text: Washington University in St. Louis

text: live

text: Generic

text: Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => OAT:421.1,RICE:421.1,CHICK:105.3:APPLE:52.6

text: [Clostridium] symbiosum

text: mouse feces

text: E17_7_m1 [COPRO-Seq]


status: PUBLIC

characteristic: External Id

text: Washington University in St. Louis

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => CHICK:421.1,BEEF:421.1,PEA:105.3,APPLE:52.6

tag: attribute

characteristic: diet

text: [Clostridium] symbiosum

characteristic: organism

text: Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria

characteristic: sample source

text: mouse feces

text: Sample was taken after mouse was on the diet for 6 days.

characteristic: time

text: E17_6_m8 [COPRO-Seq]

characteristic: title


text: Washington University in St. Louis

text: live

text: Generic

text: Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEACH:421.1,BEEF:421.1,OAT:105.3,RICE:52.6

text: [Clostridium] symbiosum

text: mouse feces

text: E17_6_m7 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEA:421.1,CHICK:421.1,RICE:105.3,PEACH:52.6

text: [Clostridium] symbiosum

text: mouse feces

text: E17_6_m6 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => SWEET_POTATO:421.1,OAT:421.1,CHICK:105.3,RICE:52.6

text: [Clostridium] symbiosum

text: mouse feces

text: E17_6_m5 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEACH:421.1,OAT:421.1,SWEET_POTATO:105.3,BEEF:52.6

text: [Clostridium] symbiosum

text: mouse feces

text: E17_6_m4 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => SWEET_POTATO:421.1,RICE:421.1,CHICK:105.3,PEA:52.6

text: [Clostridium] symbiosum

text: mouse feces

text: E17_6_m3 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E17_6_m1 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: Sample was taken after mouse was on the diet for 4 days.

text: E17_4_m8 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E17_4_m7 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E17_4_m6 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E17_4_m5 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E17_4_m4 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E17_4_m3 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => OAT:421.1,APPLE:421.1,BEEF:105.3,RICE:52.6

text: [Clostridium] symbiosum

text: mouse feces

text: E17_4_m2 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E17_4_m1 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: Sample was taken after mouse was on the diet for 1 days.

text: E17_1_m8 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E17_1_m7 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E17_1_m6 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E17_1_m5 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E17_1_m4 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E17_1_m3 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E17_1_m2 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E17_1_m1 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEA:666.7,RICE:222.2,SWEET_POTATO:55.6,PEACH:55.6

text: [Clostridium] symbiosum

text: mouse feces

text: Sample was taken after mouse was on the diet for 7 days.

text: E15_7_m8 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => SWEET_POTATO:666.7,RICE:222.2,PEACH:55.6,BEEF:55.6

text: [Clostridium] symbiosum

text: mouse feces

text: E15_7_m7 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEA:666.7,CHICK:222.2,OAT:55.6,SWEET_POTATO:55.6

text: [Clostridium] symbiosum

text: mouse feces

text: E15_7_m5 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEACH:666.7,PEA:222.2,APPLE:55.6,CHICK:55.6

text: [Clostridium] symbiosum

text: mouse feces

text: E15_7_m4 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEACH:666.7,PEA:222.2,RICE:55.6,BEEF:55.6

text: [Clostridium] symbiosum

text: mouse feces

text: E15_7_m3 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEA:666.7,RICE:222.2,APPLE:55.6,BEEF:55.6

text: [Clostridium] symbiosum

text: mouse feces

text: E15_7_m1 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria

text: mouse feces

text: E15_6_m8 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: Sample was taken after mouse was on the diet for 6 days.

text: E15_6_m7 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => CHICK:666.7,PEACH:222.2,RICE:55.6,OAT:55.6

text: [Clostridium] symbiosum

text: mouse feces

text: E15_6_m6 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E15_6_m5 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E15_6_m3 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E15_6_m1 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E15_4_m8 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E15_4_m7 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E15_4_m6 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E15_4_m4 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E15_4_m3 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => CHICK:666.7,SWEET_POTATO:222.2,RICE:55.6,OAT:55.6

text: [Clostridium] symbiosum

text: mouse feces

text: E15_4_m2 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E15_4_m1 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E15_1_m8 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E15_1_m7 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E15_1_m5 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E15_1_m4 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E15_1_m3 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E15_1_m2 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E15_1_m1 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEACH:666.7,OAT:222.2,SWEET_POTATO:55.6,CHICK:55.6

text: [Clostridium] symbiosum

text: mouse feces

text: E13_7_m8 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEA:666.7,APPLE:222.2,SWEET_POTATO:55.6,PEACH:55.6

text: [Clostridium] symbiosum

text: mouse feces

text: E13_7_m7 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => APPLE:666.7,BEEF:222.2,CHICK:55.6,PEACH:55.6

text: [Clostridium] symbiosum

text: mouse feces

text: E13_7_m6 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => APPLE:666.7,PEACH:222.2,CHICK:55.6,RICE:55.6

text: [Clostridium] symbiosum

text: mouse feces

text: E13_7_m5 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => APPLE:666.7,OAT:222.2,CHICK:55.6,BEEF:55.6

text: [Clostridium] symbiosum

text: mouse feces

text: E13_7_m4 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => CHICK:666.7,PEACH:222.2,BEEF:55.6,RICE:55.6

text: [Clostridium] symbiosum

text: mouse feces

text: E13_7_m2 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => SWEET_POTATO:666.7,OAT:222.2,PEACH:55.6,PEA:55.6

text: [Clostridium] symbiosum

text: mouse feces

text: E13_7_m1 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E13_6_m5 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E13_6_m4 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E13_6_m1 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: Sample was taken after mouse was on the diet for 4 days.

text: E13_4_m8 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E13_4_m7 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E13_4_m6 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E13_4_m5 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E13_4_m4 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => BEEF:666.7,RICE:222.2,PEA:55.6,CHICK:55.6

text: [Clostridium] symbiosum

text: mouse feces

text: E13_4_m3 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E13_4_m1 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: Sample was taken after mouse was on the diet for 1 days.

text: E13_1_m8 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E13_1_m7 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E13_1_m6 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E13_1_m5 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E13_1_m4 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E13_1_m3 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E13_1_m2 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E13_1_m1 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => BEEF:666.7,PEACH:222.2,SWEET_POTATO:55.6,RICE:55.6

text: [Clostridium] symbiosum

text: mouse feces

text: Sample was taken after mouse was on the diet for 7 days.

text: E11_7_m8 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => RICE:666.7,APPLE:222.2,SWEET_POTATO:55.6,BEEF:55.6

text: [Clostridium] symbiosum

text: mouse feces

text: E11_7_m7 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => SWEET_POTATO:666.7,APPLE:222.2,BEEF:55.6,PEACH:55.6

text: [Clostridium] symbiosum

text: Fecal pellet from a mouse (c57Bl6) colonized with 10-gut bacteria

text: mouse feces

text: E11_7_m6 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEACH:666.7,PEA:222.2,OAT:55.6,RICE:55.6

text: [Clostridium] symbiosum

text: mouse feces

text: E11_7_m4 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => SWEET_POTATO:666.7,CHICK:222.2,BEEF:55.6,PEA:55.6

text: [Clostridium] symbiosum

text: mouse feces

text: E11_7_m3 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => PEA:666.7,PEACH:222.2,CHICK:55.6,OAT:55.6

text: [Clostridium] symbiosum

text: mouse feces

text: E11_7_m2 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => APPLE:666.7,PEACH:222.2,CHICK:55.6,SWEET_POTATO:55.6

text: [Clostridium] symbiosum

text: mouse feces

text: E11_7_m1 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: Mouse was fed a meal of human pureed food in the following concentrations (g/kg) => OAT:666.7,RICE:222.2,BEEF:55.6,SWEET_POTATO:55.6

text: [Clostridium] symbiosum

text: mouse feces

text: Sample was taken after mouse was on the diet for 6 days.

text: E11_6_m5 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E11_6_m4 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E11_6_m3 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E11_6_m2 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E11_4_m8 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E11_4_m7 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E11_4_m5 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E11_4_m4 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E11_4_m1 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E11_1_m8 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E11_1_m7 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E11_1_m6 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E11_1_m5 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E11_1_m4 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E11_1_m3 [COPRO-Seq]


text: Washington University in St. Louis

text: live

text: Generic

text: [Clostridium] symbiosum

text: mouse feces

text: E11_1_m1 [COPRO-Seq]


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Salix purpurea

characteristic: description

text: Salix purpurea

characteristic: sample number

text: Generic sample from Salix purpurea


text: live

text: Generic

characteristic: strain

text: Generic sample from Marine Group III euryarchaeote SCGC AAA007-O11


characteristic: External Id

text: live

text: Generic

text: Panicum hallii var filipes

text: Panicum hallii

text: var filipes

text: Sample from Panicum hallii


characteristic: INSDC center name

text: live

text: Generic

text: Porphyra umbilicalus

text: Porphyra umbilicalis

text: Generic sample from Porphyra umbilicalis


characteristic: INSDC first public

text: live

text: Generic

text: Oidiodendron maius Zn

text: Oidiodendron maius Zn

text: Zn

text: Generic sample from Oidiodendron maius Zn


characteristic: INSDC last update

text: live

text: Generic

text: Generic sample from Marine Group III euryarchaeote SCGC AAA288-E19


characteristic: INSDC secondary accession

text: live

text: Generic

text: gamma proteobacterium SCGC AAA001-B15

text: gamma proteobacterium SCGC AAA001-B15

text: Generic sample from gamma proteobacterium SCGC AAA001-B15


text: live

characteristic: INSDC status

text: Generic

text: gamma proteobacterium SCGC AAA007-O20

text: gamma proteobacterium SCGC AAA007-O20

text: Generic sample from gamma proteobacterium SCGC AAA007-O20


text: Uppsala University, Department of Ecology and Genetics

text: live

text: Generic

characteristic: NCBI submission model

text: uncultured bacterium

text: Coherent dynamics and association networks among lake bacterioplankton taxa


text: live

text: Generic

characteristic: NCBI submission package

text: Porphyra umbilicalis

text: Porphyra umbilicalis


text: live

text: Generic

characteristic: SRA accession

text: Generic sample from SAR324 cluster bacterium SCGC AAA240-J09


text: live

text: Generic

text: Marine Group II euryarchaeote SCGC AAA288-C18

text: euryarchaeote SCGC AAA288-C18

text: Generic sample from euryarchaeote SCGC AAA288-C18


text: Cleveland Clinic Foundation

text: live

text: Generic

text: Homo sapiens

text: Normal colon sample 1 (N1)


text: live

text: Generic

text: Candidatus Poribacteria sp. WGA-4E

text: Candidatus Poribacteria bacterium WGA-4E

text: Generic sample from Candidatus Poribacteria sp. WGA-4E


text: Cleveland Clinic Foundation

text: live

text: Generic

text: Homo sapiens

text: Normal colon sample 2 (N2)


text: Cleveland Clinic Foundation

text: live

text: Generic

text: Homo sapiens

text: Normal colon sample 3 (N3)


text: Cleveland Clinic Foundation

text: live

text: Generic

text: This is a colon cancer sample from a male patient. The cancer was defined as a non-CIMP tumor by satisfying the criteria of having no DNA methylation at CACNA1G, IGF2, NEUROG1, RUNX3, and SOCS1, harboring KRAS mutation, and is microsatellite stable.

text: Homo sapiens

text: Colon cancer sample 1 (T1)


text: Cleveland Clinic Foundation

text: live

text: Generic

text: Homo sapiens

text: Colon cancer sample 2 (T2)


text: Cleveland Clinic Foundation

text: live

text: Generic

text: Homo sapiens

text: Colon cancer sample 3 (T3)


text: Cleveland Clinic Foundation

text: live

text: Generic

text: This is a colon cancer sample from a male patient. The cancer was defined as a CIMP tumor by satisfying the criteria of having DNA methylation at CACNA1G, IGF2, NEUROG1, RUNX3, and SOCS1, harboring BRAF mutation, and is microsatellite unstable.

text: Homo sapiens

text: Colon cancer sample 4 (T4)


text: Cleveland Clinic Foundation

text: live

text: Generic

text: Homo sapiens

text: Colon cancer sample 5 (T5)


text: Cleveland Clinic Foundation

text: live

text: Generic

text: Homo sapiens

text: Colon cancer sample 6 (T6)


text: live

text: Generic

text: Tolypothrix sp. PCC 9009

text: [Scytonema hofmanni] UTEX 2349

text: UTEX 2349

text: Generic sample from Scytonema hofmanni UTEX 2349


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Streptomyces viridosporus T7A

text: Streptomyces viridosporus T7A

text: Generic sample from Streptomyces viridosporus T7A


text: live

text: Generic

text: Generic sample from SAR324 cluster bacterium SCGC AAA001-C10


text: live

text: Generic

text: Capsella rubella Mte. Gargano (Italy)

text: Capsella rubella

text: Mte. Gargano (Italy)

text: Sample from Capsella rubella


text: University of Calgary - Sun Center of Excellence for Visual Genomics

text: live

text: Generic

text: ESTs derived from the trichome of Primula obconica.

text: Primula obconica


text: live

text: Generic

text: ESTs derived from the cone of Humulus lupulus.

text: Humulus lupulus


text: live

text: Generic

text: Panicum virgatum AP13

text: Panicum virgatum

text: Sample from Panicum virgatum


text: live

text: Generic

text: ESTs derived from the flower and leaf of Arnica chamissonis.

text: Arnica chamissonis


text: live

text: Generic

text: ESTs derived from the leaf of Lippia dulcis.

text: Phyla dulcis


text: live

text: Generic

text: ESTs derived from the root of Valeriana officinalis.

text: Valeriana officinalis


text: live

text: Generic

text: ESTs derived from the ethylene treated flavedo of Citrus paradisi.

text: Citrus x paradisi


text: live

text: Generic

text: Thermococcus sp. PK

text: Thermococcus sp. PK

text: PK

text: Generic sample from Thermococcus sp. PK


text: live

text: Generic

text: Saccharomonospora marina XMU15

text: Saccharomonospora marina XMU15

text: Generic sample from Saccharomonospora marina XMU15


text: live

text: Generic

text: Saccharomonospora saliphila YIM 90502

text: Saccharomonospora saliphila YIM 90502

text: YIM 90502

text: Generic sample from Saccharomonospora saliphila YIM 90502


text: live

text: Generic

text: Saccharomonospora iraqiensis subsp. paurometabolica YIM 90007

text: YIM 90007

text: paurometabolica

characteristic: sub species

text: Generic sample from Saccharomonospora paurometabolica YIM 90007

text: type strain of Saccharomonospora paurometabolica

characteristic: type material


text: live

text: Generic

text: Saccharomonospora cyanea NA-134

text: Saccharomonospora cyanea NA-134

characteristic: organism

text: Generic sample from Saccharomonospora cyanea NA-134


text: live

text: Generic

text: Serratia sp. S4

text: Serratia sp. S4

text: Generic sample from Serratia sp. S4


text: live

text: Generic

text: Cercospora zeae-maydis SCOH1-5

text: Cercospora zeae-maydis SCOH1-5

text: Generic sample from Cercospora zeae-maydis SCOH1-5


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Serpula lacrymans var. shastensis

text: var. shastensis

text: Generic sample from Serpula lacrymans var. shastensis SHA21-2


text: live

text: Generic

text: Roseobacter sp. LE17

text: Roseobacter sp. LE17

text: Generic sample from Roseobacter sp. LE17


text: live

text: Generic

text: Aspergillus brasiliensis CBS 101740

text: Aspergillus brasiliensis CBS 101740

text: CBS 101740

text: Generic sample from Aspergillus brasiliensis CBS 101740


text: live

text: Generic

characteristic: culture-collection

text: Aspergillus tubingensis CBS 134.48

text: Aspergillus tubingensis CBS 134.48

text: CBS 134.48

text: Generic sample from Aspergillus tubingensis CBS 134.48


text: live

text: Generic

text: Synechococcus sp. WH 8016

text: Synechococcus sp. WH 8016

text: WH 8016

text: Generic sample from Synechococcus sp. WH 8016

characteristic: title


text: live

text: Generic

characteristic: description

text: DSM 13641

text: Generic sample from Caldanaerobius polysaccharolyticus DSM 13641


text: live

text: Generic

text: Actinobacillus succinogenes 130Z

text: Actinobacillus succinogenes 130Z

characteristic: sample number

text: Generic sample from Actinobacillus succinogenes 130Z


text: live

text: Generic

text: Acidithiobacillus ferrivorans SS3

text: Acidithiobacillus ferrivorans SS3

characteristic: strain

text: Sample from Acidithiobacillus ferrivorans SS3


characteristic: External Id

text: live

text: Generic

text: Saccharomonospora azurea NA-128

text: Saccharomonospora azurea NA-128

text: Generic sample from Saccharomonospora azurea NA-128


characteristic: INSDC center name

text: live

text: Generic

text: Escherichia coli K-12

text: Sample from Escherichia coli str. K-12 substr. MG1655


characteristic: INSDC first public

text: live

text: Generic

text: Escherichia coli K-12

text: Escherichia coli str. K-12 substr. MG1655


text: Fire, Genetics, Stanford University

characteristic: INSDC last update

text: live

text: Generic

text: ego-1(om84) unc-29(e193) fem-1(hc17)

characteristic: genotype

text: Caenorhabditis elegans

text: mRNAseq

characteristic: rna-seq method

text: L3 hermaphrodite


text: Fire, Genetics, Stanford University

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: unc-29(e193) fem-1(hc17)

text: Caenorhabditis elegans

text: mRNAseq

text: L3 hermaphrodite


text: Fire, Genetics, Stanford University

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: ego-1(om84) unc-29(e193) fem-1(hc17)

text: Caenorhabditis elegans

text: mRNAseq

text: L4 hermaphrodite


text: Fire, Genetics, Stanford University

text: live

text: Generic

text: unc-29(e193) fem-1(hc17)

text: Caenorhabditis elegans

characteristic: organism

text: mRNAseq

text: L4 hermaphrodite


text: Fire, Genetics, Stanford University

text: live

text: Generic

text: ego-1(om84) unc-29(e193) fem-1(hc17)

text: Caenorhabditis elegans

text: mRNAseq

text: Adult hermaphrodite


text: Fire, Genetics, Stanford University

text: live

text: Generic

text: unc-29(e193) fem-1(hc17)

text: Caenorhabditis elegans

text: mRNAseq

text: Adult hermaphrodite


text: Fire, Genetics, Stanford University

text: live

text: Generic

text: ego-1(om84) unc-29(e193) fem-1(hc17)

text: Caenorhabditis elegans

text: Adult hermaphrodite


text: Fire, Genetics, Stanford University

text: live

text: Generic

text: unc-29(e193) fem-1(hc17)

text: Caenorhabditis elegans

text: Adult hermaphrodite


text: Fire, Genetics, Stanford University

text: live

text: Generic

text: ego-1(om84) unc-29(e193) fem-1(hc17)

text: Caenorhabditis elegans

text: L3 hermaphrodite


text: Fire, Genetics, Stanford University

text: live

text: Generic

text: unc-29(e193) fem-1(hc17)

text: Caenorhabditis elegans

text: L3 hermaphrodite


text: Fire, Genetics, Stanford University

text: live

text: Generic

text: ego-1(om84) unc-29(e193) fem-1(hc17)

text: Caenorhabditis elegans

text: L4 hermaphrodite


text: Fire, Genetics, Stanford University

text: live

text: Generic

text: unc-29(e193) fem-1(hc17)

text: Caenorhabditis elegans

text: L4 hermaphrodite


text: live

text: Generic

text: Pseudoxanthomonas suwonensis 11-1

text: Pseudoxanthomonas suwonensis 11-1

text: Generic sample from Pseudoxanthomonas suwonensis 11-1


text: live

text: Generic

text: Thermophilic enrichment culture SG0.5Z960

text: compost metagenome

text: Sample from compost metagenome


text: live

text: Generic

text: Geobacillus sp. C56-T3

text: Geobacillus sp. C56-T3

text: Generic sample from Geobacillus sp. C56-T3


text: live

text: Generic

text: Bacillus cellulosilyticus DSM 2522

text: Evansella cellulosilytica DSM 2522

text: DSM 2522

text: Generic sample from Bacillus cellulosilyticus DSM 2522

text: type strain of Bacillus cellulosilyticus

characteristic: type material


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Pantoea sp. At-9b

text: Pantoea sp. At-9b

text: Sample from Pantoea sp. At-9b

characteristic: title


text: live

text: Generic

text: Escherichia coli K-12

characteristic: description


text: live

text: Generic

text: Streptomyces sp. M74

text: Streptomyces sp. M74

characteristic: sample number

text: Generic sample from Streptomyces sp. M74


text: live

text: Generic

text: Streptomyces sp. M17

text: Streptomyces sp. M17

characteristic: strain

text: Generic sample from Streptomyces sp. M17


characteristic: External Id

text: live

text: Generic

text: Lottia digitalis

text: Lottia digitalis

text: Generic sample from Lottia digitalis


text: Gene Expression Omnibus

characteristic: INSDC center name

text: live

text: Generic

text: James Thomson, Morgridge Institute for Research, University of Wisconsin-Madison

characteristic: biomaterial provider

text: Cell Line

characteristic: biomaterial type

text: iPS DF 19.11 Cell Line, Induced pluripotent stem cel, derived from fibroblast. the first set of numbers before the period refer to different clones, the number after the period indicates the sub-clone.

characteristic: differentiation method

text: Induced pluripotent stem cell

characteristic: differentiation stage

text: iPS DF 19.11 Cell Line

characteristic: line

text: Derived from newborn foreskin fibroblast: Cat# CRL-2097TM, ATCC

characteristic: lineage

text: genomic DNA

characteristic: molecule

text: Homo sapiens

characteristic: passage

text: Generic sample from Homo sapiens


text: Gene Expression Omnibus

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Cell Line

text: iPS DF 19.7 Cell Line, Induced pluripotent stem cel, derived from fibroblast. the first set of numbers before the period refer to different clones, the number after the period indicates the sub-clone.

text: Induced pluripotent stem cell

text: iPS DF 19.7 Cell Line

text: genomic DNA

text: Homo sapiens

text: Generic sample from Homo sapiens


characteristic: External Id

text: Gene Expression Omnibus

text: live

text: Generic

text: Cell Line

text: iPS DF 4.7 Cell Line, Induced pluripotent stem cel, derived from fibroblast. the first set of numbers before the period refer to different clones, the number after the period indicates the sub-clone.

characteristic: description

text: Induced pluripotent stem cell

text: iPS DF 4.7 Cell Line

text: genomic DNA

text: Homo sapiens

characteristic: organism

text: Generic sample from Homo sapiens

characteristic: title


text: Gene Expression Omnibus

characteristic: INSDC center name

text: live

text: Generic

characteristic: biomaterial provider

text: Cell Line

characteristic: biomaterial type

text: iPS DF 6.9 Cell Line, Induced pluripotent stem cel, derived from fibroblast. the first set of numbers before the period refer to different clones, the number after the period indicates the sub-clone.

characteristic: differentiation method

text: Induced pluripotent stem cell

text: iPS DF 6.9 Cell Line

text: genomic DNA

text: Homo sapiens

text: Generic sample from Homo sapiens


text: Gene Expression Omnibus

text: live

text: Generic

text: FHCRC HEIMFELD

text: Primary Cell

text: CD14 Primary Cells

characteristic: cell type

text: flow sorted CD14+ Cells,year 21

text: year 21

characteristic: donor age

text: Caucasian

characteristic: donor ethnicity

text: RO 01679

characteristic: donor id

text: male

characteristic: donor sex

characteristic: markers

text: genomic DNA

characteristic: molecule

text: Homo sapiens

text: Generic sample from Homo sapiens


text: Gene Expression Omnibus

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: FHCRC HEIMFELD

text: Primary Cell

text: CD3 Primary Cells

text: flow sorted CD3+ Cells,year 21

text: year 21

text: Caucasian

text: RO 01679

text: male

text: genomic DNA

text: Homo sapiens

text: Generic sample from Homo sapiens


characteristic: External Id

text: Gene Expression Omnibus

characteristic: INSDC center name

text: live

text: Generic

characteristic: SRA accession

text: FHCRC HEIMFELD

text: Primary Cell

text: Mobilized CD34 Primary Cells

text: flow sorted CD34+ Primary Cells, Mobilized, year 23

characteristic: description

text: year 23

text: Caucasian

text: RO 01525

text: male

text: genomic DNA

text: Homo sapiens

characteristic: organism

text: Generic sample from Homo sapiens

characteristic: title


text: Gene Expression Omnibus

text: live

text: Generic

text: FHCRC HEIMFELD

characteristic: biomaterial provider

text: Primary Cell

characteristic: biomaterial type

text: CD4 Primary Cells

characteristic: cell type

text: flow sorted CD4+ Cells,year 33

text: year 33

characteristic: donor age

text: Caucasian

characteristic: donor ethnicity

text: RO 01549

text: female

text: genomic DNA

text: Homo sapiens

text: Generic sample from Homo sapiens


text: Gene Expression Omnibus

characteristic: INSDC first public

text: live

text: Generic

text: FHCRC HEIMFELD

text: Primary Cell

text: CD4 Primary Cells

text: flow sorted CD4+ Cells,year 21

text: year 21

text: Caucasian

text: RO 01679

characteristic: donor id

text: male

characteristic: donor sex

characteristic: markers

text: genomic DNA

characteristic: molecule

text: Homo sapiens

text: Generic sample from Homo sapiens


text: Gene Expression Omnibus

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: FHCRC HEIMFELD

text: Primary Cell

text: Mobilized CD56 Primary Cells

text: flow sorted CD56+ Primary Cells, Mobilized, year 34

text: year 34

text: Caucasian

text: RO 01689

text: female

text: genomic DNA

text: Homo sapiens

text: Generic sample from Homo sapiens


characteristic: External Id

text: Gene Expression Omnibus

characteristic: INSDC center name

text: live

text: Generic

characteristic: SRA accession

text: FHCRC HEIMFELD

text: Primary Cell

text: CD56 Primary Cells

text: flow sorted CD56+ Cells,year 21

characteristic: description

text: year 21

text: Caucasian

text: RO 01679

text: male

text: genomic DNA

text: Homo sapiens

characteristic: organism

text: Generic sample from Homo sapiens


text: Gene Expression Omnibus

text: live

text: Generic

text: FHCRC HEIMFELD

characteristic: biomaterial provider

text: Primary Cell

characteristic: biomaterial type

text: CD8 Primary Cells

characteristic: cell type

text: flow sorted CD8+ Cells,year 33

text: year 33

characteristic: donor age

text: Caucasian

text: RO 01549

text: female

text: genomic DNA

text: Homo sapiens

text: Generic sample from Homo sapiens

characteristic: title


text: Gene Expression Omnibus

characteristic: INSDC first public

text: live

text: Generic

text: FHCRC HEIMFELD

text: Primary Cell

text: CD8 Primary Cells

text: flow sorted CD8+ Cells,year 21

text: year 21

text: Caucasian

characteristic: donor ethnicity

text: RO 01679

characteristic: donor id

text: male

characteristic: donor sex

characteristic: markers

text: genomic DNA

text: Homo sapiens

text: Generic sample from Homo sapiens


text: Gene Expression Omnibus

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: University of Washington, Congenital Defects Lab. Ian Glass

text: Primary Tissue

text: fetal

characteristic: collection method

text: Fetal Adrenal Gland primary tissue, day 85

text: day 85

text: male

text: genomic DNA

characteristic: molecule

text: Homo sapiens

text: UW

characteristic: tissue depot

text: Fetal Adrenal Gland

characteristic: tissue type

text: Generic sample from Homo sapiens


characteristic: External Id

text: Gene Expression Omnibus

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: biomaterial provider

text: Primary Tissue

characteristic: biomaterial type

text: fetal

text: Fetal Brain primary tissue, day 112

characteristic: description

text: day 112

text: genomic DNA

text: Homo sapiens

characteristic: organism

text: UW

text: Fetal Brain

text: Generic sample from Homo sapiens


text: Gene Expression Omnibus

characteristic: INSDC first public

text: live

text: Generic

text: Primary Tissue

text: fetal

text: Fetal Brain primary tissue, day 142

text: day 142

characteristic: donor age

characteristic: donor id

text: female

characteristic: donor sex

text: genomic DNA

text: Homo sapiens

text: UW

text: Fetal Brain

text: Generic sample from Homo sapiens

characteristic: title


text: Gene Expression Omnibus

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Primary Tissue

text: fetal

characteristic: collection method

text: Fetal Heart primary tissue, day 117

text: day 117

text: female

text: genomic DNA

text: Homo sapiens

text: UW

text: Fetal Heart

text: Generic sample from Homo sapiens


characteristic: External Id

text: Gene Expression Omnibus

characteristic: INSDC center name

text: live

text: Generic

text: Primary Tissue

text: fetal

text: Fetal Heart primary tissue, day 96

text: day 96

text: male

text: genomic DNA

characteristic: molecule

text: Homo sapiens

text: UW

characteristic: tissue depot

text: Fetal Heart

characteristic: tissue type

text: Generic sample from Homo sapiens


text: Gene Expression Omnibus

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: biomaterial provider

text: Primary Tissue

characteristic: biomaterial type

text: fetal

text: Fetal Heart primary tissue, day 103

characteristic: description

text: day 103

text: female

text: genomic DNA

text: Homo sapiens

text: UW

text: Fetal Heart

text: Generic sample from Homo sapiens


text: Gene Expression Omnibus

characteristic: INSDC first public

text: live

text: Generic

text: Primary Tissue

text: fetal

text: Fetal Heart primary tissue, day 105

text: day 105

characteristic: donor age

characteristic: donor id

text: male

characteristic: donor sex

text: genomic DNA

text: Homo sapiens

characteristic: organism

text: UW

text: Fetal Heart

text: Generic sample from Homo sapiens


text: Gene Expression Omnibus

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Primary Tissue

text: fetal

text: Fetal Heart primary tissue, day 147

text: day 147

text: female

text: genomic DNA

text: Homo sapiens

text: UW

text: Fetal Heart

text: Generic sample from Homo sapiens

characteristic: title


characteristic: External Id

text: Gene Expression Omnibus

characteristic: INSDC center name

text: live

text: Generic

text: Primary Tissue

text: fetal

characteristic: collection method

text: Fetal Heart primary tissue, day 110

text: day 110

text: female

text: genomic DNA

characteristic: molecule

text: Homo sapiens

text: UW

characteristic: tissue depot

text: Fetal Heart

text: Generic sample from Homo sapiens


text: Gene Expression Omnibus

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: biomaterial provider

text: Primary Tissue

characteristic: biomaterial type

text: fetal

text: Fetal Heart primary tissue, day 110

text: day 110

text: male

text: genomic DNA

text: Homo sapiens

text: UW

text: Fetal Heart

characteristic: tissue type

text: Generic sample from Homo sapiens


text: Gene Expression Omnibus

characteristic: INSDC first public

text: live

text: Generic

text: Primary Tissue

text: fetal

text: Fetal Intestine, Large primary tissue, day 103

characteristic: description

text: day 103

characteristic: donor age

characteristic: donor id

text: female

characteristic: donor sex

text: genomic DNA

text: Homo sapiens

text: UW

text: Fetal Intestine, Large

text: Generic sample from Homo sapiens


text: Gene Expression Omnibus

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Primary Tissue

text: fetal

text: Fetal Intestine, Large primary tissue, day 105

text: day 105

text: male

text: genomic DNA

text: Homo sapiens

characteristic: organism

text: UW

text: Fetal Intestine, Large

text: Generic sample from Homo sapiens


characteristic: External Id

text: Gene Expression Omnibus

characteristic: INSDC center name

text: live

text: Generic

text: Primary Tissue

text: fetal

characteristic: collection method

text: Fetal Intestine, Large primary tissue, day 110

text: day 110

text: female

text: genomic DNA

characteristic: molecule

text: Homo sapiens

text: UW

text: Fetal Intestine, Large

text: Generic sample from Homo sapiens

characteristic: title


text: Gene Expression Omnibus

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: biomaterial provider

text: Primary Tissue

characteristic: biomaterial type

text: fetal

text: Fetal Intestine, Small primary tissue, day 110

text: day 110

text: female

text: genomic DNA

text: Homo sapiens

text: UW

characteristic: tissue depot

text: Fetal Intestine, Small

text: Generic sample from Homo sapiens


text: Gene Expression Omnibus

characteristic: INSDC first public

text: live

text: Generic

text: Primary Tissue

text: fetal

text: Fetal Intestine, Small primary tissue, day 105

characteristic: description

text: day 105

characteristic: donor age

characteristic: donor id

text: female

text: genomic DNA

text: Homo sapiens

text: UW

text: Fetal Intestine, Small

characteristic: tissue type

text: Generic sample from Homo sapiens


text: Gene Expression Omnibus

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Primary Tissue

text: fetal

text: Fetal Kidney primary tissue, day 105

text: day 105

text: male

characteristic: donor sex

text: genomic DNA

text: Homo sapiens

text: UW

text: Fetal Kidney

text: Generic sample from Homo sapiens


characteristic: External Id

text: Gene Expression Omnibus

characteristic: INSDC center name

text: live

text: Generic

text: Primary Tissue

text: fetal

characteristic: collection method

text: Fetal Kidney, Left primary tissue, day 147

text: day 147

text: female

text: genomic DNA

characteristic: molecule

text: Homo sapiens

characteristic: organism

text: UW

text: Fetal Kidney, Left

text: Generic sample from Homo sapiens


text: Gene Expression Omnibus

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: biomaterial provider

text: Primary Tissue

characteristic: biomaterial type

text: fetal

text: Fetal Kidney, Left primary tissue, day 110

text: day 110

text: female

text: genomic DNA

text: Homo sapiens

text: UW

text: Fetal Kidney, Left

text: Generic sample from Homo sapiens

characteristic: title


text: Gene Expression Omnibus

characteristic: INSDC first public

text: live

text: Generic

text: Primary Tissue

text: fetal

text: Fetal Kidney, Left primary tissue, day 115

characteristic: description

text: day 115

characteristic: donor age

characteristic: donor id

text: male

text: genomic DNA

text: Homo sapiens

text: UW

characteristic: tissue depot

text: Fetal Kidney, Left

text: Generic sample from Homo sapiens


text: Gene Expression Omnibus

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Primary Tissue

text: fetal

text: Fetal Kidney, Right primary tissue, day 117

text: day 117

text: female

text: genomic DNA

text: Homo sapiens

text: UW

text: Fetal Kidney, Right

characteristic: tissue type

text: Generic sample from Homo sapiens


characteristic: External Id

text: Gene Expression Omnibus

characteristic: INSDC center name

text: live

text: Generic

text: Primary Tissue

text: fetal

characteristic: collection method

text: Fetal Kidney, Right primary tissue, day 147

text: day 147

text: female

characteristic: donor sex

text: genomic DNA

characteristic: molecule

text: Homo sapiens

text: UW

text: Fetal Kidney, Right

text: Generic sample from Homo sapiens


text: Gene Expression Omnibus

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: biomaterial provider

text: Primary Tissue

characteristic: biomaterial type

text: fetal

text: Fetal Kidney, Right primary tissue, day 115

text: day 115

text: male

text: genomic DNA

text: Homo sapiens

characteristic: organism

text: UW

text: Fetal Kidney, Right

text: Generic sample from Homo sapiens


text: Gene Expression Omnibus

characteristic: INSDC first public

text: live

text: Generic

text: Primary Tissue

text: fetal

text: Fetal Lung primary tissue, day 112

characteristic: description

text: day 112

characteristic: donor age

characteristic: donor id

text: genomic DNA

text: Homo sapiens

text: UW

text: Fetal Lung

text: Generic sample from Homo sapiens

characteristic: title


text: Gene Expression Omnibus

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Primary Tissue

text: fetal

text: Fetal Lung primary tissue, day 82

text: day 82

text: male

text: genomic DNA

text: Homo sapiens

text: UW

characteristic: tissue depot

text: Fetal Lung

text: Generic sample from Homo sapiens


characteristic: External Id

text: Gene Expression Omnibus

characteristic: INSDC center name

text: live

text: Generic

text: Primary Tissue

text: fetal

characteristic: collection method

text: Fetal Lung, Left primary tissue, day 117

text: day 117

text: female

characteristic: donor sex

text: genomic DNA

text: Homo sapiens

text: UW

text: Fetal Lung, Left

characteristic: tissue type

text: Generic sample from Homo sapiens


text: Gene Expression Omnibus

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: biomaterial provider

text: Primary Tissue

characteristic: biomaterial type

text: fetal

text: Fetal Lung, Left primary tissue, day 110

text: day 110

text: female

text: genomic DNA

characteristic: molecule

text: Homo sapiens

text: UW

text: Fetal Lung, Left

text: Generic sample from Homo sapiens


text: Gene Expression Omnibus

characteristic: INSDC first public

text: live

text: Generic

text: Primary Tissue

text: fetal

text: Fetal Lung, Right primary tissue, day 117

characteristic: description

text: day 117

characteristic: donor age

characteristic: donor id

text: female

text: genomic DNA

text: Homo sapiens

characteristic: organism

text: UW

text: Fetal Lung, Right

text: Generic sample from Homo sapiens


text: Gene Expression Omnibus

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Primary Tissue

text: fetal

text: Fetal Lung, Right primary tissue, day 110

text: day 110

text: female

text: genomic DNA

text: Homo sapiens

text: UW

text: Fetal Lung, Right

text: Generic sample from Homo sapiens

characteristic: title


characteristic: External Id

text: Gene Expression Omnibus

characteristic: INSDC center name

text: live

text: Generic

text: University of Washington, Congenital Defects Lab. Ian Glass

text: Primary Tissue

text: fetal

characteristic: collection method

text: Fetal Lung, Right primary tissue, day 115

text: day 115

text: male

characteristic: donor sex

text: genomic DNA

text: Homo sapiens

text: UW

characteristic: tissue depot

text: Fetal Lung, Right

text: Generic sample from Homo sapiens


text: Gene Expression Omnibus

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: biomaterial provider

text: Primary Tissue

characteristic: biomaterial type

text: fetal

text: Fetal Thymus primary tissue, day 147

text: day 147

text: female

text: genomic DNA

text: Homo sapiens

text: UW

text: Fetal Thymus

characteristic: tissue type

text: Generic sample from Homo sapiens


text: Joint Genome Institute, U.S. Department of Energy

characteristic: INSDC first public

text: live

text: Generic

text: Streptomyces sp. M43

characteristic: description

text: Streptomyces sp. M43

characteristic: sample number

characteristic: strain

text: Generic sample from Streptomyces sp. M43


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Thermophilic enrichment culture SG0.5JP960

text: compost metagenome

characteristic: organism

text: Sample from compost metagenome


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

text: Escherichia coli K-12

text: Sample from Escherichia coli str. K-12 substr. MG1655

characteristic: title


text: University of Calgary

text: live

text: Generic

characteristic: NCBI submission package

text: The microbial diversity in tailings pond hydrocarbon- and long-chain fatty acid degrading population was assessed using a barcoded 16S amplicon approach. Sample preparation with tailings pond samples were performed using sodium pyrophosphate buffer in certain samples to isolated large-sclae of DNA. DNA was isolated either using FastDNA Soil kit or Marmur's method without bead-beating. Little is known about the syntrophic organisms that initially attack hydrocarbons under methanogenic conditions, so this assessment will identify the key microbial players involved in methanogenic decomposition of hydrocarbons and related hydrocarbon compounds.

text: hydrocarbon metagenome

text: Time-dependent variation in the anaerobic microbial community structure of an Alberta Oil Sands Tailings Pond as determined by 16S pyrosequencing


text: DOEM 2007

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Gram+

characteristic: Gram Staining

characteristic: Greengenes ID

text: live

text: isolated by Lee et al, pub link http://ijs.sgmjournals.org/cgi/reprint/43/1/41

characteristic: Isolation Comments

text: Generic

characteristic: SRA accession

text: Sporulating

characteristic: Sporulation

text: Yes

characteristic: Type Strain

text: free living

characteristic: biotic relationship

text: Rod-shaped

characteristic: cell shape

characteristic: collection date

text: USA

characteristic: country

text: Keywords: GSC:MIGS:2.1

text: Fresh water, Sediment

characteristic: environment

characteristic: investigation type

text: Frying Pan Springs (thermal spring)

characteristic: isolation site

text: Frying Pan Springs (thermal spring)

characteristic: isolation-source

text: 44.7532 N 110.7227 W

characteristic: lat lon

text: Motile

characteristic: motility

text: Thermoanaerobacterium xylanolyticum LX-11, DSM 7097

characteristic: project name

text: DSM 7097, ATCC 49914

text: anaerobe

text: Thermophile

characteristic: temperature range

text: Thermoanaerobacterium xylanolyticum LX-11, complete genome.

text: type strain of Thermoanaerobacterium xylanolyticum

characteristic: type material


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Brevibacterium sp. di309

characteristic: description

text: Brevibacterium sp. di309

characteristic: organism

characteristic: sample number

characteristic: strain

text: Generic sample from Brevibacterium sp. di309

characteristic: title


text: live

text: Generic

characteristic: SRA accession

text: Phytophthora cinnamomi

text: Phytophthora cinnamomi

text: Generic sample from Phytophthora cinnamomi


default sample for F6PVY2D01

text: Portland State University

text: live

text: Generic

text: hydrothermal vent metagenome

text: default Sample for F6PVY2D01


default Sample for FV57L5Z02

text: Portland State University

text: live

text: Generic

text: hydrothermal vent metagenome

text: default Sample for FV57L5Z02


Colorectal Adenomas default

text: Univeristy of North Carolina at Chapel Hill

text: live

text: Generic

text: human metagenome

text: Colorectal Adenomas default sample


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: analyte type

text: Coriell

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

characteristic: culture collection

text: GRU

text: Homo sapiens

text: male

characteristic: sex

text: Case-Control

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

text: Coriell

characteristic: submitter handle

text: DNA sample from a human male participant in the dbGaP study Genotyping 400 Samples from the NIGMS Human Variation Panels


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

text: Coriell

text: GRU

text: Homo sapiens

text: male

text: Case-Control

text: Genotyping 400 Samples from the NIGMS Human Variation Panels

text: Coriell


text: dbGaP

text: live

text: Generic

characteristic: SRA accession

text: DNA

characteristic: analyte type

text: Coriell

characteristic: biospecimen repository

text: GRU

text: Homo sapiens

characteristic: organism

text: female

text: Case-Control

text: Coriell

text: DNA sample from a human female participant in the dbGaP study Genotyping 400 Samples from the NIGMS Human Variation Panels

characteristic: title


text: No Adenomas

text: live

text: Generic

text: pyrosequencing of bacterial 16s gene from mucosal biopsies of human colon.

text: human metagenome

text: Sample from human metagenome


text: Adenomas

text: live

text: Generic

text: human metagenome

text: Sample from human metagenome


text: dbGaP

text: live

text: Generic

text: RNA

characteristic: biospecimen repository sample id

text: Prostate

characteristic: body site

text: PPC

text: Prostate Cancer

characteristic: histological type

text: Yes

characteristic: is tumor

text: Homo sapiens

text: male

characteristic: sex

text: Prospective Longitudinal Cohort

characteristic: study design

characteristic: study name

text: Tumor RNA sample from Prostate of a human male participant in the dbGaP study Discovery of Non-ETS Gene Fusions using RNA Sequencing


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: RNA

text: Prostate

text: PPC

text: Prostate Cancer

text: Yes

text: Homo sapiens

text: male

text: Prospective Longitudinal Cohort

text: Discovery of Non-ETS Gene Fusions using RNA Sequencing

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle


text: dbGaP

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: RNA

characteristic: analyte type

characteristic: biospecimen repository

text: Prostate

text: PPC

text: benign Prostate

text: Yes

text: Homo sapiens

text: male

text: Prospective Longitudinal Cohort


text: dbGaP

text: live

text: Generic

text: RNA

text: FusionSeq

characteristic: biospecimen repository sample id

text: Prostate

characteristic: body site

text: PPC

text: Prostate Cancer

characteristic: histological type

text: Yes

characteristic: is tumor

text: Homo sapiens

characteristic: organism

text: male

characteristic: sex

text: Prospective Longitudinal Cohort

text: FusionSeq

text: Tumor RNA sample from Prostate of a human male participant in the dbGaP study FusionSeq: Finding Fusions with Paired-End RNA-Seq

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: RNA

text: FusionSeq

text: Prostate

text: PPC

text: Prostate Cancer

text: Yes

text: Homo sapiens

text: male

text: Prospective Longitudinal Cohort

characteristic: study design

text: FusionSeq: Finding Fusions with Paired-End RNA-Seq

characteristic: study name

characteristic: submitted sample id

text: FusionSeq


text: dbGaP

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: RNA

text: FusionSeq

text: Lymphoblastoid cell line

text: PPC

text: Lymphoblastoma

text: Yes

text: Homo sapiens

text: male

text: Prospective Longitudinal Cohort

characteristic: submitted subject id

text: FusionSeq

characteristic: submitter handle

text: Tumor RNA sample from Lymphoblastoid cell line of a human male participant in the dbGaP study FusionSeq: Finding Fusions with Paired-End RNA-Seq


text: dbGaP

text: live

text: Generic

text: RNA

characteristic: analyte type

text: FusionSeq

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Prostate

characteristic: body site

text: PPC

text: Yes

characteristic: is tumor

text: Homo sapiens

characteristic: organism

text: male

text: Prospective Longitudinal Cohort

text: FusionSeq


characteristic: External Id

text: University of Calgary

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: description

text: hydrocarbon metagenome

text: pyrotags

characteristic: title


text: University of Calgary

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: TAR A

text: hydrocarbon metagenome

text: pyrotags


text: University of Calgary

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: TAR C

text: hydrocarbon metagenome

text: pyrotags


text: University of Calgary

text: live

text: Generic

text: Conoco-Phillips produced water - CG1

text: hydrocarbon metagenome

text: pyrotags


text: University of Calgary

text: live

text: Generic

text: Conoco-Phillips produced water - CG7

text: hydrocarbon metagenome

text: pyrotags


text: University of Calgary

text: live

text: Generic

text: Conoco-Phillips produced water - CG8

text: hydrocarbon metagenome

text: pyrotags


text: University of Calgary

text: live

text: Generic

text: Conoco-Phillips produced water - CG13

text: hydrocarbon metagenome

text: pyrotags


text: University of Calgary

text: live

text: Generic

text: Conoco-Phillips produced water - CG16

text: hydrocarbon metagenome

text: pyrotags


text: University of Calgary

text: live

text: Generic

text: Conoco-Phillips produced water - CG18

text: hydrocarbon metagenome

text: pyrotags


text: University of Calgary

text: live

text: Generic

text: Conoco-Phillips produced water - CG19

text: hydrocarbon metagenome

text: pyrotags


text: University of Calgary

text: live

text: Generic

text: Conoco-Phillips produced water - CG22

text: hydrocarbon metagenome

text: pyrotags


text: University of Calgary

text: live

text: Generic

text: Conoco-Phillips produced water - CG23

text: hydrocarbon metagenome

text: pyrotags


text: University of Calgary

text: live

text: Generic

text: CBM exploration core - ARDLEY FM 324M

text: hydrocarbon metagenome

text: pyrotags


text: University of Calgary

text: live

text: Generic

text: CBM exploration core - HORSESHOE CANYON

text: hydrocarbon metagenome

text: pyrotags


text: University of Calgary

text: live

text: Generic

text: CBM exploration core - TRIDENT EXPLORATION CAN 1

text: hydrocarbon metagenome

text: pyrotags


text: University of Calgary

text: live

text: Generic

text: CBM exploration core - TRIDENT EXPLORATION CAN 3

text: hydrocarbon metagenome

text: pyrotags


text: University of Calgary

text: live

text: Generic

text: CBM exploration core - TRIDENT WELL 1560M

text: hydrocarbon metagenome

text: pyrotags


text: University of Calgary

text: live

text: Generic

text: CBM exploration core - TRIDENT WELL 1610M

text: hydrocarbon metagenome

text: pyrotags


text: University of Calgary

text: live

text: Generic

text: CBM exploration core - TRIDENT WELL 1670M

text: hydrocarbon metagenome

text: pyrotags


text: University of Calgary

text: live

text: Generic

text: asphaltene lake - TAR C

text: hydrocarbon metagenome

text: pyrotags


text: University of Calgary

text: live

text: Generic

text: asphaltene lake - TAR D

text: hydrocarbon metagenome

text: pyrotags


text: University of Calgary

text: live

text: Generic

text: asphaltene lake - OIL PATCH

text: hydrocarbon metagenome

text: pyrotags


text: University of Calgary

text: live

text: Generic

text: Conoco-Phillips produced water - CG4

text: hydrocarbon metagenome

text: pyrotags


text: University of Calgary

text: live

text: Generic

text: Conoco-Phillips produced water - CG10

text: hydrocarbon metagenome

text: pyrotags


text: University of Calgary

text: live

text: Generic

text: asphaltene lake - NEW TAR A

text: hydrocarbon metagenome

text: pyrotags


text: University of California - Davis, Drosophila Population Genomics Project

text: live

text: Generic

text: Sub-Saharan African population - Gabon (Franceville). Haploid embryo.

text: Drosophila melanogaster


ycnbwsp

text: live

text: Generic

text: Drosophila melanogaster

text: ycnbwsp


ycnbwsp-HE

text: live

text: Generic

text: Haploid embryo.

text: Drosophila melanogaster

text: ycnbwsp-HE


text: Broad Institute

text: live

text: Generic

text: Plasmodium falciparum 3D7

characteristic: sample name

characteristic: strain

text: Generic sample from Plasmodium falciparum 3D7


PRJNA51823.Soct plat

text: Broad Institute

text: live

text: Generic

text: Schizosaccharomyces octosporus yFS286

text: Soct plat

text: YFS286 ATCC 4206-U

text: Generic sample from Schizosaccharomyces octosporus yFS286


PRJNA51823.Soct log

text: Broad Institute

text: live

text: Generic

text: Schizosaccharomyces octosporus yFS286

text: Soct log

text: YFS286 ATCC 4206-U


PRJNA51823.Soct hs

text: Broad Institute

text: live

text: Generic

text: Schizosaccharomyces octosporus yFS286

text: Soct hs

text: YFS286 ATCC 4206-U


PRJNA51823.Soct gd

text: Broad Institute

text: live

text: Generic

text: Schizosaccharomyces octosporus yFS286

text: Soct gd

text: YFS286 ATCC 4206-U


text: HSR-BSI, Mayo Clinic

text: live

text: Generic

characteristic: cell line

text: Breast cancer cell lines

characteristic: cell type

text: Neg

characteristic: er status

text: Homo sapiens

text: ATCC low passage

characteristic: passages

text: Breast Cancer Cell Line


characteristic: External Id

text: HSR-BSI, Mayo Clinic

text: live

text: Generic

text: Breast cancer cell lines

text: Pos

text: Homo sapiens

characteristic: organism

text: ATCC low passage

text: Breast Cancer Cell Line


text: HSR-BSI, Mayo Clinic

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Non-tumor epithelium cell lines

text: Neg

text: Homo sapiens

text: ATCC low passage

text: Breast Cell Line


text: NIH

characteristic: INSDC last update

text: live

text: Generic

text: anti-Br-dUTP antibody

characteristic: antibody for run-on transcript enrichment

text: Santa Cruz Technology, Inc.

characteristic: antibody vendor

text: V6.5 ESCs

text: Mus musculus

text: embryonic stem cells

text: C57Bl/6(f) x 129/Sv(m)


text: NIH

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: anti-Br-dUTP antibody

text: Santa Cruz Technology, Inc.

text: MEFs isolated from male E13.5 embryo

text: Mus musculus

text: mouse embryonic fibroblasts

text: C57Bl/6(f) x 129/Sv(m)

characteristic: title


text: Hannon, Cold Spring Harbor Laboratory

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Drosophila S2-NP cells

text: Drosophila melanogaster

text: S2-NP cells

text: shRNA-dlg


text: Hannon, Cold Spring Harbor Laboratory

text: live

text: Generic

text: Drosophila S2-NP cells

text: Drosophila melanogaster

text: S2-NP cells

text: shRNA-N


text: Hannon, Cold Spring Harbor Laboratory

text: live

text: Generic

text: Drosophila S2-NP cells

text: Drosophila melanogaster

text: S2-NP cells

text: shRNA-dpp


text: Ronald Evans, Gene Expression Lab, Salk Institute

text: live

text: Generic

text: 10 month old

characteristic: age

text: anti-SMRT

characteristic: antibody

text: male

characteristic: gender

text: Mus musculus

text: wild-type primary bone marrow-derived macrophages

characteristic: strain

text: WT macrophage_SMRT_ChIPSeq


characteristic: External Id

text: live

text: Generic

text: 10 month old

text: anti-NCoR

text: male

text: Mus musculus

text: WT macrophage_NCoR_ChIPSeq


text: live

text: Generic

text: 10 month old

text: anti-SMRT

text: male

text: Mus musculus

characteristic: organism

text: Bcl6 knockout primary bone marrow-derived macrophages

text: Bcl6 KO macrophage_SMRT_ChIPSeq


characteristic: INSDC center name

text: live

text: Generic

text: 10 month old

text: anti-NCoR

text: male

text: Mus musculus

text: Bcl6 KO macrophage_NCoR_ChIPSeq


text: Peng's Lab, Biochemistry and Molecular Biology, Mississippi State University

characteristic: INSDC first public

text: live

text: Generic

characteristic: chip antibody

text: Millipore

characteristic: chip antibody vendor

text: Oryza sativa

text: Rice Endosperm

text: Oryza sativa ssp japonica cv Nipponbare

text: rice immatured seeds 7-8 days after pollination

characteristic: tissue


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Oryza sativa

text: Rice Endosperm

text: Oryza sativa ssp japonica cv Nipponbare

text: input DNA


text: Centro Nacional de Analisis Genomico

text: live

characteristic: INSDC status

text: Generic

text: Aphids were reared on Vicia fabae plant inside regulated cabinets. Biological material was prepared at constant temperature of 18*C at 12h of light to induce the production of sexual morphs. To initiate the experiment, two groups of apterous L3 larvae were placed and plants. This corresponds to generation G0. When adults they were left to lay their offspring: one larva of the 1st stage (L1) was kept per adult per plant. This larva was selected among the 20 first born larvae. This is the generation G1. When these females reached the fourth larval stages (L4-G1), 24 h after their moult from the third stage, the five largest embryos were dissected, frozen in liquid nitrogen and kept at -80*C. Another batch of these females were kept till they reached the adult stage (VA-G1), and the five largest embryos from 24h old female were dissected, frozen in liquid nitrogen and kept at -80*C. Total RNA was extracted from these embryos. In each sample (L4-G1 and VA-G1), a total of about 100 embryos was used for RNA extraction. RNAs were extracted using the SV Total RNA Isolation kit (Promega, Madison, WI, USA). The integrity and quantity of RNAs were verified using a Bioanalyser 2100 (Agilent Tech. Inc., Palo Alto, CA, USA).

characteristic: description

text: Acyrthosiphon pisum

characteristic: title


text: Centro Nacional de Analisis Genomico

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Acyrthosiphon pisum

text: VA


text: Laboratory of James DeCaprio, Mayer 444, Medical Oncology, Dana Farber Cancer Insitute

text: live

text: Generic

text: HeLa cell line

characteristic: cell line

text: Homo sapiens

text: HeLa cell line


text: live

text: Generic

text: HeLa cell line

text: Homo sapiens

text: HeLa cell line


text: live

text: Generic

text: HeLa cell line

text: B-Myb

text: Homo sapiens

text: HeLa cell line


text: Higgs Group, MRC Molecular Haematology Unit, Weatherall Institute of Molecular Medicine, University of Oxford

text: live

text: Generic

characteristic: cell type

text: Wild type

characteristic: genotype

text: Mus musculus

text: Ter119 positive Cells

text: CBA/C57BL/6 mixed

characteristic: strain

text: wild type Murine Ter119+ mRNA-seq


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: erythroid cells (fetal liver culture)

text: Mus musculus

characteristic: organism

text: erythroid cells (fetal liver culture)

text: CBA/C57BL/6 mixed

text: Mutant ΔMCS-P6MCS-R3-/- Murine erythroid cells mRNA-seq


PRJNA51825.Spombe log

text: Broad Institute

characteristic: INSDC first public

text: live

text: Generic

text: Spombe log

characteristic: sample name

text: SPY73 975 h+

text: Generic sample from Schizosaccharomyces pombe strain SPY73 975 h+


PRJNA51825.Spombe hs

text: Broad Institute

characteristic: INSDC last update

text: live

text: Generic

text: Schizosaccharomyces pombe strain SPY73 975 h+

text: Spombe hs

text: SPY73 975 h+


PRJNA51825.Spombe gd

text: Broad Institute

characteristic: INSDC secondary accession

text: live

text: Generic

text: Spombe gd

text: SPY73 975 h+


PRJNA51825.Spombe plat

text: Broad Institute

text: live

characteristic: INSDC status

text: Generic

text: Spombe plat

text: SPY73 975 h+


text: Baylor College of Medicine

text: live

text: Generic

text: sperm

text: Atlantic Ocean: off the coast of Beaufort, North Carolina, USA

characteristic: country

text: Lytechinus variegatus

characteristic: description

text: Lvar 01

characteristic: isolate

text: Lytechinus variegatus

text: male

characteristic: sex

text: Lytechinus variegatus


text: University of California, Los Angeles

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Abcam

characteristic: antibody manufacturer

text: Homo sapiens

characteristic: passages

text: H1 human embryonic stem cells

characteristic: title


characteristic: External Id

text: University of California, Los Angeles

characteristic: INSDC center name

text: live

text: Generic

characteristic: cell line

text: Homo sapiens

characteristic: organism

text: H1 human embryonic stem cells

text: H1_input DNA


text: University of California, Los Angeles

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Abcam

text: Homo sapiens

text: IMR90 human lung fibroblasts


text: University of California, Los Angeles

text: live

characteristic: INSDC status

text: Generic

text: Homo sapiens

text: IMR90 human lung fibroblasts

text: IMR90_input DNA


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: analyte type

text: RespiratoryChainDisease

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Lymphoblastoid cell line

characteristic: body site

text: GRU

text: SNP Genotypes (Array)

characteristic: molecular data type

text: Homo sapiens

text: female

text: Case-Control

characteristic: study design

text: Mitochondrial Diseases

characteristic: study disease

characteristic: study name

text: Yes

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

text: RespiratoryChainDisease

characteristic: submitter handle

text: DNA sample from Lymphoblastoid cell line of a human female participant in the dbGaP study MitoExome Sequencing of Mitochondrial OXPHOS Diseases (MGH)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

text: RespiratoryChainDisease

text: Lymphoblastoid cell line

text: GRU

text: SNP Genotypes (Array)

text: Homo sapiens

characteristic: organism

text: male

characteristic: sex

text: Case-Control

text: Mitochondrial Diseases

text: Yes

text: RespiratoryChainDisease

text: DNA sample from Lymphoblastoid cell line of a human male participant in the dbGaP study MitoExome Sequencing of Mitochondrial OXPHOS Diseases (MGH)

characteristic: title


text: dbGaP

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: DNA

characteristic: analyte type

text: RespiratoryChainDisease

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Lymphoblastoid cell line

characteristic: body site

text: GRU

text: SNP Genotypes (Array)

text: Homo sapiens

text: female

text: Case-Control

text: Mitochondrial Diseases

text: MitoExome Sequencing of Mitochondrial OXPHOS Diseases (MGH)

text: Yes

text: RespiratoryChainDisease


text: dbGaP

text: live

text: Generic

text: DNA

text: RespiratoryChainDisease

text: Lymphoblastoid cell line

text: GRU

text: SNP Genotypes (Array)

characteristic: molecular data type

text: Homo sapiens

text: male

text: Case-Control

characteristic: study design

text: Mitochondrial Diseases

characteristic: study disease

characteristic: study name

text: Yes

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

text: RespiratoryChainDisease

characteristic: submitter handle


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

text: RespiratoryChainDisease

text: Fresh blood

text: GRU

text: SNP Genotypes (Array)

text: Homo sapiens

characteristic: organism

text: male

characteristic: sex

text: Case-Control

text: Mitochondrial Diseases

text: Yes

text: RespiratoryChainDisease

text: DNA sample from Fresh blood of a human male participant in the dbGaP study MitoExome Sequencing of Mitochondrial OXPHOS Diseases (MGH)

characteristic: title


text: dbGaP

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: DNA

characteristic: analyte type

text: RespiratoryChainDisease

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Fresh blood

characteristic: body site

text: GRU

text: SNP Genotypes (Array)

text: Homo sapiens

text: female

text: Case-Control

text: Mitochondrial Diseases

text: Yes

text: RespiratoryChainDisease

text: DNA sample from Fresh blood of a human female participant in the dbGaP study MitoExome Sequencing of Mitochondrial OXPHOS Diseases (MGH)


text: dbGaP

text: live

text: Generic

text: DNA

text: RespiratoryChainDisease

text: Fibroblast

text: GRU

text: SNP Genotypes (Array)

characteristic: molecular data type

text: Homo sapiens

text: female

text: Case-Control

characteristic: study design

text: Mitochondrial Diseases

characteristic: study disease

characteristic: study name

text: Yes

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

text: RespiratoryChainDisease

characteristic: submitter handle

text: DNA sample from Fibroblast of a human female participant in the dbGaP study MitoExome Sequencing of Mitochondrial OXPHOS Diseases (MGH)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

text: RespiratoryChainDisease

text: GRU

text: SNP Genotypes (Array)

text: Homo sapiens

characteristic: organism

text: female

characteristic: sex

text: Case-Control

text: Mitochondrial Diseases

text: Yes

text: RespiratoryChainDisease

text: DNA sample from a human female participant in the dbGaP study MitoExome Sequencing of Mitochondrial OXPHOS Diseases (MGH)

characteristic: title


text: dbGaP

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: DNA

characteristic: analyte type

text: RespiratoryChainDisease

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: GRU

text: SNP Genotypes (Array)

text: Homo sapiens

text: male

text: Case-Control

text: Mitochondrial Diseases

text: Yes

text: RespiratoryChainDisease

text: DNA sample from a human male participant in the dbGaP study MitoExome Sequencing of Mitochondrial OXPHOS Diseases (MGH)


text: dbGaP

text: live

text: Generic

text: DNA

text: RespiratoryChainDisease

text: Fibroblast

characteristic: body site

text: GRU

text: SNP Genotypes (Array)

characteristic: molecular data type

text: Homo sapiens

text: male

text: Case-Control

characteristic: study design

text: Mitochondrial Diseases

characteristic: study disease

characteristic: study name

text: Yes

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

text: RespiratoryChainDisease

text: DNA sample from Fibroblast of a human male participant in the dbGaP study MitoExome Sequencing of Mitochondrial OXPHOS Diseases (MGH)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

text: RespiratoryChainDisease

text: Brain tissue

text: GRU

text: SNP Genotypes (Array)

text: Homo sapiens

characteristic: organism

text: female

characteristic: sex

text: Case-Control

text: Mitochondrial Diseases

text: Yes

text: RespiratoryChainDisease

characteristic: submitter handle

text: DNA sample from Brain tissue of a human female participant in the dbGaP study MitoExome Sequencing of Mitochondrial OXPHOS Diseases (MGH)


text: Gene Expression Omnibus

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: batch

text: James Thompson Laboratory

characteristic: biomaterial provider

text: Cell Line

characteristic: biomaterial type

text: Human embryonic stem cells received from the James Thompson laboratory. Cells are from the H1 line.

characteristic: description

characteristic: line

text: Embryonic Stem Cell

characteristic: lineage

text: mTeSER

characteristic: medium

text: genomic DNA

characteristic: molecule

text: Homo sapiens

characteristic: passage

text: male

text: Generic sample from Homo sapiens

characteristic: title


characteristic: External Id

text: Gene Expression Omnibus

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: James Thompson Laboratory

text: Cell Line

text: Human embryonic stem cells received from the James Thompson laboratory. Cells are from the H9 line.

text: Embryonic Stem Cell

text: mTeSER

text: genomic DNA

text: Homo sapiens

characteristic: organism

text: Between 30 and 50

text: female

text: Generic sample from Homo sapiens


text: UT Austin

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Clone isolated from population Ara-3 of the Lenski long-term evolution experiment at 33,000 generations.

text: Escherichia coli B str. REL606

characteristic: strain


ESP control

text: Massachusetts Institute of Technology

text: live

text: Generic

text: To evaluate the effect of preservation methodology on resultant metatranscriptomic profiles, an ESP-collected and preserved sample was compared against a sample collected by traditional vacuum filtration. Native water was collected from the Santa Cruz (California) municipal wharf with one aliquot dedicated for ESP processing and a second for collection using traditional laboratory vacuum filtration. The material collected using the latter method was immediately flash frozen in liquid nitrogen, and stored at -80 *C until extraction. The ESP-processed aliquot of that same sample remained on the instrument during a field test of the ESP at MBARI’s station M0 (36.83 *N, 121.90 *W) from April 6, 2009 to April 29, 2009. Following recovery of the instrument, both ESP- and vacuum-collected samples were extracted and used for metatranscriptomic analysis.

characteristic: description

text: marine metagenome

text: ESP preservation control; Santa Cruz municipal wharf surface water


text: IRB Barcelona

text: live

text: Generic

characteristic: antibody catalog number

text: Abcam

characteristic: antibody vendor

characteristic: chip antibody

text: third instar larvae

characteristic: developmental stage

text: wild type

characteristic: genotype

text: Drosophila melanogaster

characteristic: sequencing date

text: wing imaginal discs, wild type, H3K4me3 ChIP

text: wing imaginal discs

characteristic: tissue


characteristic: External Id

text: IRB Barcelona

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

text: third instar larvae

text: wild type

text: Drosophila melanogaster

text: wing imaginal discs, wild type, input

text: wing imaginal discs

characteristic: title


text: IRB Barcelona

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Abcam

text: third instar larvae

text: LID RNAi

text: Drosophila melanogaster

characteristic: organism

text: wing imaginal discs, LID RNAi knock-down, H3K4me3 ChIP

text: wing imaginal discs


text: IRB Barcelona

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: third instar larvae

text: LID RNAi

text: Drosophila melanogaster

text: wing imaginal discs, LID RNAi knock-down, input

text: wing imaginal discs


text: IRB Barcelona

text: live

text: Generic

text: custom-made

characteristic: antibody vendor

text: lid

text: third instar larvae

text: wild type

text: Drosophila melanogaster

text: wing imaginal discs, wild type, LID ChIP

text: wing imaginal discs

text: lid


Long term control

text: University of Texas at Austin

text: live

text: Generic

text: RNA extracted from 5-d-old larvae of Acropora millepora grown at standard culturing temperatures (28*C).

characteristic: description

text: Acropora millepora

text: Larvae cultured at standard temperature


Long term elevated temperature

text: University of Texas at Austin

text: live

text: Generic

text: RNA extracted from 5-d-old larvae of Acropora millepora grown at elevated temperatures (32*C).

text: Acropora millepora

text: Larvae cultured at elevated temperature


Short term control

text: University of Texas at Austin

text: live

text: Generic

text: RNA extracted from 5-d-old larvae of Acropora millepora sampled along with the short term treatments, to serve as a control for the effects of handling.

text: Acropora millepora

text: Handling control for short term treatments


Settlement cue exposure (CCA)

text: University of Texas at Austin

text: live

text: Generic

text: RNA extracted from 5-d-old larvae of Acropora millepora exposed to natural settlement cue, crustose coralline algae (CCA) for 4 hr.

text: Acropora millepora

text: Larvae exposed to natural settlement cue (CCA)


name: Metamorphosis inducer exposure (GLW-amide)

text: University of Texas at Austin

text: live

text: Generic

text: RNA extracted from 5-d-old larvae of Acropora millepora exposed to a synthetic metamorphosis inducer exposure (GLW-amide) for 4 hr.

text: Acropora millepora

text: Larvae exposued to a synthetic inducer of metamorphosis, GLW-amide


Short term elevated temperature

text: University of Texas at Austin

text: live

text: Generic

text: RNA extracted from 5-d-old larvae of Acropora millepora exposed to elevated temperatures (32*C) for a short duration treatment (4 hr).

text: Acropora millepora

text: Larvae exposed to short-duration elevated temperature treatment


Long term control, duplicate

text: University of Texas at Austin

text: live

text: Generic

text: RNA extracted from 5-d-old larvae of Acropora millepora grown at standard culturing temperatures (28*C). Larvae independently sampled form the same population of larvae as in sample SRS167153.

text: Acropora millepora

text: Larvae cultured at standard temperature (duplicate sample)


Genomic DNA sample

text: University of Texas at Austin

text: live

text: Generic

text: This hybrid individual was produced from a cross between spp. Candida (Taxon ID 493266) and spp. Collina (493267). Parents were collected from the Front Range of Colorado.

text: Ipomopsis aggregata

text: Genomic DNA from a single hybrid individual


text: University of California - Davis, Drosophila Population Genomics Project

text: live

text: Generic

text: Drosophila melanogaster


text: UT Austin

text: live

text: Generic

text: Clone isolated from population Ara-3 of the Lenski long-term evolution experiment at 2,000 generations.

text: Escherichia coli B str. REL606

characteristic: strain


text: UT Austin

text: live

text: Generic

text: Clone isolated from population Ara-3 of the Lenski long-term evolution experiment at 40,000 generations.

text: Escherichia coli B str. REL606


text: UT Austin

text: live

text: Generic

text: Clone isolated from population Ara-3 of the Lenski long-term evolution experiment at 30,000 generations.

text: Escherichia coli B str. REL606


text: UT Austin

text: live

text: Generic

text: Clone isolated from population Ara-3 of the Lenski long-term evolution experiment at 32,000 generations.

text: Escherichia coli B str. REL606


text: UT Austin

text: live

text: Generic

text: Clone isolated from population Ara-3 of the Lenski long-term evolution experiment at 34,000 generations.

text: Escherichia coli B str. REL606


text: UT Austin

text: live

text: Generic

text: Clone isolated from population Ara-3 of the Lenski long-term evolution experiment at 36,000 generations.

text: Escherichia coli B str. REL606


text: UT Austin

text: live

text: Generic

text: Clone isolated from population Ara-3 of the Lenski long-term evolution experiment at 38,000 generations.

text: Escherichia coli B str. REL606


text: UT Austin

text: live

text: Generic

text: Clone isolated from population Ara-3 of the Lenski long-term evolution experiment at 32,500 generations.

text: Escherichia coli B str. REL606


text: UT Austin

text: live

text: Generic

text: Clone isolated from population Ara-3 of the Lenski long-term evolution experiment at 31,500 generations.

text: Escherichia coli B str. REL606


Khalas Female

text: Weill Cornell Medical College in Qatar

text: live

text: Generic

text: Phoenix dactylifera

text: Khalas Female Sequenced and Assembled in Publication


Deglet Noor Female

text: Weill Cornell Medical College in Qatar

text: live

text: Generic

text: PI 4611-RIV2154 in USDA date palm collection

text: Phoenix dactylifera

text: Deglet Noor Female PI 4611- RIV2154


text: Weill Cornell Medical College in Qatar

text: live

text: Generic

text: PI4611-PL2154 in USDA collection

text: Phoenix dactylifera

text: Deglet Noor Backcrossed 5gen Male


Mdjl

text: Weill Cornell Medical College in Qatar

text: live

text: Generic

text: RPHO1-RIV2134 in USDA collection

text: Phoenix dactylifera

text: Medjool Female


Medjool BC4

text: Weill Cornell Medical College in Qatar

text: live

text: Generic

text: PI555438-RIV2219 in USDA collection

text: Phoenix dactylifera

text: Medjool Backcross 4gen Male


KhlsFx Female

text: Weill Cornell Medical College in Qatar

text: live

text: Generic

text: PI555437-PL2208 in USDA collection

text: Phoenix dactylifera

text: Khalas Female X KhlsF1 Female


KhlsBC2 Female

text: Weill Cornell Medical College in Qatar

text: live

text: Generic

text: PI555423-PL2200 in USDA collection

text: Phoenix dactylifera

text: Khalas Backcross 2gen Female


Khalt Male

text: Weill Cornell Medical College in Qatar

text: live

text: Generic

text: Khalt is a mixed pedigree Male tree collected in Qatar

text: Phoenix dactylifera

text: Khalt Male - mixed male from Qatar


AlrijalFemale

text: Weill Cornell Medical College in Qatar

text: live

text: Generic

text: Alrijal Female is the 'daughter' of a preferred pollen producing male date palm collected in Qatar

text: Phoenix dactylifera

text: Alrijal Female


text: UT Austin

text: live

text: Generic

text: Clone isolated from population Ara-3 of the Lenski long-term evolution experiment at 5,000 generations.

text: Escherichia coli B str. REL606


text: UT Austin

text: live

text: Generic

text: Clone isolated from population Ara-3 of the Lenski long-term evolution experiment at 10,000 generations.

text: Escherichia coli B str. REL606


text: UT Austin

text: live

text: Generic

text: Clone isolated from population Ara-3 of the Lenski long-term evolution experiment at 15,000 generations.

text: Escherichia coli B str. REL606


text: UT Austin

text: live

text: Generic

text: Clone isolated from population Ara-3 of the Lenski long-term evolution experiment at 20,000 generations.

text: Escherichia coli B str. REL606


text: UT Austin

text: live

text: Generic

text: Clone isolated from population Ara-3 of the Lenski long-term evolution experiment at 25,000 generations.

text: Escherichia coli B str. REL606


Apis florea

text: University of Illinois

text: live

text: Generic

text: Apis florea

text: Apis florea ESTs


Bombus impatiens

text: University of Illinois

text: live

text: Generic

text: Bombus impatiens

text: Bombus impatiens ESTs from GS-FLX


Bombus psithyrus insularis

text: University of Illinois

text: live

text: Generic

text: Bombus insularis

text: Bombus psithyrus inslaris


Bombus terrestris

text: University of Illinois

text: live

text: Generic

text: Bombus terrestris

text: Bombus terrestris


Centris flavifrons

text: University of Illinois

text: live

text: Generic

text: Centris flavifrons

text: Centris flavifrons mRNA


Eulaema nigrita ESTs

text: University of Illinois

text: live

text: Generic

text: Eulaema nigrita

text: Eulaema nigrita ESTs from GS-FLX sequencing


Euglossa cordata

text: University of Illinois

text: live

text: Generic

text: Euglossa cordata

text: Euglossa cordata


Exoneura robusta

text: University of Illinois

text: live

text: Generic

text: Exoneura robusta

text: Exoneura robusta


Frieseomelitta varia

text: University of Illinois

text: live

text: Generic

text: Frieseomelitta varia

text: Frieseomelitta varia


Megachile rotundata

text: University of Illinois

text: live

text: Generic

text: Megachile rotundata

text: Megachile rotundata


Megalopta genalis

text: University of Illinois

text: live

text: Generic

text: Megalopta genalis

text: Megalopta genalis


Melipona quadrifasciata

text: University of Illinois

text: live

text: Generic

text: Melipona quadrifasciata

text: Melipona quadrifasciata


text: University of California - Davis, Drosophila Population Genomics Project

text: live

text: Generic

text: Drosophila melanogaster


text: live

text: Generic

text: Sub-Saharan African population - Uganda (Namulonge). 3rd chromosome extraction.

text: Drosophila melanogaster


text: live

text: Generic

text: Sub-Saharan African population - Uganda (Namulonge). 3rd chromosome extractions.

text: Drosophila melanogaster


name: Whole genome sequencing for N. tetrasperma P4492_a

text: Uppsala University

text: live

text: Generic

text: Neurospora tetrasperma


name: Whole genome sequencing for N. tetrasperma P4492A

text: Uppsala University

text: live

text: Generic

text: Neurospora tetrasperma


Heliothis virescens Mixed

text: Agricultural Research Service, US Department of Agriculture

text: live

text: Generic

text: A tobbaco budworm colony (ARS) maintained at the USDA-ARS, Southern insect Management Research Unit, Stoneville, MS was used to extract total RNA from all life stages (from egg to adult). Total RNA was also extracted from 30 adult male and female moths from field locations in Washington County, MS. An RNA pool made by mixing equal amount of RNA from all extractions. Standard RNA-Seq protocol was used to obtain 36 nucleotide sequence reads.

text: Heliothis virescens

text: Transcriptome of Heliothis virescens


text: small RNA lab, Environmental Biology, Centro de Investigaciones Biológicas

text: live

text: Generic

text: Growing

characteristic: developmental stage

text: Olea europaea

text: Growing lateral buds, Picual x Arbequina olive variety

text: Lateral buds

text: Endogenous sRNAs from growing buds of O. europaea (PicualxArbequina genetic cross)_growing (juvenile) stage


text: live

text: Generic

text: Dormant

text: Olea europaea

text: Dormant lateral buds, Picual x Arbequina olive variety

text: Lateral buds

text: Endogenous sRNAs from dormant buds of O. europaea (PicualxArbequina genetic cross)_dormant (adult) stage


Alfalfa cultivar CHilean

text: J. Craig Venter Institute

text: live

text: Generic

text: Medicago sativa

text: Medicago sativa subsp. sativa var. 'Chilean'


Chickpea

text: J. Craig Venter Institute

text: live

text: Generic

text: Cicer arietinum

text: 454 of Cicer arietinum/Chickpea


Pigeonpea

text: J. Craig Venter Institute

text: live

text: Generic

text: Cajanus cajan

text: 454 of Cajanus cajan/pigeonpea


name: Pooled tomato fruit surface and water samples 16S amplicons

text: Institute for Genome Sciences - UMB

text: live

text: Generic

text: food metagenome