text: Broad Institute

text: live

text: Generic

text: CA

text: Streptococcus pyogenes MGAS9948

text: Generic sample from Streptococcus pyogenes MGAS9948


status: PUBLIC

characteristic: External Id

text: Broad Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: CA

tag: attribute

text: Hymenoptera sp. BOLD:AAH0848

characteristic: organism

characteristic: sample name

characteristic: strain

text: Generic sample from Hymenoptera sp. BOLD:AAH0848

characteristic: title


text: Broad Institute

text: live

text: Generic

text: CA

text: Streptococcus pyogenes MGAS9954

text: Generic sample from Streptococcus pyogenes MGAS9954


text: Broad Institute

text: live

text: Generic

text: CA

text: Streptococcus pyogenes MGAS16472

text: Generic sample from Streptococcus pyogenes MGAS16472


text: Broad Institute

text: live

text: Generic

text: CA

text: Streptococcus pyogenes MGAS16474

text: Generic sample from Streptococcus pyogenes MGAS16474


text: Broad Institute

text: live

text: Generic

text: CA

text: Streptococcus pyogenes MGAS16476

text: Generic sample from Streptococcus pyogenes MGAS16476


text: Broad Institute

text: live

text: Generic

text: CA

text: Streptococcus pyogenes MGAS16478

text: Generic sample from Streptococcus pyogenes MGAS16478


text: Broad Institute

text: live

text: Generic

text: CA

text: Streptococcus pyogenes MGAS15199

text: Generic sample from Streptococcus pyogenes MGAS15199


text: Broad Institute

text: live

text: Generic

text: CA

text: Streptococcus pyogenes MGAS15202

text: Generic sample from Streptococcus pyogenes MGAS15202


text: Broad Institute

text: live

text: Generic

text: CA

text: Streptococcus pyogenes MGAS15194

text: Generic sample from Streptococcus pyogenes MGAS15194


text: Broad Institute

text: live

text: Generic

text: CA

text: Streptococcus pyogenes MGAS15197

text: Generic sample from Streptococcus pyogenes MGAS15197


text: Broad Institute

text: live

text: Generic

text: CA

text: Streptococcus pyogenes MGAS15052

text: Generic sample from Streptococcus pyogenes MGAS15052


text: Broad Institute

text: live

text: Generic

text: CA

text: Streptococcus pyogenes MGAS15055

text: Generic sample from Streptococcus pyogenes MGAS15055


text: Broad Institute

text: live

text: Generic

text: CA

text: Streptococcus pyogenes MGAS15059

text: Generic sample from Streptococcus pyogenes MGAS15059


text: Broad Institute

text: live

text: Generic

text: CA

text: Streptococcus pyogenes MGAS15062

text: Generic sample from Streptococcus pyogenes MGAS15062


text: Broad Institute

text: live

text: Generic

text: CA

text: Streptococcus pyogenes MGAS15037

text: Generic sample from Streptococcus pyogenes MGAS15037


text: Broad Institute

text: live

text: Generic

text: CA

text: Streptococcus pyogenes MGAS15026

text: Generic sample from Streptococcus pyogenes MGAS15026


text: Broad Institute

text: live

text: Generic

text: CA

text: Streptococcus pyogenes MGAS15031

text: Generic sample from Streptococcus pyogenes MGAS15031


text: Broad Institute

text: live

text: Generic

text: CA

text: Streptococcus pyogenes MGAS15033

text: Generic sample from Streptococcus pyogenes MGAS15033


text: Broad Institute

text: live

text: Generic

text: CA

text: Streptococcus pyogenes MGAS15007

text: Generic sample from Streptococcus pyogenes MGAS15007


text: Institute for Molecular Medicine Finland, University of Helsinki

text: live

text: Generic

characteristic: cell line

text: Homo sapiens

text: human breast cancer cell line MCF-7


text: live

text: Generic

text: Homo sapiens

text: human breast cancer cell line BT-474


text: live

text: Generic

text: Homo sapiens

text: human breast cancer cell line SK-BR-3


text: live

text: Generic

text: Homo sapiens

text: human breast cancer cell line KPL-4


normal breast

text: live

text: Generic

text: Homo sapiens

text: normal human breast RNA


Nitella hyalina

text: University of Maryland

text: live

text: Generic

text: Culture harvested from various time points during the day and across the life cycle.

characteristic: description

text: Nitella hyalina

text: Nitella hyalina 454 transcriptome data


Chaetosphaeridium globosum

text: University of Maryland

text: live

text: Generic

text: Culture harvested from various time points during the day and across the life cycle. No sexual stage was seen for this strain.

text: Chaetosphaeridium globosum

text: Chaetosphaeridium globosum 454 transcriptome data


Penium margaritaceum

text: University of Maryland

text: live

text: Generic

text: Penium margaritaceum

text: Penium margaritaceum 454 transcriptome data


Klebsormidium flaccidum

text: University of Maryland

text: live

text: Generic

text: Klebsormidium flaccidum

text: Klebsormidium flaccidum 454 transcriptome data


Chlorokybus atmophyticus

text: University of Maryland

text: live

text: Generic

text: Chlorokybus atmophyticus

text: Chlorokybus atmophyticus 454 transcriptome data


text: DOEM 2007

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Gram+

characteristic: Gram Staining

text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Yes

characteristic: Type Strain

text: free living

characteristic: biotic relationship

text: Canada

characteristic: country

text: Keywords: GSC:MIGS:2.1

characteristic: investigation type

text: Sewage sludge; Canada

characteristic: isolation site

text: sewage sludge

characteristic: isolation-source

text: Acetivibrio cellulolyticus CD2

text: Acetivibrio cellulolyticus CD2, DSM 1870

characteristic: project name

text: DSM 1870, ATCC 33288, NRC 2248

text: anaerobe

text: Mesophile

characteristic: temperature range

text: Generic sample from Acetivibrio cellulolyticus CD2

text: type strain of Acetivibrio cellulolyticus

characteristic: type material


characteristic: External Id

text: DOE-GEBA 2009

text: Gram-

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: isolated by P.Steyn Dep. Mikrobiologie en Plantpatologie University of Pretoria South Africa

characteristic: Isolation Comments

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Nonsporulating

characteristic: Sporulation

text: Yes

text: free living

text: Rod-shaped

characteristic: cell shape

characteristic: collection date

text: Iceland

text: Keywords: GSC:MIGS:2.1

text: Marine

characteristic: environment

text: Soil, Iceland

text: soil

text: Nonmotile

characteristic: motility

text: Pseudopedobacter saltans DSM 12145

characteristic: organism

text: Pedobacter saltans Steyn 113, DSM 12145

text: DSM 12145, LMG 10337

text: aerobe

text: DSM 12145

text: Mesophile

text: Pedobacter saltans DSM 12145, complete genome.

text: type strain of Pseudopedobacter saltans


text: DOE-GEBA 2007

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Prodigal 1.4, GenePRIMP

characteristic: Gene Calling Method

text: Gram-

characteristic: Gram Staining

text: live

text: Generic

text: Yes

characteristic: Type Strain

text: free living

characteristic: biotic relationship

text: Coccus-shaped

text: Iceland

characteristic: country

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Fresh water, Sulfur spring

characteristic: investigation type

text: Hot solfataric spring; Iceland

characteristic: isolation site

text: hot solfataric spring

characteristic: isolation-source

text: Motile

text: Desulfurococcus mucosus DSM 2162

text: Desulfurococcus mucosus 07, DSM 2162

characteristic: project name

text: DSM 2162, ATCC 35584, JCM 9187

text: anaerobe

text: DSM 2162

characteristic: strain

characteristic: temperature optimum

text: Hyperthermophile

characteristic: temperature range

text: Desulfurococcus mucosus DSM 2162, complete genome.

characteristic: title

text: organotroph

text: type strain of Desulfurococcus mucosus

characteristic: type material


characteristic: External Id

text: DOE-GEBA 2009

characteristic: Funding Program

text: Prodigal 1.4, GenePRIMP

text: Gram-

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: isolated by H Schlesner

characteristic: Isolation Comments

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Yes

text: free living

text: Sphere-shaped

characteristic: cell shape

characteristic: collection date

text: Brazil

text: Keywords: GSC:MIGS:2.1

text: Fresh water, Marine

characteristic: environment

text: Water from salt pit, Lagoa Vermelha, Brazil

text: water from a salt pit

text: 28.21 S 51.526 W

characteristic: lat lon

text: Motile

characteristic: motility

text: Rubinisphaera brasiliensis DSM 5305

characteristic: organism

text: Planctomyces brasiliensis IFAM 1448, DSM 5305

text: ATCC 49424, DSM 5305, JCM 21570

text: aerobe

text: Halotolerant

characteristic: salinity

text: DSM 5305

text: Mesophile

text: Planctomyces brasiliensis DSM 5305, complete genome.

text: type strain of Rubinisphaera brasiliensis


characteristic: External Id

characteristic: GOLD Stamp ID

text: Gram+

characteristic: Gram Staining

characteristic: Greengenes ID

text: live

text: Generic

text: Sporulating

characteristic: Sporulation

text: Yes

characteristic: Type Strain

text: free living

characteristic: biotic relationship

text: Rod-shaped

text: USA

characteristic: country

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Fresh water, Sediment

characteristic: investigation type

text: Great Salt Lake sediment

characteristic: isolation site

text: Great Salt Lake sediment

characteristic: isolation-source

text: 41.153066 N 112.66754 W

text: Nonmotile

text: Halanaerobium praevalens DSM 2228

text: 6.3 - 7.4

characteristic: ph

text: Halanaerobium praevalens DSM 2228

characteristic: project name

text: DSM 2228, ATCC 33744

text: anaerobe

text: Halophile

text: DSM 2228

characteristic: strain

text: 34 - 42C

characteristic: temperature optimum

text: Mesophile

characteristic: temperature range

text: Halanaerobium praevalens DSM 2228, complete genome.

characteristic: title

text: type strain of Halanaerobium praevalens

characteristic: type material


Sockeye transcriptome

characteristic: External Id

text: University of Washington

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Oncorhynchus nerka

characteristic: organism

text: Sockeye whole transcriptome assembly


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: analyte type

text: MIGen

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: GRU

text: Homo sapiens

text: male

characteristic: sex

text: Case-Control

characteristic: study design

text: Myocardial Infarction

characteristic: study disease

characteristic: study name

text: Yes

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

text: MIGen

characteristic: submitter handle

text: DNA sample from a human male participant in the dbGaP study STAMPEED: Myocardial Infarction Genetics Consortium (MIGen)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: DNA

text: MIGen

text: GRU

text: Homo sapiens

text: male

text: Case-Control

text: Myocardial Infarction

text: STAMPEED: Myocardial Infarction Genetics Consortium (MIGen)

text: Yes

text: MIGen

characteristic: title


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

text: MIGen

text: GRU

text: Homo sapiens

characteristic: organism

text: male

text: Case-Control

text: No

text: MIGen


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: analyte type

text: MIGen

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: GRU

text: Homo sapiens

text: female

characteristic: sex

text: Case-Control

text: Myocardial Infarction

text: Yes

text: MIGen

text: DNA sample from a human female participant in the dbGaP study STAMPEED: Myocardial Infarction Genetics Consortium (MIGen)


text: dbGaP

text: live

text: Generic

text: DNA

text: MIGen

text: GRU

text: Homo sapiens

text: female

text: Case-Control

characteristic: study design

characteristic: study name

text: No

characteristic: subject is affected

text: MIGen


text: University of California, Los Angeles

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: JCL260 is the production for isobutanol in Atsumi et al. Nature, 2008. We applied serial transfer method on JCL260 to evolve an isobutanol tolerance mutant SA481 and sequenced with Illumina Solexa Genome Analyzer II.

characteristic: description

text: Escherichia coli str. K-12 substr. MG1655

characteristic: strain

text: Isobutanol production host JCL260 (wild-type)


characteristic: External Id

text: University of California, Los Angeles

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Isobutanol tolerance mutant SA481


text: Vetmeduni Vienna

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Genomic DNA isolation of a pooled population of 113 Drosophila melanogaster isofemale lines from Povoa de Varzim, northern Portugal.

text: Drosophila melanogaster

text: Drosophila melanogaster pool

characteristic: title


Sockeye Solid Yacko Creek 1001t

text: University of Washington

text: live

text: Generic

text: Yacko Creek Male 1001. Testes only library. Wood-Igushik Drainage, Yacko Creek, Lake Aleknagik.

text: Oncorhynchus nerka

characteristic: organism

text: Yako Creek 1001t


Rough draft of AU9 contigs

text: University of Illinois

text: live

text: Generic

characteristic: cultivar

text: Variety AU9 is an improved but not released variety of Carica papaya we are re-sequencing, using short read sequence technology, with some desirable traits that could be used in a papaya breeding program.

text: Carica papaya

text: Carica papaya var. AU9


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: mixed shoot tissues

text: Prostrata

text: Cephalotaxus harringtonia 'Prostrata' mixed shoot tissues

text: standard

characteristic: library description

text: standard

characteristic: library type

text: Cephalotaxus harringtonia

text: Generic sample from Cephalotaxus harringtonia


text: live

text: Generic

text: mixed shoot tissues

text: Gnetum gnemon mixed shoot tissues

text: standard

text: standard

text: Gnetum gnemon

text: Generic sample from Gnetum gnemon


text: CSIRO Ecosystem Sciences

text: live

text: Generic

text: Australia: NSW, Yanga National Park

characteristic: country

text: The samples in this 2008 study were collected from floodplain soil from the Yanga National Park, NSW, Australia. The study included 4 different sites, site 1 contained 9 plots, while sites 2, 3, and 4 each contained 6 plots, for a total of 27 plots. 5 replicates samples were collected from each plot for a total of 135 samples. The Gasket1 sample contained 67 separately barcoded partial 18S rRNA gene PCR products derived from 67 of the 135 floodplain soil samples.

text: uncultured eukaryote

text: flood plain soil, Gasket1 samples


Gasket2 sample

text: CSIRO Ecosystem Sciences

characteristic: INSDC secondary accession

text: live

text: Generic

text: Australia: NSW, Yanga National Park

text: The samples in this 2008 study were collected from floodplain soil from the Yanga National Park, NSW, Australia. The study included 4 different sites, site 1 contained 9 plots, while sites 2, 3, and 4 each contained 6 plots, for a total of 27 plots. 5 replicates samples were collected from each plot for a total of 135 samples. The Gasket2 sample contained 68 separately barcoded partial 18S rRNA gene PCR products derived from 68 of the 135 floodplain soil samples.

text: uncultured eukaryote

text: flood plain soil, Gasket2 samples


Control

text: CIT

text: live

text: Generic

characteristic: SRA accession

text: K1106 cell line treated with DMSO only

text: Homo sapiens

text: K1106 treated with DMSO


Treatment

text: CIT

text: live

text: Generic

text: K1106 cell line treated with TG101348 compound for 4 hours, 2uM final concentration

characteristic: description

text: Homo sapiens

text: K1106 treated with TG101348


aphid bacteriocyte sample

text: Yale University

text: live

text: Generic

text: Bacteriocyte RNA collected from 4th instar aphids feeding on two true leaf aged Vicia faba.

text: Acyrthosiphon pisum

text: aphid bacteriocyte RNAseq


aphid body sample

text: Yale University

text: live

text: Generic

text: Aphid body cells and tissues (minus bacteriocytes and embryos) were dissected from 4th instar aphids feeding on true two leaf Vicia faba.

text: Acyrthosiphon pisum

text: aphid body RNAseq


text: University of Florida

text: live

text: Generic

text: Bacillus subtilis


text: University of Florida

text: live

text: Generic

text: Indivdual libraries were made from the tissues CNS,stomatogastric ganglion, and olfactory cluster for Panulirus argus.

text: Panulirus argus

text: spiny lobster CNS/Stomatogastric ganglion Transcriptome


Transcriptome for Olfactory cluster

text: University of Florida

text: live

text: Generic

text: Panulirus argus Olfactory cluster

text: Panulirus argus

text: Panulirus argus Olfactory cluster


text: University of Florida

text: live

text: Generic

text: Limulus polyphemus

text: Limulus polyphemus NeuronalTranscriptome


Elysia

text: Duesseldorf University

text: live

text: Generic

text: Adult specimen were collected in France (Mediterranean coast). After 28 days of starvation 15 specimen were held in liquid nitrogen until being ground to a fine powder. Powder was resuspended in 1 ml TRIzol reagent (Invitrogen) and RNA was isolated according to the manufacturers instructions. Normalized cDNA libraries were constructed by GATC Biotech (Konstanz, Germany).

text: Elysia timida

text: Elysia timida cDNA


Placo

text: Duesseldorf University

text: live

text: Generic

text: Adult specimen were collected in Guam. After 47 days of starvation 1 specimen was held in ethanol/dry ice until being ground to a fine powder in liquid nitrogen. Powder was resuspended in 1 ml TRIzol reagent (Invitrogen) and RNA was isolated according to the manufacturers instructions. Normalized cDNA libraries were constructed by GATC Biotech (Konstanz, Germany).

text: Plakobranchus ocellatus

text: Plakobranchus ocellatus cDNA


name: Dolabrifera dolabrifera Neuronal Transcriptome

text: University of Florida

text: live

text: Generic

text: Indivdual libraries were made from the CNS of Dolabrifera dolabrifera. Libraries were also constructed to target the 5' and 3' ends of transcripts. This process reduces the represntation of the datase.

text: Dolabrifera dolabrifera


text: Newcastle University

text: live

text: Generic

text: Neuroblastoma cell line. Described in Clementi, F., Cabrini, D., Gotti, C. & Sher, E. (1986) Pharmacological characterization of cholinergic receptors in a human neuroblastoma cell line. J Neurochem, 47, 291-7.

text: Homo sapiens

text: IMR32 neuroblastoma cell line


text: Newcastle University

text: live

text: Generic

text: Neuroblastoma primary tumour. Described in Lastowska, M., Viprey, V., Santibanez-Koref, M., Wappler, I., Peters, H., Cullinane, C., Roberts, P., Hall, A. G., Tweddle, D. A., Pearson, A. D., Lewis, I., Burchill, S. A. & Jackson, M. S. (2007) Identification of candidate genes involved in neuroblastoma progression by combining genomic and expression microarrays with survival data. Oncogene, 26, 7432-44.

text: Homo sapiens

text: NB6 Neuroblastoma Tumour


text: Newcastle University

text: live

text: Generic

text: Homo sapiens

text: NB3 Neuroblastoma primary tumour


text: Newcastle University

text: live

text: Generic

text: Primary neuroblastoma tumour. Described in: Lastowska, M., Viprey, V., Santibanez-Koref, M., Wappler, I., Peters, H., Cullinane, C., Roberts, P., Hall, A. G., Tweddle, D. A., Pearson, A. D., Lewis, I., Burchill, S. A. & Jackson, M. S. (2007) Identification of candidate genes involved in neuroblastoma progression by combining genomic and expression microarrays with survival data. Oncogene, 26, 7432-44.

text: Homo sapiens

text: NB5 neuroblastoma tumour


text: Newcastle University

text: live

text: Generic

text: Neuroblastoma primary tumour. Described in: Lastowska, M., Viprey, V., Santibanez-Koref, M., Wappler, I., Peters, H., Cullinane, C., Roberts, P., Hall, A. G., Tweddle, D. A., Pearson, A. D., Lewis, I., Burchill, S. A. & Jackson, M. S. (2007) Identification of candidate genes involved in neuroblastoma progression by combining genomic and expression microarrays with survival data. Oncogene, 26, 7432-44.

text: Homo sapiens

text: NB19 neuroblastoma tumour


text: Newcastle University

text: live

text: Generic

text: Anonymised Acute lymphoblastic leukemia sample.

text: Homo sapiens

text: Acute lymphoblastic leukemia. Sample L547


text: Newcastle University

text: live

text: Generic

text: Anonymised Acute lymphoblastic leukemia sample

text: Homo sapiens

text: Acute lymphoblastic leukemia. Sample L466


text: Newcastle University

text: live

text: Generic

text: Homo sapiens

text: Acute lymphoblastic leukemia. Sample L612


text: Newcastle University

text: live

text: Generic

text: Homo sapiens

text: Acute lymphoblastic leukemia. Sample L731


text: Massachusetts Institute of Technology

text: live

text: Generic

text: Water sample taken via rosette from 50m (mid-oxycline, lower photic zone) at MOOMZ station 3

text: marine metagenome

text: MOOMZ1 50m (MOOMZ ID 1129)


text: Massachusetts Institute of Technology

text: live

text: Generic

text: Water sample taken via rosette from 85m (immediately below oxycline) at MOOMZ station 3

text: marine metagenome

text: MOOMZ1 85m (MOOMZ ID 1148)


text: Massachusetts Institute of Technology

text: live

text: Generic

text: Water sample taken via rosette from 110m (upper OMZ) at MOOMZ station 3

text: marine metagenome

text: MOOMZ1 110m (MOOMZ ID 1171)


text: Massachusetts Institute of Technology

text: live

text: Generic

text: Water sample taken via rosette from 200m (center or OMZ) at MOOMZ station 3

text: marine metagenome

text: MOOMZ1 200m (MOOMZ ID 1113)


name: Staphylococcus aureus 1185 SAUREUS10243-BF-A7B-01-730 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Whole genome shortgun sequencing of Mycobacterium tuberculosis Staphylococcus aureus 1185 using 454 technology

text: Staphylococcus aureus 1185

characteristic: strain

text: Generic sample from Staphylococcus aureus 1185


name: Staphylococcus aureus 9549 SAUREUS2145-BF-A8B-01-740 Sample

characteristic: External Id

text: J. Craig Venter Institute

text: live

text: Generic

text: Staphylococcus aureus 9549

text: Generic sample from Staphylococcus aureus 9549


name: Staphylococcus aureus 9376 SAUREUSCA05-BF-A5B-01-757 Sample

text: J. Craig Venter Institute

characteristic: INSDC center name

text: live

text: Generic

text: Whole genome shortgun sequencing of Mycobacterium tuberculosis Staphylococcus aureus 9376 using 454 technology

text: Staphylococcus aureus 9376

text: Generic sample from Staphylococcus aureus 9376


name: Staphylococcus aureus 2674 SAUREUSQ2286-BF-A6B-01-745 Sample

text: J. Craig Venter Institute

characteristic: INSDC first public

text: live

text: Generic

text: Whole genome shortgun sequencing of Mycobacterium tuberculosis Staphylococcus aureus 2674 using 454 technology

text: Staphylococcus aureus 2674

text: Generic sample from Staphylococcus aureus 2674


name: Staphylococcus aureus Ca11 SAUREUSCA11-BF-A4B-01-717 Sample

text: J. Craig Venter Institute

characteristic: INSDC last update

text: live

text: Generic

text: Whole genome shortgun sequencing of Mycobacterium tuberculosis Staphylococcus aureus Ca11 using 454 technology

text: Staphylococcus aureus Ca11

text: Generic sample from Staphylococcus aureus Ca11


name: Staphylococcus aureus 923 SAUREUSQ2355-BF-A9B-01-741 Sample

text: J. Craig Venter Institute

text: live

characteristic: INSDC status

text: Generic

text: Whole genome shortgun sequencing of Mycobacterium tuberculosis Staphylococcus aureus 923 using 454 technology

text: Staphylococcus aureus subsp. aureus 923

text: Generic sample from Staphylococcus aureus subsp. aureus 923


name: Staphylococcus aureus Q2352 SAUREUSQ2352-BF-A3B-02-806 Sample

text: J. Craig Venter Institute

text: live

text: Generic

characteristic: NCBI submission model

text: Whole genome shortgun sequencing of Mycobacterium tuberculosis Staphylococcus aureus Q2352 using 454 technology

text: Staphylococcus aureus Q2352

text: Generic sample from Staphylococcus aureus Q2352


patient D screening

text: University Of Manchester

text: live

text: Generic

characteristic: NCBI submission package

text: Human immunodeficiency virus 1

text: patient D - screening


Patient D - Week 2

text: University Of Manchester

text: live

text: Generic

text: Human immunodeficiency virus 1

text: Patient D - Week 2

characteristic: title


Patient D - Week 12

text: University Of Manchester

text: live

text: Generic

text: Human immunodeficiency virus 1

characteristic: organism

text: Patient D - Week 12


Patient D - Week 16

text: University Of Manchester

text: live

text: Generic

text: Human immunodeficiency virus 1

text: Patient D - Week 16


Patient E - Screening

text: University Of Manchester

text: live

text: Generic

text: Human immunodeficiency virus 1

text: Patient E - Screening


Patient E - Day 1

text: University Of Manchester

text: live

text: Generic

text: Human immunodeficiency virus 1

text: Patient E - Day 1


Patient E - Week 8

text: University Of Manchester

text: live

text: Generic

text: Human immunodeficiency virus 1

text: Patient E - Week 8


Patient E - Week 24

text: University Of Manchester

text: live

text: Generic

text: Human immunodeficiency virus 1

text: Patient E - Week 24


Patient E - Week 30

text: University Of Manchester

text: live

text: Generic

text: Human immunodeficiency virus 1

text: Patient E - Week 30


wt

text: UMass Medical School

text: live

text: Generic

text: Small (18-30 nt) RNAs from hand-dissected ovaries of plus/w1118; plus/cn flies.

text: Drosophila melanogaster

text: total small RNAs from hand-dissected ovaries of plus/w1118; plus/cn flies.


text: UMass Medical School

text: live

text: Generic

text: Small (18-30 nt) RNAs from hand-dissected ovaries of ago3t2/ago3t3 flie.

text: Drosophila melanogaster

text: total small RNAs from hand-dissected ovaries of ago3t2/ago3t3 flies


rhino

text: UMass Medical School

text: live

text: Generic

text: Small (18-30 nt) RNAs from hand-dissected ovaries of rhi2,cn/rhiKG,plus;ry/plus flies.

text: Drosophila melanogaster

text: total small RNAs from hand-dissected ovaries of rhi2,cn/rhiKG,plus;ry/plus flies.


name: Staphylococcus aureus VRS2 SADAUMMIDPOOL1-BF-01-735 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Whole genome shortgun sequencing of Mycobacterium tuberculosis Staphylococcus aureus VRS2 using 454 technology

text: Staphylococcus aureus VRS2

text: Generic sample from Staphylococcus aureus VRS2


name: Staphylococcus aureus VRS3 SADAUMMIDPOOL1-BF-01-735 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Whole genome shortgun sequencing of Mycobacterium tuberculosis Staphylococcus aureus VRS3 using 454 technology

text: Staphylococcus aureus VRS3

text: Generic sample from Staphylococcus aureus VRS3


name: Staphylococcus aureus 9750 SADAUMMMIDPOOL3-BF-01-753 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Whole genome shortgun sequencing of Mycobacterium tuberculosis Staphylococcus aureus 9750 using 454 technology

text: Staphylococcus aureus 9750

text: Generic sample from Staphylococcus aureus 9750


name: Staphylococcus aureus VRS1 SADAUMMIDPOOL1-BF-01-735 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Whole genome shortgun sequencing of Mycobacterium tuberculosis Staphylococcus aureus VRS1 using 454 technology

text: Staphylococcus aureus VRS1

text: Generic sample from Staphylococcus aureus VRS1


name: Staphylococcus aureus 9730 SADAUMMIDPOOL5-BF-02-691 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Whole genome shortgun sequencing of Mycobacterium tuberculosis Staphylococcus aureus 9730 using 454 technology

text: Staphylococcus aureus 9730

text: Generic sample from Staphylococcus aureus 9730


name: Staphylococcus aureus 11578 SADAUMMMIDPOOL3-BF-01-753 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Whole genome shortgun sequencing of Mycobacterium tuberculosis Staphylococcus aureus 11578 using 454 technology

text: Staphylococcus aureus 11578

text: Generic sample from Staphylococcus aureus 11578


name: Staphylococcus aureus 13205 SADAUMMMIDPOOL4-BF-01-766 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Whole genome shortgun sequencing of Mycobacterium tuberculosis Staphylococcus aureus 13205 using 454 technology

text: Staphylococcus aureus 13205

text: Generic sample from Staphylococcus aureus 13205


name: Staphylococcus aureus 9636 SADAUMMMIDPOOL3-BF-01-753 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Whole genome shortgun sequencing of Mycobacterium tuberculosis Staphylococcus aureus 9636 using 454 technology

text: Staphylococcus aureus 9636

text: Generic sample from Staphylococcus aureus 9636


name: Staphylococcus aureus 5343 SADAUMMMIDPOOL4-BF-01-766 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Whole genome shortgun sequencing of Mycobacterium tuberculosis Staphylococcus aureus 5343 using 454 technology

text: Staphylococcus aureus 5343

text: Generic sample from Staphylococcus aureus 5343


name: Staphylococcus aureus COLVA SADAUMMMIDPOOL4-BF-01-766 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Whole genome shortgun sequencing of Mycobacterium tuberculosis Staphylococcus aureus COLVA using 454 technology

text: Staphylococcus aureus COLVA

text: COLVA

text: Generic sample from Staphylococcus aureus COLVA


Tentacle transcriptome

text: University of Florida - Leonid Moroz

text: live

text: Generic

text: Pleurobrachia bachei

text: Tentacle transcriptome


Comb transcriptome

text: University of Florida - Leonid Moroz

text: live

text: Generic

text: Pleurobrachia bachei

text: Comb transcriptome


Embryo transcriptome

text: University of Florida - Leonid Moroz

text: live

text: Generic

text: Pleurobrachia bachei

text: Embryo transcriptome


bacteria in sponges from the Red Sea

text: hkust-kaust

text: live

text: Generic

text: marine metagenome

text: Pyrosequencing reveals highly diverse and species-specific microbial communities in sponges from the Red Sea


Egg

text: Cornell University

text: live

text: Generic

text: 16S rRNA amplicons obtained from bacteria presented on Drosophila egg surface

text: Drosophila

characteristic: host

text: gut metagenome

text: gut metagenome


Early instar larvae

text: Cornell University

text: live

text: Generic

text: 16S rRNA amplicons obtained from bacteria presented in Drosophila 1st and 2nd instar larvae

text: Drosophila

text: gut metagenome

text: gut metagenome


Third instar larvae

text: Cornell University

text: live

text: Generic

text: 16S rRNA amplicons obtained from bacteria presented in Drosophila 3rd instar larvae

text: Drosophila

text: gut metagenome

text: gut metagenome


Pupae

text: Cornell University

text: live

text: Generic

text: 16S rRNA amplicons obtained from bacteria presented in Drosophila Pupae

text: Drosophila

text: gut metagenome

text: gut metagenome


3-7 days adult M

text: Cornell University

text: live

text: Generic

text: 16S rRNA amplicons obtained from bacteria presented in Drosophila 3-7 days adult females

text: Drosophila

text: gut metagenome

text: gut metagenome


3-7 days adult F

text: Cornell University

text: live

text: Generic

text: 16S rRNA amplicons obtained from bacteria presented in Drosophila 3-7 days adult males

text: Drosophila

text: gut metagenome

text: gut metagenome


3-5 wks adult M

text: Cornell University

text: live

text: Generic

text: 16S rRNA amplicons obtained from bacteria presented in Drosophila 3-5 wks adult males

text: Drosophila

text: gut metagenome

text: gut metagenome


3-5 wks adult F

text: Cornell University

text: live

text: Generic

text: 16S rRNA amplicons obtained from bacteria presented in Drosophila 3-5 wks adult females

text: Drosophila

text: gut metagenome

text: gut metagenome


default drosophila gut

text: Cornell University

text: live

text: Generic

text: Consist of Sample name/MIDs(barcoded sequence)/Description; Egg/ACGAGTGCGT/16S rRNA amplicons obtained from bacteria presented on Drosophila egg surface; Early instar larvae/ACGCTCGACA/16S rRNA amplicons obtained from bacteria presented in Drosophila 1st and 2nd instar larvae; Third instar larvae/AGACGCACTC/16S rRNA amplicons obtained from bacteria presented in Drosophila 3rd instar larvae; Pupae/AGCACTGTAG/16S rRNA amplicons obtained from bacteria presented in Drosophila Pupae; 3-7 days adult M/ATCAGACACG/16S rRNA amplicons obtained from bacteria presented in Drosophila 3-7 days adult females; 3-7 days adult F/ATATCGCGAG/16S rRNA amplicons obtained from bacteria presented in Drosophila 3-7 days adult males; 3-5 wks adult M/CGTGTCTCTA/16S rRNA amplicons obtained from bacteria presented in Drosophila 3-5 wks adult males; 3-5 wks adult F/CTCGCGTGTC/16S rRNA amplicons obtained from bacteria presented in Drosophila 3-5 wks adult females;

text: gut metagenome

text: gut metagenome pool sample


vac6 wt

text: University of Michigan

text: live

text: Generic

text: Saccharomyces cerevisiae

text: Yeast vac6, wild-type segregant pool


vac6 mut

text: University of Michigan

text: live

text: Generic

text: Saccharomyces cerevisiae

text: Yeast vac6, mutant segregant pool


vac22 wt

text: University of Michigan

text: live

text: Generic

text: Saccharomyces cerevisiae

text: Yeast vac22, wild-type segregant pool


text: Naval Medical Research Center, Biological Defense Research Directorate

text: live

text: Generic

text: This mutant's parent strain is 34F2 (sterne).

text: Bacillus anthracis str. Sterne

text: Sterne


text: live

text: Generic

text: Bacillus anthracis str. Sterne

text: Sterne


Unpassaged NCTC11168

text: Michigan State University

text: live

text: Generic

text: Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

text: Wild-type, unpassaged Campylobacter jejuni NCTC11168


Passaged C. jejuni NCTC11168

text: Michigan State University

text: live

text: Generic

text: Mouse-adapted, passaged Campylobacter jejuni NCTC11168


name: Escherichia coli 96.154 STEC015-P8KB-01-587 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Escherichia coli 96.154 is a strain isolated from human, its O antigen type (serotype) is O113, its H antigen type is H12. Its genome encodes for stx2, but not for stx1.

text: Escherichia coli 96.154

text: Sequencing of Shiga toxin-producing E. coli 96.154


name: Escherichia coli 5.0959 STEC016-P8KB-01-583 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Escherichia coli 5.0959 is a strain isolated from an unknown host, its O antigen type (serotype) is O121, its H antigen type is H19. Its genome encodes for stx2, but not for stx1.

text: Escherichia coli 5.0959

text: Sequencing of Shiga toxin-producing E. coli 5.0959


text: Richard Young, Biology, Whitehead Instute - MIT

text: live

text: Generic

text: Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM01660

characteristic: biomaterial provider

text: human fibroblast line GM

characteristic: cell line

characteristic: chip antibody

text: Homo sapiens

text: human fibroblast line GM

text: H3K4me3 human fibroblast GM


characteristic: INSDC secondary accession

text: live

text: Generic

text: hES line BG01

text: Homo sapiens

text: hES line BG01

text: H3K4me3 hES BG01


text: live

text: Generic

characteristic: SRA accession

text: hES line BG03

text: Homo sapiens

text: hES line BG03

text: H3K4me3 hES BG03


text: live

text: Generic

text: hES line WIBR1

text: Homo sapiens

text: hES line WIBR1

text: H3K4me3 hES WIBR1


text: live

text: Generic

text: hES line WIBR2

text: Homo sapiens

text: hES line WIBR2

text: H3K4me3 hES WIBR2


text: live

text: Generic

text: hES line WIBR3

text: Homo sapiens

text: hES line WIBR3

text: H3K4me3 hES WIBR3


text: live

text: Generic

text: hES line WIBR7

text: Homo sapiens

text: hES line WIBR7

text: H3K4me3 hES WIBR7


text: live

text: Generic

text: hiPS line A1

text: Homo sapiens

text: hiPS line A1

text: H3K4me3 hiPS A1


text: live

text: Generic

text: hiPS line A6

text: Homo sapiens

text: hiPS line A6

text: H3K4me3 hiPS A6


text: live

text: Generic

text: hiPS line C1

text: Homo sapiens

text: hiPS line C1

text: H3K4me3 hiPS C1


text: live

text: Generic

text: hiPS line 4

text: Homo sapiens

text: hiPS line 4

text: H3K4me3 hiPS 4


text: live

text: Generic

text: hiPS line PDB1lox_17puro_5

text: Homo sapiens

text: hiPS line PDB1lox_17puro_5

text: H3K4me3 hiPS PDB1lox_17puro_5


text: live

text: Generic

text: hiPS line PDB2lox_17

text: Homo sapiens

text: hiPS line PDB2lox_17

text: H3K4me3 hiPS PDB2lox_17


text: live

text: Generic

text: hiPS line PDB1lox_21puro_26

text: Homo sapiens

text: hiPS line PDB1lox_21puro_26

text: H3K4me3 hiPS PDB1lox_21puro_26


text: live

text: Generic

text: hiPS line PDB2lox_21

text: Homo sapiens

text: hiPS line PDB2lox_21

text: H3K4me3 hiPS PDB2lox_21


text: live

text: Generic

text: human fibroblast line GM

text: Homo sapiens

text: human fibroblast line GM

text: H3K27me3 human fibroblast GM


text: live

text: Generic

text: hES line BG01

text: Homo sapiens

text: hES line BG01

text: H3K27me3 hES BG01


text: live

text: Generic

text: hES line BG03

text: Homo sapiens

text: hES line BG03

text: H3K27me3 hES BG03


text: live

text: Generic

text: hES line WIBR1

text: Homo sapiens

text: hES line WIBR1

text: H3K27me3 hES WIBR1


text: live

text: Generic

text: hES line WIBR2

text: Homo sapiens

text: hES line WIBR2

text: H3K27me3 hES WIBR2


text: live

text: Generic

text: hES line WIBR3

text: Homo sapiens

text: hES line WIBR3

text: H3K27me3 hES WIBR3


text: live

text: Generic

text: hES line WIBR7

text: Homo sapiens

text: hES line WIBR7

text: H3K27me3 hES WIBR7


text: live

text: Generic

text: hiPS line A1

text: Homo sapiens

text: hiPS line A1

text: H3K27me3 hiPS A1


text: live

text: Generic

text: hiPS line A6

text: Homo sapiens

text: hiPS line A6

text: H3K27me3 hiPS A6


text: live

text: Generic

text: hiPS line C1

text: Homo sapiens

text: hiPS line C1

text: H3K27me3 hiPS C1


text: live

text: Generic

text: hiPS line 4

text: Homo sapiens

text: hiPS line 4

text: H3K27me3 hiPS 4


text: live

text: Generic

text: hiPS line PDB1lox_17puro_5

text: Homo sapiens

text: hiPS line PDB1lox_17puro_5

text: H3K27me3 hiPS PDB1lox_17puro_5


text: live

text: Generic

text: hiPS line PDB2lox_17

text: Homo sapiens

text: hiPS line PDB2lox_17

text: H3K27me3 hiPS PDB2lox_17


text: live

text: Generic

text: hiPS line PDB1lox_21puro_26

text: Homo sapiens

text: hiPS line PDB1lox_21puro_26

text: H3K27me3 hiPS PDB1lox_21puro_26


text: live

text: Generic

text: hiPS line PDB2lox_21

text: Homo sapiens

text: hiPS line PDB2lox_21

text: H3K27me3 hiPS PDB2lox_21


text: PGFE, UMass Medical School

text: live

text: Generic

text: 24 h old embryos

characteristic: developmental stage

text: Wild Type

characteristic: genotype

text: Danio rerio

text: normal

characteristic: phenotype

text: Uninjected

text: Uninjected stage_2_off_target_seq_barcode_AA

text: uninjected

characteristic: treatment


characteristic: External Id

text: PGFE, UMass Medical School

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: 24 h old embryos

text: Wild Type

text: Danio rerio

text: normal

text: New ZFNs DD/RR 10pg Normals

text: New ZFNs DD/RR 10pg normal stage_2_off_target_seq_barcode_AC

text: New ZFNs DD/RR 10 pg


text: PGFE, UMass Medical School

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: 24 h old embryos

text: Wild Type

text: Danio rerio

text: monster

text: Original ZFNs DD/RR 10pg Monsters (duplicate)

text: Original ZFNs DD/RR 10pg monster stage_2_off_target_seq_barcode_AG

text: Original ZFNs DD/RR 10 pg


text: PGFE, UMass Medical School

text: live

text: Generic

characteristic: NCBI submission package

text: 24 h old embryos

text: Wild Type

text: Danio rerio

characteristic: organism

text: normal

text: Original ZFNs El/KK 100pg Normals

text: Original ZFNs El/KK 100pg normal stage_2_off_target_seq_barcode_AT

characteristic: title

text: Original ZFNs El/KK 100 pg


text: PGFE, UMass Medical School

text: live

text: Generic

text: 24 h old embryos

text: Wild Type

text: Danio rerio

text: monster

text: original ZFNs DD/RR 10pg Monsters

text: Original ZFNs DD/RR 10pg monster stage_2_off_target_seq_barcode_CA

text: original ZFNs DD/RR 10 pg


text: PGFE, UMass Medical School

text: live

text: Generic

text: 24 h old embryos

text: Wild Type

text: Danio rerio

text: monster

text: New ZFNs DD/RR 20pg Monsters

text: New ZFNs DD/RR 20pg monster stage_2_off_target_seq_barcode_CC

text: New ZFNs DD/RR 20 pg


text: PGFE, UMass Medical School

text: live

text: Generic

text: 24 h old embryos

text: Wild Type

text: Danio rerio

text: monster

text: Original ZFNs DD/RR 20pg Monsters (Replicate)

text: Original ZFNs DD/RR 20pg monster stage_2_off_target_seq_barcode_CG

text: Original ZFNs DD/RR 20 pg


text: PGFE, UMass Medical School

text: live

text: Generic

text: 24 h old embryos

text: Wild Type

text: Danio rerio

text: monster

text: Original ZFNs EL/KK 100pg Monsters

text: Original ZFNs EL/KK 100pg monster stage_2_off_target_seq_barcode_CT

text: Original ZFNs EL/KK 100 pg


text: PGFE, UMass Medical School

text: live

text: Generic

text: 24 h old embryos

text: Wild Type

text: Danio rerio

text: normal

text: Original ZFNs DD/RR 10pg Normals

text: Original ZFNs DD/RR 10pg normal stage_2_off_target_seq_barcode_GA

text: Original ZFNs DD/RR 10 pg


text: PGFE, UMass Medical School

text: live

text: Generic

text: 24 h old embryos

text: Wild Type

text: Danio rerio

text: normal

text: New ZFNs DD/RR 20pg Normals

text: New ZFNs DD/RR 20pg normal stage_2_off_target_seq_barcode_GC

text: New ZFNs DD/RR 20 pg


text: PGFE, UMass Medical School

text: live

text: Generic

text: 24 h old embryos

text: Wild Type

text: Danio rerio

text: normal

text: Original ZFNs EL/KK 50pg Normals

text: Original ZFNs EL/KK 50pg normal stage_2_off_target_seq_barcode_GG

text: Original ZFNs EL/KK 50 pg


text: PGFE, UMass Medical School

text: live

text: Generic

text: 24 h old embryos

text: Wild Type

text: Danio rerio

text: monster

text: Original ZFNs DD/RR 20pg Monsters

text: Original ZFNs DD/RR 20pg monster stage_2_off_target_seq_barcode_TA

text: Original ZFNs DD/RR 20 pg


text: PGFE, UMass Medical School

text: live

text: Generic

text: 24 h old embryos

text: Wild Type

text: Danio rerio

text: normal

text: Original ZFNs DD/RR 10pg normals (duplicate)

text: Original ZFNs DD/RR 10pg normal stage_2_off_target_seq_barcode_TC

text: Original ZFNs DD/RR 10 pg


text: PGFE, UMass Medical School

text: live

text: Generic

text: 24 h old embryos

text: Wild Type

text: Danio rerio

text: monster

text: Original ZFNs EL/KK 50pg monsters

text: Original ZFNs EL/KK 50pg monster stage_2_off_target_seq_barcode_TG

text: Original ZFNs EL/KK 50 pg


text: McGill University

text: live

text: Generic

text: DFB malignant melanoma cell line

characteristic: cell type

text: IGF-I Receptor beta Antibody

text: Cell Signaling Technology

characteristic: chip antibody vendor

text: Homo sapiens

text: DFB cells


text: Naval Medical Research Center, Biological Defense Research Directorate

characteristic: INSDC secondary accession

text: live

text: Generic

text: Bacillus anthracis str. Sterne

text: Sterne

characteristic: strain


text: Young Lab, Whitehead Institute for Biomedical Research

text: live

text: Generic

characteristic: SRA accession

characteristic: antibody catalog number

characteristic: antibody lot number

text: Abcam

characteristic: antibody manufacturer

text: 38B9 cells

characteristic: cell line

characteristic: chip antibody

text: Mus musculus

text: pro-B cell

text: normal culture condition


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Abcam

text: C2C12 cells

text: Mus musculus

text: myotubes

text: myotubes differentiated for 48 h

characteristic: treatment


characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Abcam

text: V6.5 embryonic stem cells

characteristic: genetic background

text: Mus musculus

text: Embyonic stem cells

text: normal culture condition


characteristic: INSDC secondary accession

text: live

text: Generic

text: Abcam

text: V6.5 embryonic stem cells

characteristic: cell type

text: Mus musculus

characteristic: organism

text: Embyonic stem cells

characteristic: title

text: TGF-beta inhibitor SB431542 for 24 h


name: Escherichia coli 2.4168 STEC022-P8KB-01-648 Sample

text: J. Craig Venter Institute

text: live

text: Generic

characteristic: SRA accession

text: Escherichia coli 2.4168 is a strain isolated from water, its O antigen type (serotype) is O157, its H antigen type is H12. Its genome does not encode for either stx1 or stx2.

characteristic: description

text: Escherichia coli 2.4168

characteristic: strain

text: Sequencing of non-Shiga toxin-producing E. coli 2.4168


text: beijing genomics institute

text: live

text: Generic

text: Anas platyrhynchos

text: cherry valley duck spleen

text: cherry valley


text: beijing genomics institute

text: live

text: Generic

text: Anas platyrhynchos

text: cherry valley duck liver

text: cherry valley


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Opitutaceae bacterium TAV3

text: Opitutaceae bacterium TAV3

characteristic: sample number

text: Generic sample from Opitutaceae bacterium TAV3


characteristic: External Id

text: live

text: Generic

text: Archaeoglobus veneficus DSM 11195

text: Archaeoglobus veneficus SNP6

text: DSM 11195

text: Generic sample from Archaeoglobus veneficus SNP6


characteristic: INSDC center name

text: live

text: Generic

text: Synechococcus elongatus PCC 7942

text: Synechococcus elongatus PCC 7942 = FACHB-805

text: PCC 7942

text: Generic sample from Synechococcus elongatus PCC 7942


characteristic: INSDC first public

text: live

text: Generic

text: Pyrolobus fumarii DSM 11204

text: Pyrolobus fumarii 1A

text: DSM 11204

text: Generic sample from Pyrolobus fumarii 1A


text: live

text: Generic

text: Desulfurococcus mucosus DSM 2162

text: Desulfurococcus mucosus DSM 2162

text: DSM 2162

text: Generic sample from Desulfurococcus mucosus DSM 2162


text: live

text: Generic

text: Cytophaga fermentans DSM 9555

text: Saccharicrinis fermentans DSM 9555 = JCM 21142

text: DSM 9555

text: Generic sample from Cytophaga fermentans DSM 9555


text: live

text: Generic

text: Acidobacterium sp. SP1PR4

text: Terriglobus saanensis SP1PR4

text: Generic sample from Terriglobus saanensis SP1PR4


text: live

text: Generic

text: Prevotella bivia DSM 20514

text: Prevotella bivia DSM 20514

text: DSM 20514

text: Generic sample from Prevotella bivia DSM 20514


text: live

text: Generic

text: Variovorax paradoxus EPS

text: Variovorax paradoxus EPS

text: EPS

text: Generic sample from Variovorax paradoxus EPS


text: live

text: Generic

text: Methanothermococcus okinawensis IH1

text: Methanothermococcus okinawensis IH1

text: Generic sample from Methanothermococcus okinawensis IH1


text: live

text: Generic

text: Panicum virgatum WS4U

text: Panicum virgatum

text: Generic sample from Panicum virgatum


text: live

text: Generic

text: Halanaerobium praevalens DSM 2228

text: Halanaerobium praevalens DSM 2228

text: DSM 2228

text: Generic sample from Halanaerobium praevalens DSM 2228


text: live

text: Generic

text: Panicum virgatum WS8U

text: Panicum virgatum

text: Generic sample from Panicum virgatum


text: live

text: Generic

text: Panicum virgatum Shelter

text: Panicum virgatum

text: Shelter

text: Generic sample from Panicum virgatum


text: live

text: Generic

text: Panicum virgatum KY1625

text: Panicum virgatum

text: Generic sample from Panicum virgatum


text: live

text: Generic

text: Panicum virgatum Blackwell

text: Panicum virgatum

text: Blackwell

text: Generic sample from Panicum virgatum


text: live

text: Generic

text: Panicum virgatum Sunburst

text: Panicum virgatum

text: Sunburst

text: Generic sample from Panicum virgatum


text: live

text: Generic

text: Panicum virgatum Cave-in-Rock

text: Panicum virgatum

text: Cave-in-Rock

text: Generic sample from Panicum virgatum


text: live

text: Generic

text: Panicum virgatum WS98-SB

text: Panicum virgatum

text: Generic sample from Panicum virgatum


text: live

text: Generic

text: Panicum virgatum Dacotah

text: Panicum virgatum

text: Dacotah

text: Generic sample from Panicum virgatum


text: live

text: Generic

text: Panicum virgatum Forestburg

text: Panicum virgatum

text: Forestburg

text: Generic sample from Panicum virgatum


text: live

text: Generic

text: Panicum virgatum Pathfinder

text: Panicum virgatum

text: Pathfinder

text: Generic sample from Panicum virgatum


text: live

text: Generic

text: Panicum virgatum WS98-1P

text: Panicum virgatum

text: Generic sample from Panicum virgatum


text: live

text: Generic

text: Panicum virgatum Carthage

text: Panicum virgatum

text: Carthage

text: Generic sample from Panicum virgatum


Lactobacillus crispatus EX849587VC01

text: Virginia Commonwealth University - Center for the Study of Biological Complexity

text: live

text: Generic

text: Lactobacillus crispatus EX849587VC01

text: Lactobacillus crispatus EX849587VC01


text: whole tissue (LCM)

characteristic: BODYSITES

text: live

text: Generic

text: Alamo

characteristic: cultivar

text: Panicum virgatum 'Alamo' whole tissue

text: amplified by emPCR. Srivastava,A.,Blancaflor,E.,Tang,Y

characteristic: library description

text: amplified by emPCR

characteristic: library type

text: Panicum virgatum

text: Generic sample from Panicum virgatum


text: vascular bundle (LCM)

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Alamo

text: Panicum virgatum 'Alamo' vascular bundle

text: amplified by emPCR

text: Panicum virgatum

text: Generic sample from Panicum virgatum


text: whole root

text: early vegetative or tillering growth stage (three weeks after trasplanting of in vitro plantlets

characteristic: DEVELOPMENTAL STAGE

text: Joint Genome Institute, U.S. Department of Energy

characteristic: INSDC secondary accession

text: live

text: Generic

text: Summer VS16

text: Panicum virgatum 'Summer VS16' early vegetative stage - root

text: Conviron room set as 12h light, 30oC/12 hr dark, 26oC, 60% humidity

characteristic: in vivo conditions

text: Standard

text: standard

text: Panicum virgatum

characteristic: organism

text: Generic sample from Panicum virgatum


text: whole shoot (leaf blades, lear sheaths, tillers, crowns)

text: live

text: Generic

characteristic: SRA accession

text: Summer VS16

text: Panicum virgatum 'Summer VS16' early vegetative stage - shoot

characteristic: description

text: standard

text: standard

text: Panicum virgatum

text: Generic sample from Panicum virgatum

characteristic: title


text: shoot

text: late internode elongation stage

characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: Summer VS16

text: Panicum virgatum 'Summer VS16' late vegetative stage - shoot

text: standard

text: standard

text: Panicum virgatum

text: Generic sample from Panicum virgatum


text: root

characteristic: BODYSITES

text: late vegetative internode stage

characteristic: INSDC first public

text: live

text: Generic

text: Summer VS16

text: Panicum virgatum 'Summer VS16' late vegetative stage - root

text: standard

text: standard

text: Panicum virgatum

text: Generic sample from Panicum virgatum


text: whole shoot excluding flower

text: reproductive stage

text: live

text: Generic

text: Summer VS16

characteristic: cultivar

text: Panicum virgatum 'Summer VS16' reproductive stage - shoot

text: standard

characteristic: library description

text: standard

text: Panicum virgatum

text: Generic sample from Panicum virgatum


text: whole root

text: reproductive stage

characteristic: INSDC last update

text: live

text: Generic

text: Summer VS16

text: Panicum virgatum 'Summer VS16' reproductive stage - root

text: standard

text: standard

characteristic: library type

text: Panicum virgatum

text: Generic sample from Panicum virgatum


text: flower, developing seed and mature seed

text: reproductive stage

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Summer VS16

text: Panicum virgatum 'Summer VS16' reproductive stage - flower

text: standard

text: standard

text: Panicum virgatum

text: Generic sample from Panicum virgatum


text: Genomics Research, Genome Sciences Centre, British Columbia Cancer Agency

text: live

text: Generic

characteristic: NCBI submission package

text: colorectal cancer cell line MIP101

characteristic: cell line

text: Colorectal cancer cells derived from a liver metastasis

characteristic: cell type

text: Fluorouracil (5-FU)

characteristic: drug

text: 5-FU sensitive

characteristic: drug sensitivity

text: Homo sapiens

text: Colorectal cancer cell line, FU-sensitive


characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: colorectal cancer cell line MIP/5FU

text: Fluorouracil (5-FU)

text: 5-FU resistant

text: Homo sapiens

characteristic: organism

text: Colorectal cancer cell line, FU-resistant


characteristic: External Id

text: University of Adelaide

characteristic: INSDC center name

text: live

text: Generic

text: Illumina sequencing of the serotype 3 pneumococcal strain Menzies17 (ST458). This strain is a middle ear isolate from a remote Australian Aboriginal community.

characteristic: description

text: Streptococcus pneumoniae Menzies17

characteristic: strain

text: Next generation sequencing of a serotype 3 Streptococcus pneumoniae strain from a remote Australian Aboriginal community

characteristic: title


text: University of Adelaide

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Illumina sequencing of the serotype 3 pneumococcal strain WU2 (ST378).

text: Streptococcus pneumoniae WU2

text: Next generation sequencing of Streptococcus pneumoniae WU2


dfg

text: Karolinska Institute

text: live

characteristic: INSDC status

text: Generic

text: Homo sapiens

text: RNA sample 1


P. vivax IQ07 sequencing project

text: University of California, San Diego

text: live

text: Generic

characteristic: NCBI submission model

text: Plasmodium vivax


BAS Euphausia superba

text: British Antarctic Survey

text: live

text: Generic

characteristic: NCBI submission package

text: Euphausia superba

text: Krill 454 pyrosequencing reveals chaperone and stress transcriptome


text: Young Lab, Whitehead Institute for Biomedical Research

text: live

text: Generic

characteristic: antibody catalog number

text: Abcam

characteristic: antibody vendor

text: MC1R(20):tetMyod1(14) embryonic stem cells

characteristic: chip antibody

text: 10 ng/ml

characteristic: concentration

text: Activin

text: 1 hr

characteristic: duration of treatment

text: Mus musculus

text: Embryonic stem cells

text: Smad3 - Day2 - No Myod1


characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: Abcam

characteristic: cell type

text: 10 ng/ml

text: Activin

characteristic: drug

text: 1 hr

text: Mus musculus

text: Embryonic stem cells

text: Smad3 - Day 2 - Plus Myod1


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: Abcam

text: Mus musculus

characteristic: organism

text: Embryonic stem cells

text: Smad3 - Day 5 - No Myod1


characteristic: INSDC first public

text: live

text: Generic

text: Abcam

text: Mus musculus

text: Embryonic stem cells

characteristic: strain

text: Smad3 - Day 5 - Plus Myod1

characteristic: title


characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Sigma

text: MyoD

text: Mus musculus

text: Embryonic stem cells

text: MyoD_H2Flag - Day 5 - Plus Myod1


text: Verzi, Genetics, Rutgers, the State University of New Jersey

text: live

text: Generic

characteristic: NCBI submission package

characteristic: cell line

text: human intestinal cell line

text: H3K4me2 (Millipore 07-030)

text: Homo sapiens

text: proliferating Caco-2 cells

text: H3K4me2 in proliferating cells


text: live

text: Generic

text: human intestinal cell line

text: H3K4me2 (Millipore 07-030)

characteristic: chip antibody

text: Homo sapiens

text: differentiated Caco-2 cells

text: H3K4me2 in differentated cells


text: live

text: Generic

text: human intestinal cell line

text: CDX2 (Bethyl Labs BL3194)

text: Homo sapiens

text: proliferating Caco-2 cells

text: CDX2 ChIP-seq in proliferating cells


text: live

text: Generic

text: human intestinal cell line

text: CDX2 (Bethyl Labs BL3194)

text: Homo sapiens

text: differentiated Caco-2 cells

text: CDX2 ChIP-seq in differentiated cells


text: live

text: Generic

text: human intestinal cell line

text: GATA6 (Santa Cruz 7244 and Santa Cruz 9055)

text: Homo sapiens

text: proliferating Caco-2 cells

text: GATA6 ChIP-seq in proliferating cells


text: live

text: Generic

text: human intestinal cell line

text: Homo sapiens

text: differentiated Caco-2 cells

text: GATA6 ChIP-seq in differentiated cells


text: live

text: Generic

text: human intestinal cell line

text: HNF4A (Santa Cruz 8987 and Santa Cruz 6556)

text: Homo sapiens

text: proliferating Caco-2 cells

text: HNF4A ChIP-seq in proliferating cells


text: live

text: Generic

text: human intestinal cell line

text: Homo sapiens

text: differentiated Caco-2 cells

text: HNF4A ChIP-seq in differentiated cells


text: live

text: Generic

text: human intestinal cell line

text: Homo sapiens

text: differentiated Caco-2 cells

text: Caco2 cell input DNA


text: Molecular Biology, NCMLS Radboud University Nijmegen

text: live

text: Generic

text: ES-cells

text: Diagenode

characteristic: chip antibody vendor

text: Mus musculus

text: Embryonic Stem cells

text: C57BL/6 x 129


characteristic: INSDC secondary accession

text: live

text: Generic

text: ES-cells

text: Diagenode

text: Mus musculus

text: Embryonic Stem cells


text: live

text: Generic

characteristic: SRA accession

text: ES-cells

text: Millipore

text: Mus musculus

text: Embryonic Stem cells

text: C57BL/6 x 129


text: live

text: Generic

text: ES-cells

characteristic: cell type

text: Millipore

text: Mus musculus

text: Embryonic Stem cells


text: live

text: Generic

text: ES-cells

text: Abcam

text: Mus musculus

text: Embryonic Stem cells

text: C57BL/6 x 129


text: Stunnenberg, Molecular Biology, NCMLS Radboud University Nijmegen

text: live

text: Generic

text: ES-cells

text: Mus musculus

text: Embryonic Stem cells

text: C57BL/6 x 129


text: live

text: Generic

text: ES-cells

text: Mus musculus

text: Embryonic Stem cells

text: C57BL/6 x 129


text: live

text: Generic

text: ES-cells

text: Mus musculus

text: Embryonic Stem cells


text: live

text: Generic

text: ES-cells

text: Mus musculus

text: Embryonic Stem cells

text: NOD


text: live

text: Generic

text: ES-cells

text: Active Motif

text: Mus musculus

text: Embryonic Stem cells

text: C57BL/6 x 129


text: live

text: Generic

text: ES-cells

text: Active Motif

text: Mus musculus

text: Embryonic Stem cells


text: Gregory Lab, Department of Biology, University of Pennsylvania

text: live

text: Generic

characteristic: ecotype

text: wild-type

characteristic: genotype

text: Arabidopsis thaliana

text: ssRNase (Rnase One)

characteristic: rna treatment

text: 1-round rRNA depletion (1X Ribominus)

characteristic: rrna depletion

text: unopened flower buds, wild-type, dsRNA

text: double-stranded RNAs (dsRNAs)

characteristic: target molecules

text: unopened flower buds

characteristic: tissue


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: wild-type

text: Arabidopsis thaliana

characteristic: organism

text: ssRNase (Rnase One)

text: 2-round rRNA depletion (2X Ribominus)

text: unopened flower buds, wild-type, dsRNA

text: double-stranded RNAs (dsRNAs)

text: unopened flower buds

characteristic: title


characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ecotype background

text: rdr6 mutant

text: Arabidopsis thaliana

text: ssRNase (Rnase One)

text: 1-round rRNA depletion (1X Ribominus)

text: unopened flower buds, rdr6, dsRNA

text: double-stranded RNAs (dsRNAs)

text: unopened flower buds


characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: wild-type

text: Arabidopsis thaliana

text: unopened flower buds, wild-type, smRNA

text: small RNAs (smRNAs)

text: unopened flower buds


text: live

text: Generic

text: rdr6 mutant

characteristic: genotype

text: Arabidopsis thaliana

text: unopened flower buds, rdr6, smRNA

text: small RNAs (smRNAs)

text: unopened flower buds


text: Donofrio, Plant and Soil Sciences, University of Delaware

text: live

text: Generic

text: Phytophthora phaseoli

text: Mycelium

text: Race F(PhyP18)

characteristic: strain

text: Plate-grown mycelium

text: Phytophthora phaseoli_plate-grown_rep1


text: live

text: Generic

text: Phytophthora phaseoli

text: Mycelium + Plant

text: Race F(PhyP18)

text: 6 days post inoculation

characteristic: time point

text: Infected lima bean hypocotyl

text: Phytophthora phaseoli_plant-grown 6dpi - rep1


text: John T. Lis, Moleular Biology and Genetics, Cornell University

text: live

text: Generic

text: anti-Rpb3 (subunit of Pol II)

characteristic: antibody

text: Schneider Line 2 (S2)

characteristic: cell line

text: Drosophila melanogaster

text: Pol II (rpb3) ChIP-seq

text: Pol II (rpb3) ChIP-seq 1+2


characteristic: External Id

text: live

text: Generic

text: anti-BrdU (Santa Cruz Biotech (sc-32323-AC))

text: Schneider Line 2 (S2)

text: Drosophila melanogaster

text: untreated GRO-seq

text: untreated GRO-seq 1+2


characteristic: INSDC center name

text: live

text: Generic

text: Schneider Line 2 (S2)

text: Drosophila melanogaster

text: mock_RNAi GRO-seq

text: mock_RNAi GRO-seq 1+2

characteristic: treatment


characteristic: INSDC first public

text: live

text: Generic

text: Schneider Line 2 (S2)

text: Drosophila melanogaster

characteristic: organism

text: NELF_RNAi GRO-seq

text: NELF_RNAi GRO-seq 1+2


characteristic: INSDC last update

text: live

text: Generic

text: Schneider Line 2 (S2)

text: Drosophila melanogaster

text: plus sarkosyl GRO-seq

text: plus sarkosyl GRO-seq 1

characteristic: title

text: plus sarkosyl


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Schneider Line 2 (S2)

text: Drosophila melanogaster

text: minus sarkosyl GRO-seq

text: minus sarkosyl GRO-seq 1+2

text: minus sarkosyl


name: Staphylococcus aureus ca05 SABZ761POOL1-POOL-756 Sample

text: J. Craig Venter Institute

text: live

text: Generic

characteristic: NCBI submission package

text: Whole genome shortgun sequencing of Mycobacterium tuberculosis Staphylococcus aureus ca05 using 454 technology

characteristic: description

text: Staphylococcus aureus ca05

text: Generic sample from Staphylococcus aureus ca05


name: Staphylococcus aureus Q2286 SABZ761POOL1-POOL-756 Sample

text: J. Craig Venter Institute

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: Whole genome shortgun sequencing of Mycobacterium tuberculosis Staphylococcus aureus Q2286 using 454 technology

text: Staphylococcus aureus Q2286

text: Generic sample from Staphylococcus aureus Q2286


name: Staphylococcus aureus 10243 SABZ761POOL2-POOL-741 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Whole genome shortgun sequencing of Mycobacterium tuberculosis Staphylococcus aureus 10243 using 454 technology

text: Staphylococcus aureus 10243

characteristic: strain

text: Generic sample from Staphylococcus aureus 10243


name: Staphylococcus aureus 2145 SABZ761POOL2-POOL-741 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Whole genome shortgun sequencing of Mycobacterium tuberculosis Staphylococcus aureus 2145 using 454 technology

text: Staphylococcus aureus 2145

text: Generic sample from Staphylococcus aureus 2145


name: Staphylococcus aureus Q2355 SABZ761POOL2-POOL-741 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Whole genome shortgun sequencing of Mycobacterium tuberculosis Staphylococcus aureus Q2355 using 454 technology

text: Staphylococcus aureus Q2355

text: Generic sample from Staphylococcus aureus Q2355


name: Staphylococcus aureus 3572 SADAUMMIDPOOL5-BF-02-691 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Whole genome shortgun sequencing of Mycobacterium tuberculosis Staphylococcus aureus 3572 using 454 technology

text: Staphylococcus aureus 3572

text: Generic sample from Staphylococcus aureus 3572


name: Staphylococcus aureus 5319 SADAUMMMIDPOOL3-BF-01-753 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Whole genome shortgun sequencing of Mycobacterium tuberculosis Staphylococcus aureus 5319 using 454 technology

text: Staphylococcus aureus 5319

text: Generic sample from Staphylococcus aureus 5319


name: Staphylococcus aureus 10329 SADAUMMMIDPOOL3-BF-01-753 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Whole genome shortgun sequencing of Mycobacterium tuberculosis Staphylococcus aureus 10329 using 454 technology

text: Staphylococcus aureus 10329

text: Generic sample from Staphylococcus aureus 10329


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: mixed shoot tissues

text: Cedrus atlantica mixed shoots

text: standard

characteristic: library description

text: standard

characteristic: library type

text: Cedrus atlantica

text: Generic sample from Cedrus atlantica


name: Staphylococcus aureus 1135 SADAUMMMIDPOOL4-BF-01-766 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Whole genome shortgun sequencing of Mycobacterium tuberculosis Staphylococcus aureus 1135 using 454 technology

text: Staphylococcus aureus 1135

text: Generic sample from Staphylococcus aureus 1135


name: Staphylococcus aureus 11506 SADAUMMMIDPOOL4-BF-01-766 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Whole genome shortgun sequencing of Mycobacterium tuberculosis Staphylococcus aureus 11506 using 454 technology

text: Staphylococcus aureus 11506

text: Generic sample from Staphylococcus aureus 11506


text: live

text: Generic

text: mixed shoot tissues

text: Pinus palustris mixed shoot tissues

text: standard

text: standard

text: Pinus palustris

text: Generic sample from Pinus palustris


BH12/2008 Hungarian Brucella

text: TGen/NAU

text: live

text: Generic

text: Brucella

text: Phylogenetics of Brucella suis biovar 2 isolates from Hungary


text: live

text: Generic

text: mixed shoot tissues

text: Podocarpus macrophillus mixed shoot tissues

text: standard

text: standard

text: Podocarpus macrophyllus

text: Generic sample from Podocarpus macrophyllus


text: Genomic Medical Institute, Seoul National University

text: live

text: Generic

text: Homo sapiens

text: Altaic Korean 3 (Korean Male) whole genome sequencing


text: live

text: Generic

text: Homo sapiens

text: AK 4 (Korean Male) whole genome sequencing


text: live

text: Generic

text: Homo sapiens

text: Whole genome sequencing of Korean Male (AK5)


text: live

text: Generic

text: Homo sapiens

text: AK6 (Korean Female) whole genome sequencing


text: live

text: Generic

text: Homo sapiens

text: Whole genome sequencing of Korean Male (AK7)


text: live

text: Generic

text: Homo sapiens

text: KM6 (Korean male) whole genome sequencing


text: live

text: Generic

text: Homo sapiens

text: AK14 (Korean Female) whole genome sequencing


text: live

text: Generic

text: Homo sapiens

text: Whole genome sequencing of Korean female (AK20)


text: UCSF-Abbott Viral Discovery Center

text: live

text: Generic

text: Cal-UC12 s_1_AAAAAA Cal-UC2 s_1_CCACCA Mex-619 s_1_AGG Mex-1225 s_1_ATT Mex-943 s_1_CTG Mex-730 s_1_GAG Mex-956 s_1_TCG Cal-UC6 s_1_CGTGCT Ont-069 s_4_CCACCA Ont-MT1 s_4_AAAAAA Ont-084 s_4_GGAGGA Ont-061 s_4_GTCGTC Ont-MT2 s_4_TGCTGC BC-1376 s_8_TATTAT BC-1422 s_8_CGTGCT BC-3059 s_8_AGGAGG BC-8044 s_8_GAGGAG

text: human metagenome

text: Nasal swab samples from patients with 2009 pandemic influenza infection (multiplexed)


text: UCSF-Abbott Viral Discovery Center

text: live

text: Generic

text: human metagenome

text: Illumina lane 4: nasal swab samples from patients with 2009 pandemic influenza infection (multiplexed)


text: UCSF-Abbott Viral Discovery Center

text: live

text: Generic

text: human metagenome

text: Illumina lane 8: nasal swab samples from patients with 2009 pandemic influenza infection (multiplexed)


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: analyte type

text: Coriell

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: NPU

text: Homo sapiens

text: male

characteristic: sex

text: Case-Control

characteristic: study design

characteristic: study name

text: No

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

text: Coriell

characteristic: submitter handle

text: DNA sample from a human male participant in the dbGaP study Study of Irish Amyotrophic Lateral Sclerosis (SIALS)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

text: Coriell

text: NPU

text: Homo sapiens

characteristic: organism

text: male

text: Case-Control

text: Amyotrophic Lateral Sclerosis

characteristic: study disease

text: Study of Irish Amyotrophic Lateral Sclerosis (SIALS)

text: Yes

text: Coriell

characteristic: title


text: dbGaP

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: DNA

characteristic: analyte type

text: Coriell

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: NPU

text: Homo sapiens

text: female

characteristic: sex

text: Case-Control

text: Amyotrophic Lateral Sclerosis

text: Yes

text: Coriell

text: DNA sample from a human female participant in the dbGaP study Study of Irish Amyotrophic Lateral Sclerosis (SIALS)


text: dbGaP

text: live

text: Generic

text: DNA

text: Coriell

text: NPU

text: Homo sapiens

text: male

text: Case-Control

characteristic: study design

characteristic: study name

text: No

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

text: Coriell

characteristic: submitter handle


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: DNA

text: Coriell

text: NPU

text: Homo sapiens

text: female

text: Case-Control

text: No

text: Coriell


text: Joint Genome Institute, U.S. Department of Energy

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: mixed shoot tissues

text: Wintergreen

characteristic: cultivar

text: Sciadopitys verticillata 'Wintergreen'mixed shoot tissues

characteristic: description

text: standard

characteristic: library description

text: standard

characteristic: library type

text: Sciadopitys verticillata

characteristic: organism

text: Generic sample from Sciadopitys verticillata

characteristic: title


Huhu guts

text: Scion

text: live

text: Generic

text: The guts were collected from a few Huhu grubs living in the ground logs of Pinus Radiata in Rotorua. The guts were homogenised before half was extracted for DNA and the other half extracted for RNA before proceeding with amplification and sequencing.

text: insect gut metagenome

text: 16S rRNA pyrosequencing of NZ insect guts


N. tab

text: Queen Mary University of London

text: live

text: Generic

text: Nicotiana tabacum

text: Genome analysis using next generation sequencing reveals preferential elimination of paternally derived repetitive DNA sequences in the allopolyploid Nicotiana tabacum


N. syl

text: Queen Mary University of London

text: live

text: Generic

text: Nicotiana sylvestris


N. tom

text: Queen Mary University of London

text: live

text: Generic

text: Nicotiana tomentosiformis


text: Biodiversity and Climate Research Centre

text: live

text: Generic

text: Snails were sampled from five populations in Switzerland, France, and Sweden. Small parts of the foot of 13 individuals were used to extract DNA using the Qiagen DNeasy kit.

text: Ampullaceana balthica

text: shot gun sequencing the pond snail Radix balthica


text: live

text: Generic

text: Bat 93

characteristic: genotype

text: Phaseolus vulgaris

text: Phaseolus vulgaris Bat 93 GA short reads


text: live

text: Generic

text: Jalo EEP 558

text: Phaseolus vulgaris

text: Phaseolus vulgaris Jalo EEP558 GA short reads


text: live

text: Generic

text: mixed shoot tissues

text: Sequoia sempervirens mixed shoot tissues

text: standard

text: standard

text: Sequoia sempervirens

text: Generic sample from Sequoia sempervirens


text: University of Pennsylvania

text: live

text: Generic

text: Small RNA extracted from 8-12 week-old male mouse liver.

text: Mus musculus


text: University of Pennsylvania

text: live

text: Generic

text: Small RNA extracted from 8-12 week-old mouse liver.

text: Mus musculus


text: University of Pennsylvania

text: live

text: Generic

text: Chromatin from 8-12 week-old mouse liver ChIPed for H3K4me3 using antibody from Millipore, Cat# CS200580.

text: Mus musculus


text: University of Pennsylvania

text: live

text: Generic

text: Small RNA extracted from 8-12 week-old mouse jejunum epithelium.

text: Mus musculus


text: University of Pennsylvania

text: live

text: Generic

text: Chromatin from 8-12 week-old mouse jejunum epithelium ChIPed for H3K4me3 using antibody from Millipore, Cat# CS200580.

text: Mus musculus


text: University of Pennsylvania

text: live

text: Generic

text: Small RNA extracted from 8-12 week-old mouse pancreas.

text: Mus musculus


text: University of Pennsylvania

text: live

text: Generic

text: Chromatin from 8-12 week-old mouse pancreas ChIPed for H3K4me3 using antibody from Millipore, Cat# CS200580.

text: Mus musculus


text: Roche NimbleGen

text: live

text: Generic

text: HapMap NA19240, female, population: Yoruba in Ibadan, Nigeria (abbreviation: YRI)

text: Homo sapiens

text: NA19240 (YRI)


text: Roche NimbleGen

text: live

text: Generic

text: HapMap NA12762, male, population: CEPH (Utah residents with ancestry from northern and western Europe) (abbreviation: CEU)

text: Homo sapiens

text: NA12762 (CEU)


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: mixed shoot tissues

text: Taxus baccata mixed shoot tissues

text: standard

text: standard

text: Taxus baccata

text: Generic sample from Taxus baccata


text: National Center for Genome Resources

text: live

text: Generic

text: Glycine syndetika

text: Glycine syndetika


text: National Center for Genome Resources

text: live

text: Generic

text: Glycine dolichocarpa

text: Glycine dolichocarpa


text: Utrecht University

text: live

text: Generic

text: wild-type

characteristic: deleted gene

text: Schizophyllum commune

text: Cross of H4-8 and H4-8b

characteristic: parental strain

text: Whole colony


characteristic: External Id

text: Utrecht University

characteristic: INSDC center name

text: live

text: Generic

text: Schizophyllum commune

text: Cross of H4-8 and H4-8b

text: Whole colony


text: Utrecht University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: WC2 complemented with hsp3(promoter)-wc2

text: Schizophyllum commune

text: Cross of H4-8 and H4-8b

text: Whole colony


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: mixed shoot tissues

text: Wollemia nobilis mixed shoot tissues

text: standard

text: standard

text: Distylium racemosum

text: Generic sample from Distylium racemosum


text: Naval Medical Research Center, Biological Defense Research Directorate

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

text: Bacillus cereus strain 95-8201

text: Bacillus cereus 95/8201

characteristic: strain

text: Generic sample from Bacillus cereus 95/8201


text: live

text: Generic

characteristic: SRA accession

text: stem,buds,shoot,needles,seeds,cambium

text: Pseudotsuga menziesii mixed tissues

characteristic: description

text: standard

text: standard

text: Pseudotsuga menziesii

text: Generic sample from Pseudotsuga menziesii


text: Keio University School of Medicine

text: live

text: Generic

text: anti-Armi antibody

characteristic: antibody

text: mouse monoclonal antibody raised by our laboratory

characteristic: antibody details

text: Ovarian somatic cell

characteristic: cell type

text: adult

characteristic: developmental stage

text: Drosophila melanogaster

text: Ovarian somatic cell (OSC) line

text: 50-75 nt piR-ILs associated with Armitage from OSCs


text: Jason Lieb, Biology, University of North Carolina at Chapel Hill

text: live

text: Generic

text: adult

text: Caenorhabditis elegans

characteristic: organism

text: young germ line containing (feminized- no embryos) adults

characteristic: title


characteristic: External Id

text: live

text: Generic

text: L3 larval stage

text: Caenorhabditis elegans

text: L3 XO hermaphrodites


characteristic: INSDC center name

text: live

text: Generic

text: Caenorhabditis elegans

text: naked DNA digested with Mnase


text: National Center for Genome Resources

characteristic: INSDC first public

text: live

text: Generic

text: Zea mays

text: Generic sample from Zea mays


text: Washington University, Genome Sequencing Center

characteristic: INSDC last update

text: live

text: Generic

text: Sample Type : cdna

text: Ornithorhynchus anatinus

text: KABF-Illumina_080214_platy_vg_accu_tube1


text: Davuluri Lab, Center for Systems and Computational Biology, Molecular and Cellular Oncogenesis Program, The Wistar Institute

text: live

characteristic: INSDC status

text: Generic

text: postnatal day 0

characteristic: age

text: Abcam Inc.

characteristic: antibody vendor

text: anti-RNAP-II

characteristic: chip antibody

text: Mus musculus

text: cerebellum

characteristic: tissue


characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: postnatal day 5

text: Abcam Inc.

text: anti-RNAP-II

text: Mus musculus

characteristic: strain

text: cerebellum


text: live

text: Generic

text: postnatal day 15

text: Abcam Inc.

text: anti-RNAP-II

text: Mus musculus

text: cerebellum


text: live

text: Generic

text: postnatal day 56

text: Abcam Inc.

text: anti-RNAP-II

text: adult

characteristic: developmental stage

text: Mus musculus

text: cerebellum


text: live

text: Generic

text: postnatal day 0

text: Abcam Inc.

text: Mus musculus

characteristic: organism

text: cerebellum


text: live

text: Generic

text: postnatal day 5

text: Abcam Inc.

text: Mus musculus

text: cerebellum

characteristic: title


characteristic: External Id

text: live

text: Generic

text: postnatal day 15

text: Abcam Inc.

text: Mus musculus

text: cerebellum


characteristic: INSDC center name

text: live

text: Generic

text: postnatal day 56

text: Abcam Inc.

text: adult

text: Mus musculus

text: cerebellum


characteristic: INSDC first public

text: live

text: Generic

text: postnatal day 0

text: Sigma Inc.

text: IgG

text: Mus musculus

text: cerebellum


characteristic: INSDC last update

text: live

text: Generic

text: postnatal day 5

text: Sigma Inc.

text: IgG

text: Mus musculus

text: cerebellum


text: live

characteristic: INSDC status

text: Generic

text: postnatal day 15

text: Sigma Inc.

text: IgG

text: Mus musculus

text: cerebellum


text: live

text: Generic

text: postnatal day 56

characteristic: age

text: Sigma Inc.

text: IgG

text: adult

text: Mus musculus

text: cerebellum


text: live

text: Generic

text: postnatal day 0

text: Mus musculus

text: cerebellum


text: live

text: Generic

text: postnatal day 5

text: Mus musculus

text: cerebellum


text: live

text: Generic

text: postnatal day 15

text: Mus musculus

text: cerebellum


text: live

text: Generic

text: postnatal day 56

text: adult

text: Mus musculus

text: cerebellum


name: Staphylococcus aureus 649 SADAUMMMIDPOOL4-BF-01-766 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Whole genome shortgun sequencing of Staphylococcus aureus 649 using 454 technology

characteristic: description

text: Staphylococcus aureus subsp. aureus 649

text: Whole genome shotgun sequencing of Staphylococcus aureus 649 using 454 technology


text: IMBA

text: live

text: Generic

text: 4d old flies

characteristic: genotype/variation

text: Drosophila melanogaster

text: ovaries

text: Piwi bound piRNAs from tj GAL4 > RNAi-aub ovaries


text: IMBA

text: live

text: Generic

text: 4d old flies

text: Drosophila melanogaster

text: ovaries

text: Piwi bound piRNAs from tj GAL4 > RNAi-piwi ovaries


text: IMBA

text: live

text: Generic

text: 4d old flies

text: Drosophila melanogaster

text: ovaries

text: Piwi bound piRNAs from tj GAL4 > RNAi-armi ovaries


text: IMBA

text: live

text: Generic

text: 4d old flies

text: Drosophila melanogaster

text: ovaries

text: Piwi bound piRNAs from tj GAL4 > RNAi-zuc ovaries


text: IMBA

text: live

text: Generic

text: 4d old flies

text: Drosophila melanogaster

text: ovaries

text: Piwi bound piRNAs from tj GAL4 > RNAi-fs(1)Yb ovaries


text: Baulcombe Group, Plant Sciences, University of Cambridge

text: live

text: Generic

text: Solanum lycopersicum

text: young seedlings aerial tissue

text: young seedlings aerial tissue

characteristic: tissue

text: Solanum lycopersicum replicate 1


characteristic: INSDC secondary accession

text: live

text: Generic

text: Solanum lycopersicum

text: young seedlings aerial tissue

text: young seedlings aerial tissue

text: Solanum lycopersicum replicate 2


text: live

text: Generic

characteristic: NCBI submission model

text: Solanum pennellii

text: young seedlings aerial tissue

text: young seedlings aerial tissue

text: Solanum pennellii replicate 1


text: live

text: Generic

characteristic: NCBI submission package

text: Solanum pennellii

text: young seedlings aerial tissue

text: young seedlings aerial tissue

text: Solanum pennellii replicate 2


text: live

text: Generic

characteristic: SRA accession

text: Solanum lycopersicum x Solanum pennellii

text: young seedlings aerial tissue

text: young seedlings aerial tissue

text: F1 hybrid replicate 1


text: live

text: Generic

text: young seedlings aerial tissue

text: young seedlings aerial tissue

text: F1 hybrid replicate 2


text: live

text: Generic

text: young seedlings aerial tissue

text: young seedlings aerial tissue

text: F2 hybrid replicate 1


text: live

text: Generic

text: young seedlings aerial tissue

text: young seedlings aerial tissue

text: F2 hybrid replicate 2


text: live

text: Generic

text: young seedlings aerial tissue

text: young seedlings aerial tissue

text: F2 hybrid replicate 3


text: live

text: Generic

text: Introgression line IL1-1, lycopersicum background, penellii introgression

characteristic: cell line

text: young seedlings aerial tissue

text: young seedlings aerial tissue

text: Introgression line IL1-1


text: live

text: Generic

text: Introgression line IL2-5 lycopersicum background, penellii introgression

text: young seedlings aerial tissue

text: young seedlings aerial tissue

text: Introgression line IL2-5


text: live

text: Generic

text: Introgression line IL8-1-1 lycopersicum background, penellii introgression

text: young seedlings aerial tissue

text: young seedlings aerial tissue

text: Introgression line IL8-1-1


text: live

text: Generic

text: Introgression line IL8-1D lycopersicum background, penellii introgression

text: young seedlings aerial tissue

text: young seedlings aerial tissue

text: Introgression line IL8-1D


text: live

text: Generic

text: Introgression line IL8-1-3 lycopersicum background, penellii introgression

text: young seedlings aerial tissue

text: young seedlings aerial tissue

text: Introgression line IL8-1-3


text: live

text: Generic

text: Introgression line IL8-2 lycopersicum background, penellii introgression

text: young seedlings aerial tissue

text: young seedlings aerial tissue

text: Introgression line IL8-2


text: live

text: Generic

text: Introgression line IL8-2-1 lycopersicum background, penellii introgression

text: young seedlings aerial tissue

text: young seedlings aerial tissue

text: Introgression line IL8-2-1


text: live

text: Generic

text: Introgression line IL8-3 lycopersicum background, penellii introgression

text: young seedlings aerial tissue

text: young seedlings aerial tissue

text: Introgression line IL8-3


text: live

text: Generic

text: Introgression line IL8-3-1 lycopersicum background, penellii introgression

text: young seedlings aerial tissue

text: young seedlings aerial tissue

text: Introgression line IL8-3-1


text: Computational Systems Biology, Genome Institute of Singapore

text: live

text: Generic

characteristic: antibody batch number

characteristic: antibody catalog number

text: ABcam

characteristic: antibody manufacturer

characteristic: antibody name

text: E14 TG2A mouse embryonic stem cells

characteristic: cell type

text: ChIP DNA

characteristic: fraction

text: Mus musculus

text: E14 TG2A mouse embryonic stem cells

text: pSmad2 ChIPSeq of ES cells treated for 18 hours in 25ng/ml Activin

text: 25ng/ml Activin

characteristic: treatment


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: ABcam

text: E14 TG2A mouse embryonic stem cells

text: ChIP DNA

text: Mus musculus

characteristic: organism

text: E14 TG2A mouse embryonic stem cells

text: pSmad2 ChIPSeq of ES cells treated for 18 hours in 1/5000 DMSO

characteristic: title

text: 1/5000 DMSO


characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: ABcam

text: E14 TG2A mouse embryonic stem cells

text: ChIP DNA

text: Mus musculus

text: E14 TG2A mouse embryonic stem cells

text: pSmad2 ChIPSeq of ES cells treated for 18 hours in 10uM SB

text: 10uM SB


text: live

text: Generic

characteristic: SRA accession

text: E14 TG2A mouse embryonic stem cells

text: Input DNA

text: Mus musculus

text: E14 TG2A mouse embryonic stem cells

text: pSmad2 input DNA Seq of ES cells treated for 18 hours in 25ng/ml Activin

text: 25ng/ml Activin


text: live

text: Generic

text: E14 TG2A mouse embryonic stem cells

text: Input DNA

text: Mus musculus

text: E14 TG2A mouse embryonic stem cells

text: pSmad2 input DNA Seq of ES cells treated for 18 hours in 1/5000 DMSO

text: 1/5000 DMSO


text: live

text: Generic

text: E14 TG2A mouse embryonic stem cells

text: Input DNA

text: Mus musculus

text: E14 TG2A mouse embryonic stem cells

text: pSmad2 input DNA Seq of ES cells treated for 18 hours in 10uM SB

text: 10uM SB


text: Utrecht University

text: live

text: Generic

text: wild-type

characteristic: genotype

text: Schizophyllum commune

text: Cross of H4-8 and H4-8b

characteristic: parental strain

text: Whole colony

text: WT


text: Utrecht University

text: live

text: Generic

text: Hom2 deletion

text: Schizophyllum commune

text: Cross of H4-8 and H4-8b

text: Whole colony


text: Utrecht University

text: live

text: Generic

text: Fst4 deletion

text: Schizophyllum commune

text: Cross of H4-8 and H4-8b

text: Whole colony


text: Institute for Genome Sciences University of MD School of Medicine

text: live

text: Generic

text: Shigella sonnei 3233-85

characteristic: strain

text: Shigella sonnei 3233-85


WT

text: Justus-Liebig University Giessen

text: live

text: Generic

text: Total RNA from 3-dpf wildtype zebrafish embryos was prepared by TRIzol reagent (Invitrogen) and RNeasy kit (QIAGEN). Equal amounts of total RNA were subjected to reverse transcription, using the qScript cDNA synthesis kit (Quanta Biosciences). Control reactions were done in the absence of reverse transcriptase. Total RNA was processed by Illumina standard protocols to prepare the RNA-Seq library.

characteristic: description

text: Danio rerio


MUT

text: Justus-Liebig University Giessen

text: live

text: Generic

text: Total RNA from 3-dpf mutant zebrafish embryos was prepared by TRIzol reagent (Invitrogen) and RNeasy kit (QIAGEN). Equal amounts of total RNA were subjected to reverse transcription, using the qScript cDNA synthesis kit (Quanta Biosciences). Control reactions were done in the absence of reverse transcriptase. Total RNA was processed by Illumina standard protocols to prepare the RNA-Seq library.

text: Danio rerio


Adult Thalamus

text: Newcastle University

text: live

text: Generic

text: cDNA generated by random priming from total human RNA extracted from normal adult thalamus. Obtained from Biochain Institute Inc. (3517 Breakwater Ave. Hayward, CA 94545, USA). Catalogue number: R1234079.

text: Homo sapiens

text: Adult Thalamus


text: UVA

text: live

text: Generic

text: The standard Rd KW20 strain from the Redfield Lab (RR722 or Rd-RR)

text: Haemophilus influenzae Rd KW20

text: Rd KW20

text: Haemophilus influenzae KW20 (RR722)


text: UVA

text: live

text: Generic

text: The clinical isolate 86-028NP was transformed using PCR products of the gyrB and gyrA alleles of MAP7 (an Rd-derivative) to confer novobiocin and nalidixic acid resistance markers in the 86-028NP genetic background.

text: Haemophilus influenzae 86-028NP

text: Haemophilus influenzae 86-028NP NovR NalR


text: Integrative Genomics and Bioinformatics Core, Salk Institute

text: live

text: Generic

text: macrophage

characteristic: cell type

text: H4K5ac (Millipore 07-327, Lot 1682153)

characteristic: chip antibody

characteristic: genetic background

text: Mus musculus

text: thioglycollate-elicited peritoneal macrophages


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: macrophage

text: H4K5ac (Millipore 07-327, Lot 1682153)

text: Mus musculus

text: Kdo2 Lipid A for 1 hour

characteristic: treatment


characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: macrophage

text: H4K8ac (Millipore 07-328 Lot 1655221)

text: Mus musculus


characteristic: INSDC secondary accession

text: live

text: Generic

text: macrophage

text: H4K8ac (Millipore 07-328 Lot 1655221)

text: Mus musculus

characteristic: organism

characteristic: title

text: Kdo2 Lipid A for 1 hour


text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: macrophage

text: H4K12ac (Millipore 07-595 Lot 1676174)

text: Mus musculus


text: live

text: Generic

text: macrophage

text: H4K12ac (Millipore 07-595 Lot 1676174)

text: Mus musculus

text: Kdo2 Lipid A for 1 hour


text: live

text: Generic

text: RAW264.7 Macrophage cell line

text: TBP (Santa Cruz sc-204, LOT H0508)

text: wild-type

text: Mus musculus

text: RAW264.7 cells

text: RAW-Tbp-ChIP-Seq


text: live

text: Generic

text: macrophage

text: Mus musculus

text: ThioMac-totalRNA-RNA-Seq


text: live

text: Generic

text: macrophage

text: Mus musculus

text: Kdo2 Lipid A for 1 hour


text: live

text: Generic

text: macrophage

text: Mus musculus

text: ThioMac-GroSeq-RNA-Seq


text: Medical Systems Biology (Prof. Buchholz), UCC / Medical Faculty and University Hospital Carl Gustav Carus, Technische Universität Dresden

text: live

text: Generic

text: generated by the Antibody and Protein purification facility of MPI-CBG

characteristic: antibody manufacturer

text: R1/E ESC

text: goat-anti-eGFP, raised against His-tagged full-length eGFP and affinity-purified with GST-tagged full-length eGFP

characteristic: differentiation day

text: Mus musculus

text: ESC

text: ESC Rad21-GFP ChIP


text: live

text: Generic

text: R1/E-derived EB

characteristic: cell type

text: Mus musculus

text: EB

text: EB Rad21-GFP ChIP


text: live

text: Generic

characteristic: antibody catalog number

characteristic: antibody lot number

text: Jackson Immunoresearch

text: R1/E ESC

text: Goat IgG isotype control

characteristic: chip antibody

text: Mus musculus

text: ESC

text: ESC Rad21-GFP IgG


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: Jackson Immunoresearch

text: R1/E-derived EB

text: Goat IgG isotype control

text: Mus musculus

text: EB

text: EB Rad21-GFP IgG


text: Broad Institute

characteristic: INSDC first public

text: live

text: Generic

text: Plasmodium falciparum

text: Plasmodium falciparum 649.410

characteristic: sample name

text: Generic sample from Plasmodium falciparum


text: Computational and Mathematical Biology 1, GIS

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: ETOH (ethanol)

characteristic: agent

text: ERα

characteristic: antibody

text: Santa Cruz

text: MCF-7 breast cancer cells

characteristic: cell line

text: ChIP DNA

characteristic: fraction

text: Homo sapiens

text: MCF-7 breast cancer cells

text: ERα sequencing in ETOH (ethanol) treated MCF-7 cells


characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: ERα

text: Santa Cruz

text: MCF-7 breast cancer cells

text: ChIP DNA

text: Homo sapiens

characteristic: organism

text: MCF-7 breast cancer cells

text: ERα sequencing in E2 (estradiol) treated MCF-7 cells

characteristic: title


text: live

text: Generic

text: ETOH (ethanol)

text: ERα

characteristic: antibody catalog number

text: Santa Cruz

characteristic: antibody manufacturer

text: T47D breast cancer cells

text: ChIP DNA

text: Homo sapiens

text: T47D breast cancer cells

text: ERα sequencing in ETOH (ethanol) treated T47D cells


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: ETOH (ethanol)

text: ERα

text: Santa Cruz

text: T47D breast cancer cells

text: ChIP DNA

text: Homo sapiens

text: T47D breast cancer cells

text: ERα sequencing in E2 (estradiol) treated T47D cells


characteristic: INSDC first public

text: live

text: Generic

text: ERα

text: Santa Cruz

text: Ishikawa breast cancer cells

text: ChIP DNA

text: Homo sapiens

text: Ishikawa breast cancer cells

text: ERα sequencing in ETOH (ethanol) treated Ishikawa cells


characteristic: INSDC last update

text: live

text: Generic

text: ERα

text: Santa Cruz

text: Ishikawa breast cancer cells

text: ChIP DNA

text: Homo sapiens

text: Ishikawa breast cancer cells

text: ERα sequencing in E2 (estradiol) treated Ishikawa cells


text: live

characteristic: INSDC status

text: Generic

text: ETOH (ethanol)

text: ERα

text: Santa Cruz

text: ECC1 breast cancer cells

text: ChIP DNA

text: Homo sapiens

text: ECC1 breast cancer cells

text: ERα sequencing in ETOH (ethanol) treated ECC1 cells