characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Mouse monoclonal IgG, N-terminal epitope corresponding to residues 37-51 of PML of human origin. Antibody Target: PML

text: The protein encoded by this gene is a member of the tripartite motif (TRIM) family. The TRIM motif includes three zinc-binding domains, a RING, a B-box type 1 and a B-box type 2, and a coiled-coil region. This phosphoprotein localizes to nuclear bodies where it functions as a transcription factor and tumor suppressor. Its expression is cell-cycle related and it regulates the p53 response to oncogenic signals. The gene is often involved in the translocation with the retinoic acid receptor alpha gene associated with acute promyelocytic leukemia (APL). Extensive alternative splicing of this gene results in several variations of the protein's central and C-terminal regions; all variants encode the same N-terminus. Alternatively spliced transcript variants encoding different isoforms have been identified. (provided by RefSeq)

text: Santa Cruz Biotechnology

text: ATCC

text: F

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

characteristic: protocol

text: MACS

text: HudsonAlpha_ChipSeq_K562_PML_(SC-71910)_v042211.1


status: PUBLIC

text: ENCODE DCC

text: live

characteristic: INSDC status

text: Generic

tag: attribute

characteristic: antibody

text: Goat polyclonal IgG, epitope mapping at the N-terminus of FOXA2 of human origin. Antibody Target: FOXA2

characteristic: antibody antibodydescription

text: The intronless gene for this transcription coactivator is located between the protocadherin beta and gamma gene clusters on chromosome 5. The protein encoded by this gene is a component of the TFIID protein complex, a complex which binds to the TATA box in class II promoters and recruits RNA polymerase II and other factors. This particular subunit interacts with the largest TFIID subunit, as well as multiple transcription activators. The protein is required for transcription by promoters targeted by RNA polymerase II. (provided by RefSeq)

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

text: M

characteristic: cell sex

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: organism

text: 2x10^7 cells, fragmentation by probe-in sonicator, one 15-cycle round of PCR (Myers)

characteristic: protocol description

characteristic: replicate

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_A549_FOXA2_(SC-6554)_EtOH_0.02pct_v041610.2

characteristic: title

characteristic: treatment

text: 1 h with 0.02% Ethanol (Myers)

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Mouse monoclonal IgG, raised against recombinant HNF-3a of human origin. Antibody Target: FOXA1

text: This gene encodes a member of the forkhead class of DNA-binding proteins. These hepatocyte nuclear factors are transcriptional activators for liver-specific transcripts such as albumin and transthyretin, and they also interact with chromatin. Similar family members in mice have roles in the regulation of metabolism and in the differentiation of the pancreas and liver. (provided by RefSeq)

text: Santa Cruz Biotechnology

text: ATCC

text: endoderm

characteristic: cell lineage

text: M

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

characteristic: protocol

text: HudsonAlpha_ChipSeq_A549_FOXA1_(SC-101058)_EtOH_0.02pct_v041610.2

text: 1 h with 0.02% Ethanol (Myers)


text: ENCODE DCC

text: live

text: Generic

characteristic: antibody

text: Rabbit polyclonal IgG, epitope mapping at the C-terminus of FOXM1 of human origin. Antibody Target: FOXM1

characteristic: antibody antibodydescription

text: The protein encoded by this gene is a transcriptional activator involved in cell proliferation. The encoded protein is phosphorylated in M phase and regulates the expression of several cell cycle genes, such as cyclin B1 and cyclin D1. Several transcript variants encoding different isoforms have been found for this gene. (provided by RefSeq, Jul 2011)

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM12878

characteristic: biomaterial provider

text: F

characteristic: cell sex

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: organism

text: Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)

characteristic: protocol description

characteristic: replicate

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_GM12878_FOXM1_(SC-502)_v042211.1

text: No special treatment or protocol applies


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Mouse monoclonal IgG1; raised against amino acids 254-327 mapping within the DNA binding and dimerization domain of human CREB-1. Antibody Target: CREB1

text: This gene encodes a transcription factor that is a member of the leucine zipper family of DNA binding proteins. This protein binds as a homodimer to the cAMP-responsive element, an octameric palindrome. The protein is phosphorylated by several protein kinases, and induces transcription of genes in response to hormonal stimulation of the cAMP pathway. Alternate splicing of this gene results in two transcript variants encoding different isoforms. (provided by RefSeq)

text: Santa Cruz Biotechnology

text: ATCC

text: endoderm

characteristic: cell lineage

text: M

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

text: HudsonAlpha_ChipSeq_A549_CREB1_(SC-240)_EtOH_0.02pct_v041610.2

characteristic: title

characteristic: treatment

text: 1 h with 0.02% Ethanol (Myers)

characteristic: treatment description


text: ENCODE DCC

text: live

text: Generic

characteristic: antibody

text: Mouse monoclonal IgG raised against human recombinant GATA-3. Antibody Target: GATA3

characteristic: antibody antibodydescription

text: This gene encodes a protein which belongs to the GATA family of transcription factors. The protein contains two GATA-type zinc fingers and is a n important regulator of T-cell development and plays an important role in endothelial cell biology. Defects in this gene are the cause of hypoparathyroidism with sensorineural deafness and renal dysplasia (provided by RefSeq).

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

text: M

characteristic: cell sex

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

characteristic: organism

characteristic: protocol

text: MACS

text: HudsonAlpha_ChipSeq_A549_GATA3_(SC-268)_v042211.1


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Max

text: Rabbit polyclonal IgG, epitope mapping at the C-terminus of Max of human origin. Antibody Target: Max

text: The protein encoded by this gene is a member of the basic helix-loop-helix leucine zipper (bHLHZ) family of transcription factors. It is able to form homodimers and heterodimers with other family members, which include Mad, Mxi1 and Myc. Myc is an oncoprotein implicated in cell proliferation, differentiation and apoptosis. The homodimers and heterodimers compete for a common DNA target site (the E box) and rearrangement among these dimer forms provides a complex system of transcriptional regulation. Multiple alternatively spliced transcript variants have been described for this gene but the full-length nature for some of them is unknown (RefSeq).

text: Santa Cruz Biotechnology

text: ATCC

text: M

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: protocol description

characteristic: replicate

text: MACS

characteristic: softwareversion


text: ENCODE DCC

text: live

text: Generic

characteristic: antibody

text: Mouse monoclonal IgG, raised against a recombinant protein corresponding to a region near the N-terminus of MTA3 of human origin. Antibody Target: MTA3

characteristic: antibody antibodydescription

text: Plays a role in maintenance of the normal epithelial architecture through the repression of SNAI1 transcription in a histone deacetylase-dependent manner, and thus the regulation of E-cadherin levels.

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

characteristic: biomaterial provider

text: F

characteristic: cell sex

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

text: Homo sapiens

text: MACS

text: HudsonAlpha_ChipSeq_GM12878_MTA3_(SC-81325)_v042211.1

characteristic: title

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Rabbit polyclonal, EGR-1 (588). Antibody Target: EGR1

text: Egr-1, Egr-2, Egr-3 and Egr-4 are nuclear transcription factors belonging to the Egr C2H2-type zinc-finger protein family and containing three C2H2-type zinc fingers. As immediate early proteins, Egr transcription factors are rapidly induced by diverse extracellular stimuli. Egr proteins are subject to tight differential control through diverse mechanisms at several levels of regulation including transcriptional, translational and post-translational (including glyco- sylation, phosphorylation and redox) mechanisms and protein-protein inter- action. Egr-1 binds to the DNA sequence 5'-CGCCCCCGC-3' (EGR-site), there- by activating transcription of target genes whose products are required for mitogenisis and differentiation. Egr-2 binds specific DNA sites located in the promoter region of HoxA4. Egr-2 defects cause congenital hypomyelination neuropathy (also designated Charcot-Marie-tooth disease) and Dejerine- Sottas neuropathology (also designated hereditary motor and sensory neuro- pathy III. Egr-3 is involved in muscle spindle development and is expressed in T cells 20 minutes following activation. EGR-4 binds to the EGR consensus motif GCGTGGGCG, functions as a transcriptional repressor, and displays autoregulatory activities, downregulating its on gene promoter in a dose dependent manner.

text: Santa Cruz Biotechnology

text: F

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

characteristic: organism

characteristic: protocol

text: a 25-cycle round of PCR and an additional 15-cycle round of PCR after gel size selection (Myers)

text: MACS


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Mouse monoclonal IgG, raised against recombinant CBX3 of human origin. Antibody Target: CBX3

characteristic: antibody antibodydescription

text: At the nuclear envelope, the nuclear lamina and heterochromatin are adjacent to the inner nuclear membrane. The protein encoded by this gene binds DNA and is a component of heterochromatin. This protein also can bind lamin B receptor, an integral membrane protein found in the inner nuclear membrane. The dual binding functions of the encoded protein may explain the association of heterochromatin with the inner nuclear membrane. This protein binds histone H3 tails methylated at Lys-9 sites. This protein is also recruited to sites of ultraviolet-induced DNA damage and double-strand breaks. Two transcript variants encoding the same protein but differing in the 5' UTR, have been found for this gene.

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

text: F

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

text: Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)

characteristic: protocol description

characteristic: replicate

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_K562_CBX3_(SC-101004)_v042211.1


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Mouse monoclonal (p250). Antibody Target: TAF1

text: TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa. Also designated TAF250.

text: Santa Cruz Biotechnology

text: ATCC

text: F

characteristic: cell sex

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

text: Homo sapiens

text: MACS

text: HudsonAlpha_ChipSeq_ECC-1_TAF1_v042211.1

characteristic: title

text: No special treatment or protocol applies

characteristic: treatment description


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Goat polyclonal IgG, epitope mapping at the N-terminus of CTCF of human origin. Antibody Target: CTCF

characteristic: antibody antibodydescription

text: This gene is a member of the BORIS + CTCF gene family and encodes a transcriptional regulator protein with 11 highly conserved zinc finger (ZF) domains. This nuclear protein is able to use different combinations of the ZF domains to bind different DNA target sequences and proteins. (provided by RefSeq)

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

text: ATCC

text: F

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

characteristic: organism

characteristic: protocol

text: MACS

text: HudsonAlpha_ChipSeq_MCF-7_CTCF_(SC-5916)_v042211.1


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: NRSF

text: Mouse monoclonal. Antibody Target: NRSF

text: Neuron-restrictive silencer transcription factor

text: (Made by Protein Expression Center: pec@caltech.edu)

text: Dr. David Anderson at Caltech

characteristic: antibody vendorname

text: David Anderson, Caltech

text: ATCC

characteristic: biomaterial provider

text: F

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

text: 2x10^7 cells, fragmentation by bioruptor, one 15-cycle round of PCR (Myers)

characteristic: protocol description

characteristic: replicate

text: MACS

characteristic: softwareversion

text: SK-N-SH

text: HudsonAlpha_ChipSeq_SK-N-SH_NRSF_v041610.1


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: RevXlinkChromatin

characteristic: antibody

text: Lonza

text: HUVEC

characteristic: cell

text: umbilical vein endothelial cells

characteristic: cell description

text: normal

characteristic: cell karyotype

text: mesoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: U

characteristic: cell sex

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

text: Homo sapiens

text: one 15-cycle round of PCR (Myers)

text: HUVEC

text: HudsonAlpha_ChipSeq_HUVEC_RevXlinkChromatin_PCR1x

characteristic: title

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Mouse monoclonal to RNA polymerase II CTD repeat YSPTSPS antibody (4H8) - ChIP Grade. Antibody Target: POL2

characteristic: antibody antibodydescription

text: This gene encodes the largest subunit of RNA polymerase II, the polymerase responsible for synthesizing messenger RNA in eukaryotes

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: abcam

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

text: F

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

characteristic: organism

characteristic: protocol

characteristic: protocol description

text: MACS

text: HudsonAlpha_ChipSeq_HL-60_Pol2-4H8_v042211.1


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Mouse monoclonal IgG raised against human recombinant GATA-3. Antibody Target: GATA3

text: This gene encodes a protein which belongs to the GATA family of transcription factors. The protein contains two GATA-type zinc fingers and is a n important regulator of T-cell development and plays an important role in endothelial cell biology. Defects in this gene are the cause of hypoparathyroidism with sensorineural deafness and renal dysplasia (provided by RefSeq).

text: Santa Cruz Biotechnology

text: ATCC

text: F

characteristic: cell sex

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

text: Homo sapiens

text: Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)

characteristic: replicate

text: MACS

characteristic: softwareversion

text: SK-N-SH

text: HudsonAlpha_ChipSeq_SK-N-SH_GATA3_(SC-268)_v042211.1

characteristic: title

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: GABP

text: Mouse monoclonal, GABPa(G-1), IgG1. Antibody Target: GABP

characteristic: antibody antibodydescription

text: The transcription factor GA-binding protein (GABP) is composed of two subunits, alpha and beta. Alpha binds to a specific DNA sequence.

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

text: F

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

text: MACS

text: SK-N-SH

text: HudsonAlpha_ChipSeq_SK-N-SH_GABP_v042211.1


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Mouse monoclonal IgG, specific for an epitope mapping between a.a. 515-555 within an internal region of MBD4 of mouse origin. Antibody Target: MBD4

text: MBD4 may function to mediate the biological consequences of the methylation signal. In addition, MBD4 has protein sequence similarity to bacterial DNA repair enzymes and thus may have some function in DNA repair. Further, MBD4 gene mutations are detected in tumors with primary microsatellite-instability (MSI), a form of genomic instability associated with defective DNA mismatch repair, and MBD4 gene meets 4 of 5 criteria of a bona fide MIS target gene. (provided by RefSeq)

text: Santa Cruz Biotechnology

text: ATCC

text: M

characteristic: cell sex

characteristic: controlid

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

characteristic: organism

characteristic: protocol

characteristic: protocol description

text: MACS

text: HudsonAlpha_ChipSeq_HepG2_MBD4_(SC-271530)_v042211.1

text: No special treatment or protocol applies


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Mouse monoclonal IgG, raised against a recombinant protein corresponding to an internal region of NF-1 of human origin. Antibody Target: NFIC

text: Recognizes and binds the palindromic sequence 5'-TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication.

text: Santa Cruz Biotechnology

text: ATCC

text: M

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: replicate

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_HepG2_NFIC_(SC-81335)_v042211.1

characteristic: title

characteristic: treatment description


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Mouse monoclonal IgG, raised against a recombinant protein corresponding to an internal region of ATF2 of human origin. Antibody Target: ATF2

characteristic: antibody antibodydescription

text: This gene encodes a transcription factor that is a member of the leucine zipper family of DNA binding proteins. This protein binds to the cAMP-responsive element (CRE), an octameric palindrome. The protein forms a homodimer or heterodimer with c-Jun and stimulates CRE-dependent transcription. The protein is also a histone acetyltransferase (HAT) that specifically acetylates histones H2B and H4 in vitro; thus it may represent a class of sequence-specific factors that activate transcription by direct effects on chromatin components. Additional transcript variants have been identified but their biological validity has not been determined. (provided by RefSeq)

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: WiCell Research Institute

characteristic: biomaterial provider

text: M

characteristic: cell sex

characteristic: controlid

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

text: MACS

text: HudsonAlpha_ChipSeq_H1-hESC_ATF2_(SC-81188)_v042211.1


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Rabbit polyclonal IgG, epitope mapping at the C-terminus of Sp4 of human origin. Antibody Target: SP4

text: Binds to GT and GC boxes promoters elements. Probable transcriptional activator.

text: Santa Cruz Biotechnology

text: WiCell Research Institute

text: M

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

characteristic: organism

characteristic: protocol

characteristic: protocol description

text: MACS

text: HudsonAlpha_ChipSeq_H1-hESC_SP4_(V-20)_v042211.1


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: NRSF

characteristic: antibody

text: Mouse monoclonal. Antibody Target: NRSF

characteristic: antibody antibodydescription

text: Neuron-restrictive silencer transcription factor

characteristic: antibody targetdescription

text: (Made by Protein Expression Center: pec@caltech.edu)

text: Dr. David Anderson at Caltech

text: David Anderson, Caltech

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM12878

text: F

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

text: Homo sapiens

text: one 15-cycle round of PCR (Myers)

characteristic: replicate

text: MACS

characteristic: softwareversion

characteristic: title

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: E2A.E12(V-18) is an affinity purified rabbit polyclonal antibody raised against a peptide mapping at the C-terminus of E2A.E12 of human origin. Recommended for detection of E12 and E47 of m, r and h origin by WB, IP, IF, IHC(P), ELISA and indirect FCM using PE (sc-3739)- or FITC (sc-2012)-conjugated goat anti-rabbit IgG. Antibody Target: TCF3

text: Heterodimers between TCF3 and tissue-specific basic helix-loop-helix (bHLH) proteins play major roles in determining tissue-specific cell fate during embryogenesis, like muscle or early B-cell differentiation. Dimers bind DNA on E-box motifs: 5'-CANNTG-3'. Binds to the kappa-E2 site in the kappa immunoglobulin gene enhancer.

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

characteristic: biomaterial provider

text: F

characteristic: cell sex

characteristic: controlid

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

text: one 15-cycle round of PCR (Myers)

text: MACS

text: HudsonAlpha_ChipSeq_GM12878_TCF3_(SC-349)_PCR1x


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: HEB (A-20) Rabbit polyclonal IgG, 200 ?g/ml. Epitope mapping within the C-terminus of HEB of human origin. Antibody Target: TCF12

characteristic: antibody antibodydescription

text: The protein encoded by this gene is a member of the basic helix-loop-helix (bHLH) E-protein family that recognizes the consensus binding site (E-box) CANNTG. This encoded protein is expressed in many tissues, among them skeletal muscle, thymus, B- and T-cells, and may participate in regulating lineage-specific gene expression through the formation of heterodimers with other bHLH E-proteins. Several alternatively spliced transcript variants of this gene have been described, but the full-length nature of some of these variants has not been determined.

characteristic: antibody targetdescription

text: Santa Cruz Biotechnology

text: ATCC

text: M

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

characteristic: organism

characteristic: protocol

text: Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)

characteristic: protocol description

text: MACS

text: HudsonAlpha_ChipSeq_A549_TCF12_EtOH_0.02pct_v042211.1

characteristic: treatment

text: 1 h with 0.02% Ethanol (Myers)


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Rabbit affinity purified polyclonal antibody. Epitope is the C-terminus of human estrogen receptor alpha (ESR1). Recommended for detection of estrogen receptor of m, r and h origin by WB, IP, IF, IHC(P) and ELISA. Antibody Target: ESR1

text: This gene encodes an estrogen receptor, a ligand-activated transcription factor composed of several domains important for hormone binding, DNA binding, and activation of transcription. The protein localizes to the nucleus where it may form a homodimer or a heterodimer with estrogen receptor 2. Estrogen and its receptors are essential for sexual development and reproductive function, but also play a role in other tissues such as bone. Estrogen receptors are also involved in pathological processes including breast cancer, endometrial cancer, and osteoporosis. Alternative splicing results in several transcript variants, which differ in their 5-prime UTRs and use different promoters. (provided by RefSeq)

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

text: ATCC

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

text: Homo sapiens

text: 2x10^7 cells, fragmentation by probe-in sonicator, one 15-cycle round of PCR (Myers)

characteristic: replicate

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_ECC-1_ERalpha_a_BPA_100nM_v041610.2

characteristic: title

text: 1 h with 100 nM Bisphenol A (Myers)

characteristic: treatment description


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Fra-2(Q-20) is an affinity purified rabbit polyclonal raised against the N-terminus of Fra-2 of human origin. Recommended for detection of Fra-2 of m, r, h and chicken origin by WB, IP, IF, IHC(P) and ELISA. Antibody Target: FOSL2

characteristic: antibody antibodydescription

text: Rabbit polyclonal. Fra-2(Q-20) is an affinity purified raised against the N-terminus of Fra-2 of human origin. Recommended for detection of Fra-2 of m, r, h and chicken origin by WB, IP, IF, IHC(P) and ELISA. Antibody Target: FOSL2

text: The Fos gene family consists of 4 members: FOS, FOSB, FOSL1, and FOSL2. These genes encode leucine zipper proteins that can dimerize with proteins of the JUN family, thereby forming the transcription factor complex AP-1. As such, the FOS proteins have been implicated as regulators of cell proliferation, differentiation, and transformation.

characteristic: antibody targetdescription

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

text: M

characteristic: cell sex

characteristic: controlid

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

text: MACS

text: HudsonAlpha_ChipSeq_A549_FOSL2_EtOH_0.02pct_v042211.1

text: 1 h with 0.02% Ethanol (Myers)


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: NRSF

text: Mouse monoclonal. Antibody Target: NRSF

text: Neuron-restrictive silencer transcription factor

text: (Made by Protein Expression Center: pec@caltech.edu)

characteristic: antibody vendorid

text: Dr. David Anderson at Caltech

text: David Anderson, Caltech

text: ATCC

text: M

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: organism

characteristic: protocol

characteristic: protocol description

text: MACS

text: HudsonAlpha_ChipSeq_A549_NRSF_EtOH_0.02pct_v042211.1

characteristic: treatment

text: 1 h with 0.02% Ethanol (Myers)


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Rabbit polyclonal IgG, epitope mapping at the C-terminus of FOXM1 of human origin. Antibody Target: FOXM1

characteristic: antibody antibodydescription

text: The protein encoded by this gene is a transcriptional activator involved in cell proliferation. The encoded protein is phosphorylated in M phase and regulates the expression of several cell cycle genes, such as cyclin B1 and cyclin D1. Several transcript variants encoding different isoforms have been found for this gene. (provided by RefSeq, Jul 2011)

characteristic: antibody targetdescription

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

text: F

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: replicate

text: MACS

characteristic: softwareversion

text: SK-N-SH

text: HudsonAlpha_ChipSeq_SK-N-SH_FOXM1_(SC-502)_v042211.1

characteristic: title

text: No special treatment or protocol applies

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Rabbit polyclonal IgG, epitope mapping at the C-terminus of Elf-1 of human origin. Antibody Target: ELF1

text: This gene encodes an E26 transformation-specific related transcription factor. The encoded protein is primarily expressed in lymphoid cells and acts as both an enhancer and a repressor to regulate transcription of various genes. Alternative splicing results in multiple transcript variants. (provided by RefSeq)

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

text: ATCC

text: F

characteristic: cell sex

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

text: Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)

text: MACS

text: SK-N-SH

text: HudsonAlpha_ChipSeq_SK-N-SH_ELF1_(SC-631)_v042211.1


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Goat polyclonal IgG, epitope mapping at the C-terminus of LRF of human origin. Antibody Target: ZBTB7A

characteristic: antibody antibodydescription

text: Plays a key role in the instruction of early lymphoid progenitors to develop into B lineage by repressing T-cell instructive Notch signals (By similarity).

characteristic: antibody targetdescription

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

text: F

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: organism

characteristic: protocol

characteristic: protocol description

text: MACS

text: HudsonAlpha_ChipSeq_ECC-1_ZBTB7A_(SC-34508)_v042211.1


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Rabbit polyclonal IgG, epitope mapping at the C-terminus of YY1 of human origin. Antibody Target: YY1

text: YY1 is a ubiquitously distributed transcription factor belonging to the GLI-Kruppel class of zinc finger proteins. The protein is involved in repressing and activating a diverse number of promoters. YY1 may direct histone deacetylases and histone acetyltransferases to a promoter in order to activate or repress the promoter, thus implicating histone modification in the function of YY1

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

text: ATCC

text: F

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: replicate

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_ECC-1_YY1_(SC-281)_v042211.1

characteristic: title

characteristic: treatment description


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: NRSF

characteristic: antibody

text: Mouse monoclonal. Antibody Target: NRSF

characteristic: antibody antibodydescription

text: Neuron-restrictive silencer transcription factor

characteristic: antibody targetdescription

text: Dr. David Anderson at Caltech

text: David Anderson, Caltech

text: ATCC

text: F

characteristic: cell sex

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

text: MACS

text: HudsonAlpha_ChipSeq_HL-60_NRSF_v042211.1


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Rabbit Polyclonal IgG. Antibody Target: PBX3

text: Pbx 3 (D-17)

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

text: M

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: organism

characteristic: protocol

characteristic: protocol description

text: MACS


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Rabbit polyclonal IgG, epitope mapping at the N-terminus of FOSL1 of human origin. Antibody Target: FOSL1

characteristic: antibody antibodydescription

text: The Fos gene family consists of 4 members: FOS, FOSB, FOSL1, and FOSL2. These genes encode leucine zipper proteins that can dimerize with proteins of the JUN family, thereby forming the transcription factor complex AP-1. As such, the FOS proteins have been implicated as regulators of cell proliferation, differentiation, and transformation. (provided by RefSeq)

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

text: ATCC

text: M

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: replicate

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_HCT-116_FOSL1_(SC-183)_v042211.1

characteristic: title

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Rabbit polyclonal IgG, epitope mapping at the C-terminus of ATF3 of human origin. Antibody Target: ATF3

text: Activating transcription factor 3. A bZIP transcription factor and member of the Ca2+/cAMP response element-binding (CREB) protein family. ATF3 is found to act both as an activator and repressor of transcription.

text: Santa Cruz Biotechnology

text: ATCC

text: M

characteristic: cell sex

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

text: MACS

text: HudsonAlpha_ChipSeq_HCT-116_ATF3_v042211.1

text: No special treatment or protocol applies


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Mouse monoclonal IgG, raised against recombinant CBX3 of human origin. Antibody Target: CBX3

characteristic: antibody antibodydescription

text: At the nuclear envelope, the nuclear lamina and heterochromatin are adjacent to the inner nuclear membrane. The protein encoded by this gene binds DNA and is a component of heterochromatin. This protein also can bind lamin B receptor, an integral membrane protein found in the inner nuclear membrane. The dual binding functions of the encoded protein may explain the association of heterochromatin with the inner nuclear membrane. This protein binds histone H3 tails methylated at Lys-9 sites. This protein is also recruited to sites of ultraviolet-induced DNA damage and double-strand breaks. Two transcript variants encoding the same protein but differing in the 5' UTR, have been found for this gene.

characteristic: antibody targetdescription

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

text: M

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: organism

characteristic: protocol

text: Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)

characteristic: protocol description

text: MACS

text: HudsonAlpha_ChipSeq_HCT-116_CBX3_(SC-101004)_v042211.1


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Rabbit Polyclonal. Antibody Target: P300

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

text: ATCC

text: F

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: replicate

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_ECC-1_p300_v042211.1

characteristic: title

characteristic: treatment description


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Mouse monoclonal IgG1; raised against amino acids 254-327 mapping within the DNA binding and dimerization domain of human CREB-1. Antibody Target: CREB1

characteristic: antibody antibodydescription

text: This gene encodes a transcription factor that is a member of the leucine zipper family of DNA binding proteins. This protein binds as a homodimer to the cAMP-responsive element, an octameric palindrome. The protein is phosphorylated by several protein kinases, and induces transcription of genes in response to hormonal stimulation of the cAMP pathway. Alternate splicing of this gene results in two transcript variants encoding different isoforms. (provided by RefSeq)

characteristic: antibody targetdescription

text: Santa Cruz Biotechnology

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM12878

text: F

characteristic: cell sex

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

text: MACS

text: HudsonAlpha_ChipSeq_GM12878_CREB1_(SC-240)_v042211.1


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Rabbit polyclonal. Antibody Target: RAD21

text: Synthetic peptide (Human) conjugated to KLH - which represents a portion of human Rad21 encoded within exon 14

text: abcam

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

text: M

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: organism

characteristic: protocol

characteristic: protocol description

text: MACS

text: HudsonAlpha_ChipSeq_A549_Rad21_v042211.1


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: SRF

characteristic: antibody

text: Rabbit polyclonal. Antibody Target: SRF

characteristic: antibody antibodydescription

text: Serum response transcription factor

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

text: ATCC

text: F

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: replicate

text: MACS

characteristic: softwareversion

characteristic: title

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Santa Cruz Biotechnology

text: ATCC

text: F

characteristic: cell sex

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

text: MACS

text: SK-N-SH

text: HudsonAlpha_ChipSeq_SK-N-SH_p300_v042211.1


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Rabbit polyclonal IgG, epitope mapping at the C-terminus of Elf-1 of human origin. Antibody Target: ELF1

characteristic: antibody antibodydescription

text: This gene encodes an E26 transformation-specific related transcription factor. The encoded protein is primarily expressed in lymphoid cells and acts as both an enhancer and a repressor to regulate transcription of various genes. Alternative splicing results in multiple transcript variants. (provided by RefSeq)

characteristic: antibody targetdescription

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

text: F

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: organism

characteristic: protocol

characteristic: protocol description

text: MACS

text: HudsonAlpha_ChipSeq_MCF-7_ELF1_(SC-631)_v042211.1


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

text: ATCC

text: M

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: replicate

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_HCT-116_ELF1_(SC-631)_v042211.1

characteristic: title

text: No special treatment or protocol applies

characteristic: treatment description


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Rabbit polyclonal IgG, epitope corresponding to a.a. 232-281 mapping at the C-terminus of E2F-6 of human origin. Antibody Target: E2F6

characteristic: antibody antibodydescription

text: This gene encodes a member of the E2F transcription factor protein family. E2F family members play a crucial role in control of the cell cycle and of the action of tumor suppressor proteins. They are also a target of the transforming proteins of small DNA tumor viruses. Many E2F proteins contain several evolutionarily conserved domains: a DNA binding domain, a dimerization domain which determines interaction with the differentiation regulated transcription factor proteins (DP), a transactivation domain enriched in acidic amino acids, and a tumor suppressor protein association domain which is embedded within the transactivation domain. The encoded protein of this gene is atypical because it lacks the transactivation and tumor suppressor protein association domains. It contains a modular suppression domain and is an inhibitor of E2F-dependent transcription. The protein is part of a multimeric protein complex that contains a histone methyltransferase and the transcription factors Mga and Max. Multiple transcript variants have been reported for this gene, but it has not been clearly demonstrated that they encode valid isoforms (RefSeq).

characteristic: antibody targetdescription

text: Santa Cruz Biotechnology

text: ATCC

text: M

characteristic: cell sex

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

text: Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)

text: MACS


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: RXRA

text: RXRa(D-20) is an affinity purified rabbit polyclonal antibody raised against a peptide mapping at the N-terminus of RXRalpha of human origin. Recommended for detection of RXRalpha of m, r and h origin by WB, IP, IF, IHC(P) and ELISA. Antibody Target: RXRA

text: Retinoid X receptors (RXRs) and retinoic acid receptors (RARs), are nuclear receptors that mediate the biological effects of retinoids by their involvement in retinoic acid-mediated gene activation. These receptors exert their action by binding, as homodimers or heterodimers, to specific sequences in the promoters of target genes and regulating their transcription. The protein encoded by this gene is a member of the steroid and thyroid hormone receptor superfamily of transcriptional regulators.

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

text: F

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: organism

characteristic: protocol

characteristic: protocol description

text: MACS

text: SK-N-SH

text: HudsonAlpha_ChipSeq_SK-N-SH_RXRA_v042211.1


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Fra-2(Q-20) is an affinity purified rabbit polyclonal raised against the N-terminus of Fra-2 of human origin. Recommended for detection of Fra-2 of m, r, h and chicken origin by WB, IP, IF, IHC(P) and ELISA. Antibody Target: FOSL2

characteristic: antibody antibodydescription

text: Rabbit polyclonal. Fra-2(Q-20) is an affinity purified raised against the N-terminus of Fra-2 of human origin. Recommended for detection of Fra-2 of m, r, h and chicken origin by WB, IP, IF, IHC(P) and ELISA. Antibody Target: FOSL2

text: The Fos gene family consists of 4 members: FOS, FOSB, FOSL1, and FOSL2. These genes encode leucine zipper proteins that can dimerize with proteins of the JUN family, thereby forming the transcription factor complex AP-1. As such, the FOS proteins have been implicated as regulators of cell proliferation, differentiation, and transformation.

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

text: ATCC

text: F

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: replicate

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_MCF-7_FOSL2_v042211.1

characteristic: title

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Rabbit polyclonal IgG, epitope mapping at the C-terminus of FOXM1 of human origin. Antibody Target: FOXM1

text: The protein encoded by this gene is a transcriptional activator involved in cell proliferation. The encoded protein is phosphorylated in M phase and regulates the expression of several cell cycle genes, such as cyclin B1 and cyclin D1. Several transcript variants encoding different isoforms have been found for this gene. (provided by RefSeq, Jul 2011)

text: Santa Cruz Biotechnology

text: ATCC

text: F

characteristic: cell sex

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

text: MACS

text: HudsonAlpha_ChipSeq_MCF-7_FOXM1_(SC-502)_v042211.1


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Mouse monoclonal (p250). Antibody Target: TAF1

characteristic: antibody antibodydescription

text: TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa. Also designated TAF250.

characteristic: antibody targetdescription

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

text: M

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: organism

characteristic: protocol

text: 2x10^7 cells, fragmentation by bioruptor, one 15-cycle round of PCR (Myers)

characteristic: protocol description

text: MACS

text: HudsonAlpha_ChipSeq_PFSK-1_TAF1_v041610.1


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Mouse monoclonal IgG, N-terminal epitope corresponding to residues 37-51 of PML of human origin. Antibody Target: PML

text: The protein encoded by this gene is a member of the tripartite motif (TRIM) family. The TRIM motif includes three zinc-binding domains, a RING, a B-box type 1 and a B-box type 2, and a coiled-coil region. This phosphoprotein localizes to nuclear bodies where it functions as a transcription factor and tumor suppressor. Its expression is cell-cycle related and it regulates the p53 response to oncogenic signals. The gene is often involved in the translocation with the retinoic acid receptor alpha gene associated with acute promyelocytic leukemia (APL). Extensive alternative splicing of this gene results in several variations of the protein's central and C-terminal regions; all variants encode the same N-terminus. Alternatively spliced transcript variants encoding different isoforms have been identified. (provided by RefSeq)

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM12878

text: F

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: replicate

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_GM12878_PML_(SC-71910)_v042211.1

characteristic: title

text: No special treatment or protocol applies

characteristic: treatment description


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Mouse monoclonal IgG, raised against recombinant protein TEF-3 (TEAD4) of human origin. Antibody Target: TEAD4

characteristic: antibody antibodydescription

text: Member of the transcriptional enhancer factor (TEF) family of transcription factors, which contain the TEA/ATTS DNA-binding domain. It is preferentially expressed in the skeletal muscle, and binds to the M-CAT regulatory element found in promoters of muscle-specific genes to direct their gene expression.

characteristic: antibody targetdescription

text: Santa Cruz Biotechnology

text: ATCC

text: M

characteristic: cell sex

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

text: Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)

text: MACS

text: HudsonAlpha_ChipSeq_HCT-116_TEAD4_(SC-101184)_v042211.1


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

text: F

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: organism

characteristic: protocol

characteristic: protocol description

text: MACS

text: SK-N-SH

text: HudsonAlpha_ChipSeq_SK-N-SH_TAF1_v041610.1


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Goat polyclonal IgG, epitope mapping at the N-terminus of CTCF of human origin. Antibody Target: CTCF

characteristic: antibody antibodydescription

text: This gene is a member of the BORIS + CTCF gene family and encodes a transcriptional regulator protein with 11 highly conserved zinc finger (ZF) domains. This nuclear protein is able to use different combinations of the ZF domains to bind different DNA target sequences and proteins. (provided by RefSeq)

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

text: ATCC

text: F

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

text: 2x10^7 cells, fragmentation by probe-in sonicator, one 15-cycle round of PCR (Myers)

characteristic: replicate

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_ECC-1_CTCF_(SC-5916)_DMSO_0.02pct_v041610.2

characteristic: title

characteristic: treatment

text: 1 h with 0.02% Dimethyl sufloxide (DMSO) (Myers)

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Bcl-3(C-14) is an affinity purified rabbit polyclonal antibody raised against a peptide mapping at the C-terminus of Bcl-3 of human origin. Recommended for detection of Bcl-3 of m, r and h origin by WB, IP, IF and ELISA. Antibody Target: BCL3

text: Rabbit polyclonal. Bcl-3(C-14) is an affinity purified antibody raised against a peptide mapping at the C-terminus of Bcl-3 of human origin. Recommended for detection of Bcl-3 of mouse, rat and human origin by WB, IP, IF and ELISA. Antibody Target: BCL3

text: This gene is a proto-oncogene candidate. It is identified by its translocation into the immunoglobulin alpha-locus in some cases of B-cell leukemia. The protein encoded by this gene contains seven ankyrin repeats, which are most closely related to those found in I kappa B proteins. This protein functions as a transcriptional co-activator that activates through its association with NF-kappa B homodimers. The expression of this gene can be induced by NF-kappa B, which forms a part of the autoregulatory loop that controls the nuclear residence of p50 NF-kappa B. (Provided by RefSeq).

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

text: M

characteristic: cell sex

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

text: MACS

text: HudsonAlpha_ChipSeq_A549_BCL3_EtOH_0.02pct_v042211.1

text: 1 h with 0.02% Ethanol (Myers)


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Rabbit polyclonal IgG, epitope mapping near the N-terminus of SP2 of human origin. Antibody Target: SP2

characteristic: antibody antibodydescription

text: This gene encodes a member of the Sp subfamily of Sp/XKLF transcription factors. Sp family proteins are sequence-specific DNA-binding proteins characterized by an amino-terminal trans-activation domain and three carboxy-terminal zinc finger motifs. This protein contains the least conserved DNA-binding domain within the Sp subfamily of proteins, and its DNA sequence specificity differs from the other Sp proteins. It localizes primarily within subnuclear foci associated with the nuclear matrix, and can activate or in some cases repress expression from different promoters. (provided by RefSeq)

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

text: WiCell Research Institute

characteristic: biomaterial provider

text: M

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: organism

characteristic: protocol

characteristic: protocol description

characteristic: replicate

text: MACS

text: HudsonAlpha_ChipSeq_H1-hESC_SP2_(SC-643)_v042211.1


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Rabbit polyclonal IgG, epitope mapping at the C-terminus of CEBPD of human origin. Antibody Target: CEBPD

text: The protein encoded by this intronless gene is a bZIP transcription factor which can bind as a homodimer to certain DNA regulatory regions. It can also form heterodimers with the related protein CEBP-alpha. The encoded protein is important in the regulation of genes involved in immune and inflammatory responses, and may be involved in the regulation of genes associated with activation and/or differentiation of macrophages. The cytogenetic location of this locus has been reported as both 8p11 and 8q11 (provided by RefSeq).

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

text: M

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

text: 2x10^7 cells, fragmentation by bioruptor, one 15-cycle round of PCR (Myers)

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_HepG2_CEBPD_(SC-636)_v041610.1

characteristic: title

text: No special treatment or protocol applies

characteristic: treatment description


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Rabbit polyclonal IgG, epitope mapping at the C-terminus of CEBPB of rat origin. Antibody Target: CEBPB

characteristic: antibody antibodydescription

text: The protein encoded by this intronless gene is a bZIP transcription factor which can bind as a homodimer to certain DNA regulatory regions. It can also form heterodimers with the related proteins CEBP-alpha, CEBP-delta, and CEBP-gamma. The encoded protein is important in the regulation of genes involved in immune and inflammatory responses and has been shown to bind to the IL-1 response element in the IL-6 gene, as well as to regulatory regions of several acute-phase and cytokine genes. In addition, the encoded protein can bind the promoter and upstream element and stimulate the expression of the collagen type I gene (provided by RefSeq).

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

text: ATCC

text: M

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

text: MACS

text: HudsonAlpha_ChipSeq_HepG2_CEBPB_(SC-150)_v041610.1


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Mouse monoclonal IgG, raised against amino acids 1-110 of NFATc1 of human origin. Antibody Target: NFATC1

text: The product of this gene is a component of the nuclear factor of activated T cells DNA-binding transcription complex. This complex consists of at least two components: a preexisting cytosolic component that translocates to the nucleus upon T cell receptor (TCR) stimulation, and an inducible nuclear component. Proteins belonging to this family of transcription factors play a central role in inducible gene transcription during immune response. The product of this gene is an inducible nuclear component. It functions as a major molecular target for the immunosuppressive drugs such as cyclosporin A. Five transcript variants encoding distinct isoforms have been identified for this gene. Different isoforms of this protein may regulate inducible expression of different cytokine genes. (provided by RefSeq)

text: Santa Cruz Biotechnology

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM12878

characteristic: biomaterial provider

text: F

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: organism

characteristic: protocol

text: Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)

characteristic: protocol description

characteristic: replicate

text: MACS

text: HudsonAlpha_ChipSeq_GM12878_NFATC1_(SC-17834)_v042211.1


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Mouse monoclonal IgG, raised against a recombinant protein corresponding to an internal region of ATF2 of human origin. Antibody Target: ATF2

characteristic: antibody antibodydescription

text: This gene encodes a transcription factor that is a member of the leucine zipper family of DNA binding proteins. This protein binds to the cAMP-responsive element (CRE), an octameric palindrome. The protein forms a homodimer or heterodimer with c-Jun and stimulates CRE-dependent transcription. The protein is also a histone acetyltransferase (HAT) that specifically acetylates histones H2B and H4 in vitro; thus it may represent a class of sequence-specific factors that activate transcription by direct effects on chromatin components. Additional transcript variants have been identified but their biological validity has not been determined. (provided by RefSeq)

characteristic: antibody targetdescription

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: F

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_GM12878_ATF2_(SC-81188)_v042211.1

characteristic: title

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Rabbit polyclonal, Sin3A (k-20). Antibody Target: SIN3AK20

text: Co-repressor interacting with HDAC1, N-coR, SMRT, and MeCP2

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

text: ATCC

text: M

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

text: MACS

text: HudsonAlpha_ChipSeq_PFSK-1_Sin3Ak-20_v041610.1


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Mouse monoclonal IgG, specific for an epitope mapping between amino acids 13-44 at the N-terminus of NR2F2 of human origin. Antibody Target: NR2F2

characteristic: antibody antibodydescription

text: This gene encodes a member of the steroid thyroid hormone superfamily of nuclear receptors. The encoded protein is a ligand inducible transcription factor that is involved in the regulation of many different genes. Alternate splicing results in multiple transcript variants. (provided by RefSeq)

characteristic: antibody targetdescription

text: Santa Cruz Biotechnology

text: ATCC

characteristic: biomaterial provider

text: F

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: organism

characteristic: protocol

characteristic: protocol description

characteristic: replicate

text: MACS

text: HudsonAlpha_ChipSeq_K562_NR2F2_(SC-271940)_v042211.1


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Mouse monoclonal IgG raised against human recombinant GATA-3. Antibody Target: GATA3

text: This gene encodes a protein which belongs to the GATA family of transcription factors. The protein contains two GATA-type zinc fingers and is a n important regulator of T-cell development and plays an important role in endothelial cell biology. Defects in this gene are the cause of hypoparathyroidism with sensorineural deafness and renal dysplasia (provided by RefSeq).

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

text: F

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_MCF-7_GATA3_(SC-268)_v042211.1

characteristic: title

text: No special treatment or protocol applies

characteristic: treatment description


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: NRSF

characteristic: antibody

text: Mouse monoclonal. Antibody Target: NRSF

characteristic: antibody antibodydescription

text: Neuron-restrictive silencer transcription factor

characteristic: antibody targetdescription

text: (Made by Protein Expression Center: pec@caltech.edu)

characteristic: antibody vendorid

text: Dr. David Anderson at Caltech

text: David Anderson, Caltech

text: ATCC

text: M

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

text: 2x10^7 cells, fragmentation by bioruptor, one 15-cycle round of PCR (Myers)

text: MACS

text: HudsonAlpha_ChipSeq_HepG2_NRSF_v041610.1


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Santa Cruz Biotechnology

text: ATCC

characteristic: biomaterial provider

text: M

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: organism

characteristic: protocol

characteristic: protocol description

characteristic: replicate

text: MACS

text: HudsonAlpha_ChipSeq_PANC-1_Sin3Ak-20_v041610.1


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: NRSF

characteristic: antibody

text: Mouse monoclonal. Antibody Target: NRSF

characteristic: antibody antibodydescription

characteristic: antibody targetdescription

text: Dr. David Anderson at Caltech

characteristic: antibody vendorname

text: David Anderson, Caltech

text: ATCC

text: M

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_PFSK-1_NRSF_v041610.1

characteristic: title

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Rabbit polyclonal IgG, epitope mapping near the N-terminus of SP2 of human origin. Antibody Target: SP2

text: This gene encodes a member of the Sp subfamily of Sp/XKLF transcription factors. Sp family proteins are sequence-specific DNA-binding proteins characterized by an amino-terminal trans-activation domain and three carboxy-terminal zinc finger motifs. This protein contains the least conserved DNA-binding domain within the Sp subfamily of proteins, and its DNA sequence specificity differs from the other Sp proteins. It localizes primarily within subnuclear foci associated with the nuclear matrix, and can activate or in some cases repress expression from different promoters. (provided by RefSeq)

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

text: ATCC

text: M

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

text: Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)

text: MACS

text: HudsonAlpha_ChipSeq_HepG2_SP2_(SC-643)_v042211.1


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Mouse monoclonal to RNA polymerase II CTD repeat YSPTSPS antibody (4H8) - ChIP Grade. Antibody Target: POL2

characteristic: antibody antibodydescription

text: This gene encodes the largest subunit of RNA polymerase II, the polymerase responsible for synthesizing messenger RNA in eukaryotes

characteristic: antibody targetdescription

text: abcam

text: ATCC

characteristic: biomaterial provider

text: M

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: organism

characteristic: protocol

characteristic: protocol description

characteristic: replicate

text: MACS

text: HudsonAlpha_ChipSeq_PANC-1_Pol2-4H8_v041610.1


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Rabbit polyclonal IgG, epitope mapping at the C-terminus of ATF3 of human origin. Antibody Target: ATF3

text: Activating transcription factor 3. A bZIP transcription factor and member of the Ca2+/cAMP response element-binding (CREB) protein family. ATF3 is found to act both as an activator and repressor of transcription.

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

text: M

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_A549_ATF3_EtOH_0.02pct_v042211.1

characteristic: title

characteristic: treatment

text: 1 h with 0.02% Ethanol (Myers)

characteristic: treatment description


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Rabbit polyclonal IgG, epitope mapping at the C-terminus of Elf-1 of human origin. Antibody Target: ELF1

characteristic: antibody antibodydescription

text: This gene encodes an E26 transformation-specific related transcription factor. The encoded protein is primarily expressed in lymphoid cells and acts as both an enhancer and a repressor to regulate transcription of various genes. Alternative splicing results in multiple transcript variants. (provided by RefSeq)

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

text: ATCC

characteristic: biomaterial provider

text: M

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

text: MACS

text: HudsonAlpha_ChipSeq_A549_ELF1_(SC-631)_EtOH_0.02pct_v042211.1

text: 1 h with 0.02% Ethanol (Myers)


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Rabbit polyclonal. Antibody Target: RAD21

text: Synthetic peptide (Human) conjugated to KLH - which represents a portion of human Rad21 encoded within exon 14

text: abcam

characteristic: antibody vendorname

text: ATCC

text: F

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: organism

characteristic: protocol

characteristic: protocol description

characteristic: replicate

text: MACS

text: HudsonAlpha_ChipSeq_MCF-7_Rad21_v042211.1

text: No special treatment or protocol applies


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: NRSF

characteristic: antibody

text: Mouse monoclonal. Antibody Target: NRSF

characteristic: antibody antibodydescription

text: Neuron-restrictive silencer transcription factor

characteristic: antibody targetdescription

text: (Made by Protein Expression Center: pec@caltech.edu)

characteristic: antibody vendorid

text: Dr. David Anderson at Caltech

text: David Anderson, Caltech

text: ATCC

characteristic: biomaterial provider

text: M

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

text: 2x10^7 cells, fragmentation by bioruptor, one 15-cycle round of PCR (Myers)

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_PANC-1_NRSF_v041610.1

characteristic: title

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Mouse monoclonal to RNA polymerase II CTD repeat YSPTSPS antibody (4H8) - ChIP Grade. Antibody Target: POL2

text: abcam

characteristic: antibody vendorname

text: ATCC

text: F

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

text: MACS

text: SK-N-MC

text: HudsonAlpha_ChipSeq_SK-N-MC_Pol2-4H8_v041610.1


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Rabbit polyclonal IgG, epitope mapping at the C-terminus of YY1 of human origin. Antibody Target: YY1

characteristic: antibody antibodydescription

text: YY1 is a ubiquitously distributed transcription factor belonging to the GLI-Kruppel class of zinc finger proteins. The protein is involved in repressing and activating a diverse number of promoters. YY1 may direct histone deacetylases and histone acetyltransferases to a promoter in order to activate or repress the promoter, thus implicating histone modification in the function of YY1

characteristic: antibody targetdescription

text: Santa Cruz Biotechnology

text: ATCC

text: M

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: organism

characteristic: protocol

text: Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)

characteristic: protocol description

characteristic: replicate

text: MACS

text: HudsonAlpha_ChipSeq_A549_YY1_(SC-281)_EtOH_0.02pct_v042211.1

characteristic: treatment

text: 1 h with 0.02% Ethanol (Myers)


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: RevXlinkChromatin

text: ATCC

characteristic: biomaterial provider

characteristic: cell

text: epithelial cell line derived from a lung carcinoma tissue. (PMID: 175022), This line was initiated in 1972 by D.J. Giard, et al. through explant culture of lung carcinomatous tissue from a 58-year-old caucasian male. - ATCC, newly promoted to tier 2: not in 2011 analysis

characteristic: cell description

text: cancer

characteristic: cell karyotype

text: endoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: M

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

text: HudsonAlpha_ChipSeq_A549_RevXlinkChromatin_EtOH_0.02pct_v041610.1

characteristic: title

text: 1 h with 0.02% Ethanol (Myers)

characteristic: treatment description


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: RevXlinkChromatin

characteristic: antibody

text: ATCC

text: pancreatic carcinoma, (PMID: 1140870) PANC-1 was established from a pancreatic carcinoma, which was extracted via pancreatico-duodenectomy specimen from a 56-year-old Caucasian individual. Malignancy of this cell line was verified via in vitro and in vivo assays.

text: cancer

text: endoderm

text: human

text: M

characteristic: cell sex

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

characteristic: organism

characteristic: protocol

characteristic: protocol description

text: HudsonAlpha_ChipSeq_PANC-1_RevXlinkChromatin_v041610.1


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: RevXlinkChromatin

text: ATCC

characteristic: biomaterial provider

characteristic: cell

text: neuroectodermal cell line derived from a cerebral brain tumor, (PMID: 1316433)

characteristic: cell description

text: cancer

characteristic: cell karyotype

text: ectoderm

text: human

text: M

text: ChipSeq

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: replicate

text: HudsonAlpha_ChipSeq_PFSK-1_RevXlinkChromatin_v041610.1


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: RevXlinkChromatin

characteristic: antibody

text: ATCC

text: SK-N-SH

text: neuroblastoma, newly promoted to tier 2: not in 2011 analysis, the SK-N-SH line was established from a neuroblastoma in a 4 year old individual.

text: cancer

text: ectoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: F

characteristic: cell sex

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

text: Homo sapiens

text: SK-N-SH

text: HudsonAlpha_ChipSeq_SK-N-SH_RevXlinkChromatin_v041610.1

characteristic: title

text: No special treatment or protocol applies

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Kaiso (6F8) Mouse monoclonal IgG1. Raised against amino acids 1-504 representing full length Kaiso of human origin. Recommended for detection of Kaiso of m, r, h, canine and chicken origin by WB, IP, IF and ELISA. Antibody Target: ZBTB33

characteristic: antibody antibodydescription

text: KAISO is a transcriptional regulator that binds, via its zinc fingers, to DNA sequences containing methylated CGCG or to the consensus KAISO-binding site (KBS) TCCTGCNA

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

text: F

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: datatype description

characteristic: labexpid

text: Homo sapiens

characteristic: organism

characteristic: protocol

characteristic: protocol description

text: MACS

characteristic: softwareversion

text: SK-N-SH

text: HudsonAlpha_ChipSeq_SK-N-SH_ZBTB33_v042211.1


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Rabbit Polyclonal. Antibody Target: P300

text: Santa Cruz Biotechnology

text: ATCC

characteristic: biomaterial provider

text: F

characteristic: cell sex

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: replicate

text: MACS

text: HudsonAlpha_ChipSeq_MCF-7_p300_v042211.1

characteristic: title

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Rabbit polyclonal. Antibody Target: RAD21

characteristic: antibody antibodydescription

text: Synthetic peptide (Human) conjugated to KLH - which represents a portion of human Rad21 encoded within exon 14

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: abcam

characteristic: antibody vendorname

text: ATCC

text: F

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: datatype description

text: Homo sapiens

text: MACS

text: HudsonAlpha_ChipSeq_ECC-1_Rad21_v042211.1


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Rabbit polyclonal IgG, epitope mapping at the C-terminus of CEBPB of rat origin. Antibody Target: CEBPB

text: The protein encoded by this intronless gene is a bZIP transcription factor which can bind as a homodimer to certain DNA regulatory regions. It can also form heterodimers with the related proteins CEBP-alpha, CEBP-delta, and CEBP-gamma. The encoded protein is important in the regulation of genes involved in immune and inflammatory responses and has been shown to bind to the IL-1 response element in the IL-6 gene, as well as to regulatory regions of several acute-phase and cytokine genes. In addition, the encoded protein can bind the promoter and upstream element and stimulate the expression of the collagen type I gene (provided by RefSeq).

text: Santa Cruz Biotechnology

text: ATCC

characteristic: biomaterial provider

text: F

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: labexpid

text: Homo sapiens

characteristic: organism

characteristic: protocol

text: Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)

characteristic: protocol description

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_ECC-1_CEBPB_(SC-150)_v042211.1


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Mouse monoclonal to RNA polymerase II CTD repeat YSPTSPS antibody (4H8) - ChIP Grade. Antibody Target: POL2

text: This gene encodes the largest subunit of RNA polymerase II, the polymerase responsible for synthesizing messenger RNA in eukaryotes

text: abcam

text: CDI

text: M

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: replicate

text: MACS

text: HudsonAlpha_ChipSeq_H1-neurons_Pol2-4H8_v042211.1

characteristic: title

characteristic: treatment description


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: NRSF

characteristic: antibody

text: Mouse monoclonal. Antibody Target: NRSF

characteristic: antibody antibodydescription

text: Neuron-restrictive silencer transcription factor

characteristic: antibody targetdescription

text: (Made by Protein Expression Center: pec@caltech.edu)

characteristic: antibody vendorid

text: Dr. David Anderson at Caltech

characteristic: antibody vendorname

text: David Anderson, Caltech

text: CDI

characteristic: biomaterial provider

text: M

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: datatype description

text: Homo sapiens

text: MACS

text: HudsonAlpha_ChipSeq_H1-neurons_NRSF_v042211.1


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Mouse monoclonal (p250). Antibody Target: TAF1

text: TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa. Also designated TAF250.

text: Santa Cruz Biotechnology

text: CDI

text: M

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: labexpid

text: Homo sapiens

characteristic: organism

characteristic: protocol

characteristic: protocol description

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_H1-neurons_TAF1_v042211.1

text: No special treatment or protocol applies


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Rabbit polyclonal, USF-1 (C-20). Antibody Target: USF1

characteristic: antibody antibodydescription

text: The ubiquitously expressed cellular upstream stimulatory factor (USF) consists of USF-1 and USF-2 polypeptides which independently exhibit site-specific DNA binding and are members of the c-Myc-related family of regulatory factors containing helix-loop-helix domains. USF also contains a leucine repeat that is required for efficient DNA binding. USF was originally identified as an up- stream stimulatory factor that binds the core sequence CACGTG in the adeno- virus late promoter. These findings, together with the demonstration of coop- erative interaction between USF and the initiator-binding protein, TFII-I, raises the possibility of a more general involvement of USF in transcriptional regula- tion. While expression of both USF-1 and USF-2 species is ubiquitous, different ratios of USF homo- and heterodimers are found in different cell types.

characteristic: antibody targetdescription

text: Santa Cruz Biotechnology

text: ATCC

text: F

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: replicate

text: MACS

text: SK-N-SH

text: HudsonAlpha_ChipSeq_SK-N-SH_USF-1_v042211.1

characteristic: title

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Max

text: Rabbit polyclonal IgG, epitope mapping at the C-terminus of Max of human origin. Antibody Target: Max

text: The protein encoded by this gene is a member of the basic helix-loop-helix leucine zipper (bHLHZ) family of transcription factors. It is able to form homodimers and heterodimers with other family members, which include Mad, Mxi1 and Myc. Myc is an oncoprotein implicated in cell proliferation, differentiation and apoptosis. The homodimers and heterodimers compete for a common DNA target site (the E box) and rearrangement among these dimer forms provides a complex system of transcriptional regulation. Multiple alternatively spliced transcript variants have been described for this gene but the full-length nature for some of them is unknown (RefSeq).

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

text: F

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: datatype description

text: Homo sapiens

text: MACS


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Mouse monoclonal IgG1; raised against amino acids 254-327 mapping within the DNA binding and dimerization domain of human CREB-1. Antibody Target: CREB1

characteristic: antibody antibodydescription

text: This gene encodes a transcription factor that is a member of the leucine zipper family of DNA binding proteins. This protein binds as a homodimer to the cAMP-responsive element, an octameric palindrome. The protein is phosphorylated by several protein kinases, and induces transcription of genes in response to hormonal stimulation of the cAMP pathway. Alternate splicing of this gene results in two transcript variants encoding different isoforms. (provided by RefSeq)

characteristic: antibody targetdescription

text: Santa Cruz Biotechnology

text: ATCC

text: M

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: labexpid

text: Homo sapiens

characteristic: organism

characteristic: protocol

text: Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers)

characteristic: protocol description

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_HepG2_CREB1_(SC-240)_v042211.1


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Rabbit polyclonal IgG, epitope corresponding to amino acids 39-140 mapping near the N-terminus of ZEB1 of human origin. Antibody Target: ZEB1

text: This gene encodes a zinc finger transcription factor. The encoded protein likely plays a role in transcriptional repression of interleukin 2. Mutations in this gene have ben associated with posterior polymorphous corneal dystrophy-3 and late-onset Fuchs endothelial corneal dystrophy. Alternatively spliced transcript variants encoding different isoforms have been described. (provided by RefSeq).

text: Santa Cruz Biotechnology

text: ATCC

text: M

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: replicate

text: MACS

text: HudsonAlpha_ChipSeq_HepG2_ZEB1_(SC-25388)_v042211.1

characteristic: title

characteristic: treatment description


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Mouse monoclonal IgG, specific for an epitope mapping between amino acids 13-44 at the N-terminus of NR2F2 of human origin. Antibody Target: NR2F2

characteristic: antibody antibodydescription

text: This gene encodes a member of the steroid thyroid hormone superfamily of nuclear receptors. The encoded protein is a ligand inducible transcription factor that is involved in the regulation of many different genes. Alternate splicing results in multiple transcript variants. (provided by RefSeq)

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Santa Cruz Biotechnology

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

text: M

characteristic: cell sex

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: datatype description

text: Homo sapiens

text: MACS

text: HudsonAlpha_ChipSeq_HepG2_NR2F2_(SC-271940)_v042211.1


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Mouse monoclonal (p250). Antibody Target: TAF1

text: TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa. Also designated TAF250.

text: Santa Cruz Biotechnology

text: ATCC

text: F

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: labexpid

text: Homo sapiens

characteristic: organism

characteristic: protocol

characteristic: protocol description

text: MACS

characteristic: softwareversion

text: HudsonAlpha_ChipSeq_MCF-7_TAF1_v042211.1


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

characteristic: antibody antibodydescription

characteristic: antibody targetdescription

text: Santa Cruz Biotechnology

text: ATCC

text: M

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

text: Homo sapiens

characteristic: replicate

text: MACS

text: HudsonAlpha_ChipSeq_A549_TAF1_EtOH_0.02pct_v042211.1

characteristic: title

characteristic: treatment

text: 1 h with 0.02% Ethanol (Myers)

characteristic: treatment description