg

text: live

text: Generic

text: Elementary Bodies

characteristic: life cycle form

text: Chlamydia pneumoniae CWL029

text: total RNA

characteristic: sample type

text: Elementary Bodies

characteristic: strain

text: EB-: total RNA (ACGTGC)


text: live

text: Generic

text: Elementary Bodies

text: Chlamydia pneumoniae CWL029

text: total RNA

text: Elementary Bodies

text: EB-: total RNA (GTAT)


text: live

text: Generic

text: Elementary Bodies

text: Chlamydia pneumoniae CWL029

text: RNA enriched for native 5' ends

text: Elementary Bodies

text: EB+: RNA enriched for native 5' (GTGA)


text: live

text: Generic

text: Elementary Bodies

text: Chlamydia pneumoniae CWL029

text: RNA enriched for native 5' ends

text: Elementary Bodies

text: EB+: RNA enriched for native 5' (AGCGTA)


text: live

text: Generic

text: Reticulate Bodies

text: Chlamydia pneumoniae CWL029

text: total RNA

text: Reticulate Bodies

text: RB-: total RNA (GTTC)


text: live

text: Generic

text: Reticulate Bodies

text: Chlamydia pneumoniae CWL029

text: total RNA

text: Reticulate Bodies

text: RB-: total RNA (AGTCAG)


text: live

text: Generic

text: Reticulate Bodies

text: Chlamydia pneumoniae CWL029

text: RNA enriched for native 5' ends

text: Reticulate Bodies

text: RB+: RNA enriched for native 5' (TCAT)


text: live

text: Generic

text: Reticulate Bodies

text: Chlamydia pneumoniae CWL029

text: RNA enriched for native 5' ends

text: Reticulate Bodies

text: RB+: RNA enriched for native 5' (ATACTG)


text: Duke University

text: live

text: Generic

text: Woodland isolate isolated from oak tree exudate, provided by Paul Sniegowski, University of Pennsylvania.

text: Saccharomyces cerevisiae

text: YPS670 (PMY017)


text: MRC Human Reproductive Sciences Unit

text: live

text: Generic

text: Fibroblasts

characteristic: cell type

text: Adult

characteristic: developmental stage

text: Homo sapiens

text: Cancer-associated fibroblasts (CAF)

text: Prostate

characteristic: tissue

text: Cancer-associated fibroblasts (CAF)


text: MRC Human Reproductive Sciences Unit

text: live

text: Generic

text: Fibroblasts

text: Adult

text: Homo sapiens

characteristic: organism

text: Normal prostate fibroblasts (NPF)

text: Prostate

text: Normal prostate fibroblasts (NPF)

characteristic: title


text: MRC Human Reproductive Sciences Unit

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Fibroblasts and Epithelia

text: Fetal

text: Homo sapiens

text: Fetal prostate (EMB)

text: Prostate

text: Fetal prostate (EMB)


text: Duke University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Laboratory strain background Sigma 1278b, obtained from Joseph Heitman, Duke University.

text: Saccharomyces cerevisiae


text: Joint Genome Institute, U.S. Department of Energy

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Natrinema sp D12

text: Natrinema sp. DL2

characteristic: sample number

text: Generic sample from Natrinema sp. DL2


characteristic: External Id

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Fomitiporia mediterranea MF3/22

text: Fomitiporia mediterranea MF3/22

text: Generic sample from Fomitiporia mediterranea MF3/22


text: Baylor College of Medicine

text: live

text: MIGS.ba

text: Newbler v. 2.3-10192009

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

characteristic: culture-collection

text: Staphylococcus aureus subsp. aureus strain ATCC BAA-39

characteristic: description

characteristic: estimated size

text: Homo sapiens-associated habitat [ENVO:00009003]

characteristic: feature

text: Level 2: High-Quality Draft27.9x;83

characteristic: finishing strategy (depth of coverage)

text: not determined

characteristic: geo loc name

characteristic: host taxid

text: not determined

text: not determined

characteristic: lat lon

text: biological product [ENVO:02000043]

characteristic: material

text: Nasal

characteristic: misc_param: HMP body site

text: airways

characteristic: misc_param: HMP supersite

text: not determined

characteristic: nucleic acid extraction

text: not determined

text: Staphylococcus aureus aureus ATCC BAA-39

characteristic: project name

text: Reference Genome

text: not determined

characteristic: sequencing method

characteristic: sop

text: ATCC BAA-39, HUSA304

text: Homo sapiens

characteristic: specific host

text: ATCC BAA-39

text: aureus

characteristic: sub species

text: MIGS Cultured Bacterial/Archaeal sample from Staphylococcus aureus subsp. aureus ATCC BAA-39


Default Sample

characteristic: External Id

text: UIUC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: gut metagenome

characteristic: organism

text: Default Sample

characteristic: title


text: Gene Expression Omnibus

text: live

text: Generic

characteristic: batch

text: James Thompson Laboratory

characteristic: biomaterial provider

text: Cell Line

characteristic: biomaterial type

text: Human embryonic stem cells received from the James Thompson laboratory. Cells are from the H9 line.

characteristic: description

characteristic: line

text: Embryonic Stem Cell

characteristic: lineage

text: mTeSER

characteristic: medium

text: genomic DNA

characteristic: molecule

text: Homo sapiens

text: Between 30 and 50

characteristic: passage

text: female

characteristic: sex

text: Generic sample from Homo sapiens


characteristic: External Id

text: Emory University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Hypothalamus region of Brain of Male Adult vole individual 4376

text: Microtus ochrogaster

text: Hypothalamus region of Brain


text: Emory University

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Hypothalamus region of Brain of Adult vole individual 4413

text: Microtus ochrogaster

characteristic: organism

text: Hypothalamus region of Brain


text: Emory University

text: live

text: Generic

text: Liver region of Male Adult vole individual 4376

characteristic: description

text: Microtus ochrogaster

text: Liver region of individual 4376

characteristic: title


text: Emory University

text: live

text: Generic

text: Liver region of Male Adult vole individual 4413

text: Microtus ochrogaster

text: Liver region of individual 4413


text: Baylor College of Medicine

text: live

text: MIGS.ba

text: Newbler v. 2.3-10192009

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

characteristic: culture-collection

text: Mobiluncus curtisii subsp. curtisii strain ATCC 35241

characteristic: estimated size

characteristic: feature

text: Level 2: High-Quality Draft56x;21

characteristic: finishing strategy (depth of coverage)

text: not determined

characteristic: geo loc name

characteristic: host taxid

text: not determined

text: not determined

characteristic: lat lon

text: biological product [ENVO:02000043]

characteristic: material

text: Vaginal

characteristic: misc_param: HMP body site

characteristic: misc_param: HMP supersite

text: not determined

characteristic: nucleic acid extraction

text: not determined

text: Mobiluncus curtisii curtisii ATCC 35241

characteristic: project name

text: Reference Genome

text: not determined

characteristic: sequencing method

characteristic: sop

text: ATCC 35241, BV 345-16

text: Homo sapiens

characteristic: specific host

text: ATCC 35241

characteristic: strain

text: curtisii

characteristic: sub species

text: MIGS Cultured Bacterial/Archaeal sample from Mobiluncus curtisii subsp. curtisii ATCC 35241


characteristic: External Id

text: Baylor College of Medicine

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Newbler v. 2.3-10192009

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

characteristic: culture-collection

text: Peptoniphilus duerdenii strain ATCC BAA-1640

characteristic: description

text: Level 2: High-Quality Draft36.2x;61

text: not determined

text: not determined

text: not determined

text: biological product [ENVO:02000043]

text: Vaginal

text: not determined

text: not determined

text: Peptoniphilus duerdenii ATCC BAA-1640

characteristic: organism

text: Peptoniphilus duerdenii ATCC BAA-1640

text: Reference Genome

text: not determined

text: ATCC BAA-1640

text: Homo sapiens

text: ATCC BAA-1640

text: MIGS Cultured Bacterial/Archaeal sample from Peptoniphilus duerdenii ATCC BAA-1640

characteristic: title


ASue Transcriptome

text: University of Southern California

text: live

text: Generic

text: Arabidopsis thaliana

text: RNA-Seq of Arabidopsis suecica Leaf Transcriptome


text: Cellular and Molecular Medicine, Bioinformatics, Ottawa Health Research Institute, Ontario Genomics Innovation Centre (OGIC)

text: live

text: Generic

text: primary myoblasts

characteristic: cell type

text: Mus musculus

text: myoblasts with TAP tagged Pax7

text: BALB/c

characteristic: strain

text: skeletal muscle

characteristic: tissue of origin

text: TAP-Tagged Pax7


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: primary myoblasts

text: Mus musculus

text: myoblasts with TAP tagged Pax3

text: BALB/c

text: skeletal muscle

text: TAP-Tagged Pax3


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: primary myoblasts

text: Mus musculus

text: myoblasts

text: BALB/c

text: skeletal muscle

text: Control


text: Institute for Genomics and Systems Biology, University of Chicago

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Trl

characteristic: antibody name

text: Custom

characteristic: catalog

characteristic: developmental stage

text: White Lab

characteristic: manufacturer

text: Drosophila melanogaster

text: Trl_E0-8h_ChIPSeq_1 and 2


text: live

text: Generic

text: Drosophila melanogaster

characteristic: organism

characteristic: title


text: live

text: Generic

text: Custom

text: White Lab

text: Drosophila melanogaster

text: CG8478_E16-24h_ChIPSeq_1 and 2


text: MooreLab, Biochemistry & Molecular Pharmacology, UMass Medical School

text: live

text: Generic

text: embryonic day 18 (E18)

characteristic: age

text: cultured primary neurons

characteristic: cell type

text: Rattus norvegicus

characteristic: passages

text: TDP-43 (748C)

characteristic: rip antibody

text: rat cortical neurons, TDP-43 RIP

text: Sprague-Dawley

characteristic: strain

text: brain

characteristic: tissue

text: TDP-43 RIP-seq


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: embryonic day 18 (E18)

text: cultured primary neurons

text: Rattus norvegicus

text: non-specific rabbit IgG

text: rat cortical neurons, control

text: Sprague-Dawley

text: brain

text: CTL RIP-seq


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

characteristic: analyte type

text: SardiNIA

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Blood

characteristic: body site

text: GRU-IRB

text: Homo sapiens

text: female

characteristic: sex

text: Family/Twin/Trios

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

text: SardiNIA

characteristic: submitter handle

text: DNA sample from Blood of a human female participant in the dbGaP study SardiNIA Medical Sequencing Discovery Project


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: DNA

text: SardiNIA

text: Blood

text: GRU-IRB

text: Homo sapiens

characteristic: organism

text: female

text: Family/Twin/Trios

text: SardiNIA Medical Sequencing Discovery Project

text: SardiNIA

characteristic: title


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

text: SardiNIA

text: Blood

text: GRU-IRB

text: Homo sapiens

text: male

text: Family/Twin/Trios

text: SardiNIA

text: DNA sample from Blood of a human male participant in the dbGaP study SardiNIA Medical Sequencing Discovery Project


text: MSKCC

text: live

text: Generic

characteristic: SRA accession

text: ileum contents from untreated mice

characteristic: description

text: gut metagenome

text: Generic sample from gut metagenome


text: MSKCC

text: live

text: Generic

text: cecum contents from untreated mice

text: gut metagenome

text: Generic sample from gut metagenome


text: MSKCC

text: live

text: Generic

text: mice treated for 8 days with ampicillin

text: gut metagenome

text: Generic sample from gut metagenome


text: MSKCC

text: live

text: Generic

text: mice treated with ampicillin and allowed to recover for a week after antibiotic cessation

text: gut metagenome

text: Generic sample from gut metagenome


text: MSKCC

text: live

text: Generic

text: mice infected with VRE after ampicillin treatment and kept on ampicillin for another week

text: gut metagenome

text: Generic sample from gut metagenome


text: MSKCC

text: live

text: Generic

text: mice infected with VRE after ampicillin treatment and kept for a week with antibiotic-free water after infection

text: gut metagenome

text: Generic sample from gut metagenome


text: MSKCC

text: live

text: Generic

text: ileum contents from mice treated for a 8 days with ampicillin and allowed to recover for 1 week after antibiotic cessation

text: gut metagenome

text: Generic sample from gut metagenome


text: MSKCC

text: live

text: Generic

text: ileum contents from mice treated for a 8 days with ampicillin and allowed to recover for 2 weeks after antibiotic cessation

text: gut metagenome

text: Generic sample from gut metagenome


text: MSKCC

text: live

text: Generic

text: ileum contents from mice treated for a 8 days with ampicillin and allowed to recover for 4 weeks after antibiotic cessation

text: gut metagenome

text: Generic sample from gut metagenome


text: MSKCC

text: live

text: Generic

text: ileum contents from mice treated for a 8 days with ampicillin and allowed to recover 8 weeks after antibiotic cessation

text: gut metagenome

text: Generic sample from gut metagenome


text: MSKCC

text: live

text: Generic

text: cecum contents from mice treated for a 8 days with ampicillin and allowed to recover for 1 week after antibiotic cessation

text: gut metagenome

text: Generic sample from gut metagenome


text: MSKCC

text: live

text: Generic

text: cecum contents from mice treated for a 8 days with ampicillin and allowed to recover for 2 weeks after antibiotic cessation

text: gut metagenome

text: Generic sample from gut metagenome


text: MSKCC

text: live

text: Generic

text: cecum contents from mice treated for a 8 days with ampicillin and allowed to recover for 4 weeks after antibiotic cessation

text: gut metagenome

text: Generic sample from gut metagenome


text: MSKCC

text: live

text: Generic

text: cecum contents from mice treated for a 8 days with ampicillin and allowed to recover for 8 weeks after antibiotic cessation

text: gut metagenome

text: Generic sample from gut metagenome


text: MSKCC

text: live

text: Generic

text: gut metagenome

text: Sample from gut metagenome


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: analyte type

text: SardiNIA

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Blood

characteristic: body site

text: GRU-IRB

text: Homo sapiens

text: female

characteristic: sex

text: Family/Twin/Trios

characteristic: study design

text: SardiNIA


pooled thrombolitic mat amplicons

characteristic: External Id

text: University of Florida

characteristic: INSDC center name

text: live

text: Generic

text: Samples from 4 different mat types were collected in March 2008 from intertidal thrombolites located on the island of Highborne Cay, Exumas, Bahamas. The samples were immersed in RNALater and stored at -20C until processing. Genomic DNA was extracted from 80-100 mg cores using a modified xanthogenate extraction method optimized for microbialitic biofilms.

text: ecological metagenomes

text: Comparative diversity analyses of modern marine thrombolitic mats by barcoded pyrosequencing


text: University of Washington Genome Sciences - Shendure Lab

characteristic: INSDC first public

text: live

text: Generic

text: Escherichia coli

characteristic: organism

text: Genomic DNA isolated from a lab strain, CC118, of Escherichea coli


characteristic: INSDC last update

text: live

text: Generic

text: Homo sapiens

text: Genomic DNA purchased from Coriell industries for sample ref. NA18507

characteristic: title


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Homo sapiens

text: Genomic DNA isolated from a lymphoblast cell line for human: YH1


DMELAN

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Drosophila melanogaster

text: Genomic DNA isolated from Drosophila melanogaster, strain w1118


text: live

text: Generic

characteristic: SRA accession

text: Homo sapiens

text: Genomic DNA from SFARI-SSC, ID BK229.03


text: Oregon State University

text: live

text: Generic

text: A. thaliana infiltrated with 5x10^7 DC3000 hrcC, 7hpi

characteristic: description

text: Arabidopsis thaliana


text: Oregon State University

text: live

text: Generic

text: A. thaliana infiltrated with 5x10^7 DC3000 hrcC, 7hpi, 2nd replicate

text: Arabidopsis thaliana


text: Oregon State University

text: live

text: Generic

text: A. thaliana infiltrated with 5x10^7 DC3000 hrcC, 7hpi, 3rd replicate

text: Arabidopsis thaliana


text: Oregon State University

text: live

text: Generic

text: A. thaliana infiltrated with 10mM MgCl2, 7hpi. 1st replicate.

text: Arabidopsis thaliana


text: Oregon State University

text: live

text: Generic

text: A. thaliana infiltrated with 10mM MgCl2, 7hpi. 2nd replicate.

text: Arabidopsis thaliana


text: Oregon State University

text: live

text: Generic

text: A. thaliana infiltrated with 10mM MgCl2, 7hpi. 3rd replicate.

text: Arabidopsis thaliana


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Pisolithus microcarpus 441

text: Pisolithus microcarpus 441

characteristic: sample number

characteristic: strain

text: Generic sample from Pisolithus microcarpus


Test individuals

text: University of Stellenbosch

text: live

text: Generic

text: The RNA from the whole boby of 3 sibling individuals collected in a South African abalone farm were extracted. The mRNA was isolated and processed for the conversion in cDNA.

text: Haliotis midae

text: 3 sibling animals


Small individuals

text: University of Stellenbosch

text: live

text: Generic

text: Haliotis midae

text: 9 small animals


Big Individuals

text: University of Stellenbosch

text: live

text: Generic

text: The RNA from the whole boby of 8 sibling individuals collected in a South African abalone farm were extracted. The mRNA was isolated and processed for the conversion in cDNA. The 8 animals were of big size if compared with another group of 8 animals of the same age.

text: Haliotis midae

text: 9 Big individuals


M. charantia normalized

text: Michigan State University

text: live

text: Generic

text: Seeds of Momordica charantia collected at 18 days after pollination. Independent male flowers were used for hand pollination of female flowers. Embryos were dissected from seeds of fruits collected at specific DAP and frozen immediately in liquid nitrogen. Embryos were stored at -80°C until use in RNA isolation. Total RNA was extracted from developing bitter melon seeds was ground to a fine powder in liquid nitrogen using Trizol reagent (Invitrogen) according too the manufacturer’s protocol.mRNA were purified from 1 mg of total RNA by two passes through oligo-dT cellulose columns by use of the Illustra mRNA purification kit (GE Healthcare). cDNA libraries were constructed using SMART PCR cDNA synthesis kit (Clontech). First-strand cDNA was synthesized with 150 ng mRNA in a volume of 10 ml using the provided SMART II primer, a modified CDS III/ 3’ cDNA synthesis primer (5’-AAGCAGTGGTATCAACGCAGAGTGGCCGAGGCGGCCGACATGTTTTGTTTTTTTTTCTTTTTTTTTTVN-3’) and Superscript II reverse transcriptase (Invitrogen). Double stranded cDNA was prepared by PCR (18 cycles) using 2 ml of the first-strand reaction in a 50 ml reaction volume. Following Proteinase K treatment, four PCR reactions were pooled before SfiI digestion and size fractionated on the provided CHROMA SPIN-400 column. Only fractions containing fragments larger than 500 bp were collected, precipitated, and resuspended in TE buffer. Library normalization of this cDNA was conducted by use of Trimmer-Direct cDNA normalization kit (Evrogen). Briefly, four 250 ng aliquots of cDNA were hybridized at 98 °C for 2 min followed by 68 °C for 5 h. The hybridized cDNAs were then treated with 0, 0.25, 0.5, and 1 ml duplex-specific nuclease (DSN), respectively, before stop with the DSN stop buffer. cDNA (1 μl) from each aliquot was subjected to PCR amplification. Based on the results from the sample lacking DSN, the cycle number (9+2 cycles) was determined for the first round amplification of DSN treated samples. After examination of the cDNAs on the agarose gel, the selected aliquot of cDNAs were then diluted 10 times and subjected to a second round of PCR using 2 ml in 100 ml reaction (12 cycles). The amplified cDNA pool was then treated with proteinase K, fractionated, and precipitated for the non-normalized cDNA library construction. For the pilot study, cDNA PCR fragments were digested with SfiI enzyme and cloned into SfiIA and SfiIB sites of pDNR-LIB vector (Clontech).

text: Momordica charantia

text: Normalized cDNA library from Momordica charantia seeds


Momordica non-normalized

text: Michigan State University

text: live

text: Generic

text: Seeds of Momordica charantia collected at 18 days after pollination. Independent male flowers were used for hand pollination of female flowers. Embryos were dissected from seeds of fruits collected at specific DAP and frozen immediately in liquid nitrogen. Embryos were stored at -80°C until use in RNA isolation. Total RNA was extracted from developing bitter melon seeds was ground to a fine powder in liquid nitrogen using Trizol reagent (Invitrogen) according too the manufacturer’s protocol.mRNA were purified from 1 mg of total RNA by two passes through oligo-dT cellulose columns by use of the Illustra mRNA purification kit (GE Healthcare). cDNA libraries were constructed using SMART PCR cDNA synthesis kit (Clontech). First-strand cDNA was synthesized with 150 ng mRNA in a volume of 10 ml using the provided SMART II primer, a modified CDS III/ 3’ cDNA synthesis primer (5’-AAGCAGTGGTATCAACGCAGAGTGGCCGAGGCGGCCGACATGTTTTGTTTTTTTTTCTTTTTTTTTTVN-3’) and Superscript II reverse transcriptase (Invitrogen). Double stranded cDNA was prepared by PCR (18 cycles) using 2 ml of the first-strand reaction in a 50 ml reaction volume. Following Proteinase K treatment, four PCR reactions were pooled before SfiI digestion and size fractionated on the provided CHROMA SPIN-400 column. Only fractions containing fragments larger than 500 bp were collected, precipitated, and resuspended in TE buffer.

text: Momordica charantia

text: Non-normalized cDNA from Momordica charantia seeds


name: 1127258024035 Staphylococcus epidermidis VCU111 VCU111-BP3KB-A8NB-01-604 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus epidermidis VCU111

text: Staphylococcus epidermidis VCU111

text: Generic sample from Staphylococcus epidermidis VCU111


name: 1127258154048 Staphylococcus epidermidis VCU123 VCU123-BP3KB-A9NB-01-614 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus epidermidis VCU123

text: Staphylococcus epidermidis VCU123

text: Generic sample from Staphylococcus epidermidis VCU123


text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus aureus 21283

text: Generic sample from Staphylococcus aureus subsp. aureus 21283


name: 1127221859009 Staphylococcus epidermidis VCU081 VCU81-RLB-RL065-01-829 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus epidermidis VCU081

text: Staphylococcus epidermidis VCU081

text: Generic sample from Staphylococcus epidermidis VCU081


name: 1127257889022 Staphylococcus lugdunensis VCU139 VCU139-BP3KB-A6NB-01-616 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus lugdunensis VCU139

text: Staphylococcus lugdunensis VCU139

text: Sequencing of Staphylococcus lugdunensis VCU139


name: 1127217084110 Staphylococcus epidermidis VCU013 VCU13-RLB-RL055-01-662 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus epidermidis VCU013

text: Staphylococcus epidermidis VCU013

text: Generic sample from Staphylococcus epidermidis VCU013


name: 1127217084123 Staphylococcus epidermidis VCU041 VCU41-RLB-RL059-01-659 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus epidermidis VCU041

text: Staphylococcus epidermidis VCU041

text: Generic sample from Staphylococcus epidermidis VCU041


name: 1127217579149 Staphylococcus epidermidis VCU065 VCU65-RLB-RL063-01-653 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus epidermidis VCU065

text: Staphylococcus epidermidis VCU065

text: Generic sample from Staphylococcus epidermidis VCU065


text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus aureus 21178

text: Generic sample from Staphylococcus aureus subsp. aureus 21178


text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus aureus 21248

text: Generic sample from Staphylococcus aureus subsp. aureus 21248


text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus aureus 21195

text: Generic sample from Staphylococcus aureus subsp. aureus 21195


text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus aureus 21345

text: Generic sample from Staphylococcus aureus subsp. aureus 21345


name: 1127222374035 Staphylococcus epidermidis VCU127 VCU127-RLB-RL079-01-684 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus epidermidis VCU127

text: Staphylococcus epidermidis VCU127

text: Generic sample from Staphylococcus epidermidis VCU127


name: 1127222674048 Staphylococcus epidermidis VCU129 VCU129-RLB-RL081-01-667 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus epidermidis VCU129

text: Staphylococcus epidermidis VCU129

text: Generic sample from Staphylococcus epidermidis VCU129


text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus aureus 21281

text: Generic sample from Staphylococcus aureus subsp. aureus 21281


name: 1127222139022 Staphylococcus epidermidis VCU120 VCU120-RLB-RL075-01-745 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus epidermidis VCU120

text: Staphylococcus epidermidis VCU120

text: Generic sample from Staphylococcus epidermidis VCU120


text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus aureus 21342

text: Generic sample from Staphylococcus aureus subsp. aureus 21342


name: 1127223074016 Staphylococcus epidermidis VCU144 VCU144-RLB-RL082-01-887 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus epidermidis VCU144

text: Staphylococcus epidermidis VCU144

text: Generic sample from Staphylococcus epidermidis VCU144


text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus aureus 21286

text: Generic sample from Staphylococcus aureus subsp. aureus 21286


name: 1127217259136 Staphylococcus epidermidis VCU057 VCU57-RLB-RL062-01-944 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus epidermidis VCU057

text: Staphylococcus epidermidis VCU057

text: Generic sample from Staphylococcus epidermidis VCU057


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Synechocystis sp PCC 6803

text: Synechocystis sp. PCC 6803

text: PCC 6803

text: Generic sample from Synechocystis sp. PCC 6803


text: live

text: Generic

text: Phytophthora cinnamomi

text: Phytophthora cinnamomi

text: Generic sample from Phytophthora cinnamomi


text: live

text: Generic

text: Mycobacterium rhodesiae NBB3

text: Mycolicibacterium rhodesiae NBB3

text: Generic sample from Mycobacterium rhodesiae NBB3


text: live

text: Generic

text: Natronobacterium gregoryi SP2

text: Natronobacterium gregoryi

text: Generic sample from Natronobacterium gregoryi


text: live

text: Generic

text: Mycobacterium rhodesiae JS60

text: Mycolicibacterium rhodesiae

text: Generic sample from Mycobacterium rhodesiae


text: live

text: Generic

text: Mycobacterium chubuense NBB4

text: Mycolicibacterium chubuense

text: Generic sample from Mycobacterium chubuense


text: live

text: Generic

text: Synechococcus elongatus PCC 7942

text: Synechococcus elongatus PCC 7942 = FACHB-805

text: PCC 7942

text: Generic sample from Synechococcus elongatus PCC 7942


text: live

text: Generic

text: Desulfitobacterium dehalogenans ATCC 51507

text: ATTC 51507


text: live

text: Generic

text: Cronartium quercuum f. sp. fusiforme

text: Cronartium quercuum f. sp. fusiforme

text: f. sp. fusiforme

text: Generic sample from Cronartium quercuum f. sp. fusiforme


text: live

text: Generic

text: Methylomonas methanica MC09

text: Methylomonas methanica MC09

text: Generic sample from Methylomonas methanica MC09


text: live

text: Generic

text: Opitutaceae bacterium TAV5

text: Opitutaceae bacterium TAV5

text: Generic sample from Opitutaceae bacterium TAV5


text: live

text: Generic

text: Opitutaceae bacterium TAV1

text: Opitutaceae bacterium TAV1

text: Generic sample from Opitutaceae bacterium TAV1


text: DOE-CSP 2010

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Gram-

characteristic: Gram Staining

text: live

text: Generic

text: Free living

characteristic: biotic relationship

text: Keywords: GSC:MIGS:2.1

text: Fresh water, Host

characteristic: environment

characteristic: investigation type

text: Methanobacterium lacus

text: Methanobacterium sp. AL-21

characteristic: project name

text: Mesophile

characteristic: temperature range

text: Methanobacterium sp. AL-21, complete genome.

text: Lithotroph, Lithotroph


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Haladaptatus paucihalophilus DX253

text: Haladaptatus paucihalophilus

characteristic: organism

text: Generic sample from Haladaptatus paucihalophilus

characteristic: title


text: DOE-CSP 2010

text: Prodigal 1.4, GenePRIMP

characteristic: Gene Calling Method

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: isolated by Sorokin et al

characteristic: Isolation Comments

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Yes

characteristic: Type Strain

text: Open-ring-shaped

characteristic: cell shape

characteristic: collection date

text: USA

characteristic: country

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Water; USA, California, Lake Mono

characteristic: isolation site

text: water

characteristic: isolation-source

text: 38.012 N 118.976 W

characteristic: lat lon

text: Nonmotile

characteristic: motility

text: Thiomicrospira cyclica ALM1

text: Alkaliphile

characteristic: phenotypes

text: Thioalkalimicrobium cyclicum ALM1

text: DSM 14477, JCM 11371

text: facultative

text: Thioalkalimicrobium cyclicum ALM1, complete genome.

text: chemolithoautotroph

text: type strain of Thiomicrospira cyclica

characteristic: type material


characteristic: External Id

text: Joint Genome Institute, U.S. Department of Energy

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Thioalkalimicrobium aerophilum AL2

text: Thiomicrospira aerophila AL3

characteristic: organism

characteristic: sample number

characteristic: strain

text: Generic sample from Thioalkalimicrobium aerophilum AL3

characteristic: title


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Thioalkalivibrio thiocyanoxidans ARh 4

text: Thioalkalivibrio thiocyanoxidans ARh 4

text: ARh 4

text: Generic sample from Thioalkalivibrio thiocyanoxidans ARh 4


text: live

text: Generic

text: Burkholderiales bacterium JOSHI_001

characteristic: description

text: Burkholderiales bacterium JOSHI_001

text: Generic sample from Burkholderiales bacterium JOSHI_001


text: live

text: Generic

text: Saprospira grandis DSM 2844

text: Saprospira grandis DSM 2844

text: DSM 2844

text: Saprospira grandis DSM 2844


text: live

text: Generic

text: halophilic archeon True-ADL

text: Halohasta litchfieldiae

text: tADL

text: Generic sample from halophilic archaeon True-ADL

text: type strain of Halohasta litchfieldiae


text: live

text: Generic

text: Methanobacterium sp. SWAN-1

text: Methanobacterium paludis

text: Generic sample from Methanobacterium sp. SWAN-1

text: type strain of Methanobacterium paludis


text: live

text: Generic

text: Natrinema pellirubrum DSM 15624

text: Natrinema pellirubrum DSM 15624

text: DSM 15624

text: Generic sample from Natrinema pellirubrum DSM 15624


text: live

text: Generic

text: Halovivax ruber XH-70

text: Halovivax ruber XH-70

text: Generic sample from Halovivax ruber XH-70


text: live

text: Generic

text: Halostagnicola larsenii XH-48

text: Halostagnicola larsenii XH-48

text: Generic sample from Halostagnicola larsenii


text: live

text: Generic

text: Halopiger xanaduensis SH-6

text: Halopiger xanaduensis SH-6

text: Generic sample from Halopiger xanaduensis SH-6


text: live

text: Generic

text: Phlebia brevispora HHB-7030 SS6

text: Phlebia brevispora HHB-7030 SS6

text: HHB-7030 SS6

text: Generic sample from Phlebia brevispora HHB-7030 SS6


text: live

text: Generic

text: Amycolatopsis sp. ATCC 39116

text: Amycolatopsis sp. ATCC 39116

text: ATCC 39116

text: Generic sample from Amycolatopsis sp. ATCC 39116


text: live

text: Generic

text: Streptomyces viridosporus T7A

text: Streptomyces viridosporus T7A

text: Generic sample from Streptomyces viridosporus T7A


text: live

text: Generic

text: Thermobacillus composti KWC4

text: Thermobacillus composti KWC4

text: Generic sample from Thermobacillus composti KWC4


text: DOE Joint Genome Institute

text: live

text: Generic

text: Phaseolus vulgaris G19833

text: Phaseolus vulgaris

text: Generic sample from Phaseolus vulgaris


text: live

text: Generic

text: Mycobacterium smegmatis JS623

text: Mycolicibacterium smegmatis MC2 155

text: Generic sample from Mycobacterium smegmatis str. MC2 155


text: live

text: Generic

text: Mycobacterium tusciae JS617

text: Mycolicibacterium tusciae

text: Generic sample from Mycobacterium tusciae


text: live

text: Generic

text: Hyphomicrobium denitrificans 1NES1

text: Hyphomicrobium denitrificans 1NES1

text: Generic sample from Hyphomicrobium denitrificans 1NES1


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Halobacterium sp. DL1

text: Halobacterium sp. DL1

text: Generic sample from Halobacterium sp. DL1


text: Baylor College of Medicine

text: live

text: MIGS.ba

text: Newbler v. 2.3-042010

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

characteristic: culture-collection

text: Neisseria meningitidis strain ATCC 13091

characteristic: estimated size

text: Homo sapiens-associated habitat [ENVO:00009003]

characteristic: feature

text: Level 2: High-Quality Draft46.2x;147

characteristic: finishing strategy (depth of coverage)

text: not determined

characteristic: geo loc name

characteristic: host taxid

text: not determined

text: not determined

characteristic: lat lon

text: biological product [ENVO:02000043]

characteristic: material

text: Nasal

characteristic: misc_param: HMP body site

text: airways

characteristic: misc_param: HMP supersite

text: not determined

characteristic: nucleic acid extraction

text: not determined

text: Neisseria meningitidis ATCC 13091

text: Neisseria meningitidis ATCC 13091

characteristic: project name

text: Reference Genome

text: not determined

characteristic: sequencing method

characteristic: sop

text: ATCC 13091

text: Homo sapiens

characteristic: specific host

text: ATCC 13091

text: MIGS Cultured Bacterial/Archaeal sample from Neisseria meningitidis ATCC 13091


characteristic: External Id

text: DOE Joint Genome Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Phycomyces blakesleeanus NRRL1555 (-)

characteristic: description

text: Phycomyces blakesleeanus NRRL 1555(-)

characteristic: organism

characteristic: sample number

text: NRRL1555 (-)

characteristic: strain

text: Generic sample from Phycomyces blakesleeanus NRRL 1555(-)

characteristic: title


text: Baylor College of Medicine

text: live

text: MIGS.ba

text: Newbler v. 2.3-042010

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

characteristic: culture-collection

text: Streptococcus bovis strain ATCC 700338

characteristic: estimated size

characteristic: feature

text: Level 2: High-Quality Draft44.7x;38

characteristic: finishing strategy (depth of coverage)

text: not determined

characteristic: geo loc name

characteristic: host taxid

text: not determined

text: not determined

characteristic: lat lon

text: biological product [ENVO:02000043]

characteristic: material

text: Vaginal

characteristic: misc_param: HMP body site

characteristic: misc_param: HMP supersite

text: not determined

characteristic: nucleic acid extraction

text: not determined

text: Streptococcus equinus ATCC 700338

text: Streptococcus bovis ATCC 700338

characteristic: project name

text: Reference Genome

text: not determined

characteristic: sequencing method

text: ATCC 700338

text: Homo sapiens

text: ATCC 700338

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus bovis ATCC 700338


characteristic: External Id

text: The Salk Institute for Biological Studies

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Male C57BL/6J mice of 10 weeks old from Jackson Laboratories were entrained to a 12:12 LD cycle for 14 days and subsequently released into constant darkness. On day two in constant darkness four mice were sacrificed and liver samples were taken every three hours for 24 hours.

characteristic: description

text: Mus musculus

characteristic: organism

text: Dynamic epigenomic oscillations in differentiated cells

characteristic: title


text: Broad Institute

text: live

text: Generic

characteristic: collection date

text: Senegal

text: Red Blood Cells

characteristic: isolation source

text: Plasmodium falciparum Th230.08

text: Plasmodium falciparum Th230.08

characteristic: sample name

text: P.falciparum

characteristic: specific host

text: Senegal Th230.08

characteristic: strain

text: Generic sample from Plasmodium falciparum Th230.08


characteristic: External Id

text: Broad Institute

text: live

text: Generic

text: Plasmodium falciparum Th113.09

text: Plasmodium falciparum Th113.09

text: Senegal Th113.09

text: Generic sample from Plasmodium falciparum Th113.09


text: Broad Institute

characteristic: INSDC center name

text: live

text: Generic

text: Senegal

text: Red Blood Cells

text: Plasmodium falciparum Th231.08

text: Plasmodium falciparum Th231.08

text: P.falciparum

text: Senegal Th231.08

text: Generic sample from Plasmodium falciparum Th231.08


text: Broad Institute

characteristic: INSDC first public

text: live

text: Generic

text: Senegal

text: Red Blood Cells

text: Plasmodium falciparum Th74.08

text: Plasmodium falciparum Th74.08

text: P.falciparum

text: Senegal Th74.08

text: Generic sample from Plasmodium falciparum Th74.08


text: Broad Institute

characteristic: INSDC last update

text: live

text: Generic

text: Senegal

text: Red Blood Cells

text: Plasmodium falciparum Th15.04

text: Plasmodium falciparum Th15.04

text: P.falciparum

text: Senegal Th15.04

text: Generic sample from Plasmodium falciparum Th15.04


text: Broad Institute

characteristic: INSDC secondary accession

text: live

text: Generic

text: Plasmodium falciparum Th130.09

text: Plasmodium falciparum Th130.09

text: Senegal Th130.09

text: Generic sample from Plasmodium falciparum Th130.09


text: Broad Institute

text: live

characteristic: INSDC status

text: Generic

text: Senegal

text: Red Blood Cells

text: Plasmodium falciparum V42.05

text: Plasmodium falciparum V42.05

text: P.falciparum

text: Senegal V42.05

text: Generic sample from Plasmodium falciparum V42.05


text: Broad Institute

text: live

text: Generic

characteristic: NCBI submission model

text: Senegal

text: Red Blood Cells

text: Plasmodium falciparum P27.02

text: Plasmodium falciparum P27.02

text: P.falciparum

text: Senegal P27.02

text: Generic sample from Plasmodium falciparum P27.02


text: Broad Institute

text: live

text: Generic

characteristic: NCBI submission package

text: Senegal

text: Red Blood Cells

text: Plasmodium falciparum Th232.08

text: Plasmodium falciparum Th232.08

text: P.falciparum

text: Senegal Th232.08

text: Generic sample from Plasmodium falciparum Th232.08


text: Broad Institute

text: live

text: Generic

characteristic: SRA accession

text: Senegal

text: Red Blood Cells

text: Plasmodium falciparum Th10.04_D10

text: Plasmodium falciparum Th10.04_D10

text: P.falciparum

text: Senegal Th10.04_D10

text: Generic sample from Plasmodium falciparum Th10.04_D10


text: Broad Institute

text: live

text: Generic

text: Senegal

text: Red Blood Cells

text: Plasmodium falciparum Th105.07

text: Plasmodium falciparum Th105.07

text: P.falciparum

text: Senegal Th105.07

text: Generic sample from Plasmodium falciparum Th105.07


text: Broad Institute

text: live

text: Generic

text: Senegal

text: Red Blood Cells

text: Plasmodium falciparum P51.02

text: Plasmodium falciparum P51.02

text: P.falciparum

text: Senegal P51.02

text: Generic sample from Plasmodium falciparum P51.02


text: Broad Institute

text: live

text: Generic

text: Senegal

text: Red Blood Cells

text: Plasmodium falciparum V92.05

text: Plasmodium falciparum V92.05

text: P.falciparum

text: Senegal V92.05

text: Generic sample from Plasmodium falciparum V92.05


text: UC-Berkeley

text: live

text: Generic

text: Sir4 ChIP from S. cerevisiae/S. bayanus hybrid diploid. 565 = Sc-SIR4-13xMyc/Sb-SIR4;

characteristic: description

text: Saccharomyces bayanus

text: Sir4 hybrid ChIP sample 565


Tannery Waste

text: University of Oklahoma

text: live

text: Generic

text: soil metagenome

characteristic: organism

text: Effects of Chromium and Arsenic from tannery waste on soil microbial communities in Pakisan


text: Broad Institute

text: live

text: Generic

text: Plasmodium falciparum SenT135.09

text: Plasmodium falciparum Th135.09

text: Generic sample from Plasmodium falciparum SenT135.09

characteristic: title


text: Broad Institute

text: live

text: Generic

characteristic: isolate

text: blood

text: Oreochromis niloticus

text: female

characteristic: sex

text: Generic sample from Oreochromis niloticus


text: University of Oklahoma

text: live

text: Generic

text: soil metagenome

text: site 67 under ambient CO2


text: University of Oklahoma

text: live

text: Generic

text: soil metagenome

text: sampling from site 69 under ambient CO2


Kelp biofilm

text: University of Bergen

text: live

text: Generic

text: Bacterial biofilms on the surfaces of laminae of the kelp Laminaria hyperborea were scraped off with a scalpel. DNA was extracted followed by PCR amplification of part of the 16S rRNA gene of bacteria.

text: biofilm metagenome

text: Surface biofilm of the kelp Laminaria hyperborea


human blood

text: CEINGE Biotecnologie Avanzate

text: live

text: Generic

text: Complexively we analyzed 4 LMC patients (both at diagnosis and after therapy failure), 2 AML patients and 2 haelthy subjects

text: Homo sapiens

text: human LMC patients


text: NCBI - Transcript Shotgun Assembly

text: live

text: Generic

text: pool of blood, spleen, liver, lung and brain from one male and one female ferret

text: Mustela putorius furo

text: Ferret pooled tissues


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Holophaga foetida DSM 6591

text: Holophaga foetida DSM 6591

characteristic: sample number

text: DSM 6591

text: Generic sample from Holophaga foetida DSM 6591


text: INRA

text: live

text: Generic

text: gDNA was extracted from an asynchronous asexual population of P. falciparum 3D7, fragmented by sonication, and bisulfite converted using a commercial EpiTect Bisulfite kit. Libraries of ~200bp were sequenced on an Illumina GAII with twice 26 cycles (paired-end).

text: Plasmodium falciparum

text: 3D7 P. falciparum gDNA BS converted and fragmented at 200bp


text: INRA

text: live

text: Generic

text: gDNA was extracted from an asynchronous asexual population of P. falciparum 3D7, fragmented by sonication, and bisulfite converted using a commercial EpiTect Bisulfite kit. Libraries of ~350bp were sequenced on an Illumina GAII with twice 26 cycles (paired-end).

text: Plasmodium falciparum

text: 3D7 P. falciparum gDNA BS converted and fragmented at 350bp


text: live

text: Generic

text: Desulfitobacterium hafniense TCP-A

text: Desulfitobacterium hafniense TCP-A

text: TCP-A

text: Generic sample from Desulfitobacterium hafniense TCP-A


text: live

text: Generic

text: Davidiella tassiana CBS 121621

text: Cladosporium herbarum CBS 121621

text: CBS 121621

text: Generic sample from Davidiella tassiana CBS 121621


text: live

text: Generic

text: Porphyra umbilicalis

text: Porphyra umbilicalis

text: Generic sample from Porphyra umbilicalis


text: live

text: Generic

text: Porphyra umbilicalis

text: Porphyra umbilicalis


DENA

text: University of British Columbia

text: live

text: Generic

text: Populus trichocarpa

text: Generic sample from Populus trichocarpa


BELA

text: University of British Columbia

text: live

text: Generic

text: Populus trichocarpa

text: SNP discovery in black cottonwood (Populus trichocarpa) by population transcriptome resequencing


CNYH

text: University of British Columbia

text: live

text: Generic

text: Populus trichocarpa


VNDL

text: University of British Columbia

text: live

text: Generic

text: Populus trichocarpa


MCGR

text: University of British Columbia

text: live

text: Generic

text: Populus trichocarpa


HIXN

text: University of British Columbia

text: live

text: Generic

text: Populus trichocarpa


JASP

text: University of British Columbia

text: live

text: Generic

text: Populus trichocarpa


LONG

text: University of British Columbia

text: live

text: Generic

text: Populus trichocarpa


GLCA

text: University of British Columbia

text: live

text: Generic

text: Populus trichocarpa


ELAD

text: University of British Columbia

text: live

text: Generic

text: Populus trichocarpa


MCHB

text: University of British Columbia

text: live

text: Generic

text: Populus trichocarpa


TOBA

text: University of British Columbia

text: live

text: Generic

text: Populus trichocarpa


ALSC

text: University of British Columbia

text: live

text: Generic

text: Populus trichocarpa


TAKA

text: University of British Columbia

text: live

text: Generic

text: Populus trichocarpa


DESC

text: University of British Columbia

text: live

text: Generic

text: Populus trichocarpa


STKI

text: University of British Columbia

text: live

text: Generic

text: Populus trichocarpa


TATA

text: University of British Columbia

text: live

text: Generic

text: Populus trichocarpa


TNZA

text: University of British Columbia

text: live

text: Generic

text: Populus trichocarpa


TATB

text: University of British Columbia

text: live

text: Generic

text: Populus trichocarpa


STKG

text: University of British Columbia

text: live

text: Generic

text: Populus trichocarpa


text: live

text: Generic

text: ATCC 51935

text: Generic sample from Ectothiorhodospira haloalkaliphila ATCC 51935


text: live

text: Generic

text: Lamprocystis purpurea DSM 4197

text: Lamprocystis purpurea DSM 4197

text: DSM 4197

text: Generic sample from Lamprocystis purpurea DSM 4197


text: live

text: Generic

text: Bacillus sp. 1NLA3E

text: Bacillus sp. 1NLA3E

text: Generic sample from Bacillus sp. 1NLA3E


text: live

text: Generic

text: Mimulus laciniatus WLF47

text: Erythranthe laciniata

text: Generic sample from Mimulus laciniatus


text: live

text: Generic

text: Salix purpurea

text: Salix purpurea

text: Generic sample from Salix purpurea


text: DOE Joint Genome Institute

text: live

text: Generic

text: Mimulus guttatus CCC population

text: Erythranthe guttata

text: CCC population

text: Generic sample from Mimulus guttatus


eby

text: Hebrew University of Jerusalem

text: live

text: Generic

text: DNA extractions from the leaf surface of two T. nilotica trees in an Arid site by the Dead Sea in Israel

text: Tamarix aphylla

characteristic: host

text: phyllosphere metagenome

text: Dead Sea Arid T. nilotica phyllosphere metagenome


ebp

text: Hebrew University of Jerusalem

text: live

text: Generic

text: DNA extractions from the leaf surface of a T. aphylla tree in an Arid site by the Dead Sea in Israel

text: Tamarix aphylla

text: phyllosphere metagenome

text: Dead Sea Arid Tamarix aphylla phyllosphere


efy

text: Hebrew University of Jerusalem

text: live

text: Generic

text: DNA extractions from a T. nilotica tree in an oasis by the Dead Sea, Israel

text: Tamarix nilotica

text: phyllosphere metagenome

text: Dead Sea Oasis Tamarix nilotica phyllosphere


mmy

text: Hebrew University of Jerusalem

text: live

text: Generic

text: DNA extractions from a Tamarix nilotica tree from a site by the Mediterranean Sea, Israel

text: Tamarix nilotica

text: phyllosphere metagenome

text: Mediterranean Tamarix nilotica phyllosphere


mmm

text: Hebrew University of Jerusalem

text: live

text: Generic

text: DNA extractions from a T. tetragina in a site by the Mediterranean Sea, Israel

text: Tamarix tetragina

text: phyllosphere metagenome

text: Mediterranean Tamarix tetragina phyllosphere


mmp

text: Hebrew University of Jerusalem

text: live

text: Generic

text: DNA extractions from a Tamarix aphylla tree at a site by the Mediterranean Sea, Israel

text: Tamarix aphylla

text: phyllosphere metagenome

text: Mediterranean Tamarix aphylla phyllosphere


sbp

text: Hebrew University of Jerusalem

text: live

text: Generic

text: DNA extractions from the phyllosphere of a Tamarix aphylla tree at a site in the Negev desert, Israel

text: Tamarix aphylla

text: phyllosphere metagenome

text: Negev, Israel Tamarix aphylla phyllosphere


MV

text: Hebrew University of Jerusalem

text: live

text: Generic

text: DNA extractions from the phyllosphere of a Tamarix tree at a site in Martha's Vineyard, MA, USA

text: Tamarix

text: phyllosphere metagenome

text: Martha's Vineyard Tamarix phyllosphere


CA

text: Hebrew University of Jerusalem

text: live

text: Generic

text: DNA extractions from the phyllosphere of Tamarix aphylla trees at a site in Davis, CA, USA

text: Tamarix aphylla

text: phyllosphere metagenome

text: Davis, California Tamarix aphylla phyllosphere


name: Cucumber seed and root colonizing Oxalobacteraceae

text: ARO Volcani Center

text: live

text: Generic

text: Cucumber (Cucumis sativus cv. Kfir) were grown under greenhouse conditions in perlite and in bio-solids compost-amended perlite. Seeds and roots were sampled 1, 2, 7 and 21 days after sowing. Total DNA was extracted from the samples. DNA was subjected to 16S rDNA bacterial tag-encoded FLX amplicon pyrosequencing, performed by the Research and Testing Laboratory (Lubbock, TX) as described by Dowd et al. (2008). Amplicons originating from the 27F region numbered in relation to E. coli rRNA. Sequences retrieved were analyzed using MOTHUR (Scholss et al., 2009).

text: ecological metagenomes

text: Life strategy of seed and root colonizing Massilia (Oxalobacteraceae)


name: 1127219004486 Entamoeba histolytica HM-1:1MSS-A CLONEA-P8KB-01-646 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Entamoeba histolytica HM-1:1MSS-A

text: Entamoeba histolytica HM-1:IMSS-A

text: Generic sample from Entamoeba histolytica HM-1:IMSS-A


name: 1127307517190 Entamoeba histolytica HM-1:1MSS-B CLONEB-P8KB-01-599 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Entamoeba histolytica HM-1:1MSS-B

text: Entamoeba histolytica HM-1:IMSS-B

text: Generic sample from Entamoeba histolytica HM-1:IMSS-B


name: 1127302211071 Entamoeba histolytica DS4-868 DS04868-RL-01-831 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Entamoeba histolytica DS4-868

text: Amoebiasis

characteristic: disease

text: Homo sapiens

characteristic: host name

characteristic: host taxon id

text: Parasite isolated from diarrhea/dysentery patient. Axenic culture.

characteristic: isolation site

text: GSC:MIGS; pathogen

characteristic: keywords

text: Entamoeba histolytica DS4-868

characteristic: strain

text: Entamoeba histolytica DS4-868


characteristic: External Id

text: J. Craig Venter Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: collection date

text: Total DNA isolated from Entamoeba histolytica MS96-3382

text: Bangladesh

characteristic: geo loc name

text: Homo sapiens

text: stool from asymptomatic patient

characteristic: isolation-source

text: Entamoeba histolytica MS96-3382

text: axenic culture

characteristic: sample-type

text: Generic sample from Entamoeba histolytica MS96-3382


name: 1127322014049 Entamoeba histolytica KU27 KU27-RL-01-846 Sample

text: J. Craig Venter Institute

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Total DNA isolated from Entamoeba histolytica KU27

characteristic: description

text: Entamoeba histolytica KU27

characteristic: organism

text: Generic sample from Entamoeba histolytica KU27

characteristic: title


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Porphyra umbilicalus

text: Porphyra umbilicalis

characteristic: sample number

text: Generic sample from Porphyra umbilicalis


characteristic: External Id

text: Washington University, Genome Sequencing Center

text: live

text: Generic

text: Sample Type : genomic dna

text: Priapulus caudatus

text: Generic sample from Priapulus caudatus


text: DOE Joint Genome Institute

characteristic: INSDC center name

text: live

text: Generic

text: Mimulus guttatus OBR population

text: Erythranthe guttata

text: OBR population

characteristic: strain

text: Generic sample from Mimulus guttatus


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Baudoinia compniacensis

text: Baudoinia panamericana UAMH 10762

text: Generic sample from Baudoinia compniacensis UAMH 10762


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Aspergillus niger 11414

text: Aspergillus niger

text: Generic sample from Aspergillus niger


text: live

text: Generic

text: Pichia membranifaciens

text: Pichia membranifaciens

text: Generic sample from Pichia membranifaciens


text: live

text: Generic

text: Burkholderia B1 cenocepacia B1

text: Burkholderia cenocepacia

text: Generic sample from Burkholderia cenocepacia


text: live

text: Generic

text: Serratia sp. AS13

text: Serratia sp. AS13

text: Generic sample from Serratia sp. AS13


text: live

text: Generic

text: Phycomyces blakesleeanus L161

text: Phycomyces blakesleeanus L161

text: Generic sample from Phycomyces blakesleeanus L161


text: DOE Joint Genome Institute

text: live

text: Generic

text: Chlamydomonas reinhardtii

text: Chlamydomonas reinhardtii

text: Generic sample from Chlamydomonas reinhardtii


text: live

text: Generic

text: Phycomyces blakesleeanus A909

text: Phycomyces blakesleeanus

text: Generic sample from Phycomyces blakesleeanus


text: live

text: Generic

text: Phycomyces blakesleeanus B16

text: Phycomyces blakesleeanus B16

text: Generic sample from Phycomyces blakesleeanus B16


text: live

text: Generic

text: Phycomyces blakesleeanus A893

text: Phycomyces blakesleeanus A893

text: Generic sample from Phycomyces blakesleeanus A893


text: DOE Joint Genome Institute

text: live

text: Generic

text: Mimulus guttatus TSG3

text: Erythranthe guttata

text: Generic sample from Mimulus guttatus


text: live

text: Generic

text: Mimulus nudatus CSH18

text: Erythranthe nudata

text: Generic sample from Mimulus nudatus


text: live

text: Generic

text: Mimulus dentilobus DENT13007

text: Erythranthe dentiloba

text: Generic sample from Mimulus dentilobus


text: DOE Joint Genome Institute

text: live

text: Generic

text: Mimulus guttatus MAR3

text: Erythranthe guttata

text: Generic sample from Mimulus guttatus


text: live

text: Generic

text: Carboxydothermus ferrireducens DSM 11255

text: Carboxydothermus ferrireducens

text: DSM 11255

text: Generic sample from Carboxydothermus ferrireducens


text: DOE Joint Genome Institute

text: live

text: Generic

text: Mimulus guttatus PED5

text: Erythranthe guttata

text: Generic sample from Mimulus guttatus


text: DOE Joint Genome Institute

text: live

text: Generic

text: Mimulus guttatus YJS6

text: Erythranthe guttata

text: Generic sample from Mimulus guttatus


text: DOE Joint Genome Institute

text: live

text: Generic

text: Mimulus guttatus REM8-10

text: Erythranthe guttata

text: Generic sample from Mimulus guttatus


text: DOE Joint Genome Institute

text: live

text: Generic

text: Vibrio fischeri ES114

text: Aliivibrio fischeri ES114

text: Generic sample from Vibrio fischeri ES114


text: live

text: Generic

text: Arabidopsis arenosa Strecno

text: Arabidopsis arenosa

text: Strecno

text: Generic sample from Arabidopsis arenosa


text: DOE Joint Genome Institute

text: live

text: Generic

text: Mimulus guttatus DUN + IM62

text: Erythranthe guttata

text: DUN + IM62

text: Generic sample from Mimulus guttatus


text: NCBI-Whole Genome Shotgun Submissions

text: live

text: Generic

text: DNA from a single male (Pb1)

text: Pogonomyrmex barbatus

text: Pogonomyrmex barbatus


text: DOE Joint Genome Institute

text: live

text: Generic

text: Mimulus guttatus BOG10

text: Erythranthe guttata

text: Generic sample from Mimulus guttatus


text: live

text: Generic

text: Salix purpurea L

text: Salix purpurea

text: L

text: Generic sample from Salix purpurea


text: Virginia Bioinformatics Institute

text: live

text: Generic

text: Fragaria vesca Hawaii-4

text: Fragaria vesca f. alba

text: Fragaria vesca Hawaii-4


TK 47 pre infusion

text: German Cancer Research Center and National Center for Tumor Diseases

text: live

text: Generic

text: Homo sapiens

text: TK47 pre infusion


TK 47 post infusion

text: live

text: Generic

text: Homo sapiens

text: TK 47 post infusion


TK 38 pre infusion

text: live

text: Generic

text: Homo sapiens

text: TK 38 pre infusion


TK 38 post infusion

text: live

text: Generic

text: Homo sapiens

text: TK 38 post infusion


text: Duke University

text: live

text: Generic

text: Australian vineyard isolate. Formerly strain ARA412a (Ann Rouse).

text: Saccharomyces cerevisiae


text: Gene Expression Omnibus

text: live

text: Generic

text: hES I3 TESR-1

characteristic: batch

text: Harvard University

characteristic: biomaterial provider

text: Cell Line

characteristic: biomaterial type

text: I3 (eye three) stem cells

text: undifferentiated

characteristic: differentiation stage

text: hES I3 TESR

characteristic: line

text: embrionic stem cell

characteristic: lineage

text: TESR

characteristic: medium

text: genomic DNA

characteristic: molecule

text: Homo sapiens

characteristic: passage

text: female

characteristic: sex

text: Generic sample from Homo sapiens


characteristic: External Id

text: Gene Expression Omnibus

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Harvard University

text: Cell Line

text: Harvard University Embryonic Stem Cells

characteristic: description

text: undifferentiated

text: embrionic stem cell

text: KSR

text: genomic DNA

text: Homo sapiens

characteristic: organism

text: male

text: Generic sample from Homo sapiens

characteristic: title


text: Gene Expression Omnibus

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Cellular Dynamics

text: Cell Line

text: H1 (WA01) embryonic stem cells; NIH Approval # NIHhESC-10-0043

text: undifferentiated

text: embrionic stem cell

text: TESR

text: genomic DNA

text: Homo sapiens

text: male

text: Generic sample from Homo sapiens


text: Gene Expression Omnibus

text: live

text: Generic

text: MGH Pathology

characteristic: biomaterial provider

text: Primary Tissue

characteristic: biomaterial type

text: surgery

characteristic: collection method

text: normal adult liver

characteristic: donor id

text: genomic DNA

text: Homo sapiens

text: liver

characteristic: tissue depot

text: Adult Liver

characteristic: tissue type

text: Generic sample from Homo sapiens


characteristic: External Id

text: Gene Expression Omnibus

text: live

text: Generic

characteristic: NCBI submission model

text: MGH Pathology

text: Primary Tissue

text: surgery

text: Primary gastric smooth muscle tissue

characteristic: donor age

text: white

characteristic: donor ethnicity

text: normal smooth muscle

characteristic: donor health status

text: female

characteristic: donor sex

text: genomic DNA

characteristic: molecule

text: Homo sapiens

text: stomach

text: smooth muscle

text: Generic sample from Homo sapiens


text: Gene Expression Omnibus

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: MGH Pathology

text: Primary Tissue

text: surgery

text: Primary skeletal muscle tissue

characteristic: description

text: genomic DNA

text: Homo sapiens

characteristic: organism

text: Skeletal muscle

text: Generic sample from Homo sapiens

characteristic: title


text: Gene Expression Omnibus

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: MGH Pathology

characteristic: biomaterial provider

text: Primary Tissue

characteristic: biomaterial type

text: surgery

characteristic: collection method

text: Primary rectal smooth muscle tissue

text: white

text: normal smooth muscle

characteristic: donor id

text: female

text: genomic DNA

text: Homo sapiens

text: rectum

text: smooth muscle

text: Generic sample from Homo sapiens


characteristic: External Id

text: Gene Expression Omnibus

text: live

text: Generic

characteristic: NCBI submission model

text: MGH Pathology

text: Primary Tissue

text: surgery

text: Primary rectal mucosal tissue

characteristic: donor age

text: white

characteristic: donor ethnicity

text: normal mucosa

characteristic: donor health status

text: female

text: genomic DNA

text: Homo sapiens

text: rectum

characteristic: tissue depot

text: mucosa

characteristic: tissue type

text: Generic sample from Homo sapiens


text: Gene Expression Omnibus

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: MGH Pathology

text: Primary Tissue

text: surgery

text: Primary kidney tissue

characteristic: description

text: white

text: normal, renal cell CA (clear cell type)

text: male

characteristic: donor sex

text: genomic DNA

characteristic: molecule

text: Homo sapiens

text: kidney

text: Adult Kidney

text: Generic sample from Homo sapiens


text: Gene Expression Omnibus

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: MGH Pathology

characteristic: biomaterial provider

text: Primary Tissue

characteristic: biomaterial type

text: surgery

text: Primary rectal mucosal tissue

text: white

text: normal mucosa, diverticular disease

text: female

text: genomic DNA

text: Homo sapiens

characteristic: organism

text: rectum

text: mucosa

text: Generic sample from Homo sapiens

characteristic: title


UW DS # 12342

characteristic: External Id

text: Gene Expression Omnibus

text: live

text: Generic

characteristic: NCBI submission model

text: UW

text: Primary Cell

text: Mobilized CD34

characteristic: cell type

text: CD34 cells mobilized into peripheral blood

text: Hisp

characteristic: donor ethnicity

text: UW RO 01536

characteristic: donor id

text: female

characteristic: markers

text: genomic DNA

text: Homo sapiens

text: Mobilized CD34 Primary Cells


UW DS # 12774

text: Gene Expression Omnibus

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: UW

text: Primary Cell

text: Mobilized CD34

text: Cauc

text: UW RO 01492

text: male

text: genomic DNA

text: Homo sapiens

text: Mobilized CD34 Primary Cells


text: Gene Expression Omnibus

characteristic: INSDC last update

text: live

text: Generic

text: MGH Pathology

text: Primary Tissue

text: surgery

characteristic: collection method

text: Primary colonic mucosal tissue

characteristic: description

characteristic: donor age

text: white

text: normal mucosa, adeno. CA of Cecum

characteristic: donor health status

text: female

characteristic: donor sex

text: genomic DNA

characteristic: molecule

text: Homo sapiens

text: colon

characteristic: tissue depot

text: mucosa

characteristic: tissue type

text: Generic sample from Homo sapiens


characteristic: External Id

text: Gene Expression Omnibus

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: MGH Pathology

characteristic: biomaterial provider

text: Primary Tissue

characteristic: biomaterial type

text: surgery

text: Primary skeletal muscle tissue

text: 54 years

text: white

text: NL muscle,... Osteomylitis - BKA

text: male

text: genomic DNA

text: Homo sapiens

characteristic: organism

text: Skeletal muscle

text: Generic sample from Homo sapiens

characteristic: title


text: Gene Expression Omnibus

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: MGH Pathology

text: Primary Tissue

text: surgery

text: Primary skeletal muscle tissue

text: 72 years

text: white

characteristic: donor ethnicity

text: NL muscle,... PVD - BKA

characteristic: donor id

text: female

text: genomic DNA

text: Homo sapiens

text: Skeletal muscle

text: Generic sample from Homo sapiens


UW DS # 12771

text: Gene Expression Omnibus

text: live

text: Generic

text: UW

text: Primary Cell

text: Mobilized CD34

characteristic: cell type

characteristic: description

text: UW RO 01480

characteristic: markers

text: genomic DNA

characteristic: molecule

text: Homo sapiens

text: Generic sample from Homo sapiens


UW DS # 11872

characteristic: External Id

text: Gene Expression Omnibus

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: UW

text: Primary Tissue

text: surgery

characteristic: collection method

text: Primary fetal brain tissue

text: 122 days

characteristic: donor age

text: genomic DNA

text: Homo sapiens

text: brain

characteristic: tissue depot

text: Fetal brain

characteristic: tissue type

text: Primary fetal brain tissue