name: Acidovorax defluvii BoFeN1 genome sequencing

text: Argonne National Laboratory

text: live

text: Generic

text: This organism is a anaerobic nitrate-dependent Fe(II)-oxidizing beta-preoteobacterium isolated from shallow sediment in freshwater Lake Constance.

text: Acidovorax defluvii


status: PUBLIC

characteristic: External Id

text: National Institute of Genetics

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Tanzanian coelacanth

characteristic: description

text: Latimeria chalumnae

characteristic: organism

text: Whole genome Fosmid library, CFIC

characteristic: title

tag: attribute

characteristic: vector


text: dbGaP

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: GRU

text: CEREBRUM

characteristic: histological type

text: No

characteristic: is tumor

text: Homo sapiens

text: Case-Control

characteristic: study design

text: Retrotransposition in Colorectal Cancer

characteristic: study name

text: No

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Non-tumor DNA sample from a human participant in the dbGaP study Retrotransposition in Colorectal Cancer


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

text: GRU

text: COLON

text: No

text: Homo sapiens

text: Case-Control

text: Retrotransposition in Colorectal Cancer

text: No


text: dbGaP

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

text: GRU

text: COLON

text: Yes

text: Homo sapiens

characteristic: organism

text: Case-Control

text: Colonic Neoplasms

characteristic: study disease

text: Retrotransposition in Colorectal Cancer

text: Yes

text: Colonic Neoplasms tumor DNA sample from a human participant in the dbGaP study Retrotransposition in Colorectal Cancer

characteristic: title


EMS/P2 set 1

text: Technion

text: live

text: Generic

text: C. elegans CEL-Seq data from two IVTs, each containing two matched pairs of EMS and P2 blastomeres (a total of eight blastomeres from four embryos).

characteristic: description

text: Caenorhabditis elegans

text: C. elegans EMS and P2 blastomeres, set 1


EMS/P2 set 3

text: Technion

text: live

text: Generic

text: Multiplexed C. elegans CEL-Seq data from one IVT, containing three matched pairs of EMS and P2 blastomeres (a total of six blastomeres from three embryos), as well as two matched pairs of C and P3 blastomeres (a total of four blastomeres from two organisms).

text: Caenorhabditis elegans

text: C. elegans EMS and P2 blastomeres, set 2; C and P3 blastomeres, set 1


C/P3 set 2

text: Technion

text: live

text: Generic

text: C. elegans CEL-Seq data from one IVTs, containing four matched pairs of C and P3 blastomeres (a total of eight blastomeres from four organisms).

text: Caenorhabditis elegans

text: C. elegans C and P3 blastomeres, set 2


text: Kunming Institute of Zoology Chinese Academy of Sciences

text: live

text: Generic

text: Stool of cirrhosis patient without minimal hepatic encephalopathy

text: human metagenome

text: Feces collected from subject C001


text: live

text: Generic

text: Stool sample from cirrhosis patient C002 was collected.

text: human metagenome

text: Feces collected from subject C002


text: live

text: Generic

text: Stool sample from cirrhosis patient C003 was collected.

text: human metagenome

text: Feces collected from subject C003


text: live

text: Generic

text: Stool sample from cirrhosis patient C004 was collected.

text: human metagenome

text: Feces collected from subject C004


mouse ES/MEF

text: Technion

text: live

text: Generic

text: Multiplexed CEL-Seq data from one IVT of 7 mouse embryonic fibroblast (MEF) and 9 mouse embryonic stem (ES) cells. 20 pg of carrier RNA were added to each cell. The carrier RNA was obtained by extracting RNA from mixed stage C. elegans embryos, and all cells received RNA from the same batch.

text: Mus musculus

text: Mouse embryonic stem (ES) cells and embryonic fibroblasts (MEF)


text: live

text: Generic

text: Stool sample from cirrhosis patient C005 was collected.

text: human metagenome

text: Feces collected from subject C005


text: live

text: Generic

text: Stool sample from cirrhosis patient C007 was collected.

text: human metagenome

text: Feces collected from subject C007


text: live

text: Generic

text: Stool sample from cirrhosis patient C008 was collected.

text: human metagenome

text: Feces collected from subject C008


text: live

text: Generic

text: Stool sample from cirrhosis patient C009 was collected.

text: human metagenome

text: Feces collected from subject C009


text: live

text: Generic

text: Stool sample from cirrhosis patient C010 was collected.

text: human metagenome

text: Feces collected from subject C010


text: live

text: Generic

text: Stool sample from cirrhosis patient C011 was collected.

text: human metagenome

text: Feces collected from subject C011


text: live

text: Generic

text: Stool sample from cirrhosis patient C012 was collected.

text: human metagenome

text: Feces collected from subject C012


text: live

text: Generic

text: Stool sample from cirrhosis patient C013 was collected.

text: human metagenome

text: Feces collected from subject C013


text: live

text: Generic

text: Stool sample from cirrhosis patient C016 was collected.

text: human metagenome

text: Feces collected from subject C016


text: live

text: Generic

text: Stool sample from cirrhosis patient C017 was collected.

text: human metagenome

text: Feces collected from subject C017


text: Kunming Institute of Zoology Chinese Academy of Sciences

text: live

text: Generic

text: Stool sample from cirrhosis patient C018 was collected.

text: human metagenome

text: Feces collected from subject C018


text: live

text: Generic

text: Stool sample from cirrhosis patient C019 was collected.

text: human metagenome

text: Feces collected from subject C019


text: live

text: Generic

text: Stool sample from cirrhosis patient C020 was collected.

text: human metagenome

text: Feces collected from subject C020


text: live

text: Generic

text: Stool sample from cirrhosis patient C021 was collected.

text: human metagenome

text: Feces collected from subject C021


text: live

text: Generic

text: Stool sample from cirrhosis patient C023 was collected.

text: human metagenome

text: Feces collected from subject C023


text: live

text: Generic

text: Stool sample from cirrhosis patient C024 was collected.

text: human metagenome

text: Feces collected from subject C024


text: live

text: Generic

text: Stool sample from cirrhosis patient C025 was collected.

text: human metagenome

text: Feces collected from subject C025


text: live

text: Generic

text: Stool sample from cirrhosis patient C026 was collected.

text: human metagenome

text: Feces collected from subject C026


text: live

text: Generic

text: Stool sample from cirrhosis patient C027 was collected.

text: human metagenome

text: Feces collected from subject C027


text: live

text: Generic

text: Stool sample from cirrhosis patient C028 was collected.

text: human metagenome

text: Feces collected from subject C028


text: live

text: Generic

text: Stool sample from cirrhosis patient C029 was collected.

text: human metagenome

text: Feces collected from subject C029


text: live

text: Generic

text: Stool sample from MHE’s healthy relative H001 was collected.

text: human metagenome

text: Feces collected from subject H001


text: live

text: Generic

text: Stool sample from MHE’s healthy relative H002 was collected.

text: human metagenome

text: Feces collected from subject H002


text: live

text: Generic

text: Stool sample from MHE’s healthy relative H003 was collected.

text: human metagenome

text: Feces collected from subject H003


text: live

text: Generic

text: Stool sample from MHE’s healthy relative H004 was collected.

text: human metagenome

text: Feces collected from subject H004


text: live

text: Generic

text: Stool sample from MHE’s healthy relative H005 was collected.

text: human metagenome

text: Feces collected from subject H005


text: Kunming Institute of Zoology Chinese Academy of Sciences

text: live

text: Generic

text: Stool sample from MHE’s healthy relative H006 was collected.

text: human metagenome

text: Feces collected from subject H006


text: live

text: Generic

text: Stool sample from MHE’s healthy relative H007 was collected.

text: human metagenome

text: Feces collected from subject H007


text: live

text: Generic

text: Stool sample from MHE’s healthy relative H008 was collected.

text: human metagenome

text: Feces collected from subject H008


text: live

text: Generic

text: Stool sample from MHE’s healthy relative H009 was collected.

text: human metagenome

text: Feces collected from subject H009


text: live

text: Generic

text: Stool sample from MHE’s healthy relative H010 was collected.

text: human metagenome

text: Feces collected from subject H010


text: live

text: Generic

text: Stool sample from MHE’s healthy relative H011 was collected.

text: human metagenome

text: Feces collected from subject H011


text: live

text: Generic

text: Stool sample from MHE’s healthy relative H012 was collected.

text: human metagenome

text: Feces collected from subject H012


text: live

text: Generic

text: Stool sample from MHE’s healthy relative H013 was collected.

text: human metagenome

text: Feces collected from subject H013


text: live

text: Generic

text: Stool sample from MHE’s healthy relative H014 was collected.

text: human metagenome

text: Feces collected from subject H014


text: live

text: Generic

text: Stool sample from MHE’s healthy relative H016 was collected.

text: human metagenome

text: Feces collected from subject H016


text: live

text: Generic

text: Stool sample from MHE’s healthy relative H017 was collected.

text: human metagenome

text: Feces collected from subject H017


text: live

text: Generic

text: Stool sample from MHE’s healthy relative H018 was collected.

text: human metagenome

text: Feces collected from subject H018


text: live

text: Generic

text: Stool sample from MHE’s healthy relative H019 was collected.

text: human metagenome

text: Feces collected from subject H019


text: live

text: Generic

text: Stool sample from MHE’s healthy relative H020 was collected.

text: human metagenome

text: Feces collected from subject H020


text: live

text: Generic

text: Stool sample from MHE’s healthy relative H021 was collected.

text: human metagenome

text: Feces collected from subject H021


text: live

text: Generic

text: Stool sample from MHE’s healthy relative H022 was collected.

text: human metagenome

text: Feces collected from subject H022


text: Kunming Institute of Zoology Chinese Academy of Sciences

text: live

text: Generic

text: Stool sample from MHE’s healthy relative H023 was collected.

text: human metagenome

text: Feces collected from subject H023


text: live

text: Generic

text: Stool sample from MHE’s healthy relative H024 was collected.

text: human metagenome

text: Feces collected from subject H024


text: live

text: Generic

text: Stool sample from MHE’s healthy relative H025 was collected.

text: human metagenome

text: Feces collected from subject H025


text: live

text: Generic

text: Stool sample from MHE’s healthy relative H027 was collected.

text: human metagenome

text: Feces collected from subject H027


text: live

text: Generic

text: Stool sample from MHE’s healthy relative H029 was collected.

text: human metagenome

text: Feces collected from subject H029


text: live

text: Generic

text: Stool sample from MHE patient M001 was collected.

text: human metagenome

text: Feces collected from subject M001


text: live

text: Generic

text: Stool sample from MHE patient M002 was collected.

text: human metagenome

text: Feces collected from subject M002


text: live

text: Generic

text: Stool sample from MHE patient M003 was collected.

text: human metagenome

text: Feces collected from subject M003


text: Monash University

text: live

text: Generic

text: Neisseria gonorrhoeae FA 1090

text: FA 1090

characteristic: strain


3.5.11_FA1090_PilE AV

text: Monash University

text: live

text: Generic

text: Neisseria gonorrhoeae FA 1090

text: FA 1090

text: 3.5.11_FA1090_PilE AV


Sample_FA1090_pilE_V2 AV

text: Monash University

text: live

text: Generic

text: Neisseria gonorrhoeae FA 1090

text: FA 1090

text: Sample_FA1090_pilE_V2 AV


PilE RecA

text: Monash University

text: live

text: Generic

text: Neisseria gonorrhoeae MS11

text: PilE RecA


PilE-RecA

text: Monash University

text: live

text: Generic

text: Neisseria gonorrhoeae MS11

text: PilE-RecA


text: Monash University

text: live

text: Generic

text: Neisseria gonorrhoeae MS11


Ng_MS11.pilE recA.v2

text: Monash University

text: live

text: Generic

text: Neisseria gonorrhoeae MS11

text: Ng_MS11.pilE recA.v2


Nm_FAM18.pilE recA.v2

text: Monash University

text: live

text: Generic

text: Neisseria meningitidis FAM18

text: Nm_FAM18.pilE recA.v2


text: Monash University

text: live

text: Generic

text: Neisseria meningitidis FAM18


text: Monash University

text: live

text: Generic

text: Neisseria meningitidis NMB

text: NMB


text: Monash University

text: live

text: Generic

text: N. meningitidis CKNM397, gene pilE, experiment 1

text: Neisseria meningitidis


text: Monash University

text: live

text: Generic

text: N. meningitidis CKNM397, gene pilE, experiment 2

text: Neisseria meningitidis


text: live

text: Generic

text: Stool sample from MHE patient M004 was collected.

text: human metagenome

text: Feces collected from subject M004


Ng_FA1090_OpaK IPTG_k50

text: Monash University

text: live

text: Generic

text: Neisseria gonorrhoeae FA 1090

text: FA 1090

text: Ng_FA1090_OpaK IPTG_k50


Sample_FA1090_opaK_V2 AV

text: Monash University

text: live

text: Generic

text: Neisseria gonorrhoeae FA 1090

text: FA 1090

text: Sample_FA1090_opaK_V2 AV


text: live

text: Generic

text: Stool sample from MHE patient M005 was collected.

text: human metagenome

text: Feces collected from subject M005


text: live

text: Generic

text: Stool sample from MHE patient M006 was collected.

text: human metagenome

text: Feces collected from subject M006


text: live

text: Generic

text: Stool sample from MHE patient M007 was collected.

text: human metagenome

text: Feces collected from subject M007


text: live

text: Generic

text: Stool sample from MHE patient M008 was collected.

text: human metagenome

text: Feces collected from subject M008


text: live

text: Generic

text: Stool sample from MHE patient M009 was collected.

text: human metagenome

text: Feces collected from subject M009


gfl shrimp

text: National Fisheries Research and Development Institute

text: live

text: Generic

text: Penaeus monodon

text: Resistant Shrimp


text: Kunming Institute of Zoology Chinese Academy of Sciences

text: live

text: Generic

text: Stool sample from MHE patient M010 was collected.

text: human metagenome

text: Feces collected from subject M010


text: live

text: Generic

text: Stool sample from MHE patient M011 was collected.

text: human metagenome

text: Feces collected from subject M011


text: live

text: Generic

text: Stool sample from MHE patient M012 was collected.

text: human metagenome

text: Feces collected from subject M012


text: live

text: Generic

text: Stool sample from MHE patient M013 was collected.

text: human metagenome

text: Feces collected from subject M013


text: live

text: Generic

text: Stool sample from MHE patient M014 was collected.

text: human metagenome

text: Feces collected from subject M014


text: live

text: Generic

text: Stool sample from MHE patient M016 was collected.

text: human metagenome

text: Feces collected from subject M016


text: live

text: Generic

text: Stool sample from MHE patient M017 was collected.

text: human metagenome

text: Feces collected from subject M017


text: live

text: Generic

text: Stool sample from MHE patient M018 was collected.

text: human metagenome

text: Feces collected from subject M018


text: live

text: Generic

text: Stool sample from MHE patient M019 was collected.

text: human metagenome

text: Feces collected from subject M019


text: live

text: Generic

text: Stool sample from MHE patient M020 was collected.

text: human metagenome

text: Feces collected from subject M020


text: live

text: Generic

text: Stool sample from MHE patient M021 was collected.

text: human metagenome

text: Feces collected from subject M021


text: live

text: Generic

text: Stool sample from MHE patient M022 was collected.

text: human metagenome

text: Feces collected from subject M022


text: live

text: Generic

text: Stool sample from MHE patient M023 was collected.

text: human metagenome

text: Feces collected from subject M023


text: live

text: Generic

text: Stool sample from MHE patient M024 was collected.

text: human metagenome

text: Feces collected from subject M024


text: live

text: Generic

text: Stool sample from MHE patient M025 was collected.

text: human metagenome

text: Feces collected from subject M025


text: live

text: Generic

text: Stool sample from MHE patient M027 was collected.

text: human metagenome

text: Feces collected from subject M027


text: Kunming Institute of Zoology Chinese Academy of Sciences

text: live

text: Generic

text: Stool sample from MHE patient M029 was collected.

text: human metagenome

text: Feces collected from subject M029


Smar R-Norm

text: University of Rennes 1

text: live

text: Generic

text: Sporobolus maritimus

text: Spartina maritima roots normalized cDNA library


Smar R-unnorm

text: University of Rennes 1

text: live

text: Generic

text: Sporobolus maritimus

text: Spartina maritima roots non-normalized cDNA library


Smar L-norm

text: University of Rennes 1

text: live

text: Generic

text: Sporobolus maritimus

text: Spartina maritima leaves normalized cDNA library


Smar L-unnorm

text: University of Rennes 1

text: live

text: Generic

text: Sporobolus maritimus

text: Spartina maritima leaves non-normalized library


Salt R-unnorm

text: University of Rennes 1

text: live

text: Generic

text: Sporobolus alterniflorus

text: Spartina alterniflora roots non-normalized cDNA library


Salt L-unnorm

text: University of Rennes 1

text: live

text: Generic

text: Sporobolus alterniflorus

text: Spartina alterniflora leaves non-normalized cDNA library


text: Life Sciences, The Chinese University of Hong Kong

text: live

text: Generic

text: Vegetative mycelium

characteristic: developmental stage

text: Coprinopsis cinerea

text: Vegetative mycelium


characteristic: External Id

text: live

text: Generic

text: Stage 1 primordium

text: Coprinopsis cinerea

text: Stage 1 primordium


text: Berman Lab in USC Epigenome Center, Genetics, Molecular and Cellular Biology program, University of Southern California

characteristic: INSDC center name

text: live

text: Generic

characteristic: cell line

text: lung fiboblast cells

characteristic: cell type

text: Homo sapiens

text: lung fibroblast

text: NOMe-seq IMR90


characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: Primary culture

text: glioblastoma

text: Homo sapiens

text: glioblastoma cells

text: NOMe-seq GBM157


characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Primary culture

text: glioblastoma

text: Homo sapiens

text: glioblastoma cells

text: NOMe-seq GBM248


text: Genome Research Foundation

text: live

text: Generic

characteristic: SRA accession

text: Homo sapiens


VC1 (CA)

text: Imperial College London

text: live

text: Generic

characteristic: collection date

text: Canada: Vancouver Island

characteristic: geo loc name

text: L. catesbeianus

characteristic: isolation-source

text: Batrachochytrium dendrobatidis

characteristic: organism

text: Generic sample from B. dendrobatis


SFBC014 (GB)

text: Imperial College London

text: live

text: Generic

text: United Kingdom: Cumbria

text: E. calamita

text: Batrachochytrium dendrobatidis

text: Generic sample from B. dendrobatis

characteristic: title


ETH2 (ET)

text: Imperial College London

text: live

text: Generic

text: Ethiopia: Hotcho

text: A. enseticola

text: Batrachochytrium dendrobatidis

text: Generic sample from B. dendrobatis


ETH4 (ET)

text: Imperial College London

text: live

text: Generic

text: Ethiopia: Telilia Stream near Rira

text: Leptopelis sp.

text: Batrachochytrium dendrobatidis

text: Generic sample from B. dendrobatis


AUL (FR)

text: Imperial College London

text: live

text: Generic

text: France: Lac d'Aule

text: A. obstetricans

text: Batrachochytrium dendrobatidis

text: Generic sample from B. dendrobatis


RC5.1 (FR)

text: Imperial College London

text: live

text: Generic

text: France: loire et Cher

text: L. catesbeianus

text: Batrachochytrium dendrobatidis

text: Generic sample from B. dendrobatis


MAD (FR)

text: Imperial College London

text: live

text: Generic

text: France: Madamette

text: A. obstetricans

text: Batrachochytrium dendrobatidis

text: Generic sample from B. dendrobatis


TF5a1 (ES)

text: Imperial College London

text: live

text: Generic

text: Spain: Mallorca, Torrent des Ferrerets

text: A. muletensis

text: Batrachochytrium dendrobatidis

text: Generic sample from B. dendrobatis


JEL423 (PA)

text: Imperial College London

text: live

text: Generic

text: Panama: Guabal

text: P. lemur

text: Batrachochytrium dendrobatidis

text: Generic sample from B. dendrobatis


AP15 (IT)

text: Imperial College London

text: live

text: Generic

text: Italy: Sardinia, Affluente Pisharoni

text: D. sardus

text: Batrachochytrium dendrobatidis

text: Generic sample from B. dendrobatis


MODS27 (IT)

text: Imperial College London

text: live

text: Generic

text: Italy: Sardinia, Monte Olia

text: D. sardus

text: Batrachochytrium dendrobatidis

text: Generic sample from B. dendrobatis


MODS28 (IT)

text: Imperial College London

text: live

text: Generic

text: Italy: Sardinia, Monte Olia

text: D. sardus

text: Batrachochytrium dendrobatidis

text: Generic sample from B. dendrobatis


SP10 (IT)

text: Imperial College London

text: live

text: Generic

text: Italy: Sardinia, Scuponi

text: D. sardus

text: Batrachochytrium dendrobatidis

text: Generic sample from B. dendrobatis


MG1 (ZA)

text: Imperial College London

text: live

text: Generic

text: South Africa: Mount, KZN

text: A. vertebralis

text: Batrachochytrium dendrobatidis

text: Generic sample from B. dendrobatis


SA1d (ZA)

text: Imperial College London

text: live

text: Generic

text: South Africa: Pinetown Kwazulu

text: A. angolensis

text: Batrachochytrium dendrobatidis

text: Generic sample from B. dendrobatis


SA4c (ZA)

text: Imperial College London

text: live

text: Generic

text: South Africa: Pinetown Kwazulu

text: A. angolensis

text: Batrachochytrium dendrobatidis

text: Generic sample from B. dendrobatis


MG4 (ZA)

text: Imperial College London

text: live

text: Generic

text: South Africa: SilverMine, KZN

text: A. fuscigula

text: Batrachochytrium dendrobatidis

text: Generic sample from B. dendrobatis


ACON (CH)

text: Imperial College London

text: live

text: Generic

text: Switzerland: Gamlikon

text: A. obstetricans

text: Batrachochytrium dendrobatidis

text: Generic sample from B. dendrobatis


APEP (CH)

text: Imperial College London

text: live

text: Generic

text: Switzerland: Gamlikon

text: A. obstetricans

text: Batrachochytrium dendrobatidis

text: Generic sample from B. dendrobatis


CON2A (CH)

text: Imperial College London

text: live

text: Generic

text: Switzerland: Gamlikon

text: A. obstetricans

text: Batrachochytrium dendrobatidis

text: Generic sample from B. dendrobatis


BLI1 (CH)

text: Imperial College London

text: live

text: Generic

text: Switzerland: Itingen

text: A. obstetricans

text: Batrachochytrium dendrobatidis

text: Generic sample from B. dendrobatis


BEW2 (CH)

text: Imperial College London

text: live

text: Generic

text: Switzerland: Waltisberg

text: A. obstetricans

text: Batrachochytrium dendrobatidis

text: Generic sample from B. dendrobatis


MAL05 (GB)

text: Imperial College London

text: live

text: Generic

text: United Kingdom: England, Kent

text: M. alpestris

text: Batrachochytrium dendrobatidis

text: Generic sample from B. dendrobatis


LHURS8 (CH)

text: Imperial College London

text: live

text: Generic

text: France: Pyrenees

text: A. obstetricans

text: Batrachochytrium dendrobatidis

text: Generic sample from B. dendrobatis


TORO1 (ES)

text: Imperial College London

text: live

text: Generic

text: Spain: Mainland

text: A. obstetricans

text: Batrachochytrium dendrobatidis

text: Generic sample from B. dendrobatis


BR1 (CH)

text: Imperial College London

text: live

text: Generic

text: Switzerland: Brandsitengraben

text: A. obstetricans

text: Batrachochytrium dendrobatidis

text: Generic sample from B. dendrobatis


CHAL3 (CH)

text: Imperial College London

text: live

text: Generic

text: Switzerland: Chalchofen

text: A. obstetricans

text: Batrachochytrium dendrobatidis

text: Generic sample from B. dendrobatis


CH4 (CH)

text: Imperial College London

text: live

text: Generic

text: Switzerland: Chnubel

text: A. obstetricans

text: Batrachochytrium dendrobatidis

text: Generic sample from B. dendrobatis


HER3 (CH)

text: Imperial College London

text: live

text: Generic

text: Switzerland: Hergiswald

text: A. obstetricans

text: Batrachochytrium dendrobatidis

text: Generic sample from B. dendrobatis


RAS3 (CH)

text: Imperial College London

text: live

text: Generic

text: Switzerland: Raschenhaus

text: A. obstetricans

text: Batrachochytrium dendrobatidis

text: Generic sample from B. dendrobatis


SCH (CH)

text: Imperial College London

text: live

text: Generic

text: Switzerland: Schauensee

text: A. obstetricans

text: Batrachochytrium dendrobatidis

text: Generic sample from B. dendrobatis


STR3 (CH)

text: Imperial College London

text: live

text: Generic

text: Switzerland: Strickrain

text: A. obstetricans

text: Batrachochytrium dendrobatidis

text: Generic sample from B. dendrobatis


VOR3 (CH)

text: Imperial College London

text: live

text: Generic

text: Switzerland: Vorder Birnbaum

text: A. obstetricans

text: Batrachochytrium dendrobatidis

text: Generic sample from B. dendrobatis


text: ENCODE DCC

text: live

text: Generic

characteristic: age

text: Adult 8 weeks

characteristic: age description

text: CSHL lab

characteristic: biomaterial provider

characteristic: biorep

text: FrontalLobe

characteristic: cell

text: Frontal Lobe

characteristic: cell description

text: mouse

characteristic: cell organism

text: U

characteristic: cell sex

text: RnaSeq

characteristic: datatype

text: Sequencing analysis of RNA expression

characteristic: datatype description

text: CSHL-m

characteristic: lab

text: Gingeras - Cold Spring Harbor Laboratory

characteristic: lab description

characteristic: labexpid

text: Mus musculus

characteristic: readtype

text: Paired 101 nt directed reads

characteristic: readtype description

text: FrontalLobe

characteristic: spikeinpool

characteristic: strain

text: A substrain of C57BL/6

characteristic: strain description

text: CSHL_RnaSeq_FrontalLobe_adult-8wks (superseded by GSE90206)


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

text: Adult 8 weeks

characteristic: age description

text: 1)LICR lab; 2)CSHL lab

text: Cortex

text: Cortex

text: mouse

text: U

text: RnaSeq

text: Sequencing analysis of RNA expression

text: CSHL-m

text: Mus musculus

characteristic: organism

text: Paired 101 nt directed reads

text: Cortex

text: A substrain of C57BL/6

text: CSHL_RnaSeq_Cortex_adult-8wks (superseded by GSE90205)

characteristic: title


text: ENCODE DCC

text: live

text: Generic

text: Adult 8 weeks

text: CSHL lab

characteristic: biomaterial provider

characteristic: biorep

text: Bladder

characteristic: cell

text: Urinary Bladder

characteristic: cell description

text: mouse

characteristic: cell organism

text: U

characteristic: cell sex

text: RnaSeq

characteristic: datatype

text: Sequencing analysis of RNA expression

characteristic: datatype description

text: CSHL-m

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Mus musculus

characteristic: readtype

text: Paired 101 nt directed reads

characteristic: readtype description

text: Bladder

text: A substrain of C57BL/6

text: CSHL_RnaSeq_Bladder_adult-8wks (superseded by GSE90204)


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

text: Adult 8 weeks

text: LICR lab

text: Placenta

text: Placenta

text: mouse

text: U

text: RnaSeq

text: Sequencing analysis of RNA expression

text: CSHL-m

text: Mus musculus

text: Paired 101 nt directed reads

text: Placenta

characteristic: spikeinpool

characteristic: strain

text: A substrain of C57BL/6

characteristic: strain description

text: CSHL_RnaSeq_Placenta_adult-8wks (superseded by GSE90203)


text: ENCODE DCC

text: live

text: Generic

text: Embryonic day 18

characteristic: age description

text: 1)Stam lab; 2)CSHL lab

characteristic: biomaterial provider

characteristic: biorep

text: Liver

characteristic: cell

text: Liver

characteristic: cell description

text: mouse

characteristic: cell organism

text: U

characteristic: cell sex

text: RnaSeq

characteristic: datatype

text: Sequencing analysis of RNA expression

characteristic: datatype description

text: CSHL-m

characteristic: lab

characteristic: lab description

text: Mus musculus

characteristic: organism

text: Paired 101 nt directed reads

text: Liver

text: A substrain of C57BL/6

text: CSHL_RnaSeq_Liver_E18 (superseded by GSE90202)

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

text: Adult 8 weeks

text: 1)LICR lab; 2)CSHL lab

text: Cerebellum

text: Cerebellum

text: mouse

text: U

text: RnaSeq

text: Sequencing analysis of RNA expression

text: CSHL-m

characteristic: labexpid

text: Mus musculus

characteristic: readtype

text: Paired 101 nt directed reads

characteristic: readtype description

text: Cerebellum

text: A substrain of C57BL/6

text: CSHL_RnaSeq_Cerebellum_adult-8wks (superseded by GSE90200)


text: ENCODE DCC

text: live

text: Generic

text: Embryonic day 14.5

characteristic: age description

text: 1)LICR lab; 2)CSHL lab

characteristic: biomaterial provider

characteristic: biorep

text: Limb

characteristic: cell

text: Limb

characteristic: cell description

text: mouse

characteristic: cell organism

text: U

characteristic: cell sex

text: RnaSeq

characteristic: datatype

text: Sequencing analysis of RNA expression

characteristic: datatype description

text: CSHL-m

characteristic: lab

text: Mus musculus

text: Paired 101 nt directed reads

text: Limb

characteristic: spikeinpool

characteristic: strain

text: A substrain of C57BL/6

characteristic: strain description

text: CSHL_RnaSeq_Limb_E14.5 (superseded by GSE90201)


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

text: Embryonic day 14

text: CSHL lab

text: CNS

text: Central Nervous System

text: mouse

text: U

text: RnaSeq

text: Sequencing analysis of RNA expression

text: CSHL-m

characteristic: lab description

text: Mus musculus

characteristic: organism

text: Paired 101 nt directed reads

text: CNS

text: A substrain of C57BL/6

text: CSHL_RnaSeq_CNS_E14 (superseded by GSE90198)

characteristic: title


text: ENCODE DCC

text: live

text: Generic

text: Embryonic day 18

characteristic: age description

text: CSHL lab

characteristic: biomaterial provider

characteristic: biorep

text: CNS

characteristic: cell

text: Central Nervous System

characteristic: cell description

text: mouse

characteristic: cell organism

text: U

characteristic: cell sex

text: RnaSeq

characteristic: datatype

text: Sequencing analysis of RNA expression

characteristic: datatype description

text: CSHL-m

characteristic: lab

characteristic: labexpid

text: Mus musculus

characteristic: readtype

text: Paired 101 nt directed reads

characteristic: readtype description

text: CNS

text: A substrain of C57BL/6

text: CSHL_RnaSeq_CNS_E18 (superseded by GSE90199)


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

text: Embryonic day 14.5

text: 1)Stam lab; 2)CSHL lab

text: Liver

text: Liver

text: mouse

text: U

text: RnaSeq

text: Sequencing analysis of RNA expression

text: CSHL-m

text: Mus musculus

text: Paired 101 nt directed reads

text: Liver

characteristic: spikeinpool

characteristic: strain

text: A substrain of C57BL/6

characteristic: strain description

text: CSHL_RnaSeq_Liver_E14.5 (superseded by GSE90196)


text: ENCODE DCC

text: live

text: Generic

text: Embryonic day 14.5

characteristic: age description

text: 1)Stam lab; 2)CSHL lab

characteristic: biomaterial provider

characteristic: biorep

text: WholeBrain

characteristic: cell

text: Whole Brain

characteristic: cell description

text: mouse

characteristic: cell organism

text: U

characteristic: cell sex

text: RnaSeq

characteristic: datatype

text: Sequencing analysis of RNA expression

characteristic: datatype description

text: CSHL-m

characteristic: lab

characteristic: lab description

text: Mus musculus

characteristic: organism

text: Paired 101 nt directed reads

text: WholeBrain

text: A substrain of C57BL/6

text: CSHL_RnaSeq_WholeBrain_E14.5 (superseded by GSE90197)

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

text: Embryonic day 11.5

text: CSHL lab

text: CNS

text: Central Nervous System

text: mouse

text: U

text: RnaSeq

text: Sequencing analysis of RNA expression

text: CSHL-m

characteristic: labexpid

text: Mus musculus

characteristic: readtype

text: Paired 101 nt directed reads

characteristic: readtype description

text: CNS

text: A substrain of C57BL/6

text: CSHL_RnaSeq_CNS_E11.5 (superseded by GSE90194)


text: ENCODE DCC

text: live

text: Generic

text: Embryonic day 14

characteristic: age description

text: 1)Stam lab; 2)CSHL lab

characteristic: biomaterial provider

characteristic: biorep

text: Liver

characteristic: cell

text: Liver

characteristic: cell description

text: mouse

characteristic: cell organism

text: U

characteristic: cell sex

text: RnaSeq

characteristic: datatype

text: Sequencing analysis of RNA expression

characteristic: datatype description

text: CSHL-m

characteristic: lab

text: Mus musculus

text: Paired 101 nt directed reads

text: Liver

characteristic: spikeinpool

characteristic: strain

text: A substrain of C57BL/6

characteristic: strain description

text: CSHL_RnaSeq_Liver_E14 (superseded by GSE90195)


Sheep Genome Sequence

characteristic: External Id

text: Texas A&M University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Ovis aries

characteristic: organism

text: Sheep Genome Sequence

characteristic: title


text: TIB CAS

text: live

text: Generic

text: 2 days

characteristic: culture time

text: Beauveria bassiana

text: BbWT

text: mycelia

characteristic: tissue

text: 2 mM menadione for 3-h

characteristic: treatment


text: TIB CAS

text: live

text: Generic

text: 2 days

text: Beauveria bassiana

text: mycelia

text: 2 mM menadione for 3-h


text: TIB CAS

text: live

text: Generic

text: 2 days

text: Beauveria bassiana

text: BbWT

text: mycelia

text: 40 °C for 3-h


text: TIB CAS

text: live

text: Generic

text: 2 days

text: Beauveria bassiana

text: mycelia

text: 40 °C for 3-h


text: TIB CAS

text: live

text: Generic

text: 2 days

text: Metarhizium robertsii

text: MrWT

text: mycelia

text: 2 mM menadione for 3-h


text: TIB CAS

text: live

text: Generic

text: 2 days

text: Metarhizium robertsii

text: mycelia

text: 2 mM menadione for 3-h


text: TIB CAS

text: live

text: Generic

text: 2 days

text: Metarhizium robertsii

text: MrWT

text: mycelia

text: 40 °C for 3-h


text: TIB CAS

text: live

text: Generic

text: 2 days

text: Metarhizium robertsii

text: mycelia

text: 40 °C for 3-h


GBM #1

text: Tampere University of Technology

text: live

text: Generic

text: Pooled small RNA from commercial normal fetal brain tissue.

characteristic: description

text: Homo sapiens


text: CMB-6, Genome Institute of Singapore

text: live

text: Generic

text: none, input-DNA

characteristic: chip

text: Mus musculus

text: Embryonic stem cell

characteristic: strain

text: Embryonic stem cell


characteristic: External Id

text: CMB-6, Genome Institute of Singapore

text: live

text: Generic

text: H3K4me3 (04-745, Millipore)

text: Mus musculus

text: Embryonic stem cell

text: Embryonic stem cell


text: CMB-6, Genome Institute of Singapore

characteristic: INSDC center name

text: live

text: Generic

text: none, input-DNA

text: 1k Cells

characteristic: number of cells

text: Mus musculus

text: Embryonic stem cell

text: Embryonic stem cell


text: CMB-6, Genome Institute of Singapore

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: H3K27me3 (07-449, Millipore)

text: 1k Cells

text: Mus musculus

text: Embryonic stem cell

text: Embryonic stem cell


text: CMB-6, Genome Institute of Singapore

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: none, input-DNA

text: 10k Cells

text: Mus musculus

text: Embryonic stem cell

text: Embryonic stem cell


text: CMB-6, Genome Institute of Singapore

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: H3K27me3 (07-449, Millipore)

text: 10k Cells

text: Mus musculus

text: Embryonic stem cell

text: Embryonic stem cell


text: CMB-6, Genome Institute of Singapore

text: live

text: Generic

characteristic: SRA accession

text: none, input-DNA

text: 100k Cells

text: Mus musculus

characteristic: organism

text: Embryonic stem cell

text: Embryonic stem cell


text: CMB-6, Genome Institute of Singapore

text: live

text: Generic

text: H3K27me3 (07-449, Millipore)

text: 100k Cells

text: Mus musculus

text: Embryonic stem cell

text: Embryonic stem cell

characteristic: title


text: CMB-6, Genome Institute of Singapore

text: live

text: Generic

text: none, input-DNA

text: Mus musculus

text: Embryonic stem cell

text: Embryonic stem cell

characteristic: tissue

text: Non-WGA-ES-input


text: CMB-6, Genome Institute of Singapore

text: live

text: Generic

text: H3K27me3 (07-449, Millipore)

text: Mus musculus

text: Embryonic stem cell

text: Embryonic stem cell


Drosophila mauritiana Pool-Seq

text: University of Veterinary Medicine Vienna

text: live

text: Generic

text: Drosophila mauritiana

text: Paired-End Illumina sequencing of 107 pooled Drosophila mauritiana females


text: Le Hir lab, Functional Genomics, IBENS

text: live

text: Generic

text: HeLa

characteristic: cell line

text: Homo sapiens

text: HeLa eIF4AIII CLIP-seq

text: HeLa eIF4AIII CLIP-seq 1


text: Le Hir lab, Functional Genomics, IBENS

text: live

text: Generic

text: HeLa

text: Homo sapiens

text: HeLa eIF4AIII CLIP-seq

text: HeLa eIF4AIII CLIP-seq 2


text: Le Hir lab, Functional Genomics, IBENS

text: live

text: Generic

text: HeLa

text: Homo sapiens

text: HeLa mRNA-seq

text: HeLa mRNA-seq


text: Tampere University of Technology

text: live

text: Generic

text: Pooled small RNA from five glioblastoma patients. This sample represents pool #1.

characteristic: description

text: Homo sapiens

text: Pooled small RNA from five glioblastoma patients (pool #1)


Pusillimonas noertemannii BS8

text: LSHTM

text: live

text: Generic

text: Pusillimonas noertemannii

text: Pusillimonas noertemannii BS8 draft genome


text: Tampere University of Technology

text: live

text: Generic

text: Pooled small RNA from five glioblastoma patients. This sample represents pool #2.

text: Homo sapiens


text: Tampere University of Technology

text: live

text: Generic

text: Pooled small RNA from five glioblastoma patients. This sample represents pool #3.

text: Homo sapiens


text: Young Lab, Whitehead Institute for Biomedical Research

text: live

text: Generic

text: B-cell lymphoma

characteristic: cell type

text: Homo sapiens

text: P493-6 cells with low c-Myc expression

text: low c-Myc. P493-6 T=0HR - RNA-Seq


text: live

text: Generic

text: B-cell lymphoma

text: Homo sapiens

text: P493-6 cells with high c-Myc expression

text: high c-Myc. P493-6 T=24HR - RNA-Seq


Botryococcus braunii

text: CICITEM-Univ. de Antofagasta

text: live

text: Generic

text: Botryococcus braunii race A, cultivated in massive system in northern of Chile, in UMA2 media. Photobiorreactors like flat-panel.

text: Botryococcus braunii

text: Botryococcus braunii UMA2 transcriptome project


text: INRA

text: live

text: Generic

text: - total RNA extraction from fresh plant material: CTAB protocol - mRNA to double stranded cDNA conversion : Mint cDNA synthesis kit (Evrogen) - cDNA libraries sequencing : standard Roche-454 protocol.

text: Eperua falcata

text: cDNA Eperua falcata 454-pyrosequencing


text: Tampere University of Technology

text: live

text: Generic

text: Pooled small RNA from five glioblastoma patients. This sample represents pool #4.

text: Homo sapiens

text: Pooled small RNA from five glioblastoma patients (pool #4)


text: Tampere University of Technology

text: live

text: Generic

text: Pooled small RNA from five anaplastic astrocytoma patients.

text: Homo sapiens


text: Tampere University of Technology

text: live

text: Generic

text: Pooled small RNA from five oligodendroglioma patients. This sample represents pool #1.

text: Homo sapiens

text: Pooled small RNA from five oligodendroglioma patients (pool #1)


text: Tampere University of Technology

text: live

text: Generic

text: Pooled small RNA from four oligodendroglioma patients. This sample represents pool #2.

text: Homo sapiens

text: Pooled small RNA from four oligodendroglioma patients (pool #2)


text: Tampere University of Technology

text: live

text: Generic

text: Pooled small RNA from six anaplastic oligodendroglioma patients.

text: Homo sapiens


text: Tampere University of Technology

text: live

text: Generic

text: Pooled small RNA from commercial normal adult brain tissue.

text: Homo sapiens


human cerebellum PacBio long reads

text: Stanford

text: live

text: Generic

text: human cerebellum PacBio long reads， prepared by Jason Underwood

text: Homo sapiens

text: human cerebellum


Solea solea larvae

text: University of Padova

text: live

text: Generic

text: 1 to 33 days post hatching

characteristic: age

text: common sole

characteristic: breed

text: whole larvae

characteristic: isolation-source

text: Solea solea

text: General Sample for Solea solea


AB/P1 set 2

characteristic: External Id

text: Technion

characteristic: INSDC center name

text: live

text: Generic

text: C. elegans CEL-Seq data from one IVT containing six matched pairs of AB and P1 blastomeres (a total of twelve blastomeres from six embryos), plus one P0 zygote.

text: Caenorhabditis elegans

text: C. elegans AB and P1 blastomeres, set 2


mix sample

text: College of Agronomy, Guangxi University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: eudicotyledons

text: the mix sample of three stages: 0 day, 3 days and 7days after cutting


name: 14 days seedling of Caragana Intermedia Sample

text: Shanghai Institutes for Biological Sciences

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Germplasm resources collection and plant materials treatments Seeds of C. intermedia used in the present study were collected from pods of C. intermedia which growing in desert habitat in Inner Mongolia, China. The pods splits into two valves with the seeds attached to one edge of the valves. Seeds were washed five times with tap water, and then germinated in sand. Two weeks later, the young seedlings were selected and prepared for the total RNA isolation. The entire 14 days seedling of C. intermedia plant tissues were snap-frozen and ground under liquid nitrogen before RNA extraction.

text: Caragana


liver

text: University of Trieste

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Latimeria menadoensis

text: Latimeria menadoensis liver transcriptome


Testis

text: University of Trieste

text: live

text: Generic

characteristic: SRA accession

text: Latimeria menadoensis

characteristic: organism

text: Latimeria menadoensis testis transcriptome


text: Laboratory of Cellular and Developmental Biology, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health

text: live

text: Generic

text: Drosophila melanogaster

text: BG3 cells

text: Input

characteristic: title


text: live

text: Generic

text: Su(Hw)

characteristic: antibody

text: Drosophila melanogaster

text: BG3 cells

text: Su(Hw)


text: live

text: Generic

text: Shep, guinea pig

text: Drosophila melanogaster

text: BG3 cells

text: Shep


text: live

text: Generic

text: Shep, rabbit

text: Drosophila melanogaster

text: BG3 cells

text: Shep (alternate antibody)


text: live

text: Generic

text: Mod(mdg4)2.2, guinea pig

text: Drosophila melanogaster

text: BG3 cells

text: Mod(mdg4)2.2 (alternate antibody)


text: live

text: Generic

text: Mod(mdg4)2.2, rabbit

text: Drosophila melanogaster

text: BG3 cells


text: IV-B

characteristic: Community State Type

text: Institute for Genome Sciences University of MD School of Medicine

text: live

text: Generic

text: High

characteristic: nugent category

text: human metagenome

characteristic: subject id

text: human metagenome LIVMhiv302V3

text: Placebo

characteristic: treatment

characteristic: visit


characteristic: External Id

text: Fudan university

text: live

text: Generic

text: 5hmC mouse polyclonal antibody (Active Motif, catalog #39769)

characteristic: cell line

text: Mus musculus

text: hMeDIP

characteristic: sequencing type

text: No

characteristic: sirna or shrna treatment

text: ESCs

characteristic: strain


text: Fudan university

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Mus musculus

text: input

text: No

text: ESCs


text: Fudan university

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: ES-derived neural progenitor cells

text: Mus musculus

characteristic: organism

text: hMeDIP

text: No

text: NPCs

characteristic: title


text: Fudan university

text: live

text: Generic

text: ES-derived neural progenitor cells

text: Mus musculus

text: input

text: No

text: NPCs


text: IV-A

characteristic: Community State Type

text: live

text: Generic

text: Low

characteristic: nugent category

text: human metagenome

characteristic: subject id

text: human metagenome LIVMhiv822V2

text: Placebo

characteristic: treatment


characteristic: External Id

text: Bernstein Lab, Oncological Sciences, Mount Sinai School of Medicine

text: live

text: Generic

text: Input control

characteristic: antibody

text: wildtype

characteristic: genotype

text: Mus musculus

text: Dermal Fibroblasts (wt)

text: Input control


characteristic: INSDC center name

text: live

text: Generic

text: mH2A1 ChIP (ab37264, ABCAM)

text: wildtype

text: Mus musculus

text: Dermal Fibroblasts (wt)


characteristic: INSDC first public

text: live

text: Generic

text: H3K27me3 (Millipore, 07-449)

text: wildtype

text: Mus musculus

text: Dermal Fibroblasts (wt)


characteristic: INSDC last update

text: live

text: Generic

text: H3K27ac (Abcam 4729)

text: wildtype

text: Mus musculus

text: Dermal Fibroblasts (wt)


characteristic: INSDC secondary accession

text: live

text: Generic

text: mH2A1 ChIP (ab37264, ABCAM)

text: macroH2A double KO

text: Mus musculus

text: Dermal Fibroblasts (macroH2A double KO)


text: live

characteristic: INSDC status

text: Generic

text: H3K27me3 (Millipore, 07-449)

text: macroH2A double KO

text: Mus musculus

text: Dermal Fibroblasts (macroH2A double KO)


text: live

text: Generic

characteristic: NCBI submission model

text: H3K27ac (Abcam 4729)

text: macroH2A double KO

text: Mus musculus

text: Dermal Fibroblasts (macroH2A double KO)


text: Weizmann Institute of Science

text: live

text: Generic

characteristic: NCBI submission package

characteristic: o-methyl spike-in hsa-mir-211

characteristic: o-methyl spike-in hsa-mir-219-5p

characteristic: o-methyl spike-in hsa-mir-429

text: Homo sapiens

characteristic: precursor spike-in hsa-mir-147

characteristic: precursor spike-in hsa-mir-338-3p

characteristic: precursor spike-in hsa-mir-383

text: placenta

characteristic: spike-in hsa-mir-147

characteristic: spike-in hsa-mir-211

characteristic: spike-in hsa-mir-219-5p

characteristic: spike-in hsa-mir-338-3p

characteristic: spike-in hsa-mir-383

characteristic: spike-in hsa-mir-429


characteristic: External Id

text: TSRI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: SRA accession

text: pro-B cells

characteristic: cell type

characteristic: chip antibody 1

characteristic: chip antibody 2

text: Abcam

characteristic: chip antibody manufacturer 1

text: Santa Cruz

characteristic: chip antibody manufacturer 2

text: Rag -/-

characteristic: genotype

text: Mus musculus

characteristic: organism

text: Rag1 -/- pro-B cells

characteristic: strain

text: YY1 Chip-Seq

characteristic: title


text: TSRI

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: pro-B cells

text: Rag -/-

text: Mus musculus

text: Rag1 -/- pro-B cells

text: Chip-Seq input control


characteristic: External Id

text: Molecular and Cellular Basis of Embryonic Development, Max Delbrück Center for Molecular Medicine

characteristic: INSDC center name

text: live

text: Generic

characteristic: age

text: Mus musculus

text: foregut, E8.5

text: foregut

characteristic: tissue

text: foregut, E8.5


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: SRA accession

text: Mus musculus

text: medial foregut, E8.5

text: medial foregut

text: medial foregut, E8.5


text: live

text: Generic

text: Mus musculus

text: liver, E10.5

text: liver

text: liver, E10.5


text: live

text: Generic

text: Mus musculus

text: ventral pancreas, E10.5

text: ventral pancreas

text: ventral pancreas, E10.5


text: live

text: Generic

text: Mus musculus

text: dorsal pancreas, E10.5

text: dorsal pancreas

text: dorsal pancreas, E10.5


text: Broad Institute

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: Candida albicans P60002

characteristic: sample name

text: Generic sample from Candida albicans P60002


text: Broad Institute

text: live

text: Generic

text: Generic

text: Candida albicans P78048

text: Generic sample from Candida albicans P78048


text: Broad Institute

text: live

text: Generic

text: Generic

text: Candida albicans P57055

text: Generic sample from Candida albicans P57055


text: Broad Institute

text: live

text: Generic

text: Generic

text: Candida albicans P75016

text: Generic sample from Candida albicans P75016


text: Broad Institute

text: live

text: Generic

text: Generic

text: Candida albicans P94015

text: Generic sample from Candida albicans P94015


text: Broad Institute

text: live

text: Generic

text: Generic

text: Candida albicans P76055

text: Generic sample from Candida albicans P76055


text: Broad Institute

text: live

text: Generic

text: Generic

text: Candida albicans P78042

text: Generic sample from Candida albicans P78042


text: Broad Institute

text: live

text: Generic

text: Generic

text: Candida albicans P76067

text: Generic sample from Candida albicans P76067


text: Broad Institute

text: live

text: Generic

text: Generic

text: Candida albicans P37037

text: Generic sample from Candida albicans P37037


text: Broad Institute

text: live

text: Generic

text: Generic

text: Candida albicans P75063

text: Generic sample from Candida albicans P75063


text: National Center for Genome Resources

text: live

text: Generic

text: Generic

text: Solanum lycopersicum

characteristic: sample id

text: Total RNA

characteristic: sample type

text: Lycopersicon esculentum 5DWR_I


text: National Center for Genome Resources

text: live

text: Generic

text: Generic

text: Solanum lycopersicum

characteristic: organism

text: Total RNA

text: Lycopersicon esculentum 5BWR_I


text: National Center for Genome Resources

text: live

text: Generic

text: Generic

text: Solanum lycopersicum

text: Total RNA

text: Lycopersicon esculentum 5DLR_I

characteristic: title


text: National Center for Genome Resources

characteristic: INSDC secondary accession

text: live

text: Generic

text: Generic

text: Solanum lycopersicum

text: Total RNA

text: Lycopersicon esculentum 5BLR_I


text: National Center for Genome Resources

text: live

characteristic: INSDC status

text: Generic

text: Generic

text: Solanum lycopersicum

text: Total RNA

text: Lycopersicon esculentum 5DRT_I


text: National Center for Genome Resources

text: live

text: Generic

characteristic: NCBI submission model

text: Generic

text: Solanum lycopersicum

text: Total RNA

text: Lycopersicon esculentum 5BRT_I


text: National Center for Genome Resources

text: live

text: Generic

characteristic: NCBI submission package

text: Generic

text: Solanum lycopersicum

text: Total RNA

text: Lycopersicon esculentum 5DWR_II


characteristic: External Id

text: National Center for Genome Resources

text: live

text: Generic

text: Generic

text: Solanum lycopersicum

text: Total RNA

text: Lycopersicon esculentum 5BWR_II


text: National Center for Genome Resources

characteristic: INSDC center name

text: live

text: Generic

text: Generic

text: Solanum lycopersicum

text: Total RNA

text: Lycopersicon esculentum 5dLR_II


text: National Center for Genome Resources

text: live

text: Generic

text: Generic

text: Solanum lycopersicum

text: Total RNA

text: Lycopersicon esculentum 5BLR_II


text: National Center for Genome Resources

text: live

text: Generic

text: Generic

text: Solanum lycopersicum

text: Total RNA

text: Lycopersicon esculentum 5DRT_II


text: National Center for Genome Resources

text: live

text: Generic

text: Generic

text: Solanum lycopersicum

text: Total RNA

text: Lycopersicon esculentum 5BRT_II


text: National Center for Genome Resources

text: live

text: Generic

text: Generic

text: Solanum lycopersicum

text: Total RNA

text: Lycopersicon esculentum 5NWR_I


text: National Center for Genome Resources

text: live

text: Generic

text: Generic

text: Solanum lycopersicum

text: Total RNA

text: Lycopersicon esculentum 5NLR_I


text: National Center for Genome Resources

text: live

text: Generic

text: Generic

text: Solanum lycopersicum

text: Total RNA

text: Lycopersicon esculentum 5NRT_I


text: National Center for Genome Resources

text: live

text: Generic

text: Generic

text: Solanum lycopersicum

text: Total RNA

text: Lycopersicon esculentum 5NWR_II


text: National Center for Genome Resources

text: live

text: Generic

text: Generic

text: Solanum lycopersicum

text: Total RNA

text: Lycopersicon esculentum 5NLR_II


text: National Center for Genome Resources

text: live

text: Generic

text: Generic

text: Solanum lycopersicum

text: Total RNA

text: Lycopersicon esculentum 5NRT_II


text: DSMZ German Collection of Microorganisms and Cell Cultures

text: live

text: Pathogen.env

characteristic: culture collection

text: Germany

characteristic: geo loc name

text: 2 year old girl with mycobacterial lymphodermitis

characteristic: isolation source

text: Mycobacterium heidelbergense

text: Int J Syst Bacteriol, 48, 627-628 (1998); J Clin Microbiol, 35, 3203-3209 (1997)

text: German Collection of Microorganisms and Cell Cultures (DSMZ)

characteristic: repository

characteristic: risk group

text: Homo sapiens

characteristic: specific host

text: DSM 44554

characteristic: strain

text: Pathogen sample Mycobacterium heidelbergense DSM 44554

text: non-type strain

characteristic: type status


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: Germany

text: 2 years old gastroenteritis patient

text: Escherichia coli

characteristic: serovar

text: Homo sapiens

text: DSM 8579

text: Pathogen sample Escherichia coli DSM 8579

text: toxin production

characteristic: toxin producer

text: non-type strain

text: zoonotic agent

characteristic: zoonotic agent


text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: Spain

text: 20-day-old lamb (congestive lungs)

text: Psychrobacter pulmonis

characteristic: organism

text: animals, vertebrates

characteristic: pathogenicity

text: Int J Syst Evol Microbiol, 53, 415-419 (2003)

text: DSM 16214

text: Pathogen sample Psychrobacter pulmonis DSM 16214

characteristic: title

text: type strain of Psychrobacter pulmonis

characteristic: type material

text: type strain


characteristic: External Id

characteristic: INSDC center name

text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: culture collection

text: USA

characteristic: geo loc name

text: 27-year-old male in farming accident, left thigh wound

characteristic: isolation source

text: Burkholderia oklahomensis

text: Int J Syst Evol Microbiol, 56, 2171-2176 (2006)

text: Homo sapiens

text: DSM 21774

text: Pathogen sample Burkholderia oklahomensis DSM 21774

text: type strain of Burkholderia oklahomensis

text: type strain


characteristic: INSDC first public

text: live

text: Pathogen.env

text: Japan

text: a biopsy specimen from human mycetoma

text: Nocardia veterana

text: Int J Syst Evol Microbiol, 51, 933-936 (2001)

characteristic: repository

characteristic: risk group

text: Homo sapiens

characteristic: specific host

text: DSM 44538

characteristic: strain

text: Pathogen sample Nocardia veterana DSM 44538

text: non-type strain

characteristic: type status


text: Duke University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: mixed environmental DNA sample from Pacific Ocean, station ALOHA (22.75°N, 158°W), 100 m, Sept 2009 16S (eubacteria) PCR

characteristic: description

text: marine metagenome

text: DNA 100m


text: IV-A

characteristic: Community State Type

characteristic: External Id

text: Institute for Genome Sciences University of MD School of Medicine

characteristic: INSDC center name

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: Low

characteristic: nugent category

text: human metagenome

characteristic: organism

characteristic: subject id

text: human metagenome LIVMhiv822V4

characteristic: title

text: Placebo

characteristic: treatment

characteristic: visit


text: IV-A

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv822V6

text: Placebo


text: II

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Generic

text: Int

text: human metagenome

text: human metagenome LIVMhiv825V2


text: IV-A

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv822V3

text: Placebo


text: IV-A

text: live

text: Generic

characteristic: SRA accession

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv824V5


text: II

characteristic: Community State Type

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv824V6


text: IV-B

characteristic: External Id

text: live

text: Generic

text: Generic

text: High

text: human metagenome

text: human metagenome LIVMhiv302V4

text: Placebo


text: IV-B

characteristic: INSDC center name

text: live

text: Generic

text: Generic

text: High

text: human metagenome

text: human metagenome LIVMhiv302V5

text: Placebo


text: IV-A

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: Int

text: human metagenome

text: human metagenome LIVMhiv824V4


text: II

text: live

text: Generic

text: Generic

text: Int

characteristic: nugent category

text: human metagenome

text: human metagenome LIVMhiv825V3


text: IV-A

text: live

text: Generic

text: Generic

text: High

text: human metagenome

characteristic: organism

text: human metagenome LIVMhiv302V6

text: Placebo


text: IV-A

text: live

text: Generic

text: Generic

text: Int

text: human metagenome

characteristic: subject id

text: human metagenome LIVMhiv825V4


text: III

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv304V5

characteristic: title

text: Placebo


text: II

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv824V3

characteristic: treatment


text: IV-A

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv825V5

characteristic: visit


text: II

characteristic: INSDC first public

text: live

text: Generic

text: Generic

text: Int

text: human metagenome

text: human metagenome LIVMhiv824V2


text: III

text: live

text: Generic

characteristic: NCBI submission package

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv304V3

text: Placebo


text: IV-B

characteristic: INSDC last update

text: live

text: Generic

text: Generic

text: High

text: human metagenome

text: human metagenome LIVMhiv303V3

text: CS


text: III

characteristic: INSDC secondary accession

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv304V4

text: Placebo


text: II

text: live

characteristic: INSDC status

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv303V6

text: CS


text: III

text: live

text: Generic

characteristic: NCBI submission model

text: Generic

text: Int

text: human metagenome

text: human metagenome LIVMhiv826V2

text: CS


text: I

text: live

text: Generic

characteristic: SRA accession

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv827V6

text: Placebo


text: II

characteristic: Community State Type

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv304V6

text: Placebo


text: III

characteristic: External Id

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv305V2


text: I

characteristic: INSDC center name

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv827V4

text: Placebo


text: III

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: Low

text: human metagenome

text: human metagenome LIVMhiv307V3

text: Placebo


text: I

text: live

text: Generic

text: Generic

text: Low

characteristic: nugent category

text: human metagenome

text: human metagenome LIVMhiv827V2

text: Placebo


text: IV-A

text: live

text: Generic

text: Generic

text: Int

text: human metagenome

characteristic: organism

text: human metagenome LIVMhiv826V6

text: CS


text: IV-A

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

characteristic: subject id

text: human metagenome LIVMhiv307V6

text: Placebo


text: III

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv308V2

characteristic: title


text: IV-A

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv306V5

characteristic: treatment


text: I

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv306V2

characteristic: visit


text: III

characteristic: INSDC first public

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv306V6


text: III

text: live

text: Generic

characteristic: NCBI submission package

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv308V3


text: IV-A

characteristic: INSDC last update

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv307V2

text: Placebo


text: I

characteristic: INSDC secondary accession

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv827V3

text: Placebo


text: I

text: live

characteristic: INSDC status

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv827V5

text: Placebo


text: IV-A

text: live

text: Generic

characteristic: NCBI submission model

text: Generic

text: Int

text: human metagenome

text: human metagenome LIVMhiv305V6


text: IV-A

text: live

text: Generic

characteristic: SRA accession

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv305V4


text: III

characteristic: Community State Type

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv307V4

text: Placebo


text: IV-B

characteristic: External Id

text: live

text: Generic

text: Generic

text: High

text: human metagenome

text: human metagenome LIVMhiv836V2


text: I

characteristic: INSDC center name

text: live

text: Generic

text: Generic

text: High

text: human metagenome

text: human metagenome LIVMhiv835V4


text: IV-A

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: High

text: human metagenome

text: human metagenome LIVMhiv836V4


text: IV-B

text: live

text: Generic

text: Generic

text: High

characteristic: nugent category

text: human metagenome

text: human metagenome LIVMhiv836V3


text: II

text: live

text: Generic

text: Generic

text: High

text: human metagenome

characteristic: organism

text: human metagenome LIVMhiv309V5

text: Placebo


text: I

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

characteristic: subject id

text: human metagenome LIVMhiv830V5

text: Placebo


text: I

text: live

text: Generic

text: Generic

text: Int

text: human metagenome

text: human metagenome LIVMhiv833V2

characteristic: title

text: CS


text: IV-B

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv833V3

text: CS

characteristic: treatment


text: II

text: live

text: Generic

text: Generic

text: Int

text: human metagenome

text: human metagenome LIVMhiv309V4

text: Placebo

characteristic: visit


text: I

characteristic: INSDC first public

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv829V2

text: CS


text: IV-B

text: live

text: Generic

characteristic: NCBI submission package

text: Generic

text: Int

text: human metagenome

text: human metagenome LIVMhiv833V4

text: CS


text: III

characteristic: INSDC last update

text: live

text: Generic

text: Generic

text: High

text: human metagenome

text: human metagenome LIVMhiv835V2


text: II

characteristic: INSDC secondary accession

text: live

text: Generic

text: Generic

text: Int

text: human metagenome

text: human metagenome LIVMhiv309V3

text: Placebo


text: IV-A

text: live

characteristic: INSDC status

text: Generic

text: Generic

text: High

text: human metagenome

text: human metagenome LIVMhiv836V6


text: III

text: live

text: Generic

characteristic: NCBI submission model

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv830V4

text: Placebo


text: IV-B

text: live

text: Generic

characteristic: SRA accession

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv833V5

text: CS


text: III

characteristic: Community State Type

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv308V5


text: II

characteristic: External Id

text: live

text: Generic

text: Generic

text: High

text: human metagenome

text: human metagenome LIVMhiv835V3


text: III

characteristic: INSDC center name

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv830V3

text: Placebo


text: IV-B

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: High

text: human metagenome

text: human metagenome LIVMhiv312V2

text: CS


text: IV-A

text: live

text: Generic

text: Generic

text: Low

characteristic: nugent category

text: human metagenome

text: human metagenome LIVMhiv312V6

text: CS


text: III

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

characteristic: organism

text: human metagenome LIVMhiv311V6

text: CS


text: I

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

characteristic: subject id

text: human metagenome LIVMhiv313V2


text: IV-B

text: live

text: Generic

text: Generic

text: High

text: human metagenome

text: human metagenome LIVMhiv312V3

characteristic: title

text: CS


text: III

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv311V5

text: CS

characteristic: treatment


text: IV-A

text: live

text: Generic

text: Generic

text: Int

text: human metagenome

text: human metagenome LIVMhiv316V4

characteristic: visit


text: III

characteristic: INSDC first public

text: live

text: Generic

text: Generic

text: Int

text: human metagenome

text: human metagenome LIVMhiv314V3

text: CS


text: III

text: live

text: Generic

characteristic: NCBI submission package

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv315V5

text: Placebo


text: I

characteristic: INSDC last update

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv315V6

text: Placebo


text: I

characteristic: INSDC secondary accession

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv315V2

text: Placebo


text: III

text: live

characteristic: INSDC status

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv315V4

text: Placebo


text: IV-A

text: live

text: Generic

characteristic: NCBI submission model

text: Generic

text: Int

text: human metagenome

text: human metagenome LIVMhiv314V6

text: CS


text: III

text: live

text: Generic

characteristic: SRA accession

text: Generic

text: High

text: human metagenome

text: human metagenome LIVMhiv316V3


text: IV-B

characteristic: Community State Type

text: live

text: Generic

text: Generic

text: High

text: human metagenome

text: human metagenome LIVMhiv313V6


text: III

characteristic: External Id

text: live

text: Generic

text: Generic

text: Int

text: human metagenome

text: human metagenome LIVMhiv314V2

text: CS


text: III

characteristic: INSDC center name

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv311V4

text: CS


text: II

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: Low

text: human metagenome

text: human metagenome LIVMhiv316V5


text: I

text: live

text: Generic

text: Generic

text: Low

characteristic: nugent category

text: human metagenome

text: human metagenome LIVMhiv323V3

text: Placebo


text: I

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

characteristic: organism

text: human metagenome LIVMhiv319V3

text: CS


text: II

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

characteristic: subject id

text: human metagenome LIVMhiv318V5

text: CS


text: IV-B

text: live

text: Generic

text: Generic

text: High

text: human metagenome

text: human metagenome LIVMhiv322V2

characteristic: title

text: CS


text: II

text: live

text: Generic

text: Generic

text: High

text: human metagenome

text: human metagenome LIVMhiv318V3

text: CS

characteristic: treatment


text: II

text: live

text: Generic

text: Generic

text: Int

text: human metagenome

text: human metagenome LIVMhiv318V2

text: CS

characteristic: visit


text: I

characteristic: INSDC first public

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv317V2

text: CS


text: I

text: live

text: Generic

characteristic: NCBI submission package

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv317V3

text: CS


text: I

characteristic: INSDC last update

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv323V2

text: Placebo


text: I

characteristic: INSDC secondary accession

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv319V2

text: CS


text: I

text: live

characteristic: INSDC status

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv319V4

text: CS


text: I

text: live

text: Generic

characteristic: NCBI submission model

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv323V4

text: Placebo


text: IV-B

text: live

text: Generic

characteristic: SRA accession

text: Generic

text: High

text: human metagenome

text: human metagenome LIVMhiv322V3

text: CS


text: I

characteristic: Community State Type

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv324V3

text: CS


text: I

characteristic: External Id

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv325V2


text: III

characteristic: INSDC center name

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv325V3


text: I

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: Low

text: human metagenome

text: human metagenome LIVMhiv324V6

text: CS


text: I

text: live

text: Generic

text: Generic

text: Low

characteristic: nugent category

text: human metagenome

text: human metagenome LIVMhiv324V2

text: CS


text: I

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

characteristic: organism

text: human metagenome LIVMhiv323V5

text: Placebo


text: I

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

characteristic: subject id

text: human metagenome LIVMhiv325V6


text: I

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv325V4

characteristic: title


text: IV-B

text: live

text: Generic

text: Generic

text: High

text: human metagenome

text: human metagenome LIVMhiv326V4

text: Placebo

characteristic: treatment


text: IV-B

text: live

text: Generic

text: Generic

text: Int

text: human metagenome

text: human metagenome LIVMhiv326V5

text: Placebo

characteristic: visit


text: IV-B

characteristic: INSDC first public

text: live

text: Generic

text: Generic

text: High

text: human metagenome

text: human metagenome LIVMhiv326V6

text: Placebo


text: III

text: live

text: Generic

characteristic: NCBI submission package

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv329V2


text: IV-B

characteristic: INSDC last update

text: live

text: Generic

text: Generic

text: Int

text: human metagenome

text: human metagenome LIVMhiv326V2

text: Placebo


text: I

characteristic: INSDC secondary accession

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv325V5


text: I

text: live

characteristic: INSDC status

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv323V6

text: Placebo


text: I

text: live

text: Generic

characteristic: NCBI submission model

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv823V6

text: CS


text: IV-A

text: live

text: Generic

characteristic: SRA accession

text: Generic

text: High

text: human metagenome

text: human metagenome LIVMhiv837V4


text: IV-A

characteristic: Community State Type

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv303V4

text: CS


text: IV-A

characteristic: External Id

text: live

text: Generic

text: Generic

text: High

text: human metagenome

text: human metagenome LIVMhiv326V3

text: Placebo


text: IV-A

characteristic: INSDC center name

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv324V4

text: CS


text: IV-A

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: Int

text: human metagenome

text: human metagenome LIVMhiv329V5


text: IV-A

text: live

text: Generic

text: Generic

text: Int

characteristic: nugent category

text: human metagenome

text: human metagenome LIVMhiv329V4


text: III

text: live

text: Generic

text: Generic

text: High

text: human metagenome

characteristic: organism

text: human metagenome LIVMhiv329V3


text: IV-B

text: live

text: Generic

text: Generic

text: High

text: human metagenome

characteristic: subject id

text: human metagenome LIVMhiv837V3


text: IV-B

text: live

text: Generic

text: Generic

text: High

text: human metagenome

text: human metagenome LIVMhiv837V2

characteristic: title


text: IV-B

text: live

text: Generic

text: Generic

text: High

text: human metagenome

text: human metagenome LIVMhiv835V5

characteristic: treatment


text: IV-B

text: live

text: Generic

text: Generic

text: High

text: human metagenome

text: human metagenome LIVMhiv312V5

text: CS

characteristic: visit


text: IV-A

characteristic: INSDC first public

text: live

text: Generic

text: Generic

text: Int

text: human metagenome

text: human metagenome LIVMhiv823V5

text: CS


text: IV-A

text: live

text: Generic

characteristic: NCBI submission package

text: Generic

text: Int

text: human metagenome

text: human metagenome LIVMhiv826V4

text: CS


text: IV-A

characteristic: INSDC last update

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv314V4

text: CS


text: II

characteristic: INSDC secondary accession

text: live

text: Generic

text: Generic

text: High

text: human metagenome

text: human metagenome LIVMhiv825V6


text: IV-A

text: live

characteristic: INSDC status

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv315V3

text: Placebo


text: IV-A

text: live

text: Generic

characteristic: NCBI submission model

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv309V2

text: Placebo


text: IV-A

text: live

text: Generic

characteristic: SRA accession

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv308V4


text: IV-B

characteristic: Community State Type

text: live

text: Generic

text: Generic

text: Int

text: human metagenome

text: human metagenome LIVMhiv322V4

text: CS


text: II

characteristic: External Id

text: live

text: Generic

text: Generic

text: High

text: human metagenome

text: human metagenome LIVMhiv318V6

text: CS


text: IV-A

characteristic: INSDC center name

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv835V6


text: I

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: Low

text: human metagenome

text: human metagenome LIVMhiv830V2

text: Placebo


text: IV-B

text: live

text: Generic

text: Generic

text: Int

characteristic: nugent category

text: human metagenome

text: human metagenome LIVMhiv836V5


text: IV-A

text: live

text: Generic

text: Generic

text: Int

text: human metagenome

characteristic: organism

text: human metagenome LIVMhiv314V5

text: CS


text: IV-B

text: live

text: Generic

text: Generic

text: High

text: human metagenome

characteristic: subject id

text: human metagenome LIVMhiv313V4


text: III

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv826V3

characteristic: title

text: CS


text: IV-A

text: live

text: Generic

text: Generic

text: Int

text: human metagenome

text: human metagenome LIVMhiv313V3

characteristic: treatment


text: IV-A

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv311V2

text: CS

characteristic: visit


text: IV-A

characteristic: INSDC first public

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv309V6

text: Placebo


text: IV-A

text: live

text: Generic

characteristic: NCBI submission package

text: Generic

text: High

text: human metagenome

text: human metagenome LIVMhiv837V6


text: IV-A

characteristic: INSDC last update

text: live

text: Generic

text: Generic

text: Int

text: human metagenome

text: human metagenome LIVMhiv317V4

text: CS


text: IV-A

characteristic: INSDC secondary accession

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv823V4

text: CS


text: IV-A

text: live

characteristic: INSDC status

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv316V2


text: IV-A

text: live

text: Generic

characteristic: NCBI submission model

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv829V5

text: CS


text: IV-A

text: live

text: Generic

characteristic: SRA accession

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv306V3


text: IV-A

characteristic: Community State Type

text: live

text: Generic

text: Generic

text: Int

text: human metagenome

text: human metagenome LIVMhiv303V5

text: CS


text: IV-B

characteristic: External Id

text: live

text: Generic

text: Generic

text: Int

text: human metagenome

text: human metagenome LIVMhiv312V4

text: CS


text: IV-A

characteristic: INSDC center name

text: live

text: Generic

text: Generic

text: Low

text: human metagenome

text: human metagenome LIVMhiv826V5

text: CS


text: Duke University

text: live

text: Generic

text: mixed environmental RNA sample from Pacific Ocean, station ALOHA (22.75°N, 158°W), 25 m, Sept 2009 16S (eubacteria) PCR

characteristic: description

text: marine metagenome

text: RNA 25m


text: Duke University

text: live

text: Generic

text: mixed environmental RNA sample from Pacific Ocean, station ALOHA (22.75°N, 158°W), 100 m, Sept 2009 16S (eubacteria) PCR

text: marine metagenome

text: RNA 100m


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: analyte type

text: eMERGE

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: GRU

text: Yes

characteristic: is technical control

text: SNP Genotypes (Array)

characteristic: molecular data type

text: Homo sapiens

text: female

characteristic: sex

text: Case-Control

characteristic: study design

characteristic: study name

text: No

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

text: eMERGE

characteristic: submitter handle

text: DNA sample from a human female participant in the dbGaP study A Study of the Genetic Causes of Complex Pediatric Disorders


text: dbGaP

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

text: eMERGE

text: GRU

text: Yes

text: SNP Genotypes (Array)

text: Homo sapiens

characteristic: organism

text: female

text: Case-Control

text: A Study of the Genetic Causes of Complex Pediatric Disorders

text: No

text: eMERGE

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

text: DNA

characteristic: analyte type

text: eMERGE

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: GRU

text: Yes

text: SNP Genotypes (Array)

text: Homo sapiens

text: male

text: Case-Control

text: No

text: eMERGE

text: DNA sample from a human male participant in the dbGaP study A Study of the Genetic Causes of Complex Pediatric Disorders


text: dbGaP

text: live

text: Generic

text: DNA

text: TCGA

text: Blood Derived Normal

characteristic: body site

text: GRU

text: No

characteristic: is tumor

text: Homo sapiens

text: male

characteristic: sex

text: Tumor vs. Matched-Normal

characteristic: study design

characteristic: study name

text: TCGA

text: Non-tumor DNA sample from Blood Derived Normal of a human male participant in the dbGaP study Molecular Characterization of Human Colorectal Cancer (CRC)


text: dbGaP

characteristic: INSDC first public

text: live

text: Generic

text: RNA

text: TCGA

text: Primary Tumor

text: GRU

text: Yes

text: Homo sapiens

text: male

text: Tumor vs. Matched-Normal

characteristic: submitted sample id

characteristic: submitted subject id

text: TCGA

characteristic: submitter handle

text: Tumor RNA sample from Primary Tumor of a human male participant in the dbGaP study Molecular Characterization of Human Colorectal Cancer (CRC)


text: dbGaP

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

text: TCGA

text: Primary Tumor

text: GRU

text: Yes

text: Homo sapiens

text: male

text: Tumor vs. Matched-Normal

text: TCGA

text: Tumor DNA sample from Primary Tumor of a human male participant in the dbGaP study Molecular Characterization of Human Colorectal Cancer (CRC)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

text: Repli-G (Qiagen) DNA

text: TCGA

text: Blood Derived Normal

text: GRU

text: No

text: Homo sapiens

characteristic: organism

text: male

text: Tumor vs. Matched-Normal

text: TCGA

text: Non-tumor Repli-G (Qiagen) DNA sample from Blood Derived Normal of a human male participant in the dbGaP study Molecular Characterization of Human Colorectal Cancer (CRC)

characteristic: title


text: dbGaP

text: live

text: Generic

text: Repli-G (Qiagen) DNA

characteristic: analyte type

text: TCGA

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Primary Tumor

characteristic: body site

text: GRU

text: Yes

text: Homo sapiens

text: male

text: Tumor vs. Matched-Normal

text: TCGA

text: Tumor Repli-G (Qiagen) DNA sample from Primary Tumor of a human male participant in the dbGaP study Molecular Characterization of Human Colorectal Cancer (CRC)


text: dbGaP

text: live

text: Generic

text: TCGA

text: GRU

text: Homo sapiens

text: male

characteristic: sex

text: Tumor vs. Matched-Normal

characteristic: study design

characteristic: study name

text: TCGA

text: Sample from a human male participant in the dbGaP study Molecular Characterization of Human Colorectal Cancer (CRC)


text: dbGaP

characteristic: INSDC first public

text: live

text: Generic

text: DNA

text: TCGA

text: Blood Derived Normal

text: GRU

text: No

characteristic: is tumor

text: Homo sapiens

text: male

text: Tumor vs. Matched-Normal

text: Molecular Characterization of Human Colorectal Cancer (CRC)

characteristic: submitted sample id

characteristic: submitted subject id

text: TCGA


text: dbGaP

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Repli-G (Qiagen) DNA

text: TCGA

text: Primary Tumor

text: GRU

text: Yes

text: Homo sapiens

text: male

text: Tumor vs. Matched-Normal

text: TCGA

characteristic: submitter handle


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission package

text: DNA

text: TCGA

text: Primary Tumor

text: GRU

text: Yes

text: Homo sapiens

characteristic: organism

text: male

text: Tumor vs. Matched-Normal

text: TCGA


text: dbGaP

text: live

text: Generic

text: TCGA

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: GRU

text: Homo sapiens

text: male

text: Tumor vs. Matched-Normal

text: TCGA

characteristic: title


text: dbGaP

text: live

text: Generic

text: Repli-G (Qiagen) DNA

characteristic: analyte type

text: TCGA

text: Blood Derived Normal

characteristic: body site

text: GRU

text: No

text: Homo sapiens

text: male

characteristic: sex

text: Tumor vs. Matched-Normal

characteristic: study design

text: TCGA


text: dbGaP

characteristic: INSDC first public

text: live

text: Generic

text: Total RNA

text: TCGA

text: Primary Tumor

text: GRU

text: Yes

characteristic: is tumor

text: Homo sapiens

text: male

text: Tumor vs. Matched-Normal

characteristic: study name

characteristic: submitted sample id

text: TCGA

text: Tumor Total RNA sample from Primary Tumor of a human male participant in the dbGaP study Molecular Characterization of Human Colorectal Cancer (CRC)


text: Stanford University School of Medicine

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

characteristic: collection date

text: L4, young adult

characteristic: dev-stage

text: multiple

characteristic: genotype

text: USA

characteristic: geo loc name

characteristic: isolate

characteristic: label

text: Caenorhabditis elegans

text: whole organism

characteristic: sample-type

text: hermaphrodite

characteristic: strain

text: General Sample for Caenorhabditis elegans


characteristic: External Id

text: Genome Research Foundation

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

text: Homo sapiens

characteristic: organism

characteristic: title


gts.csp.root.emf

text: Institute of Microbiology, CAS

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Pool of the following samples Sample Barcode Description CSP01 ACACACTGC ectomycorrhizal fungi on mixed root samples in Gutianshan CSP02 ACACGTCAC ectomycorrhizal fungi on mixed root samples in Gutianshan CSP03 ACAGACAGC ectomycorrhizal fungi on mixed root samples in Gutianshan CSP04 ACAGCTCAC ectomycorrhizal fungi on mixed root samples in Gutianshan CSP05 ACGAGATGC ectomycorrhizal fungi on mixed root samples in Gutianshan CSP06 ACGTACGTC ectomycorrhizal fungi on mixed root samples in Gutianshan CSP07 ACTCACAGC ectomycorrhizal fungi on mixed root samples in Gutianshan CSP08 ACTCGTCTC ectomycorrhizal fungi on mixed root samples in Gutianshan CSP09 ACTGACTGC ectomycorrhizal fungi on mixed root samples in Gutianshan CSP10 ACTGCTCTC ectomycorrhizal fungi on mixed root samples in Gutianshan CSP11 AGACACAGC ectomycorrhizal fungi on mixed root samples in Gutianshan CSP12 AGACGTCTC ectomycorrhizal fungi on mixed root samples in Gutianshan CSP13 AGAGACTGC ectomycorrhizal fungi on mixed root samples in Gutianshan CSP14 AGAGCTCTC ectomycorrhizal fungi on mixed root samples in Gutianshan CSP15 AGCAGATGC ectomycorrhizal fungi on mixed root samples in Gutianshan CSP16 AGCTACGTC ectomycorrhizal fungi on mixed root samples in Gutianshan CSP17 AGTCACTGC ectomycorrhizal fungi on mixed root samples in Gutianshan CSP18 AGTCGTCAC ectomycorrhizal fungi on mixed root samples in Gutianshan CSP19 AGTGACAGC ectomycorrhizal fungi on mixed root samples in Gutianshan CSP20 AGTGCTCAC ectomycorrhizal fungi on mixed root samples in Gutianshan CSP21 ATATCGCGC ectomycorrhizal fungi on mixed root samples in Gutianshan CSP22 ATCGTACGC ectomycorrhizal fungi on mixed root samples in Gutianshan CSP23 ATGCTACGC ectomycorrhizal fungi on mixed root samples in Gutianshan CSP24 CACACTGAC ectomycorrhizal fungi on mixed root samples in Gutianshan CSP25 CACAGTGTC ectomycorrhizal fungi on mixed root samples in Gutianshan CSP26 CACTAGTGC ectomycorrhizal fungi on mixed root samples in Gutianshan CSP27 CACTCTGTC ectomycorrhizal fungi on mixed root samples in Gutianshan

characteristic: description

text: uncultured fungus

text: Root EMF in Gutianshan


Dilution Series

text: Technion

text: live

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: 19 samples from four different dilutions of C. elegans reference RNA analyzed with CEL-Seq. 5 samples at 5 pg, 6 samples at 10 pg, 5 samples at 20 pg, 3 samples at 40 pg. Each sample contains a set of 92 ERCC spike-ins. This dilution series was used primarily to establish the exact sensitivity and reproducibility of CEL-Seq for different amounts of starting material.

text: Caenorhabditis elegans

text: Dilution Series of C. elegans Reference RNA


C. elegans reference

text: Technion

text: live

text: Generic

text: This is sample containing 1 ng of C. elegans RNA from mixed embryonic stages, analyzed with CEL-Seq, and used as reference in the dilution experiment.

text: Caenorhabditis elegans

text: C. elegans reference RNA from mixed embryonic stages


Hepatocellular carcinoma (HCC) samples

text: Beijing Institute of Genomics, CAS

text: live

text: Generic

text: Homo sapiens

text: Hepatocellular carcinoma (HCC) samples


text: Beijing Genome Institute

text: live

text: Generic

text: Brassica oleracea

text: Sample from Brassica oleracea


Pseudomonas fluorescens BS2

text: LSHTM

text: live

text: Generic

text: Pseudomonas fluorescens

text: Pseudomonas fluorescens BS2


text: Tsinghua University

text: live

text: Generic

text: Cellvibrio

text: Water example


text: Lippman, Cold Spring Harbor Laboratory

text: live

text: Generic

text: late vegetative meristem

characteristic: developmental stage

text: mutant TERMINARING FLOWER

characteristic: genotype

text: Solanum lycopersicum

text: meristem

text: mutant meristem replicate 1


text: Lippman, Cold Spring Harbor Laboratory

text: live

text: Generic

text: late vegetative meristem

text: mutant TERMINARING FLOWER

text: Solanum lycopersicum

text: meristem

text: mutant meristem replicate 2


text: Lippman, Cold Spring Harbor Laboratory

text: live

text: Generic

text: late vegetative meristem

text: wild type

text: Solanum lycopersicum

text: meristem

text: wild type meristem replicate 1


text: Lippman, Cold Spring Harbor Laboratory

text: live

text: Generic

text: late vegetative meristem

text: wild type

text: Solanum lycopersicum

text: meristem

text: wild type meristem replicate 2