Island5 Fragmented litter1

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Medium

characteristic: Island_size class

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: boreal forest

characteristic: biome

text: 0.02-0.07 m

text: amplicon of fungal ITS2 region

text: 430 m

text: 66.0515051 N 17.8900543 E

text: Fragmented Litter1 layer

text: soil metagenome

text: ancient forest

text: 120 cm long 3 cm diameter soil corer

text: Island5 Fragmented litter1 metagenome


Island5 Fragmented litter2

status: PUBLIC

characteristic: External Id

text: Swedish University of Agricultural Sciences

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Medium

tag: attribute

text: Generic

text: boreal forest

characteristic: collection date

text: 0.07-0.10 m

characteristic: depth

text: amplicon of fungal ITS2 region

characteristic: description

text: 430 m

characteristic: elev

characteristic: feature

text: Sweden: island in one of two large lakes near Arjeplog

characteristic: geo loc name

text: 66.0515051 N 17.8900543 E

characteristic: lat lon

text: Fragmented Litter2 layer

characteristic: material

text: soil metagenome

characteristic: organism

text: ancient forest

characteristic: previous land use

text: The island study - boreal forest soil metagenomes

characteristic: project name

text: Material from 8 cores was pooled within island, freeze-dried and ground

characteristic: samp mat process

text: 120 cm long 3 cm diameter soil corer

text: Island5 Fragmented litter2 metagenome

characteristic: title


Island5 Humus1

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Medium

characteristic: Island_size class

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: boreal forest

characteristic: biome

text: 0.10-0.16 m

text: amplicon of fungal ITS2 region

text: 430 m

text: 66.0515051 N 17.8900543 E

text: Humus1 layer

text: soil metagenome

text: ancient forest

text: 120 cm long 3 cm diameter soil corer

text: Island5 Humus1 metagenome


Island5 Humus2

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Medium

text: Generic

text: boreal forest

characteristic: collection date

text: 0.16-0.20 m

characteristic: depth

text: amplicon of fungal ITS2 region

characteristic: description

text: 430 m

characteristic: elev

characteristic: feature

text: 66.0515051 N 17.8900543 E

text: Humus2 layer

text: soil metagenome

text: ancient forest

text: 120 cm long 3 cm diameter soil corer

text: Island5 Humus2 metagenome


Island5 Humus3

text: live

text: Medium

text: Generic

text: boreal forest

text: 0.20-0.40 m

text: amplicon of fungal ITS2 region

text: 430 m

characteristic: geo loc name

text: 66.0515051 N 17.8900543 E

characteristic: lat lon

text: Humus3 layer

characteristic: material

text: soil metagenome

characteristic: organism

text: ancient forest

characteristic: previous land use

characteristic: project name

characteristic: samp mat process

text: 120 cm long 3 cm diameter soil corer

text: Island5 Humus3 metagenome

characteristic: title


Island5 Humus4

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Medium

characteristic: Island_size class

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: boreal forest

characteristic: biome

text: 0.40-0.60 m

text: amplicon of fungal ITS2 region

text: 430 m

text: 66.0515051 N 17.8900543 E

text: Humus4 layer

text: soil metagenome

text: ancient forest

text: 120 cm long 3 cm diameter soil corer

text: Island5 Humus4 metagenome


Island5 Humus5

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Medium

text: Generic

text: boreal forest

characteristic: collection date

text: 0.60-0.80 m

characteristic: depth

text: amplicon of fungal ITS2 region

characteristic: description

text: 430 m

characteristic: elev

characteristic: feature

text: 66.0515051 N 17.8900543 E

text: Humus5 layer

text: soil metagenome

text: ancient forest

text: 120 cm long 3 cm diameter soil corer

text: Island5 Humus5 metagenome


Island5 Litter1

text: live

text: Medium

text: Generic

text: boreal forest

text: 0 m

text: amplicon of fungal ITS2 region

text: 430 m

characteristic: geo loc name

text: 66.0515051 N 17.8900543 E

characteristic: lat lon

text: Litter1 layer

characteristic: material

text: soil metagenome

characteristic: organism

text: ancient forest

characteristic: previous land use

characteristic: project name

characteristic: samp mat process

text: 120 cm long 3 cm diameter soil corer

text: Island5 Litter1 metagenome

characteristic: title


Island5 Litter2

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Medium

characteristic: Island_size class

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: boreal forest

characteristic: biome

text: 0-0.02 m

text: amplicon of fungal ITS2 region

text: 430 m

text: 66.0515051 N 17.8900543 E

text: Litter2 layer

text: soil metagenome

text: ancient forest

text: 120 cm long 3 cm diameter soil corer

text: Island5 Litter2 metagenome


Island6 Fragmented litter1

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Large

text: Generic

text: boreal forest

characteristic: collection date

text: 0.02-0.07 m

characteristic: depth

text: amplicon of fungal ITS2 region

characteristic: description

text: 430 m

characteristic: elev

characteristic: feature

text: 66.0515051 N 17.8900543 E

text: Fragmented Litter1 layer

text: soil metagenome

text: ancient forest

text: 120 cm long 3 cm diameter soil corer

text: Island6 Fragmented litter1 metagenome


Island6 Fragmented litter2

text: live

text: Large

text: Generic

text: boreal forest

text: 0.07-0.10 m

text: amplicon of fungal ITS2 region

text: 430 m

characteristic: geo loc name

text: 66.0515051 N 17.8900543 E

characteristic: lat lon

text: Fragmented Litter2 layer

characteristic: material

text: soil metagenome

characteristic: organism

text: ancient forest

characteristic: previous land use

characteristic: project name

characteristic: samp mat process

text: 120 cm long 3 cm diameter soil corer

text: Island6 Fragmented litter2 metagenome

characteristic: title


Island6 Humus1

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Large

characteristic: Island_size class

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: boreal forest

characteristic: biome

text: 0.10-0.16 m

text: amplicon of fungal ITS2 region

text: 430 m

text: 66.0515051 N 17.8900543 E

text: Humus1 layer

text: soil metagenome

text: ancient forest

text: 120 cm long 3 cm diameter soil corer

text: Island6 Humus1 metagenome


Island6 Humus2

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Large

text: Generic

text: boreal forest

characteristic: collection date

text: 0.16-0.20 m

characteristic: depth

text: amplicon of fungal ITS2 region

characteristic: description

text: 430 m

characteristic: elev

characteristic: feature

text: 66.0515051 N 17.8900543 E

text: Humus2 layer

text: soil metagenome

text: ancient forest

text: 120 cm long 3 cm diameter soil corer

text: Island6 Humus2 metagenome


Island6 Humus3

text: live

text: Large

text: Generic

text: boreal forest

text: 0.20-0.40 m

text: amplicon of fungal ITS2 region

text: 430 m

characteristic: geo loc name

text: 66.0515051 N 17.8900543 E

characteristic: lat lon

text: Humus3 layer

characteristic: material

text: soil metagenome

characteristic: organism

text: ancient forest

characteristic: previous land use

characteristic: project name

characteristic: samp mat process

text: 120 cm long 3 cm diameter soil corer

text: Island6 Humus3 metagenome

characteristic: title


Island6 Litter1

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Large

characteristic: Island_size class

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: boreal forest

characteristic: biome

text: 0 m

text: amplicon of fungal ITS2 region

text: 430 m

text: 66.0515051 N 17.8900543 E

text: Litter1 layer

text: soil metagenome

text: ancient forest

text: 120 cm long 3 cm diameter soil corer

text: Island6 Litter1 metagenome


Island6 Litter2

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Large

text: Generic

text: boreal forest

characteristic: collection date

text: 0-0.02 m

characteristic: depth

text: amplicon of fungal ITS2 region

characteristic: description

text: 430 m

characteristic: elev

characteristic: feature

text: 66.0515051 N 17.8900543 E

text: Litter2 layer

text: soil metagenome

text: ancient forest

text: 120 cm long 3 cm diameter soil corer

text: Island6 Litter2 metagenome


Island7 Fragmented litter1

text: live

text: Small

text: Generic

text: boreal forest

text: 0.02-0.07 m

text: amplicon of fungal ITS2 region

text: 430 m

characteristic: geo loc name

text: 66.0515051 N 17.8900543 E

characteristic: lat lon

text: Fragmented Litter1 layer

characteristic: material

text: soil metagenome

characteristic: organism

text: ancient forest

characteristic: previous land use

characteristic: project name

characteristic: samp mat process

text: 120 cm long 3 cm diameter soil corer

text: Island7 Fragmented litter1 metagenome

characteristic: title


Island7 Fragmented litter2

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Small

characteristic: Island_size class

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: boreal forest

characteristic: biome

text: 0.07-0.10 m

text: amplicon of fungal ITS2 region

text: 430 m

text: 66.0515051 N 17.8900543 E

text: Fragmented Litter2 layer

text: soil metagenome

text: ancient forest

text: 120 cm long 3 cm diameter soil corer

text: Island7 Fragmented litter2 metagenome


Island7 Humus1

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Small

text: Generic

text: boreal forest

characteristic: collection date

text: 0.10-0.16 m

characteristic: depth

text: amplicon of fungal ITS2 region

characteristic: description

text: 430 m

characteristic: elev

characteristic: feature

text: 66.0515051 N 17.8900543 E

text: Humus1 layer

text: soil metagenome

text: ancient forest

text: 120 cm long 3 cm diameter soil corer

text: Island7 Humus1 metagenome


Island7 Humus2

text: live

text: Small

text: Generic

text: boreal forest

text: 0.16-0.20 m

text: amplicon of fungal ITS2 region

text: 430 m

characteristic: geo loc name

text: 66.0515051 N 17.8900543 E

characteristic: lat lon

text: Humus2 layer

characteristic: material

text: soil metagenome

characteristic: organism

text: ancient forest

characteristic: previous land use

characteristic: project name

characteristic: samp mat process

text: 120 cm long 3 cm diameter soil corer

text: Island7 Humus2 metagenome

characteristic: title


Island7 Humus3

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Small

characteristic: Island_size class

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: boreal forest

characteristic: biome

text: 0.20-0.40 m

text: amplicon of fungal ITS2 region

text: 430 m

text: 66.0515051 N 17.8900543 E

text: Humus3 layer

text: soil metagenome

text: ancient forest

text: 120 cm long 3 cm diameter soil corer

text: Island7 Humus3 metagenome


Island7 Humus4

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Small

text: Generic

text: boreal forest

characteristic: collection date

text: 0.40-0.60 m

characteristic: depth

text: amplicon of fungal ITS2 region

characteristic: description

text: 430 m

characteristic: elev

characteristic: feature

text: 66.0515051 N 17.8900543 E

text: Humus4 layer

text: soil metagenome

text: ancient forest

text: 120 cm long 3 cm diameter soil corer

text: Island7 Humus4 metagenome


Island7 Humus5

text: live

text: Small

text: Generic

text: boreal forest

text: 0.60-0.80 m

text: amplicon of fungal ITS2 region

text: 430 m

characteristic: geo loc name

text: 66.0515051 N 17.8900543 E

characteristic: lat lon

text: Humus5 layer

characteristic: material

text: soil metagenome

characteristic: organism

text: ancient forest

characteristic: previous land use

characteristic: project name

characteristic: samp mat process

text: 120 cm long 3 cm diameter soil corer

text: Island7 Humus5 metagenome

characteristic: title


Island7 Humus6

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Small

characteristic: Island_size class

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: boreal forest

characteristic: biome

text: 0.80-1.00 m

text: amplicon of fungal ITS2 region

text: 430 m

text: 66.0515051 N 17.8900543 E

text: Humus6 layer

text: soil metagenome

text: ancient forest

text: 120 cm long 3 cm diameter soil corer

text: Island7 Humus6 metagenome


Island7 Litter1

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Small

text: Generic

text: boreal forest

characteristic: collection date

text: 0 m

characteristic: depth

text: amplicon of fungal ITS2 region

characteristic: description

text: 430 m

characteristic: elev

characteristic: feature

text: 66.0515051 N 17.8900543 E

text: Litter1 layer

text: soil metagenome

text: ancient forest

text: 120 cm long 3 cm diameter soil corer

text: Island7 Litter1 metagenome


Island7 Litter2

text: live

text: Small

text: Generic

text: boreal forest

text: 0-0.02 m

text: amplicon of fungal ITS2 region

text: 430 m

characteristic: geo loc name

text: 66.0515051 N 17.8900543 E

characteristic: lat lon

text: Litter2 layer

characteristic: material

text: soil metagenome

characteristic: organism

text: ancient forest

characteristic: previous land use

characteristic: project name

characteristic: samp mat process

text: 120 cm long 3 cm diameter soil corer

text: Island7 Litter2 metagenome

characteristic: title


Island8 Fragmented litter1

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Medium

characteristic: Island_size class

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: boreal forest

characteristic: biome

text: 0.02-0.07 m

text: amplicon of fungal ITS2 region

text: 430 m

text: 66.0515051 N 17.8900543 E

text: Fragmented Litter1 layer

text: soil metagenome

text: ancient forest

text: 120 cm long 3 cm diameter soil corer

text: Island8 Fragmented litter1 metagenome


Island8 Fragmented litter2

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Medium

text: Generic

text: boreal forest

characteristic: collection date

text: 0.07-0.10 m

characteristic: depth

text: amplicon of fungal ITS2 region

characteristic: description

text: 430 m

characteristic: elev

characteristic: feature

text: 66.0515051 N 17.8900543 E

text: Fragmented Litter2 layer

text: soil metagenome

text: ancient forest

text: 120 cm long 3 cm diameter soil corer

text: Island8 Fragmented litter2 metagenome


Island8 Humus1

text: live

text: Medium

text: Generic

text: boreal forest

text: 0.10-0.16 m

text: amplicon of fungal ITS2 region

text: 430 m

characteristic: geo loc name

text: 66.0515051 N 17.8900543 E

characteristic: lat lon

text: Humus1 layer

characteristic: material

text: soil metagenome

characteristic: organism

text: ancient forest

characteristic: previous land use

characteristic: project name

characteristic: samp mat process

text: 120 cm long 3 cm diameter soil corer

text: Island8 Humus1 metagenome

characteristic: title


Island8 Humus2

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Medium

characteristic: Island_size class

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: boreal forest

characteristic: biome

text: 0.16-0.20 m

text: amplicon of fungal ITS2 region

text: 430 m

text: 66.0515051 N 17.8900543 E

text: Humus2 layer

text: soil metagenome

text: ancient forest

text: 120 cm long 3 cm diameter soil corer

text: Island8 Humus2 metagenome


Island8 Humus3

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Medium

text: Generic

text: boreal forest

characteristic: collection date

text: 0.20-0.40 m

characteristic: depth

text: amplicon of fungal ITS2 region

characteristic: description

text: 430 m

characteristic: elev

characteristic: feature

text: 66.0515051 N 17.8900543 E

text: Humus3 layer

text: soil metagenome

text: ancient forest

text: 120 cm long 3 cm diameter soil corer

text: Island8 Humus3 metagenome


Island8 Humus4

text: live

text: Medium

text: Generic

text: boreal forest

text: 0.40-0.60 m

text: amplicon of fungal ITS2 region

text: 430 m

characteristic: geo loc name

text: 66.0515051 N 17.8900543 E

characteristic: lat lon

text: Humus4 layer

characteristic: material

text: soil metagenome

characteristic: organism

text: ancient forest

characteristic: previous land use

characteristic: project name

characteristic: samp mat process

text: 120 cm long 3 cm diameter soil corer

text: Island8 Humus4 metagenome

characteristic: title


Island8 Litter1

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Medium

characteristic: Island_size class

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: boreal forest

characteristic: biome

text: 0 m

text: amplicon of fungal ITS2 region

text: 430 m

text: 66.0515051 N 17.8900543 E

text: Litter1 layer

text: soil metagenome

text: ancient forest

text: 120 cm long 3 cm diameter soil corer

text: Island8 Litter1 metagenome


Island8 Litter2

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Medium

text: Generic

text: boreal forest

characteristic: collection date

text: 0-0.02 m

characteristic: depth

text: amplicon of fungal ITS2 region

characteristic: description

text: 430 m

characteristic: elev

characteristic: feature

text: 66.0515051 N 17.8900543 E

text: Litter2 layer

text: soil metagenome

text: ancient forest

text: 120 cm long 3 cm diameter soil corer

text: Island8 Litter2 metagenome


Island9 Fragmented litter1

text: live

text: Small

text: Generic

text: boreal forest

text: 0.02-0.07 m

text: amplicon of fungal ITS2 region

text: 430 m

characteristic: geo loc name

text: 66.0515051 N 17.8900543 E

characteristic: lat lon

text: Fragmented Litter1 layer

characteristic: material

text: soil metagenome

characteristic: organism

text: ancient forest

characteristic: previous land use

characteristic: project name

characteristic: samp mat process

text: 120 cm long 3 cm diameter soil corer

text: Island9 Fragmented litter1 metagenome

characteristic: title


Island9 Fragmented litter2

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Small

characteristic: Island_size class

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: boreal forest

characteristic: biome

text: 0.07-0.10 m

text: amplicon of fungal ITS2 region

text: 430 m

text: 66.0515051 N 17.8900543 E

text: Fragmented Litter2 layer

text: soil metagenome

text: ancient forest

text: 120 cm long 3 cm diameter soil corer

text: Island9 Fragmented litter2 metagenome


Island9 Humus1

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Small

text: Generic

text: boreal forest

characteristic: collection date

text: 0.10-0.16 m

characteristic: depth

text: amplicon of fungal ITS2 region

characteristic: description

text: 430 m

characteristic: elev

characteristic: feature

text: 66.0515051 N 17.8900543 E

text: Humus1 layer

text: soil metagenome

text: ancient forest

text: 120 cm long 3 cm diameter soil corer

text: Island9 Humus1 metagenome


Island9 Humus2

text: live

text: Small

text: Generic

text: boreal forest

text: 0.16-0.20 m

text: amplicon of fungal ITS2 region

text: 430 m

characteristic: geo loc name

text: 66.0515051 N 17.8900543 E

characteristic: lat lon

text: Humus2 layer

characteristic: material

text: soil metagenome

characteristic: organism

text: ancient forest

characteristic: previous land use

characteristic: project name

characteristic: samp mat process

text: 120 cm long 3 cm diameter soil corer

text: Island9 Humus2 metagenome

characteristic: title


Island9 Humus3

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Small

characteristic: Island_size class

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: boreal forest

characteristic: biome

text: 0.20-0.40 m

text: amplicon of fungal ITS2 region

text: 430 m

text: 66.0515051 N 17.8900543 E

text: Humus3 layer

text: soil metagenome

text: ancient forest

text: 120 cm long 3 cm diameter soil corer

text: Island9 Humus3 metagenome


Island9 Humus4

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Small

text: Generic

text: boreal forest

characteristic: collection date

text: 0.40-0.60 m

characteristic: depth

text: amplicon of fungal ITS2 region

characteristic: description

text: 430 m

characteristic: elev

characteristic: feature

text: 66.0515051 N 17.8900543 E

text: Humus4 layer

text: soil metagenome

text: ancient forest

text: 120 cm long 3 cm diameter soil corer

text: Island9 Humus4 metagenome


Island9 Humus5

text: live

text: Small

text: Generic

text: boreal forest

text: 0.60-0.80 m

text: amplicon of fungal ITS2 region

text: 430 m

characteristic: geo loc name

text: 66.0515051 N 17.8900543 E

characteristic: lat lon

text: Humus5 layer

characteristic: material

text: soil metagenome

characteristic: organism

text: ancient forest

characteristic: previous land use

characteristic: project name

characteristic: samp mat process

text: 120 cm long 3 cm diameter soil corer

text: Island9 Humus5 metagenome

characteristic: title


Island9 Humus6

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Small

characteristic: Island_size class

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: boreal forest

characteristic: biome

text: 0.80-1.00 m

text: amplicon of fungal ITS2 region

text: 430 m

text: 66.0515051 N 17.8900543 E

text: Humus6 layer

text: soil metagenome

text: ancient forest

text: 120 cm long 3 cm diameter soil corer

text: Island9 Humus6 metagenome


Island9 Litter1

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Small

text: Generic

text: boreal forest

characteristic: collection date

text: 0 m

characteristic: depth

text: amplicon of fungal ITS2 region

characteristic: description

text: 430 m

characteristic: elev

characteristic: feature

text: 66.0515051 N 17.8900543 E

text: Litter1 layer

text: soil metagenome

text: ancient forest

text: 120 cm long 3 cm diameter soil corer

text: Island9 Litter1 metagenome


Island9 Litter2

text: live

text: Small

text: Generic

text: boreal forest

text: 0-0.02 m

text: amplicon of fungal ITS2 region

text: 430 m

characteristic: geo loc name

text: 66.0515051 N 17.8900543 E

characteristic: lat lon

text: Litter2 layer

characteristic: material

text: soil metagenome

characteristic: organism

text: ancient forest

characteristic: previous land use

characteristic: project name

characteristic: samp mat process

text: 120 cm long 3 cm diameter soil corer

text: Island9 Litter2 metagenome

characteristic: title


text: Laboratory of Neuroendocrinology, Rockefeller University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: none, input

characteristic: antibody

text: stress-free

characteristic: condition

text: male

characteristic: gender

text: Rattus norvegicus

text: hippocampus

text: Sprague-Dawley

characteristic: strain

text: hippocampus

characteristic: tissue


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Cell Signaling #9754 - Anti H3K9me3

text: stress-free

text: male

text: Rattus norvegicus

text: hippocampus

text: Sprague-Dawley

text: hippocampus


text: live

text: Generic

text: Cell Signaling #9754 - Anti H3K9me3

text: stressed

text: male

text: Rattus norvegicus

characteristic: organism

text: hippocampus

text: Sprague-Dawley

text: hippocampus


text: ENCODE DCC

text: live

text: Generic

text: rabbit polyclonal. Antibody Target: H3K27ac

characteristic: antibody antibodydescription

text: Histone H3 (acetyl K27). As with H3K9ac, associated with transcriptional initiation and open chromatin structure. It remains unknown whether acetylation has can have different consequences depending on the specific lysine residue targeted. In general, though, there appears to be high redundancy. Histone acetylation is notable for susceptibility to small molecules and drugs that target histone deacetylases.

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: abcam

characteristic: antibody vendorname

text: Coriell

characteristic: biomaterial provider

characteristic: cell

text: fetal lung fibroblast

characteristic: cell description

text: normal

characteristic: cell karyotype

text: endoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: M

characteristic: cell sex

text: std

characteristic: control

text: Standard input signal for most experiments.

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

text: Stamatoyannopoulous - University of Washington

characteristic: lab description

characteristic: labexpid

text: Hotspot-v5.2,lmax-v1.0,WindowDensity-bin20-win+/-75

characteristic: labversion

text: Homo sapiens

characteristic: replicate

text: No special treatment or protocol applies

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: rabbit polyclonal. Antibody Target: H3K27me3

characteristic: antibody antibodydescription

text: Histone H3 (tri-methyl K27). Marks promoters that are silenced by Polycomb proteins in a given lineage; large domains are found at inactive developmental loci.

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Millipore

characteristic: antibody vendorname

text: Coriell

characteristic: biomaterial provider

characteristic: cell

text: fetal lung fibroblast

text: normal

text: endoderm

text: human

text: M

text: std

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Homo sapiens

characteristic: organism

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

text: live

text: Generic

text: rabbit polyclonal, ChIP grade. Antibody Target: H3K9me3

text: Histone H3 (tri methyl K9). Is associated with repressive heterochromatic state (silenced chromatin). NOTE CONTRAST to H3K9me1 which is associated with active and accessible regions.

text: abcam

text: Coriell

text: fetal lung fibroblast

characteristic: cell description

text: normal

characteristic: cell karyotype

text: endoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: M

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

characteristic: labversion

text: Homo sapiens

characteristic: replicate

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: rabbit polyclonal. Antibody Target: H3K4me3

characteristic: antibody antibodydescription

text: Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Millipore

characteristic: antibody vendorname

text: Lonza

characteristic: biomaterial provider

text: HMEC

characteristic: cell

text: mammary epithelial cells

text: normal

text: ectoderm

text: human

text: U

text: std

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Bowtie 0.12.7

text: Homo sapiens

characteristic: organism

text: HMEC

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

text: live

text: Generic

text: Millipore

text: Lonza

text: HRE

text: renal epithelial cells

characteristic: cell description

text: normal

characteristic: cell karyotype

text: mesoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: U

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.5

characteristic: labversion

text: Homo sapiens

characteristic: replicate

text: HRE

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Input

characteristic: antibody

text: Control signal which may be subtracted from experimental raw signal before peaks are called.

characteristic: antibody description

text: Lonza

characteristic: biomaterial provider

text: SKMC

characteristic: cell

text: skeletal muscle cells

text: normal

text: mesoderm

text: human

text: U

text: std

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Bowtie 0.12.7

text: Homo sapiens

characteristic: organism

text: SKMC

characteristic: title


text: ENCODE DCC

text: live

text: Generic

characteristic: antibody antibodydescription

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Millipore

characteristic: antibody vendorname

text: ATCC

text: colorectal adenocarcinoma. (PMID: 1939345)

characteristic: cell description

text: cancer

characteristic: cell karyotype

text: endoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: M

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.5

characteristic: labversion

text: Homo sapiens

characteristic: replicate


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

characteristic: antibody antibodydescription

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Millipore

text: ScienCell

characteristic: biomaterial provider

text: HBMEC

characteristic: cell

text: brain microvascular endothelial cells

text: normal

text: mesoderm

text: human

text: U

text: std

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Bowtie 0.12.7

text: Homo sapiens

characteristic: organism

text: HBMEC

characteristic: title

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

text: live

text: Generic

text: Input

characteristic: antibody description

text: Lonza

text: AoAF

text: aortic adventitial fibroblast cells

characteristic: cell description

text: normal

characteristic: cell karyotype

text: mesoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: F

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.7

characteristic: labversion

text: Homo sapiens

characteristic: replicate

text: AoAF


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

characteristic: antibody antibodydescription

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Millipore

characteristic: antibody vendorname

text: ATCC

characteristic: biomaterial provider

characteristic: cell

text: leukemia, The continuous cell line K-562 was established by Lozzio and Lozzio from the pleural effusion of a 53-year-old female with chronic myelogenous leukemia in terminal blast crises. - ATCC

text: cancer

text: mesoderm

text: human

text: F

text: std

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Bowtie 0.12.5

text: Homo sapiens

characteristic: organism

characteristic: title

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Millipore

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=AG09319

text: gum tissue fibroblasts from apparently heathly 24 year old

characteristic: cell description

text: normal

characteristic: cell karyotype

text: human

characteristic: cell organism

text: F

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.7

characteristic: labversion

text: Homo sapiens

characteristic: replicate


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Input

characteristic: antibody

characteristic: antibody description

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=AG09309

characteristic: biomaterial provider

characteristic: cell

text: adult toe fibroblast from apparently healthy 21 year old, 7% of the cells examined showing random chromosome loss/gain -Coriell

text: human

text: F

text: std

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Bowtie 0.12.7

text: Homo sapiens

characteristic: organism

characteristic: title

characteristic: treatment description


text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: antibody antibodydescription

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Millipore

characteristic: antibody vendorname

characteristic: cell description

text: human

characteristic: cell organism

text: F

characteristic: cell sex

text: std

characteristic: control

text: Standard input signal for most experiments.

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.7

text: Homo sapiens


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Input

characteristic: antibody

characteristic: antibody description

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=AG04450

characteristic: biomaterial provider

characteristic: cell

text: fetal lung fibroblast

text: normal

characteristic: cell karyotype

text: endoderm

characteristic: cell lineage

text: human

text: M

text: std

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Stamatoyannopoulous - University of Washington

text: Bowtie 0.12.7

characteristic: labversion

text: Homo sapiens

characteristic: organism

characteristic: replicate

characteristic: title

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: antibody antibodydescription

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Millipore

characteristic: antibody vendorname

text: Lonza

text: AoAF

text: aortic adventitial fibroblast cells

characteristic: cell description

text: normal

text: mesoderm

text: human

characteristic: cell organism

text: F

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.7

text: Homo sapiens

text: AoAF

text: No special treatment or protocol applies


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Input

characteristic: antibody

characteristic: antibody description

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=AG10803

characteristic: biomaterial provider

characteristic: cell

text: abdominal skin fibroblasts from apparently heathly 22 year old, 8% of the cells examined showing random chromosome loss, 2% showing random chromosome gain, and 2% showing 69,XYY -Coriell

text: human

text: M

text: std

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Bowtie 0.12.7

characteristic: labversion

text: Homo sapiens

characteristic: organism

characteristic: replicate

characteristic: title

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC last update

text: live

text: Generic

characteristic: antibody antibodydescription

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Millipore

characteristic: antibody vendorname

characteristic: cell description

text: human

characteristic: cell organism

text: M

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.7

text: Homo sapiens


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Input

characteristic: antibody

characteristic: antibody description

characteristic: biomaterial provider

characteristic: cell

text: normal

characteristic: cell karyotype

text: human

text: F

text: std

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Bowtie 0.12.7

characteristic: labversion

text: Homo sapiens

characteristic: organism

characteristic: replicate

characteristic: title

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Generic

text: rabbit polyclonal. Antibody Target: H3K36me3

characteristic: antibody antibodydescription

text: Histone H3 (tri-methyl K36). Marks regions of RNAPII elongation, including coding and non-coding transcripts.

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Abcam

characteristic: antibody vendorname

text: Lonza

text: NHEK

text: epidermal keratinocytes

characteristic: cell description

text: normal

text: ectoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: U

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.5

text: Homo sapiens

text: NHEK


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: rabbit polyclonal. Antibody Target: H3K4me3

text: Millipore

text: Lonza

characteristic: biomaterial provider

text: NHEK

characteristic: cell

text: epidermal keratinocytes

text: normal

characteristic: cell karyotype

text: ectoderm

text: human

text: U

text: std

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Bowtie 0.12.5

characteristic: labversion

text: Homo sapiens

characteristic: organism

characteristic: replicate

text: NHEK

characteristic: title

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

text: live

text: Generic

text: Input

characteristic: antibody description

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=AG04449

text: fetal buttock/thigh fibroblast

characteristic: cell description

text: normal

text: human

characteristic: cell organism

text: M

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.7

text: Homo sapiens


text: ENCODE DCC

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

characteristic: antibody antibodydescription

text: Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Millipore

characteristic: antibody vendorname

characteristic: biomaterial provider

characteristic: cell

text: fetal lung fibroblast

text: normal

characteristic: cell karyotype

text: endoderm

characteristic: cell lineage

text: human

text: M

text: std

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Bowtie 0.12.7

characteristic: labversion

text: Homo sapiens

characteristic: organism

characteristic: replicate


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Millipore

text: ATCC

text: BJ

text: skin fibroblast, The line was established from skin taken from normal foreskin. - ATCC. (PMID: 9916803)

characteristic: cell description

text: normal

text: human

characteristic: cell organism

text: M

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.5

text: Homo sapiens

text: BJ

characteristic: title

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

characteristic: antibody antibodydescription

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Millipore

characteristic: antibody vendorname

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM06990

characteristic: biomaterial provider

characteristic: cell

text: B-lymphocyte, lymphoblastoid, International HapMap Project, CEPH/Utah, treatment: Epstein-Barr Virus transformed

text: normal

characteristic: cell karyotype

text: mesoderm

characteristic: cell lineage

text: human

text: F

text: std

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Bowtie 0.12.5

characteristic: labversion

text: Homo sapiens

characteristic: organism

characteristic: replicate


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: rabbit polyclonal. Antibody Target: H3K27me3

text: Histone H3 (tri-methyl K27). Marks promoters that are silenced by Polycomb proteins in a given lineage; large domains are found at inactive developmental loci.

text: Millipore

text: Lonza

text: HUVEC

text: umbilical vein endothelial cells

characteristic: cell description

text: normal

text: mesoderm

text: human

characteristic: cell organism

text: U

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.5

text: Homo sapiens

text: HUVEC

characteristic: title

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

characteristic: antibody antibodydescription

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Millipore

characteristic: antibody vendorname

text: Lonza

characteristic: biomaterial provider

text: HUVEC

characteristic: cell

text: umbilical vein endothelial cells

text: normal

characteristic: cell karyotype

text: mesoderm

characteristic: cell lineage

text: human

text: U

text: std

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Bowtie 0.12.5

characteristic: labversion

text: Homo sapiens

characteristic: organism

characteristic: replicate

text: HUVEC


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Millipore

text: ATCC

text: hepatocellular carcinoma

characteristic: cell description

text: cancer

text: endoderm

text: human

characteristic: cell organism

text: M

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.5

text: Homo sapiens

characteristic: title

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

characteristic: antibody antibodydescription

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Millipore

characteristic: antibody vendorname

text: WiCell

characteristic: biomaterial provider

characteristic: cell

text: undifferentiated embryonic stem cells

text: inner cell mass

characteristic: cell lineage

text: human

text: U

text: std

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Bowtie 0.12.5

characteristic: labversion

text: Homo sapiens

characteristic: organism

characteristic: replicate


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Abcam

text: WiCell

text: undifferentiated embryonic stem cells

characteristic: cell description

text: inner cell mass

text: human

characteristic: cell organism

text: U

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.5

text: Homo sapiens

characteristic: title

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

characteristic: antibody antibodydescription

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Millipore

characteristic: antibody vendorname

text: WiCell

characteristic: biomaterial provider

characteristic: cell

text: undifferentiated embryonic stem cells

text: inner cell mass

characteristic: cell lineage

text: human

text: U

text: std

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Bowtie 0.12.5

characteristic: labversion

text: Homo sapiens

characteristic: organism

characteristic: replicate


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Input

text: Control signal which may be subtracted from experimental raw signal before peaks are called.

characteristic: antibody description

text: WiCell

text: undifferentiated embryonic stem cells

characteristic: cell description

text: inner cell mass

text: human

characteristic: cell organism

text: U

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.5

text: Homo sapiens

characteristic: title

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

characteristic: antibody antibodydescription

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Millipore

characteristic: antibody vendorname

characteristic: biomaterial provider

characteristic: cell

text: fetal buttock/thigh fibroblast

text: normal

characteristic: cell karyotype

text: human

text: M

text: std

text: Standard input signal for most experiments.

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Bowtie 0.12.7

characteristic: labversion

text: Homo sapiens

characteristic: organism

characteristic: replicate


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Millipore

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM12878

text: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus

characteristic: cell description

text: normal

text: mesoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: F

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.5

text: Homo sapiens

characteristic: title

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Input

characteristic: antibody

characteristic: antibody description

text: WiCell

characteristic: biomaterial provider

characteristic: cell

text: undifferentiated embryonic stem cells

text: inner cell mass

text: human

text: U

text: std

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Stamatoyannopoulous - University of Washington

text: Bowtie 0.12.7

characteristic: labversion

text: Homo sapiens

characteristic: organism

characteristic: replicate

characteristic: treatment

text: H7 embryoid bodies differentiation protocol for cardiomyocyte, endothelial, smooth muscle, with markers cardiac troponin T (cTnT), CD31/PECAM1, smooth muscle alpha actin (SMA), respectively, using proteins from bone morphogenic protein 4 (BMP4), activin A and basic fibroblast growth factor (bFGF) for 2 days, lineage: mesoderm


text: ENCODE DCC

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: antibody antibodydescription

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Millipore

characteristic: antibody vendorname

text: WiCell

text: undifferentiated embryonic stem cells

characteristic: cell description

text: inner cell mass

characteristic: cell lineage

text: human

characteristic: cell organism

text: U

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.7

text: Homo sapiens

characteristic: title

text: H7 embryoid bodies differentiation protocol for cardiomyocyte, endothelial, smooth muscle, with markers cardiac troponin T (cTnT), CD31/PECAM1, smooth muscle alpha actin (SMA), respectively, using proteins from bone morphogenic protein 4 (BMP4), activin A and basic fibroblast growth factor (bFGF) for 9 days, lineage: mesoderm


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

characteristic: antibody antibodydescription

text: Millipore

text: WiCell

characteristic: biomaterial provider

text: in vitro differentiated cells

characteristic: biomaterial type

characteristic: cell

text: undifferentiated embryonic stem cells

text: inner cell mass

text: human

text: U

text: cardiac mesoderm

characteristic: cell type

text: std

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: donor id

text: UW

text: Bowtie 0.12.7

characteristic: labversion

text: Homo sapiens

characteristic: organism

characteristic: replicate

characteristic: treatment

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: rabbit polyclonal. Antibody Target: H3K36me3

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Abcam

characteristic: antibody vendorname

text: WiCell

text: undifferentiated embryonic stem cells

characteristic: cell description

text: inner cell mass

characteristic: cell lineage

text: human

characteristic: cell organism

text: U

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.7

text: Homo sapiens

text: UW_ChipSeq_H7-hESC_H3K36me3_diffProtA_9d

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Input

characteristic: antibody

characteristic: antibody description

text: WiCell

characteristic: biomaterial provider

characteristic: cell

text: undifferentiated embryonic stem cells

text: inner cell mass

text: human

text: U

text: std

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Bowtie 0.12.7

characteristic: labversion

text: Homo sapiens

characteristic: organism

characteristic: replicate

characteristic: treatment

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

text: live

text: Generic

text: Input

text: WiCell

text: undifferentiated embryonic stem cells

characteristic: cell description

text: inner cell mass

characteristic: cell lineage

text: human

characteristic: cell organism

text: U

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.7

text: Homo sapiens

characteristic: title

text: H7 embryoid bodies differentiation protocol for cardiomyocyte, endothelial, smooth muscle, with markers cardiac troponin T (cTnT), CD31/PECAM1, smooth muscle alpha actin (SMA), respectively, using proteins from bone morphogenic protein 4 (BMP4), activin A and basic fibroblast growth factor (bFGF) for 5 days, lineage: mesoderm


text: ENCODE DCC

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Input

characteristic: antibody

characteristic: antibody description

text: Rajinder Kaul, UW

characteristic: biomaterial provider

characteristic: cell

text: B cells, African American, draw number 1, newly promoted to tier 2: not in 2011 analysis

text: normal

characteristic: cell karyotype

text: mesoderm

text: human

text: F

text: std

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Bowtie 0.12.7

characteristic: labversion

text: Homo sapiens

characteristic: organism

characteristic: replicate

text: No special treatment or protocol applies


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

text: live

text: Generic

characteristic: antibody antibodydescription

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Millipore

characteristic: antibody vendorname

characteristic: cell description

text: normal

text: mesoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: F

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.5

text: Homo sapiens

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Input

characteristic: antibody

characteristic: antibody description

text: Rajinder Kaul, UW

characteristic: biomaterial provider

text: primary cell

characteristic: biomaterial type

characteristic: cell

text: B cells, caucasian, draw number 1, newly promoted to tier 2: not in 2011 analysis

text: normal

characteristic: cell karyotype

text: mesoderm

text: human

text: F

text: B cell

characteristic: cell type

text: std

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: donor id

text: UW

text: Bowtie 0.12.7

characteristic: labversion

text: Homo sapiens

characteristic: organism

characteristic: replicate

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: rabbit polyclonal. Antibody Target: H3K4me3

characteristic: antibody antibodydescription

text: Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Millipore

characteristic: antibody vendorname

text: Rajinder Kaul, UW

characteristic: cell description

text: normal

text: mesoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: F

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.7

text: Homo sapiens

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

characteristic: antibody antibodydescription

text: Millipore

text: Lonza

characteristic: biomaterial provider

text: SAEC

characteristic: cell

text: small airway epithelial cells

text: normal

characteristic: cell karyotype

text: endoderm

text: human

text: U

text: std

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Bowtie 0.12.5

characteristic: labversion

text: Homo sapiens

characteristic: organism

characteristic: replicate

text: SAEC

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

text: live

text: Generic

text: rabbit polyclonal. Antibody Target: H3K27me3

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Millipore

characteristic: antibody vendorname

text: Lonza

text: SAEC

text: small airway epithelial cells

characteristic: cell description

text: normal

text: endoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: U

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.5

text: Homo sapiens

text: SAEC

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

characteristic: antibody antibodydescription

text: Millipore

text: ATCC

characteristic: biomaterial provider

characteristic: cell

text: cervical carcinoma

text: cancer

characteristic: cell karyotype

text: ectoderm

text: human

text: F

text: std

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Bowtie 0.12.5

characteristic: labversion

text: Homo sapiens

characteristic: organism

characteristic: replicate

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

text: live

text: Generic

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Millipore

characteristic: antibody vendorname

text: ATCC

text: neuroblastoma cell line, treatment: differentiated with retinoic acid, (Biedler, et al. Morphology and Growth, Tumorigenicity, and Cytogenetics of Human Neuroblastoma Cells in Continuous Culture. Cancer Research 33, 2643-2652, November 1973.)

characteristic: cell description

text: cancer

text: ectoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: F

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.5

text: Homo sapiens

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

characteristic: antibody antibodydescription

text: Histone H3 (tri-methyl K27). Marks promoters that are silenced by Polycomb proteins in a given lineage; large domains are found at inactive developmental loci.

text: Millipore

text: ATCC

characteristic: biomaterial provider

characteristic: cell

text: colorectal adenocarcinoma. (PMID: 1939345)

text: cancer

characteristic: cell karyotype

text: endoderm

text: human

text: M

text: std

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Bowtie 0.12.5

characteristic: labversion

text: Homo sapiens

characteristic: organism

characteristic: replicate

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

text: live

text: Generic

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Millipore

characteristic: antibody vendorname

text: ATCC

text: BJ

text: skin fibroblast, The line was established from skin taken from normal foreskin. - ATCC. (PMID: 9916803)

characteristic: cell description

text: normal

text: human

characteristic: cell organism

text: M

characteristic: cell sex

text: std

characteristic: control

text: Standard input signal for most experiments.

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.5

text: Homo sapiens

text: BJ

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

characteristic: antibody antibodydescription

text: Millipore

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM06990

characteristic: biomaterial provider

characteristic: cell

text: B-lymphocyte, lymphoblastoid, International HapMap Project, CEPH/Utah, treatment: Epstein-Barr Virus transformed

text: normal

characteristic: cell karyotype

text: mesoderm

characteristic: cell lineage

text: human

text: F

text: std

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Stamatoyannopoulous - University of Washington

text: Bowtie 0.12.5

characteristic: labversion

text: Homo sapiens

characteristic: organism

characteristic: replicate

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: rabbit polyclonal. Antibody Target: H3K36me3

text: Histone H3 (tri-methyl K36). Marks regions of RNAPII elongation, including coding and non-coding transcripts.

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Abcam

characteristic: antibody vendorname

text: ATCC

characteristic: cell description

text: cancer

text: endoderm

text: human

characteristic: cell organism

text: M

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.5

text: Homo sapiens

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

characteristic: antibody antibodydescription

text: Abcam

text: ATCC

characteristic: biomaterial provider

text: BJ

characteristic: cell

text: normal

characteristic: cell karyotype

text: human

text: M

text: std

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Bowtie 0.12.5

characteristic: labversion

text: Homo sapiens

characteristic: organism

characteristic: replicate

text: BJ

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC first public

text: live

text: Generic

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Millipore

characteristic: antibody vendorname

text: ATCC

text: cervical carcinoma

characteristic: cell description

text: cancer

text: ectoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: F

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.5

text: Homo sapiens

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

characteristic: antibody antibodydescription

text: Abcam

text: ATCC

characteristic: biomaterial provider

characteristic: cell

text: cancer

characteristic: cell karyotype

text: ectoderm

text: human

text: F

text: std

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Bowtie 0.12.5

characteristic: labversion

text: Homo sapiens

characteristic: organism

characteristic: replicate

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

text: live

text: Generic

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Millipore

characteristic: antibody vendorname

text: ATCC

characteristic: cell description

text: cancer

text: ectoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: F

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.5

text: Homo sapiens

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

characteristic: antibody antibodydescription

text: Abcam

text: ATCC

characteristic: biomaterial provider

characteristic: cell

text: hepatocellular carcinoma

text: cancer

characteristic: cell karyotype

text: endoderm

text: human

text: M

text: std

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Bowtie 0.12.5

characteristic: labversion

text: Homo sapiens

characteristic: organism

characteristic: replicate

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

text: live

text: Generic

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Abcam

characteristic: antibody vendorname

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM12878

text: B-lymphocyte, lymphoblastoid, International HapMap Project - CEPH/Utah - European Caucasion, Epstein-Barr Virus

characteristic: cell description

text: normal

text: mesoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: F

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.5

text: Homo sapiens

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

characteristic: antibody antibodydescription

text: Abcam

characteristic: biomaterial provider

characteristic: cell

text: normal

characteristic: cell karyotype

text: mesoderm

text: human

text: F

text: std

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Bowtie 0.12.5

characteristic: labversion

text: Homo sapiens

characteristic: organism

characteristic: replicate

characteristic: title

text: No special treatment or protocol applies


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

text: live

text: Generic

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Millipore

characteristic: antibody vendorname

text: Lonza

text: SKMC

text: skeletal muscle cells

characteristic: cell description

text: normal

text: mesoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: U

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.7

text: Homo sapiens

text: SKMC

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

characteristic: antibody antibodydescription

text: Millipore

text: Dr. Carl Mann, SBIGeM

characteristic: biomaterial provider

characteristic: cell

text: embryonic lung fibroblast cells, hTERT immortalized, includes Raf1 construct

text: normal

characteristic: cell karyotype

text: endoderm

text: human

text: F

text: std

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Bowtie 0.12.7

characteristic: labversion

text: Homo sapiens

characteristic: organism

characteristic: replicate

text: UW_ChipSeq_WI-38_H3K4me3_4OHTAM_20nM_72hr

characteristic: title

characteristic: treatment

text: 72 hours with 20 nM 4-hydroxytamoxifen (Stam)


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: rabbit polyclonal. Antibody Target: H3K4me3

text: Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Millipore

characteristic: antibody vendorname

text: Lonza

text: RPTEC

text: renal proximal tubule epithelial cells

characteristic: cell description

text: normal

text: human

characteristic: cell organism

text: U

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.7

text: Homo sapiens

text: RPTEC

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Input

characteristic: antibody

text: Control signal which may be subtracted from experimental raw signal before peaks are called.

characteristic: antibody description

text: Lonza

characteristic: biomaterial provider

text: RPTEC

characteristic: cell

text: renal proximal tubule epithelial cells

text: normal

characteristic: cell karyotype

text: human

text: U

text: std

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Bowtie 0.12.7

characteristic: labversion

text: Homo sapiens

characteristic: organism

characteristic: replicate

text: RPTEC

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC first public

text: live

text: Generic

characteristic: antibody antibodydescription

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Millipore

characteristic: antibody vendorname

text: Dr. Torok-Storb, FHCRC

text: HFF

text: foreskin fibroblast

characteristic: cell description

text: normal

text: human

characteristic: cell organism

text: M

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.7

text: Homo sapiens

text: HFF

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Input

characteristic: antibody

characteristic: antibody description

text: Dr. Torok-Storb, FHCRC

characteristic: biomaterial provider

text: HFF

characteristic: cell

text: foreskin fibroblast

text: normal

characteristic: cell karyotype

text: human

text: M

text: std

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Bowtie 0.12.7

characteristic: labversion

text: Homo sapiens

characteristic: organism

characteristic: replicate

text: HFF

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

text: live

text: Generic

characteristic: antibody antibodydescription

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Millipore

characteristic: antibody vendorname

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM12866

text: B-lymphocyte, lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, treatment: Epstein-Barr Virus transformed.

characteristic: cell description

text: normal

text: mesoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: M

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.7

text: Homo sapiens

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

characteristic: antibody antibodydescription

text: Millipore

text: Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM12875

characteristic: biomaterial provider

characteristic: cell

text: B-lymphocyte, lymphoblastoid, International HapMap Project, CEPH/Utah pedigree 1459, treatment: Epstein-Barr Virus transformed

text: normal

characteristic: cell karyotype

text: mesoderm

text: human

text: F

text: std

text: Standard input signal for most experiments.

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Bowtie 0.12.7

characteristic: labversion

text: Homo sapiens

characteristic: organism

characteristic: replicate

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

text: live

text: Generic

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Millipore

characteristic: antibody vendorname

text: ATCC

text: promyelocytic leukemia cells, (PMID: 276884)

characteristic: cell description

text: cancer

text: mesoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: F

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

text: Stamatoyannopoulous - University of Washington

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.5

text: Homo sapiens

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Input

characteristic: antibody

characteristic: antibody description

text: Dr. Carl Mann, SBIGeM

characteristic: biomaterial provider

characteristic: cell

text: normal

characteristic: cell karyotype

text: endoderm

text: human

text: F

text: std

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Bowtie 0.12.7

characteristic: labversion

text: Homo sapiens

characteristic: organism

characteristic: replicate

characteristic: title

characteristic: treatment


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Input

text: S. Heimfeld Laboratory, FHCRC

text: Monocytes-CD14+ are CD14-positive cells from human leukapheresis production, from donor RO 01746 (draw 1 ID is RO 01746, draw 2 ID is RO 01826), Monocytes-CD14+_RO01746 and Monocytes-CD14+_RO01826 are being used as replicates, newly promoted to tier 2: not in 2011 analysis

characteristic: cell description

text: normal

text: mesoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: F

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.7

text: Homo sapiens

text: UW_ChipSeq_Monocytes-CD14+_RO01746_Input

characteristic: treatment description


text: ENCODE DCC

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

characteristic: antibody antibodydescription

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Millipore

characteristic: antibody vendorname

text: S. Heimfeld Laboratory, FHCRC

characteristic: biomaterial provider

characteristic: cell

text: normal

characteristic: cell karyotype

text: mesoderm

text: human

text: F

text: std

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Bowtie 0.12.7

characteristic: labversion

text: Homo sapiens

characteristic: organism

characteristic: replicate

text: UW_ChipSeq_Monocytes-CD14+_RO01746_H3K4me3

characteristic: title


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: rabbit polyclonal. Antibody Target: H3K36me3

text: Histone H3 (tri-methyl K36). Marks regions of RNAPII elongation, including coding and non-coding transcripts.

text: Abcam

text: Lonza

text: SAEC

text: small airway epithelial cells

characteristic: cell description

text: normal

text: endoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: U

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.5

text: Homo sapiens

text: SAEC

text: No special treatment or protocol applies

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Input

characteristic: antibody

characteristic: antibody description

text: ScienCell

characteristic: biomaterial provider

text: HAc

characteristic: cell

text: astrocytes-cerebellar

text: normal

characteristic: cell karyotype

text: ectoderm

text: human

text: U

text: std

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Bowtie 0.12.7

characteristic: labversion

text: Homo sapiens

characteristic: organism

characteristic: replicate

text: HAc

characteristic: title


text: ENCODE DCC

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: rabbit polyclonal. Antibody Target: H3K27me3

characteristic: antibody antibodydescription

text: Histone H3 (tri-methyl K27). Marks promoters that are silenced by Polycomb proteins in a given lineage; large domains are found at inactive developmental loci.

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Millipore

characteristic: antibody vendorname

text: ATCC

text: leukemia, The continuous cell line K-562 was established by Lozzio and Lozzio from the pleural effusion of a 53-year-old female with chronic myelogenous leukemia in terminal blast crises. - ATCC

characteristic: cell description

text: cancer

text: mesoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: F

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.5

text: Homo sapiens


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: rabbit polyclonal. Antibody Target: H3K4me3

text: Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.

text: Millipore

text: Rajinder Kaul, UW

characteristic: biomaterial provider

text: primary cell

characteristic: biomaterial type

characteristic: cell

text: B cells, caucasian, draw number 1, newly promoted to tier 2: not in 2011 analysis

text: normal

characteristic: cell karyotype

text: mesoderm

text: human

text: F

text: B cell

characteristic: cell type

text: std

text: ChipSeq

text: Chromatin IP Sequencing

characteristic: donor id

text: UW

text: Bowtie 0.12.7

characteristic: labversion

text: Homo sapiens

characteristic: organism

characteristic: replicate

characteristic: title

characteristic: treatment description


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: antibody antibodydescription

characteristic: antibody targetdescription

characteristic: antibody vendorid

text: Abcam

characteristic: antibody vendorname

text: ATCC

text: cervical carcinoma

characteristic: cell description

text: cancer

text: ectoderm

characteristic: cell lineage

text: human

characteristic: cell organism

text: F

characteristic: cell sex

text: std

characteristic: control

characteristic: control description

characteristic: controlid

text: ChipSeq

characteristic: datatype

text: Chromatin IP Sequencing

characteristic: datatype description

text: UW

characteristic: lab

characteristic: lab description

characteristic: labexpid

text: Bowtie 0.12.5

text: Homo sapiens


characteristic: External Id

text: ENCODE DCC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: antibody

text: Millipore

text: ATCC

characteristic: biomaterial provider

characteristic: cell

text: hepatocellular carcinoma

text: cancer

characteristic: cell karyotype

text: endoderm

text: human

text: M

text: std

text: ChipSeq

text: Chromatin IP Sequencing

text: UW

text: Bowtie 0.12.5

characteristic: labversion

text: Homo sapiens

characteristic: organism

characteristic: replicate

characteristic: title

characteristic: treatment description