text: dbGaP

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: DNA

characteristic: analyte type

text: Geneva

characteristic: biospecimen repository

text: Yes

characteristic: is technical control

text: Homo sapiens

text: male

text: Case-Control

text: The Glaucoma Genes and Environment (GLAUGEN) Study

text: Geneva

characteristic: title


status: PUBLIC

characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

tag: attribute

text: Geneva

characteristic: biospecimen repository sample id

text: Blood

characteristic: body site

text: Cell line

characteristic: histological type

text: Yes

text: No

characteristic: is tumor

text: Homo sapiens

characteristic: organism

text: female

characteristic: sex

text: Case-Control

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

text: Geneva

characteristic: submitter handle

text: Non-tumor DNA sample from Blood of a human female participant in the dbGaP study The Glaucoma Genes and Environment (GLAUGEN) Study


text: dbGaP

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: DNA

characteristic: analyte type

text: Geneva

characteristic: biospecimen repository

text: Blood

text: Blood

text: Yes

characteristic: is technical control

text: No

text: Homo sapiens

text: female

text: Case-Control

text: Geneva

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

text: Geneva

characteristic: biospecimen repository sample id

text: Yes

text: SNP Genotypes (Array)

characteristic: molecular data type

text: Homo sapiens

text: male

text: Prospective Longitudinal Cohort

text: Geneva

text: DNA sample from a human male participant in the dbGaP study Genome-Wide associations of Lung Health Study (LHS)


text: dbGaP

text: live

text: Generic

text: DNA

text: Geneva

text: Yes

text: SNP Genotypes (Array)

text: Homo sapiens

characteristic: organism

text: male

characteristic: sex

text: Prospective Longitudinal Cohort

characteristic: study design

text: Genome-Wide associations of Lung Health Study (LHS)

characteristic: study name

text: Geneva


text: dbGaP

characteristic: INSDC last update

text: live

text: Generic

text: DNA

text: Geneva

text: Yes

text: Homo sapiens

text: female

text: Case-Control

characteristic: submitted sample id

characteristic: submitted subject id

text: Geneva

characteristic: submitter handle

text: DNA sample from a human female participant in the dbGaP study GENEVA Study of Preterm Delivery (African-American)


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

text: DNA

characteristic: analyte type

text: Geneva

characteristic: biospecimen repository

text: Yes

characteristic: is technical control

text: Homo sapiens

text: male

text: Case-Control

text: Geneva

text: DNA sample from a human male participant in the dbGaP study GENEVA Study of Preterm Delivery (African-American)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: DNA

text: Yes

text: SNP Genotypes (Array)

text: Homo sapiens

text: male

text: Case-Control

text: DNA sample from a human male participant in the dbGaP study Alcohol Dependence GWAS in European- and African Americans

characteristic: title


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

characteristic: biospecimen repository sample id

text: Yes

text: SNP Genotypes (Array)

characteristic: molecular data type

text: Homo sapiens

text: male

text: Case-Control

text: Alcohol Dependence GWAS in European- and African Americans


text: dbGaP

text: live

text: Generic

text: DNA

text: Yes

text: SNP Genotypes (Array)

text: Homo sapiens

characteristic: organism

text: female

characteristic: sex

text: Case-Control

characteristic: study design

characteristic: study name

text: DNA sample from a human female participant in the dbGaP study Alcohol Dependence GWAS in European- and African Americans


text: dbGaP

characteristic: INSDC last update

text: live

text: Generic

text: DNA

text: Geneva

text: Blood

characteristic: body site

text: Cell line

characteristic: histological type

text: Yes

text: No

characteristic: is tumor

text: SNP Genotypes (Array)

text: Homo sapiens

text: female

text: Case-Control

characteristic: submitted sample id

characteristic: submitted subject id

text: Geneva

characteristic: submitter handle

text: Non-tumor DNA sample from Blood of a human female participant in the dbGaP study Risk Assessment of Cerebrovascular Events (RACE) Study


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Generic

text: DNA

characteristic: analyte type

text: Geneva

characteristic: biospecimen repository

text: Yes

characteristic: is technical control

text: SNP Genotypes (Array)

text: Homo sapiens

text: male

text: Case-Control

text: Geneva

text: DNA sample from a human male participant in the dbGaP study Risk Assessment of Cerebrovascular Events (RACE) Study


text: Broad Institute

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Puccinia graminis f. sp. tritici 04KEN156/4

characteristic: organism

text: TTKSK

characteristic: race group

characteristic: strain

text: Generic sample from Puccinia graminis f. sp. tritici 04KEN156-4

characteristic: title


text: Broad Institute

characteristic: INSDC last update

text: live

text: Generic

text: TTKSK

text: Generic sample from Puccinia graminis f. sp. tritici Eth2010-02A


text: Broad Institute

text: live

text: Generic

text: TTKSK

text: Generic sample from Puccinia graminis f. sp. tritici 09TAN06-2


text: Broad Institute

text: live

text: Generic

text: Generic sample from Puccinia graminis f. sp. tritici 07KEN11-2


text: Broad Institute

text: live

text: Generic

text: Generic sample from Puccinia graminis f. sp. tritici Ken2009-02B


text: Broad Institute

text: live

text: Generic

text: TTKST

text: Generic sample from Puccinia graminis f. sp. tritici Eri2010-15A


text: Broad Institute

text: live

text: Generic

text: Generic sample from Puccinia graminis f. sp. tritici 09TAN10-1


text: Broad Institute

text: live

text: Generic

text: Generic sample from Puccinia graminis f. sp. tritici Ken2010-09A


text: Broad Institute

text: live

text: Generic

text: Generic sample from Puccinia graminis f. sp. tritici Eri-2010-13A


text: Broad Institute

text: live

text: Generic

text: PTKST

text: Generic sample from Puccinia graminis f. sp. tritici Ken2010-10A


text: Broad Institute

text: live

text: Generic

text: Generic sample from Puccinia graminis f. sp. tritici 09TAN8-16


text: Broad Institute

text: live

text: Generic

text: Puccinia graminis f. sp. tritici 07KEN 24-4

text: Generic sample from Puccinia graminis f. sp. tritici 07KEN24-4


text: Broad Institute

text: live

text: Generic

text: RTRJP

text: Generic sample from Puccinia graminis f. sp. tritici Ken2009-06B


text: Broad Institute

text: live

text: Generic

text: TRTTF

text: Generic sample from Puccinia graminis f. sp. tritici Eth2010-01A


text: Broad Institute

text: live

text: Generic

text: RKBJ

text: Generic sample from Puccinia graminis f. sp. tritici 96ZIM2A


text: Broad Institute

text: live

text: Generic

text: GBCS

text: Generic sample from Puccinia graminis f. sp. tritici 83ETH6-1


text: Broad Institute

text: live

text: Generic

text: JCMQ

text: Generic sample from Puccinia graminis f. sp. tritici 87KEN11-4


text: Broad Institute

text: live

text: Generic

text: TKRJ

text: Generic sample from Puccinia graminis f. sp. tritici 83KEN7A


text: Broad Institute

text: live

text: Generic

text: Generic sample from Puccinia graminis f. sp. tritici 85MAR42-2


text: Broad Institute

text: live

text: Generic

text: Generic sample from Puccinia graminis f. sp. tritici 80MAR33B


text: Broad Institute

text: live

text: Generic

text: RRRT

text: Generic sample from Puccinia graminis f. sp. tritici 86PAK1030A


text: Broad Institute

text: live

text: Generic

text: GHCS

text: Generic sample from Puccinia graminis f. sp. tritici 86ITA1042A


text: Broad Institute

text: live

text: Generic

text: JRCQC

text: Generic sample from Puccinia graminis f. sp. tritici 09ETH8-3


text: Broad Institute

text: live

text: Generic

text: HPCS

text: Generic sample from Puccinia graminis f. sp. tritici 60IRN10B


text: Broad Institute

text: live

text: Generic

text: Generic sample from Puccinia graminis f. sp. tritici 72ETH11-4


text: Broad Institute

text: live

text: Generic

text: Generic sample from Puccinia graminis f. sp. tritici 84CSK759C


text: Broad Institute

text: live

text: Generic

text: Generic sample from Puccinia graminis f. sp. tritici 84ETH19A


text: Broad Institute

text: live

text: Generic

text: Generic sample from Puccinia graminis f. sp. tritici ISR2147


text: Broad Institute

text: live

text: Generic

text: Generic sample from Puccinia graminis f. sp. tritici ISR2164


text: Broad Institute

text: live

text: Generic

text: Generic sample from Puccinia graminis f. sp. tritici 87KEN3018-4


text: Broad Institute

text: live

text: Generic

text: Generic sample from Puccinia graminis f. sp. tritici 84KEN8C


text: Broad Institute

text: live

text: Generic

text: Generic sample from Puccinia graminis f. sp. tritici 84KEN8B


text: Broad Institute

text: live

text: Generic

text: Generic sample from Puccinia graminis f. sp. tritici 83ETH6-2-2


text: Broad Institute

text: live

text: Generic

text: Generic sample from Puccinia graminis f. sp. tritici 84CSK764-3


text: Broad Institute

text: live

text: Generic

text: Generic sample from Puccinia graminis f. sp. tritici 86MAR185C


Puccinia graminis f. sp. tritici 59KS19

text: Broad Institute

text: live

text: Generic

text: Puccinia graminis f. sp. tritici 59KS19

text: MCCF

text: Generic sample from Puccinia graminis f. sp. tritici 59KS19


text: Broad Institute

text: live

text: Generic

text: QFCS

text: Generic sample from Puccinia graminis f. sp. tritici 06ND76C


text: Broad Institute

text: live

text: Generic

text: RCRS

text: Generic sample from Puccinia graminis f. sp. tritici 77ND82A


text: Broad Institute

text: live

text: Generic

text: RKQQ

text: Generic sample from Puccinia graminis f. sp. tritici 99KS76A


text: Broad Institute

text: live

text: Generic

text: TPMK

text: Generic sample from Puccinia graminis f. sp. tritici 74MN1409


text: Broad Institute

text: live

text: Generic

text: TTTT

text: Generic sample from Puccinia graminis f. sp. tritici 01MN84A1-2


text: Broad Institute

text: live

text: Generic

text: QCCJ

text: Generic sample from Puccinia graminis f. sp. tritici 01SD80A


text: Broad Institute

text: live

text: Generic

text: RHTS

text: Generic sample from Puccinia graminis f. sp. tritici 75MN68C


Puccinia graminis f. sp. tritici 59OH5B

text: Broad Institute

text: live

text: Generic

text: Puccinia graminis f. sp. tritici 59OH5B

text: QCCG

text: Generic sample from Puccinia graminis f. sp. tritici 59OH5B


text: Broad Institute

text: live

text: Generic

text: MCCD

text: Generic sample from Puccinia graminis f. sp. tritici 71MN603-2


text: Broad Institute

text: live

text: Generic

text: TPLK

text: Generic sample from Puccinia graminis f. sp. tritici 86SD656B


Puccinia graminis f. sp. tritici 65SD2

text: Broad Institute

text: live

text: Generic

text: Puccinia graminis f. sp. tritici 65SD2

text: TMLK

text: Generic sample from Puccinia graminis f. sp. tritici 65SD2


text: Broad Institute

text: live

text: Generic

text: RCRS

text: Generic sample from Puccinia graminis f. sp. tritici 56SD37B


text: Broad Institute

text: live

text: Generic

text: Generic sample from Puccinia graminis f. sp. tritici 75WA165-2A


SyRef

text: Harvard University

text: live

text: Generic

text: Urban, 1906

characteristic: authority

characteristic: collection date

text: Canada

characteristic: geo loc name

text: Marine

characteristic: isolation-source

text: SyRef

characteristic: label

text: Sycon coactum

text: hermaphrodite

characteristic: sex

text: whole

characteristic: tissue-type

text: General Sample for Sycon coactum


PeRef

characteristic: External Id

text: Harvard University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Generic

text: (Poiret, 1789)

text: Mediterranean Sea

text: PeRef

text: Petrosia ficiformis

text: whole organism

characteristic: sample-type

text: female

characteristic: specimen-voucher

text: General Sample for Petrosia ficiformis (taxid:68564)


text: Harvard University

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Schmidt, 1862

text: Reproductive

characteristic: dev-stage

text: Mediterranean

text: Corticium candelabrum

characteristic: organism

text: whole organism

text: Hermaprhodite

text: General Sample for Corticium candelabrum (taxid:121492)


text: Cornell University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: Mus musculus

text: Mouse Chaos3 Mammary Tumor Cell Line

characteristic: title


text: Cornell University

text: live

text: Generic

text: Mus musculus

text: Mouse Chaos3 Mammary Tumor


text: Cornell University

text: live

text: Generic

text: Mus musculus

text: Mouse C3H


Morex Barley Genome

text: University of California, Riverside

text: live

text: Generic

text: Hordeum vulgare subsp. vulgare

text: Shotgun Sequence Assembly of Morex Barley Genome


text: Harvard Medical School, Department of Genetics

text: live

text: Generic

text: Homo sapiens

text: HapMap NA21106 17q21.31 capture sequence


text: live

text: Generic

text: Homo sapiens


text: University of California, Davis

text: live

text: Generic

text: Low coverage whole genome shotgun PacBio (C2 beta version chemistry) of switchgrass (Panicum virgatum AP13)

characteristic: description

text: Panicum virgatum

text: Whole genome shotgun PacBio sequencing Panicum virgatum (AP13)


text: live

text: Generic

text: Homo sapiens

text: 17q21.31 sequence capture NA21137


text: live

text: Generic

text: Homo sapiens

text: 17q21.31 sequence capture NA20770


text: live

text: Generic

text: Homo sapiens

text: 17q21.31 sequence capture NA20768


text: live

text: Generic

text: Homo sapiens

text: 17q21.31 sequence capture NA20890


text: live

text: Generic

text: Homo sapiens

text: 17q21.31 sequence capture NA11894


text: Carnegie Mellon University

text: live

text: Generic

text: Genomic DNA was prepared from adult female flies. Illumina gDNA sequencing libraries were prepared using the Illumina paired-end library preparation kit. Libraries were sequenced on an Illumina GAIIx with two cycles of 76 base sequencing.

text: Drosophila melanogaster

text: Drosophila melanogaster gDNA. Illumina 2x76


text: Carnegie Mellon University

text: live

text: Generic

text: Genomic DNA was prepared from adult female flies. Illumina sequencing libraries were prepared using the Illumina paired-end library preparation kit. Libraries were sequenced on an Illumina GAIIx using two 76 cycle reactions

text: Drosophila melanogaster


text: Carnegie Mellon University

text: live

text: Generic

text: Genomic DNA was prepared from adult female D. melanogaster. Illumina sequencing libraries were prepared using the Illumina paired-end library preparation kit according to manufacturer protocol. Libraries were sequenced on an Illumina GAIIx using the single read 76 cycle protocol.

text: Drosophila melanogaster

text: Drosophila melanogaster gDNA. Illumina 1x76


text: Carnegie Mellon University

text: live

text: Generic

text: Total RNA was prepared from F1 females resulting from a cross of zhr (Metropolitan type) strain females to z30 (African Z type) males. cDNA sequencing libraries were prepared from oligo-dT enriched mRNA. Sequencing was performed on an Illumina GAIIx using 2 x 76 base cycles.

text: Drosophila melanogaster

text: Drosophila melanogaster F1 cross mRNA sequencing data (MZ)


text: Carnegie Mellon University

text: live

text: Generic

text: Total RNA was prepared from F1 females resulting from a cross of z30 (African Z type) strain females to zhr (M-type) males. cDNA sequencing libraries were prepared from oligo-dT enriched mRNA. Sequencing was performed on an Illumina GAIIx using 2 x 76 base cycles.

text: Drosophila melanogaster

text: Drosophila melanogaster ZM mRNA. Illumina 2 x 76


name: Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000222

text: fish

characteristic: IFSAC Category

text: Food and Drug Administration, Center for Food Safety and Applied Nutrition

text: live

text: Pathogen.env

text: Generic

characteristic: biosamplemodel

characteristic: fda lab id

text: pabda fish

characteristic: isolation source

text: pabda fish:FOODON_00002725

characteristic: ontological term

text: Bareilly

characteristic: serovar

text: Food

characteristic: source type

characteristic: strain

text: enterica

characteristic: sub species


name: Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000219

characteristic: External Id

text: other (flavoring or seasoning)

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Generic

text: organic black pepper

text: black pepper plant:FOODON_03411191

text: Bareilly

text: Food

text: enterica


Control M. cavernosa viral cDNA library

text: Oregon State University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: Virus-like sequences isolated and concentrated from the tissues of Montastraea cavernosa and its resident microbial symbionts under control (28.0*C for 12 hours) conditions.

text: Montastraea cavernosa

characteristic: organism

text: Metagenomic evidence of unique nucleocytoplasmic dsDNA and ssRNA viruses associated with the dinoflagellate algal endosymbionts of corals

characteristic: title


name: Heat Stressed M. cavernosa viral cDNA library

text: Oregon State University

text: live

text: Generic

text: Virus-like sequences isolated and concentrated from the tissues of Montastraea cavernosa and its resident microbial symbionts under heat stress (31.5*C for 12 hours) conditions.

characteristic: description

text: Montastraea cavernosa


name: Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000223

text: fish

characteristic: IFSAC Category

text: live

text: Pathogen.env

text: Generic

characteristic: biosamplemodel

characteristic: fda lab id

text: frozen rohu fish

characteristic: isolation source

text: fish (frozen):FOODON_03301083, rohu:FOODON_03413469

characteristic: ontological term

text: Bareilly

text: Food

text: enterica


characteristic: External Id

text: Biochemistry, University of Giessen

text: live

text: Generic

text: HeLa

characteristic: cell line

text: Anti-hnRNP-L

characteristic: chip antibody

text: Sigma-Aldrich

characteristic: chip antibody manufacturer

text: Homo sapiens

text: HeLa

text: iCLIP experiment with hnRNPL antibody, biological repl. 1


text: Biochemistry, University of Giessen

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: HeLa

text: Anti-hnRNP-L

text: Sigma-Aldrich

text: Homo sapiens

text: HeLa

text: iCLIP experiment with hnRNPL antibody, biological repl. 2


text: Biochemistry, University of Giessen

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: HeLa

text: Anti-hnRNP-L

text: Sigma-Aldrich

text: Homo sapiens

text: HeLa

text: iCLIP experiment with hnRNPL antibody, biological repl. 3


text: Biochemistry, University of Giessen

text: live

text: Generic

text: HeLa

text: ANTI-FLAG M2

text: Sigma-Aldrich

text: Homo sapiens

characteristic: organism

text: HeLa

text: iCLIP experiment with FLAG antibody, biological repl. 1

characteristic: title


text: Biochemistry, University of Giessen

text: live

text: Generic

text: HeLa

text: ANTI-FLAG M2

text: Sigma-Aldrich

text: Homo sapiens

text: HeLa

text: iCLIP experiment with FLAG antibody, biological repl. 2


text: Biochemistry, University of Giessen

text: live

text: Generic

text: HeLa

text: ANTI-FLAG M2

text: Sigma-Aldrich

text: Homo sapiens

text: HeLa

text: iCLIP experiment with FLAG antibody, biological repl. 3


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Pleurotus ostreatus PC9

characteristic: description

text: Pleurotus ostreatus PC9

characteristic: sample number

characteristic: strain

text: Generic sample from Pleurotus ostreatus


PRJNA175043.Cuomo Pooling

characteristic: External Id

text: Broad Institute

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: Coniosporium apollinis CBS 100218

text: Cuomo Pooling

characteristic: sample name

text: Generic sample from Coniosporium apollinis CBS 100218


longissimus muscles

text: Nanjing Agricultural University

text: live

text: Generic

text: Porcine longissimus muscles were pooled from 18 developmental stages (33-, 40-, 45-, 50-, 55-, 60-, 65-, 70-, 75-, 80-, 85-, 90-, 95-, 100- and 105-day post-gestation fetuses, 0 and 10-day postnatal piglets and adult pigs).

text: Sus scrofa domesticus

text: Discovery of microRNAs Associated with Myogenesis by Deep Sequencing of Serial Developmental Skeletal Muscles in Pigs


text: Centro de Investigacion sobre Enfermedades Infecciosas. Instituto Nacional de Salud Publica

text: live

text: Generic

text: Total RNA was extracted from dorsal vessels dissected 18 hours post-inoculation with saline. 3-5 day post-emerged female mosquitoes.

text: Anopheles albimanus

text: Dorsal vessel of control mosquitoes (Not challenged with Zymosan)


text: live

text: Generic

text: Total RNA was extracted from dorsal vessels dissected 18 hours post-inoculation with Zymosan. 3-5 day post-emerged female mosquitoes.

text: Anopheles albimanus

text: Dorsal vessel of control mosquitoes (Challenged with Zymosan)


Abd

text: live

text: Generic

text: Total RNA was extracted from dissected abdominal cuticle and fat body of 3-5 day post-emerged female mosquitoes.

text: Anopheles albimanus

text: Abdominal cuticle/fat body


text: live

text: Generic

text: Total RNA was extracted from dissected midguts of 7 day post-infective blood meal with P. vivax VK210 infected blood.

text: Anopheles albimanus

text: Midgut. 7 days Post-infective blood meal. P. vivax VK210


text: live

text: Generic

text: Total RNA was extracted from dissected midguts of 7 day post-infective blood meal with P. vivax VK247 infected blood.

text: Anopheles albimanus

text: Midgut. 7 days Post-infective blood meal. P. vivax VK247


text: live

text: Generic

text: Total RNA was extracted from dissected midguts of 24 hr post-infective blood meal with P. vivax VK210 infected blood.

text: Anopheles albimanus

text: Midgut. 24 hr Post-infective blood meal. P. vivax VK210


text: live

text: Generic

text: Total RNA was extracted from dissected midguts of 24 hr post-infective blood meal with P. vivax VK247 infected blood.

text: Anopheles albimanus

text: Midgut. 24 hr Post-infective blood meal. P. vivax VK247


text: Cornell University

text: live

text: Generic

text: Wild type

text: Mus musculus

text: Partial Exome Resequencing of Mouse Chaos3 Mammary Tumor


text: Cornell University

text: live

text: Generic

text: Mus musculus


text: Cornell University

text: live

text: Generic

text: Chaos3 Mammary Tumor

text: Mus musculus


text: Cancer Epigenetics, PEBC, IDIBELL

text: live

text: Generic

text: EBV immortalized B cells

characteristic: cell type

text: healthy

characteristic: disease status

text: Homo sapiens

text: Blood, healthy control

text: blood

characteristic: tissue

text: Healthy control


text: Cancer Epigenetics, PEBC, IDIBELL

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Generic

text: EBV immortalized B cells

text: immunodeficiency, centromere instability and facial anomalies (ICF) syndrome

text: Homo sapiens

text: Blood, ICF patient

text: blood

text: ICF patient


text: Peking University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

text: human preimplantation blastomere

text: early blastomere

characteristic: developmental stage

text: Homo sapiens

text: 4-cell embryo#1

text: human preimplantation embryos

text: 4-cell embryo#1 -Cell#1


text: Peking University

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: human preimplantation blastomere

text: early blastomere

text: Homo sapiens

characteristic: organism

text: 4-cell embryo#1

text: human preimplantation embryos

text: 4-cell embryo#1 -Cell#2

characteristic: title


characteristic: External Id

text: Peking University

text: live

text: Generic

text: human preimplantation blastomere

text: early blastomere

text: Homo sapiens

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text: hESC passage#10

text: human embryonic stem cell line

text: hESC passage#10 -Cell#25


text: Peking University

text: live

text: Generic

text: human embryonic stem cell

text: peri-implantation stem cells

text: Homo sapiens

text: hESC passage#10

text: human embryonic stem cell line

text: hESC passage#10 -Cell#26


text: Institute for Genome Sciences University of MD School of Medicine

text: live

text: Generic

text: Vibrio cholerae O1 str. NHCC-008D

characteristic: strain

text: Vibrio cholerae NHCC-008D


text: live

text: Generic

text: Vibrio cholerae O1 str. NHCC-004A

text: Vibrio cholerae NHCC-004A


text: Washington University, Genome Sequencing Center

text: live

text: Generic

characteristic: sample id

characteristic: sample name

text: genomic dna

characteristic: sample type

text: Bosnia A

text: Generic sample from Treponema pallidum subsp. endemicum str. Bosnia A


text: live

text: Generic

text: Treponema pallidum subsp. endemicum str. Bosnia A

text: genomic dna

text: Bosnia A


Kabuli-type chickpea (ICCV2)

text: National Institute of Plant Genome Research (NIPGR)

text: live

text: Generic

text: Mixed RNA from different tissue samples of chickpea (ICCV2) were used for transcriptome sequencing on Roche 454 platform

characteristic: description

text: Cicer arietinum

text: Chickpea (ICCV2) transcriptome sequencing


characteristic: INSDC center name

text: live

text: Generic

text: Vibrio cholerae O1 str. EM-1536

text: Vibrio cholerae EM-1536


characteristic: INSDC first public

text: live

text: Generic

text: Vibrio cholerae O1 str. AG-7404

text: Vibrio cholerae AG-7404


text: NIEHS/NIH

text: live

characteristic: INSDC status

text: Generic

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM11994

characteristic: biomaterial provider

characteristic: cell line

text: lymphoblastoid

characteristic: cell type

text: rabbit monoclonal anti-NRF2 (Epitomics, Clone ID EP1808Y)

characteristic: chip antibody

text: Homo sapiens

text: NRF2 ChIP SFN treated

text: NRF2 ChIP SFN treated pilot


text: NIEHS/NIH

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM11992

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM12763

text: GM11992, GM12763

text: lymphoblastoid

text: Homo sapiens

text: NRF2 ChIP SFN treated

text: NRF2 ChIP SFN treated rep1


characteristic: External Id

text: NIEHS/NIH

text: live

text: Generic

characteristic: SRA accession

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM06993

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM12872

text: GM06993, GM12872

text: lymphoblastoid

text: Homo sapiens

characteristic: organism

text: NRF2 ChIP SFN treated

text: NRF2 ChIP SFN treated rep2

characteristic: title


text: NIEHS/NIH

text: live

text: Generic

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM07000

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM11882

text: GM07000, GM11882

text: lymphoblastoid

text: Homo sapiens

text: NRF2 ChIP SFN treated

text: NRF2 ChIP SFN treated rep3


text: NIEHS/NIH

text: live

text: Generic

text: lymphoblastoid

text: Homo sapiens

text: NRF2 ChIP vehicle treated

text: NRF2 ChIP vehicle treated pilot


text: NIEHS/NIH

text: live

text: Generic

text: GM11992, GM12763

text: lymphoblastoid

text: Homo sapiens

text: NRF2 ChIP vehicle treated

text: NRF2 ChIP vehicle treated rep1


text: NIEHS/NIH

text: live

text: Generic

text: GM06993, GM12872

text: lymphoblastoid

text: Homo sapiens

text: NRF2 ChIP vehicle treated

text: NRF2 ChIP vehicle treated rep2


text: NIEHS/NIH

text: live

text: Generic

text: GM07000, GM11882

text: lymphoblastoid

text: Homo sapiens

text: NRF2 ChIP vehicle treated

text: NRF2 ChIP vehicle treated rep3


text: NIEHS/NIH

text: live

text: Generic

text: GM06993, GM07000, GM11882, GM11992, GM12763, GM12872

text: lymphoblastoid

text: rabbit IgG antibody (Invitrogen)

text: Homo sapiens

text: IgG ChIP SFN treated

text: IgG ChIP SFN treated


text: NIEHS/NIH

text: live

text: Generic

text: lymphoblastoid

text: rabbit IgG antibody (Invitrogen)

text: Homo sapiens

text: IgG ChIP vehicle treated

text: IgG ChIP vehicle treated


text: NIEHS/NIH

text: live

text: Generic

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM12878

text: lymphoblastoid

text: Homo sapiens

text: input SFN treated

text: input SFN treated


text: NIEHS/NIH

text: live

text: Generic

text: lymphoblastoid

text: Homo sapiens

text: input vehicle treated

text: input vehicle treated


text: Institute for Genome Sciences University of MD School of Medicine

text: live

text: Generic

text: Vibrio cholerae O1 str. AG-8040

characteristic: strain

text: Vibrio cholerae AG-8040


text: live

text: Generic

text: Vibrio cholerae O1 str. EM-1626

text: Vibrio cholerae EM-1626


text: live

text: Generic

text: Vibrio cholerae O1 str. EC-0051

text: Vibrio cholerae EC-0051


text: live

text: Generic

text: Vibrio cholerae O1 str. EM-1546

text: Vibrio cholerae EM-1546


text: live

text: Generic

text: Vibrio paracholerae 87395

text: Vibrio cholerae 87395


text: live

text: Generic

text: Vibrio cholerae O1 str. 95412

text: Vibrio cholerae 95412


text: live

text: Generic

text: Vibrio cholerae O1 str. 116059

text: Vibrio cholerae 116059


text: live

text: Generic

text: Vibrio cholerae O1 str. PCS-023

text: Vibrio cholerae PCS-023


text: live

text: Generic

text: Vibrio cholerae O1 str. EC-0009

text: Vibrio cholerae EC-0009


text: live

text: Generic

text: Vibrio cholerae O1 str. NHCC-006C

text: Vibrio cholerae NHCC-006C


text: live

text: Generic

text: Vibrio cholerae O1 str. Nep-21113

text: Vibrio cholerae Nep-21113


text: live

text: Generic

text: Vibrio cholerae O1 str. Nep-21106

text: Vibrio cholerae Nep-21106


text: live

text: Generic

text: Vibrio cholerae O1 str. 116063

text: Vibrio cholerae 116063


text: live

text: Generic

text: Vibrio cholerae O1 str. NHCC-010F

text: Vibrio cholerae NHCC-010F


text: live

text: Generic

text: Vibrio cholerae O1 str. EDC-022

text: Vibrio cholerae EDC-022


text: live

text: Generic

text: Vibrio cholerae O1 str. EC-0027

text: Vibrio cholerae EC-0027


text: live

text: Generic

text: Vibrio cholerae O1 str. EDC-020

text: Vibrio cholerae EDC-020


text: University of Illinois

text: live

text: Generic

text: See Comparative Metagenomics Reveals Host Specific Metavirulomes and Horizontal Gene Transfer Elements in the Chicken Cecum Microbiome by Qu et Al. PLOS ONE 3(8). 2008.

characteristic: description

text: chicken gut metagenome

text: Chicken caecum


text: University of Illinois

characteristic: INSDC center name

text: live

text: Generic

text: See Brulc JM, et al. (2009) Gene-centric metagenomics of the fiber-adherent bovine rumen microbiome reveals forage specific glycoside hydrolases. Proc. Natl. Acad. Sci. USA 106:1948-1953.

text: bovine gut metagenome

text: Microbiome of the cattle rumen


pig

text: University of Illinois

characteristic: INSDC first public

text: live

text: Generic

text: The Duroc sow (2-14; TJ Tabasco) was used as the genomic template for producing cloned animals using somatic cell nuclear transfer. Tabasco was used to produce the CHORI 242 BAC library which was used to generate the full pig genome sequence (65). The clones were born by vaginal delivery and allowed to suckle. They were weaned at 4 weeks of age and continuously housed together. They were not vaccinated or ever in contact with other pigs after weaning. Pigs were fed once daily in the morning and had free access to water. Fecal samples were collected on day 14 (the last day of that feed rotation) of each diet for a total of 4 samples for each animal. Samples were collected from the rectum into a sterile tube and frozen at -80 C until time of analysis.

text: gut metagenome

text: Microbiome sampled from the pig feces


Dandi_Shoot control

text: Anand Agricultural University

text: live

characteristic: INSDC status

text: Generic

text: Oryza sativa Indica Group

text: Dandi shoot (control)


Dandi_Root control

text: Anand Agricultural University

text: live

text: Generic

text: Oryza sativa Indica Group

text: Dandi root (control)


GR-11_Shoot control

text: Anand Agricultural University

text: live

text: Generic

text: Oryza sativa Indica Group

text: GR-11 shoot (control)


GR-11_Root control

text: Anand Agricultural University

text: live

text: Generic

text: Oryza sativa Indica Group

text: GR-11 root (control)


Transcriptome sequencing for T. granosa

text: Zhejiang Wanli University

text: live

text: Generic

text: Tissue samples, including adductor muscle, digestive gland, mantle and gill, were dissected from fifteen adult T. granosa. Larvae of the two major developmental stages (trochophore and D-shaped larvae) and one-month-old juvenile were sampled. All samples were snap frozen in liquid nitrogen and stored at -85? until use. Total RNA was extracted from 7 samples using the method according to Hu et al(2006). Seven 454 libraries were constructed through the steps of cDNA synthesis and amplification, fragmentation and size selection, and adaptor ligation and amplification as described by Hou et al(2011). A barcode system was used to discriminate samples from different libraries. Finally, 7 libraries were mixed into a single pool. More than 5 µg of the mixed cDNA pool was conducted for high throughput sequencing using Roche Genome Sequencer FLX titanium platform (Roche, CT, USA) by Tongji- SCBIT Biotechnology Co. Ltd (Shanghai, China).

text: Tegillarca granosa

text: cDNA from larvae, juvenile and adult tissues of T. granosa


text: ENCODE DCC

text: live

text: Generic

text: ATCC

characteristic: biomaterial provider

characteristic: cell

text: leukemia, The continuous cell line K-562 was established by Lozzio and Lozzio from the pleural effusion of a 53-year-old female with chronic myelogenous leukemia in terminal blast crises. - ATCC

characteristic: cell description

text: cancer

characteristic: cell karyotype

text: mesoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: F

characteristic: cell sex

text: RnaSeq

characteristic: datatype

text: Sequencing analysis of RNA expression

characteristic: datatype description

text: Yale

characteristic: lab

text: Snyder - Yale University

characteristic: lab description

text: Homo sapiens

text: polyA

characteristic: rnaextract

text: Isolated Poly(A) RNA

characteristic: rnaextract description

characteristic: treatment

text: 30 m of Interferon alpha (Snyder)

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: ATCC

text: cancer

text: mesoderm

text: human

text: F

text: RnaSeq

text: Sequencing analysis of RNA expression

text: Yale

text: Snyder - Yale University

text: Homo sapiens

characteristic: organism

text: polyA

text: Isolated Poly(A) RNA

characteristic: title

text: Interferon alpha treatment - 6 hours (Snyder)


text: ENCODE DCC

text: live

characteristic: INSDC status

text: Generic

text: ATCC

characteristic: biomaterial provider

characteristic: cell

characteristic: cell description

text: cancer

characteristic: cell karyotype

text: mesoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: F

characteristic: cell sex

text: RnaSeq

characteristic: datatype

text: Sequencing analysis of RNA expression

characteristic: datatype description

text: Yale

text: Snyder - Yale University

text: Homo sapiens

text: polyA

text: Isolated Poly(A) RNA

text: Interferon gamma treatment - 30 minutes (Snyder)


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: ATCC

text: cancer

text: mesoderm

text: human

text: F

text: RnaSeq

text: Sequencing analysis of RNA expression

text: Yale

characteristic: lab

text: Snyder - Yale University

characteristic: lab description

text: Homo sapiens

text: polyA

characteristic: rnaextract

text: Isolated Poly(A) RNA

characteristic: rnaextract description

characteristic: treatment

text: Interferon gamma treatment - 6 hours (Snyder)

characteristic: treatment description


RNA-seqShoot

text: China Argricultural University

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Zea mays

characteristic: organism

text: RNA-seq data from 12-d-old shoot in maize B73 inbred line

characteristic: title


characteristic: External Id

text: China Argricultural University

text: live

text: Generic

text: Zea mays

text: RNA-seq data from 12 DAP embryo in maize B73 inbred line


ANRILoverexpression

text: University Leipzig

characteristic: INSDC center name

text: live

text: Generic

text: Homo sapiens

text: ANRIL over-expressing human cell line


vectorcontrol

text: University Leipzig

characteristic: INSDC first public

text: live

text: Generic

text: Homo sapiens

text: Vector control


text: University of Nebraska - Non Human Primate Genomics Center

characteristic: INSDC last update

text: live

text: Generic

text: Genomic DNA was extracted from a male, Chinese-origin rhesus macaque (animal 002T-NHP) at the University of Nebraska Medical Center.

characteristic: description

text: Macaca mulatta

text: Rhesus macaque (animal 002T-NHP)


text: Leiden Genome Technology Center, Human Genetics, Leiden University Medical Center

text: live

text: Generic

text: Homo sapiens

text: renal

text: non-tumoral renal cortex

characteristic: tissue

text: NRC 30K1R_s5_AAGCCC

text: NRC

characteristic: tumor group


text: live

text: Generic

text: Homo sapiens

text: renal

text: non-tumoral renal cortex

text: NRC 30K1R_s5_CCCCTT

text: NRC


text: live

text: Generic

text: Homo sapiens

text: renal

text: non-tumoral renal cortex

text: NRC 42T2V_s1_AAGCCC

text: NRC


text: live

text: Generic

text: Homo sapiens

text: renal

text: non-tumoral renal cortex

text: NRC 42T2V_s1_CCCCTT

text: NRC


text: live

text: Generic

text: Homo sapiens

text: renal

text: non-tumoral renal cortex

text: NRC 42T2V_s2_AAGCCC

text: NRC


text: live

text: Generic

text: Homo sapiens

text: renal

text: non-tumoral renal cortex

text: NRC 42T2V_s2_CCCCTT

text: NRC


text: live

text: Generic

text: Homo sapiens

text: renal

text: non-tumoral renal cortex

text: NRC 42T2Y_s5_AAGCCC

text: NRC


text: live

text: Generic

text: Homo sapiens

text: renal

text: non-tumoral renal cortex

text: NRC 42T2Y_s5_CCCCTT

text: NRC


text: live

text: Generic

text: Homo sapiens

text: renal

text: non-tumoral renal cortex

text: NRC 42T2Y_s5_TCGTTG

text: NRC


text: live

text: Generic

text: Homo sapiens

text: renal

text: non-tumoral renal cortex

text: NRC 42T2Y_s6_CACACC

text: NRC


text: live

text: Generic

text: Homo sapiens

text: renal

text: non-tumoral renal cortex

text: NRC 42T2Y_s6_CATCGG

text: NRC


text: live

text: Generic

text: clear cell renal cell carcinoma recurrence

characteristic: disease state

text: Homo sapiens

text: renal

text: clear cell renal cell carcinoma

text: RCC recurrence 30K1R_s5_CATCGG

text: RCC recurrence


text: live

text: Generic

text: Homo sapiens

text: renal

text: clear cell renal cell carcinoma

text: RCC recurrence 30K1R_s5_TCGTTG

text: RCC recurrence


text: live

text: Generic

text: Homo sapiens

text: renal

text: clear cell renal cell carcinoma

text: RCC recurrence 42T2V_s1_CACACC

text: RCC recurrence


text: live

text: Generic

text: Homo sapiens

text: renal

text: clear cell renal cell carcinoma

text: RCC recurrence 42T2Y_s6_AAGCCC

text: RCC recurrence


text: live

text: Generic

text: Homo sapiens

text: renal

text: clear cell renal cell carcinoma

text: RCC recurrence 4306M_s7_AAGCCC

text: RCC recurrence


text: live

text: Generic

text: Homo sapiens

text: renal

text: clear cell renal cell carcinoma

text: RCC recurrence 4306M_s7_CACACC

text: RCC recurrence


text: live

text: Generic

text: Homo sapiens

text: renal

text: clear cell renal cell carcinoma

text: RCC recurrence 4306M_s7_CATCGG

text: RCC recurrence


text: live

text: Generic

text: Homo sapiens

text: renal

text: clear cell renal cell carcinoma

text: RCC recurrence 4306M_s7_CCCCTT

text: RCC recurrence


text: live

text: Generic

text: clear cell renal cell carcinoma stage IV

text: Homo sapiens

text: renal

text: clear cell renal cell carcinoma

text: RCC stage IV 30K1R_s5_CACACC

text: RCC stage IV


text: live

text: Generic

text: Homo sapiens

text: renal

text: clear cell renal cell carcinoma

text: RCC stage IV 42T2V_s1_CATCGG

text: RCC stage IV


text: live

text: Generic

text: Homo sapiens

text: renal

text: clear cell renal cell carcinoma

text: RCC stage IV 42T2V_s1_TCGTTG

text: RCC stage IV


text: live

text: Generic

text: Homo sapiens

text: renal

text: clear cell renal cell carcinoma

text: RCC stage IV 4306M_s7_TCGTTG

text: RCC stage IV


text: live

text: Generic

text: Homo sapiens

text: renal

text: clear cell renal cell carcinoma

text: RCC stage IV 4306M_s8_AAGCCC

text: RCC stage IV


text: live

text: Generic

text: Homo sapiens

text: renal

text: clear cell renal cell carcinoma

text: RCC stage IV 4306M_s8_CACACC

text: RCC stage IV


text: live

text: Generic

text: Homo sapiens

text: renal

text: clear cell renal cell carcinoma

text: RCC stage IV 4306M_s8_CCCCTT

text: RCC stage IV


text: live

text: Generic

text: clear cell renal cell carcinoma without recurrence

text: Homo sapiens

text: renal

text: clear cell renal cell carcinoma

text: RCC without recurrence 42T2V_s2_CACACC

text: RCC without recurrence


text: live

text: Generic

text: Homo sapiens

text: renal

text: clear cell renal cell carcinoma

text: RCC without recurrence 42T2V_s2_CATCGG

text: RCC without recurrence


text: live

text: Generic

text: Homo sapiens

text: renal

text: clear cell renal cell carcinoma

text: RCC without recurrence 42T2V_s2_TCGTTG

text: RCC without recurrence


text: live

text: Generic

text: Homo sapiens

text: renal

text: clear cell renal cell carcinoma

text: RCC without recurrence 42T2Y_s5_CACACC

text: RCC without recurrence


text: live

text: Generic

text: Homo sapiens

text: renal

text: clear cell renal cell carcinoma

text: RCC without recurrence 42T2Y_s5_CATCGG

text: RCC without recurrence


text: live

text: Generic

text: Homo sapiens

text: renal

text: clear cell renal cell carcinoma

text: RCC without recurrence 42T2Y_s6_CCCCTT

text: RCC without recurrence


text: live

text: Generic

text: Homo sapiens

text: renal

text: clear cell renal cell carcinoma

text: RCC without recurrence 42T2Y_s6_TCGTTG

text: RCC without recurrence


text: live

text: Generic

characteristic: cell line

text: Homo sapiens

text: renal cell line

text: SKRC7 4306M_s8_CATCGG


text: live

text: Generic

text: Homo sapiens

text: renal cell line

text: MZ1257 4306M_s8_TCGTTG


text: Institute for Genome Sciences University of MD School of Medicine

text: live

text: Generic

text: Drosophila ananassae

text: Drosophila ananassae 14024-0371.34


text: IFOM FIRC Institute for Molecular Oncology Foundation

text: live

text: Generic

text: HeLa S3

text: Homo sapiens

text: cervical cancer cell line

text: input DNA


text: live

text: Generic

text: HeLa S3

characteristic: chip antibody

characteristic: chip lot

text: Active Motif

characteristic: chip vendor

text: Homo sapiens

text: cervical cancer cell line


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: HeLa S3

text: Abcam

text: Homo sapiens

text: cervical cancer cell line


text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: HeLa S3

text: Homo sapiens

characteristic: organism

text: cervical cancer cell line

text: input DNA (low-density fractions)


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: HeLa S3

text: polyclonal, gift of Mauro Giacca

text: Homo sapiens

text: cervical cancer cell line (low-density fractions)

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: HeLa S3

text: Homo sapiens

text: cervical cancer cell line

text: High-density fractions(fr14-15-16)


text: live

text: Generic

text: HeLa S3

text: BrdU

text: Becton Dickinson

text: Homo sapiens

text: cervical cancer cell line

text: BrdU_RepliSeq S1


text: live

text: Generic

text: HeLa S3

text: BrdU

text: Becton Dickinson

text: Homo sapiens

text: cervical cancer cell line

text: BrdU_RepliSeq S2


text: live

text: Generic

text: HeLa S3

text: BrdU

text: Becton Dickinson

text: Homo sapiens

text: cervical cancer cell line

text: BrdU_RepliSeq S3


text: live

text: Generic

text: HeLa S3

text: BrdU

text: Becton Dickinson

text: Homo sapiens

text: cervical cancer cell line

text: BrdU_RepliSeq S4


text: live

text: Generic

text: HeLa S3

text: BrdU

text: Becton Dickinson

text: Homo sapiens

text: cervical cancer cell line

text: BrdU_RepliSeq S5


text: live

text: Generic

text: HeLa S3

text: BrdU

text: Becton Dickinson

text: Homo sapiens

text: cervical cancer cell line

text: BrdU_RepliSeq S6


text: live

text: Generic

text: HeLa S3

text: BrdU

text: Becton Dickinson

text: Homo sapiens

text: cervical cancer cell line

text: BrdU_IP Total DNA


text: live

text: Generic

text: Drosophila ananassae

text: Drosophila ananassae 14024-0371.31


ZCTRLA

text: University of Colorado School of Medicine

text: live

text: Generic

text: Control sample

characteristic: description

text: gut metagenome

text: rat gut metagenome


ZCTRLB

text: live

text: Generic

text: Control sample

text: gut metagenome

text: rat gut metagenome


ZCTRLC

text: live

text: Generic

text: Control sample

text: gut metagenome

text: rat gut metagenome


ZKRVA

text: live

text: Generic

text: KRV infected

text: gut metagenome

text: rat gut metagenome


ZKRVB

text: live

text: Generic

text: KRV infected

text: gut metagenome

text: rat gut metagenome


ZKRVC

text: live

text: Generic

text: KRV infected

text: gut metagenome

text: rat gut metagenome


ZKRVD

text: live

text: Generic

text: KRV infected

text: gut metagenome

text: rat gut metagenome


ZKSA

text: live

text: Generic

text: KRV + sulfatrim

text: gut metagenome

text: rat gut metagenome


ZKSB

text: live

text: Generic

text: KRV + sulfatrim

text: gut metagenome

text: rat gut metagenome


ZKSC

text: live

text: Generic

text: KRV + sulfatrim

text: gut metagenome

text: rat gut metagenome


ZCTRLD

text: live

text: Generic

text: Control sample

text: gut metagenome

text: rat gut metagenome


ZCTRLE

text: live

text: Generic

text: Control sample

text: gut metagenome

text: rat gut metagenome


ZCTRLF

text: live

text: Generic

text: Control sample

text: gut metagenome

text: rat gut metagenome


ZCTRLG

text: live

text: Generic

text: Control sample

text: gut metagenome

text: rat gut metagenome


ZKRVE

text: live

text: Generic

text: KRV infected

text: gut metagenome

text: rat gut metagenome


ZKRVF

text: live

text: Generic

text: KRV infected

text: gut metagenome

text: rat gut metagenome


ZKRVG

text: live

text: Generic

text: KRV infected

text: gut metagenome

text: rat gut metagenome


ZKSD

text: live

text: Generic

text: KRV + sulfatrim

text: gut metagenome

text: rat gut metagenome


ZKSE

text: live

text: Generic

text: KRV + sulfatrim

text: gut metagenome

text: rat gut metagenome


ZKSF

text: live

text: Generic

text: KRV + sulfatrim

text: gut metagenome

text: rat gut metagenome


text: live

text: Generic

text: Drosophila ananassae

text: Drosophila ananassae 14024-0371.31x14024-0371.12


text: Center for Brain Integration Research, Tokyo Medical and Dental University

text: live

text: Generic

characteristic: developmental stage

text: Mus musculus

text: manually dissected E16 V/SVZ tissue

text: ICR

characteristic: strain

text: V/SVZ

characteristic: tissue


text: live

text: Generic

text: Mus musculus

text: manually dissected E16 CP tissue

text: ICR

text: CP


text: live

text: Generic

text: Drosophila ananassae

text: Drosophila ananassae 14024-0371.13


name: Salmonella enterica subsp. enterica serovar Bareilly str. ATCC 9115

text: clinical/research

characteristic: IFSAC+ Category

text: Food and Drug Administration, Center for Food Safety and Applied Nutrition

text: live

text: Pathogen.env

text: environmental/food/other

text: Generic

characteristic: biosamplemodel

characteristic: ontological term

text: Bareilly

characteristic: serovar

text: ATCC 9115

text: enterica

characteristic: sub species


text: Gene Expression Omnibus

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: FHCRC

characteristic: biomaterial provider

text: Cell Line

characteristic: biomaterial type

characteristic: cell type

text: Bulk lymphocytes were purified from cord blood and further selected by flow cytometry

text: presumed normal

characteristic: disease

text: 0.0 Years

characteristic: donor age

text: presumed normal

characteristic: donor health status

characteristic: donor id

text: female

characteristic: donor sex

characteristic: markers

text: genomic DNA

characteristic: molecule

text: Homo sapiens

text: Generic sample from Homo sapiens


characteristic: External Id

text: University of Michigan

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: SRA accession

text: hydrothermal vent metagenome

characteristic: organism

text: Guaymas Basin Hydrothermal Vent Metatranscriptome - 454 GD8

characteristic: title


carrol

text: University of California, Berkeley

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Preborn infant gut metagenome - all human reads removed

characteristic: description

text: human gut metagenome

text: Carrol - preborn infant gut metagenome


text: ENCODE DCC

text: live

text: Generic

text: ATCC

characteristic: biomaterial provider

text: RnaSeq

characteristic: datatype

text: Sequencing analysis of RNA expression

characteristic: datatype description

characteristic: labexpid

characteristic: labversion

characteristic: mapalgorithm

text: bowtie v0.12.5

characteristic: mapalgorithm description

text: Homo sapiens

characteristic: readtype

text: Single 36 nt reads

characteristic: readtype description

characteristic: replicate

text: longPolyA

characteristic: rnaextract

text: Poly(A)+ RNA longer than 200 nt

characteristic: rnaextract description

text: HudsonAlpha_RnaSeq_A549_DEX_100pM_longPolyA (superseded by GSE93436)

text: 1 h with 100 pM Dexamethasone (Myers)

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: SRA accession

text: ATCC

text: RnaSeq

text: Sequencing analysis of RNA expression

text: bowtie v0.12.5

text: Homo sapiens

characteristic: organism

text: Single 36 nt reads

text: longPolyA

text: Poly(A)+ RNA longer than 200 nt

text: SK-N-SH

text: HudsonAlpha_RnaSeq_SK-N-SH_longPolyA (superseded by GSE93449)

characteristic: title

text: No special treatment or protocol applies


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: ATCC

characteristic: biomaterial provider

text: immortalized cell line

characteristic: biomaterial type

text: RnaSeq

characteristic: datatype

text: Sequencing analysis of RNA expression

characteristic: datatype description

characteristic: labexpid

characteristic: labversion

characteristic: line

characteristic: mapalgorithm

text: bowtie v0.12.5

text: Homo sapiens

text: Single 36 nt reads

text: longPolyA

text: Poly(A)+ RNA longer than 200 nt

text: HudsonAlpha_RnaSeq_A549_DEX_100nM_longPolyA

text: 1 h with 100 nM Dexamethasone (Myers)


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: ATCC

text: RnaSeq

text: Sequencing analysis of RNA expression

text: bowtie v0.12.5

characteristic: mapalgorithm description

text: Homo sapiens

characteristic: readtype

text: Single 36 nt reads

characteristic: readtype description

characteristic: replicate

text: longPolyA

characteristic: rnaextract

text: Poly(A)+ RNA longer than 200 nt

characteristic: rnaextract description

text: HudsonAlpha_RnaSeq_PANC-1_longPolyA (superseded by GSE93450)

characteristic: treatment description


text: ENCODE DCC

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: ATCC

characteristic: biomaterial provider

text: endoderm

characteristic: cell lineage

text: RnaSeq

text: Sequencing analysis of RNA expression

text: bowtie v0.12.5

text: Homo sapiens

characteristic: organism

text: Single 36 nt reads

text: longPolyA

text: Poly(A)+ RNA longer than 200 nt

text: HudsonAlpha_RnaSeq_ECC-1_BPA_100nM_4hr_longPolyA (superseded by GSE93437)

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: ATCC

text: endoderm

text: RnaSeq

characteristic: datatype

text: Sequencing analysis of RNA expression

characteristic: datatype description

characteristic: labexpid

characteristic: labversion

characteristic: mapalgorithm

text: bowtie v0.12.5

characteristic: mapalgorithm description

text: Homo sapiens

text: Single 36 nt reads

text: longPolyA

text: Poly(A)+ RNA longer than 200 nt

text: HudsonAlpha_RnaSeq_ECC-1_DMSO_4hr_longPolyA (superseded by GSE93438)


text: ENCODE DCC

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: ATCC

text: RnaSeq

text: Sequencing analysis of RNA expression

text: bowtie v0.12.5

text: Homo sapiens

characteristic: readtype

text: Single 36 nt reads

characteristic: readtype description

characteristic: replicate

text: longPolyA

characteristic: rnaextract

text: Poly(A)+ RNA longer than 200 nt

characteristic: rnaextract description

text: Jurkat

text: HudsonAlpha_RnaSeq_Jurkat_longPolyA (superseded by GSE93435)

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: ATCC

characteristic: biomaterial provider

text: RnaSeq

text: Sequencing analysis of RNA expression

text: bowtie v0.12.5

text: Homo sapiens

characteristic: organism

text: Single 36 nt reads

text: longPolyA

text: Poly(A)+ RNA longer than 200 nt

text: HudsonAlpha_RnaSeq_A549_EtOH_0.02pct_longPolyA

characteristic: title

text: 1 h with 0.02% Ethanol (Myers)


text: ENCODE DCC

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: ATCC

text: endoderm

characteristic: cell lineage

text: RnaSeq

characteristic: datatype

text: Sequencing analysis of RNA expression

characteristic: datatype description

characteristic: labexpid

characteristic: labversion

characteristic: mapalgorithm

text: bowtie v0.12.5

characteristic: mapalgorithm description

text: Homo sapiens

text: Single 36 nt reads

text: longPolyA

text: Poly(A)+ RNA longer than 200 nt

text: HudsonAlpha_RnaSeq_ECC-1_Genistein_100nM_4hr_longPolyA (superseded by GSE93440)

text: 4 h with 100 nM Genistein (Myers)


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: ATCC

text: endoderm

text: RnaSeq

text: Sequencing analysis of RNA expression

text: bowtie v0.12.5

text: Homo sapiens

characteristic: readtype

text: Single 36 nt reads

characteristic: readtype description

characteristic: replicate

text: longPolyA

characteristic: rnaextract

text: Poly(A)+ RNA longer than 200 nt

characteristic: rnaextract description

text: HudsonAlpha_RnaSeq_ECC-1_Estradiol_10nM_4hr_longPolyA (superseded by GSE93439)


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: ATCC

characteristic: biomaterial provider

text: RnaSeq

text: Sequencing analysis of RNA expression

text: bowtie v0.12.5

text: Homo sapiens

characteristic: organism

text: Single 36 nt reads

text: longPolyA

text: Poly(A)+ RNA longer than 200 nt

text: HudsonAlpha_RnaSeq_T-47D_DMSO_4hr_longPolyA (superseded by GSE93442)

characteristic: title


text: ENCODE DCC

characteristic: INSDC last update

text: live

text: Generic

text: ATCC

text: RnaSeq

characteristic: datatype

text: Sequencing analysis of RNA expression

characteristic: datatype description

characteristic: labexpid

characteristic: labversion

characteristic: mapalgorithm

text: bowtie v0.12.5

characteristic: mapalgorithm description

text: Homo sapiens

text: Single 36 nt reads

text: longPolyA

text: Poly(A)+ RNA longer than 200 nt

text: HudsonAlpha_RnaSeq_T-47D_BPA_100nM_4hr_longPolyA (superseded by GSE93441)


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: ATCC

text: RnaSeq

text: Sequencing analysis of RNA expression

text: bowtie v0.12.5

text: Homo sapiens

characteristic: readtype

text: Single 36 nt reads

characteristic: readtype description

characteristic: replicate

text: longPolyA

characteristic: rnaextract

text: Poly(A)+ RNA longer than 200 nt

text: HudsonAlpha_RnaSeq_PFSK-1_longPolyA (superseded by GSE93451)

characteristic: treatment description


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: ATCC

characteristic: biomaterial provider

text: RnaSeq

text: Sequencing analysis of RNA expression

text: bowtie v0.12.5

text: Homo sapiens

characteristic: organism

text: Single 36 nt reads

text: longPolyA

text: Poly(A)+ RNA longer than 200 nt

characteristic: rnaextract description

text: HudsonAlpha_RnaSeq_T-47D_Estradiol_10nM_4hr_longPolyA (superseded by GSE93443)


text: ENCODE DCC

characteristic: INSDC last update

text: live

text: Generic

text: ATCC

text: RnaSeq

characteristic: datatype

text: Sequencing analysis of RNA expression

characteristic: datatype description

characteristic: labexpid

characteristic: labversion

characteristic: mapalgorithm

text: bowtie v0.12.5

characteristic: mapalgorithm description

text: Homo sapiens

text: Single 36 nt reads

text: longPolyA

text: Poly(A)+ RNA longer than 200 nt

text: HudsonAlpha_RnaSeq_A549_DEX_500pM_longPolyA (superseded by GSE93446)

characteristic: title

text: 1 h with 500 pM Dexamethasone (Myers)


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: ATCC

text: RnaSeq

text: Sequencing analysis of RNA expression

text: bowtie v0.12.5

text: Homo sapiens

characteristic: readtype

text: Single 36 nt reads

characteristic: readtype description

characteristic: replicate

text: longPolyA

characteristic: rnaextract

text: Poly(A)+ RNA longer than 200 nt

text: HudsonAlpha_RnaSeq_A549_DEX_1nM_longPolyA (superseded by GSE93445)

text: 1 h with 1 nM Dexamethasone (Myers)

characteristic: treatment description


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: ATCC

characteristic: biomaterial provider

text: RnaSeq

text: Sequencing analysis of RNA expression

text: bowtie v0.12.5

text: Homo sapiens

characteristic: organism

text: Single 36 nt reads

text: longPolyA

text: Poly(A)+ RNA longer than 200 nt

characteristic: rnaextract description

text: HudsonAlpha_RnaSeq_BE2_C_longPolyA (superseded by GSE93448)


text: ENCODE DCC

characteristic: INSDC last update

text: live

text: Generic

text: ATCC

text: RnaSeq

characteristic: datatype

text: Sequencing analysis of RNA expression

characteristic: datatype description

characteristic: labexpid

characteristic: labversion

characteristic: mapalgorithm

text: bowtie v0.12.5

characteristic: mapalgorithm description

text: Homo sapiens

text: Single 36 nt reads

text: longPolyA

text: Poly(A)+ RNA longer than 200 nt

text: HudsonAlpha_RnaSeq_A549_DEX_5nM_longPolyA (superseded by GSE93447)

characteristic: title

text: 1 h with 5 nM Dexamethasone (Myers)


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: ATCC

text: RnaSeq

text: Sequencing analysis of RNA expression

text: bowtie v0.12.5

text: Homo sapiens

characteristic: readtype

text: Single 36 nt reads

characteristic: readtype description

characteristic: replicate

text: longPolyA

characteristic: rnaextract

text: Poly(A)+ RNA longer than 200 nt

text: HudsonAlpha_RnaSeq_T-47D_Genistein_100nM_4hr_longPolyA (superseded by GSE93444)

text: 4 h with 100 nM Genistein (Myers)

characteristic: treatment description


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: ATCC

characteristic: biomaterial provider

text: RnaSeq

text: Sequencing analysis of RNA expression

text: bowtie v0.12.5

text: Homo sapiens

characteristic: organism

text: Single 36 nt reads

text: longPolyA

text: Poly(A)+ RNA longer than 200 nt

characteristic: rnaextract description

text: HudsonAlpha_RnaSeq_U87_longPolyA (superseded by GSE90176)

text: No special treatment or protocol applies


Rhesus 21353

text: University of Nebraska - Non Human Primate Genomics Center

characteristic: INSDC last update

text: live

text: Generic

text: Genomic DNA was extracted from a male, Chinese-origin rhesus macaque (animal 21353) at the Oregon National Primate Research Center.

characteristic: description

text: Macaca mulatta

text: Rhesus macaque (animal number 21353)

characteristic: title


characteristic: External Id

text: The Salk Institute for Biological Studies

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Arabidopsis thaliana


Buckhorn-Pass

text: live

text: Generic

text: Arabidopsis thaliana

text: Buckhorn-Pass


Co

text: live

text: Generic

text: Arabidopsis thaliana

text: Co


Duk

text: live

text: Generic

text: Arabidopsis thaliana

text: Duk


Hod

text: live

text: Generic

text: Arabidopsis thaliana

text: Hod


HSm

text: live

text: Generic

text: Arabidopsis thaliana

text: HSm


Kent

text: live

text: Generic

text: Arabidopsis thaliana

text: Kent


Koln

text: live

text: Generic

text: Arabidopsis thaliana

text: Koln


Lisse

text: live

text: Generic

text: Arabidopsis thaliana

text: Lisse


Litva

text: live

text: Generic

text: Arabidopsis thaliana

text: Litva


Sorbo

text: live

text: Generic

text: Arabidopsis thaliana

text: Sorbo


Utrecht

text: live

text: Generic

text: Arabidopsis thaliana

text: Utrecht


text: Jindan Yu, Medicine, Northwestern Univ.

text: live

text: Generic

text: LNCaP

characteristic: cell line

text: anti-AR

characteristic: chip antibody

text: Millipore

characteristic: chip antibody vendor

text: control

characteristic: genotype/variation

text: Homo sapiens

text: LNCaP

text: hormone-deprived

characteristic: treatment protocol


text: Jindan Yu, Medicine, Northwestern Univ.

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission model

text: LNCaP

text: anti-AR

text: Millipore

text: FoxA1 knockdown

text: Homo sapiens

text: LNCaP

text: hormone-deprived


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM12812

characteristic: biomaterial provider

characteristic: cell

text: B-Lymphocyte, Lymphoblastoid, International HapMap Project, CEPH/Utah, Treatment: Epstein-Barr Virus transformed

characteristic: cell description

text: normal

characteristic: cell karyotype

text: mesoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: M

characteristic: cell sex

text: RepliSeq

characteristic: datatype

text: Assessment of DNA Replication Timing

characteristic: datatype description

text: UW

characteristic: lab

text: Stamatoyannopoulous - University of Washington

characteristic: lab description

characteristic: labexpid

text: Homo sapiens

characteristic: phase

text: Flow sorted, G1b phase corresponds to the second half of the first DNA content window

characteristic: phase description

characteristic: replicate


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM12801

text: B-lymphocyte, lymphoblastoid, International HapMap Project, CEPH/Utah, treatment: Epstein-Barr Virus transformed

text: mesoderm

text: human

text: M

text: RepliSeq

text: Assessment of DNA Replication Timing

text: UW

text: Homo sapiens

characteristic: organism

characteristic: title


text: ENCODE DCC

text: live

text: Generic

characteristic: SRA accession

text: ATCC

characteristic: biomaterial provider

text: SK-N-SH

characteristic: cell

text: neuroblastoma, newly promoted to tier 2: not in 2011 analysis, the SK-N-SH line was established from a neuroblastoma in a 4 year old individual.

characteristic: cell description

text: cancer

characteristic: cell karyotype

text: ectoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: F

characteristic: cell sex

text: RepliSeq

characteristic: datatype

text: Assessment of DNA Replication Timing

characteristic: datatype description

text: UW

text: Homo sapiens

text: SK-N-SH


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: ATCC

text: mammary gland, adenocarcinoma. (PMID: 4357757), newly promoted to tier 2: not in 2011 analysis

text: cancer

text: ectoderm

text: human

text: F

text: RepliSeq

text: Assessment of DNA Replication Timing

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Homo sapiens

characteristic: phase

characteristic: phase description

characteristic: replicate


text: ENCODE DCC

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM06990

characteristic: biomaterial provider

characteristic: cell

text: lymphoblastoid, International HapMap Project, CEPH/Utah, treatment: Epstein-Barr Virus transformed

characteristic: cell description

text: normal

text: mesoderm

text: human

text: F

text: RepliSeq

text: Assessment of DNA Replication Timing

text: UW

text: Homo sapiens

characteristic: organism

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: ATCC

text: BJ

text: skin fibroblast, The line was established from skin taken from normal foreskin. - ATCC. (PMID: 9916803)

text: normal

characteristic: cell karyotype

text: human

characteristic: cell organism

text: M

characteristic: cell sex

text: RepliSeq

characteristic: datatype

text: Assessment of DNA Replication Timing

characteristic: datatype description

text: UW

text: Homo sapiens

text: BJ


text: ENCODE DCC

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Lonza

text: NHEK

text: epidermal keratinocytes

text: normal

text: ectoderm

characteristic: cell lineage

text: human

text: F

text: RepliSeq

text: Assessment of DNA Replication Timing

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Homo sapiens

characteristic: phase

characteristic: phase description

characteristic: replicate

text: NHEK


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: ATCC

characteristic: biomaterial provider

characteristic: cell

text: liver carcinoma

characteristic: cell description

text: cancer

text: endoderm

text: human

text: M

text: RepliSeq

text: Assessment of DNA Replication Timing

text: UW

text: Homo sapiens

characteristic: organism

characteristic: title


text: ENCODE DCC

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: ATCC

text: fetal lung fibroblasts, newly promoted to tier 2: not in 2011 analysis

text: normal

characteristic: cell karyotype

text: endoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: F

characteristic: cell sex

text: RepliSeq

characteristic: datatype

text: Assessment of DNA Replication Timing

characteristic: datatype description

text: UW

text: Homo sapiens


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

text: ATCC

text: leukemia, The continuous cell line K-562 was established by Lozzio and Lozzio from the pleural effusion of a 53-year-old female with chronic myelogenous leukemia in terminal blast crises. - ATCC

text: cancer

text: mesoderm

text: human

text: F

text: RepliSeq

text: Assessment of DNA Replication Timing

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Homo sapiens

characteristic: phase

text: Flow sorted, G1 phase corresponds to the first DNA content window

characteristic: phase description

characteristic: replicate