text: live

text: Generic

text: Maize Full length cDNA library (3530 library) created by Invitrogen from multiple tissues; Organ: silks, husks, ears, pollen, shoot tips, leaf, root tips, whole seed, embryo. This is a Gateway compatible vector, permitting clone movement to new vector backbones for expression in diverse host cells using recombination rather than restriction enzymes. poly(A)+ mRNA was prepared by Invitrogen, and equimolar amounts of RNA from each of the 12 tissue samples were mixed together for selection of mRNA with a 5' cap. After synthesis of cDNA, a normalization step was conducted against the mixture of RNA sources. Tissues prepared: 1. just emerging silks; 2. inner husks from ears of sample #1; 3. 20 dap aleurone; 4. immature tassels, stages from 1-2 mm to 1-2 cm; 5. 2 mm to 2 cm ears; 6. pollen; 7. 1 cm vegetative shoot tips from 15 day old seedlings; all leaves with an expanded or partially expanded sheath were removed; 8. mature leaf tissue; 9. 0.5 cm long root tips from 15 day old seedlings; 10. 10 dap whole seed; 11. 12 dap endosperm and embryo; 12. 17 dap endosperm and embryo. All of the sequenced clones in Maize Full-length cDNA Project will be archived at the University of Arizona. Clones, high density filters and amplified library can be ordered from the University of Arizona (http://www.genome.arizona.edu/orders/).

text: varies by tissue

characteristic: dev-stage

text: DH10B T1 phage resistant

text: Zea mays

text: EcoRV

text: NotI

text: mixed (silks, husks, ears, pollen, shoot tips, leaf, root tips, whole seed, embryo)

text: Plasmid

text: pCMV-SPORT 6.1


status: PUBLIC

characteristic: External Id

text: University of Georgia, Center for Applied Genetic Technologies

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Arizona Common

tag: attribute

characteristic: cultivar

text: Hypomethylated (PstI-digested) genomic clones

characteristic: description

text: Cynodon dactylon

characteristic: organism

text: pCD

characteristic: title

text: Plasmid

text: pBluescript

characteristic: vector


text: Universidade Federal do Rio Grande do Sul

text: live

text: Generic

text: Partial sequence from 2.5 kb fragment

text: Drosophila willistoni

text: male

characteristic: sex

characteristic: strain

text: strain 17A2 male genomic DNA cleaved with AluI


text: live

text: Generic

text: Partial sequence from 5 kb fragment

text: Drosophila willistoni

text: male

text: strain 17A2 male genomic DNA cleaved with HaeIII


text: live

text: Generic

text: Partial sequence from 3.5 kb fragment

text: Drosophila willistoni

text: female

text: strain WIP-4 female genomic DNA cleaved with AluI


text: live

text: Generic

text: Partial sequence from 5 kb fragment

text: Drosophila willistoni

text: male

text: strain WIP-4 male genomic DNA cleaved with HaeIII


text: University of Pisa

text: live

text: Generic

text: Echinacea purpurea

text: Echinacea purpurea RAPD marker


text: Nara Institute of Science and Technology (NAIST)

text: live

text: Generic

text: Embryonic Stem Cell

characteristic: cell type

text: Mus musculus

text: male

text: 129 Sv

text: NAIST Gene Trap Library Tc1-UPAT-3ic


text: live

text: Generic

text: Embryonic Stem Cell

text: Mus musculus

text: male

text: C57BL/6J x 129/SvJae

text: NAIST Gene Trap Library v6.4-UPAT-noic

text: pUPAT-noic


text: live

text: Generic

text: Embryonic Stem Cell

text: Mus musculus

text: male

text: C57BL/6J x 129/SvJae

text: NAIST Gene Trap Library v6.4-UPAT-egfp3ic


text: University of Pennsylvania School of Medicine

text: live

text: Generic

text: embryo fibroblast

text: Sequences cloned using TOPO vectors.

text: Gallus gallus

text: Chicken Integration Site Library


text: live

text: Generic

text: Cynodon dactylon

text: Cynodon dactylon T574

text: Plasmid

text: pBluescript


text: live

text: Generic

text: Embryonic Stem Cell

text: Mus musculus

text: Male

text: 129 OLA

text: Sanger Institute Gene Trap Library pGT1lxf


text: University of Milan

text: live

text: Generic

text: Homo sapiens

text: Homo sapiens DNA (Bodega B)


text: Keio University, School of Medicine

text: live

text: Generic

text: Oryzias latipes

text: Medaka HdrR BAC library


text: Keio University, School of Medicine

text: live

text: Generic

text: Oryzias latipes

text: Medaka HNI BAC library


text: University of Wisconsin-Madison

text: live

text: Generic

text: Tobin

text: Comparison of RFLP and RAPD markers to estimate genetic relationships within and among cruciferous species Thormann et al. (1994) Theoretical and Applied Genetics 88: 973-980.

text: Brassica rapa

text: Leaf tissue

characteristic: tissue-type

text: Brassica rapa TG library

text: Plasmid


text: University of Wisconsin-Madison

text: live

text: Generic

text: Westar

text: Brassica napus

text: Leaf tissue

text: Brassica napus WG library

text: Plasmid


text: Max-Planck-Institut fuer Zuechtungsforschung

text: live

text: Generic

text: Chiifu

text: Brassica rapa subsp. pekinensis

text: KBrH, Brassica rapa HindIII BAC library GF-SCF-1002


text: Colorado State University

text: live

text: Generic

text: Danko

text: Secale cereale

text: Secale cereale cv. Danko


text: Colorado State University

text: live

text: Generic

text: Polykrossnaja K

text: Secale cereale

text: Secale cereale cv. Polykrossnaja K


text: Colorado State University

text: live

text: Generic

text: Gamtoos

text: Triticum aestivum

text: Triticum aestivum cv. Gamtoos


text: Stanford University

text: live

text: Generic

text: mixed background W23/A188/B73/K55

text: RescueMu is a 4.9 kb, modified maize Mu transposon designed to allow plasmid rescue from total genomic DNA. Mu elements insert preferentially into transcription units. For more information on RescueMu, go to the web site 'http://www.mutransposon.org/project/RescueMu/'. Grid J was grown at UCSD in 2000. DNA was extracted from leaf strips, double digested using BamHI and BglII, and ligated to form circular plasmids. DH10B cells were transformed and then screened on LB plates with ampicillin.

text: adult

characteristic: dev-stage

characteristic: lab-host

text: leaf

characteristic: organ

text: Zea mays

text: BamHI

text: BglII

text: leaf

text: 4011 - RescueMu Grid J

text: plasmid

text: RescueMu (engineered from pBlueScript backbone)


characteristic: External Id

text: Stanford University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: mixed background W23/A188/B73/K55

text: RescueMu is a 4.9 kb, modified maize Mu transposon designed to allow plasmid rescue from total genomic DNA. Mu elements insert preferentially into transcription units. For more information on RescueMu, go to the web site 'http://www.mutransposon.org/project/RescueMu/'. Grid BB was grown at UC Berkeley in 2001. DNA was extracted from leaf strips, double digested using BamHI and BglII, and ligated to form circular plasmids. DH10B cells were transformed and then screened on LB plates with ampicillin.

text: adult

text: leaf

text: Zea mays

text: BamHI

text: BglII

text: leaf

text: 4012 - RescueMu Grid BB

text: plasmid


text: Stanford University

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: mixed background W23/A188/B73/K55

text: RescueMu is a 4.9 kb, modified maize Mu transposon designed to allow plasmid rescue from total genomic DNA. Mu elements insert preferentially into transcription units. For more information on RescueMu, go to the web site 'http://www.mutransposon.org/project/RescueMu/'. Grid O was grown at Stanford in 2001. DNA was extracted from leaf strips, double digested using BamHI and BglII, and ligated to form circular plasmids. DH10B cells were transformed and then screened on LB plates with ampicillin.

text: adult

text: leaf

text: Zea mays

text: BamHI

text: BglII

text: leaf

text: 4013 - RescueMu Grid O

text: plasmid


text: Stanford University

text: live

text: Generic

characteristic: NCBI submission package

text: mixed background W23/A188/B73/K55

characteristic: cultivar

text: RescueMu is a 4.9 kb, modified maize Mu transposon designed to allow plasmid rescue from total genomic DNA. Mu elements insert preferentially into transcription units. For more information on RescueMu, go to the web site 'http://www.mutransposon.org/project/RescueMu/'. Grid X was grown at UCSD in 2003. DNA was extracted from leaf strips, double digested using BamHI and BglII, and ligated to form circular plasmids. DH10B cells were transformed and then screened on LB plates with ampicillin.

characteristic: description

text: adult

text: leaf

text: Zea mays

text: BamHI

text: BglII

text: leaf

text: 4018 - RescueMu Grid X

text: plasmid


text: Stanford University

text: live

text: Generic

text: mixed background W23/A188/B73/K55

text: RescueMu is a 4.9 kb, modified maize Mu transposon designed to allow plasmid rescue from total genomic DNA. Mu elements insert preferentially into transcription units. For more information on RescueMu, go to the web site 'http://www.mutransposon.org/project/RescueMu/'. Grid V was grown at University of Arizona in 2003. DNA was extracted from leaf strips, double digested using BamHI and BglII, and ligated to form circular plasmids. DH10B cells were transformed and then screened on LB plates with ampicillin.

text: adult

text: leaf

text: Zea mays

characteristic: organism

text: BamHI

text: BglII

text: leaf

text: 4021 - RescueMu Grid V

characteristic: title

text: plasmid

characteristic: vector


text: Nanjing Agricultural University

text: live

text: Generic

text: Streptococcus suis

text: Streptococcus suis DNA (Tian Y)


text: Genoscope - Centre National de Sequencage

text: live

text: Generic

text: Saccharomyces uvarum

text: CLIB 533

characteristic: strain


text: live

text: Generic

text: Kluyveromyces marxianus

text: CBS 712


text: live

text: Generic

text: Debaryomyces hansenii var. hansenii

text: CBS 767


text: The Institute of Physical and Chemical Research (RIKEN)

text: live

text: Generic

text: Branchiostoma floridae

text: EcoRI

text: EcoRI

text: male

characteristic: sex

text: sperm

characteristic: tissue-type

text: CHORI0302 Amphioxus genomic BAC library


text: TIGR

text: live

text: Generic

text: Tapidor

text: Genomic BAC library. A TAC library consisting of 73,728 clones, constructed using pYLTAC7 as vector. This library has an average insert size of 85kb.

text: Brassica napus

text: BamHI

text: Brassica napus BAC library JBnY


text: TIGR

text: live

text: Generic

text: Chiifu

text: Genomic BAC library. A BAC library consisting of 56,483 clones, constructed using pCUGIBACI as vector. This library has an average insert size of 115kb and provides 11x coverage of the Brassica rapa genome. It was made at Chungnam National University, South Korea using leaf DNA partially digested with HindIII.

text: Brassica rapa

text: HindIII

text: Brassica rapa BAC library KBrH


text: The University of Arizona

text: live

text: Generic

text: USA

text: adult

characteristic: dev-stage

text: DH 10B

characteristic: lab-host

text: Ginglymostoma cirratum

text: HindIII

text: HindIII

text: male red blood cells

text: Plasmid


characteristic: External Id

text: Texas A&M University

text: live

text: Generic

text: DNA from BAC clones was digested with EcoRI and XhoI, cloned into pBluescript II SK+ and sequenced with forward or reverse primer

text: Sorghum bicolor

text: EcoRI

text: XhoI

text: Subclones from Sorghum bicolor BAC clones

text: pBluescript II SK+


text: Institute of Oceanology, Chinese Academy of Sciences

characteristic: INSDC center name

text: live

text: Generic

text: PCR product with degenerate primers

text: Gracilaria textorii

text: hermaphrodite

text: Gracilaria textorii LINE retrotransposon DNA, endonuclease region of GRLN1


characteristic: INSDC first public

text: live

text: Generic

text: PCR product with degenerate primers

text: Gracilaria confervoides

text: hermaphrodite

text: G.conferuoides (L.) Greville LINE retrotransposon DNA, endonuclease region of GRLN3


characteristic: INSDC last update

text: live

text: Generic

text: PCR product with degenerate primers

text: Gracilaria confervoides

text: hermaphrodite

text: G.conferuoides (L.) Greville LINE retrotransposon DNA, endonuclease region of GRLN4


text: South China Botanical Garden

text: live

characteristic: INSDC status

text: Generic

text: Canna x generalis

text: Canna generalis DNA


text: The Center for Plant Genomics, Plant Science Institute

text: live

text: Generic

characteristic: NCBI submission model

text: Genomic DNA was isolated from immature ears of the maize inbred line B73 using a 1x CTAB procedure method (Saghai-Maroof et al. 1984). Genomic DNA was digested with MboI (New England Biolab) and then analyzed using 1.5% agarose gel electrophoresis. DNA fractions with sizes of 200~800 bp were purified using a QIAGEN gel extraction kit (Cat. No. 28704). pHIS6 plasmid DNA isolated from DM1 strain (Invitrogen, Cat. No. 18268-011) was digested with BamHI and dephosphorylated with CIAP (Promega) and then gel purified. Ligations were conducted with an estimated mole ratio of MboI-digested genomic DNA to BamHI-digested pHIS6 vector of 5:1. The ligation products were transformed into BL21(DE3) competent cells (Stratagene, Cat. No. 200131) using BioRad Gene Pulse II. In situ colony immunoblot analyses were performed according to the QIAexpress Detection and Assay Handbook (QIAGEN). The positive clones were picked and then sequenced. A total of 358 GSSs containing uninterrupted ORFs from this library were submitted. Another batch of 39 GSSs that do not contain uninterrupted ORFs (false positives) were submitted separately.

text: Zea mays

text: BamHI

text: PstI

text: immature ear

text: Plasmid


text: live

text: Generic

characteristic: NCBI submission package

text: Genomic DNA was isolated from immature ears of the maize inbred line B73 using a 1x CTAB procedure method (Saghai-Maroof et al. 1984). Genomic DNA was digested with MboI (New England Biolab) and then analyzed using 1.5% agarose gel electrophoresis. DNA fractions with sizes of 200~800 bp were purified using a QIAGEN gel extraction kit (Cat. No. 28704). pHIS6 plasmid DNA isolated from DM1 strain (Invitrogen, Cat. No. 18268-011) was digested with BamHI and dephosphorylated with CIAP (Promega) and then gel purified. Ligations were conducted with an estimated mole ratio of MboI-digested genomic DNA to BamHI-digested pHIS6 vector of 5:1. The ligation products were transformed into BL21(DE3) competent cells (Stratagene, Cat. No. 200131) using BioRad Gene Pulse II. In situ colony immunoblot analyses were performed according to the QIAexpress Detection and Assay Handbook (QIAGEN). The positive clones were picked and then sequenced. A total of 778 GSSs containing uninterrupted ORFs from this library (MORFpHIS6) were submitted. Another batch of 112 GSSs that do not contain uninterrupted ORFs (false positives) were submitted separately.

text: Zea mays

text: BamHI

text: PstI

text: immature ear

text: Plasmid


text: University of Georgia, Center for Applied Genetic Technologies

text: live

text: Generic

text: Gallus gallus

text: Ggal

text: Plasmid

text: pBluescript


text: live

text: Generic

text: Homo sapiens

text: Hsap

text: Plasmid

text: pBluescript


text: live

text: Generic

text: Oryza sativa

text: Osat

text: Plasmid

text: pBluescript


text: University of New Hampshire

text: live

text: Generic

text: Oreochromis niloticus


text: Shandong Peanut Research Institute

text: live

text: Generic

text: The peanut genomic DNA was extracted using a modified CTAB method, digested with 3 restriction enzymes and ligated to AP11 adaptor. After PCR with AP11 primer, the product was then subjected to hybridization capture using coated magnetic beads and a mixture of biotin-labelled SSR probes. Afer removing possible residue SSR probes, which may serve as PCR primers and lead to the lack of flanking sequences, again the product was PCR amplified using AP11 primer. The PCR product was ligated into a pCF-T vector.Kanamycin resistance, blue/white selection and colony PCR confirmed that all of the randomly picked white colonies contained plasmids with inserts of expected size.

text: TOPO 10 (E. coli)

text: Arachis glabrata x Arachis hypogaea

text: Enriched peanut library for SSRs

text: Plasmid

text: pCF-T (Tianwei Times Scientific Co Ltd, P R China)


text: University of Florida

text: live

text: Generic

text: UniformMu

characteristic: cultivar

text: DNA flanking Mu transposon insertions in Mu inactive lines were extracted from the UniformMu maize population by the thermo assymmetric interlaced PCR (TAIL) protocol using primers specific for the Mu terminal inverted repeat and a set of 16 arbitrary primers. Amplicons were size enriched using Sepharose 400 spin columns and cloned into the TOPO PCR4 vector.

text: Zea mays

text: W22 (ACR, bz1-m9)

text: UniformMu MuTAIL Library

text: plasmid


text: The Institute for Genomic Research

text: live

text: Generic

text: Hordeum vulgare

text: Barley methylation filtered library (Barley_F)


text: The Institute for Genomic Research

text: live

text: Generic

text: Hordeum vulgare

text: Barley methylation unfiltered library (Barley_U)


text: The Institute for Genomic Research

text: live

text: Generic

text: Triticum aestivum

text: Bread wheat methylation filtered library (Bread_Wheat_F)


text: The Institute for Genomic Research

text: live

text: Generic

text: Triticum aestivum

text: Bread wheat methylation unfiltered library (Bread_Wheat_U)


text: The Institute for Genomic Research

text: live

text: Generic

text: Gossypium hirsutum

text: Cotton methylation filtered library (Cotton_F)


text: The Institute for Genomic Research

text: live

text: Generic

text: Gossypium hirsutum

text: Cotton methylation unfiltered library (Cotton_U)


text: The Institute for Genomic Research

text: live

text: Generic

text: Pinus taeda

text: Pine methylation filtered library (Pine_F)


text: The Institute for Genomic Research

text: live

text: Generic

text: Pinus taeda

text: Pine methylation unfiltered library (Pine_U)


text: The Institute for Genomic Research

text: live

text: Generic

text: Oryza sativa

text: Rice methylation filtered library (Rice_F)


text: The Institute for Genomic Research

text: live

text: Generic

text: Oryza sativa

text: Rice methylation unfiltered library (Rice_U)


text: The Institute for Genomic Research

text: live

text: Generic

text: Glycine max

text: Soybean methylation filtered library (Soybean_F)


text: The Institute for Genomic Research

text: live

text: Generic

text: Glycine max

text: Soybean methylation unfiltered library (Soybean_U)


text: The Institute for Genomic Research

text: live

text: Generic

text: Hordeum vulgare

text: Barley methylation filtered library (LibID: 206)


text: The Institute for Genomic Research

text: live

text: Generic

text: Hordeum vulgare

text: Barley methylation unfiltered library (LibID: 215)


text: The Institute for Genomic Research

text: live

text: Generic

text: Gossypium hirsutum

text: Cotton methylation filtered library (LibID: 205)


text: The Institute for Genomic Research

text: live

text: Generic

text: Ceratodon purpureus

text: Moss methylation filtered library (LibID: 202)


text: The Institute for Genomic Research

text: live

text: Generic

text: Ceratodon purpureus

text: Moss methylation unfiltered library (LibID: 217)


text: The Institute for Genomic Research

text: live

text: Generic

text: Pinus taeda

text: Pine methylation filtered library (LibID: 204)


text: The Institute for Genomic Research

text: live

text: Generic

text: Pinus taeda

text: Pine methylation unfiltered library (LibID: 226)


text: The Institute for Genomic Research

text: live

text: Generic

text: Oryza sativa

text: Rice methylation filtered library (LibID: 203)


text: The Institute for Genomic Research

text: live

text: Generic

text: Oryza sativa

text: Rice methylation unfiltered library (LibID: 216)


text: The Institute for Genomic Research

text: live

text: Generic

text: Hordeum vulgare

text: Barley methylation unfiltered library (LibID: 127)


text: The Institute for Genomic Research

text: live

text: Generic

text: Brassica napus

text: Brassica napus methylation filtered library (LibID: 147)


text: The Institute for Genomic Research

text: live

text: Generic

text: Brassica napus

text: Brassica napus methylation unfiltered library (LibID: 148)


text: The Institute for Genomic Research

text: live

text: Generic

text: Triticum aestivum

text: Bread wheat methylation filtered library (LibID: 111)


text: The Institute for Genomic Research

text: live

text: Generic

text: Triticum aestivum

text: Bread wheat methylation unfiltered library (LibID: 138)


text: The Institute for Genomic Research

text: live

text: Generic

text: Gossypium hirsutum

text: Cotton methylation filtered library (LibID: 124)


text: The Institute for Genomic Research

text: live

text: Generic

text: Gossypium hirsutum

text: Cotton methylation unfiltered library (LibID: 125)


text: The Institute for Genomic Research

text: live

text: Generic

text: Ceratodon purpureus

text: Moss methylation filtered library (LibID: 153)


text: The Institute for Genomic Research

text: live

text: Generic

text: Ceratodon purpureus

text: Moss methylation unfiltered library (LibID: 154)


text: The Institute for Genomic Research

text: live

text: Generic

text: Pinus taeda

text: Pine methylation filtered library (LibID: 130)


text: The Institute for Genomic Research

text: live

text: Generic

text: Pinus taeda

text: Pine methylation unfiltered library (LibID: 131)


text: The Institute for Genomic Research

text: live

text: Generic

text: Solanum tuberosum

text: Potato methylation filtered library (LibID: 132)


text: The Institute for Genomic Research

text: live

text: Generic

text: Solanum tuberosum

text: Potato methylation unfiltered library (LibID: 133)


text: The Institute for Genomic Research

text: live

text: Generic

text: Oryza sativa

text: Rice methylation filtered library (LibID: 134)


text: The Institute for Genomic Research

text: live

text: Generic

text: Oryza sativa

text: Rice methylation unfiltered library (LibID: 135)


text: The Institute for Genomic Research

text: live

text: Generic

text: Glycine max

text: Soybean methylation filtered library (LibID: 145)


text: The Institute for Genomic Research

text: live

text: Generic

text: Glycine max

text: Soybean methylation unfiltered library (LibID: 146)


text: The Institute for Genomic Research

text: live

text: Generic

text: Ceratopteris richardii

text: Fern methylation filtered library (Fern_F)


text: The Institute for Genomic Research

text: live

text: Generic

text: Ceratopteris richardii

text: Fern methylation filtered library (LibID: 200)


text: The Institute for Genomic Research

text: live

text: Generic

text: Ceratopteris richardii

text: Fern methylation unfiltered library (Fern_U)


text: The Institute for Genomic Research

text: live

text: Generic

text: Ceratopteris richardii

text: Fern methylation unfiltered library (LibID: 129)


text: University of New Hampshire

text: live

text: Generic

text: Oreochromis niloticus


text: University of Notre Dame

text: live

text: Generic

text: Anopheles funestus

text: FUMOZ

text: Anopheles funestus BAC library

text: BAC

text: pIndigoBAC


text: University of Notre Dame

text: live

text: Generic

text: late 3rd star larvae

text: Mayetiola destructor

text: Great Plains

text: Hessian Fly Hf BAC Library

text: BAC

text: pIndigoBAC


text: University of Notre Dame

text: live

text: Generic

text: late 3rd instar larvae

text: Mayetiola destructor

text: Hessian Fly Mde BAC Library

text: BAC

text: pIndigoBAC


text: Genoscope - Centre National de Sequencage

text: live

text: Generic

text: Jemalong A17

text: Medicago truncatula

text: HindIII

text: HindIII

text: pIndigoBAC


text: Purdue University

text: live

text: Generic

text: DH10B-T1 phage resistant

text: Oryza alta

text: HindIII

text: HindIII

text: young leaves

text: Plasmid


text: New Mexico State University

text: live

text: Generic

text: Aquilegia chrysantha

text: Aquilegia chrysantha DNA


text: The University of Arizona

text: live

text: Generic

text: drk treated 36 hrs before harvest

characteristic: description

text: 2 week old seedlings

text: DH10B T1 phage resistant

text: Oryza rufipogon

text: HindIII

text: HindIII

text: young leaves

text: Plasmid


text: Plant Research International

text: live

text: Generic

text: Ecollete

text: OPC09 RAPD amplification of about 900 bases from two apple cultivars, Ecollete and Santana

text: Young

text: Malus domestica

characteristic: organism

text: Leaf

text: OPC09-900ES Ecollete

text: pGEM-T easy, Promega


text: Plant Research International

text: live

text: Generic

text: Santana

text: Young

text: Malus domestica

text: Leaf

text: OPC09-900ES Santana

characteristic: title

text: pGEM-T easy, Promega


text: The University of Arizona

text: live

text: Generic

text: mature

text: Oryza coarctata

text: HindIII

text: HindIII

text: leaves

characteristic: vector


text: The Institute for Genomic Research (TIGR; www.tigr.org)

text: live

text: Generic

text: Ovis aries


text: University of Notre Dame

text: live

text: Generic

text: Aedes aegypti genomic library enriched for (GA)n microsatellites

text: pupal

text: Aedes aegypti

text: Trinidad

characteristic: strain

text: whole body

text: Ae(GA)n


text: University of Notre Dame

text: live

text: Generic

text: Aedes aegypti genomic library enriched for (AAT)n microsatellites

text: pupal

text: Aedes aegypti

text: Trinidad

text: whole body

text: Ae(AAT)n


text: University of Notre Dame

text: live

text: Generic

text: Aedes aegypti genomic library enriched for (TAGA)n microsatellites

text: pupal

text: Aedes aegypti

text: Trinidad

text: whole body

text: Ae(TAGA)n


text: University of Notre Dame

text: live

text: Generic

text: Adult

text: Aedes aegypti

text: BamHI

text: Female

characteristic: sex

text: Liverpool strain which was selected for high Brugia malayi susceptibility

text: ND-LSBC

text: Cosmid


text: live

text: Generic

text: Blood

characteristic: cell type

text: The CHORI-243 sheep (M) (Ovis aries) BAC library produced by Pieter de Jong's lab at CHORI http://bacpac.chori.org/library.php?id=162

text: Ovis aries

text: EcoRI

text: EcoRI

text: Male

text: Texel breed

text: BAC


text: University of Georgia

text: live

text: Generic

text: Average 0.05 Unit HpaII enzyme was used to partially digest 1 ug maize genomic DNA at 37oC for 30 min, then the 1-2 kb fragments were cloned into PCR4-TOPO vector and electroporated into DH10B cell

text: Immature ear

characteristic: organ

text: Zea mays


text: University of Georgia

text: live

text: Generic

text: Average 0.05 Unit HpaII enzyme was used to partially digest 1 ug maize genomic DNA at 37oC for 30 min, then ~3 kb fragments were cloned into PCR4-TOPO vector and electroporated into DH10B cell

text: Immature ear

text: Zea mays


text: University of Georgia

text: live

text: Generic

text: Average 0.015 Unit HpyCH4IV enzyme was used to partially digest 1 ug maize genomic DNA at 37oC for 30 min, then the 1-2 kb fragments were cloned into PCR4-TOPO vector and electroporated into DH10B cell

text: Immature ear

text: Zea mays


text: University of Georgia

text: live

text: Generic

text: Average 0.015 Unit HpyCH4IV enzyme was used to partially digest 1 ug maize genomic DNA at 37oC for 30 min, then the 2-3 kb fragments were cloned into PCR4-TOPO vector and electroporated into DH10B cell

text: Immature ear

text: Zea mays


text: The University of Arizona

text: live

text: Generic

text: DH10B T1 phage resistant

characteristic: lab-host

text: Oryza glaberrima

text: HindIII

text: HindIII

text: young leaves

characteristic: tissue-type


characteristic: External Id

text: The University of Arizona

characteristic: INSDC center name

text: live

text: Generic

text: Oryza officinalis

text: HindIII

text: HindIII

text: leaves

text: Plasmid


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Adult

characteristic: dev-stage

text: Aedes aegypti

text: Female

text: Pooled eggs, pupae, newly emerged adults, 5-day old adults

text: Aedes aegypti full length cDNA library, 475-850 bp


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Adult

text: Aedes aegypti

text: Female

text: Aedes aegypti full length cDNA library, 900-1400 bp


text: live

text: Generic

text: Adult

text: Aedes aegypti

characteristic: organism

text: Female

text: re-sequenced clones from a mixture of (Brugia/Plasmodium/Dengue) infected and fat body cDNA libraries

text: Aedes re-sequencing


text: live

text: Generic

text: Adult

text: Aedes aegypti

text: Female

text: fat body tissues from adult females at 12 h intervals from 0 h post-eclosion to 96 h post blood feeding

text: Aedes aegypti - Fat Bodies Normalized (NAFFB2)

characteristic: title


text: live

text: Generic

text: Adult

text: Aedes aegypti

text: Female

text: adult females at 24 h, 3 days and 12 days post feeding on a Brugia malayi infected blood meal

text: Aedes aegypti infected with Brugia Malayi


text: live

text: Generic

text: MOYO-R strain, adult females at 24 h, 3 days, 8 days, and 12 days post feeding on a Plasmodium gallinaceum infected blood meal RED strain, adult females at 24 h, 3 days and 8 days post feeding on a Plasmodium gallinaceum infected blood meal

characteristic: description

text: Adult

text: Aedes aegypti

text: Female

text: Aedes aegypti infected with Plasmodium gallinaceum


text: live

text: Generic

text: Adult

text: Aedes aegypti

text: Female

text: Ibo-11 strain and DS3 strains: adult females at 24 h, 3 days, 7 days and 14 days post feeding on a Dengue-2 JAM1409 infected blood meal

text: Aedes aegypti infected with Dengue virus Pool library


text: UCSF Department of Urology

text: live

text: Generic

text: This library was constructed from MCF7 breast cancer cell line by Amplicon Express (http://www.genomex.com) using their standard procedure.

text: Homo sapiens

text: HindIII

text: female

text: Human MCF7 breast cancer cell line library (MCF7_1)

characteristic: vector


text: Japan Grassland Farming and Forage Seed Association

text: live

text: Generic

text: Lolium multiflorum

text: Lolium multiflorum DNA


text: University of Notre Dame

text: live

text: Generic

text: Aedes aegypti cosmid library constructed using SuperCos-1 vector.

text: Aedes aegypti

text: Aedes aegypti continuous cell line ATC-10

characteristic: strain


text: Vetsuisse Faculty Berne

text: live

text: Generic

text: Equus caballus

text: Equus caballus DNA (Klukowska-Roezler J)


text: INRA

text: live

text: Generic

text: fibroblast

characteristic: cell type

text: haplotype: H01

text: Sus scrofa

text: male

characteristic: sex

text: Large White

text: SBAB


text: live

text: Generic

text: Leptospira interrogans serovar Canicola

text: Hond Utrecht IV

text: Leptospira interrogans serovar Canicola, strain Hond Utrecht IV


text: Lawrence Berkeley National Laboratory

text: live

text: Generic

text: An isogenic w- Drosophila melanogaster strain was mutagenized by remobilization of transposable elements. We remobilized the WH element using the constitutive alpha-1 tubulin:piggyBac transposase source. We remobilized the WH element from a single ammunition element on the Binsinscy balancer chromosome in dysgenic females. We outcrossed dysgenic virgin females in vials to the isogenic w- strain and selected new hops in the following generation. All lines were mapped to a chromosome by standard genetic methods, examined for homozygous viability, and used for recovery of flanking genomic sequence by inverse PCR.

text: Drosophila melanogaster

text: isogenic w- strain

text: Exelixis piggyBac WH insertions

text: piggyBac transposable element

text: piggyBac WH (GenBank accession number AY515148)


text: Nara Institute of Science and Technology (NAIST)

text: live

text: Generic

text: Embryonic Stem Cell

text: Mus musculus

text: male

text: C57BL/6J x 129/SvJae

text: NAIST Gene Trap Library v6.4-UPAT-3ic


text: Lawrence Berkeley National Laboratory

text: live

text: Generic

text: The LA mutants of Drosophila melanogaster are a series of P-element transposon insertion mutants produced in the laboratories of John Merriam, Judith Lengyel and Stephen Poole. The P{Mae-UAS.6.11} P-element mutagenesis vector (FlyBase ID FBtp0001327) is similar to P{EP} in having a GAL4-inducible promoter for misexpression of flanking genes, but differs in that the transposon is marked with yellow rather than mini-white and in that the inducible promoter is directed outward from the 5' end rather than the 3' end. The mutator was mobilized from an X-chromosome site in males and these males were mated to females that were mutant for both the yellow and white genes. Transpositions to the autosomes were recovered in the progeny as exceptional yellow [+] males (Lengyel, J.A. and J. Merriam, 2001, Dros. Inf. Serv. 84:218-24). We determined this X-chromosome starting site to be 11734628 on the plus strand (Celniker, S. E., et al., 2002, Genome Biol 3:RESEARCH0079) (equivalent to scaffold AE003487.2 position 295085). Sequences flanking the P-element insertion site were determined for 1,045 mutant strains at the Lawrence Berkeley National Laboratory. Most strains sequenced were selected as having phenotypes when combined with a GAL4 driver, usually the P{w+mC=Act5C-GAL4}25FO1 driver expressing GAL4 under control of the Actin 5C promoter (Akieda, Y. and J. Merriam, 2001, Dros. Inf. Serv. 84:130-2). Genomic DNA was prepared from frozen samples of adult flies. Genomic sequences flanking the 5' end of the P-element insertion sites were amplified by inverse PCR and the PCR products were sequenced directly as described by Bellen H.J. et al., 2004, Genetics 167: 761-781.

text: Drosophila melanogaster

text: LA Drosophila melanogaster P{Mae-UAS.6.11} P-element insertion lines


text: University of Minnesota

text: live

text: Generic

text: Meleagris gallopavo

text: female

text: Turkey lambda ZAP small-insert library


text: Washington University School of Medicine

text: live

text: Generic

text: Caenorhabditis briggsae


text: Research Institute for the Biology of Farm Animals

text: live

text: Generic

text: lymphocyte

text: Zhu et al. Mamm Genome 10:706-709, 1999

text: Bos taurus

text: male

text: Jersey

text: Bos taurus male lymphocyte


text: live

text: Generic

characteristic: cultivar

text: Lupinus angustifolius

text: Leaf and Stem

text: Lupinus angustifolius genic microsatellite sequence


text: University of Missouri-Columbia

text: live

text: Generic

text: Random DNaseI fragments of Babesia bovis genomic DNA were ligated into vector DNA and the ligation product electroporated into MC1061 cells essentially as described by Matthews et al. (2002) 'Immunogenically fit subunit vaccine components via epitope discovery from natural peptide libraries' Journal of Immunology 169(2):837-46, except that the phosphorylated hairpin likers were 5'-GGCCGCTGGGGCCACCTGGTTCCGCAATACGCGGAACCAGGTGGCCCCAGCGGCC-3' and 5'-GGCCCCGTCGGCCCGGTGCACGGAGAATACCTCCGTGCACCGGGCCGACGGGGCC-3', the phage-display vector was fUSE5 (GenBank accession AF218364), and the cloning restriction enzyme was SfiI. In the recombinant clones of this library, which secrete infective virions because their gene-III reading frame has been restored, the 14-bp frameshifting stuffer between the gene-III SfiI sites has been replaced with a frame-restoring insert with the general structure GGGCCNNN---NNGGCCGCTG, where NNN---NN is the genomic DNaseI fragment with all but the last nucleotide of the coding sequence for the displayed B. bovis-derived peptide. It is the DNaseI fragment sequence that is reported for each clone. Starting with the first amino acid after the signal peptide, the mature form of the recombinant pIII coat protein on these virions has the following sequence fused to the N-terminus of the 406-residue mature form of wild-type pIII: adgaX-Xaag-, where X-X is the B. bovis-derived peptide.

text: asynchronous blood stage

text: Babesia bovis

text: SfiI

text: SfiI

text: Vera Cruz

text: Babesia bovis Natural Peptide Library-1

text: Filamentous phage


text: Ecole Nationale Veterinaire de Toulouse

text: live

text: Generic

text: EcoRV genomic DNA fragments library

text: Mycoplasmopsis bovis

text: type strain of Mycoplasma bovis

characteristic: type material

text: Plasmid

text: pBluescript


characteristic: External Id

text: Institute of Cytology and Genetics SB RAS

text: live

text: Generic

text: Seedling stage

text: Aegilops longissima

text: Plasmid

text: pDrive


text: Fred Hutchinson Cancer Research Center

characteristic: INSDC center name

text: live

text: Generic

text: Human primary peripheral blood CD34+ cells

text: Vector provirus LTR:chromosome junctions were rescued as plasmids in bacteria.

text: Homo sapiens

text: male

text: Foamy virus vector integration junctions in human CD34+ cells

text: Foamy retrovirus vector

text: pDeltaPhiPFmcsNO


text: Fred Hutchinson Cancer Research Center

characteristic: INSDC first public

text: live

text: Generic

text: Human Primary Fibroblast

text: GM05387, Coriell Institute for Medical Research, Camden, NJ

characteristic: cell-line

text: Homo sapiens

text: male

text: Foamy virus vector integration junctions in fibroblasts

text: Foamy retrovirus vector

text: pDeltaPhiPFmcsNO


text: Fred Hutchinson Cancer Research Center

characteristic: INSDC last update

text: live

text: Generic

text: Homo sapiens

text: male

text: Lenti virus vector integration junctions in human CD34+ cells

text: Lentivirus (HIV-1 based) retrovirus vector

text: HIV-PYmcsNO


text: German Genetrap Consortium (GGTC)

text: live

characteristic: INSDC status

text: Generic

text: Embryonic stem cell

text: ES cells 129S2 (formerly 129/SvPas)

text: Mus musculus

text: Male

text: 129 Sv

text: GGTC Gene Trap Library GV14C04

text: Retroviral insertion mutagen


text: German Genetrap Consortium (GGTC)

text: live

text: Generic

characteristic: NCBI submission model

text: Embryonic stem cell

text: ES cells [C57BL/6J x 129S6/SvEvTac] F1

text: Mus musculus

text: Male

text: 129 Sv

text: GGTC Gene Trap Library GV18C05

text: Retroviral insertion mutagen


text: Massachusetts Institute of Technology

text: live

text: Generic

characteristic: NCBI submission package

text: uncultured organism

text: uncultured organism North Pacific Subtropical Gyre


text: Massachusetts Institute of Technology

text: live

text: Generic

text: uncultured organism

characteristic: organism

text: North Pacific Subtropical Gyre (Hawaii) picoplankton genomic DNA library


text: live

text: Generic

text: Embryonic stem cell

text: ES cells [C57BL/6J x 129S6/SvEvTac] F1

text: Mus musculus

text: Male

text: 129 Sv

characteristic: title

text: Plasmid insertion mutagen


text: live

text: Generic

text: Embryonic stem cell

text: ES cells 129P2 (formerly 129/Ola)

text: Mus musculus

text: Male

text: 129 Sv

text: Plasmid insertion mutagen


text: live

text: Generic

text: Embryonic stem cell

text: ES cells [C57BL/6J x 129S6/SvEvTac] F1

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen


text: live

text: Generic

text: Embryonic stem cell

text: ES cells 129P2 (formerly 129/Ola)

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen


text: live

text: Generic

text: Embryonic stem cell

text: ES cells 129S1 (stock no. 000090)

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen


text: live

text: Generic

text: Embryonic stem cell

text: ES cells [129/Sv x 129X1 (formerly 129/SvJ)]

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen


text: live

text: Generic

text: Embryonic stem cell

text: ES cells 129P2 (formerly 129/Ola)

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen

text: FlipROSAbetageo


text: live

text: Generic

text: Embryonic stem cell

text: ES cells 129S1 (stock no. 000090)

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen

text: FlipROSAbetageo


text: live

text: Generic

text: Embryonic stem cell

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen

text: FlipROSAbetageo


text: live

text: Generic

text: Embryonic stem cell

text: ES cells 129P2 (formerly 129/Ola)

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen

text: rFlpROSAbetageo


text: live

text: Generic

text: Embryonic stem cell

text: ES cells 129S1 (stock no. 000090)

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen

text: rFlpROSAbetageo


text: live

text: Generic

text: Embryonic stem cell

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen

text: rFlpROSAbetageo


text: live

text: Generic

text: Embryonic stem cell

text: ES cells 129P2 (formerly 129/Ola)

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen

text: FlipROSACeo


text: live

text: Generic

text: Embryonic stem cell

text: ES cells 129S1 (stock no. 000090)

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen

text: FlipROSACeo


text: live

text: Generic

text: Embryonic stem cell

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen

text: FlipROSACeo


text: live

text: Generic

text: Embryonic stem cell

text: ES cells 129S2 (formerly 129/SvPas)

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen

text: FlipROSACeo


text: live

text: Generic

text: Embryonic stem cell

text: ES cells 129P2 (formerly 129/Ola)

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen

text: eFlpROSAbetageo


text: live

text: Generic

text: Embryonic stem cell

text: ES cells 129S1 (stock no. 000090)

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen

text: eFlpROSAbetageo


text: live

text: Generic

text: Embryonic stem cell

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen

text: eFlpROSAbetageo


text: German Genetrap Consortium (GGTC)

text: live

text: Generic

text: Embryonic stem cell

text: ES cells 129S2 (formerly 129/SvPas)

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen

text: eFlpROSAbetageo


text: German Genetrap Consortium (GGTC)

text: live

text: Generic

text: Embryonic stem cell

text: ES cells [C57BL/6J x 129S6/SvEvTac] F1

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen

text: eFlpROSAbetageo


text: live

text: Generic

text: Embryonic stem cell

text: ES cells 129P2 (formerly 129/Ola)

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen

text: FlipROSAbetaCeo


text: live

text: Generic

text: Embryonic stem cell

text: ES cells 129S1 (stock no. 000090)

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen

text: FlipROSAbetaCeo


text: live

text: Generic

text: Embryonic stem cell

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen

text: FlipROSAbetaCeo


text: live

text: Generic

text: Embryonic stem cell

text: ES cells 129S2 (formerly 129/SvPas)

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen

text: FlipROSAbetaCeo


text: live

text: Generic

text: Embryonic stem cell

text: ES cells [C57BL/6J x 129S6/SvEvTac] F1

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen

text: FlipROSAbetaCeo


text: live

text: Generic

text: Embryonic stem cell

text: ES cells 129P2 (formerly 129/Ola)

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen

text: reFlipROSACeo


text: live

text: Generic

text: Embryonic stem cell

text: ES cells 129S1 (stock no. 000090)

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen

text: reFlipROSACeo


text: live

text: Generic

text: Embryonic stem cell

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen

text: reFlipROSACeo


text: live

text: Generic

text: Embryonic stem cell

text: ES cells 129S2 (formerly 129/SvPas)

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen

text: reFlipROSACeo


text: German Genetrap Consortium (GGTC)

text: live

text: Generic

text: Embryonic stem cell

text: ES cells [C57BL/6J x 129S6/SvEvTac] F1

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen

text: reFlipROSACeo


text: live

text: Generic

text: Embryonic stem cell

text: ES cells 129P2 (formerly 129/Ola)

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen


text: live

text: Generic

text: Embryonic stem cell

text: ES cells 129S1 (stock no. 000090)

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen


text: live

text: Generic

text: Embryonic stem cell

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen


text: live

text: Generic

text: Embryonic stem cell

text: ES cells 129S2 (formerly 129/SvPas)

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen


text: live

text: Generic

text: Embryonic stem cell

text: ES cells [C57BL/6J x 129S6/SvEvTac] F1

text: Mus musculus

text: Male

text: 129 Sv

text: Retroviral insertion mutagen


text: Division de Microbiologia

text: live

text: Generic

text: Fosmid Library Alicante Salterns (FLAS): Environmental sample from crystallizer pond CR30, in multi-pond saltern Bras del Port, Santa Pola 370, Alicante, Spain (38 11 44.66 North 0 35 01.93 West). Collected in november 2002.

characteristic: description

text: uncultured prokaryote


text: National Institute of Agricultural Biotechnology

text: live

text: Generic

text: Chiifu

text: Brassica rapa ssp pekinensis var. Chiifu BAC library (KBrS BAC) is available at NIAB.

text: E. coli DH10B

characteristic: lab-host

text: Brassica rapa subsp. pekinensis

text: KBrS, Brassica rapa Sau3AI BAC library

text: BAC

characteristic: vector


text: Indian Institute of Technology, Kharagpur

text: live

text: Generic

text: The RAPD fragments were eluted out from the agarose gel and purified using QiaQuick gel extraction kit following the manufacturer's protocol. For cloning, 4ul of the fresh PCR product was mixed in 1ul of salt solution and 1ul of pCR2.1 TOPO TA vector mix (10ng of plasmid DNA). The ligation mixture was gently mixed by tapping and incubated for 20 mins at room temperature. The reaction was placed on ice before proceeding for transformation.

text: Pupa

characteristic: dev-stage

text: Antheraea mylitta

text: EcoRI

text: EcoRI

text: Whole body

characteristic: tissue-type

text: RAPD amplified fragment

text: Plasmid

text: pCR2.1 TOPO TA


text: University of Bonn, C/o Centre for Development Research (ZEF)

text: live

text: Generic

text: ICP 2376

characteristic: cultivar

text: Genomic DNA obtained from Cajanus cajan (L.) Millsp. were cloned into the pBluescript cloning vector and subsequently screened with repeat motif probes to identify clones with microsatellite sequences. Plasmid DNA was sequenced with T7 primer from the 5' end and T3 from the 3' end.

text: E.coli DH10B (Invitrogen)

text: Cajanus cajan

text: Leaf

text: Pigeonpea genomic pBluescript library

text: plasmid

text: pBluescript (Stratagene)


text: National Livestock Research Institute, RDA

text: live

text: Generic

text: KNP BAC library represents seven genome equivalents. Average insert size is about 125 kb.

text: Sus scrofa

text: EcoRI

text: EcoRI

text: male

characteristic: sex

text: Korean Native Pig

characteristic: strain

text: White Blood Cell

text: Korean Native Pig BAC Library

text: BAC


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: ICP 2376

text: Genomic DNA obtained from Cajanus cajan (L.) Millsp. were enriched for microsatellites and cloned into pGEM-T cloning vector. Colony PCR products were sequenced with T7 primer from the 5' end and SP6 from the 3' end.

text: E.coli DH10B (Invitrogen)

text: Cajanus cajan

text: Leaf

text: Pigeonpea genomic pGEM-T library

text: plasmid

text: pGEM-T (Promega)


characteristic: INSDC first public

text: live

text: Generic

text: ICP 2376

text: Genomic DNA obtained from Cajanus cajan (L.) Millsp. were cloned into the respective cloning vector. Plasmid DNA was sequenced with T7 primer from the 5' end.

text: E.coli DH10B (Invitrogen)

text: Cajanus cajan

text: TSP5091, Sau3AI

text: Leaf

text: Pigeonpea genomic pBluescript and pGEM-T library

text: plasmid

text: pBluescript (Stratagene), pGEM-T (Promega)


text: Faculty of Agriculture, Hokkaido University

characteristic: INSDC last update

text: live

text: Generic

text: Antirrhinum majus

text: Antirrhinum majus DNA (kishima y)


text: RIKEN Genomic Sciences Center

text: live

characteristic: INSDC status

text: Generic

text: Mus musculus molossinus

text: EcoRI

text: EcoRI

text: male

text: mixture of kidney and spleen

text: MSMg01 Mouse Male BAC Library


text: Inst. of Grassland & Environmental Res.

text: live

text: Generic

characteristic: NCBI submission model

text: isolate: OUS1

text: Orpinomyces sp. OUS1

text: Orpinomyces sp. OUS1 DNA


text: University of Reading

text: live

text: Generic

characteristic: NCBI submission package

text: IFC 5 [CIV]

text: Theobroma cacao

text: Theobroma cacao cv. IFC 5 [CIV]


text: University of Reading

text: live

text: Generic

text: SPEC 160/9

text: Theobroma cacao

characteristic: organism

text: Theobroma cacao cv. SPEC 160/9


text: University of Reading

text: live

text: Generic

text: DOM 14

text: Theobroma cacao

text: Theobroma cacao cv. DOM 14

characteristic: title


text: University of Reading

text: live

text: Generic

text: IMC 20

text: Theobroma cacao

text: Theobroma cacao cv. IMC 20


text: University of Reading

text: live

text: Generic

text: ICS 70

text: Theobroma cacao

text: Theobroma cacao cv. ICS 70


text: University of Reading

text: live

text: Generic

text: ICS 1

text: Theobroma cacao

text: Theobroma cacao cv. ICS 1


text: University of Reading

text: live

text: Generic

text: SCA 6

text: Theobroma cacao

text: Theobroma cacao cv. SCA 6


text: University of Reading

text: live

text: Generic

text: MAN 15/2 [BRA]

text: Theobroma cacao

text: Theobroma cacao cv. MAN 15/2 [BRA]


text: University of Reading

text: live

text: Generic

text: PA 107

text: Theobroma cacao

text: Theobroma cacao cv. PA 107


text: University of Reading

text: live

text: Generic

text: NA 776

text: Theobroma cacao

text: Theobroma cacao cv. NA 776


text: University of Reading

text: live

text: Generic

text: ICS 43

text: Theobroma cacao

text: Theobroma cacao cv. ICS 43


text: University of Reading

text: live

text: Generic

text: MAN 15/60 [BRA]

text: Theobroma cacao

text: Theobroma cacao cv. MAN 15/60 [BRA]


text: University of Reading

text: live

text: Generic

text: T 85/799

text: Theobroma cacao

text: Theobroma cacao cv. T 85/799


text: USDA/ARS

text: live

text: Generic

text: US H20

text: A pilot project to evaluate efficacy of cloning and sequencing under-methylated regions of the beet genome was conducted with assistance from Orion Genomics, St. Louis, MO, USA. Such under-methylated regions often correspond to genomic regions with higher proportions of genes. 694 sequence reads were derived from transforming sugar beet genomic DNA into a restriction and methylation competent strain of E. coli, representing sequences from the less highly methylated fraction of the beet genome.

characteristic: description

text: young leaves

text: E. coli McrBC+

text: leaf

characteristic: organ

text: Beta vulgaris

text: leaf

text: Sugar beet methylation filtered library (LibID: 563)


text: USDA/ARS

text: live

text: Generic

text: US H20

text: A pilot project to evaluate efficacy of cloning and sequencing under-methylated regions of the beet genome was conducted with assistance from Orion Genomics, St. Louis, MO, USA. Such under-methylated regions often correspond to genomic regions with higher proportions of genes. 1,285 sequence reads were derived from transforming sugar beet genomic DNA into a restriction and methylation competent strain of E. coli, representing sequences from the less highly methylated fraction of the beet genome.

text: young leaves

text: E. coli McrBC-

characteristic: lab-host

text: leaf

text: Beta vulgaris

text: leaf

text: Sugar beet unfiltered library (LibID: 644)


text: The Institute for Genomic Research

text: live

text: Generic

text: Wolbachia endosymbiont of Drosophila mojavensis DNA (Salzberg SL)


text: Institut Pasteur de Lille

text: live

text: Generic

text: Partially Hind III digested and size-selected S. mansoni cercarial DNA was ligated into Hind III digested pBeloBAC 11 vector and used to transform E. coli DH10B. The complete library contains 23808 clones from 4 independent sizing-ligation-transformations. Average insert size ranges from 70-127 kb and genome coverage is 7.9-fold.

text: cercariae

characteristic: dev-stage

text: Biomphalaria glabrata

text: Schistosoma mansoni

text: Hind III

text: mixed

text: Puerto-Rican

text: BAC

text: pBeloBAC 11

characteristic: vector


text: Genoscope - Centre National de Sequencage

text: live

text: Generic

text: Tetraodon nigroviridis

text: G


text: Sanger Centre

text: live

text: Generic

text: Constructed at the Institute for Genomic Research (TIGR), Rockville, MD. Genomic DNA isolated from a cloned population of Trypanosoma brucei (TREU927/4 GUTat 10.1) was mechanically sheared to give a tight size distribution (4 kb). The v + i method used for the library construction is described in detail in Smith, H. and Venter, J.C. (Making small insert libraries for whole genome shotgun sequencing projects. In Genome Sequencing: A Practical Approach, eds. M. Vaudin and B. Barrell, Oxford University Press, 1999). Email: nelsayed@tigr.org

text: Trypanosoma brucei

text: Trypanosoma brucei TREU927 sheared genomic DNA


text: Hiroshima University

text: live

text: Generic

text: Chlorella vulgaris

text: Chlorella vulgaris C-169


text: The University of Arizona

text: live

text: Generic

text: DH10B T1 phage resistant

text: Oryza meyeriana var. granulata

text: HindIII

text: HindIII

text: young leaves

characteristic: tissue-type


text: The University of Arizona

text: live

text: Generic

text: Oryza ridleyi

text: HindIII

text: HindIII

text: leaves

text: Plasmid


text: University of Washington

text: live

text: Generic

text: Human Primary Fibroblasts

characteristic: cell type

text: GM05387, Coriell Institute for Medical Research, Camden, NJ

characteristic: cell-line

text: AAV Vector:Chromosome Junction Sequences rescued as plasmids in bacteria. Files with names differing only by x1 or y1 contain sequence reads from either end of the same AAV vector provirus. 'y1' indicates the 'left' and 'x1' indicates the 'right' primer was used to initiate sequencing reactions.

text: Homo sapiens

text: male

characteristic: sex

text: Adeno-Associated Virus Vector Integration Junctions


characteristic: External Id

text: US DOE Joint Genome Institute

characteristic: INSDC center name

text: live

text: Generic

text: marine picoplankton, less than 1.8 um, greater than 0.22 um fraction

text: North Pacific Subtropical Gyre (Hawaii) picoplankton genomic fosmid DNA library prepared from marine picoplankton in the less than 1.6 um, greater than 0.22 um fraction. Picoplankton collected at 70 m depth on 10/7/2002, Coordinates: 22.45 N, 158 W Sample Date: 10/7/2002 Coordinates: 22.45 N, 158 W Depth 70 m Temperature: 24.93 C Salinity: 35.21 psu Oxygen: 217.4 umol/kg

text: uncultured marine microorganism HF70_10-07-02

text: fosmid


text: US DOE Joint Genome Institute

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: North Pacific Subtropical Gyre (Hawaii) picoplankton genomic fosmid DNA library prepared from marine picoplankton in the less than 1.6 um, greater than 0.22 um fraction. Picoplankton collected at 10 m depth on 10/7/2002, Coordinates: 22.45 N,158 W. Sample Date: 10/7/2002 Coordinates: 22.45 N, 158 W Depth: 10 m Temperature: 26.4 C Salinity 35.08 psu Oxygen: 204.6 umol/kg

text: uncultured marine microorganism HF10_10-07-02

text: fosmid


text: US DOE Joint Genome Institute

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: North Pacific Subtropical Gyre (Hawaii) picoplankton genomic fosmid DNA library prepared from marine picoplankton in the less than 1.6 um, greater than 0.22 um fraction. Picoplankton collected at 130 m depth on 10/6/2002, Coordinates: 22.45 N,158 W. Sample Date: 10/6/2002 Coordinates: 22.45 N, 158 W Depth 130 m Temperature: 22.19 C Salinity: 35.31 psu Oxygen: 204.9 umol/kg

text: uncultured marine microorganism HF130_10-06-02

text: fosmid


text: US DOE Joint Genome Institute

text: live

text: Generic

characteristic: NCBI submission package

text: North Pacific Subtropical Gyre (Hawaii) picoplankton genomic fosmid DNA library prepared from marine picoplankton in the less than 1.6 um, greater than 0.22 um fraction. Picoplankton collected at 200 m depth on 10/6/2002, Coordinates: 22.45 N,158 W. Sample Date: 10/6/2002 Coordinates: 22.45 N, 158 W Depth 200 m Temperature: 18.53 C Salinity: 35.04 psu Oxygen: 198.8 umol/kg

text: uncultured marine microorganism HF200_10-06-02

characteristic: organism

text: fosmid


text: US DOE Joint Genome Institute

text: live

text: Generic

text: North Pacific Subtropical Gyre (Hawaii) picoplankton genomic fosmid DNA library prepared from marine picoplankton in the less than 1.6 um, greater than 0.22 um fraction. Picoplankton collected at 4000 m depth on 10/7/2002, Coordinates: 22.45 N,158 W. Sample Date: 12/21/2003 Coordinates: 22.45 N, 158 W Depth 4000 m Temperature: 1.46 C Salinity: 34.69 Oxygen: 147.8 umol/kg

characteristic: description

text: uncultured marine microorganism HF4000_12-21-03

characteristic: title

text: fosmid


text: US DOE Joint Genome Institute

text: live

text: Generic

text: North Pacific Subtropical Gyre (Hawaii) picoplankton genomic fosmid DNA library prepared from marine picoplankton in the less than 1.6 um, greater than 0.22 um fraction. Picoplankton collected at 500 m depth on 10/6/2002, Coordinates: 22.45 N,158 W. Sample Date: 10/6/2002 Coordinates: 22.45 N, 158 W Depth 500 m Temperature: 7.25 C Salinity: 34.07 psu Oxygen: 118.0 umol/kg

text: uncultured marine microorganism HF500_10-06-02

text: fosmid


text: US DOE Joint Genome Institute

text: live

text: Generic

text: North Pacific Subtropical Gyre (Hawaii) picoplankton genomic fosmid DNA library prepared from marine picoplankton in the less than 1.6 um, greater than 0.22 um fraction. Picoplankton collected at 770 m depth on 12/21/2003, Coordinates: 22.45 N,158 W. Sample Date: 12/21/2003 Coordinates: 22.45 N, 158 W Depth 770 m Temperature: 4.78 C Salinity: 34.32 psu Oxygen: 32.3 umol/kg

text: uncultured marine microorganism HF770_12-21-03

text: fosmid


text: The Institute for Genomic Research

text: live

text: Generic

text: Callithrix jacchus


text: The Institute for Genomic Research

text: live

text: Generic

text: Papio hamadryas hamadryas


text: The Institute for Genomic Research

text: live

text: Generic

text: Pan troglodytes


text: University of Wisconsin, Madison

text: live

text: Generic

text: Molecular analysis of deletions near genomic position 50C in Drosophila melanogaster and of some transposon insertions. Deletion endpoints which are bounded on one side by the transposable element P{CaSpeR} were amplified from total genomic DNA by TAIL PCR. Sites of P element insertions were also amplified from total genomic DNA by TAIL PCR. The deletions in the 50C region, were created by Christine R. Preston in the lab of William Engels (Preston et al., 1996 Flanking duplications and deletions associated with P-induced male recombination in Drosophila. Genetics 144(4): 1623--1638 (PMID: 8978050)). The deletions were caused by 'HEI', hybrid element insertion, an aberrant effect of P element mobilization. These deletions retain a CaSpeR element at the original insertion site but have flanking deletions extending proximally or distally. TAIL PCR (Liu YG, Whittier RF. 'Thermal asymmetric interlaced PCR: automatable amplification and sequencing of insert end fragments from P1 and YAC clones for chromosome walking.' Genomics. 1995 Feb 10; 25(3): 674-81(PMID: 7759102)) was used to amplify the (unknown) deletion junctions. The resulting TAIL PCR products were sequenced. For reference, the starting element, P{CaSpeR}Cp1~50C (FBti0004219) which remains at the left or right boundary of all these deletions has the 8 bp target duplication of GATTGGGC. TAIL PCR was also used to determine the position of the P element insertion in the peanuts (pea1) mutant stock. Some of the deletions/insertions were confirmed by PCR using a primer from the newly determined genomic sequence paired with a P element primer and re- sequenced.

text: Drosophila melanogaster

text: Drosophila melanogaster deficiency and P element insertion lines


text: Department of Genetics, The Hospital for Sick Children

text: live

text: Generic

text: Individual chromosomes were flow sorted from a rodent/hybrid cell line containing the single human chromosome of interest.

text: Homo sapiens

text: BamHI

text: BamHI

text: LL07NC01-96 well

text: Cosmid

text: LAWRIST 16


text: Warsaw Agricultural University

text: live

text: Generic

text: DNA was isolated using a standard CTAB method.Two DNA samples, 43 micrograms each, were partially restricted in separate tubes with Sau 3AI. After electrophoresis 0.5-1.1kb fragments were isolated and pooled together. Forty ng of such DNA mixture was used for ligation with 1 microgram of ZAP Express vector. The size of the library containing any given sequence with 99% probability was estimated according to the equation: N = ln(1 - 0.99)/ln(1 - (IS/GS)) where N is the number of clones, IS and GS are insert and genome size respectively given in base pairs.

text: Secale cereale

text: Inbred line L318

characteristic: strain

text: young leaves

text: Rye Zap Express Library

text: Phage

text: Zap Express


text: University of New Mexico

text: live

text: Generic

text: 40 F2 snails from one adult by selfing

text: adult (10-12 mm shell diameter)

characteristic: dev-stage

characteristic: lab-host

text: Biomphalaria glabrata

text: HindIII

text: HindIII

text: hermaphrodite

text: ovotestis

text: BG-BBa

text: BAC


text: Celera Genomics

text: live

text: Generic

text: Homo sapiens

text: Homo sapiens DNA (Celera Genomics)


text: Celera Genomics

text: live

text: Generic

text: Pan troglodytes

text: Pan troglodytes DNA (Celera Genomics)


text: Celera Genomics

text: live

text: Generic

text: Mus musculus

text: Mus musculus DNA (Celera Genomics)


text: University of New Hampshire

text: live

text: Generic

text: Oreochromis niloticus


text: National Key Laboratory of Crop Genetics & Germplasm Enhancement, Nanjing Agricultural University

text: live

text: Generic

text: Gossypium hirsutum

text: Gossypium hirsutum BAC library


text: Warsaw Agricultural University

text: live

text: Generic

text: DNA was isolated using a standard CTAB method. 15 micrograms of DNA was used to amplification using the RAPD primer D12. The PCR product was cloned into the TOPO vector and transformed the recombinant vector into competent E. coli.

text: Secale cereale

text: Inbred line L9

text: young leaves

characteristic: tissue-type

text: TOPO TA Cloning

text: pUC plasmid

text: PCRII-TOPO

characteristic: vector


text: USDA-ARS Crop Germplasm Research Unit

text: live

text: Generic

characteristic: cultivar

text: For more details on library construction, ordering clones and sequence analysis see http://algodon.tamu.edu/htdocs-cotton/cottondb.html

text: Gossypium hirsutum

text: BamHI; HindIII; EcoRI

text: young leaves

text: Plasmid, BAC and BIBAC libraries from upland cotton genetic standard TM-1

text: BAC; plasmid

text: pCLD04541; pBeloBAC11; pGEM11


text: Washington University School of Medicine

text: live

text: Generic

text: Anolis smaragdinus

text: AGAA

text: AGAA


text: UMRGV, INRA/CNRS

text: live

text: Generic

text: Wassillewskija

text: Arabidopsis thaliana

text: Arabidopsis thaliana T-DNA insertion lines Wassillewskija


text: Southern Illinois University at Carbondale and The Institute for Genomic Research

text: live

text: Generic

text: Forrest

text: Soybean (Glycine max (L.) Merr.) cv. Forrest seeds were grown in greenhouse for fourteen days. Nuclei were isolated and embedded in agarose, restriction digested with Hind III BamH1 or EcoRI, large size DNA fragments were ligated in vector semi-automatically examined to find the best set of BamHI and uild 2 and were end sequence previously. Mean clone insert size in MTP4BH was 175 kbp. MTP4BH can be viewed at http://soybeangenome.siu.edu. This set of clones were picked from contigs that appeared to contain 4 or 8 different but highly conserved regions o the genome. Tetraploid contigs are labelled ctg 8000 and up. Octaploid contigs are labelled ctg9000 and up. The MTP4BH clones were end sequenced.

text: Glycine max

text: NotI

text: leaves

text: LargeInsertSoybeanGenLibRpt

text: pCLD04541 (BamHI and HindIII clones)


text: Istituto Agrario di San Michele all'Adige (IASMA)

text: live

text: Generic

text: Pinot noir clone ENTAV 115

text: Vitis vinifera

text: HindIII

text: HindIII

text: Nuclei preparation from leaf

text: IASMA L1 HindIII BAC library

text: BAC

text: pIndigoBAC


text: live

text: Generic

text: Pinot noir clone ENTAV 115

text: Vitis vinifera

text: HindIII

text: HindIII

text: Nuclei preparation from leaf

text: IASMA L2 HindIII BAC library

text: BAC

text: pIndigoBAC


text: University of Tsukuba

text: live

text: Generic

text: cercariae

text: Schistosoma mansoni

text: NMRI

text: pCRII


text: University of Veterinary Medicine

text: live

text: Generic

text: Equus caballus

text: Equus caballus DNA (Kuiper HJ)


text: University for Veterinary Medicine

text: live

text: Generic

text: Equus caballus


text: Hubrecht Laboratory

text: live

text: Generic

text: Danio rerio

text: mixed

characteristic: sex

text: TL

text: Zebrafish custom amplicons


characteristic: External Id

text: Kazusa DNA Research Institute

text: live

text: Generic

text: Trifolium pratense

text: Trifolium pratense DNA (Sato S)


text: TIGR

characteristic: INSDC center name

text: live

text: Generic

text: nsformed into E. coli DH10-B. For details, See Vilarinhos et al., Theor Appl Genet. 106:1102-6, 2003 and http://www.musagenomics.org/index.php?page=resources-%3Ebac.

text: greenhouse-grown leaves

characteristic: organ

text: Musa acuminata

text: HindIII


text: Center for Applied Genetic Technologies

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Limnanthes alba subsp. versicolor

text: Limanthese alba methylation filtered library (LibID527)


text: Center for Applied Genetic Technologies

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Limnanthes alba subsp. versicolor

text: Limanthese alba methylation unfiltered library (LibID803)


text: Center for Applied Genetic Technologies

text: live

text: Generic

characteristic: NCBI submission package

text: Arachis batizocoi

characteristic: organism

text: Arachis batizocoi methylation filtered library (LibID703)


text: Center for Applied Genetic Technologies

text: live

text: Generic

text: Arachis batizocoi

text: Arachis batizocoi methylation unfiltered library (LibID764)

characteristic: title


text: Center for Applied Genetic Technologies

text: live

text: Generic

text: Arachis duranensis

text: Arachis duranensis methylation filtered library (LibID643)


text: Center for Applied Genetic Technologies

text: live

text: Generic

text: Arachis duranensis

text: Arachis duranensis methylation unfiltered library (LibID762)


text: Center for Applied Genetic Technologies

text: live

text: Generic

text: Arachis hypogaea

text: Arachis hypogaea methylation filtered library (LibID702)


text: Center for Applied Genetic Technologies

text: live

text: Generic

text: Arachis hypogaea

text: Arachis hypogaea methylation unfiltered library (LibID763)


text: SGGW Warsaw Agricultural University

text: live

text: Generic

text: Cucumis sativus line B mitochondrial DNA enriched fosmid genomic library.

characteristic: description

text: Cucumis sativus

text: Cucumis sativus line B mitochondrial DNA enriched fosmid library


text: SGGW Warsaw Agricultural University

text: live

text: Generic

text: Cucumis sativus line MSC16 mitochondrial DNA enriched fosmid genomic library

text: Cucumis sativus

text: Cucumis sativus line MSC16 mitochondrial DNA enriched fosmid library


text: Wellcome Trust Sanger Institute

text: live

text: Generic

text: Embryonic Stem Cell

characteristic: cell type

text: Mus musculus

text: Male

text: 129 OLA

characteristic: strain

text: Sanger Institute Gene Trap Library pGT0lxf


text: Wellcome Trust Sanger Institute

text: live

text: Generic

text: Embryonic Stem Cell

text: Mus musculus

text: Male

text: 129 OLA

text: Sanger Institute Gene Trap Library pGT0lxr


text: Wellcome Trust Sanger Institute

text: live

text: Generic

text: Embryonic Stem Cell

text: Mus musculus

text: Male

text: 129 OLA

text: Sanger Institute Gene Trap Library pGT2lxr


text: Wellcome Trust Sanger Institute

text: live

text: Generic

text: Embryonic Stem Cell

text: Mus musculus

text: Male

text: 129 OLA

text: Sanger Institute Gene Trap Library pGT0lxfT2


text: Wellcome Trust Sanger Institute

text: live

text: Generic

text: Embryonic Stem Cell

text: Mus musculus

text: Male

text: 129 OLA

text: Sanger Institute Gene Trap Library pGT0lxfT1


text: Wellcome Trust Sanger Institute

text: live

text: Generic

text: Embryonic Stem Cell

text: Mus musculus

text: Male

text: 129 OLA

text: Sanger Institute Gene Trap Library pGT0lxf*


text: Wellcome Trust Sanger Institute

text: live

text: Generic

text: Embryonic Stem Cell

text: Mus musculus

text: Male

text: 129 OLA

text: Sanger Institute Gene Trap Library pGT0lxfT2v


text: Centers for Disease Control and Prevention

text: live

text: Generic

text: Candida parapsilosis

text: CLIB214 (ATCC 22019)

text: Candida parapsilosis strain CLIB214


text: Wellcome Trust Sanger Institute

text: live

text: Generic

text: Embryonic Stem Cell

text: Mus musculus

text: Male

text: 129 OLA

text: Sanger Institute Gene Trap Library pGT0lxrT2


text: Wellcome Trust Sanger Institute

text: live

text: Generic

text: Embryonic Stem Cell

text: Mus musculus

text: Male

text: 129 OLA

text: Sanger Institute Gene Trap Library pGT1lxr


text: Wellcome Trust Sanger Institute

text: live

text: Generic

text: Embryonic Stem Cell

text: Mus musculus

text: Male

text: 129 OLA

text: Sanger Institute Gene Trap Library pGT2lxf


text: Wellcome Trust Sanger Institute

text: live

text: Generic

text: Embryonic Stem Cell

text: Mus musculus

text: Male

text: 129 OLA

text: Sanger Institute Gene Trap Library pGT1lxrT2


text: Texas A&M University

text: live

text: Generic

text: Felis catus

text: Felis catus chromosome Y DNA


text: Purdue University

text: live

text: Generic

characteristic: lab-host

text: Phaseolus vulgaris

text: young leaves

characteristic: tissue-type

text: Plasmid


text: Kazusa DNA Research Institute

text: live

text: Generic

text: synonym: Lotus corniculatus var. japonicus

text: Lotus japonicus

text: Miyakojima MG-20

text: genomic BAC library

characteristic: vector


text: Kazusa DNA Research Institute

text: live

text: Generic

text: Lotus japonicus

text: Miyakojima MG-20

text: genomic TAC library


text: University of Georgia, Center for Applied Genetic Technologies

text: live

text: Generic

characteristic: cultivar

text: Cenchrus americanus


characteristic: External Id

text: live

text: Generic

text: Sorghum bicolor

text: BTXX


characteristic: INSDC center name

text: live

text: Generic

text: Sorghum bicolor


text: live

text: Generic

text: Sorghum propinquum

text: SPQM


text: live

text: Generic

text: Cynodon transvaalensis


text: live

text: Generic

text: Cynodon dactylon


text: live

text: Generic

text: Eragrostis pilosa

text: TFEP


text: live

text: Generic

text: Kaua murri

text: Eragrostis tef

text: TFKM


text: The Sanger Institute

text: live

text: Generic

text: Sus scrofa

text: male

characteristic: sex

text: Blood cells

text: Sus scrofa Blood cells


text: The Sanger Institute

characteristic: INSDC first public

text: live

text: Generic

text: Sus scrofa

text: female

text: White blood cells

text: Sus scrofa White blood cells


text: Kansas State University

characteristic: INSDC last update

text: live

text: Generic

text: transgenic line PG3

text: Agrostis stolonifera var. palustris

text: Agrostis stolonifera var. palustris DNA transgenic line PG3


text: Kansas State University

text: live

characteristic: INSDC status

text: Generic

text: transgenic line AH2

text: Agrostis stolonifera var. palustris

text: Agrostis stolonifera var. palustris DNA transgenic line AH2


text: Kansas State University

text: live

text: Generic

characteristic: NCBI submission model

text: transgenic line UH1

text: Agrostis stolonifera var. palustris

text: Agrostis stolonifera var. palustris DNA transgenic line UH1


text: Kansas State University

text: live

text: Generic

characteristic: NCBI submission package

text: transgenic line UH4

text: Agrostis stolonifera var. palustris

text: Agrostis stolonifera var. palustris DNA transgenic line UH4


text: Kansas State University

text: live

text: Generic

text: transgenic line UH5

text: Agrostis stolonifera var. palustris

characteristic: organism

text: Agrostis stolonifera var. palustris DNA transgenic line UH5


text: Kansas State University

text: live

text: Generic

text: transgenic line UH6

text: Agrostis stolonifera var. palustris

text: Agrostis stolonifera var. palustris DNA transgenic line UH6

characteristic: title


text: Kansas State University

text: live

text: Generic

text: transgenic line UH7

text: Agrostis stolonifera var. palustris

text: Agrostis stolonifera var. palustris DNA transgenic line UH7


text: Kansas State University

text: live

text: Generic

text: transgenic line UH8

text: Agrostis stolonifera var. palustris

text: Agrostis stolonifera var. palustris DNA transgenic line UH8


text: Kansas State University

text: live

text: Generic

text: transgenic line UH10

text: Agrostis stolonifera var. palustris

text: Agrostis stolonifera var. palustris DNA transgenic line UH10


text: Kansas State University

text: live

text: Generic

text: transgenic line PG1

text: Agrostis stolonifera var. palustris

text: Agrostis stolonifera var. palustris DNA transgenic line PG1


text: Kansas State University

text: live

text: Generic

text: transgenic line PG2

text: Agrostis stolonifera var. palustris

text: Agrostis stolonifera var. palustris DNA transgenic line PG2


text: Kansas State University

text: live

text: Generic

text: transgenic line PG4

text: Agrostis stolonifera var. palustris

text: Agrostis stolonifera var. palustris DNA transgenic line PG4


text: Kansas State University

text: live

text: Generic

text: transgenic line UH3

text: Agrostis stolonifera var. palustris

text: Agrostis stolonifera var. palustris DNA transgenic line UH3


text: Kansas State University

text: live

text: Generic

text: transgenic line UH9

text: Agrostis stolonifera var. palustris

text: Agrostis stolonifera var. palustris DNA transgenic line UH9


text: Kansas State University

text: live

text: Generic

text: Agrostis stolonifera var. palustris

text: Agrostis stolonifera var. palustris DNA


text: University of Liverpool

text: live

text: Generic

text: Burkholderia pseudomallei

text: Burkholderia pseudomallei DNA (Winstanley C)


text: Tokyo Medical and Dental University

text: live

text: Generic

text: Gallus gallus

text: Gallus gallus DNA (Ono R)


text: Lawrence Berkeley National Laboratory

text: live

text: Generic

text: These are the DNA sequences flanking the insertion sites of a collection of piggyBac transposon insertion mutants of Drosophila melanogaster. These mutants were produced by Brian C. Ring and Dan Garza. The transposon vector is PBac{5HPw+} (FlyBase ID: FBtp0016567). For further information on the vector and mutagenesis screen, see the PhD dissertation of Brian Ring (Ring, Brian C., 'Functional Analysis of the Drosophila Genome Using Transposable Elements'. Florida State University. 2001) and a personal communication from Brian Ring and Dan Garza available from FlyBase (FlyBase ID: FBrf0159884). Sequences flanking the insertion site of a subset of the collection of mutants were determined at the Lawrence Berkeley National Laboratory as described by Bellen et al. 2004 (Genetics 167: 761-781; FlyBase ID: FBrf0179132). Note that there are strain name aliases for each mutant. These names begin with an 'A' or 'B' followed by a three-digit number.

characteristic: description

text: Drosophila melanogaster

text: PA mutant piggyBac transposon insertion site flanking sequence


text: Lawrence Berkeley National Laboratory

text: live

text: Generic

text: These are the DNA sequences flanking the insertion sites of a collection of piggyBac transposon insertion mutants of Drosophila melanogaster. These mutants were produced by Brian C. Ring and Dan Garza. The transposon vector is PBac{3HPy+} (FlyBase ID: FBtp0016566). For further information on the vector and mutagenesis screen, see the PhD dissertation of Brian Ring (Ring, Brian C., 'Functional Analysis of the Drosophila Genome Using Transposable Elements'. Florida State University. 2001) and a personal communication from Brian Ring and Dan Garza available from FlyBase (FlyBase ID: FBrf0159884). Sequences flanking the insertion site of a subset of the collection of mutants were determined at the Lawrence Berkeley National Laboratory as described by Bellen et al. 2004 (Genetics 167: 761-781; FlyBase ID: FBrf0179132). Note that there are strain name aliases for each mutant. These names begin with a 'C' followed by a three-digit number.

text: Drosophila melanogaster

text: PC mutant piggyBac transposon insertion site flanking sequence


text: Melaka Institute of Biotechnology

text: live

text: Generic

text: Somatic

characteristic: cell type

text: The genomic DNA of Elaeis oleifera was digested with EcoRI restriction enzyme, and generated EcoRI fragments were cloned into Lambda ZAP-II cloning vector. Cloning of the generated and purified EcoRI fragments, and packaging was completed following guidelines and the protocols given by the Lambda ZAP-II vector supplier (Stratagene).

text: Young

characteristic: dev-stage

text: Elaeis oleifera

text: Leaf

text: Oil palm Eo gDNA-Lambda ZAP-II Library (GDLO)

text: Lambda ZAP-II


text: Kumamoto University

text: live

text: Generic

text: embryonic stem cell

text: ES cells, TT2

characteristic: cell-line

text: Cell line ID: 8-108

text: Mus musculus

text: male

characteristic: strain

text: Mus musculus ES cells, TT2

text: pU-Hachi


text: INRA and Universite Victor Segalen Bordeaux2

text: live

text: Generic

text: Catharanthus roseus cv. Cooler

characteristic: lab-host

text: Candidatus Phytoplasma solani

text: Candidatus Phytoplasma solani DNA


text: Yellow Sea Fisheries Research Institute

text: live

text: Generic

text: Penaeus chinensis

text: Fenneropenaeus chinensis AFLP fragments


text: Roslin Institute

text: live

text: Generic

text: Cloning site HindIII

text: Gallus gallus

text: Female

text: White Leghorn

text: Texas A&M Wageningen Chicken BAC Library

characteristic: vector


characteristic: External Id

text: Penn State University

text: live

text: Generic

text: Liriodendron tulipifera

text: Liriodendron tulipifera L. genemoc BAC library LT__Ba


text: Penn State University

characteristic: INSDC center name

text: live

text: Generic

text: Liriodendron tulipifera

text: Liriodendron tulipifera L. genemoc shotgun library LT_Sa


text: University of Pennsylvania School of Medicine

text: live

text: Generic

text: HOS-siL (HOS transduced with a retroviral construct containing a shRNA targeting LEDGF/p75)

text: Sequences cloned using TOPO vectors.

text: Homo sapiens

text: Human Integration Site Library-Ciuffi-HIV-HOS-siL


text: live

text: Generic

text: Jurkat-siJK2BC (Jurkat stably transfected with a shRNA targeting LEDGF/p75 and backcomplemented with a LEDGF/p75 expression vector)

text: Sequences cloned using TOPO vectors.

text: Homo sapiens

text: Human Integration Site Library-Ciuffi-HIV-Jurkat-BCsiJK2


text: live

text: Generic

text: Jurkat-siJK2 (Jurkat stably transfected with a shRNA targeting LEDGF/p75)

text: Sequences cloned using TOPO vectors.

text: Homo sapiens

text: Human Integration Site Library-Ciuffi-HIV-Jurkat-siJK2


text: live

text: Generic

text: HOS-U6 (HOS transduced with an empty retroviral construct)

text: Sequences cloned using TOPO vectors.

text: Homo sapiens

text: Human Integration Site Library-Ciuffi-HIV-HOS-U6


text: live

text: Generic

text: 293TdKD (293T stably transfected with 2 shRNAs targeting LEDGF/p75 and HRP2)

text: Sequences cloned using TOPO vectors.

text: Homo sapiens

text: Human Integration Site Library-Ciuffi-HIV-293T-dKD


text: live

text: Generic

text: 293TsiLL (293T stably transfected with 2 shRNAs targeting LEDGF/p75)

text: Sequences cloned using TOPO vectors.

text: Homo sapiens

text: Human Integration Site Library-Ciuffi-HIV-293T-siLL


text: live

text: Generic

text: 293TsiScram (293T stably transfected with a scramble shRNA)

text: Sequences cloned using TOPO vectors.

text: Homo sapiens

text: Human Integration Site Library-Ciuffi-HIV-293T-siScram


text: live

text: Generic

text: Sequences cloned using TOPO vectors.

text: Homo sapiens

text: Human Integration Site Library-Ciuffi-HIV-293t-wt


text: live

text: Generic

text: growth-arrested IMR-90 lung fibrobasts

text: Sequences cloned using TOPO vectors.

text: Homo sapiens

text: Human Integration Site Library-Ciuffi-HIV-IMR9nondiv


text: Virginia Bioinformatics Institute

text: live

text: Generic

text: E. coli

text: Phytophthora sojae

text: HindIII or BamHI

text: HindIII or BamHI

text: VTPS

text: BAC

text: pBeloBAC11 and pECBAC1


text: Open Biosystems, Inc.

text: live

text: Generic

text: Chlamydomonas reinhardtii


text: Scottish Crop Research Institute

text: live

text: Generic

text: Rubus idaeus subsp. idaeus

text: Rubus idaeus subsp. idaeus DNA


text: Konkuk University

text: live

text: Generic

text: Artemisia iwayomogi

text: Artemisia iwayomogi DNA


text: Max-Planck-Institut fuer biophysikalische Chemie

text: live

text: Generic

text: Drosophila melanogaster

text: Drosophila melanogaster DNA (Schaefer U)


text: Centro de Pesquisa Rene Rachou

text: live

text: Generic

text: Schistosoma mansoni

text: Schistosoma mansoni DNA (Rodrigues NB)


text: USDA, ARS, US Meat Animal Research Center

text: live

text: Generic

text: BAC DNA was sheared by nebulization, sized to 1500-3000 bp and subcloned into pBLUESCRIPT SK-.

text: Sus scrofa

text: EcoRV

text: EcoRV

text: Female

characteristic: sex

text: Blood

characteristic: tissue-type

text: CHORI-242-203C8 sheared

text: pBLUESCRIPT SK-


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: BAC DNA was digested with BamHI, sized to greater than 500 bp and subcloned into pBLUESCRIPT SK-.

text: Sus scrofa

text: BamHI

text: BamHI

text: Female

text: Blood

text: CHORI-242-264H20 BamHI

text: pBLUESCRIPT SK-


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: BAC DNA was digested with HindIII, sized to greater than 500 bp and subcloned into pBLUESCRIPT SK-.

text: Sus scrofa

text: HindIII

text: HindIII

text: Female

text: Blood

text: CHORI-242-264H20 HindIII

text: pBLUESCRIPT SK-


text: live

text: Generic

characteristic: NCBI submission package

text: Sus scrofa

characteristic: organism

text: HindIII

text: HindIII

text: Female

text: Blood

text: CHORI-242-319P22 HindIII

text: pBLUESCRIPT SK-


text: live

text: Generic

characteristic: description

text: Sus scrofa

text: BamHI

text: BamHI

text: Female

text: Blood

text: CHORI-242-319P22 BamHI

characteristic: title

text: pBLUESCRIPT SK-


text: live

text: Generic

text: Sus scrofa

text: HindIII

text: HindIII

text: Female

text: Blood

text: CHORI-242-226I21 HindIII

text: pBLUESCRIPT SK-


text: live

text: Generic

text: Sus scrofa

text: BamHI

text: BamHI

text: Female

text: Blood

text: CHORI-242-226I21 BamHI

text: pBLUESCRIPT SK-


text: live

text: Generic

text: Sus scrofa

text: HindIII

text: HindIII

text: Female

text: Blood

text: CHORI-242-203C8 HindIII

text: pBLUESCRIPT SK-


text: live

text: Generic

text: Sus scrofa

text: BamHI

text: BamHI

text: Female

text: Blood

text: CHORI-242-203C8 BamHI

text: pBLUESCRIPT SK-


text: live

text: Generic

text: Sus scrofa

text: BamHI

text: BamHI

text: Female

text: Blood

text: CHORI-242-315D4 BamHI

text: pBLUESCRIPT SK-


text: live

text: Generic

text: Sus scrofa

text: HindIII

text: HindIII

text: Female

text: Blood

text: CHORI-242-315D4 HindIII

text: pBLUESCRIPT SK-


text: Ben-Gurion University of The Negev, The Jacob Blaustein Institute for desert Research

text: live

text: Generic

text: flowering

characteristic: dev-stage

text: leaf

characteristic: organ

text: Mercurialis annua

text: female and male

text: includes all tissues of the leaf

text: Mercurialis annua female and male

text: plasmid

text: pT-Adv.


text: live

text: Generic

text: flowering

text: leaf

text: Mercurialis annua

text: female

text: includes all tissues of the leaf

text: Mercurialis annua female

text: plasmid

text: pT-Adv.


text: Michigan State University

text: live

text: Generic

characteristic: cultivar

text: Amplified genomic fragment

text: Asparagus officinalis

text: A. officinalis, A19, genomic sequence

text: Plasmid

text: pGEMT-easy


text: Michigan State University

text: live

text: Generic

text: Amplified genomic fragment

text: Asparagus officinalis

text: A. officinalis doubled haploid, G769, genomic sequence

text: Plasmid

text: pGEMT-easy


text: Michigan State University

text: live

text: Generic

text: Amplified genomic fragment

text: Asparagus setaceus

text: A. plumosus genomic sequence

text: Plasmid

text: pGEMT-easy


text: Kansas State University

text: live

text: Generic

text: young shoot

text: Triticum aestivum

text: Chinese Spring

characteristic: strain

text: whole plant

text: 1188HC library


text: Kansas State University

text: live

text: Generic

text: young shoot

text: Triticum aestivum

text: Chinese Spring

text: whole plant

text: 1639HC library


text: Oregon State University Department of Horticulture

text: live

text: Generic

text: OSU 414.062

text: RAPD marker linked to eastern filbert blight resistance

text: Corylus avellana

text: RAPD markers for EFB resistance


text: National Centre for Plant Genome Research

text: live

text: Generic

text: whole organ

characteristic: cell type

text: genomic DNA of the Jeevanraksha-2 cultivar of Artemisia annua was amplified with the Random primer and the bands of different sizes were cloned.

text: Adult

text: E.coli DH5alpha

characteristic: lab-host

text: Artemisia annua

text: bisexual

text: jeevan raksha-2

text: Leaf

text: Artemisia annua RAPD clone strain Jeevan raksha-2

text: Plasmid

text: pGEMT

characteristic: vector


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: whole organ

text: genomic DNA of the Suraksha cultivar of Artemisia annua was amplified with the Random primer and the bands of different sizes were cloned in pGEMT vector.

text: Adult

text: E.coli DH5alpha

text: Artemisia annua

text: bisexual

characteristic: sex

text: Suraksha

text: Leaf

text: Artemisia annua RAPD clone strain suraksha

text: Plasmid

text: pGEMT


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: whole organ

text: genomic DNA library of C.roseus cloned at pstI site in pUC19 vector.

text: Adult

text: E.coli DH5alpha

text: Catharanthus roseus

text: pstI

text: pstI

text: bisexual

text: Nirmal

text: Leaf

characteristic: tissue-type

text: Catharanthus roseus genomic Library strain nirmal

text: Plasmid


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: whole organ

text: Genomic DNA of the lli mutant was amplified with the Random primer and the bands of different sizes were cloned in T-vector.

text: Adult

text: E.coli DH5alpha

text: Catharanthus roseus

text: bisexual

text: lli

text: Leaf

text: Catharanthus roseus RAPD clone Library strain lli

text: Plasmid

text: pGEMT


text: live

text: Generic

text: whole organ

text: Genomic DNA of the Catharanthus roseus mutants of the cultivar Nirmal t was amplified with the Random Primer and the bands showing either common size or specific for the particular mutant strain were cloned in T-vector.

characteristic: description

text: Adult

text: E.coli DH5alpha

text: Catharanthus roseus

characteristic: organism

text: bisexual

text: Nirmal

text: Leaf

text: RAPD clone of Catharanthus roseus mutants of the cultivar Nirmal

characteristic: title

text: Plasmid

text: pGEMT


text: live

text: Generic

text: whole organ

text: Genomic DNA of the Pink Delhi cultivar was amplified with the random primer and the bands of different sizes were cloned in T-vector.

text: Adult

characteristic: dev-stage

text: E.coli DH5alpha

text: Catharanthus roseus

text: bisexual

text: Pink Delhi

text: Leaf

text: Catharanthus roseus RAPD clone library strain Pink Delhi

text: Plasmid

text: pGEMT


text: live

text: Generic

text: Spironucleus barkhanus

text: ATCC 50380

characteristic: strain

text: Spironucleus TOPO GSS Library


text: Institute of Genetics and Developmental Biology, Chinese Academy of Sciences

text: live

text: Generic

text: lymphocyte

characteristic: cell type

text: TransforMax E.coli EPI300 (Epicentre,Madison)

text: Ovis aries

text: Hind III

text: male

text: Chinese fine-wool Merino

text: blood

text: IGDB-ShBAC

text: Bacterial artificial chromosome


text: Research Institute for the Biology of Farm Animals (FBN)

text: live

text: Generic

text: Genomic DNA from microdissected bovine chromosome 6 fragments were amplified by DOP-PCR and cloned into pRCR-Script, see Weikard et al. Mamm Genome 8:836-840, 1997

text: Bos taurus

text: Bos taurus microdissection library for BTA6

text: Plasmid

text: pPCR-Script Amp SK(+)


text: University of Montana

text: live

text: Generic

text: representational difference analysis fragment

text: Kutztown, PA USA

characteristic: isolate

text: Gigaspora gigantea

text: Gigaspora gigantea RDA


text: Murdoch University

text: live

text: Generic

characteristic: cultivar

text: Lupinus angustifolius

text: Leaf and Stem

text: Lupinus angustifolius 83A:476 genomic intron sequences


characteristic: External Id

text: Murdoch University

text: live

text: Generic

text: Lupinus angustifolius

text: Leaf and Stem

text: Lupinus angustifolius P27255 genomic intron sequences


text: The University of Western Australia

characteristic: INSDC center name

text: live

text: Generic

text: Lupinus angustifolius

text: Leaf and Stem

text: Lupinus angustifolius genic microsatellite sequences


text: University of British Columbia

text: live

text: Generic

text: Reverse-transcribed shotgun library sequences from in situ communities of marine RNA viruses

text: uncultured marine RNA virus

text: B.C. marine RNA virus community


text: Clemson University

text: live

text: Generic

text: Maxxa

text: For more details on library preparation and sequence analysis see http://www.genome.clemson.edu/projects/cotton/stc/ To order clones from this library see http://www.genome.clemson.edu/orders

text: E. coli

characteristic: lab-host

text: Gossypium hirsutum

text: HindIII

text: NotI

text: Young leaves

text: Plasmid

characteristic: vector


text: Institute of Forest Genetics and Tree Breeding

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Genomic DNA of Casaurina equisetifolia was cross amlipfied with SSR primers develoed for eucalypts species. The PCR products were cloned in pPCR-Scrit Amp SK(+) cloning vector following the manufacturer's instructions (Stratagene, Catalogue #211190). Selected colonies were used for sequencing with reverse or forward M13 sequencing primer.The vector sequences were removed by BLASTN search against the plasmid sequence of pPCR-Script Amp SK (+) cloning vector.

text: Casuarina equisetifolia

text: male

characteristic: sex

text: needle

text: Casuarina equisetifolia SSR library

text: Plasmid

text: pPCR-Script Amp SK(+)


text: Murdoch University

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Lens culinaris subsp. culinaris

text: Leaf and Stem

characteristic: tissue-type

text: Lens culinaris ssp. culinaris genomic intron sequences, ILL5588 (Northfield)


text: Murdoch University

text: live

text: Generic

characteristic: NCBI submission package

text: Lens culinaris subsp. culinaris

characteristic: organism

text: Leaf and Stem

text: Lens culinaris ssp. culinaris genomic intron sequences, ILL5722 (Digger)


text: Murdoch University

text: live

text: Generic

text: Lens culinaris subsp. culinaris

text: Leaf and Stem

text: Lens culinaris ssp. culinaris genomic intron sequences, ILL6002 (Indian Head)

characteristic: title


text: Murdoch University

text: live

text: Generic

text: Lens culinaris subsp. culinaris

text: Leaf and Stem

text: Lens culinaris ssp. culinaris genomic intron sequences, ILL7537


text: University of Georgia, Center for Applied Genetic Technologies

text: live

text: Generic

text: Gossypium arboreum

text: Leaf


text: live

text: Generic

text: Gossypium herbaceum

text: Leaf


text: live

text: Generic

text: Gossypioides kirkii

text: Leaf


text: live

text: Generic

text: Gossypium raimondii

text: Leaf


text: live

text: Generic

text: Gossypium sturtianum

text: Leaf


text: live

text: Generic

text: Gossypium trilobum

text: Leaf


text: University of Pennsylvania

text: live

text: Generic

text: Lymphocytes

text: RPCI11 Human Male BAC Library

characteristic: description

text: Homo sapiens

text: EcoRI

text: EcoRI

text: Male

text: BAC


text: University of Milano

text: live

text: Generic

text: fibroblast

characteristic: cell type

text: Holstein bull; INRA Bovine BAC library (Male) produced by Andre Eggen

text: Bos taurus

text: HindIII

text: Male

text: breed: Holstein

characteristic: strain

text: INRA bovine BAC


text: Agriculture and Agri-Food Canada

text: live

text: Generic

text: Chiifu

characteristic: cultivar

text: Brassica rapa spp. pekinensis inbred line Chiifu BAC library (KBrH BAC) is provided by Yong-Pyo Lim.

text: E.coli DH10B

text: Brassica rapa subsp. pekinensis

text: HindIII

text: young leaves

text: KBrH, Brassica rapa HindIII BAC library

text: BAC


characteristic: External Id

text: School of Public Health, University of Michigan

text: live

text: Generic

text: Genomic subtraction methods

text: Escherichia coli

text: Pme I

text: Xba I

text: Escherichia

text: Plasmid


text: Duke University Biology Department

characteristic: INSDC center name

text: live

text: Generic

text: SAD12, Gunnison County, CO, USA

text: pBluestar plasmid exicision product from the lambdaBluestar lambda-vector system.

characteristic: isolate

text: Boechera stricta

text: BamHI

text: BamHI

text: hermaphrodite

text: Plasmid

text: pBluestar


text: University of Hawaii at Manoa

text: live

text: Generic

text: SunUp

text: Ming et al (2001) Theor Appl Genet 102:892-899.

text: E. coli DH10B

characteristic: lab-host

text: young leaves

characteristic: organ

text: Carica papaya

text: HindIII

text: hermaphrodite

text: Papaya Genomic DNA BAC Library

text: BAC

characteristic: vector


text: Murdoch University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Medicago truncatula

text: Leaf and Stem

text: Medicago truncatula A17 genomic sequences


text: Murdoch University

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Medicago truncatula

text: Leaf and Stem

text: Medicago truncatula Sa27063 genomic sequences


text: Murdoch University

text: live

text: Generic

characteristic: NCBI submission package

text: Medicago truncatula

text: Leaf and Stem

characteristic: tissue-type

text: Medicago truncatula Sa3054 genomic sequences


text: Rubber research institute, Chinese academy of tropical agricultural sciences

text: live

text: Generic

text: Hevea brasiliensis

characteristic: organism

text: Hevea brasiliensis RAPD fragment clone Library

characteristic: title


text: Auburn University

text: live

text: Generic

text: Blood

characteristic: cell type

text: The BAC library CHORI212 was constructed by Jim Thorsen and Dr. Baoli Zhu in Pieter de Jong's laboratory at BACPAC Resources, Children's Hospital Oakland Research Institute. Details can be found from http://bacpac.chori.org/library.php?id=103

characteristic: description

text: Mature

characteristic: dev-stage

text: Ictalurus punctatus

text: male

characteristic: sex

text: Blood


characteristic: External Id

text: Clemson University

characteristic: INSDC center name

text: live

text: Generic

text: PI 437654

characteristic: cultivar

text: Glycine max

text: Soybean PI 437654 BAC library GM_PBa

text: BAC