characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Adult 8 weeks

text: Stam lab

characteristic: biomaterial provider

text: Retina

text: Retina

text: mouse

text: M

text: DnaseSeq

text: DNaseI HS Sequencing

text: UW-m

characteristic: labexpid

text: Mus musculus

characteristic: organism

characteristic: replicate

text: Retina

characteristic: strain

characteristic: strain description


status: PUBLIC

text: ENCODE DCC

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

tag: attribute

characteristic: age

text: Adult 8 weeks

characteristic: age description

text: Stam Lab

text: mG/ER

characteristic: cell

text: MEL-GATA-1-ER, This is a mouse suspension cell line derived from MEL cells by stable transfection with a GATA-1-ER fusion protein construct as described by Choe et al., 2003 (Cancer Res 63, 6363-6369, 2003). These cells can be terminally differentiated into mature erythroid cells with ?-estradiol treatment

characteristic: cell description

text: mouse

characteristic: cell organism

text: M

characteristic: cell sex

text: DnaseSeq

characteristic: datatype

text: DNaseI HS Sequencing

characteristic: datatype description

text: UW-m

characteristic: lab

text: Stamatoyannopoulous - University of Washington

characteristic: lab description

text: 1,Hotspot-v5.2,lmax-v1.1,WindowDensity-bin20-win+/-75

characteristic: labversion

text: Mus musculus

text: mG/ER

text: C57 black 6, the most common inbred strain of laboratory mouse

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: immortalized

text: Immortal cells

text: ATCC

characteristic: biomaterial provider

text: fibroblast

text: mouse

text: M

text: DnaseSeq

text: DNaseI HS Sequencing

text: UW-m

characteristic: labexpid

text: 1,Hotspot-v5.2,Hotspot-v5.1,lmax-v1.1,WindowDensity-bin20-win+/-75

text: Mus musculus

characteristic: organism

characteristic: replicate

text: NIH/Swiss

characteristic: strain

text: An outbred Swiss mouse used as a general-purpose stock. Used extensively for pertussis HSF testing.

characteristic: strain description

text: UW_DnaseSeq_NIH-3T3_immortalized_NIH/Swiss


text: ENCODE DCC

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

text: Embryonic day 11.5

characteristic: age description

text: Selleri lab, Cornell

text: Mesoderm

characteristic: cell

text: axial somatic and lateral plate mesoderm from eviscerated headless, limbless embryos

characteristic: cell description

text: mouse

characteristic: cell organism

text: M

characteristic: cell sex

text: DnaseSeq

characteristic: datatype

text: DNaseI HS Sequencing

text: UW-m

text: Mus musculus

text: Mesoderm

text: Multipurpose mouse used for safety testing, aging studies, surgical models and pseudopregnancy.


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Embryonic day 11.5

text: Selleri lab, Cornell

characteristic: biomaterial provider

text: HindlimbBud

text: embryo hindlimb buds

text: mouse

text: M

text: DnaseSeq

text: DNaseI HS Sequencing

characteristic: datatype description

text: UW-m

characteristic: lab

characteristic: lab description

characteristic: labversion

text: Mus musculus

text: HindlimbBud

characteristic: title


text: ENCODE DCC

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

text: Adult 8 weeks

characteristic: age description

text: Stam Lab

text: mG/ER

text: mouse

text: M

text: DnaseSeq

text: DNaseI HS Sequencing

text: UW-m

characteristic: labexpid

text: Mus musculus

characteristic: organism

characteristic: replicate

text: mG/ER

characteristic: strain

characteristic: strain description

text: UW_DnaseSeq_mG/ER_adult-8wks_diffProtC_48hr_C57BL/6

characteristic: treatment

text: 48 hour differentiation time point of mG/ER cells towards red blood cells after treatment with estradiol. Estradiol 10^-7 M final concentration (Stam)

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Adult 8 weeks

text: Stam Lab

characteristic: biomaterial provider

text: mG/ER

characteristic: cell

characteristic: cell description

text: mouse

characteristic: cell organism

text: M

characteristic: cell sex

text: DnaseSeq

characteristic: datatype

text: DNaseI HS Sequencing

characteristic: datatype description

text: UW-m

characteristic: lab

text: Mus musculus

text: mG/ER

text: UW_DnaseSeq_mG/ER_adult-8wks_diffProtC_24hr_C57BL/6

text: 24 hour differentiation time point of mG/ER cells towards red blood cells after treatment with estradiol. Estradiol 10^-7 M final concentration (Stam)


text: ENCODE DCC

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

text: Adult 8 weeks

characteristic: age description

text: 1) LICR lab; 2)Stam Lab; 3)CSHL lab

text: tissue

characteristic: biomaterial type

text: mouse

text: DnaseSeq

text: DNaseI HS Sequencing

characteristic: donor id

text: UW-m

characteristic: lab description

characteristic: labexpid

characteristic: labversion

text: Mus musculus

characteristic: organism

characteristic: replicate

text: male

characteristic: sex

text: Spleen

characteristic: strain

text: Spleen

characteristic: tissue type

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Embryonic day 14.5

text: 1)Stam lab; 2)CSHL lab

characteristic: biomaterial provider

text: tissue

text: mouse

characteristic: cell organism

text: DnaseSeq

characteristic: datatype

text: DNaseI HS Sequencing

characteristic: datatype description

text: UW-m

characteristic: lab

text: Mus musculus

text: male

text: Liver

characteristic: strain description

text: liver


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

text: Embryonic day 18.5

characteristic: age description

text: 1)Stam lab; 2)CSHL lab

text: WholeBrain

characteristic: cell

text: Whole Brain

characteristic: cell description

text: mouse

text: M

characteristic: cell sex

text: DnaseSeq

text: DNaseI HS Sequencing

text: UW-m

characteristic: lab description

characteristic: labexpid

characteristic: labversion

text: Mus musculus

characteristic: organism

characteristic: replicate

text: WholeBrain


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Adult 8 weeks

text: 1)LICR lab; 2)CSHL lab

characteristic: biomaterial provider

text: tissue

characteristic: biomaterial type

text: mouse

characteristic: cell organism

text: DnaseSeq

characteristic: datatype

text: DNaseI HS Sequencing

characteristic: donor id

text: UW-m

text: Mus musculus

text: male

characteristic: sex

text: Thymus

characteristic: strain

text: thymus

characteristic: tissue type

characteristic: title


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

text: Adult 8 weeks

characteristic: age description

text: 1)Stam lab; 2)CSHL lab

text: LgIntestine

characteristic: cell

text: Large Intestine

characteristic: cell description

text: mouse

text: M

characteristic: cell sex

text: DnaseSeq

text: DNaseI HS Sequencing

characteristic: datatype description

text: UW-m

characteristic: lab

characteristic: lab description

characteristic: labexpid

characteristic: labversion

text: Mus musculus

characteristic: organism

text: LgIntestine

characteristic: strain description

text: UW_DnaseSeq_LgIntestine_adult-8wks_C57BL/6


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Embryonic day 0 (stem cell)

text: Stam lab

characteristic: biomaterial provider

text: ES-cells were originally isolated from 129S1/SVImJ mice by Swiatek PJ et al. in 1993 (Perinatal lethality and defects in hindbrain development in mice homozygous for a targeted mutation of the zinc finger gene Krox20. Swiatek PJ, Gridley T. Genes Dev. 1993 Nov,7(11):2071-84.)

text: mouse

characteristic: cell organism

text: M

text: DnaseSeq

characteristic: datatype

text: DNaseI HS Sequencing

text: UW-m

text: 1,Hotspot-v5.1,lmax-v1.0,WindowDensity-bin20-win+/-75

text: Mus musculus

characteristic: replicate

characteristic: strain

text: Control inbred strain of the steel-derived ES cells.


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

text: Newborn 1 day

characteristic: age description

text: Stam lab

text: Retina

characteristic: cell

text: Retina

characteristic: cell description

text: mouse

text: M

characteristic: cell sex

text: DnaseSeq

text: DNaseI HS Sequencing

characteristic: datatype description

text: UW-m

characteristic: lab

text: Mus musculus

text: Retina

text: UW_DnaseSeq_Retina_newborn-1days_C57BL/6

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Adult 8 weeks

text: Stam lab

text: SkMuscle

text: Skeletal Muscle

text: mouse

text: M

text: DnaseSeq

text: DNaseI HS Sequencing

text: UW-m

text: Stamatoyannopoulous - University of Washington

characteristic: lab description

characteristic: labexpid

characteristic: labversion

text: Mus musculus

characteristic: organism

text: SkMuscle

characteristic: strain description


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

text: Adult 8 weeks

characteristic: age description

text: Stam lab

characteristic: biomaterial provider

characteristic: cell

text: B Cell , CD19+

text: mouse

characteristic: cell organism

text: M

text: DnaseSeq

characteristic: datatype

text: DNaseI HS Sequencing

text: UW-m

text: Hotspot-v5.1,1,lmax-v1.1,2,WindowDensity-bin20-win+/-75,lmax-v1.0

text: Mus musculus

characteristic: replicate

characteristic: strain

text: UW_DnaseSeq_B-cell_(CD19+)_adult-8wks_C57BL/6


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: immortalized

text: Weissman lab

text: immortalized cell line

characteristic: biomaterial type

text: Leukemia (K562 analog)

characteristic: cell description

text: mouse

text: M

characteristic: cell sex

text: DnaseSeq

text: DNaseI HS Sequencing

characteristic: datatype description

text: UW-m

characteristic: lab

text: MEL

characteristic: line

text: Mus musculus

text: MEL

text: Unknown strain origin

characteristic: title


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

text: Adult 8 weeks

characteristic: age description

text: Stam lab

characteristic: biomaterial provider

text: T-Naive

characteristic: cell

text: Naive T cells: CD4+, CD25-

text: mouse

characteristic: cell organism

text: M

text: DnaseSeq

text: DNaseI HS Sequencing

text: UW-m

characteristic: lab description

characteristic: labexpid

text: Hotspot-v5.2,Hotspot-v5.1,1,lmax-v1.1,lmax-v1.0,WindowDensity-bin20-win+/-75

characteristic: labversion

text: Mus musculus

characteristic: organism

text: T-Naive

text: C57 black 6, the most common inbred strain of laboratory mouse

characteristic: strain description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Adult 8 weeks

text: 1)Stam lab ; 2)CSHL lab

text: Kidney

text: Kidney

characteristic: cell description

text: mouse

text: M

characteristic: cell sex

text: DnaseSeq

characteristic: datatype

text: DNaseI HS Sequencing

characteristic: datatype description

text: UW-m

text: 1,Hotspot-v5.1,lmax-v1.0,lmax-v1.1,WindowDensity-bin20-win+/-75

text: Mus musculus

characteristic: replicate

text: Kidney

characteristic: strain


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

text: Adult 8 weeks

characteristic: age description

text: 1)LICR lab; 2)CSHL lab

characteristic: biomaterial provider

text: Lung

characteristic: cell

text: Lung

text: mouse

characteristic: cell organism

text: M

text: DnaseSeq

text: DNaseI HS Sequencing

text: UW-m

characteristic: lab

characteristic: lab description

text: Mus musculus

text: Lung

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Adult 8 weeks

text: 1)Stam lab; 2)CSHL lab

text: tissue

characteristic: biomaterial type

text: mouse

text: DnaseSeq

text: DNaseI HS Sequencing

characteristic: donor id

text: UW-m

characteristic: labexpid

characteristic: labversion

text: Mus musculus

characteristic: organism

text: male

characteristic: sex

text: Liver

characteristic: strain description

text: liver

characteristic: tissue type


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: immortalized

characteristic: age

text: Immortal cells

characteristic: age description

text: Stam lab

characteristic: biomaterial provider

characteristic: cell

text: Mammary

characteristic: cell description

text: mouse

characteristic: cell organism

text: M

characteristic: cell sex

text: DnaseSeq

characteristic: datatype

text: DNaseI HS Sequencing

characteristic: datatype description

text: UW-m

characteristic: lab

text: Mus musculus

characteristic: replicate

text: RIII

characteristic: strain

text: High mammary tumor incidence in unfostered substrains.


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Embryonic day 14.5

text: 1)Stam lab; 2)CSHL lab

text: tissue

characteristic: biomaterial type

text: mouse

text: DnaseSeq

text: DNaseI HS Sequencing

characteristic: donor id

text: UW-m

characteristic: lab description

characteristic: labversion

text: Mus musculus

characteristic: organism

text: male

characteristic: sex

text: WholeBrain

characteristic: strain description

text: Whole Brain

characteristic: title


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

text: Adult 1 week

characteristic: age description

text: Stam lab

characteristic: biomaterial provider

text: Retina

characteristic: cell

text: Retina

characteristic: cell description

text: mouse

characteristic: cell organism

text: M

characteristic: cell sex

text: DnaseSeq

characteristic: datatype

text: DNaseI HS Sequencing

characteristic: datatype description

text: UW-m

characteristic: lab

characteristic: labexpid

text: 1,Hotspot-v5.2,lmax-v1.1,WindowDensity-bin20-win+/-75

text: Mus musculus

text: Retina


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Adult 8 weeks

text: Stam lab

text: Fibroblast

text: Fibroblast

text: mouse

text: M

text: DnaseSeq

text: DNaseI HS Sequencing

text: UW-m

characteristic: lab description

characteristic: labversion

text: Mus musculus

characteristic: organism

characteristic: replicate

text: Fibroblast

characteristic: strain

text: UW_DnaseSeq_Fibroblast_adult-8wks_C57BL/6


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

text: Adult 8 weeks

characteristic: age description

text: Stam lab

characteristic: biomaterial provider

text: TReg-Activated

characteristic: cell

text: Activated primary T regulatory cells, isolated ex vivo

characteristic: cell description

text: mouse

characteristic: cell organism

text: M

text: DnaseSeq

text: DNaseI HS Sequencing

text: UW-m

text: Mus musculus

text: TReg-Activated

characteristic: strain description

text: UW_DnaseSeq_TReg-Activated_adult-8wks_C57BL/6

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: ATCC

text: cervical carcinoma

text: cancer

characteristic: cell karyotype

text: ectoderm

characteristic: cell lineage

text: human

text: F

characteristic: cell sex

text: MethylSeq

characteristic: datatype

text: DNA Methyl Seq

characteristic: datatype description

text: HudsonAlpha

characteristic: lab

text: Myers - Hudson Alpha Institute for Biotechnology

characteristic: labexpid

text: Homo sapiens

text: hpa,msp

characteristic: restrictionenzyme


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: ATCC

characteristic: biomaterial provider

characteristic: cell

text: leukemia, The continuous cell line K-562 was established by Lozzio and Lozzio from the pleural effusion of a 53-year-old female with chronic myelogenous leukemia in terminal blast crises. - ATCC

characteristic: cell description

text: cancer

text: mesoderm

text: human

characteristic: cell organism

text: F

text: MethylSeq

text: DNA Methyl Seq

text: HudsonAlpha

characteristic: lab description

text: Homo sapiens

characteristic: organism

characteristic: replicate

text: hpa,msp


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM12891

text: B-lymphocyte, lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1463, treatment: Epstein-Barr Virus transformed

text: mesoderm

characteristic: cell lineage

text: human

text: M

text: MethylSeq

text: DNA Methyl Seq

text: HudsonAlpha

text: Homo sapiens

text: hpa,msp

characteristic: title


text: ENCODE DCC

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: ATCC

text: hepatocellular carcinoma

text: cancer

characteristic: cell karyotype

text: endoderm

text: human

text: M

characteristic: cell sex

text: MethylSeq

characteristic: datatype

text: DNA Methyl Seq

characteristic: datatype description

text: HudsonAlpha

characteristic: lab

characteristic: labexpid

text: Homo sapiens

text: hpa,msp

characteristic: restrictionenzyme


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: SRA accession

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM12892

characteristic: biomaterial provider

characteristic: cell

characteristic: cell description

text: mesoderm

text: human

characteristic: cell organism

text: F

text: MethylSeq

text: DNA Methyl Seq

text: HudsonAlpha

characteristic: lab description

text: Homo sapiens

characteristic: organism

characteristic: replicate

text: hpa,msp


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: WiCell Research Institute

text: embryonic stem cells

text: normal

text: inner cell mass

characteristic: cell lineage

text: human

text: M

text: MethylSeq

text: DNA Methyl Seq

text: HudsonAlpha

text: Homo sapiens

text: hpa,msp

characteristic: title


characteristic: External Id

text: ENCODE DCC

text: live

text: Generic

characteristic: SRA accession

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM12878

text: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus

text: normal

characteristic: cell karyotype

text: mesoderm

text: human

text: F

characteristic: cell sex

text: MethylSeq

characteristic: datatype

text: DNA Methyl Seq

characteristic: datatype description

text: HudsonAlpha

characteristic: lab

text: Homo sapiens

text: hpa,msp

characteristic: restrictionenzyme


text: HHMI/Boston Children's Hospital/Harvard Medical School

characteristic: INSDC center name

text: live

text: Generic

characteristic: antibody catalog number

characteristic: antibody lot number

text: Cell signaling Technology

characteristic: antibody manufacturer

characteristic: cell line

text: embryonbic stem cells

characteristic: cell type

characteristic: chip antibody

text: Control

characteristic: genotype

text: Mus musculus

characteristic: organism

text: Control mouse ES cells

text: inbred 129

characteristic: strain


characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Cell signaling Technology

text: embryonbic stem cells

text: Kdm2b knockdown

text: Mus musculus

text: Kdm2b knockdown mouse ES cells

text: inbred 129

characteristic: title


characteristic: INSDC center name

text: live

text: Generic

text: embryonbic stem cells

text: IgG

text: Control

text: Mus musculus

text: Control mouse ES cells

text: inbred 129


text: live

text: Generic

text: embryonbic stem cells

text: IgG

text: Kdm2b knockdown

text: Mus musculus

text: Kdm2b knockdown mouse ES cells

text: inbred 129


text: live

text: Generic

characteristic: antibody catalog number

text: Sigma

characteristic: antibody manufacturer

text: embryonbic stem cells

text: Flag

text: Control

text: Mus musculus

text: Control mouse ES cells

text: inbred 129


text: live

text: Generic

text: Sigma

characteristic: cell line

text: embryonbic stem cells

characteristic: cell type

text: Flag

text: Kdm2b knockdown

text: Mus musculus

text: Kdm2b knockdown mouse ES cells

text: inbred 129


Brucella abortus F3/01-300

text: Broad Institute

text: live

text: Generic

characteristic: collection date

text: Kosovo

characteristic: geo loc name

text: Brucella abortus F3/01-300

text: Bovine

characteristic: specific host

text: General Sample for Brucella abortus F3/01-300


T0 pH 5.7 chitin b

characteristic: External Id

text: University of Groningen

text: live

text: Generic

text: soil microcosm chitin amendment, native pH5.7, sampling time: day0

characteristic: description

text: soil metagenome

characteristic: organism

text: T0 pH 5.7 chitin b


T0 pH 5.7 chitin c

text: University of Groningen

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: soil metagenome

text: T0 pH 5.7 chitin c


T0 pH 5.7 a

text: University of Groningen

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: soil microcosm, native pH5.7, sampling time: day0

text: soil metagenome

text: T0 pH 5.7 a


T0 pH 5.7 b

text: University of Groningen

characteristic: INSDC center name

text: live

text: Generic

characteristic: SRA accession

text: soil metagenome

text: T0 pH 5.7 b

characteristic: title


text: UT Southwestern Medical Center

text: live

text: Generic

characteristic: cell line

text: Homo sapiens

text: nascent RNA

characteristic: rna subtype

characteristic: time


characteristic: GEO Accession

text: Gene Expression Omnibus

text: live

text: Generic

text: source: AC16

text: Homo sapiens

text: nascent RNA

text: GSM1014633: GRO-seq_TNFa_10m_AC16_1

text: TNFa

characteristic: treatment


characteristic: External Id

text: Gene Expression Omnibus

text: live

text: Generic

text: source: AC16

text: Homo sapiens

text: nascent RNA

text: GSM1014634: GRO-seq_TNFa_10m_AC16_2

text: TNFa


text: Gene Expression Omnibus

text: live

text: Generic

text: source: AC16

characteristic: description

text: Homo sapiens

text: nascent RNA

text: GSM1014635: GRO-seq_TNFa_30m_AC16_1

text: TNFa


text: Gene Expression Omnibus

text: live

text: Generic

text: source: AC16

text: Homo sapiens

characteristic: organism

text: nascent RNA

text: GSM1014636: GRO-seq_TNFa_30m_AC16_2

text: TNFa


text: UT Southwestern Medical Center

characteristic: INSDC first public

text: live

text: Generic

text: Homo sapiens

text: nascent RNA


text: Gene Expression Omnibus

characteristic: INSDC last update

text: live

text: Generic

text: source: MCF7

text: Homo sapiens

text: nascent RNA

text: GSM1014640: GRO-seq_E2_10m_MCF7_1


text: Gene Expression Omnibus

characteristic: INSDC secondary accession

text: live

text: Generic

text: source: MCF7

text: Homo sapiens

text: nascent RNA

text: GSM1014641: GRO-seq_E2_10m_MCF7_2


text: Gene Expression Omnibus

text: live

characteristic: INSDC status

text: Generic

text: source: MCF7

text: Homo sapiens

text: nascent RNA

text: GSM1014642: GRO-seq_E2_10m_MCF7_3


text: Gene Expression Omnibus

text: live

text: Generic

characteristic: NCBI submission model

text: source: MCF7

text: Homo sapiens

text: nascent RNA

text: GSM1014643: GRO-seq_E2_25m_MCF7_1


text: Gene Expression Omnibus

text: live

text: Generic

characteristic: NCBI submission package

text: source: MCF7

text: Homo sapiens

text: nascent RNA

text: GSM1014644: GRO-seq_E2_25m_MCF7_2


T0 pH 5.7 c

text: University of Groningen

characteristic: INSDC center name

text: live

text: Generic

text: soil metagenome

text: T0 pH 5.7 c


T0 pH 8.7 chitin a

text: University of Groningen

text: live

text: Generic

characteristic: SRA accession

text: soil microcosm chitin amendment, pH8.7, sampling time: day0

text: soil metagenome

text: T0 pH 8.7 chitin a


T0 pH 8.7 chitin b

text: University of Groningen

text: live

text: Generic

text: soil metagenome

text: T0 pH 8.7 chitin b

characteristic: title


T0 pH 8.7 chitin c

text: University of Groningen

text: live

text: Generic

text: soil metagenome

text: T0 pH 8.7 chitin c


T0 pH 8.7 a

text: University of Groningen

text: live

text: Generic

text: soil microcosm, pH8.7, sampling time: day0

text: soil metagenome

text: T0 pH 8.7 a


T0 pH 8.7 b

text: University of Groningen

text: live

text: Generic

text: soil metagenome

text: T0 pH 8.7 b


T0 pH 8.7 c

text: University of Groningen

text: live

text: Generic

text: soil metagenome

text: T0 pH 8.7 c


T3 pH 5.7 chitin a

text: University of Groningen

text: live

text: Generic

text: soil microcosm chitin amendment, native pH5.7, sampling time: day3

text: soil metagenome

text: T3 pH 5.7 chitin a


T3 pH 5.7 chitin b

text: University of Groningen

text: live

text: Generic

text: soil metagenome

text: T3 pH 5.7 chitin b


T3 pH 5.7 chitin c

text: University of Groningen

text: live

text: Generic

text: metagenome

text: T3 pH 5.7 chitin c


T3 pH 5.7 a

text: University of Groningen

text: live

text: Generic

text: soil microcosm, native pH5.7, sampling time: day3

text: soil metagenome

text: T3 pH 5.7 a


T3 pH 5.7 b

text: University of Groningen

text: live

text: Generic

text: soil metagenome

text: T3 pH 5.7 b


T3 pH 5.7 c

text: University of Groningen

text: live

text: Generic

text: soil metagenome

text: T3 pH 5.7 c


T3 pH 8.7 chitin a

text: University of Groningen

text: live

text: Generic

text: soil microcosm chitin amendment, pH8.7, sampling time: day3

text: soil metagenome

text: T3 pH 8.7 chitin a


T3 pH 8.7 chitin b

text: University of Groningen

text: live

text: Generic

text: soil metagenome

text: T3 pH 8.7 chitin b


T3 pH 8.7 chitin c

text: University of Groningen

text: live

text: Generic

text: soil metagenome

text: T3 pH 8.7 chitin c


T3 pH 8.7 a

text: University of Groningen

text: live

text: Generic

text: soil microcosm, pH8.7, sampling time: day3

text: soil metagenome

text: T3 pH 8.7 a


T3 pH 8.7 b

text: University of Groningen

text: live

text: Generic

text: soil metagenome

text: T3 pH 8.7 b


T3 pH 8.7 c

text: University of Groningen

text: live

text: Generic

text: soil metagenome

text: T3 pH 8.7 c


T7 pH 5.7 chitin a

text: University of Groningen

text: live

text: Generic

text: soil microcosm chitin amendment, native pH5.7, sampling time: day7

text: soil metagenome

text: T7 pH 5.7 chitin a


T7 pH 5.7 chitin b

text: University of Groningen

text: live

text: Generic

text: soil metagenome

text: T7 pH 5.7 chitin b


T7 pH 5.7 chitin c

text: University of Groningen

text: live

text: Generic

text: soil metagenome

text: T7 pH 5.7 chitin c


T7 pH 5.7 a

text: University of Groningen

text: live

text: Generic

text: soil microcosm, native pH5.7, sampling time: day7

text: soil metagenome

text: T7 pH 5.7 a


T7 pH 5.7 b

text: University of Groningen

text: live

text: Generic

text: soil metagenome

text: T7 pH 5.7 b


T7 pH 5.7 c

text: University of Groningen

text: live

text: Generic

text: soil metagenome

text: T7 pH 5.7 c


T7 pH 8.7 chitin a

text: University of Groningen

text: live

text: Generic

text: soil microcosm chitin amendment, native pH8.7, sampling time: day7

text: soil metagenome

text: T7 pH 8.7 chitin a


T7 pH 8.7 chitin b

text: University of Groningen

text: live

text: Generic

text: soil metagenome

text: T7 pH 8.7 chitin b


T7 pH 8.7 chitin c

text: University of Groningen

text: live

text: Generic

text: soil microcosm chitin amendment, pH8.7, sampling time: day7

text: soil metagenome

text: T7 pH 8.7 chitin c


T7 pH 8.7 a

text: University of Groningen

text: live

text: Generic

text: soil microcosm, pH8.7, sampling time: day7

text: soil metagenome

text: T7 pH 8.7 a


T7 pH 8.7 b

text: University of Groningen

text: live

text: Generic

text: soil metagenome

text: T7 pH 8.7 b


T7 pH 8.7 c

text: University of Groningen

text: live

text: Generic

text: soil metagenome

text: T7 pH 8.7 c


text: Kansas State University

text: live

text: Generic

text: This sample includes transcriptome sequencing data for 9 accessions sequenced by 454 and 20 accessions sequenced by Illumina (454_Kukri:SRR579514; 454_RAC875:SRR579515; 454_Excalibur:SRR579516; 454_CAP7:SRR579517; 454_CAP8:SRR579518; 454_CAP11:SRR579519; 454_CAP12:SRR579520; 454_CS:SRR579521; 454_Jagger:SRR579522; Illumina_AcBarrie:SRR579528 SRR831586; Illumina_Alsen:SRR831587; Illumina_Baxter:SRR831588; Illumina_Chara:SRR831589; Illumina_Excalibur:SRRSRR831590; Illumina_Kukri:SRR831591; Illumina_Pastor:SRR831690; Illumina_RAC875:SRR831691; Illumina_Westonia:SRR831703; Illumina_XIanyon54:SRR831704; Illumina_Volcani:SRR832836; Illumina_Yitpi:SRR832837; Illumina_Steele:SRR832838; Illumina_Stephens:SRR832839; Illumina_Truman:SRR832840; Illumina_Caledonia:SRR832841; Illumina_Grandin:SRR832842; Illumina_ID0444:SRR832843; Illumina_Jaypee:SRR832844; Illumina_Jupateco:SRR832845)

text: Triticum aestivum

text: Wheat transcriptom sequencing by 454 and Illumina


text: LMI, NHLBI, NIH

text: live

text: Generic

characteristic: cell type

text: Rabbit IgG (R&D Systems)

characteristic: chip antibody

text: Mus musculus

text: Th9 cells

characteristic: strain/background

text: spleen

characteristic: tissue

text: Th9 IgG


text: LMI, NHLBI, NIH

text: live

text: Generic

text: STAT5B (R&D Systems)

text: Mus musculus

text: Th9 cells, STAT5B ChIP

text: spleen

text: Th9 STAT5B


text: LMI, NHLBI, NIH

text: live

text: Generic

text: STAT6 (Santa Cruz, M-20, sc-981)

text: Mus musculus

text: Th9 cells, STAT6 ChIP

text: spleen

text: Th9 STAT6


text: LMI, NHLBI, NIH

text: live

text: Generic

text: wild type

characteristic: genotype/variation

text: Mus musculus

text: Th9 cells

text: spleen

text: Th9 WT RNASeq


characteristic: External Id

text: LMI, NHLBI, NIH

text: live

text: Generic

text: Mus musculus

text: Th9 cells

text: spleen

text: Th9 IL2KO RNASeq


DpRNAseq

text: UMASS Medical School

text: live

text: Generic

characteristic: collection-date

text: USA: Greenfield, Massachusetts

characteristic: geo loc name

characteristic: isolate

text: 42.98 N 73.00 W

characteristic: lat lon

text: Danaus plexippus plexippus

text: female

characteristic: sex

text: RNAseq reads for monarch transcriptome


text: Livestock Gentec, University of Alberta

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.eu

text: Simmental

characteristic: breed

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: eukaryote

characteristic: investigation type

text: Bos taurus

characteristic: organism

text: diploid

characteristic: ploidy

characteristic: project name

text: SIGNAL


text: Livestock Gentec, University of Alberta

characteristic: INSDC center name

text: live

text: MIGS.eu

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Simmental

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: GALANT

characteristic: title


characteristic: External Id

text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Simmental

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: WBL EXTRA 1A


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Simmental

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: BOLD


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Simmental

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: CANADIAN SALVATOR


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Simmental

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: SIR ARNOLD 809G


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Simmental

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: ROGANT


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Simmental

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: SALERIKA EVAN


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Simmental

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: EISENHERZ


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Simmental

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: ANTONIUS


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Simmental

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: UELI


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Simmental

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: STEWARD


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Simmental

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: KYKSO KALGER


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Simmental

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: RICKARDSTOWN JUMBO


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Simmental

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: KYKSO HADAU


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Simmental

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: BHR DOORN G629E


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Simmental

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: ELDORADO


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Simmental

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: LACOMBE ACHILLES


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Simmental

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: KINGFIELD ABRICOT


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Simmental

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: BEAT


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Simmental

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: ZAMUTO


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Simmental

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: HASALZ


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Simmental

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: CNS DREAM ON L186


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Simmental

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: REMINGTON RED LABEL HR


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Simmental

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: LANDRIDGE JET BLACK


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Composite

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Limousin

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: SEVEN FORTY SEVEN


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Limousin

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: LKCC TOMAHAWKS TOUCHDOWN


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Limousin

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: HARVEST OLYMPUS


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Limousin

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: WULFS RAMBLER 8400X


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Limousin

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: PUNCH


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Limousin

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: ANDERS POLL CASH


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Limousin

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: EDMOND


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Limousin

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: EROS


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Limousin

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: HARMONICA


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Limousin

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: FARFELU


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Limousin

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: TRAI POLLED SAVORY


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Limousin

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: HARD BALL


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Limousin

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: TMF LANDMARK 601L


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Limousin

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: SIRLOIN LANDMARK


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Limousin

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: GPFF BLAQUE RULON


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Limousin

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: WULFS NOBEL PRIZE 3861N


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Limousin

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: ROMN JUSTICE


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Limousin

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: MR SIRLOIN JAY


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Limousin

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: EMAIL


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Limousin

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: EL TORO


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Limousin

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: L7 LUCKY ME 9041J


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Limousin

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: EXLR POLLED AUSTIN 265J


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Limousin

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: EARTHQUAKE 93


text: Livestock Gentec, University of Alberta

text: live

text: MIGS.eu

text: Limousin

text: Keywords: GSC:MIxS;MIGS:5.0

text: eukaryote

text: Bos taurus

text: diploid

text: GIBUS


text: University of Georgia

text: live

text: Generic

text: TAMU

characteristic: cultivar

text: Reads are end-paired and can be identified by the clone or GSS# fields.

text: Sorghum propinquum

text: leaf

characteristic: tissue-type

text: S. propinquum genome: random shotgun sample

text: plasmid

characteristic: vector


text: University of Georgia

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Black Cheribon

text: Saccharum officinarum

text: S. officinarum genome: random shotgun sample

text: plasmid


text: University of Georgia

text: live

characteristic: INSDC status

text: Generic

text: Cenchrus americanus

text: leaf

text: P. glaucum genome: random shotgun sample

text: plasmid


text: San Jose State University

text: live

text: Generic

text: Metagenomic fosmid library constructed from activated wastewater

characteristic: description

text: uncultured bacterium

text: Activated Waste Water Metagenomic Library


Gut microbiota of Atlantic Cod

text: Prof. Dr. Kjetill S. Jakobsen

characteristic: INSDC secondary accession

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: host-associated

characteristic: biome

characteristic: collection date

text: Vertebrate intestines are home to a complex and variable microbial gut community. Members of these communities can be shared among different hosts, promoting the concept of a specific core gut microbiota that may be essential for normal gastrointestinal functionality. Most studies investigating this concept have focused on mammals, yet fish represent the majority of vertebrate diversity. Here we describe gut communities of Atlantic cod caught at a single location based on 16S rRNA amplicon sequences. We find that a limited number of OTUs is shared among all specimens. Moreover, the relative abundance of these shared OTUs varies several orders of magnitude among samples, leading to a tentative presence of these OTUs in some individuals at most. Considering our extensive sequencing effort, we find that a substantial core gut microbiota is not easily detected in Atlantic cod.

text: MIGS/MIMS/MIMARKS.host-associated

characteristic: env package

text: Fjord

characteristic: feature

text: Baltic Sea: Inner Oslo Fjord

characteristic: geo loc name

text: intestine

characteristic: host body habitat

text: Atlantic Cod

characteristic: host common name

text: no feeding for 7 days

characteristic: host diet

characteristic: host taxid

text: ambient

text: miens-survey

characteristic: investigation type

text: Gut microbiota

characteristic: label

text: 59.871278 N 10.587208 W

characteristic: lat lon

text: intestine

characteristic: material

text: gut metagenome

text: aerobic

text: Gut microbiota of Atlantic Cod

text: RNAlater treatment

characteristic: samp mat process

text: Refrigerator DNA extraction lab

text: +4 C

text: 11 specimens

characteristic: sample size

text: Gadus morhua

characteristic: specific host

text: 16S rRNA - V3 amplicon survey of gut microbiota in wild-caught Atlantic Cod (Gadus morhua).


Camel

characteristic: External Id

text: Anand Agricultural University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: metagenome

characteristic: organism

text: DROMEDARY CAMEL FORESTOMACH FLUID METAGENOMICS

characteristic: title


text: Genome Research Foundation

text: live

text: Generic

text: Homo sapiens


text: Blencowe, The Donnelly Centre, University of Toronto

text: live

text: Generic

text: adult

characteristic: age

text: mixed

characteristic: gender

text: poly-A enriched RNA

characteristic: molecule subtype

text: Mus musculus

characteristic: strain

text: brain

characteristic: tissue

text: Mouse brain rep1


text: live

text: Generic

text: adult

text: mixed

text: poly-A enriched RNA

text: Mus musculus

text: brain

text: Mouse brain rep2


text: live

text: Generic

text: adult

text: mixed

text: poly-A enriched RNA

text: Mus musculus

text: liver

text: Mouse liver


text: live

text: Generic

text: adult

text: mixed

text: poly-A enriched RNA

text: Mus musculus

text: kidney

text: Mouse kidney


text: live

text: Generic

text: adult

text: mixed

text: poly-A enriched RNA

text: Mus musculus

text: heart

text: Mouse heart


text: live

text: Generic

text: adult

text: mixed

text: poly-A enriched RNA

text: Mus musculus

text: Mouse_skeletal muscle_pooled

text: skeletal muscle

text: Mouse skeletal muscle


text: live

text: Generic

text: adult

text: mixed

text: poly-A enriched RNA

text: Gallus gallus

text: brain

text: Chicken brain


text: live

text: Generic

text: adult

text: mixed

text: poly-A enriched RNA

text: Gallus gallus

text: liver

text: Chicken liver


text: live

text: Generic

text: adult

text: mixed

text: poly-A enriched RNA

text: Gallus gallus

text: kidney

text: Chicken kidney


text: live

text: Generic

text: adult

text: mixed

text: poly-A enriched RNA

text: Gallus gallus

text: heart

text: Chicken heart


text: live

text: Generic

text: adult

text: mixed

text: poly-A enriched RNA

text: Gallus gallus

text: Chicken_skeletal muscle_pooled

text: skeletal muscle

text: Chicken skeletal muscle


text: live

text: Generic

text: adult

text: mixed

text: poly-A enriched RNA

text: Anolis carolinensis

text: brain

text: Lizard brain


text: live

text: Generic

text: adult

text: mixed

text: poly-A enriched RNA

text: Anolis carolinensis

text: kidney

text: Lizard kidney


text: live

text: Generic

text: adult

text: mixed

text: poly-A enriched RNA

text: Anolis carolinensis

text: heart

text: Lizard heart


text: live

text: Generic

text: adult

text: mixed

text: poly-A enriched RNA

text: Anolis carolinensis

text: Lizard_skeletal muscle_pooled

text: skeletal muscle

text: Lizard skeletal muscle


text: live

text: Generic

text: adult

text: mixed

text: poly-A enriched RNA

text: Xenopus tropicalis

text: brain

text: Frog brain


text: live

text: Generic

text: adult

text: mixed

text: poly-A enriched RNA

text: Xenopus tropicalis

text: liver

text: Frog liver


text: live

text: Generic

text: adult

text: mixed

text: poly-A enriched RNA

text: Xenopus tropicalis

text: kidney

text: Frog kidney


text: live

text: Generic

text: adult

text: mixed

text: poly-A enriched RNA

text: Xenopus tropicalis

text: heart

text: Frog heart


text: live

text: Generic

text: adult

text: mixed

text: poly-A enriched RNA

text: Xenopus tropicalis

text: Frog_skeletal muscle_pooled

text: skeletal muscle

text: Frog skeletal muscle


text: live

text: Generic

text: adult

text: mixed

text: poly-A enriched RNA

text: Tetraodon nigroviridis

text: brain

text: Pufferfish brain


Salbia medinalis

text: Guizhou University

text: live

text: Generic

text: The Rice Leaf Folder(Cnaphalocrocis medinalis) is a species of moth of the Crambidae family. It is found in south-east Asia, including Hong Kong, Sri Lanka, Taiwan, Thailand and most of Australia. The larvae are considered a pest on Zea mays, Oryza sativa and Triticum, Saccharum and Sorghum species.

characteristic: description

text: Cnaphalocrocis medinalis

text: Transcriptome and gene expression analysis of the rice leaf folder, Cnaphalocrocis medinalis


AU1 slurry

characteristic: External Id

text: The University of Akron

text: live

text: Generic

text: metagenome

text: Microbial communities associated with flue gas desulfurization systems AU1slurry


text: The University of Akron

characteristic: INSDC center name

text: live

text: Generic

text: metagenome

text: Microbial communities associated with wet flue gas desulfurization systems AU2slurry


AU2 scale

text: The University of Akron

characteristic: INSDC first public

text: live

text: Generic

text: metagenome

text: Microbial communities associated with wet flue gas desulfurization systems AU2scale


AU1 makeup

text: The University of Akron

characteristic: INSDC last update

text: live

text: Generic

text: metagenome

text: Microbial communities associated with wet flue gas desulfurization systems AU1makeup


A source

text: The University of Akron

characteristic: INSDC secondary accession

text: live

text: Generic

text: metagenome

text: Microbial communities associated with wet flue gas desulfurization systems Asource


BU1 slurry

text: The University of Akron

text: live

characteristic: INSDC status

text: Generic

text: metagenome

text: Microbial communities associated with wet flue gas desulfurization systems BU1slurry


BU2 slurry

text: The University of Akron

text: live

text: Generic

characteristic: NCBI submission model

text: metagenome

text: Microbial communities associated with wet flue gas desulfurization systems BU2slurry


BU2 scale

text: The University of Akron

text: live

text: Generic

characteristic: NCBI submission package

text: metagenome

text: Microbial communities associated with wet flue gas desulfurization systems BU2scale


BU1 reuse

text: The University of Akron

text: live

text: Generic

characteristic: SRA accession

text: metagenome

text: Microbial communities associated with wet flue gas desulfurization systems BU1 reuse


CU1 slurry

text: The University of Akron

text: live

text: Generic

text: metagenome

characteristic: organism

text: Microbial communities associated with wet flue gas desulfurization systems CU1slurry


CU2 slurry

text: The University of Akron

text: live

text: Generic

text: metagenome

text: Microbial communities associated with wet flue gas desulfurization systems CU2slurry

characteristic: title


CU1 makeup

text: The University of Akron

text: live

text: Generic

text: metagenome

text: Microbial communities associated with wet flue gas desulfurization systems CU1makeup


CU2 makeup

text: The University of Akron

text: live

text: Generic

text: metagenome

text: Microbial communities associated with wet flue gas desulfurization systems CU2makeup


DU1 slurry

text: The University of Akron

text: live

text: Generic

text: metagenome

text: Microbial communities associated with wet flue gas desulfurization systems DU1slurry


DU1 makeup

text: The University of Akron

text: live

text: Generic

text: metagenome

text: Microbial communities associated with wet flue gas desulfurization systems DU1 makeup


EU1 slurry

text: The University of Akron

text: live

text: Generic

text: metagenome

text: Microbial communities associated with wet flue gas desulfurization systems EU1slurry


rh2349 wk6

text: Ragon Institute of MGH, MIT and Harvard

text: live

text: Pathogen.vi-cl

text: Philip A Mudd

characteristic: collected-by

characteristic: collection date

text: USA: Wisconsin

characteristic: geo loc name

text: Simian immunodeficiency virus

characteristic: host-disease

text: plasma

characteristic: isolation source

text: Macaca mulatta

characteristic: lab-host

text: 43.071145 N 89.406939 W

characteristic: lat lon

text: Simian immunodeficiency virus

text: Macaca mulatta

characteristic: specific host

text: Viral, clinical or host-associated sample from Simian immunodeficiency virus


rh2355 wk6

characteristic: External Id

text: Ragon Institute of MGH, MIT and Harvard

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.vi-cl

text: Philip A Mudd

text: USA: Wisconsin

text: Simian immunodeficiency virus

text: plasma

text: Macaca mulatta

text: 43.071145 N 89.406940 W

text: Simian immunodeficiency virus

text: Macaca mulatta


rh2350 wk6

text: Ragon Institute of MGH, MIT and Harvard

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.vi-cl

text: Philip A Mudd

text: USA: Wisconsin

text: Simian immunodeficiency virus

text: plasma

text: Macaca mulatta

text: 43.071145 N 89.406941 W

text: Simian immunodeficiency virus

text: Macaca mulatta


rh2352 wk6

text: Ragon Institute of MGH, MIT and Harvard

text: live

text: Pathogen.vi-cl

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Philip A Mudd

text: USA: Wisconsin

text: Simian immunodeficiency virus

text: plasma

text: Macaca mulatta

text: 43.071145 N 89.406942 W

text: Simian immunodeficiency virus

text: Macaca mulatta


rh2357 wk6

text: Ragon Institute of MGH, MIT and Harvard

text: live

text: Pathogen.vi-cl

text: Philip A Mudd

text: USA: Wisconsin

text: Simian immunodeficiency virus

text: plasma

text: Macaca mulatta

text: 43.071145 N 89.406943 W

text: Simian immunodeficiency virus

characteristic: organism

text: Macaca mulatta


rh2361 wk6

text: Ragon Institute of MGH, MIT and Harvard

text: live

text: Pathogen.vi-cl

text: Philip A Mudd

text: USA: Wisconsin

text: Simian immunodeficiency virus

text: plasma

text: Macaca mulatta

text: 43.071145 N 89.406944 W

text: Simian immunodeficiency virus

text: Macaca mulatta

characteristic: title


rh2364 wk6

text: Ragon Institute of MGH, MIT and Harvard

text: live

text: Pathogen.vi-cl

text: Philip A Mudd

characteristic: collected-by

text: USA: Wisconsin

text: Simian immunodeficiency virus

text: plasma

text: Macaca mulatta

text: 43.071145 N 89.406945 W

text: Simian immunodeficiency virus

text: Macaca mulatta


rh2365 wk6

text: Ragon Institute of MGH, MIT and Harvard

text: live

text: Pathogen.vi-cl

text: Philip A Mudd

characteristic: collection date

text: USA: Wisconsin

text: Simian immunodeficiency virus

text: plasma

text: Macaca mulatta

text: 43.071145 N 89.406946 W

text: Simian immunodeficiency virus

text: Macaca mulatta


rh2351 wk6

text: Ragon Institute of MGH, MIT and Harvard

text: live

text: Pathogen.vi-cl

text: Philip A Mudd

text: USA: Wisconsin

characteristic: geo loc name

text: Simian immunodeficiency virus

text: plasma

text: Macaca mulatta

text: 43.071145 N 89.406947 W

text: Simian immunodeficiency virus

text: Macaca mulatta


rh2353 wk6

text: Ragon Institute of MGH, MIT and Harvard

text: live

text: Pathogen.vi-cl

text: Philip A Mudd

text: USA: Wisconsin

text: Simian immunodeficiency virus

characteristic: host-disease

text: plasma

text: Macaca mulatta

text: 43.071145 N 89.406948 W

text: Simian immunodeficiency virus

text: Macaca mulatta


rh2354 wk6

text: Ragon Institute of MGH, MIT and Harvard

text: live

text: Pathogen.vi-cl

text: Philip A Mudd

text: USA: Wisconsin

text: Simian immunodeficiency virus

text: plasma

characteristic: isolation source

text: Macaca mulatta

text: 43.071145 N 89.406949 W

text: Simian immunodeficiency virus

text: Macaca mulatta


rh2358 wk6

text: Ragon Institute of MGH, MIT and Harvard

text: live

text: Pathogen.vi-cl

text: Philip A Mudd

text: USA: Wisconsin

text: Simian immunodeficiency virus

text: plasma

text: Macaca mulatta

characteristic: lab-host

text: 43.071145 N 89.406950 W

text: Simian immunodeficiency virus

text: Macaca mulatta


rh2360 wk6

text: Ragon Institute of MGH, MIT and Harvard

text: live

text: Pathogen.vi-cl

text: Philip A Mudd

text: USA: Wisconsin

text: Simian immunodeficiency virus

text: plasma

text: Macaca mulatta

text: 43.071145 N 89.406951 W

characteristic: lat lon

text: Simian immunodeficiency virus

text: Macaca mulatta


rh2363 wk6

text: Ragon Institute of MGH, MIT and Harvard

text: live

text: Pathogen.vi-cl

text: Philip A Mudd

text: USA: Wisconsin

text: Simian immunodeficiency virus

text: plasma

text: Macaca mulatta

text: 43.071145 N 89.406952 W

text: Simian immunodeficiency virus

text: Macaca mulatta

characteristic: specific host


rh2366 wk6

characteristic: External Id

text: Ragon Institute of MGH, MIT and Harvard

text: live

text: Pathogen.vi-cl

text: Philip A Mudd

text: USA: Wisconsin

text: Simian immunodeficiency virus

text: plasma

text: Macaca mulatta

text: 43.071145 N 89.406953 W

text: Simian immunodeficiency virus

text: Macaca mulatta


rh2367 wk6

text: Ragon Institute of MGH, MIT and Harvard

characteristic: INSDC center name

text: live

text: Pathogen.vi-cl

text: Philip A Mudd

text: USA: Wisconsin

text: Simian immunodeficiency virus

text: plasma

text: Macaca mulatta

text: 43.071145 N 89.406954 W

text: Simian immunodeficiency virus

text: Macaca mulatta


rh2349 wk35

text: Ragon Institute of MGH, MIT and Harvard

characteristic: INSDC first public

text: live

text: Pathogen.vi-cl

text: Philip A Mudd

text: USA: Wisconsin

text: Simian immunodeficiency virus

text: plasma

text: Macaca mulatta

text: 43.071145 N 89.406955 W

text: Simian immunodeficiency virus

text: Macaca mulatta


rh2355 wk37

text: Ragon Institute of MGH, MIT and Harvard

characteristic: INSDC last update

text: live

text: Pathogen.vi-cl

text: Philip A Mudd

text: USA: Wisconsin

text: Simian immunodeficiency virus

text: plasma

text: Macaca mulatta

text: 43.071145 N 89.406956 W

text: Simian immunodeficiency virus

text: Macaca mulatta


rh2350 wk48

text: Ragon Institute of MGH, MIT and Harvard

text: live

characteristic: INSDC status

text: Pathogen.vi-cl

text: Philip A Mudd

text: USA: Wisconsin

text: Simian immunodeficiency virus

text: plasma

text: Macaca mulatta

text: 43.071145 N 89.406957 W

text: Simian immunodeficiency virus

text: Macaca mulatta


rh2352 wk48

text: Ragon Institute of MGH, MIT and Harvard

text: live

text: Pathogen.vi-cl

characteristic: NCBI submission model

text: Philip A Mudd

text: USA: Wisconsin

text: Simian immunodeficiency virus

text: plasma

text: Macaca mulatta

text: 43.071145 N 89.406958 W

text: Simian immunodeficiency virus

text: Macaca mulatta


rh2357 wk45

text: Ragon Institute of MGH, MIT and Harvard

text: live

text: Pathogen.vi-cl

characteristic: NCBI submission package

text: Philip A Mudd

text: USA: Wisconsin

text: Simian immunodeficiency virus

text: plasma

text: Macaca mulatta

text: 43.071145 N 89.406959 W

text: Simian immunodeficiency virus

text: Macaca mulatta


rh2361 wk48

text: Ragon Institute of MGH, MIT and Harvard

text: live

text: Pathogen.vi-cl

text: Philip A Mudd

text: USA: Wisconsin

text: Simian immunodeficiency virus

text: plasma

text: Macaca mulatta

text: 43.071145 N 89.406960 W

text: Simian immunodeficiency virus

characteristic: organism

text: Macaca mulatta


rh2364 wk45

text: Ragon Institute of MGH, MIT and Harvard

text: live

text: Pathogen.vi-cl

text: Philip A Mudd

text: USA: Wisconsin

text: Simian immunodeficiency virus

text: plasma

text: Macaca mulatta

text: 43.071145 N 89.406961 W

text: Simian immunodeficiency virus

text: Macaca mulatta

characteristic: title


rh2365 wk48

text: Ragon Institute of MGH, MIT and Harvard

text: live

text: Pathogen.vi-cl

text: Philip A Mudd

characteristic: collected-by

text: USA: Wisconsin

text: Simian immunodeficiency virus

text: plasma

text: Macaca mulatta

text: 43.071145 N 89.406962 W

text: Simian immunodeficiency virus

text: Macaca mulatta


text: Cell Biology, ErasmusMC

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: normal

characteristic: cell type

text: normal

characteristic: histology

text: Homo sapiens

text: lung ressection

text: normal lung

characteristic: tissue

text: normal 2213N_01


text: Cell Biology, ErasmusMC

text: live

text: Generic

text: squamous-cell carcinoma

text: nsclc

text: Homo sapiens

text: lung ressection

text: squamous-cell carcinoma tumor

text: squamous-cell carcinoma 2214T_01


text: Cell Biology, ErasmusMC

text: live

text: Generic

text: normal

text: normal

text: Homo sapiens

text: lung ressection

text: normal lung

text: normal 2235N_01


text: Cell Biology, ErasmusMC

text: live

text: Generic

text: squamous-cell carcinoma

text: nsclc

text: Homo sapiens

text: lung ressection

text: squamous-cell carcinoma tumor

text: squamous-cell carcinoma 2236T_01


text: Cell Biology, ErasmusMC

text: live

text: Generic

text: normal

text: normal

text: Homo sapiens

text: lung ressection

text: normal lung

text: normal 2245N_01


text: Cell Biology, ErasmusMC

text: live

text: Generic

text: adenocarcinoma

text: nsclc

text: Homo sapiens

text: lung ressection

text: adenocarcinoma tumor

text: adenocarcinoma 2246T_01


text: Cell Biology, ErasmusMC

text: live

text: Generic

text: normal

text: normal

text: Homo sapiens

text: lung ressection

text: normal lung

text: normal 2255N_01


text: Cell Biology, ErasmusMC

text: live

text: Generic

text: adenocarcinoma

text: nsclc

text: Homo sapiens

text: lung ressection

text: adenocarcinoma tumor

text: adenocarcinoma 2256T_01


text: Cell Biology, ErasmusMC

text: live

text: Generic

text: normal

text: normal

text: Homo sapiens

text: lung ressection

text: normal lung

text: normal 2257N_01


text: Cell Biology, ErasmusMC

text: live

text: Generic

text: adenocarcinoma

text: nsclc

text: Homo sapiens

text: lung ressection

text: adenocarcinoma tumor

text: adenocarcinoma 2258T_01


text: Cell Biology, ErasmusMC

text: live

text: Generic

text: normal

text: normal

text: Homo sapiens

text: lung ressection

text: normal lung

text: normal 2261N_01


text: Cell Biology, ErasmusMC

text: live

text: Generic

text: squamous-cell carcinoma

text: nsclc

text: Homo sapiens

text: lung ressection

text: squamous-cell carcinoma tumor

text: squamous-cell carcinoma 2262T_01


text: Cell Biology, ErasmusMC

text: live

text: Generic

text: normal

text: normal

text: Homo sapiens

text: lung ressection

text: normal lung

text: normal TB0022he_01


text: Cell Biology, ErasmusMC

text: live

text: Generic

text: large cell carcinoma

text: nsclc

text: Homo sapiens

text: lung ressection

text: large cell carcinoma tumor

text: large cell carcinoma TB0022tu_01


text: Cell Biology, ErasmusMC

text: live

text: Generic

text: normal

text: normal

text: Homo sapiens

text: lung ressection

text: normal lung

text: normal 2213N_02


text: Cell Biology, ErasmusMC

text: live

text: Generic

text: squamous-cell carcinoma

text: nsclc

text: Homo sapiens

text: lung ressection

text: squamous-cell carcinoma tumor

text: squamous-cell carcinoma 2214T_02


text: Cell Biology, ErasmusMC

text: live

text: Generic

text: normal

text: normal

text: Homo sapiens

text: lung ressection

text: normal lung

text: normal 2235N_02


text: Cell Biology, ErasmusMC

text: live

text: Generic

text: squamous-cell carcinoma

text: nsclc

text: Homo sapiens

text: lung ressection

text: squamous-cell carcinoma tumor

text: squamous-cell carcinoma 2236T_02


text: Cell Biology, ErasmusMC

text: live

text: Generic

text: normal

text: normal

text: Homo sapiens

text: lung ressection

text: normal lung

text: normal 2245N_02


text: Cell Biology, ErasmusMC

text: live

text: Generic

text: adenocarcinoma

text: nsclc

text: Homo sapiens

text: lung ressection

text: adenocarcinoma tumor

text: adenocarcinoma 2246T_02


text: Cell Biology, ErasmusMC

text: live

text: Generic

text: normal

text: normal

text: Homo sapiens

text: lung ressection

text: normal lung

text: normal 2255N_02


text: Cell Biology, ErasmusMC

text: live

text: Generic

text: adenocarcinoma

text: nsclc

text: Homo sapiens

text: lung ressection

text: adenocarcinoma tumor

text: adenocarcinoma 2256T_02


text: Cell Biology, ErasmusMC

text: live

text: Generic

text: normal

text: normal

text: Homo sapiens

text: lung ressection

text: normal lung

text: normal 2257N_02


text: Cell Biology, ErasmusMC

text: live

text: Generic

text: adenocarcinoma

text: nsclc

text: Homo sapiens

text: lung ressection

text: adenocarcinoma tumor

text: adenocarcinoma 2258T_02


text: Cell Biology, ErasmusMC

text: live

text: Generic

text: normal

text: normal

text: Homo sapiens

text: lung ressection

text: normal lung

text: normal 2261N_02


text: Cell Biology, ErasmusMC

text: live

text: Generic

text: squamous-cell carcinoma

text: nsclc

text: Homo sapiens

text: lung ressection

text: squamous-cell carcinoma tumor

text: squamous-cell carcinoma 2262T_02


text: Cell Biology, ErasmusMC

text: live

text: Generic

text: normal

text: normal

text: Homo sapiens

text: lung ressection

text: normal lung

text: normal TB0022he_02


text: Cell Biology, ErasmusMC

text: live

text: Generic

text: large cell carcinoma

text: nsclc

text: Homo sapiens

text: lung ressection

text: large cell carcinoma tumor

text: large cell carcinoma TB0022tu_02


text: Cell Biology, ErasmusMC

text: live

text: Generic

characteristic: cell line

text: cell line

text: Homo sapiens

text: MRC-5 cell line

text: MRC-5 MRC5


text: Cell Biology, ErasmusMC

text: live

text: Generic

text: Artificially fully methylated

text: Homo sapiens

text: MRC-5 cell line

text: MRC-5 MRC5-Met


text: Cell Biology, ErasmusMC

text: live

text: Generic

text: Artificially fully unmethylated

text: Homo sapiens

text: MRC-5 cell line

text: MRC-5 MRC5_UnMet


text: Cell Biology, ErasmusMC

text: live

text: Generic

text: normal

text: Artificially fully methylated

text: Homo sapiens

text: Universal Unmethylated DNA, Chemicon, Millipore

characteristic: sample type

text: normal UUD_Met


characteristic: External Id

text: Cell Biology, ErasmusMC

text: live

text: Generic

text: normal

text: Artificially fully unmethylated

text: Homo sapiens

text: normal UUD_UnMet


Primary MEFs

text: CNIO

characteristic: INSDC center name

text: live

text: Generic

text: Poly-A plus RNA from primary mouse embryonic fibroblasts

characteristic: description

text: Mus musculus

text: primary mouse embryonic fibroblasts


hnRNP A1-IP

text: CNIO

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Immunoprecipitated RNA isolated upon hnRNP A1-IP from nuclear extracts from MEFs

text: Mus musculus

text: hnRNP A1-IP from primary MEFs


Biotin pull down using TERRA antisense

text: CNIO

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: RNA isolated from nuclear extracts from pMEFs upon biotin pull down using a TERRA antisense as a bait

text: Mus musculus

text: Biotin pull down using a TERRA antisense as a bait


EF1A_bTEFAP reads

text: UPEI

text: live

text: Generic

characteristic: NCBI submission package

text: Bacteria bTEFAP reads from Eunicea fusca octocoral collected off the coast of Florida, USA

text: Eunicea fusca

characteristic: organism


HuR-IP

text: CNIO

text: live

text: Generic

text: Immunoprecipitated RNA isolated upon HuR-IP from nuclear extracts from pMEFs

text: Mus musculus

text: HuR-IP from primary MEFs

characteristic: title


text: CNIO

characteristic: INSDC secondary accession

text: live

text: Generic

text: Poly-A plus RNA from C2C12 mouse myoblast cell line

text: Mus musculus

text: C2C12 mouse myoblast cell line


text: CNIO

text: live

text: Generic

characteristic: SRA accession

text: Poly-A plus RNA from NS1 mouse myeloma cell line

text: Mus musculus

text: NS1 mouse myeloma cell line


text: University of Maryland School of Medicine, Institute for Genome Sciences

text: live

text: MIGS.ba

text: not determined

characteristic: age

text: Celera Assembler 6.1

characteristic: assembly

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

text: not determined

characteristic: environment (feature)

text: not determined

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: not determined

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: not determined

characteristic: number of replicons

text: Escherichia coli 2534-86

text: non-Human ETEC

characteristic: phenotype

text: Emerging Diarrheal Pathogens

characteristic: project name

text: not determined

characteristic: reference for biomaterial

characteristic: sequencing method

characteristic: serotype

text: not determined

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli 2534-86


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

text: not determined

text: Celera Assembler 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

text: not determined

text: not determined

text: not determined

text: not determined

text: not determined

text: not determined

text: Escherichia coli 3030-1

characteristic: organism

text: non-Human ETEC

text: Emerging Diarrheal Pathogens

text: not determined

text: not determined

text: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli 3030-1

characteristic: title


text: live

text: MIGS.ba

text: not determined

characteristic: age

text: Celera Assembler 6.0 beta

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

text: not determined

characteristic: environment (feature)

text: not determined

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: WHO Reference Center

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: not determined

characteristic: number of replicons

text: Escherichia coli STEC_94C

characteristic: phenotype

text: Emerging Diarrheal Pathogens

text: not determined

text: not determined

text: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli 94C


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS.ba

text: not determined

text: Celera Assembler 6.0 beta

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: not determined

text: not determined

text: WHO Reference Center

text: not determined

text: not determined

text: not determined

text: Escherichia coli O91:H21 str. B2F1

text: Emerging Diarrheal Pathogens

characteristic: project name

text: not determined

characteristic: reference for biomaterial

characteristic: sequencing method

characteristic: serotype

text: not determined

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli B2F1


text: live

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

text: not determined

characteristic: age

text: Celera Assembler 6.0 beta

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

text: not determined

characteristic: environment (feature)

text: not determined

characteristic: environment (material)

text: WHO Reference Center

text: not determined

text: not determined

text: not determined

text: Escherichia coli STEC_C165-02

characteristic: organism

text: Emerging Diarrheal Pathogens

text: not determined

text: not determined

text: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli C165-02

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS.ba

text: not determined

text: Celera Assembler 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: human-associated habitat [ENVO:00009003]

text: not determined

characteristic: finishing strategy (depth of coverage)

text: United Kingdom

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: not determined

characteristic: number of replicons

text: Escherichia coli DEC10A

text: not determined

characteristic: phenotype

text: Emerging Diarrheal Pathogens

characteristic: project name

text: not determined

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli DEC10A


text: live

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

text: not determined

characteristic: age

text: Celera Assembler 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

text: not determined

text: Australia: Brisbane

text: not determined

text: not determined

text: not determined

text: Escherichia coli DEC10B

text: not determined

text: Emerging Diarrheal Pathogens

text: not determined

characteristic: reference for biomaterial

characteristic: sequencing method

characteristic: serotype

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli DEC10B


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS.ba

text: infant

text: Celera Assembler 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: not determined

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Delaware

text: not determined

text: not determined

text: not determined

text: Escherichia coli DEC10C

characteristic: organism

text: not determined

text: Emerging Diarrheal Pathogens

text: not determined

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli DEC10C

characteristic: title


text: live

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

text: not determined

characteristic: age

text: Celera Assembler 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

text: not determined

text: France

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: not determined

characteristic: number of replicons

text: Escherichia coli DEC10D

text: not determined

characteristic: phenotype

text: Emerging Diarrheal Pathogens

characteristic: project name

text: not determined

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli DEC10D


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS.ba

text: not determined

text: Celera Assembler 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

text: livestock-associated habitat [ENVO:02000005]

text: not determined

text: USA: South Dakota

text: not determined

text: not determined

text: not determined

text: Escherichia coli DEC10E

text: not determined

text: Emerging Diarrheal Pathogens

text: not determined

characteristic: reference for biomaterial

characteristic: sequencing method

characteristic: serotype

text: cow

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli DEC10E


text: live

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

text: not determined

characteristic: age

text: Celera Assembler 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (feature)

text: not determined

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: South Carolina

text: not determined

text: not determined

text: not determined

text: Escherichia coli DEC10F

characteristic: organism

text: not determined

text: Emerging Diarrheal Pathogens

text: not determined

text: rabbit

text: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli DEC10F

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS.ba

text: not determined

text: Celera Assembler 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

text: not determined

text: USA: Montana

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: not determined

characteristic: number of replicons

text: Escherichia coli DEC11A

text: not determined

characteristic: phenotype

text: Emerging Diarrheal Pathogens

characteristic: project name

text: not determined

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli DEC11A


text: live

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

text: infant

characteristic: age

text: Celera Assembler 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

text: not determined

text: USA: Missouri

text: not determined

text: not determined

text: not determined

text: Escherichia coli DEC11B

text: not determined

text: Emerging Diarrheal Pathogens

text: not determined

characteristic: reference for biomaterial

characteristic: sequencing method

characteristic: serotype

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli DEC11B


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS.ba

text: not determined

text: Celera Assembler 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: not determined

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Michigan

text: not determined

text: not determined

text: not determined

text: Escherichia coli DEC11C

characteristic: organism

text: not determined

text: Emerging Diarrheal Pathogens

text: not determined

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli DEC11C

characteristic: title


text: University of Maryland School of Medicine, Institute for Genome Sciences

text: live

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

text: infant

characteristic: age

text: Celera Assembler 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

text: not determined

text: United Kingdom

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: not determined

characteristic: number of replicons

text: Escherichia coli DEC11D

text: not determined

characteristic: phenotype

text: Emerging Diarrheal Pathogens

characteristic: project name

text: not determined

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli DEC11D


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS.ba

text: infant

text: Celera Assembler 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

text: not determined

text: Brazil

text: not determined

text: not determined

text: not determined

text: Escherichia coli DEC11E

text: not determined

text: Emerging Diarrheal Pathogens

text: not determined

characteristic: reference for biomaterial

characteristic: sequencing method

characteristic: serotype

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli DEC11E


text: live

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

text: infant

characteristic: age

text: Celera Assembler 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (feature)

text: not determined

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: United Kingdom

text: not determined

text: not determined

text: not determined

text: Escherichia coli DEC12A

characteristic: organism

text: not determined

text: Emerging Diarrheal Pathogens

text: not determined

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli DEC12A

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS.ba

text: not determined

text: Celera Assembler 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

text: not determined

text: USA: Florida

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: not determined

characteristic: number of replicons

text: Escherichia coli DEC12B

text: not determined

characteristic: phenotype

text: Emerging Diarrheal Pathogens

characteristic: project name

text: not determined

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli DEC12B


text: live

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

text: not determined

characteristic: age

text: Celera Assembler 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

text: not determined

text: Panama

text: not determined

text: not determined

text: not determined

text: Escherichia coli DEC12C

text: not determined

text: Emerging Diarrheal Pathogens

text: not determined

characteristic: reference for biomaterial

characteristic: sequencing method

characteristic: serotype

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli DEC12C


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS.ba

text: not determined

text: Celera Assembler 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

text: human-associated habitat [ENVO:00009003]

characteristic: environment (feature)

text: not determined

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Peru

text: not determined

text: not determined

text: not determined

text: Escherichia coli DEC12D

characteristic: organism

text: not determined

text: Emerging Diarrheal Pathogens

text: not determined

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli DEC12D

characteristic: title


text: live

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

text: not determined

characteristic: age

text: Celera Assembler 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

text: not determined

text: Kenya

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: not determined

characteristic: number of replicons

text: Escherichia coli DEC12E

text: not determined

characteristic: phenotype

text: Emerging Diarrheal Pathogens

characteristic: project name

text: not determined

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli DEC12E


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS.ba

text: not determined

text: Celera Assembler 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

text: not determined

text: USA: Texas

text: not determined

text: not determined

text: not determined

text: Escherichia coli DEC13A

text: not determined

text: Emerging Diarrheal Pathogens

text: not determined

characteristic: reference for biomaterial

characteristic: sequencing method

characteristic: serotype

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli DEC13A


text: live

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

text: not determined

characteristic: age

text: Celera Assembler 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (feature)

text: not determined

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Delaware

text: not determined

text: not determined

text: not determined

text: Escherichia coli DEC13B

characteristic: organism

text: not determined

text: Emerging Diarrheal Pathogens

text: not determined

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli DEC13B

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS.ba

text: infant

text: Celera Assembler 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

text: not determined

text: Tanzania

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: not determined

characteristic: number of replicons

text: Escherichia coli DEC13C

text: not determined

characteristic: phenotype

text: Emerging Diarrheal Pathogens

characteristic: project name

text: not determined

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli DEC13C


text: live

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

text: infant

characteristic: age

text: Celera Assembler 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

text: not determined

text: Rwanda

text: not determined

text: not determined

text: not determined

text: Escherichia coli DEC13D

text: not determined

text: Emerging Diarrheal Pathogens

text: not determined

characteristic: reference for biomaterial

characteristic: sequencing method

characteristic: serotype

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli DEC13D


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS.ba

text: not determined

text: Celera Assembler 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: not determined

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: South Carolina

text: not determined

text: not determined

text: not determined

text: Escherichia coli DEC13E

characteristic: organism

text: not determined

text: Emerging Diarrheal Pathogens

text: not determined

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli DEC13E

characteristic: title


text: live

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

text: infant

characteristic: age

text: Celera Assembler 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

text: not determined

text: Peru

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: not determined

characteristic: number of replicons

text: Escherichia coli DEC14A

text: not determined

characteristic: phenotype

text: Emerging Diarrheal Pathogens

characteristic: project name

text: not determined

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli DEC14A


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS.ba

text: infant

text: Celera Assembler 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

text: not determined

text: India

text: not determined

text: not determined

text: not determined

text: Escherichia coli DEC14B

text: not determined

text: Emerging Diarrheal Pathogens

text: not determined

characteristic: reference for biomaterial

characteristic: sequencing method

characteristic: serotype

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli DEC14B


text: live

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

text: not determined

characteristic: age

text: Celera Assembler 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (feature)

text: not determined

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Peru

text: not determined

text: not determined

text: not determined

text: Escherichia coli DEC14C

characteristic: organism

text: not determined

text: Emerging Diarrheal Pathogens

text: not determined

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli DEC14C

characteristic: title


characteristic: External Id

text: University of Maryland School of Medicine, Institute for Genome Sciences

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS.ba

text: not determined

text: Celera Assembler 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

text: not determined

text: USA: Virginia

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: not determined

characteristic: number of replicons

text: Escherichia coli DEC14D

text: not determined

characteristic: phenotype

text: Emerging Diarrheal Pathogens

characteristic: project name

text: not determined

text: Homo sapiens

text: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli DEC14D


text: live

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

text: not determined

characteristic: age

text: Celera Assembler 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

text: not determined

text: USA: New Jersey

text: not determined

text: not determined

text: not determined

text: Escherichia coli DEC15A

text: not determined

text: Emerging Diarrheal Pathogens

text: not determined

characteristic: reference for biomaterial

characteristic: sequencing method

characteristic: serotype

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli DEC15A