text: live

text: MIGS.ba

text: Velvet v. 0.7.57

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

text: Sample Type : genomic dna

characteristic: description

text: not determined

characteristic: estimated size

characteristic: feature

text: Level 2: High-Quality Draft68.2x

characteristic: finishing strategy (depth of coverage)

text: not determined

characteristic: geo loc name

characteristic: host taxid

text: not determined

text: not determined

characteristic: lat lon

text: biological product [ENVO:02000043]

characteristic: material

text: not determined

characteristic: misc_param: HMP body site

text: skin

characteristic: misc_param: HMP supersite

text: not determined

text: not determined

text: Cutibacterium acnes HL083PA1

text: Propionibacterium acnes HL083PA1

characteristic: project name

text: Reference Genome

text: not determined

text: Illumina

text: BEI HM-537

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Propionibacterium acnes HL083PA1


status: PUBLIC

characteristic: External Id

text: Washington University, Genome Sequencing Center

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Velvet v. 0.7.57

tag: attribute

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

text: not determined

text: Sample Type : genomic dna

text: not determined

text: human-associated habitat [ENVO:00009003]

text: Level 2: High-Quality Draft68x;24

text: not determined

text: not determined

text: not determined

text: biological product [ENVO:02000043]

text: not determined

text: skin

text: not determined

characteristic: nucleic acid extraction

text: not determined

text: Cutibacterium acnes HL083PA2

characteristic: organism

text: Propionibacterium acnes HL083PA2

text: Reference Genome

text: not determined

text: Illumina GAii

characteristic: sequencing method

characteristic: sop

text: BEI HM-538

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Propionibacterium acnes HL083PA2

characteristic: title


text: live

text: MIGS.ba

text: Velvet v. 0.7.57

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

text: Sample Type : genomic dna

characteristic: description

text: not determined

characteristic: estimated size

characteristic: feature

text: Level 2: High-Quality Draft66.1x

characteristic: finishing strategy (depth of coverage)

text: not determined

characteristic: geo loc name

characteristic: host taxid

text: not determined

text: not determined

characteristic: lat lon

text: biological product [ENVO:02000043]

characteristic: material

text: not determined

characteristic: misc_param: HMP body site

text: skin

characteristic: misc_param: HMP supersite

text: not determined

text: not determined

text: Cutibacterium acnes HL086PA1

text: Propionibacterium acnes HL086PA1

characteristic: project name

text: Reference Genome

text: not determined

text: Illumina

text: BEI HM-539

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Propionibacterium acnes HL086PA1


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Velvet v. 0.7.57

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

text: not determined

text: Sample Type : genomic dna

text: not determined

text: Level 2: High-Quality Draft68.5x

text: not determined

text: not determined

text: skin

characteristic: isolation-source

text: not determined

text: biological product [ENVO:02000043]

text: not determined

text: skin

text: not determined

characteristic: nucleic acid extraction

text: not determined

text: Cutibacterium acnes HL087PA1

characteristic: organism

text: Propionibacterium acnes HL087PA1

text: Reference Genome

text: not determined

text: Illumina

characteristic: sequencing method

characteristic: sop

text: BEI HM-540

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Propionibacterium acnes HL087PA1


text: live

text: MIGS.ba

text: Velvet v. 0.7.57

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

text: Sample Type : genomic dna

characteristic: description

text: not determined

characteristic: estimated size

characteristic: feature

text: Level 2: High-Quality Draft70.3x

characteristic: finishing strategy (depth of coverage)

text: not determined

characteristic: geo loc name

characteristic: host taxid

text: not determined

text: not determined

characteristic: lat lon

text: biological product [ENVO:02000043]

characteristic: material

text: not determined

characteristic: misc_param: HMP body site

text: skin

characteristic: misc_param: HMP supersite

text: not determined

text: not determined

text: Cutibacterium acnes HL087PA2

text: Propionibacterium acnes HL087PA2

characteristic: project name

text: Reference Genome

text: not determined

text: Illumina

text: BEI HM-541

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Propionibacterium acnes HL087PA2

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Velvet v. 0.7.57

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

text: not determined

text: Sample Type : genomic dna

text: not determined

text: Level 2: High-Quality Draft67.5x

text: not determined

text: not determined

text: not determined

text: biological product [ENVO:02000043]

text: not determined

text: skin

text: not determined

characteristic: nucleic acid extraction

text: not determined

text: Cutibacterium acnes HL087PA3

characteristic: organism

text: Propionibacterium acnes HL087PA3

text: Reference Genome

text: not determined

text: Illumina

characteristic: sequencing method

text: BEI HM-542

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Propionibacterium acnes HL087PA3


text: live

text: MIGS.ba

text: Velvet v. 0.7.57

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

text: Sample Type : genomic dna

characteristic: description

text: not determined

characteristic: estimated size

characteristic: feature

text: Level 2: High-Quality Draft66.6x

characteristic: finishing strategy (depth of coverage)

text: not determined

characteristic: geo loc name

characteristic: host taxid

text: not determined

text: not determined

characteristic: lat lon

text: biological product [ENVO:02000043]

characteristic: material

text: not determined

characteristic: misc_param: HMP body site

text: skin

characteristic: misc_param: HMP supersite

text: not determined

text: not determined

text: Cutibacterium acnes HL092PA1

text: Propionibacterium acnes HL092PA1

characteristic: project name

text: Reference Genome

text: not determined

text: Illumina

characteristic: sop

text: BEI HM-543

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Propionibacterium acnes HL092PA1


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Velvet v. 0.7.57

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

text: not determined

text: Sample Type : genomic dna

text: not determined

text: Level 2: High-Quality Draft66.9x

text: not determined

text: not determined

text: not determined

text: biological product [ENVO:02000043]

text: not determined

text: skin

text: not determined

characteristic: nucleic acid extraction

text: not determined

text: Cutibacterium acnes HL110PA1

characteristic: organism

text: Propionibacterium acnes HL110PA1

text: Reference Genome

text: not determined

text: Illumina

text: BEI HM-552

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Propionibacterium acnes HL110PA1

characteristic: title


text: live

text: MIGS.ba

text: Velvet v. 0.7.57

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

text: Sample Type : genomic dna

characteristic: description

text: not determined

characteristic: estimated size

characteristic: feature

text: Level 2: High-Quality Draft69.4x

characteristic: finishing strategy (depth of coverage)

text: not determined

characteristic: geo loc name

characteristic: host taxid

text: not determined

text: not determined

characteristic: lat lon

text: biological product [ENVO:02000043]

characteristic: material

text: not determined

characteristic: misc_param: HMP body site

text: skin

characteristic: misc_param: HMP supersite

text: not determined

text: not determined

text: Cutibacterium acnes HL110PA2

text: Propionibacterium acnes HL110PA2

text: Reference Genome

text: not determined

text: Illumina

characteristic: sequencing method

text: BEI HM-553

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Propionibacterium acnes HL110PA2


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Velvet v. 0.7.57

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

text: not determined

text: Sample Type : genomic dna

text: not determined

text: Level 2: High-Quality Draft66.3x

text: not determined

text: not determined

text: not determined

text: biological product [ENVO:02000043]

text: not determined

text: skin

text: not determined

characteristic: nucleic acid extraction

text: not determined

text: Cutibacterium acnes HL110PA3

characteristic: organism

text: Propionibacterium acnes HL110PA3

characteristic: project name

text: Reference Genome

text: not determined

text: Illumina

characteristic: sop

text: BEI HM-554

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Propionibacterium acnes HL110PA3


text: live

text: MIGS.ba

text: Velvet v. 0.7.57

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

text: Sample Type : genomic dna

characteristic: description

text: not determined

characteristic: estimated size

characteristic: feature

text: Level 2: High-Quality Draft65.5x

characteristic: finishing strategy (depth of coverage)

text: not determined

characteristic: geo loc name

characteristic: host taxid

text: not determined

text: not determined

characteristic: lat lon

text: biological product [ENVO:02000043]

characteristic: material

text: not determined

characteristic: misc_param: HMP body site

text: skin

characteristic: misc_param: HMP supersite

text: not determined

text: not determined

text: Cutibacterium acnes HL110PA4

text: Propionibacterium acnes HL110PA4

text: Reference Genome

text: not determined

text: Illumina

text: BEI HM-555

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Propionibacterium acnes HL110PA4

characteristic: title


characteristic: External Id

text: CSIRO

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Isolated flow-sorted DNA of Triticum aestivum chromosome arm 7BS

text: Triticum aestivum

characteristic: organism

text: Triticum aestivum chromosome arm 7BS short read data


Default Sample for Run 3

text: QIBEBT

text: live

text: Generic

text: human oral metagenome

text: Default Sample for Run 3


text: Dunnlab at Brown University, Department of Ecology and Evolutionary Biology

text: live

text: Generic

text: Monterey Bay

characteristic: isolation source

text: Nanomia bijuga

text: Nanomia bijuga


text: live

text: Generic

text: pooled siphosomal and nectosomal growth zones of three Nanomia bijuga specimens.

characteristic: description

text: siphosomal and nectosomal growth zones

characteristic: dev stage

text: Nanomia bijuga

text: Monterey Bay

characteristic: sample source

text: Nanomia bijuga pooled siphosomal and nectosomal growth zones pool of three specimens.


text: live

text: Generic

text: pooled youngest gastrozooids and nectophores from two Nanomia bijuga specimens

text: gastrozooids and nectophores

text: Nanomia bijuga

text: Monterey Bay

text: Nanomia bijuga pooled gastrozooids and nectophores


name: Caenorhabditis elegans N2 larval L3 RNA biological replicate L3-1

text: University of Washington Genome Sciences

text: live

text: Generic

text: Exact times for growth after plating of starved L1s (all at 25 degrees C) were as follows: L3 for 26.75 hours (Pn.p cells divided once or twice; gonad just starting to turn up). This sample is available through the modENCODE DCC (www.modencode.org) as: larva_L3-1 This sample is a biological replicate for DCC project: larva_mid-L3_25dC_26.75_hrs_post-L1 Local library name: N2_L3-1 Quality values are ASCII encoded Phred + 33 through GAPipeline1.8.

text: Caenorhabditis elegans


name: Caenorhabditis elegans N2 exposed to Drechmeria coniospora 5hrs RNA sample 1

text: live

text: Generic

text: Adult C.elegans N2 fer-15 worms exposed to Drechmeria coniospora (DC) for 5 hours; 1st assay of infected worms. Worms provided by Jonathan Ewbank. This sample is available through the modENCODE DCC (www.modencode.org) as: Adult_Drechmeria_coniospora_1_5_hrs Local library name: DC-1-5 Quality values are ASCII encoded Phred + 33. Flowcell 61BDCAAXX was processed with GAPipeline 1.5. Flowcells 61BDEAAXX and 61BC1AAXX were processed with GAPipeline 1.8.

text: Caenorhabditis elegans


CA-GP-GP

text: The University of Hong Kong

text: live

text: Generic

text: bioreactor sludge metagenome

text: CA-GP-GP


SG-SG-UP

text: The University of Hong Kong

text: live

text: Generic

text: bioreactor sludge metagenome

text: SG-SG-UP


F-A

text: Kyung Hee Univ.

text: live

text: Generic

text: uncultured Microviridae

text: Diversity and abundance of single-stranded DNA viruses in human faeces


F-B

text: Kyung Hee Univ.

text: live

text: Generic

text: uncultured Microviridae


F-C

text: Kyung Hee Univ.

text: live

text: Generic

text: uncultured Microviridae


F-D

text: Kyung Hee Univ.

text: live

text: Generic

text: uncultured Microviridae


F-E

text: Kyung Hee Univ.

text: live

text: Generic

text: uncultured Microviridae


US-CO-CO

text: The University of Hong Kong

text: live

text: Generic

text: Activated sludge from Columbia US

text: bioreactor sludge metagenome

text: US-CO-CO


US-GR-PG

text: The University of Hong Kong

text: live

text: Generic

text: Activated sludge from US

text: bioreactor sludge metagenome

text: US-GR-PG


CN-HR-UN

text: The University of Hong Kong

text: live

text: Generic

text: Activated sludge from Harbin China

text: bioreactor sludge metagenome

text: CN-HR-UN


CN-BJ-BX

text: The University of Hong Kong

text: live

text: Generic

text: Activated sludge from Beijing China

text: bioreactor sludge metagenome

text: CN-BJ-BX


CN-QD-JM

text: The University of Hong Kong

text: live

text: Generic

text: Activated sludge from Qingdao China

text: bioreactor sludge metagenome

text: CN-QD-JM


CN-NJ-SJ

text: The University of Hong Kong

text: live

text: Generic

text: Activated sludge from Nanjing China

text: bioreactor sludge metagenome

text: CN-NJ-SJ


CN-SH-MH

text: The University of Hong Kong

text: live

text: Generic

text: Activated sludge from Shanghai China

text: bioreactor sludge metagenome

text: CN-SH-MH


CN-WH-LW

text: The University of Hong Kong

text: live

text: Generic

text: Activated sludge from Wuhan China

text: bioreactor sludge metagenome

text: CN-WH-LW


CN-GZ-DT

text: The University of Hong Kong

text: live

text: Generic

text: Activated sludge from Guangzhou China

text: bioreactor sludge metagenome

text: CN-GZ-DT


CN-HK-SH

text: The University of Hong Kong

text: live

text: Generic

text: Activated sludge from Shek-Wu-Hui Hong Kong China

text: bioreactor sludge metagenome

text: CN-HK-SH


CN-HK-SL

text: The University of Hong Kong

text: live

text: Generic

text: Activated sludge from Stanly Hong Kong China

text: bioreactor sludge metagenome

text: CN-HK-SL


text: The University of Hong Kong

text: live

text: Generic

text: Activated sludge from Sha-Tin Hong Kong China

text: bioreactor sludge metagenome


text: ENCODE DCC

text: live

text: Generic

text: Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM12878

characteristic: biomaterial provider

characteristic: cell

text: lymphoblastoid

characteristic: cell description

text: relatively normal

characteristic: cell karyotype

text: International HapMap Project - CEPH/Utah - European Caucasion; Epstein-Barr Virus

characteristic: cell lineage

text: Human

characteristic: cell organism

text: F

characteristic: cell sex

text: cell

characteristic: localization

text: Homo sapiens

text: total

characteristic: rnaextract


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: ATCC

text: leukemia

text: cancer

text: The continuous cell line K-562 was established by Lozzio and Lozzio from the pleural effusion of a 53-year-old female with chronic myelogenous leukemia in terminal blast crises. - ATCC

text: Human

text: F

text: cell

text: Homo sapiens

text: total

characteristic: title


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: ATCC

characteristic: biomaterial provider

text: leukemia

text: cancer

text: Human

text: F

text: cytosol

text: Homo sapiens

characteristic: organism

text: longPolyA


Voodoo Lily corm

text: Energy Biosciences Institute

text: live

text: Generic

text: Amorphophallus konjac

text: A.konjac developing corm


Theobroma cocoa

text: CSHL

text: live

text: Generic

text: Theobroma cocoa Illumina HiSeq whole genome sequencing

characteristic: description

text: Theobroma cacao

text: Theobroma cocoa Illumina whole genome sequencing


name: Caenorhabditis elegans N2 control for Drechmeria coniospora exposed to E. coli OP50 12hrs RNA sample 2

text: live

text: Generic

text: Uninfected control sample for Drechmeria coniospora (DC) infection. Adult fer-15 C. elegans N2 worms treated with OP50 for 12 hours; 2nd assay. Worms provided by Jonathan Ewbank. This sample is available through the modENCODE DCC (www.modencode.org) as: Adult_Drechmeria_coniospora_control_EcoliOP50_exposed_2_12hrs Local library name: OPDC-2-12 This sample is a control for experiment DC-2-12, available through the DCC at: Adult_Drechmeria_coniospora_2_12_hrs Quality values are ASCII encoded Phred + 33 through GAPipeline1.8.

text: Caenorhabditis elegans


name: Caenorhabditis elegans N2 exposed to Enterococcus faecali 24hrs RNA sample 1

text: live

text: Generic

text: Adult C. elegans N2 worms exposed to Enterococcus faecalis strain OG1RF (Ef) for 24 hours; 1st assay. Worms provided by Jonathan Ewbank. This sample is available through the modENCODE DCC (www.modencode.org) as: Adult_Enterococcus_faecalis_1_24hrs Local library name: EF-1-24 Quality values are ASCII encoded Phred + 33 through GAPipeline1.8.

text: Caenorhabditis elegans


name: Caenorhabditis elegans N2 exposed to Photorhabdus luminescens 24hrs RNA sample 2

text: live

text: Generic

text: Adult C. elegans N2 worms exposed to Photorhabdus luminescens strain Hb (PI) for 24 hours; 2nd assay. Worms provided by Jonathan Ewbank. This sample is available through the modENCODE DCC (www.modencode.org) as: Adult_Photorhabdus_luminescens_2_24hrs: Local library name: PL-2-24 Quality values are ASCII encoded Phred + 33 through GAPipeline1.8.

text: Caenorhabditis elegans


text: Institute of Bioinformatics and Systems Biology, NCTU

text: live

text: Generic

characteristic: age

characteristic: antibody

characteristic: ecotype

text: Arabidopsis thaliana

text: Wild type Arabidopsis Col-0

text: AGO1-associated sRNA_mock

text: Dr. Yijun Qi (NIBS, Beijing, China)

characteristic: vendor


characteristic: External Id

text: live

text: Generic

text: Arabidopsis thaliana

text: Wild type Arabidopsis Col-0

text: AGO1-associated sRNA_R2

text: Dr. Yijun Qi (NIBS, Beijing, China)


characteristic: INSDC center name

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis (AGO2::HA:AGO2)

text: AGO2-associated sRNA_mock

text: sc-805, santa cruz biotech, CA USA


characteristic: INSDC first public

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis (AGO2::HA:AGO2)

text: AGO2-associated sRNA_R2

text: sc-805, santa cruz biotech, CA USA


ICH_FQGAG9D Ich-4F-01-617 Sample

text: J. Craig Venter Institute

characteristic: INSDC last update

text: live

text: Generic

text: Whole genome shotgun sequencing of Ichthyophthirius multifiliis, strain G5, using a hybrid Sanger/454 strategy

text: Ichthyophthirius multifiliis strain G5

text: Generic sample from Ichthyophthirius multifiliis strain G5


text: Genome Technology Core, Whitehead Institute

characteristic: INSDC secondary accession

text: live

text: Generic

text: BFU-E

characteristic: cell population

characteristic: developmental stage

text: Mus musculus

text: Fetal liver E13.5-14.5

characteristic: strain

text: Fetal liver

characteristic: tissue


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: CFU-E

text: Mus musculus

text: Fetal liver E13.5-14.5

text: Fetal liver

characteristic: title


text: live

text: Generic

text: Mus musculus

characteristic: organism

text: Fetal liver E13.5-14.5

text: Fetal liver


text: live

text: Generic

characteristic: agent

text: BFU-E

text: Mus musculus

text: Fetal liver E13.5-14.5

text: Fetal liver


text: live

text: Generic

text: BFU-E

text: Mus musculus

text: Fetal liver E13.5-14.5

text: Fetal liver

text: BFU-E_CD71-24_4h_100nMDex_333uMDMOG_RNA-Seq


text: Zoonosis Laboratory of the Ministry of Agriculture, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences

text: live

text: Generic

text: 6-8 wk

characteristic: age

text: peritoneal macrophages

characteristic: cell type

text: female mice

characteristic: gender

text: BALB/c

characteristic: genetic background

text: control

characteristic: infection

text: Mus musculus

text: peritoneal macrophages

text: control Mc


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: 6-8 wk

text: peritoneal macrophages

text: female mice

text: BALB/c

text: B. melitensis M-28

text: Mus musculus

text: peritoneal macrophages

text: infected M28


text: live

characteristic: INSDC status

text: Generic

text: 6-8 wk

text: peritoneal macrophages

text: female mice

text: BALB/c

text: B. melitensis M-90

text: Mus musculus

text: peritoneal macrophages

text: infected M90


ICH_FPQPSEQ Ich-4F-01-617 Sample

text: J. Craig Venter Institute

text: live

text: Generic

characteristic: NCBI submission model

characteristic: description

text: Ichthyophthirius multifiliis strain G5


Nitrification Reactor

text: The University of Hong Kong

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Activated sludge from a nitrification reactor

text: bioreactor sludge metagenome

text: Nitrification Reactor


text: Gene Expression Omnibus

text: live

text: Generic

text: FHCRC

characteristic: biomaterial provider

text: Primary Cell

characteristic: biomaterial type

text: CD3 Primary Cells

text: flow sorted CD3+ cells from cord blood

characteristic: donor id

characteristic: markers

text: genomic DNA

characteristic: molecule

text: Homo sapiens

characteristic: organism

text: Generic sample from Homo sapiens

characteristic: title


characteristic: External Id

text: Gene Expression Omnibus

text: live

text: Generic

text: FHCRC

text: Primary Cell

text: CD3 Primary Cells

characteristic: cell type

text: flow sorted CD3+ cells from cord blood

text: genomic DNA

text: Homo sapiens

text: Generic sample from Homo sapiens


text: Cold Spring Harbor Laboratory

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Sparse sequencing of single cells from ductal carcinomas T16P

text: Homo sapiens

text: T16 Primary Breast Tumor


text: Washington University, Genome Sequencing Center

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: clincal sample from Europe

characteristic: isolation-source

text: Saccharomyces cerevisiae YJM451

characteristic: strain

text: Generic sample from Saccharomyces cerevisiae YJM451


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Sample Type : genomic dna

characteristic: description

text: Saccharomyces cerevisiae YJM451


text: live

text: Generic

characteristic: SRA accession

characteristic: collection-date

text: USA: Pennsylvania

characteristic: country

text: Sample Type : genomic dna

text: oak tree

text: Saccharomyces cerevisiae YPS163

text: Generic sample from Saccharomyces cerevisiae YPS163


text: live

text: Generic

text: Italy

text: Sample Type : genomic dna

text: vineyard

text: Saccharomyces cerevisiae M22

characteristic: organism

text: Generic sample from Saccharomyces cerevisiae M22


text: live

text: Generic

text: Sample Type : genomic dna

text: Escherichia phage T7

text: Generic sample from Enterobacteria phage T7

characteristic: title


characteristic: External Id

text: live

text: Generic

text: Escherichia phage T7


text: live

text: Generic

text: Sample Type : pooled dna

text: Escherichia phage T7


F-Bacteria

text: Kyung Hee Univ.

text: live

text: Generic

text: uncultured Microviridae

text: Diversity and abundance of single-stranded DNA viruses in human faeces


text: Department of Botany and Plant Sciences, University of California, Riverside

text: live

text: Generic

text: Arabidopsis thaliana

text: adult plants

text: Col gl1 RD29:LUC

text: Shoots

characteristic: tissue

text: control

characteristic: treatment


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Arabidopsis thaliana

text: adult plants

text: Col gl1 RD29:LUC

text: Shoots

text: drought


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Arabidopsis thaliana

text: adult plants

text: Col gl1 RD29:LUC

text: Shoots

text: cold


text: live

text: Generic

text: Arabidopsis thaliana

text: adult plants

text: Col gl1 RD29:LUC

characteristic: strain

text: Shoots

text: salt


text: live

characteristic: INSDC status

text: Generic

text: japonica

characteristic: cultivar

text: Oryza sativa Japonica Group

text: inflorescences

text: inflorescences

text: control


text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: japonica

text: Oryza sativa Japonica Group

text: inflorescences

text: inflorescences

text: drought


text: live

text: Generic

characteristic: SRA accession

text: japonica

text: Oryza sativa Japonica Group

text: inflorescences

text: inflorescences

text: cold


text: live

text: Generic

text: japonica

text: Oryza sativa Japonica Group

text: inflorescences

text: inflorescences

text: salt


name: wild-type chromatin (matched to tup1D sample)

text: University at Buffalo

text: live

text: Generic

text: Wild-type (BY4741) MNase-Seq mononucleosomal DNA. DNA was overdigested and matched by extent of overall digestion to paired BY4741/tup1D dataset from the same study. Matched samples were not gel purified, instead all remaining DNA at that digest was sequenced.

characteristic: description

text: Saccharomyces cerevisiae

text: BY4741 (wild-type)


tup1D chromatin (matched to wild-type)

text: University at Buffalo

text: live

text: Generic

text: BY4741/tup1D MNase-Seq mononucleosomal DNA. DNA was overdigested and matched by extent of overall digestion to paired BY4741 (wild-type) dataset from the same study. Matched samples were not gel purified, instead all remaining DNA at that digest was sequenced.

text: Saccharomyces cerevisiae


text: University of Zürich

text: live

text: Generic

text: wildtype

characteristic: maternal genotype/variation

text: Landsberg erecta (Ler)

characteristic: maternal strain

text: Arabidopsis thaliana

text: wildtype

characteristic: paternal genotype/variation

text: Columbia_0 (Col0)

characteristic: paternal strain

text: embryos (dissected)

text: 2-to-4 cells embryo stage with suspensor (partial)

characteristic: stage

text: total amplified RNA, 2-to-4 cells Ler/Col embryos, sample # LerCol_7


characteristic: External Id

text: University of Zürich

text: live

text: Generic

text: wildtype

text: Landsberg erecta (Ler)

text: Arabidopsis thaliana

characteristic: organism

text: Columbia_0 (Col0)

text: embryos (dissected)

text: globular embryo stage with suspensor (partial)

text: total amplified RNA, globular Ler/Col embryos, sample # LerCol_4

characteristic: title


text: University of Zürich

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: wildtype

text: Landsberg erecta (Ler)

text: Arabidopsis thaliana

text: Columbia_0 (Col0)

text: embryos (dissected)

text: total amplified RNA, 2-to-4 cells Ler/Col embryos, sample # KypCol_11


text: KAIST

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: NCCIT

characteristic: cell line

text: embryonic carcinoma cells

characteristic: cell type

text: IgG

characteristic: chip antibody

text: Homo sapiens

text: NCCIT, input

text: Input DNA


text: KAIST

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: NCCIT

text: embryonic carcinoma cells

text: Homo sapiens

text: NCCIT, MNase

text: MNase-seq


text: KAIST

text: live

text: Generic

characteristic: antibody catalog number

text: Millipore

characteristic: antibody vendor

text: NCCIT

text: embryonic carcinoma cells

text: Homo sapiens

text: NCCIT, H2BUb1 ChIP


text: KAIST

text: live

text: Generic

text: Abcam

text: NCCIT

text: embryonic carcinoma cells

text: Homo sapiens

text: NCCIT, H3K4me3 ChIP


text: KAIST

text: live

text: Generic

text: Abcam

text: NCCIT

text: embryonic carcinoma cells

text: Homo sapiens

text: NCCIT, H3K36me3 ChIP


text: KAIST

text: live

text: Generic

text: Abcam mixed with in-house antibody

text: NCCIT

text: embryonic carcinoma cells

text: Homo sapiens

text: NCCIT, H3K79me1 ChIP


text: KAIST

text: live

text: Generic

text: Abcam mixed with in-house antibody

text: NCCIT

text: embryonic carcinoma cells

text: Homo sapiens

text: NCCIT, H3K79me2 ChIP


text: KAIST

text: live

text: Generic

text: Abcam mixed with in-house antibody

text: NCCIT

text: embryonic carcinoma cells

text: Homo sapiens

text: NCCIT, H3K79me3 ChIP


text: KAIST

text: live

text: Generic

text: Millipore

text: NCCIT

text: embryonic carcinoma cells

text: Homo sapiens

text: NCCIT, H3Kac ChIP


text: KAIST

text: live

text: Generic

text: NCCIT

text: embryonic carcinoma cells

text: Homo sapiens

text: NCCIT, mRNA


text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus aureus 21172

characteristic: description

characteristic: strain

text: Generic sample from Staphylococcus aureus subsp. aureus 21172


Aegilops tauschii (wheat)

characteristic: External Id

text: CSHL

text: live

text: Generic

text: Aegilops tauschii Illumina HiSeq whole genome sequencing

text: Aegilops tauschii

characteristic: organism

text: Aegilops tauschii whole genome sequencing


text: Institute of Biotechnology, Zhejiang University

characteristic: INSDC center name

text: live

text: Generic

text: Solanum lycopersicum

characteristic: host

text: Agrobacterium-mediated inoculation

characteristic: inoculation method

text: TYLCCNV

characteristic: inoculum

text: Tomato yellow leaf curl China virus

text: TYLCCNV infected leaves

text: three weeks post-inoculation

characteristic: time

text: Solanum lycopersicum-inoculated with TYLCCNV-21dpi

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Solanum lycopersicum

text: Agrobacterium-mediated inoculation

text: TYLCCNV and TYLCCNB

text: Tomato yellow leaf curl China virus

text: TYLCCNV and TYLCCNB co-infectedleaves

text: three weeks post-inoculation

text: Solanum lycopersicum-inoculated with TYLCCNV/TYLCCNB-21dpi


text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Nicotiana benthamiana

text: Agrobacterium-mediated inoculation

text: TYLCCNV

text: Tomato yellow leaf curl China virus

text: TYLCCNV infected leaves

text: three weeks post-inoculation

text: Nicotiana benthamiana-inoculated with TYLCCNV-21dpi


text: live

text: Generic

text: Nicotiana benthamiana

text: Agrobacterium-mediated inoculation

text: TYLCCNV and TYLCCNB

text: Tomato yellow leaf curl China virus

text: TYLCCNV and TYLCCNB infected leaves

text: three weeks post-inoculation

text: Nicotiana benthamiana-inoculated with TYLCCNV/TYLCCNB-21dpi


text: live

text: Generic

text: Nicotiana benthamiana

text: Agrobacterium-mediated inoculation

text: TYLCCNV and mutant TYLCCNB

text: Tomato yellow leaf curl China virus

text: TYLCCNV and mutant TYLCCNB infected leaves

text: three weeks post-inoculation

text: Nicotiana benthamiana-inoculated with TYLCCNV/mutated TYLCCNB-21dpi


text: Molecular and Medical Pharmacology, UCLA

text: live

text: Generic

text: Postnatal 6-week

characteristic: age

text: Mus musculus

text: Cerebellum

text: Mecp2tm1.1Jae/+, mix background (129, C57BL/6 and BALB/c) backcrossed with BALB/c for >6 generations

text: Cerebellum

characteristic: tissue


characteristic: External Id

text: live

text: Generic

text: Postnatal 8-week

text: Mus musculus

text: Cerebellum

characteristic: strain

text: Cerebellum


text: Stem cell chromatin, Genetics, The Hebrew University of Jerusalem

characteristic: INSDC center name

text: live

text: Generic

text: Millipore/Upstate

characteristic: antibody vendor

characteristic: cell line

text: embryonic stem cells (ESCs)

characteristic: cell type

characteristic: chip antibody

text: Mus musculus

characteristic: organism

text: ES cells, untreated, H3K9ac ChIP

text: Control, ChIP-seq

text: untreated

characteristic: treatment


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Millipore/Upstate

text: embryonic stem cells (ESCs)

text: Mus musculus

text: ES cells, VPA, 4hrs, H3K9ac ChIP

text: 4 hours

characteristic: time

text: VPA, 4 hrs, ChIP-seq

characteristic: title

text: valproic acid (VPA)


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Millipore/Upstate

text: embryonic stem cells (ESCs)

text: Mus musculus

text: ES cells, VPA, 16hrs, H3K9ac ChIP

text: 16 hours

text: VPA, 16 hrs, ChIP-seq

text: valproic acid (VPA)


characteristic: External Id

text: live

text: Generic

characteristic: SRA accession

text: embryonic stem cells (ESCs)

text: Mus musculus

text: ES cells, untreated, input

text: Input, ChIP-seq

text: untreated


text: Faculty of Life Sciences, University of Manchester

characteristic: INSDC center name

text: live

text: Generic

text: adult

characteristic: developmental stage

text: male and female

characteristic: gender

text: wild type

characteristic: genotype

text: Tribolium castaneum

text: Tribolium castaneum adult individuals


text: live

text: Generic

text: 0-5 days

characteristic: age

text: embryo

text: male and female

text: wild type

text: Tribolium castaneum

text: Tribolium castaneum early embryos (0-5 days)


text: ENCODE DCC

text: live

text: Generic

text: ATCC

characteristic: biomaterial provider

characteristic: cell

text: liver carcinoma

characteristic: cell description

text: cancer

characteristic: cell karyotype

text: endoderm

characteristic: cell lineage

text: Human

characteristic: cell organism

text: M

characteristic: cell sex

text: Homo sapiens

characteristic: organism


text: ENCODE DCC

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: ScienCell

text: HAEpiC

text: amniotic epithelial cells

text: human

text: U

text: DnaseDgf

characteristic: datatype

text: DNase Digital Footprinting

characteristic: datatype description

text: UW

characteristic: lab

text: Stamatoyannopoulous - University of Washington

characteristic: lab description

characteristic: labversion

text: Homo sapiens

text: HAEpiC

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: ScienCell

characteristic: biomaterial provider

text: HMF

characteristic: cell

text: mammary fibroblasts

characteristic: cell description

text: human

text: F

text: DnaseDgf

text: DNase Digital Footprinting

text: UW

text: Homo sapiens

text: HMF


text: ENCODE DCC

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Lonza

text: SKMC

text: skeletal muscle cells

text: mesoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: U

characteristic: cell sex

text: DnaseDgf

text: DNase Digital Footprinting

text: UW

text: Homo sapiens

characteristic: organism

text: SKMC


text: ENCODE DCC

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: WiCell

text: undifferentiated embryonic stem cells

text: inner cell mass

text: human

text: U

text: DnaseDgf

characteristic: datatype

text: DNase Digital Footprinting

characteristic: datatype description

text: UW

characteristic: lab

text: Homo sapiens


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission package

text: Lonza

text: NHDF-Ad

text: adult dermal fibroblasts

text: normal

characteristic: cell karyotype

text: mesoderm

text: human

text: F

text: DnaseDgf

text: DNase Digital Footprinting

text: UW

characteristic: lab description

characteristic: labversion

text: Homo sapiens

text: NHDF-Ad

characteristic: title


text: ENCODE DCC

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: SRA accession

text: ScienCell

characteristic: biomaterial provider

text: HCPEpiC

characteristic: cell

text: choroid plexus epithelial cells

characteristic: cell description

text: ectoderm

characteristic: cell lineage

text: human

text: U

text: DnaseDgf

text: DNase Digital Footprinting

text: UW

text: Homo sapiens

text: HCPEpiC


text: ENCODE DCC

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: ATCC

text: neuroblastoma cell line differentiated w/ retinoic acid

text: cancer

text: SK-N-MC was isolated in September of l971 and was found to have moderate dopamine - beta - hydroxylase activity as well as formaldehyde induced fluorescence indicative of intracellular catecholamines. - ATCC

text: Human

characteristic: cell organism

text: F

characteristic: cell sex

text: Homo sapiens

characteristic: organism


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission package

text: ATCC

text: leukemia

text: cancer

characteristic: cell karyotype

text: The continuous cell line K-562 was established by Lozzio and Lozzio from the pleural effusion of a 53-year-old female with chronic myelogenous leukemia in terminal blast crises. - ATCC

text: Human

text: F

text: Homo sapiens


text: ENCODE DCC

characteristic: INSDC first public

text: live

text: Generic

text: Coriell

text: lymphoblastoid (CEPH)

text: relatively normal

text: CEPH/Utah - European Caucasion; Epstein-Barr Virus

text: Human

text: F

text: Homo sapiens

characteristic: title


text: ENCODE DCC

characteristic: INSDC last update

text: live

text: Generic

characteristic: SRA accession

text: primary human Th1 T cells

text: Human

text: U

text: Homo sapiens


text: ENCODE DCC

text: live

text: Generic

text: Lonza

characteristic: biomaterial provider

text: HMVEC-dBl-Ad

characteristic: cell

text: adult blood microvascular endothelial cells, dermal-derived

text: normal

text: mesoderm

text: human

text: F

text: DnaseDgf

characteristic: datatype

text: DNase Digital Footprinting

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labversion

text: Homo sapiens

text: HMVEC-dBl-Ad


text: IPMC/CNRS

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: hMADS

characteristic: cell type

text: Homo sapiens

characteristic: rin number

text: hMADS3 AD0

text: hMADS3 AD0 (1) Adapter A


characteristic: External Id

text: IPMC/CNRS

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission package

text: hMADS

text: Homo sapiens

characteristic: organism

text: hMADS3 AD0

text: hMADS3 AD0 (2) Adapter A


text: IPMC/CNRS

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: SRA accession

text: hMADS

text: Homo sapiens

text: hMADS3 AD3

text: hMADS3 AD3 (1) Adapter A

characteristic: title


text: IPMC/CNRS

text: live

text: Generic

text: hMADS

text: Homo sapiens

text: hMADS3 AD3

text: hMADS3 AD3 (2) Adapter A


text: IPMC/CNRS

text: live

text: Generic

text: hMADS

text: Homo sapiens

text: hMADS3 AD8

text: hMADS3 AD8 (1) Adapter A


text: IPMC/CNRS

text: live

text: Generic

text: hMADS

text: Homo sapiens

text: hMADS3 AD8

text: hMADS3 AD8 (2) Adapter A


text: IPMC/CNRS

text: live

text: Generic

text: hMADS

text: Homo sapiens

text: hMADS3 AD0

text: hMADS3 AD0 (1) Adapter B


text: IPMC/CNRS

text: live

text: Generic

text: hMADS

text: Homo sapiens

text: hMADS3 AD0

text: hMADS3 AD0 (2) Adapter B


text: IPMC/CNRS

text: live

text: Generic

text: hMADS

text: Homo sapiens

text: hMADS3 AD3

text: hMADS3 AD3 (1) Adapter B


text: IPMC/CNRS

text: live

text: Generic

text: hMADS

text: Homo sapiens

text: hMADS3 AD3

text: hMADS3 AD3 (2) Adapter B


text: IPMC/CNRS

text: live

text: Generic

text: hMADS

text: Homo sapiens

text: hMADS3 AD8

text: hMADS3 AD8 (1) Adapter B


text: IPMC/CNRS

text: live

text: Generic

text: hMADS

text: Homo sapiens

text: hMADS3 AD8

text: hMADS3 AD8 (2) Adapter B


text: Cold Spring Harbor Laboratory

text: live

text: Generic

text: Single cells isolated and from the metastatic liver tumor T16M and sequenced at low coverage (~6%). This sample is matched to the primary breast tumor T16P.

characteristic: description

text: Homo sapiens

text: T16M Metastatic Liver Tumor


Experiment 1

text: New York University

text: live

text: Generic

text: Single barcode

text: Saccharomyces cerevisiae


Experiment 2

text: New York University

text: live

text: Generic

text: Saccharomyces cerevisiae


Experiment 3

text: New York University

text: live

text: Generic

text: PCR 30 cycles

text: Saccharomyces cerevisiae


Experiment 4

text: New York University

text: live

text: Generic

text: PCR 25 cycles

text: Saccharomyces cerevisiae


text: New York University

text: live

text: Generic

text: PCR 20 cycles

text: Saccharomyces cerevisiae


Experiment 6

text: New York University

text: live

text: Generic

text: PCR 15 cycles

text: Saccharomyces cerevisiae


Experiment 7

text: New York University

text: live

text: Generic

text: Saccharomyces cerevisiae


Experiment 8

text: New York University

text: live

text: Generic

text: Unselected pool 1

text: Saccharomyces cerevisiae


Experiment 9

text: New York University

text: live

text: Generic

text: Unselected pool 2

text: Saccharomyces cerevisiae


Experiment 10

text: New York University

text: live

text: Generic

text: Phosphate starvation t = 0hr

text: Saccharomyces cerevisiae


Experiment 11

text: New York University

text: live

text: Generic

text: Phosphate starvation t = 24hr

text: Saccharomyces cerevisiae


Experiment 12

text: New York University

text: live

text: Generic

text: Phosphate starvation t = 48hr

text: Saccharomyces cerevisiae


Experiment 13

text: New York University

text: live

text: Generic

text: Phosphate starvation t = 72hr

text: Saccharomyces cerevisiae


Experiment 14

text: New York University

text: live

text: Generic

text: Phosphate starvation t = 99hr

text: Saccharomyces cerevisiae


Experiment 15

text: New York University

text: live

text: Generic

text: Phosphate starvation t = 144hr

text: Saccharomyces cerevisiae


Experiment 16

text: New York University

text: live

text: Generic

text: Phosphate starvation t = 267hr

text: Saccharomyces cerevisiae


Experiment 17

text: New York University

text: live

text: Generic

text: Phosphate starvation t = 473hr

text: Saccharomyces cerevisiae


Experiment 18

text: New York University

text: live

text: Generic

text: Leucine starvation t = 0hr

text: Saccharomyces cerevisiae


Experiment 19

text: New York University

text: live

text: Generic

text: Leucine starvation t = 24hr

text: Saccharomyces cerevisiae


Experiment 20

text: New York University

text: live

text: Generic

text: Leucine starvation t = 48hr

text: Saccharomyces cerevisiae


Experiment 21

text: New York University

text: live

text: Generic

text: Leucine starvation t = 72hr

text: Saccharomyces cerevisiae


Experiment 22

text: New York University

text: live

text: Generic

text: Leucine starvation t = 99hr

text: Saccharomyces cerevisiae


Experiment 23

text: New York University

text: live

text: Generic

text: Leucine starvation t = 99hr

text: Saccharomyces cerevisiae


Experiment 24

text: New York University

text: live

text: Generic

text: Leucine starvation t = 267hr

text: Saccharomyces cerevisiae


Experiment 25

text: New York University

text: live

text: Generic

text: Leucine starvation t = 473hr

text: Saccharomyces cerevisiae


Athhet litter Nov 2010

text: Harvard University

text: live

text: Generic

text: Amanita thiersii Skay4041

text: Amanita thiersii litter transcriptome November 2010


leaf poly(A) tags

text: University of Kentucky

text: live

text: Generic

text: This sample consists of cDNA tags that query the mRNA-poly(A) junction, prepared using RNA isolated from Arabidopsis leaf tissue. Plants were grown in a growth room in soil or hydroponically and leaf tissue harvested after 17-20 days. cDNA was prepared and the desired tags made as described in Wu et al. (submitted). These paired-end tags are bar-coded and mixed with other samples in the various experiments. Wild-type leaf tags have the following codes: 5' reads begin with either CATG or ACGT, and 3' reads begin with the sequence NNNCCTTTT. These codes can be used to extract leaf tags for analysis.

text: Arabidopsis thaliana

text: poly(A) tags from Arabidopsis leaf tissue


Taxus mairei RNA-seq

text: Dalian Jiaotong University

text: live

text: Generic

text: Leaf was collected from a cultivated Taxus mairei of two years old. Total RNA was isolated with TRIzol (Invitrogen) according to the manufacturer's instructions. It was treated with RNase-free DNase I for 30 min at 37*C (New England BioLabs) to remove residual DNA. Beads with oligo(dT) were used to isolate poly(A) mRNA after total RNA was collected from Taxus tissues. Fragmentation buffer was added for interrupting mRNA to short fragments. Taking these short fragments as templates, Random hexamer-primer were used to synthesize the first-strand cDNA. The second-strand cDNA was synthesized using buffer, dNTPs, RNase H and DNA polymerase I, respectively. Short fragments were purified with QiaQuick PCR extraction kit and resolved with EB buffer for end repair and adding poly(A). After that, the short fragments were connected with sequencing adapters. For amplification with PCR, we selected suitable fragments as templates, with respect to the result of agarose gel electrophoresis. At last, the library was sequenced using Illumina GA IIX.

text: Taxus mairei

text: Illumina RNA-seq results of gymnosperm Taxus mairei


Taxus mairei DGE

text: Dalian Jiaotong University

text: live

text: Generic

text: Taxus mairei

text: Illumina DGE results of Taxus mairei


text: Yonsei University

text: live

text: Generic

text: sediment metagenome

text: Novel Biphenyl Oxidizing Bacteria and Dioxygenase Genes from a Korean Tidal Mudflat


text: Bielefeld University

text: live

text: Generic

text: Amphibalanus amphitrite

text: Balanus amphitrite larvae


text: Bielefeld University

text: live

text: Generic

text: Amphibalanus amphitrite

text: Balanus amphitrite Cyprids day three


text: Bielefeld University

text: live

text: Generic

text: Amphibalanus amphitrite

text: Balanus amphitrite adult


text: IGDB

text: live

text: Generic

characteristic: cultivar

text: 15 days after flowering

characteristic: developmental stage

text: Glycine max

text: soybean seed

text: seed

characteristic: tissue


FGSC 8783

text: UC Berkeley

characteristic: INSDC secondary accession

text: live

text: Generic

text: FGSC 8783/D23

text: Neurospora crassa

text: FGSC 8783


FGSC 8784

text: UC Berkeley

text: live

characteristic: INSDC status

text: Generic

text: FGSC 8784/D24

text: Neurospora crassa

text: FGSC 8784


FGSC 8787

text: UC Berkeley

text: live

text: Generic

characteristic: NCBI submission model

text: FGSC 8787/D27

text: Neurospora crassa

text: FGSC 8787


FGSC 8789

text: UC Berkeley

text: live

text: Generic

text: FGSC 8789/D29

text: Neurospora crassa

text: FGSC 8789


FGSC 8790

text: UC Berkeley

text: live

text: Generic

text: FGSC 8790/D30

text: Neurospora crassa

text: FGSC 8790


FGSC 8816

text: UC Berkeley

text: live

text: Generic

text: FGSC 8816/D56

text: Neurospora crassa

text: FGSC 8816


FGSC 8819

text: UC Berkeley

text: live

text: Generic

text: FGSC 8819/D59

text: Neurospora crassa

text: FGSC 8819


text: State Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology

text: live

text: Generic

characteristic: background variety

text: wild-type

characteristic: genotype/variation

text: Oryza sativa

text: young panicles (4cm)

text: panicle

text: Oryza sativa L. ssp. japonica zhonghua11_HT panicle sRNA


characteristic: External Id

text: live

text: Generic

text: rdr701-1 mutant

text: Oryza sativa

text: young panicles (4cm)

text: panicle

text: Oryza sativa L. ssp. japonica rdr701-1_HT panicle sRNA


characteristic: INSDC center name

text: live

text: Generic

text: wild-type

text: Oryza sativa

text: young panicles (4cm)

text: panicle

text: Oryza sativa L. ssp. japonica zhonghua11_LT panicle sRNA


text: live

text: Generic

characteristic: NCBI submission package

text: rdr701-1 mutant

text: Oryza sativa

text: young panicles (4cm)

text: panicle

text: Oryza sativa L. ssp. japonica rdr701-1_LT panicle sRNA


text: University of Kentucky

text: live

text: Generic

text: This sample consists of cDNA tags that query the mRNA-poly(A) junction, prepared using RNA isolated from dry Arabidopsis seeds. cDNA was prepared and the desired tags made as described in Wu et al. (submitted). These paired-end tags are bar-coded and mixed with other samples in the various experiments. Wild-type leaf tags have the following codes: 5' reads begin with either CCCATG or CCACGT, and 3' reads begin with the sequence NNNGCTTTT (for tags in the AHQL2 sample) or NNNGGTTTT (for tags in the AHBD2 sample). These codes can be used to extract seed tags for analysis.

text: Arabidopsis thaliana

characteristic: organism

text: seed poly(A) tags


FGSC 8845

text: UC Berkeley

characteristic: INSDC first public

text: live

text: Generic

text: FGSC 8845/D85

text: Neurospora crassa

text: FGSC 8845


FGSC 8848

text: UC Berkeley

characteristic: INSDC last update

text: live

text: Generic

text: FGSC 8848/D88

text: Neurospora crassa

text: FGSC 8848


FGSC 8850

text: UC Berkeley

text: live

text: Generic

characteristic: SRA accession

text: FGSC 8850/D90

text: Neurospora crassa

text: FGSC 8850


FGSC 8851

text: UC Berkeley

text: live

text: Generic

text: FGSC 8851/D91

text: Neurospora crassa

text: FGSC 8851

characteristic: title


FGSC 851

text: UC Berkeley

text: live

text: Generic

text: FGSC 851/JW1

characteristic: description

text: Neurospora crassa

text: FGSC 851


FGSC 1131

text: UC Berkeley

text: live

text: Generic

text: FGSC 1131/JW3

text: Neurospora crassa

text: FGSC 1131


Savage 23-purple

text: Santa Clara University

text: live

text: Generic

text: Petal tissue from a pool of identically colored individuals at Savage River, Denali National Park, Alaska. Samples are from the young bud developmental stage.

text: Parrya nudicaulis

text: Savage 23-purple colored petals


Savage 30-white

text: Santa Clara University

text: live

text: Generic

text: Parrya nudicaulis

text: Savage 30-white colored petals


12 mile 8-purple

text: Santa Clara University

text: live

text: Generic

text: Petal tissue from a pool of identically colored individuals at 12 Mile Summit, Fairbanks, Alaska. Samples are from the late bud developmental stage.

text: Parrya nudicaulis

text: 12 Mile Summit 8-purple colored petals


12 mile 15

text: Santa Clara University

text: live

text: Generic

text: Parrya nudicaulis

text: 12 Mile Summit 15-white colored petals


name: Caenorhabditis elegans N2 early embryo RNA biological replicate EE-2

text: University of Washington Genome Sciences

text: live

text: Generic

text: Early embryos bleached from C. elegans N2 gravid adults grown at 20 degrees. This sample is available through the modENCODE DCC (www.modencode.org) as: early_embryo_EE-2 This sample is a biological replicate for DCC project: early_embryo Local library name: N2_EE-2 Quality values are ASCII encoded Phred + 33 through GAPipeline1.8.

text: Caenorhabditis elegans


text: Yonsei University

text: live

text: Generic

text: sediment metagenome


name: Caenorhabditis elegans N2 early embryo array capture RNA biological replicate EE-2cap5

text: live

text: Generic

text: Early embryos bleached from C. elegans N2 gravid adults grown at 20 degrees. EE-2 library was subjected to array capture to remove messages already detected in other RNAseq experiments. This sample is available through the modENCODE DCC (www.modencode.org) as: early_embryo_capture_EE-2cap5 Local library name: N2_EE-2cap5 Quality values are ASCII encoded Phred + 33 through GAPipeline1.8.

text: Caenorhabditis elegans


name: Caenorhabditis elegans embryo him-8(e1480) RNA sample 2

text: live

text: Generic

text: C. elegans N2 him-8(e1480) embryos from worms grow at 20*C; about 50% of those embryos were males. This sample is available through the modENCODE DCC (www.modencode.org) as: embryo_him-8(e1480)_EmMalesHIM8-2 This sample is a biological replicate for DCC project: embryo_him-8(e1480)_20dC Local library name: EmMalesHIM8-2 Quality values are ASCII encoded Phred 33 through GAPipeline1.8.

text: Caenorhabditis elegans


name: Caenorhabditis elegans dauer exit daf-2(el370) RNA sample 2

text: live

text: Generic

text: C. elegans N2 dauer worms (91 hrs after culturing at 25°C) shifted to 15°C to allow recovering from dauer for 12hrs when there are about 24% worms are resistant to 1% SDS treatment. This sample is available through the modENCODE DCC (www.modencode.org) as: dauer_exit_daf-2(e1370)_25dC_91hrs_15dC_12hrs This sample is a biological replicate for DCC project: dauer_exit_daf-2(e1370)_25dC_91hrs_15dC_12hrs_post-L1 Local library name: DauerExitDAF2 Quality values are ASCII encoded Phred + 33 through GAPipeline1.8.

text: Caenorhabditis elegans


name: Caenorhabditis elegans strain JK1107 mid-L4 male soma only no DNaseI RNA sample 2

text: live

text: Generic

text: L4 animals with essentially no germ cells, and therefore considered a soma-only sample. From the strain JK1107, which carries the temperature sensitive glp-1(q224) allele that prevents germ cell proliferation at high temperatures of 25 C, at which these samples were isolated. These were not DNaseI treated. This sample is available through the modENCODE DCC (www.modencode.org) as: L4_soma_JK1107_no_DNaseI_L4JK1107soma-2 This sample is a biological replicate for DCC project: L4_soma_JK1107_no_DNaseI Local library name: L4JK1107soma-2 Quality values are ASCII encoded Phred + 33 through GAPipeline1.8.

text: Caenorhabditis elegans


text: University of Bergen/Dept. of Biology

text: live

text: Generic

text: 22 cm Push-core sample in G11 pockmark at Nyegga cold seeps

text: sediment metagenome

text: Stratification of anaerobic methanotrophs at Nyegga cold-seep sediment


fundyense

text: University of Oslo

text: live

text: Generic

text: Alexandrium fundyense strain CCMP1719 was obtained from the CCMP culture collection (https://ccmp.bigelow.org/) and grown in L1 media, at 16 *C, under a 12/12 light cycle, and a photon irradiance of ~100 mmol photons m-2 s-1. To isolate total RNA for 454-library construction the culture was harvested in exponential growth phase through centrifugation (1 min, 1000 x g, 12 *C). Cells were washed twice with PBS, exposed to bead-beating on dry ice with the Fast Prep bead-beater from Medinor (20 s, speed 4) using 1.4 mm beads (Medinor) and total RNA was extracted with the ChargeSwitch* Total RNA Cell kit (Invitrogen) according to the manufacturers’ protocol. Normalized polyA-enriched cDNA libraries with 454 adapters attached at each end were constructed commercially by Vertis Biotechnologie AG (http://www.vertis-biotech.com/). Adapter sequences were: GACCTTGGCTGTCACTCA (5') and TCGCAGTGAGTGACAGGCCA (3'). Two runs, a quarter of a plate each, were sequenced at the Norwegian High-Throughput Sequencing Centre (http://www.sequencing.uio.no/)using Roche 454 sequencing TITAN technology.

text: Alexandrium fundyense

text: A. fundyense CCMP1719 transcriptome


name: Radix balthica transcriptome - Illumina sequ

text: Biodiversity and Climate Research Centre

text: live

text: Generic

text: Radix balthica were caught from a small lake in Bavaria, Germany. Snails were maintained under varying conditions: different aeration, life stages, temperatures, feeding conditions, salinity and temperature shock treatments. Two individuals per treatment were selected for RNA extraction.

text: Ampullaceana balthica


minutum

text: University of Oslo

text: live

text: Generic

text: Alexandrium minutum strain CCMP113 was obtained from the CCMP culture collection (https://ccmp.bigelow.org/) and grown in L1 media, at 16 *C, under a 12/12 light cycle, and a photon irradiance of ~100 mmol photons m-2 s-1. To isolate total RNA for 454-library construction the culture was harvested in exponential growth phase through centrifugation (1 min, 1000 x g, 12 *C). Cells were washed twice with PBS, exposed to bead-beating on dry ice with the Fast Prep bead-beater from Medinor (20 s, speed 4) using 1.4 mm beads (Medinor) and total RNA was extracted with the ChargeSwitch* Total RNA Cell kit (Invitrogen) according to the manufacturers’ protocol. Normalized polyA-enriched cDNA libraries with 454 adapters attached at each end were constructed commercially by Vertis Biotechnologie AG (http://www.vertis-biotech.com/). Adapter sequences were: GACCTTGGCTGTCACTCA (5') and TCGCAGTGAGTGACAGGCCA (3'). Two runs, a quarter of a plate each, were sequenced at the Norwegian High-Throughput Sequencing Centre (http://www.sequencing.uio.no/)using Roche 454 sequencing TITAN technology.

text: Alexandrium minutum

text: Alexandrium minutum CCMP113 transcriptome


text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus aureus 21172

characteristic: strain

text: Generic sample from Staphylococcus aureus subsp. aureus 21172


name: Caenorhabditis elegans N2 larval L1 RNA biological replicate L1-1

text: live

text: Generic

text: C. elegans N2 synchronized L1s from O/N hatching of embryos grown on food for 4hrs and then put those L1s into supplemented S-basal for another hour. This sample is available through the modENCODE DCC (www.modencode.org) as: larva_L1-1 Local library name: N2_L1-1 Quality values are ASCII encoded Phred + 33 through GAPipeline1.8.

text: Caenorhabditis elegans


text: University of Calgary

text: live

text: Generic

text: Albian enrichment culture #12; unammended control, A-U

text: hydrocarbon metagenome

text: Prokaryotic diversity in Albian enrichment culture #12; unammended control


FGSC 1133

text: UC Berkeley

text: live

text: Generic

text: FGSC 1133/JW5

text: Neurospora crassa

text: FGSC 1133


FGSC 1165

text: UC Berkeley

text: live

text: Generic

text: FGSC 1165/JW7

text: Neurospora crassa

text: FGSC 1165


FGSC 2229

text: UC Berkeley

text: live

text: Generic

text: FGSC 2229/JW9

text: Neurospora crassa

text: FGSC 2229


FGSC 2229b

text: UC Berkeley

text: live

text: Generic

text: FGSC 2229b/JW10

text: Neurospora crassa

text: FGSC 2229b


FGSC 1132

text: UC Berkeley

text: live

text: Generic

text: FGSC 1132/JW15

text: Neurospora crassa

text: FGSC 1132


FGSC 3223

text: UC Berkeley

text: live

text: Generic

text: FGSC 3223/JW22

text: Neurospora crassa

text: FGSC 3223


text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus aureus 21178

text: Generic sample from Staphylococcus aureus subsp. aureus 21178


FGSC 3968

text: UC Berkeley

text: live

text: Generic

text: FGSC 3968/JW28

text: Neurospora crassa

text: FGSC 3968


FGSC 3975

text: UC Berkeley

text: live

text: Generic

text: FGSC 3975/JW35

text: Neurospora crassa

text: FGSC 3975


FGSC 4708

text: UC Berkeley

text: live

text: Generic

text: FGSC 4708/JW39

text: Neurospora crassa

text: FGSC 4708


FGSC 4712

text: UC Berkeley

text: live

text: Generic

text: FGSC 4712/JW43

text: Neurospora crassa

text: FGSC 4712


text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus aureus 21189

text: Generic sample from Staphylococcus aureus subsp. aureus 21189


FGSC 4713

text: UC Berkeley

text: live

text: Generic

text: FGSC 4713/JW45

text: Neurospora crassa

text: FGSC 4713


FGSC 4715

text: UC Berkeley

text: live

text: Generic

text: FGSC 4715/JW47

text: Neurospora crassa

text: FGSC 4715


text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus aureus 21193

text: Generic sample from Staphylococcus aureus subsp. aureus 21193


FGSC 4716

text: UC Berkeley

text: live

text: Generic

text: FGSC 4716/JW49

text: Neurospora crassa

text: FGSC 4716


FGSC 4730

text: UC Berkeley

text: live

text: Generic

text: FGSC 4730/JW52

text: Neurospora crassa

text: FGSC 4730


FGSC 4824

text: UC Berkeley

text: live

text: Generic

text: FGSC 4824/JW54

text: Neurospora crassa

text: FGSC 4824


FGSC 5910

text: UC Berkeley

text: live

text: Generic

text: FGSC 5910/JW56

text: Neurospora crassa

text: FGSC 5910


text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus aureus 21194

text: Generic sample from Staphylococcus aureus subsp. aureus 21194


text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus aureus 21195

text: Generic sample from Staphylococcus aureus subsp. aureus 21195


text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus aureus 21196

text: Generic sample from Staphylococcus aureus subsp. aureus 21196


text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus aureus 21200

text: Generic sample from Staphylococcus aureus subsp. aureus 21200


text: Washington University, Genome Sequencing Center

text: live

text: Generic

text: Sample Type : genomic dna

text: Crithidia fasciculata

text: Generic sample from Crithidia fasciculata


text: Baylor College of Medicine

text: live

text: MIGS.ba

text: Newbler v. 2.0.0-Eclipse

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

text: Helicobacter pylori 83

characteristic: estimated size

text: Homo sapiens-associated habitat [ENVO:00009003]

characteristic: feature

text: Level 6: Finished38.3x

characteristic: finishing strategy (depth of coverage)

text: not determined

characteristic: geo loc name

characteristic: host taxid

text: not determined

text: not determined

characteristic: lat lon

text: biological product [ENVO:02000043]

characteristic: material

text: Stomach

characteristic: misc_param: HMP body site

characteristic: misc_param: HMP supersite

text: not determined

characteristic: nucleic acid extraction

text: not determined

text: Helicobacter pylori 83

text: Helicobacter pylori 83

characteristic: project name

text: Reference Genome

text: not determined

characteristic: sequencing method

characteristic: sop

text: BEI HM-273

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Helicobacter pylori 83


characteristic: External Id

text: Broad Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: organism

characteristic: sample name

characteristic: strain

text: Generic sample from Lachnospiraceae bacterium ORNL_2UT_Ab5152_163

characteristic: title


text: Broad Institute

text: live

text: Generic

text: Generic sample from Lachnospiraceae bacterium ORNL_2UT_Ab5152_165


text: Broad Institute

text: live

text: Generic

text: Generic sample from Lachnospiraceae bacterium ORNL_2UT_Ab5152_166


text: Broad Institute

text: live

text: Generic

text: Generic sample from Lachnospiraceae bacterium ORNL_2UT_Ab5152_168


text: Broad Institute

text: live

text: Generic

text: Generic sample from Lachnospiraceae bacterium ORNL_2UT_Ab5152_169


PRJNA39969.TN 11347

text: Broad Institute

text: live

text: Generic

text: Mycobacterium tuberculosis W-148

text: TN 11347

text: Generic sample from Mycobacterium tuberculosis W-148


text: Broad Institute

text: live

text: Generic

text: Generic sample from Lachnospiraceae bacterium ORNL_2UT_Ab5152_170


text: Baylor College of Medicine

text: live

text: MIGS.ba

text: Newbler v. 2.0-011609

characteristic: assembly

text: terrestrial biome [ENVO:00000446]

characteristic: biome

text: not determined

characteristic: collection date

characteristic: culture-collection

text: Erysipelothrix rhusiopathiae ATCC 19414

characteristic: description

characteristic: estimated size

characteristic: feature

text: Level 6: Finished36.22x;4

characteristic: finishing strategy (depth of coverage)

text: not determined

characteristic: geo loc name

characteristic: host taxid

text: not determined

text: not determined

characteristic: lat lon

text: biological product [ENVO:02000043]

characteristic: material

text: not determined

characteristic: misc_param: HMP body site

text: skin

characteristic: misc_param: HMP supersite

text: not determined

characteristic: nucleic acid extraction

text: not determined

text: Erysipelothrix rhusiopathiae ATCC 19414

text: Erysipelothrix rhusiopathiae ATCC 19414

characteristic: project name

text: Reference Genome

text: not determined

text: ATCC 19414

text: Homo sapiens

text: ATCC 19414

text: MIGS Cultured Bacterial/Archaeal sample from Erysipelothrix rhusiopathiae ATCC 19414


name: 1127965694067 Staphylococcus aureus IS-3 153-RLB-RL027-01-763 Sample

characteristic: External Id

text: J. Craig Venter Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Total DNA isolated from Staphylococcus aureus IS-3

characteristic: organism

characteristic: strain

text: Generic sample from Staphylococcus aureus subsp. aureus IS-3

characteristic: title


text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus aureus IS-278

characteristic: description

text: Generic sample from Staphylococcus aureus subsp. aureus IS-278


text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus aureus IS-250

text: Staphylococcus epidermidis IS-250

text: Generic sample from Staphylococcus aureus subsp. aureus IS-250


text: University of Calgary

text: live

text: Generic

text: hydrocarbon metagenome

text: Prokaryotic diversity in Albian enrichment culture #4; ammended with 200 ppm citrate, 2% Albian diluent and 100 ppm polyacrylamide, A.Cit


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 1SyMT1Ny

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 1SyMT1Ny


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 5SyMT1Sc

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 5SyMT1Sc


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 9SyMT1Lc

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 9SyMT1Lc


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 12SyMToLc

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 12SyMToLc


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 13SyMT1Bx

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 13SyMT1Bx


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 14SyMT1Tol

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 14SyMT1Tol


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 17SyMT0Bx

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 17SyMT0Bx


name: 1127994694035 Staphylococcus aureus IS-88 1588-RLB-RL030-01-743 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus aureus IS-88

text: Generic sample from Staphylococcus aureus subsp. aureus IS-88


text: Broad Institute

text: live

text: Generic

text: Mycobacterium tuberculosis H37Rv

characteristic: sample name

text: Generic sample from Mycobacterium tuberculosis H37Rv


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 20SuT0Cont

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 20SuT0Cont


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 21SuT0Ny

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 21SuT0Ny


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 22SuT0Sc

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 22SuT0Sc


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 23SuT0Lc

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 23SuT0Lc


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 24SuT0Bx

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 24SuT0Bx


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 25SyWT0Cont

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 25SyWT0Cont


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 26SyWT0Ny

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 26SyWT0Ny


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 27SyWT0Sc

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 27SyWT0Sc


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 28SyWT0Lc

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 28SyWT0Lc


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 29SyWT0Bx

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 29SyWT0Bx


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 30SyMT2Ny

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 30SyMT2Ny


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 31SyMFT2Ny ST

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 31SyMFT2Ny ST


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 32SyMFT2Ny M

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 32SyMFT2Ny M


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 38SyMT2Sc

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 38SyMT2Sc


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 39SyMT2Sc StM

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 39SyMT2Sc StM


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 40SyMT2Sc M

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 40SyMT2Sc M


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 52SyMT0Ny M20

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 52SyMT0Ny M20


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 53SyMT0Sc M20

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 53SyMT0Sc M20


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 55SyMT2Bx

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 55SyMT2Bx


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 56SyMT1BxM20

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 56SyMT1BxM20


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 58SyMT1BxStM

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 58SyMT1BxStM


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 65SyMT0Bx

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 65SyMT0Bx


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 69SyMT3Sc

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 69SyMT3Sc


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 84Sy31T0noHC

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 84Sy31T0noHC


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 87Sy31T0iso

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 87Sy31T0iso


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 90Sy31T0Ny

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 90Sy31T0Ny


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 119SyMT0Cont

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 119SyMT0Cont


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 120SyMT0Bx

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 120SyMT0Bx


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 121SyMT0Ny

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 121SyMT0Ny


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 122SyMT0Sc

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 122SyMT0Sc


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 123SyMT0Lc

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 123SyMT0Lc


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 124SyMT0AlSc

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 124SyMT0AlSc


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 125SyMT0Iso

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 125SyMT0Iso


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 10SyMT1Lc

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 10SyMT1Lc


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 10SyMT1LCt0

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 10SyMT1LCt0


text: University of Calgary

text: live

text: Generic

text: Enrichment culture 19SyMT0Contt0

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 19SyMT0Contt0


text: University of Calgary

text: live

text: Generic

text: enrichment culture 8-1

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 8-1


text: University of Calgary

text: live

text: Generic

text: enrichment culture 8-4

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 8-4


text: University of Calgary

text: live

text: Generic

text: enrichment culture 8-11

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 8-11


text: University of Calgary

text: live

text: Generic

text: enrichment culture 8-13

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 8-13


text: University of Calgary

text: live

text: Generic

text: enrichment culture 8-18

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 8-18


text: University of Calgary

text: live

text: Generic

text: enrichment culture 8-19

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 8-19


text: University of Calgary

text: live

text: Generic

text: enrichment culture 8-21

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 8-21


text: University of Calgary

text: live

text: Generic

text: enrichment culture 8-25

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 8-25


text: University of Calgary

text: live

text: Generic

text: enrichment culture 12-3

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 12-3


text: University of Calgary

text: live

text: Generic

text: enrichment culture 12-5

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 12-5


text: University of Calgary

text: live

text: Generic

text: enrichment culture 12-7

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 12-7


text: University of Calgary

text: live

text: Generic

text: enrichment culture 19SyMT0Cont

text: hydrocarbon metagenome

text: Prokaryotic diversity in enrichment culture 19SyMT0Cont


text: PICB

text: live

text: Generic

text: Sample was prepared from the frontal part of the superior frontal gyrus of postmortem brains of 5 humans (from 1 to 35 days, 3 males and 2 females) by pooling equal quantities of total RNA. Samples were obtained from the NICHD Brain and Tissue Bank for Developmental Disorders at the University of Maryland, USA, the Netherlands Brain Bank, Amsterdam, Netherlands and the Chinese Brain Bank Center, Wuhan, China. Informed consent for use of human tissues for research was obtained in writing from all donors or from their next of kin. All subjects were defined as normal by forensic pathologists at the corresponding brain bank. All subjects suffered sudden death with no prolonged agonal state. All samples contained an approximately 2:1 gray matter to white matter volume ratio.

text: Homo sapiens

text: hs, 76nt, s1, ctx


text: Research Institute of Physico-Chemical Medicine

text: live

text: Generic

text: Sample was prepared from the frontal part of the superior frontal gyrus of postmortem brains of 5 humans (from 16 to 20 years, 4 males and 1 females) by pooling equal quantities of total RNA. Samples were obtained from the NICHD Brain and Tissue Bank for Developmental Disorders at the University of Maryland, USA, the Netherlands Brain Bank, Amsterdam, Netherlands and the Chinese Brain Bank Center, Wuhan, China. Informed consent for use of human tissues for research was obtained in writing from all donors or from their next of kin. All subjects were defined as normal by forensic pathologists at the corresponding brain bank. All subjects suffered sudden death with no prolonged agonal state. All samples contained an approximately 2:1 gray matter to white matter volume ratio.

text: Homo sapiens

text: hs, 76nt, s4, ctx


C24 RRIM600 Latex RNASeq

text: Malaysia Genome Institute

text: live

text: Generic

text: Hevea brasiliensis

text: Latex transcriptome of the Hevea brasiliensis rubber tree


ST-ANAE

text: The University of Hong Kong

text: live

text: Generic

text: Anaerobic digestion sludge from Sha Tin Hong Kong China

text: bioreactor sludge metagenome

text: ST-ANAE


SWH-ANAE

text: The University of Hong Kong

text: live

text: Generic

text: Anaerobic digestion sludge from Shek Wu Hui Hong Kong China

text: bioreactor sludge metagenome

text: SWH-ANAE


ST-Influent

text: The University of Hong Kong

text: live

text: Generic

text: Influent from Sha Tin Hong Kong China

text: bioreactor sludge metagenome

text: ST-Influent


ST-Effluent

text: The University of Hong Kong

text: live

text: Generic

text: Effluent from Sha Tin Hong Kong China

text: bioreactor sludge metagenome

text: ST-Effluent


Default

text: The University of Hong Kong

text: live

text: Generic

text: Default sample.

text: bioreactor sludge metagenome

text: Default


text: Department of Botany and Plant Sciences, University of California, Riverside

text: live

text: Generic

text: Vigna unguiculata

text: adult plants

text: leaves

characteristic: tissue

text: control

characteristic: treatment


text: live

text: Generic

text: Vigna unguiculata

text: adult plants

text: leaves

text: drought


name: 1127981694044 Staphylococcus aureus IS-91 1591-RLB-RL031-01-619 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus aureus IS-91

text: Generic sample from Staphylococcus aureus subsp. aureus IS-91


name: 1127981694052 Staphylococcus aureus IS-99 1599-RLB-RL032-01-677 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Staphylococcus aureus IS-99

text: Generic sample from Staphylococcus aureus subsp. aureus IS-99


text: Department of Molecular Biology (274), Radboud University

text: live

text: Generic

text: preimmune serum (preV27)

characteristic: antibody

characteristic: cell line

text: Homo sapiens

text: Chromatin IP with preimmune serum (control for PRAME ChIP)


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: PRAME (V27/S6)

text: Homo sapiens

text: Chromatin IP with PRAME serum


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: NFYA (Santa Cruz H-209 sc-10779, Lot D2408)

text: Homo sapiens

text: Chromatin IP with NFYA Ab


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: NFYB (Diagenode pAb-007-100, Lot TF-0010)

text: Homo sapiens

text: Chromatin IP with NFYB Ab


text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Homo sapiens

text: Gene expression analysis on poly(A)+ RNA


text: J. Craig Venter Institute

text: live

text: Generic

characteristic: SRA accession

text: Total DNA isolated from Staphylococcus aureus IS-157

characteristic: organism

text: Generic sample from Staphylococcus aureus subsp. aureus IS-157


text: Shi Lab, M&G, University of California, Irvine

text: live

text: Generic

text: HeLa

text: Homo sapiens

text: HeLa cell

text: HeLa-PASSeq

characteristic: title


text: live

text: Generic

text: embryonic stem cells

characteristic: cell type

text: Mus musculus

text: Mouse embryonic stem cells

text: ES-PASSeq


text: live

text: Generic

text: neural stem/progenitor cells

text: Mus musculus

text: Mouse neural stem/progenitor cells

text: NSP-PASSeq


text: live

text: Generic

text: neurons

text: Mus musculus

text: Mouse neurons

text: Neuron-PASSeq


text: Virginia L. Clark, Microbilogy and Immunology, University of Rochester

text: live

text: Generic

characteristic: condition

text: wild-type

characteristic: genotype

text: Neisseria gonorrhoeae F62

characteristic: strain


text: Institute of Immunology, PLA, Third Military Medical University

text: live

text: Generic

text: Treg cells

characteristic: chip antibody

text: Abcam

characteristic: chip antibody vendor

text: male

characteristic: gender

text: Homo sapiens

text: Treg cells from PBMC, normal


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: aTconv cells

text: Abcam

text: male

text: Homo sapiens

text: aTconv cells from PBMC, normal


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: aTconv cells

text: IgG

text: Upstate

text: male

text: Homo sapiens

text: aTconv cells from PBMC, normal

text: aTconv-IgG


text: Duncan Cancer Center, Baylor College of Medicine

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: growth temperature

text: 5 min

characteristic: mnase digestion time

text: Saccharomyces cerevisiae

text: yeast culture, partial digestion

text: Wild type partial digestion, rep1


text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: 25 min

text: Saccharomyces cerevisiae

characteristic: organism

text: yeast culture, complete digestion

text: Wild type complete digestion, rep1


text: live

text: Generic

text: 5 min

text: Saccharomyces cerevisiae

text: yeast culture, partial digestion

text: Wild type partial digestion, rep2

characteristic: title


text: live

text: Generic

text: 25 min

text: Saccharomyces cerevisiae

text: yeast culture, complete digestion

characteristic: strain

text: Wild type complete digestion, rep2


text: live

text: Generic

text: 5 min

text: Saccharomyces cerevisiae

text: yeast culture, heat shock, partial digestion

text: Heat shock partial digestion, rep1


text: live

text: Generic

text: 25 min

text: Saccharomyces cerevisiae

text: yeast culture, heat shock, complete digestion

text: Heat shock complete digestion, rep1


text: live

text: Generic

text: 5 min

text: Saccharomyces cerevisiae

text: Heat shock partial digestion, rep2


text: live

text: Generic

text: 25 min

text: Saccharomyces cerevisiae

text: Heat shock complete digestion, rep2


text: live

text: Generic

text: 5 min

text: Saccharomyces cerevisiae

text: yeast culture, cross-linking, partial digestion

text: Cross-linking partial digestion

text: formaldehyde cross-linking

characteristic: treatment


text: live

text: Generic

text: 25 min

text: Saccharomyces cerevisiae

text: yeast culture, cross-linking, complete digestion

text: Cross-linking complete digestion

text: formaldehyde cross-linking


text: University of Calgary

text: live

text: Generic

text: Tailing sample from WIP tailing pond W09-08 (north site) 8.5m below surface, WN8.5

characteristic: description

text: hydrocarbon metagenome

text: Prokaryotic diversity at WIP location W09-08 (north site) 8.5m below surface, WN8.5


text: University of Calgary

text: live

text: Generic

text: Tailing sample from WIP tailing pond, W09-08 (north site) 13.5m below surface, WN13.5

text: hydrocarbon metagenome

text: Prokaryotic diversity at WIP location W09-08 (north site) 13.5m below surface, WN13.5


text: University of Calgary

text: live

text: Generic

text: Tailing sample from WIP tailing pond, W09-08 (north site) 18.5m below surface, WN18.5

text: hydrocarbon metagenome

text: Prokaryotic diversity at WIP location W09-08 (north site) 18.5m below surface, WN18.5


text: University of Calgary

text: live

text: Generic

text: Tailing sample from WIP tailing pond, W09-08 (north site)23.5m below surface, WN23.5

text: hydrocarbon metagenome

text: Prokaryotic diversity at WIP location W09-08 (north site) 23.5m below surface, WN23.5


text: University of Calgary

text: live

text: Generic

text: Tailing sample from WIP tailing pond, W09-08 (north site) 28.5m below surface, WN28.5

text: hydrocarbon metagenome

text: Prokaryotic diversity at WIP location W09-08 (north site) 28.5m below surface, WN28.5


text: University of Calgary

text: live

text: Generic

text: Tailing sample from WIP tailing pond, W09-08 (north site) 33.5m below surface, WN33.5

text: hydrocarbon metagenome

text: Prokaryotic diversity at WIP location W09-08 (north site) 33.5m below surface, WN33.5


name: Calliarthron tuberculosum partial genome data

text: Rutgers University

text: live

text: Generic

text: Fresh thalli of the coralline red alga Calliarthron tuberculosum were collected from the low intertidal zone at Botanical Beach Provincial Park on Vancouver Island, British Columbia, Canada. Sample collection and library construction was done at the University of British Columbia by Patrick Martone. More details available from Chan CX, Yang EC, Banerjee T, Yoon HS, Martone PT, Estevez JM, Bhattacharya D (2011). Current Biology, accepted Jan 13.

text: Calliarthron tuberculosum


text: University of Calgary

text: live

text: Generic

text: Tailing sample from WIP tailing pond, W09-07 (central site) 8.6m below surface, WM8.6

text: hydrocarbon metagenome

text: Prokaryotic diversity at WIP location W09-07 (central site) 8.6m below surface, WM8.6


text: University of Calgary

text: live

text: Generic

text: Tailing sample from WIP tailing pond, W09-07 (central site) 13.6m below surface, WM13.6

text: hydrocarbon metagenome

text: Prokaryotic diversity at WIP location W09-07 (central site) 13.6m below surface, WM13.6


text: University of Calgary

text: live

text: Generic

text: Tailing sample from WIP tailing pond, W09-07 (central site) 18.6m below surface, WM18.6

text: hydrocarbon metagenome

text: Prokaryotic diversity at WIP location W09-07 (central site) 18.6m below surface, WM18.6


text: University of Calgary

text: live

text: Generic

text: Tailing sample from WIP tailing pond, W09-07 (central site) 23.6m below surface, WM23.6

text: hydrocarbon metagenome

text: Prokaryotic diversity at WIP location W09-07 (central site) 23.6m below surface, WM23.6


text: University of Calgary

text: live

text: Generic

text: Tailing sample from WIP tailing pond, W09-07 (central site) 28.6m below surface, WM28.6

text: hydrocarbon metagenome

text: Prokaryotic diversity at WIP location W09-07 (central site) 28.6m below surface, WM28.6


text: University of Calgary

text: live

text: Generic

text: Tailing sample from WIP tailing pond, W09-07 (central site) 33.6m below surface, WM33.6

text: hydrocarbon metagenome

text: Prokaryotic diversity at WIP location W09-07 (central site) 33.6m below surface, WM33.6


text: University of Calgary

text: live

text: Generic

text: Tailing sample from WIP tailing pond, W09-07 (central site) 38.6m below surface, WM38.6

text: hydrocarbon metagenome

text: Prokaryotic diversity at WIP location W09-07 (central site) 38.6m below surface, WM38.6


text: University of Calgary

text: live

text: Generic

text: Tailing sample from WIP tailing pond, W09-04 (south site) 9.0m below surface, WS9

text: hydrocarbon metagenome

text: Prokaryotic diversity at WIP location W09-04 (south site) 9.0m below surface, WS9


text: University of Calgary

text: live

text: Generic

text: Tailing sample from WIP tailing pond, W09-04 (south site) 14.0m below surface, WS14

text: hydrocarbon metagenome

text: Prokaryotic diversity at WIP location W09-04 (south site) 14.0m below surface, WS14


text: University of Calgary

text: live

text: Generic

text: Tailing sample from WIP tailing pond, W09-04 (south site) 19.0m below surface, WS19

text: hydrocarbon metagenome

text: Prokaryotic diversity at WIP location W09-04 (south site) 19.0m below surface, WS19


text: University of Calgary

text: live

text: Generic

text: Tailing sample from WIP tailing pond, W09-04 (south site) 24.0m below surface, WS24

text: hydrocarbon metagenome

text: Prokaryotic diversity at WIP location W09-04 (south site) 24.0m below surface, WS24


text: University of Calgary

text: live

text: Generic

text: Tailing sample from WIP tailing pond, W09-04 (south site) 29.0m below surface, WS29

text: hydrocarbon metagenome

text: Prokaryotic diversity at WIP location W09-04 (south site) 29.0m below surface, WS29


text: University of Calgary

text: live

text: Generic

text: Tailing sample from WIP tailing pond, W09-04 (south site) 34.0m below surfac, WS34

text: hydrocarbon metagenome

text: Prokaryotic diversity at WIP location W09-04 (south site) 34.0m below surfac, WS34


text: University of Calgary

text: live

text: Generic

text: Tailing sample from MLSB tailing pond, M09-07 (north site) 1.5m below surface, MN1.5

text: hydrocarbon metagenome

text: Prokaryotic diversity at MLSB location M09-07 (north site) 1.5m below surface, MN1.5


text: University of Calgary

text: live

text: Generic

text: Tailing sample from MLSB tailing pond, M09-07 (north site) 6.5m below surface,MN6.5

text: hydrocarbon metagenome

text: Prokaryotic diversity at MLSB location M09-07 (north site) 6.5m below surface,MN6.5


text: University of Calgary

text: live

text: Generic

text: Tailing sample from MLSB tailing pond, M09-07 (north site) 11.5m below surface, MN11.5

text: hydrocarbon metagenome

text: Prokaryotic diversity at MLSB location M09-07 (north site) 11.5m below surface, MN11.5


text: University of Calgary

text: live

text: Generic

text: Tailing sample from MLSB tailing pond, M09-07 (north site) 16.5m below surface, MN16.5

text: hydrocarbon metagenome

text: Prokaryotic diversity at MLSB location M09-07 (north site) 16.5m below surface, MN16.5


text: University of Calgary

text: live

text: Generic

text: Tailing sample from MLSB tailing pond, M09-07 (north site) 21.5m below surface, MN21.5

text: hydrocarbon metagenome

text: Prokaryotic diversity at MLSB location M09-07 (north site) 21.5m below surface, MN21.5


text: University of Calgary

text: live

text: Generic

text: Tailing sample from MLSB tailing pond, M09-07 (north site) 26.5m below surface, MN26.5

text: hydrocarbon metagenome

text: Prokaryotic diversity at MLSB location M09-07 (north site) 26.5m below surface, MN26.5


text: University of Calgary

text: live

text: Generic

text: Tailing sample from MLSB tailing pond, M09-07 (north site) 31.5m below surface, MN31.5

text: hydrocarbon metagenome

text: Prokaryotic diversity at MLSB location M09-07 (north site) 31.5m below surface, MN31.5


text: University of Calgary

text: live

text: Generic

text: Tailing sample from MLSB tailing pond, M09-16 (central site) 3m below surface, MM3

text: hydrocarbon metagenome

text: Prokaryotic diversity at MLSB location M09-16 (central site) 3m below surface, MM3


text: University of Calgary

text: live

text: Generic

text: Tailing sample from MLSB tailing pond, M09-16 (central site) 8m below surface, MM8

text: hydrocarbon metagenome

text: Prokaryotic diversity at MLSB location M09-16 (central site) 8m below surface, MM8