text: NAAS, RDA, Korea

text: live

text: Generic

text: heavy metal-contaminated upland soil HG1

text: soil metagenome


status: PUBLIC

characteristic: External Id

text: NAAS, RDA, Korea

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: normal upland soil HG5

characteristic: description

text: soil metagenome

characteristic: organism

text: normal upland soil HG5

characteristic: title


text: NAAS, RDA, Korea

text: live

text: Generic

text: heavy metal-contaminated upland soil Y1

text: soil metagenome

text: heavy metal-contaminated upland soil Y1


text: NAAS, RDA, Korea

text: live

text: Generic

text: normal upland soil YH1

text: soil metagenome

text: normal upland soil YH1


text: IMBA-Institute of Molecular Biotechnology of Austrian Academy of Sciences

text: live

text: Generic

text: wild-type

tag: attribute

characteristic: genotype/variation

text: DNA

characteristic: molecule subtype

text: Drosophila melanogaster

text: Ovarian Somatic Cells (OSC)

characteristic: tissue/cell type

text: DNA-seq from OSC


text: live

text: Generic

text: wild-type

text: total nascent RNA

text: Drosophila melanogaster

text: total nascent RNA_wild-type OSCs

text: Ovarian Somatic Cells (OSC)

text: total nascent RNA from wild-type ovarian somatic cells


text: live

text: Generic

text: RNAi piwi

text: total nascent RNA

text: Drosophila melanogaster

text: total nascent RNA_Piwi-KD OSCs

text: 96h after transfection

characteristic: stage

text: Ovarian Somatic Cells (OSC)

text: total nascent RNA from Piwi-KD ovarian somatic cells


text: live

text: Generic

text: wild-type

text: total RNA

text: Drosophila melanogaster

text: small RNAs (18-29nt)_wild-type OSCs

text: Ovarian Somatic Cells (OSC)

text: small RNAs (18-29nt) from wild-type ovarian somatic cells


text: live

text: Generic

text: RNAi gfp

text: total RNA

text: Drosophila melanogaster

text: ribosomal RNA-depleted total RNA_GFP-KD

text: 96h after transfection

text: Ovarian Somatic Cells (OSC)

text: ribosomal RNA-depleted total RNA from GFP-KD


text: live

text: Generic

text: RNAi armi

text: total RNA

text: Drosophila melanogaster

text: ribosomal RNA-depleted total RNA_Armi-KD

text: 96h after transfection

text: Ovarian Somatic Cells (OSC)

text: ribosomal RNA-depleted total RNA from Armi-KD


text: live

text: Generic

text: RNAi piwi

text: total RNA

text: Drosophila melanogaster

text: ribosomal RNA-depleted total RNA_Piwi-KD

text: 96h after transfection

text: Ovarian Somatic Cells (OSC)

text: ribosomal RNA-depleted total RNA from Piwi-KD


text: live

text: Generic

text: RNAi mael

text: total RNA

text: Drosophila melanogaster

text: ribosomal RNA-depleted total RNA_Mael-KD

text: 96h after transfection

text: Ovarian Somatic Cells (OSC)

text: ribosomal RNA-depleted total RNA from Mael-KD


text: live

text: Generic

characteristic: chip antibody

text: abcam

characteristic: chip antibody vendor

text: RNAi gfp

text: H3K9m3-bound DNA

text: Drosophila melanogaster

text: H3K9m3 ChIP-seq_GFP-KD

text: 96h after transfection

text: Ovarian Somatic Cells (OSC)

text: H3K9m3 ChIP-seq from GFP-KD rep1


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: abcam

text: RNAi mael

text: H3K9m3-bound DNA

text: Drosophila melanogaster

text: H3K9m3 ChIP-seq_Mael-KD

text: 96h after transfection

text: Ovarian Somatic Cells (OSC)

text: H3K9m3 ChIP-seq from Mael-KD rep1


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: abcam

text: RNAi piwi

text: H3K9m3-bound DNA

text: Drosophila melanogaster

text: H3K9m3 ChIP-seq_Piwi-KD

text: 96h after transfection

text: Ovarian Somatic Cells (OSC)

text: H3K9m3 ChIP-seq from Piwi-KD rep1


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: abcam

text: RNAi gfp

text: H3K9m3-bound DNA

text: Drosophila melanogaster

text: H3K9m3 ChIP-seq_GFP-KD

text: 96h after transfection

text: Ovarian Somatic Cells (OSC)

text: H3K9m3 ChIP-seq from GFP-KD rep2


text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: abcam

text: RNAi mael

text: H3K9m3-bound DNA

text: Drosophila melanogaster

text: H3K9m3 ChIP-seq_Mael-KD

text: 96h after transfection

text: Ovarian Somatic Cells (OSC)

text: H3K9m3 ChIP-seq from Mael-KD rep2


text: live

text: Generic

characteristic: SRA accession

text: abcam

text: RNAi piwi

text: H3K9m3-bound DNA

text: Drosophila melanogaster

text: H3K9m3 ChIP-seq_Piwi-KD

text: 96h after transfection

text: Ovarian Somatic Cells (OSC)

text: H3K9m3 ChIP-seq from Piwi-KD rep2


text: live

text: Generic

text: RNAi gfp

text: total DNA

text: Drosophila melanogaster

characteristic: organism

text: DNA input_GFP-KD

text: 96h after transfection

text: Ovarian Somatic Cells (OSC)

text: DNA input from GFP-KD rep1


text: live

text: Generic

text: RNAi mael

text: total DNA

text: Drosophila melanogaster

text: DNA input_Mael-KD

text: 96h after transfection

text: Ovarian Somatic Cells (OSC)

text: DNA input from Mael-KD rep1

characteristic: title


text: live

text: Generic

text: RNAi piwi

characteristic: genotype/variation

text: total DNA

text: Drosophila melanogaster

text: DNA input_Piwi-KD

text: 96h after transfection

text: Ovarian Somatic Cells (OSC)

text: DNA input from Piwi-KD rep1


text: live

text: Generic

text: RNAi gfp

text: total DNA

characteristic: molecule subtype

text: Drosophila melanogaster

text: DNA input_GFP-KD

text: 96h after transfection

text: Ovarian Somatic Cells (OSC)

text: DNA input from GFP-KD rep2


text: live

text: Generic

text: RNAi mael

text: total DNA

text: Drosophila melanogaster

text: DNA input_Mael-KD

text: 96h after transfection

text: Ovarian Somatic Cells (OSC)

characteristic: tissue/cell type

text: DNA input from Mael-KD rep2


text: live

text: Generic

text: RNAi piwi

text: total DNA

text: Drosophila melanogaster

text: DNA input_Piwi-KD

text: 96h after transfection

characteristic: stage

text: Ovarian Somatic Cells (OSC)

text: DNA input from Piwi-KD rep2


text: live

text: Generic

characteristic: chip antibody

text: gift of Karen Adelman; Adelman et al. Mol Cell 2005

characteristic: chip antibody information

text: RNAi gfp

text: Rpb3-bound DNA

text: Drosophila melanogaster

text: Rpb3 ChIP-seq_GFP-KD

text: 96h after transfection

text: Ovarian Somatic Cells (OSC)

text: Rpb3 ChIP-seq from GFP-KD rep1


characteristic: External Id

text: live

text: Generic

text: RNAi mael

text: Rpb3-bound DNA

text: Drosophila melanogaster

text: Rpb3 ChIP-seq_Mael-KD

text: 96h after transfection

text: Ovarian Somatic Cells (OSC)

text: Rpb3 ChIP-seq from Mael-KD rep1


characteristic: INSDC center name

text: live

text: Generic

text: RNAi piwi

text: Rpb3-bound DNA

text: Drosophila melanogaster

text: Rpb3 ChIP-seq_Piwi-KD

text: 96h after transfection

text: Ovarian Somatic Cells (OSC)

text: Rpb3 ChIP-seq from Piwi-KD rep1


characteristic: INSDC first public

text: live

text: Generic

text: RNAi gfp

text: Rpb3-bound DNA

text: Drosophila melanogaster

text: Rpb3 ChIP-seq_GFP-KD

text: 96h after transfection

text: Ovarian Somatic Cells (OSC)

text: Rpb3 ChIP-seq from GFP-KD rep2


characteristic: INSDC last update

text: live

text: Generic

text: RNAi mael

text: Rpb3-bound DNA

text: Drosophila melanogaster

text: Rpb3 ChIP-seq_Mael-KD

text: 96h after transfection

text: Ovarian Somatic Cells (OSC)

text: Rpb3 ChIP-seq from Mael-KD rep2


characteristic: INSDC secondary accession

text: live

text: Generic

text: RNAi piwi

text: Rpb3-bound DNA

text: Drosophila melanogaster

text: Rpb3 ChIP-seq_Piwi-KD

text: 96h after transfection

text: Ovarian Somatic Cells (OSC)

text: Rpb3 ChIP-seq from Piwi-KD rep2


text: live

characteristic: INSDC status

text: Generic

text: tj-Gal4>RNAi armi

text: Rpb3-bound DNA

text: Drosophila melanogaster

text: tj-GAL4>RNAi armi

text: from 5-6 days old flies

text: ovaries

text: tj-GAL4>RNAi armi rep1


text: live

text: Generic

characteristic: NCBI submission model

text: tj-Gal4>RNAi tej

text: Rpb3-bound DNA

text: Drosophila melanogaster

text: tj-GAL4>RNAi tej

text: from 5-6 days old flies

text: ovaries

text: tj-GAL4>RNAi tej rep1


text: live

text: Generic

characteristic: NCBI submission package

text: tj-Gal4>RNAi armi

text: Rpb3-bound DNA

text: Drosophila melanogaster

text: tj-GAL4>RNAi armi

text: from 5-6 days old flies

text: ovaries

text: tj-GAL4>RNAi armi rep2


text: live

text: Generic

characteristic: SRA accession

text: tj-Gal4>RNAi tej

text: Rpb3-bound DNA

text: Drosophila melanogaster

text: tj-GAL4>RNAi tej

text: from 5-6 days old flies

text: ovaries

text: tj-GAL4>RNAi tej rep2


text: live

text: Generic

text: flamOR(P)

text: total RNA

text: Drosophila melanogaster

characteristic: organism

text: small RNAs_permissive

text: from 5-6 days old flies

text: ovaries

text: small RNAs (18-29nt) from permissive


text: live

text: Generic

text: flamRev(R)

text: total RNA

text: Drosophila melanogaster

text: small RNAs_restrictive

text: from 5-6 days old flies

text: ovaries

text: small RNAs (18-29nt) from restrictive

characteristic: title


text: Kunming Institute of Zoology Chinese Academy of Sciences

text: live

text: Generic

text: adjacent nonaffected tissue to colorectal adenocarcinoma

characteristic: description

text: human metagenome

text: Normal tissue from colorectal mucosa of subject S001


text: live

text: Generic

text: human metagenome

text: Normal tissue from colorectal mucosa of subject S002


text: live

text: Generic

text: human metagenome

text: Normal tissue from colorectal mucosa of subject S004


text: live

text: Generic

text: human metagenome

text: Normal tissue from colorectal mucosa of subject S005


text: live

text: Generic

text: human metagenome

text: Normal tissue from colorectal mucosa of subject S006


text: live

text: Generic

text: human metagenome

text: Normal tissue from colorectal mucosa of subject S007


text: live

text: Generic

text: human metagenome

text: Normal tissue from colorectal mucosa of subject S008


text: live

text: Generic

text: human metagenome

text: Normal tissue from colorectal mucosa of subject S009


text: live

text: Generic

text: Tumor tissue

text: human metagenome

text: Tumor tissue from colorectal cancer of subject S001


text: live

text: Generic

text: Tumor tissue

text: human metagenome

text: Tumor tissue from colorectal cancer of subject S002


text: live

text: Generic

text: Tumor tissue

text: human metagenome

text: Tumor tissue from colorectal cancer of subject S004


text: live

text: Generic

text: Tumor tissue

text: human metagenome

text: Tumor tissue from colorectal cancer of subject S005


text: live

text: Generic

text: Tumor tissue

text: human metagenome

text: Tumor tissue from colorectal cancer of subject S006


text: live

text: Generic

text: Tumor tissue

text: human metagenome

text: Tumor tissue from colorectal cancer of subject S007


text: live

text: Generic

text: Tumor tissue

text: human metagenome

text: Tumor tissue from colorectal cancer of subject S008


text: Kunming Institute of Zoology Chinese Academy of Sciences

text: live

text: Generic

text: Tumor tissue

text: human metagenome

text: Tumor tissue from colorectal cancer of subject S009


Great Snipe 40396

text: Uppsala University

text: live

text: Generic

text: Great Snipe male no 40396, Lek AH, Gavalia, central Norway, mating success = 1

text: Gallinago media

text: Sample ID 3


Great Snipe 35580

text: Uppsala University

text: live

text: Generic

text: Great Snipe male no 35580, Lek AH, Gavalia, central Norway, mating success = 3

text: Gallinago media

text: Sample ID 4


Great Snipe 40389

text: Uppsala University

text: live

text: Generic

text: Great Snipe male no 40389, Lek AH, Gavalia, central Norway, mating success = 0

text: Gallinago media

text: Sample ID 5


Great Snipe 40477

text: Uppsala University

text: live

text: Generic

text: Great Snipe male no 40477, Lek AH, Gavalia, central Norway, mating success = 3

text: Gallinago media

text: Sample ID 6


Great Snipe 34749

text: Uppsala University

text: live

text: Generic

text: Great Snipe male no 334749, Lek AH, Gavalia, central Norway, mating success = 0

text: Gallinago media

text: Sample ID 8


Great Snipe 34750

text: Uppsala University

text: live

text: Generic

text: Great Snipe male no 34750, Lek AH, Gavalia, central Norway, mating success = 5

text: Gallinago media

text: Sample ID 9


Great Snipe 34756

text: Uppsala University

text: live

text: Generic

text: Great Snipe male no 34756, Lek AH, Gavalia, central Norway, mating success = 0

text: Gallinago media

text: Sample ID 10


Great Snipe 35556

text: Uppsala University

text: live

text: Generic

text: Great Snipe male no 35556, Lek AH, Gavalia, central Norway, mating success = 0

text: Gallinago media

text: Sample ID 12


Great Snipe 34587

text: Uppsala University

text: live

text: Generic

text: Great Snipe male no 34587, Lek HN, Gavalia, central Norway, mating success = 2

text: Gallinago media

text: Sample ID 15


Great Snipe 34781

text: Uppsala University

text: live

text: Generic

text: Great Snipe male no 34781, Lek HN, Gavalia, central Norway, mating success = 0

text: Gallinago media

text: Sample ID 16


Great Snipe 36965

text: Uppsala University

text: live

text: Generic

text: Great Snipe male no 36965, Lek HN, Gavalia, central Norway, mating success = 2

text: Gallinago media

text: Sample ID 17


Great Snipe 40366

text: Uppsala University

text: live

text: Generic

text: Great Snipe male no 40366, Lek HN, Gavalia, central Norway, mating success = 2

text: Gallinago media

text: Sample ID 19


Great Snipe 40358

text: Uppsala University

text: live

text: Generic

text: Great Snipe male no 40358, Lek HN, Gavalia, central Norway, mating success = 2

text: Gallinago media

text: Sample ID 20


Great Snipe 40404

text: Uppsala University

text: live

text: Generic

text: Great Snipe male no 40404, Lek HN, Gavalia, central Norway, mating success = 1

text: Gallinago media

text: Sample ID 23


text: Genome Research Foundation

text: live

text: Generic

text: a tumor tissue sample of an intestinal type gastric cancer Korean patient.

text: Homo sapiens


text: Kun Zhang Laboratory, Bioengineering, University of California, San Diego

text: live

text: Generic

text: embryonic 13.5 day

characteristic: age

text: wild type

characteristic: genotype

text: Mus musculus

text: Primordial germ cells

characteristic: strain

text: Primordial germ cells

characteristic: tissue

text: WT rep1


text: live

text: Generic

text: embryonic 13.5 day

text: wild type

text: Mus musculus

text: Primordial germ cells

text: Primordial germ cells

text: WT rep2


text: live

text: Generic

text: embryonic 13.5 day

text: wild type

text: Mus musculus

text: Primordial germ cells

text: Primordial germ cells

text: WT rep3


text: live

text: Generic

text: embryonic 13.5 day

text: Tet1 -/-

text: Mus musculus

text: Primordial germ cells

text: Primordial germ cells

text: Tet1-KO rep1


text: live

text: Generic

text: embryonic 13.5 day

text: Tet1 -/-

text: Mus musculus

text: Primordial germ cells

text: Primordial germ cells

text: Tet1-KO rep2


text: Memorial SLoan-Kettering Cancer Center

text: live

text: Generic

text: embryonic fibroblasts

characteristic: cell type

text: Bax-/-, Bak-/-

characteristic: immortalization

text: Mus musculus

text: Mouse embryonic fibroblasts

text: Total RNA (d0)

text: Unstarved

characteristic: treatment


characteristic: External Id

text: Memorial SLoan-Kettering Cancer Center

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: embryonic fibroblasts

text: Bax-/-, Bak-/-

text: Mus musculus

text: Mouse embryonic fibroblasts

text: Total RNA (d5)

text: Glucose starved, 5 days


text: Memorial SLoan-Kettering Cancer Center

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: embryonic fibroblasts

text: Bax-/-, Bak-/-

text: Mus musculus

text: Mouse embryonic fibroblasts

text: Total RNA (d7)

text: Glucose starved, 5 days then glucose fed for 2 days


text: Memorial SLoan-Kettering Cancer Center

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: embryonic fibroblasts

text: Bax-/-, Bak-/-

text: Mouse Ago2 beads (Wako, cat# 299-67311)

characteristic: ip antibody

text: Mus musculus

text: Mouse embryonic fibroblasts

text: Ago2 IP (d0)

text: Unstarved


text: Memorial SLoan-Kettering Cancer Center

text: live

text: Generic

text: embryonic fibroblasts

text: Bax-/-, Bak-/-

text: Mouse Ago2 beads (Wako, cat# 299-67311)

text: Mus musculus

characteristic: organism

text: Mouse embryonic fibroblasts

text: Ago2 IP (d5)

characteristic: title

text: Glucose starved, 5 days


text: Memorial SLoan-Kettering Cancer Center

text: live

text: Generic

text: embryonic fibroblasts

text: Bax-/-, Bak-/-

characteristic: genotype

text: Mouse Ago2 beads (Wako, cat# 299-67311)

text: Mus musculus

text: Mouse embryonic fibroblasts

text: Ago2 IP (d7)


text: Pike Lab, Biochemistry, University of Wisconsin at Madison

text: live

text: Generic

text: VDR (Santa Cruz, C-20, sc-1008, lot# A0912)

characteristic: antibody

characteristic: cell line

text: Mus musculus

text: 5 - 12

characteristic: passage number

text: MC3T3-E1 cells

text: ethanol vehicle


text: live

text: Generic

text: Mus musculus

text: 5 - 12

text: MC3T3-E1 cells

text: 100nM 1,25(OH)2D3

characteristic: treatment


characteristic: External Id

text: live

text: Generic

text: RXR (Santa Cruz, ΔN-197, sc-774, lot# G2310)

text: Mus musculus

text: 5 - 12

text: MC3T3-E1 cells

text: ethanol vehicle


characteristic: INSDC center name

text: live

text: Generic

text: Mus musculus

text: 5 - 12

text: MC3T3-E1 cells

text: 100nM 1,25(OH)2D3


characteristic: INSDC first public

text: live

text: Generic

text: C/EBPβ (Santa Cruz, C-19, sc-150, lot# F3011)

text: Mus musculus

text: 5 - 12

text: MC3T3-E1 cells

text: ethanol vehicle


characteristic: INSDC last update

text: live

text: Generic

text: Mus musculus

text: 5 - 12

text: MC3T3-E1 cells

text: 100nM 1,25(OH)2D3


characteristic: INSDC secondary accession

text: live

text: Generic

text: RUNX2 (Santa Cruz, M-70, sc10758, lot# D1411)

text: Mus musculus

text: 5 - 12

text: MC3T3-E1 cells

text: ethanol vehicle


text: live

characteristic: INSDC status

text: Generic

text: Mus musculus

text: 5 - 12

text: MC3T3-E1 cells

text: 100nM 1,25(OH)2D3


text: live

text: Generic

characteristic: NCBI submission model

text: H4K5Ac (Millipore, 07-327, lot# DAM1794310)

text: Mus musculus

text: 5 - 12

text: MC3T3-E1 cells

text: ethanol vehicle


text: live

text: Generic

characteristic: NCBI submission package

text: Mus musculus

text: 5 - 12

text: MC3T3-E1 cells

text: 100nM 1,25(OH)2D3


text: live

text: Generic

characteristic: SRA accession

text: H3K9Ac (Millipore, 06-942, lot#31636)

text: Mus musculus

text: 5 - 12

text: MC3T3-E1 cells

text: ethanol vehicle


text: live

text: Generic

text: H3K9Ac (Millipore, 06-942, lot#31636)

text: Mus musculus

text: 5 - 12

text: MC3T3-E1 cells

text: 100nM 1,25(OH)2D3


text: live

text: Generic

text: H3K4me1 (Abcam, ab8895, lot# GR43807-1)

text: Mus musculus

text: 5 - 12

text: MC3T3-E1 cells

text: ethanol vehicle


text: live

text: Generic

text: H3K4me1 (Abcam, ab8895, lot# GR43807-1)

text: Mus musculus

text: 5 - 12

text: MC3T3-E1 cells

text: 100nM 1,25(OH)2D3


text: live

text: Generic

text: H3K4me3 (Abcam, ab1012, lot# GR10853-1)

text: Mus musculus

text: 5 - 12

text: MC3T3-E1 cells

text: ethanol vehicle


text: live

text: Generic

text: H3K4me3 (Abcam, ab1012, lot# GR10853-1)

text: Mus musculus

text: 5 - 12

text: MC3T3-E1 cells

text: 100nM 1,25(OH)2D3


text: live

text: Generic

text: H3K36me3 (Abcam, ab9050, lot# GR52625-1)

text: Mus musculus

text: 5 - 12

text: MC3T3-E1 cells

text: ethanol vehicle


text: live

text: Generic

text: Mus musculus

text: 5 - 12

text: MC3T3-E1 cells

text: 100nM 1,25(OH)2D3


text: live

text: Generic

text: MC3T3-E1 differentiated for 15 days

text: Mus musculus

text: 5 - 12

text: MC3T3-E1 cells differentiated for 15 days

text: ethanol vehicle


text: live

text: Generic

text: MC3T3-E1 differentiated for 15 days

text: Mus musculus

text: 5 - 12

text: 100nM 1,25(OH)2D3


text: live

text: Generic

text: MC3T3-E1 differentiated for 15 days

text: Mus musculus

text: 5 - 12

text: ethanol vehicle


text: live

text: Generic

text: MC3T3-E1 differentiated for 15 days

text: Mus musculus

text: 5 - 12

text: 100nM 1,25(OH)2D3


text: live

text: Generic

text: MC3T3-E1 differentiated for 15 days

text: Mus musculus

text: 5 - 12

text: ethanol vehicle


text: live

text: Generic

text: MC3T3-E1 differentiated for 15 days

text: Mus musculus

text: 5 - 12

text: 100nM 1,25(OH)2D3


text: live

text: Generic

text: MC3T3-E1 differentiated for 15 days

text: Mus musculus

text: 5 - 12

text: ethanol vehicle


text: live

text: Generic

text: MC3T3-E1 differentiated for 15 days

text: Mus musculus

text: 5 - 12

text: 100nM 1,25(OH)2D3


text: live

text: Generic

text: MC3T3-E1 differentiated for 15 days

text: Mus musculus

text: 5 - 12

text: ethanol vehicle


text: live

text: Generic

text: MC3T3-E1 differentiated for 15 days

text: Mus musculus

text: 5 - 12

text: 100nM 1,25(OH)2D3


text: live

text: Generic

text: H3K9Ac (Millipore, 06-942, lot#31636)

text: MC3T3-E1 differentiated for 15 days

text: Mus musculus

text: 5 - 12

text: ethanol vehicle


text: live

text: Generic

text: H3K9Ac (Millipore, 06-942, lot#31636)

text: MC3T3-E1 differentiated for 15 days

text: Mus musculus

text: 5 - 12

text: 100nM 1,25(OH)2D3


text: live

text: Generic

text: H3K4me1 (Abcam, ab8895, lot# GR43807-1)

text: MC3T3-E1 differentiated for 15 days

text: Mus musculus

text: 5 - 12

text: ethanol vehicle


text: live

text: Generic

text: H3K4me1 (Abcam, ab8895, lot# GR43807-1)

text: MC3T3-E1 differentiated for 15 days

text: Mus musculus

text: 5 - 12

text: 100nM 1,25(OH)2D3


text: live

text: Generic

text: H3K4me3 (Abcam, ab1012, lot# GR10853-1)

text: MC3T3-E1 differentiated for 15 days

text: Mus musculus

text: 5 - 12

text: ethanol vehicle


text: live

text: Generic

text: H3K4me3 (Abcam, ab1012, lot# GR10853-1)

text: MC3T3-E1 differentiated for 15 days

text: Mus musculus

text: 5 - 12

text: 100nM 1,25(OH)2D3


text: live

text: Generic

text: Mus musculus

text: 5 - 12

text: ethanol vehi differentiated for 15 dayscle


text: live

text: Generic

text: MC3T3-E1 differentiated for 15 days

text: Mus musculus

text: 5 - 12

text: 100nM 1,25(OH)2D3


text: live

text: Generic

text: Mus musculus

text: 5 - 12

text: MC3T3-E1 cells

text: ethanol vehicle


text: live

text: Generic

text: Mus musculus

text: 5 - 12

text: 100nM 1,25(OH)2D3


hydrothermal plume

text: Chinese National Human Genome Center at Shanghai

text: live

text: Generic

text: Nautilia profundicola AmH

text: AmH

characteristic: strain

text: Functional Analysis of Two Metagenomic Datasets from the Shallow-sea Hydrothermal Systems Offshore NE Taiwan


surface water

text: live

text: Generic

text: Hydrogenovibrio crunogenus XCL-2

characteristic: organism


text: University of Nevada, Las Vegas

text: live

text: Generic

text: Pooled, chimera-filtered pyrosequence reads used for assembly of a composite genome from 15 individual OP9 amplified single-cell genomes

characteristic: description

text: Candidatus Caldatribacterium californiense OP9-cSCG

characteristic: title


Kit /KitW-v testis

text: Whitehead Institute

text: live

text: Generic

text: We crossed C57BL/6J-KitW-v (The Jackson Laboratory) males to WB/ReJ-KitW (The Jackson Laboratory) females to generate KitW/KitW-v compound heterozygotes, which are germ cell deficient, and control Kit /KitW-v males. Two biological replicate testes from KitW/KitW-v and Kit /KitW-v males were collected at ~3 months of age. Total RNA, of 1-2ug, was extracted using Trizol (Invitrogen) according to manufacturer’s instructions. Hemoglobin transcripts were selectively removed from total RNA by following GLOBINclear (Ambion) protocol recommendations. As per the Illumina kit protocol, poly-A-selected mRNA was used to generate mRNA-seq cDNA libraries using random hexamer-primers. cDNA fragments of ~200 nucleotides were isolated and modified for sequencing following the mRNA-seq protocol (Illumina). Illumina Genome Analyzer II was used to sequence 36-mers from the mRNA-seq libraries by following the manufacturer's recommendations.

text: Mus musculus musculus

text: Kit/KitW-v_1 mRNA-seq mouse testis


text: Washington University, Genome Sequencing Center

text: live

text: Generic

text: Necator americanus

text: Sample from Necator americanus


text: live

text: Generic

text: L3 larvae (exsheathed)

characteristic: life cycle stage information

text: Necator americanus

text: Sample from Necator americanus


Kit /KitWv_2 testis

text: Whitehead Institute

text: live

text: Generic

text: Mus musculus musculus

text: Kit/KitWv_2 testis mRNA-seq testis


KitW/KitWv_1 testis

text: Whitehead Institute

text: live

text: Generic

text: Mus musculus musculus

text: KitW/KitWv_1 testis mRNA-seq


KitW/KitWv_2 testis

text: Whitehead Institute

text: live

text: Generic

text: Mus musculus musculus

text: KitW/KitWv_2 testis mRNA-seq


text: NanJing Agricultural University

text: live

text: Generic

characteristic: collection date

text: 5th instar larvae

characteristic: dev-stage

text: eukaryote

characteristic: investigation type

text: Chilo suppressalis

text: sensitive to several pesticides

text: rice

characteristic: specific host

text: Taihu

text: laboratory-maintained insect colony

text: Genome DNA sample for 190 insert size library


characteristic: External Id

text: Beijing Genome Institute

characteristic: INSDC center name

text: live

text: Generic

text: Pyrus x bretschneideri

text: Sample from Pyrus x bretschneideri


text: Miami University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Arabidopsis thaliana

text: ChIP_Seq of Polyadenylation Factor PCFS4


text: Genome Research Foundation

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: A blood sample of an intestinal type gastric cancer Korean patient.

text: Homo sapiens


text: Statens Serum Institut

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: S. aureus ST291, spa type t3642

text: Staphylococcus aureus

text: Staphylococcus aureus ST291


text: Statens Serum Institut

text: live

text: Generic

characteristic: SRA accession

text: S. aureus ST291, spa type t779

text: Staphylococcus aureus

text: Staphylococcus aureus ST291, a distinct human clonal lineage


Alpine

text: University of Exeter

text: live

text: Generic

text: Pseudomonas syringae

characteristic: organism

text: he critical role of environmental reservoirs in emergence and evolution of Pseudomonas syringae crop pathogens


text: Research Center Borstel

text: live

text: Generic

text: Serial patient derived isolate. 72 bp reads (paired end) using Illumina technology.

characteristic: description

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis PAm26


text: Research Center Borstel

text: live

text: Generic

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis PAm36

characteristic: title


text: Research Center Borstel

text: live

text: Generic

text: Serial patient derived isolate. 46 bp reads (paired end) using Illumina technology.

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis PBm0


text: Research Center Borstel

text: live

text: Generic

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis PBm9


text: Research Center Borstel

text: live

text: Generic

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis PBm11


text: Research Center Borstel

text: live

text: Generic

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis PBm20


text: Research Center Borstel

text: live

text: Generic

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis PCm0


text: Research Center Borstel

text: live

text: Generic

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis PCm11


text: Research Center Borstel

text: live

text: Generic

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis PCm15


text: Research Center Borstel

text: live

text: Generic

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis PCm19


text: Research Center Borstel

text: live

text: Generic

text: Patient derived isolate. 72 bp reads (paired end) using Illumina technology.

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis T1


text: Research Center Borstel

text: live

text: Generic

text: Patient derived isolate. 46 bp reads (paired end) using Illumina technology.

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis K1


text: Landick Lab, Biochemistry, UW-Madison

text: live

text: Generic

text: wild-type

characteristic: genotype/variation

text: ribosome-depeleted RNA

characteristic: molecule subtype

text: Escherichia coli str. K-12 substr. MG1655

characteristic: strain

characteristic: substrain

text: MG1655 1


text: Landick Lab, Biochemistry, UW-Madison

text: live

text: Generic

text: wild-type

text: ribosome-depeleted RNA

text: MG1655 2


text: Landick Lab, Biochemistry, UW-Madison

text: live

text: Generic

text: wild-type

text: ribosome-depeleted RNA

text: MG1655 + 20 ug/ml bicyclomycin

text: MG1655 + 20 ug/ml bicyclomycin 1


text: Landick Lab, Biochemistry, UW-Madison

text: live

text: Generic

text: wild-type

text: ribosome-depeleted RNA

text: MG1655 + 20 ug/ml bicyclomycin

text: MG1655 + 20 ug/ml bicyclomycin 2


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_8


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_18


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample 19


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_20


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_21


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_c1c2


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_l2c2


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_l2l3


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_l4c1


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_l4l3


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_5


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_6


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_7


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_14


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_c41


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_c42


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_c45


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_c48


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_c51


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_c52


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_c54


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_c57


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_c61


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_c62


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_c63


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_c64


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_c65


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_c66


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_c73


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_c81


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_c82


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_c83


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_c84


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_c85


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_c87


text: Molecular Biology, NCMLS Radboud University Nijmegen

text: live

text: Generic

text: ES-cells

characteristic: cell type

characteristic: growth

characteristic: line

text: DNA methylation

characteristic: measurement

text: Mus musculus

text: Embryonic Stem cells


characteristic: External Id

text: Nanjing University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_c88


text: Nanjing University

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_c89


text: Nanjing University

text: live

text: Generic

characteristic: SRA accession

text: Arabidopsis thaliana

characteristic: organism

text: Arabidopsis Recombination Project Sample_c90

characteristic: title


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_c91


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_c92


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_c93


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_c94


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_c95


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_Col_G


text: Nanjing University

text: live

text: Generic

text: Arabidopsis thaliana

text: Arabidopsis Recombination Project Sample_Ler_XL_4


E10.5 PGC hmeDIP

text: University of Cambridge

text: live

text: Generic

text: E10.5 PGC hmeDIP

characteristic: label

text: Mus musculus

text: General Sample for Mus musculus


text: Laboratory of Cellular and Developmental Biology, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health

text: live

text: Generic

text: S2 late embryonic cells

characteristic: chip antibody

text: Drosophila melanogaster

characteristic: qualscores

text: S2 cells

text: tech_rep1_Rrp6_S2 [ChIP-Seq]


text: live

text: Generic

text: S2 late embryonic cells

characteristic: cell type

text: Drosophila melanogaster

text: S2 cells

text: tech_rep2_Rrp6_S2 [ChIP-Seq]


text: live

text: Generic

text: S2 late embryonic cells

text: Drosophila melanogaster

text: S2 cells

text: tech_rep1_Rrp40_S2 [ChIP-Seq]


text: live

text: Generic

text: S2 late embryonic cells

text: Drosophila melanogaster

text: S2 cells

text: tech_rep2_Rrp40_S2 [ChIP-Seq]


text: live

text: Generic

text: S2 late embryonic cells

text: Su(Hw)

text: Drosophila melanogaster

text: S2 cells

text: Suhw_S2 [ChIP-Seq]


text: live

text: Generic

text: S2 late embryonic cells

text: Drosophila melanogaster

text: S2 cells

text: tech_rep1_input_S2 [ChIP-Seq]


text: live

text: Generic

text: S2 late embryonic cells

text: Drosophila melanogaster

text: S2 cells

text: tech_rep2_input_S2 [ChIP-Seq]


text: live

text: Generic

text: S3 late embryonic cells

text: Drosophila melanogaster

text: S3 cells

text: tech_rep1_Rrp6_S3 [ChIP-Seq]


text: live

text: Generic

text: S3 late embryonic cells

text: Drosophila melanogaster

text: S3 cells

text: tech_rep2_Rrp6_S3 [ChIP-Seq]


text: live

text: Generic

text: S3 late embryonic cells

text: Drosophila melanogaster

text: S3 cells

text: tech_rep1_Rrp40_S3 [ChIP-Seq]


text: live

text: Generic

text: S3 late embryonic cells

text: Drosophila melanogaster

text: S3 cells

text: tech_rep2_Rrp40_S3 [ChIP-Seq]


text: live

text: Generic

text: S3 late embryonic cells

text: Su(Hw)

text: Drosophila melanogaster

text: S3 cells

text: Suhw_S3 [ChIP-Seq]


text: live

text: Generic

text: S3 late embryonic cells

text: Drosophila melanogaster

text: S3 cells

text: tech_rep1_input_S3 [ChIP-Seq]


text: live

text: Generic

text: S3 late embryonic cells

text: Drosophila melanogaster

text: S3 cells

text: tech_rep2_input_S3 [ChIP-Seq]


text: Institute for Genome Sciences University of MD School of Medicine

text: live

text: Generic

text: M. tuberculosis H37Rv

characteristic: TB strain

text: Generic

characteristic: biosamplemodel

characteristic: mouse id

text: mouse gut metagenome

text: H37Rv infected

characteristic: status

text: mouse gut metagenome H37Rv_1


characteristic: External Id

text: United States Department of Agriculture

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Glycine max

text: Reads not mapping to G. max 7hai with P. pachyrhizi


text: Hannon, CSHL

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Drosophila melanogaster

text: ovaries

characteristic: strain

text: ovaries

characteristic: tissue


text: Washington University, Genome Sequencing Center

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Poecilia formosa

characteristic: organism

text: Sample from Poecilia formosa

characteristic: title


name: Clostridium thermocellum 27405 RNA Seq from Populus and switchgrass fermentations

text: Oak Ridge National Laboratory

text: live

text: Generic

text: Clostridium thermocellum 27405 is an anaerobic, thermophilic, cellulolytic, and ethanogenic bacterium capable of directly converting cellulosic substrate into ethanol.

characteristic: description

text: Acetivibrio thermocellus ATCC 27405

text: ATCC 27405

text: Clostridium thermocellum 27405 RNA Seq (Illumina HiSeq2000) from Populus and switchgrass fermentations

text: type strain of Clostridium thermocellum

characteristic: type material


text: United States Department of Agriculture

text: live

text: Generic

text: Glycine max

text: Reads not mapping to G. max 48hai.


Horseshoe Crab Genome Reads

text: University of Connecticut

text: live

text: Generic

text: An individual sampled from Long Island Sound, DNA isolated from leg muscle tissue

text: Limulus polyphemus

text: Genome Reads


text: University of Calgary - Sun Center of Excellence for Visual Genomics

text: live

text: Generic

text: Berberis thunbergii


text: DOE Joint Genome Institute

text: live

text: Generic

text: Chamaesiphon sp. PCC 6505

text: Octopus sp. HBH-6

characteristic: sample number

text: PCC 6505

text: Sample from Octopus sp. HBH-6


text: DOE Joint Genome Institute

text: live

text: Generic

text: Cylindrospermum stagnale PCC 7417

text: Cylindrospermum stagnale PCC 7417

text: PCC 7417

text: Sample from Cylindrospermum stagnale PCC 7417


text: DOE Joint Genome Institute

text: live

text: Generic

text: Leptolyngbya sp. PCC 7104

text: Nodosilinea nodulosa PCC 7104

text: PCC 7104

text: Generic sample from Nodosilinea nodulosa PCC 7104


text: live

text: Generic

text: Jeffersonia diphylla


Transcriptome

text: University of Connecticut

text: live

text: Generic

text: Whole Genome Shotgun sequencing of horseshoe crab from waters of coast of Woods Hole, MA

text: Limulus polyphemus

text: Horseshoe Crab Transcriptome


text: live

text: Generic

text: Nandina domestica


text: DOE Joint Genome Institute

text: live

text: Generic

text: Nostoc sp. PCC 7524

text: Nostoc sp. PCC 7524

text: PCC 7524

text: Sample from Nostoc sp. PCC 7524


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Pleurocapsa sp. PCC 7327

text: Pleurocapsa sp. PCC 7327

text: PCC 7327

text: Sample from Pleurocapsa sp. PCC 7327


text: DOE Joint Genome Institute

text: live

text: Generic

text: Mastigocladopsis repens PCC 10914

text: Mastigocladopsis repens PCC 10914

text: PCC 10914

text: Sample from Mastigocladopsis repens PCC 10914


text: Harvard University

text: live

text: Generic

text: Homo sapiens

text: single cell amplification with MALBAC


text: live

text: Generic

text: Hydrangea macrophylla


text: School of Life Sciences, University of Nottingham

text: live

text: Generic

text: exponential

characteristic: growth phase

text: Haloferax volcanii

characteristic: relevant genotype

text: Genome DNA from cells in exponential phase (A650 =~ 0.1)


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: stationary

text: Haloferax volcanii

text: Genome DNA from cells in stationary phase (A650 > 1)


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: exponential

text: Haloferax volcanii

text: ∆pyrE2 ∆trpA ∆oriC1


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: stationary

text: Haloferax volcanii

text: ∆pyrE2 ∆trpA ∆oriC1


text: live

text: Generic

text: exponential

text: Haloferax volcanii

text: ∆pyrE2 ∆trpA ∆oriC2

characteristic: strain


text: live

text: Generic

characteristic: NCBI submission model

text: stationary

text: Haloferax volcanii

text: ∆pyrE2 ∆trpA ∆oriC2


text: live

text: Generic

characteristic: NCBI submission package

text: exponential

text: Haloferax volcanii

text: ∆pyrE2 ∆trpA ∆oriC3::trpA+


text: live

text: Generic

characteristic: SRA accession

text: stationary

text: Haloferax volcanii

text: ∆pyrE2 ∆trpA ∆oriC3::trpA+


text: live

text: Generic

text: exponential

text: Haloferax volcanii

characteristic: organism

text: ∆pyrE2 ∆trpA ∆oriC1 ∆oriC2 ∆oriC3::trpA+


text: live

text: Generic

text: stationary

text: Haloferax volcanii

characteristic: title


text: live

text: Generic

text: exponential

text: Haloferax volcanii

text: ∆pyrE2 ∆trpA ∆oriC1 ∆oriC2 ∆oriC3 ∆ori-pHV4::trpA+


text: live

text: Generic

text: stationary

text: Haloferax volcanii


text: University of Chicago

text: live

text: Generic

text: CEU (Centre d'Etude du Polymorphisme Humain from Utah of Northern European descent)individual NA10839

characteristic: description

text: Homo sapiens

text: CEU NA10839


text: live

text: Generic

text: Piper methysticum


text: University of Chicago

text: live

text: Generic

text: CEU (Centre d'Etude du Polymorphisme Humain from Utah of Northern European descent) individual NA10864

text: Homo sapiens

text: CEU individual NA10864


text: University of Chicago

text: live

text: Generic

text: CEU (Centre d'Etude du Polymorphisme Humain from Utah of Northern European descent) individual NA11881

text: Homo sapiens

text: CEU individual NA11881


text: University of Chicago

text: live

text: Generic

text: CEU (Centre d'Etude du Polymorphisme Humain from Utah of Northern European descent) individual NA12144

text: Homo sapiens

text: CEU individual NA12144


text: University of Chicago

text: live

text: Generic

text: CEU (Centre d'Etude du Polymorphisme Humain from Utah of Northern European descent) individual NA12248

text: Homo sapiens

text: CEU individual NA12248


text: University of Chicago

text: live

text: Generic

text: CEU (Centre d'Etude du Polymorphisme Humain from Utah of Northern European descent) individual NA12748

text: Homo sapiens

text: CEU individual NA12748


text: University of Chicago

text: live

text: Generic

text: CEU (Centre d'Etude du Polymorphisme Humain from Utah of Northern European descent) individual NA12762

text: Homo sapiens

text: CEU individual NA12762


text: University of Chicago

text: live

text: Generic

text: CEU (Centre d'Etude du Polymorphisme Humain from Utah of Northern European descent) individual NA07031

text: Homo sapiens

text: CEU individual NA07031


text: University of Chicago

text: live

text: Generic

text: CEU (Centre d'Etude du Polymorphisme Humain from Utah of Northern European descent) individual NA10855

text: Homo sapiens

text: CEU individual NA10855


text: University of Chicago

text: live

text: Generic

text: CEU (Centre d'Etude du Polymorphisme Humain from Utah of Northern European descent) individual NA11830

text: Homo sapiens

text: CEU individual NA11830


text: University of Chicago

text: live

text: Generic

text: CEU (Centre d'Etude du Polymorphisme Humain from Utah of Northern European descent) individual NA11839

text: Homo sapiens

text: CEU individual NA11839


text: University of Chicago

text: live

text: Generic

text: CEU (Centre d'Etude du Polymorphisme Humain from Utah of Northern European descent) individual NA12489

text: Homo sapiens

text: CEU individual NA12489


text: University of Chicago

text: live

text: Generic

text: CEU (Centre d'Etude du Polymorphisme Humain from Utah of Northern European descent) individual NA12874

text: Homo sapiens

text: CEU individual NA12874


text: University of Chicago

text: live

text: Generic

text: CEU (Centre d'Etude du Polymorphisme Humain from Utah of Northern European descent) individual NA12891

text: Homo sapiens

text: CEU individual NA12891


text: University of Calgary - Sun Center of Excellence for Visual Genomics

text: live

text: Generic

text: Diospyros kaki


text: live

text: Generic

text: Gypsophila vaccaria


text: live

text: Generic

text: Catharanthus longifolius


text: live

text: Generic

text: Catharanthus ovalis


text: DOE Joint Genome Institute

text: live

text: Generic

text: Fischerella sp. PCC 9431

text: Fischerella sp. PCC 9431

text: PCC 9431

text: Sample from Fischerella sp. PCC 9431


text: Heilongjiang Bayi Agricultural University

text: live

text: Generic

text: CGMCC: 3.3410. The cDNA library was made by using Mortierella isabellina. The cDNA were cloned directionally in the pGEM-T vector.

text: 7 days after fermentation

characteristic: dev-stage

text: Umbelopsis isabellina

text: 7 day fermentation products of Mortierella isabellina library

text: pGEM-T Easy Vector

characteristic: vector


text: Lee Gil-Ya Cancer and Diabetes Institution

text: live

text: Generic

text: Homo sapiens

text: Generic sample from Homo Sapiens


text: DOE Joint Genome Institute

text: live

text: Generic

text: Calothrix sp. PCC 7103

text: Calothrix sp. PCC 7103

characteristic: sample number

text: PCC 7103

text: Sample from Calothrix sp. PCC 7103


text: DOE Joint Genome Institute

text: live

text: Generic

text: Geitlerinema sp. PCC 7407

text: Octopus sp. HBH-B

text: PCC 7407

text: Sample from Octopus sp. HBH-B


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Microcoleus sp. PCC 7113

text: Allocoleopsis franciscana PCC 7113

text: PCC 7113

text: Sample from Allocoleopsis franciscana PCC 7113

text: reference strain of Allocoleopsis franciscana

characteristic: type material


characteristic: External Id

text: DOE Joint Genome Institute

text: live

text: Generic

text: Synechococcus sp. PCC 7336

text: Martensia sp. 3

text: PCC 7336

text: Sample from Martensia sp. 3


text: DOE Joint Genome Institute

characteristic: INSDC center name

text: live

text: Generic

text: Cyanobium gracile PCC 6307

text: Cyanobium gracile PCC 6307

text: PCC 6307

text: Sample from Cyanobium gracile PCC 6307


text: DOE Joint Genome Institute

characteristic: INSDC first public

text: live

text: Generic

text: Calothrix sp. PCC 7507

text: Calothrix sp. PCC 7507

text: PCC 7507

text: Sample from Calothrix sp. PCC 7507


text: DOE Joint Genome Institute

characteristic: INSDC last update

text: live

text: Generic

text: Stanieria cyanosphaera PCC 7437

text: Stanieria cyanosphaera PCC 7437

text: PCC 7437

text: Sample from Stanieria cyanosphaera PCC 7437


text: DOE Joint Genome Institute

characteristic: INSDC secondary accession

text: live

text: Generic

text: Pleurocapsa sp. PCC 7319

text: Pleurocapsa sp. PCC 7319

text: PCC 7319

text: Sample from Pleurocapsa sp. PCC 7319


text: DOE Joint Genome Institute

text: live

characteristic: INSDC status

text: Generic

text: Nostoc sp. PCC 7107

text: Nostoc sp. PCC 7107

text: PCC 7107

text: Sample from Nostoc sp. PCC 7107


text: DOE Joint Genome Institute

text: live

text: Generic

text: Cyanobacterium sp. PCC 10605

text: Cyanobacterium aponinum PCC 10605

text: PCC 10605

characteristic: strain

text: Sample from Cyanobacterium aponinum PCC 10605


text: DOE Joint Genome Institute

text: live

text: Generic

characteristic: NCBI submission model

text: Oscillatoria sp. PCC 6407

text: Kamptonema formosum PCC 6407

text: PCC 6407

text: Sample from Kamptonema formosum PCC 6407


text: Genome Research Foundation

text: live

text: Generic

characteristic: NCBI submission package

text: A tumor tissue sample of an intestinal type gastric cancer Korean patient.

text: Homo sapiens


text: Genome Research Foundation

text: live

text: Generic

characteristic: SRA accession

text: A blood sample of an interstinal type gastric cancer Korean patient. This sample is I-05B in the paper.

text: Homo sapiens


text: University of Exeter

text: live

text: Generic

text: Phytophthora ramorum

characteristic: organism

text: P. ramorum EU1 CC2275


text: University of Exeter

text: live

text: Generic

characteristic: collection-date

text: United Kingdom

characteristic: geo loc name

text: Rhododendron

characteristic: host

characteristic: isolate

text: Phytophthora ramorum

text: pure culture

characteristic: sample type

text: Phytophthora ramorum EU1 CC1011

characteristic: title


characteristic: External Id

text: University of Exeter

text: live

text: Generic

text: Phytophthora ramorum

text: EU1 CC12475

text: Phytophthora ramorum EU1 CC12475


text: University of Exeter

characteristic: INSDC center name

text: live

text: Generic

text: Phytophthora ramorum

text: EU1 CC2184

text: Phytophthora ramourm EU1 CC2184


text: University of Exeter

characteristic: INSDC first public

text: live

text: Generic

text: Phytophthora ramorum

text: EU1 CC14654

text: Phytophthora ramorum EU1 CC14654


text: University of Exeter

characteristic: INSDC last update

text: live

text: Generic

text: United Kingdom

characteristic: country

text: Viburnum

characteristic: nat-host

text: Phytophthora ramorum

text: Phytophthora ramorum EU1 CC1048


text: University of Exeter

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Phytophthora lateralis

text: Phytophthora lateralis MPF4


text: University of Exeter

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Phytophthora lateralis

text: Phytophthora lateralis MPF6


text: University of Exeter

text: live

text: Generic

characteristic: SRA accession

text: Phytophthora lateralis

characteristic: organism

text: Phytophthora lateralis SMST21


Ensete ventricosum

text: University of Exeter

text: live

text: Generic

text: Ensete ventricosum

text: plant was grown from seed supplied by JungleSeeds

text: Draft genome sequence of Ensete ventricosum


text: Shilatifard, Stowers Institute for Medical Research

text: live

text: Generic

text: Mouse Embryonic Fibroblasts (MEF)

characteristic: cell type

text: (rb) α-H3K27me3 (39155; Active Motif)

characteristic: chip antibody

text: MLL1 KO

characteristic: genotype/variation

text: Mus musculus

text: MEF MLL1(-/-)

characteristic: strain


text: live

text: Generic

text: Mouse Embryonic Fibroblasts (MEF)

text: (rb) α-H3K4me1 (39297;Active Motif)

text: MLL1 KO

text: Mus musculus

text: MEF MLL1(-/-)

characteristic: title


characteristic: External Id

text: live

text: Generic

text: Mouse Embryonic Fibroblasts (MEF)

text: MLL1 KO

text: Mus musculus

text: MEF MLL1(-/-)


characteristic: INSDC center name

text: live

text: Generic

text: Mouse Embryonic Fibroblasts (MEF)

text: (rb) α-H3K27me3 (39155; Active Motif)

text: MLL1 WT

text: Mus musculus

text: MEF MLL1(+/+)


characteristic: INSDC first public

text: live

text: Generic

text: Mouse Embryonic Fibroblasts (MEF)

text: (rb) α-H3K4me1 (39297;Active Motif)

text: MLL1 WT

text: Mus musculus

text: MEF MLL1(+/+)


characteristic: INSDC last update

text: live

text: Generic

text: Mouse Embryonic Fibroblasts (MEF)

text: MLL1 WT

text: Mus musculus

text: MEF MLL1(+/+)


text: live

text: Generic

text: Mouse Embryonic Fibroblasts (MEF)

text: (rb) α-H3K27me3 (39155; Active Motif)

text: MLL3 KO

text: Mus musculus

text: MEF MLL3(-/-)


text: live

text: Generic

text: Mouse Embryonic Fibroblasts (MEF)

text: (rb) α-H3K4me1 (39297;Active Motif)

text: MLL3 KO

text: Mus musculus

text: MEF MLL3(-/-)


text: live

text: Generic

text: Mouse Embryonic Fibroblasts (MEF)

text: MLL3 KO

text: Mus musculus

text: MEF MLL3(-/-)


text: live

text: Generic

text: Mouse Embryonic Fibroblasts (MEF)

text: (rb) α-H3K27me3 (39155; Active Motif)

text: MLL3 WT

text: Mus musculus

text: MEF MLL3(+/+)


text: live

text: Generic

text: Mouse Embryonic Fibroblasts (MEF)

text: (rb) α-H3K4me1 (39297;Active Motif)

text: MLL3 WT

text: Mus musculus

text: MEF MLL3(+/+)


text: live

text: Generic

text: Mouse Embryonic Fibroblasts (MEF)

text: MLL3 WT

text: Mus musculus

text: MEF MLL3(+/+)


S.tetraspora

text: Smith College

text: live

text: Generic

text: Subulatomonas tetraspora

text: General Sample for Subulatomonas tetraspora


text: Smith College

text: live

text: Generic

text: Corallomyxa tenera

text: General Sample for Corallomyxa tenera


text: Yale University

text: live

text: Generic

text: early round spermatid

text: mixed C57BL/6 and 129

characteristic: genetic background

text: Miwi+/-

characteristic: genotype

text: Mus musculus

text: early round spermtid

text: Miwi+/- early RS rep1


text: Yale University

characteristic: INSDC secondary accession

text: live

text: Generic

text: early round spermatid

text: mixed C57BL/6 and 129

text: Miwi+/-

text: Mus musculus

text: early round spermtid

text: Miwi+/- early RS rep2


text: Yale University

text: live

characteristic: INSDC status

text: Generic

text: early round spermatid

text: mixed C57BL/6 and 129

text: Miwi+/-

text: Mus musculus

text: early round spermtid

text: Miwi+/- early RS rep3


text: Yale University

text: live

text: Generic

characteristic: NCBI submission model

text: early round spermatid

text: mixed C57BL/6 and 129

text: Miwi-/-

text: Mus musculus

text: early round spermtid

text: Miwi-/- early RS rep1


text: Yale University

text: live

text: Generic

characteristic: NCBI submission package

text: early round spermatid

text: mixed C57BL/6 and 129

text: Miwi-/-

text: Mus musculus

text: early round spermtid

text: Miwi-/- early RS rep2


text: Yale University

text: live

text: Generic

characteristic: SRA accession

text: early round spermatid

text: mixed C57BL/6 and 129

text: Miwi-/-

text: Mus musculus

text: early round spermtid

text: Miwi-/- early RS rep3


text: University of Nottingham

text: live

text: Generic

text: Exponential

characteristic: growth phase

text: Escherichia coli str. K-12 substr. MG1655

characteristic: organism

text: F- rph-1

characteristic: relevant genotype

text: Genomic DNA

characteristic: substrain


text: University of Nottingham

text: live

text: Generic

text: Stationary

text: F- rph-1

text: Genomic DNA

characteristic: strain


text: University of Nottingham

text: live

text: Generic

text: Exponential

text: Escherichia coli

text: rpoB*35 ΔrecG::apra Δtus::cat tnaA::Tn10 dnaA46

text: Genomic DNA

characteristic: title


characteristic: External Id

text: University of Nottingham

text: live

text: Generic

text: Exponential

text: Escherichia coli

text: ΔlacIZYA ΔrecG::apra

text: Genomic DNA


text: University of Nottingham

characteristic: INSDC center name

text: live

text: Generic

text: Exponential

text: Escherichia coli

text: rpoB*35 ΔrecG::apra Δtus::cat

text: Genomic DNA


text: University of Nottingham

characteristic: INSDC first public

text: live

text: Generic

text: Exponential

text: Escherichia coli

text: ΔrecG::apra

text: Genomic DNA


text: University of Nottingham

characteristic: INSDC last update

text: live

text: Generic

text: Exponential

text: Escherichia coli

text: Δtus::cat

text: Genomic DNA


text: University of Nottingham

text: live

text: Generic

text: Stationary

text: Escherichia coli

text: Δtus::cat

text: Genomic DNA


text: University of Nottingham

text: live

text: Generic

text: Exponential

text: Escherichia coli

text: ΔrecG::apra Δtus::cat

text: Genomic DNA


text: University of Nottingham

text: live

text: Generic

text: Stationary

text: Escherichia coli

text: ΔrecG::apra Δtus::cat

text: Genomic DNA


text: University of Nottingham

text: live

text: Generic

text: Exponential

text: Escherichia coli

text: recG265::cat tos-kan

text: Genomic DNA


text: University of Nottingham

text: live

text: Generic

text: Exponential

text: Escherichia coli

text: recG265::cat tos-kan N15 lysogen

text: Genomic DNA


text: University of Nottingham

text: live

text: Generic

text: Exponential

text: Escherichia coli

text: Δlac

text: Genomic DNA


text: University of Nottingham

text: live

text: Generic

text: Stationary

text: Escherichia coli

text: Δlac

text: Genomic DNA


text: University of Nottingham

text: live

text: Generic

text: Stationary

text: Escherichia coli

text: ΔlacIZYA ΔrecG::apra

text: Genomic DNA


text: University of Nottingham

text: live

text: Generic

text: Exponential

text: Escherichia coli

text: priA300 ΔlacIZYA ΔrecG::apra

text: Genomic DNA


text: University of Nottingham

text: live

text: Generic

text: Exponential

text: Escherichia coli

text: ΔlacIZYA srgA1 ΔrecG::apra

text: Genomic DNA


text: University of Nottingham

text: live

text: Generic

text: Exponential

text: Escherichia coli

text: ΔlacIZYA ΔrecG::apra ΔpriB::dhfr

text: Genomic DNA


text: University of Nottingham

text: live

text: Generic

text: Exponential

text: Escherichia coli

text: ΔrecG263::kan recB268::Tn10

text: Genomic DNA


text: University of Nottingham

text: live

text: Generic

text: Exponential

text: Escherichia coli

text: rec+

text: Genomic DNA


text: University of Nottingham

text: live

text: Generic

text: Stationary

text: Escherichia coli

text: ΔlacIZYA<>frt

text: Genomic DNA


text: Yale University

text: live

text: Generic

text: Leptotene/Zygotene spermatocytes

characteristic: cell type

text: mixed C57BL/6 and 129

characteristic: genetic background

text: Miwi+/-

text: Mus musculus

text: Leptotene/Zygotene spermatocytes

text: L/Z


text: Yale University

characteristic: INSDC secondary accession

text: live

text: Generic

text: early-Pachytene spermatocytes

text: mixed C57BL/6 and 129

text: Miwi+/-

characteristic: genotype

text: Mus musculus

text: early-Pachytene spermatocytes

text: early-P


text: Yale University

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: mid-Pachytene spermatocytes

text: mixed C57BL/6 and 129

text: Miwi+/-

text: Mus musculus

text: mid-Pachytene spermatocytes

text: mid-P


text: Yale University

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: late-Pachytene/Diplotene spermatocytes

text: mixed C57BL/6 and 129

text: Miwi+/-

text: Mus musculus

text: late-Pachytene/Diplotene spermatocytes

text: late-P/D


text: Yale University

text: live

text: Generic

text: Round spermatids

text: mixed C57BL/6 and 129

text: Miwi+/-

text: Mus musculus

characteristic: organism

text: Round spermatids

text: RS


text: Yale University

text: live

text: Generic

text: 23 dpp

characteristic: age

text: Mus musculus

text: 23 dpp testes

text: testis

characteristic: tissue

text: Stambp-ps1+/- small RNA


text: Yale University

text: live

text: Generic

text: 23 dpp

text: Mus musculus

text: 23 dpp testes

text: testis

text: Stambp-ps1-/- small RNA


CS 2012

text: Tea Research Institute of Chinese Academy of Agricultural Sciences(TRI,CAAS)

text: live

text: Generic

text: Longjing 43

characteristic: cultivar

text: Tea is the most popular non-alcoholic health beverage in the world. Tea plant (Camellia sinensis (L.) O. Kuntze) needs to pass through a cold acclimation (CA) process to enhance their freezing tolerance in winter.To elucidate the molecular mechanisms of CA, we applied RNA-Seq technology to study the transcriptome profilings during CA procedure in tea plant. We selected three samples, including non-acclimated,acclimated and de-acclimated samples to prepare cDNA libaraies for RNA-seq. Finally,we obtained approximate 57.35 millions of RNA-Seq reads, and majority genes involved in many important cold-regulated or cold-related pathways were identified. Our study provided novel insights into molecular mechanisms of tea plant during CA process, giving a global survey for the activities of cold-related genes in tea plant during CA process. It could contribute to the in-depth study of the molecular mechanisms of cold resistance in tea plant and help to explore the functions of candidate cold-related genes for improving the ability of low-temperature tolerance through genetic engineering in tea plant.

characteristic: description

text: Camellia sinensis var. sinensis

text: mature leaf

text: Transcriptome profilings changes during cold acclimation procedure in tea plant by RNA-Seq


characteristic: External Id

text: Institute for Genome Sciences University of MD School of Medicine

text: live

text: Generic

text: M. tuberculosis H37Rv

characteristic: TB strain

text: Generic

characteristic: biosamplemodel

characteristic: mouse id

text: mouse gut metagenome

text: H37Rv infected

characteristic: status

text: mouse gut metagenome H37Rv_2

characteristic: title


text: Yale University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: 6 dpp

characteristic: genetic background

text: Mus musculus

text: 6 dpp testis

characteristic: strain

text: testis

text: 6 dpp


text: Yale University

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: 10 dpp

text: Mus musculus

characteristic: organism

text: 10 dpp testis

text: testis

text: 10 dpp


characteristic: External Id

text: Yale University

text: live

text: Generic

text: 15 dpp

characteristic: age

text: Mus musculus

text: 15 dpp testis

text: testis

characteristic: tissue

text: 15 dpp


text: Yale University

text: live

text: Generic

text: 18 dpp

text: Mus musculus

text: 18 dpp testis

text: testis

text: 18 dpp


text: Yale University

text: live

text: Generic

text: 22 dpp

text: Mus musculus

text: 22 dpp testis

text: testis

text: 22 dpp


text: Yale University

text: live

text: Generic

text: 28 dpp

text: Mus musculus

text: 28 dpp testis

text: testis

text: 28 dpp


text: Yale University

text: live

text: Generic

text: 40 dpp

text: Mus musculus

text: 40 dpp testis

text: testis

text: 40 dpp


name: 1133445265040 Sally gDNA, muscle Sal-SE-PRJNA72713 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: Sally muscle

characteristic: description

text: Salmo salar

text: muscle

text: Salmo salar muscle


text: live

text: Generic

text: M. tuberculosis CDC1551

characteristic: TB strain

text: Generic

characteristic: day

characteristic: mouse id

text: mouse gut metagenome

text: CDC1551 infected

characteristic: status

text: mouse gut metagenome M2_post_123

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: CDC1551 infected

text: mouse gut metagenome M1_post_13


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: CDC1551 infected

text: mouse gut metagenome M2_post_34


characteristic: External Id

text: live

text: Generic

characteristic: SRA accession

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

characteristic: organism

text: pre-infection

text: mouse gut metagenome M1_pre_1


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

characteristic: biosamplemodel

text: mouse gut metagenome

text: CDC1551 infected

text: mouse gut metagenome M1_post_55


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: CDC1551 infected

text: mouse gut metagenome M3_post_34


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: pre-infection

text: mouse gut metagenome M2_pre_0


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: CDC1551 infected

text: mouse gut metagenome M2_post_6


text: live

text: Generic

text: M. tuberculosis H37Rv

text: Generic

text: mouse gut metagenome

text: H37Rv infected

text: mouse gut metagenome H37Rv_3


text: live

text: Generic

text: M. tuberculosis H37Rv

text: Generic

text: mouse gut metagenome

text: H37Rv infected

text: mouse gut metagenome H37Rv_4


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: CDC1551 infected

text: mouse gut metagenome M1_post_81


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: pre-infection

text: mouse gut metagenome M1_pre_0


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: CDC1551 infected

text: mouse gut metagenome M1_post_6


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: CDC1551 infected

text: mouse gut metagenome M1_post_75


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: pre-infection

text: mouse gut metagenome M2_pre_1


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: pre-infection

text: mouse gut metagenome M2_pre_5


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: CDC1551 infected

text: mouse gut metagenome M3_post_102


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: CDC1551 infected

text: mouse gut metagenome M3_post_13


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: CDC1551 infected

text: mouse gut metagenome M2_post_13


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: CDC1551 infected

text: mouse gut metagenome M2_post_150


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: CDC1551 infected

text: mouse gut metagenome M2_post_158


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: CDC1551 infected

text: mouse gut metagenome M2_post_162


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: pre-infection

text: mouse gut metagenome M3_pre_1


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: pre-infection

text: mouse gut metagenome M3_pre_0


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: CDC1551 infected

text: mouse gut metagenome M3_post_95


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: CDC1551 infected

text: mouse gut metagenome M3_post_6


text: live

text: Generic

text: M. tuberculosis H37Rv

text: Generic

text: mouse gut metagenome

text: H37Rv infected

text: mouse gut metagenome H37Rv_5


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: CDC1551 infected

text: mouse gut metagenome M2_post_69


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: pre-infection

text: mouse gut metagenome M1_pre_5


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: CDC1551 infected

text: mouse gut metagenome M1_post_34


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: CDC1551 infected

text: mouse gut metagenome M3_post_69


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: pre-infection

text: mouse gut metagenome M3_pre_5


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: CDC1551 infected

text: mouse gut metagenome M2_post_95


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: CDC1551 infected

text: mouse gut metagenome M5_post_6


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: pre-infection

text: mouse gut metagenome M5_pre_0


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: CDC1551 infected

text: mouse gut metagenome M5_post_95


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: CDC1551 infected

text: mouse gut metagenome M5_post_69


text: live

text: Generic

text: control

text: Generic

text: mouse gut metagenome

text: uninfected

text: mouse gut metagenome uninfected_1


text: live

text: Generic

text: control

text: Generic

text: mouse gut metagenome

text: uninfected

text: mouse gut metagenome uninfected_2


text: live

text: Generic

text: control

text: Generic

text: mouse gut metagenome

text: uninfected

text: mouse gut metagenome uninfected_3


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: pre-infection

text: mouse gut metagenome M4_pre_5


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: CDC1551 infected

text: mouse gut metagenome M4_post_34


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: CDC1551 infected

text: mouse gut metagenome M5_post_13


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: CDC1551 infected

text: mouse gut metagenome M4_post_55


text: live

text: Generic

text: control

text: Generic

text: mouse gut metagenome

text: uninfected

text: mouse gut metagenome uninfected_4


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: pre-infection

text: mouse gut metagenome M5_pre_1


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: CDC1551 infected

text: mouse gut metagenome M5_post_102


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: CDC1551 infected

text: mouse gut metagenome M5_post_34


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: CDC1551 infected

text: mouse gut metagenome M4_post_13


text: live

text: Generic

text: control

text: Generic

text: mouse gut metagenome

text: uninfected

text: mouse gut metagenome uninfected_5


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: pre-infection

text: mouse gut metagenome M5_pre_5


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: pre-infection

text: mouse gut metagenome M4_pre_0


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: pre-infection

text: mouse gut metagenome M4_pre_1


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: CDC1551 infected

text: mouse gut metagenome M4_post_6


text: live

text: Generic

text: M. tuberculosis CDC1551

text: Generic

text: mouse gut metagenome

text: CDC1551 infected

text: mouse gut metagenome M4_post_75


Aspergillus flavus SRRC 1357

text: Vanderbilt University

text: live

text: Generic

text: Aspergillus flavus

text: Aspergillus flavus SRRC 1357 RNAseq


Cotton Boll Weevil Transcriptome

text: Brazilian Agricultural Research Corporation

text: live

text: Generic

text: eggs, larvae, adults

characteristic: age

characteristic: collection date

text: Coleoptera, Curculionidae

characteristic: description

text: Anthonomus grandis

text: male and female

characteristic: sex

text: Cotton

characteristic: specific host

text: Agra


Aspergillus flavus SRRC 2112

text: Vanderbilt University

text: live

text: Generic

text: Aspergillus flavus

text: Aspergillus flavus SRRC 2112 RNAseq

characteristic: title


Aspergillus flavus SRRC 2632

text: Vanderbilt University

characteristic: INSDC center name

text: live

text: Generic

text: Aspergillus flavus

text: Aspergillus flavus SRRC 2632 RNAseq


Aspergillus flavus SRRC 2524

text: Vanderbilt University

characteristic: INSDC first public

text: live

text: Generic

text: Aspergillus flavus

text: Aspergillus flavus SRRC 2524 RNAseq


Aspergillus flavus SRRC 2653

text: Vanderbilt University

characteristic: INSDC last update

text: live

text: Generic

text: Aspergillus flavus

text: Aspergillus flavus SRRC 2653 RNAseq


Aspergillus flavus SRRC 2114

text: Vanderbilt University

characteristic: INSDC secondary accession

text: live

text: Generic

text: Aspergillus flavus

text: Aspergillus flavus SRRC 2114


Aspergillus flavus SRRC 1273

text: Vanderbilt University

text: live

characteristic: INSDC status

text: Generic

text: Aspergillus flavus

text: Aspergillus flavus SRRC 1273 RNAseq


Aspergillus flavus NRRL 3357

text: Vanderbilt University

text: live

text: Generic

characteristic: NCBI submission model

text: Aspergillus flavus

text: Aspergillus flavus NRRL 3357


Aspergillus oryzae RIB 333_

text: Vanderbilt University

text: live

text: Generic

characteristic: NCBI submission package

text: Aspergillus oryzae

text: Aspergillus oryzae RIB 333 RNAseq


Aspergillus oryzae RIB 642_

characteristic: External Id

text: Vanderbilt University

text: live

text: Generic

text: Aspergillus oryzae

text: Aspergillus oryzae RIB 642 RNAseq


Aspergillus oryzae RIB 331_

text: Vanderbilt University

text: live

text: Generic

characteristic: SRA accession

text: Aspergillus oryzae

text: Aspergillus oryzae RIB 331


Aspergillus oryzae RIB 302

text: Vanderbilt University

text: live

text: Generic

text: Aspergillus oryzae

characteristic: organism

text: Aspergillus oryzae RIB 302


Aspergillus oryzae RIB 40

text: Vanderbilt University

text: live

text: Generic

text: Aspergillus oryzae

text: Aspergillus oryzae RIB 40


Aspergillus oryzae RIB 632_

text: Vanderbilt University

text: live

text: Generic

text: Aspergillus oryzae

text: Aspergillus oryzae RIB 632


Aspergillus oryzae RIB 949_

text: Vanderbilt University

text: live

text: Generic

text: Aspergillus oryzae

text: Aspergillus oryzae RIB 949


text: University of Nottingham

text: live

text: Generic

characteristic: growth phase

text: Saccharomyces cerevisiae

text: MATa / MATalpha, ctf19Δ::kanMX / ctf19Δ::kanMX, RAD5 / RAD5, BUD4 / BUD4 leu2 / leu2, ura3 / ura3, trp1 / trp1 ade2 / ade2, his3 / his3

characteristic: relevant genotype

text: Genomic DNA from G2 phase cells

characteristic: strain


text: University of Nottingham

text: live

text: Generic

text: S

text: Saccharomyces cerevisiae

text: Genomic DNA from S phase cells


text: University of Nottingham

text: live

text: Generic

text: Saccharomyces cerevisiae

text: MATa, DBF4-9myc::hphNT1, RAD5, BUD4, leu2, ura3, trp1, ade2, his3

text: Genomic DNA from G2 phase cells


text: University of Nottingham

text: live

text: Generic

text: S

text: Saccharomyces cerevisiae

text: Genomic DNA from S phase cells


text: University of Nottingham

text: live

text: Generic

text: Saccharomyces cerevisiae

text: MatA/MATalpha, DBF4-9myc::hphNT1/DBF4-9myc::hphNT1, RAD5/RAD5, BUD4/BUD4, leu2/leu2, ura3/ura3, trp1/trp1, ade2/ade2, his3/his3

text: Genomic DNA from G2 phase cells


text: University of Nottingham

text: live

text: Generic

text: S

text: Saccharomyces cerevisiae

text: Genomic DNA from S phase cells


text: University of Calgary - Sun Center of Excellence for Visual Genomics

text: live

text: Generic

text: Cocculus trilobus


text: Yale University

text: live

text: Generic

text: late spermatocyte

characteristic: cell type

text: mixed C57BL/6 and 129

characteristic: genetic background

text: Miwi+/-

characteristic: genotype

text: Mus musculus

text: Late spermatocyte

text: Miwi+/- late sc rep1


text: Yale University

text: live

text: Generic

text: late spermatocyte

text: mixed C57BL/6 and 129

text: Miwi+/-

text: Mus musculus

text: Late spermatocyte

text: Miwi+/- late sc rep2

characteristic: title


text: Yale University

characteristic: INSDC center name

text: live

text: Generic

text: late spermatocyte

text: mixed C57BL/6 and 129

text: Miwi+/-

text: Mus musculus

text: Late spermatocyte

text: Miwi+/- late sc rep3


text: Yale University

characteristic: INSDC first public

text: live

text: Generic

text: late spermatocyte

text: mixed C57BL/6 and 129

text: Miwi-/-

text: Mus musculus

text: Late spermatocyte

text: Miwi-/- late sc rep1


text: Yale University

characteristic: INSDC last update

text: live

text: Generic

text: late spermatocyte

text: mixed C57BL/6 and 129

text: Miwi-/-

text: Mus musculus

text: Late spermatocyte

text: Miwi-/- late sc rep2


text: Yale University

characteristic: INSDC secondary accession

text: live

text: Generic

text: late spermatocyte

text: mixed C57BL/6 and 129

text: Miwi-/-

text: Mus musculus

text: Late spermatocyte

text: Miwi-/- late sc rep3


1133445350508 S02 S02 Sample

text: J. Craig Venter Institute

text: live

characteristic: INSDC status

text: Generic

text: urine sample

characteristic: description

text: Bacteria

text: Sample from Bacteria


1133445350516 S06 S06 Sample

text: J. Craig Venter Institute

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350520 S08 S08 Sample

characteristic: External Id

text: J. Craig Venter Institute

text: live

text: Generic

characteristic: SRA accession

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350532 S15 S15 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

characteristic: organism

text: Sample from Bacteria


1133445350536 S17 S17 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350510 S03 S03 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350506 S01 S01 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350514 S05 S05 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350518 S07 S07 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350534 S16 S16 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350522 S09 S09 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350524 S10 S10 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350526 S11 S11 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350528 S13 S13 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350530 S14 S14 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350512 S04 S04 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350592 S45 S45 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350558 S28 S28 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350562 S30 S30 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350590 S44 S44 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350560 S29 S29 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350552 S25 S25 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350556 S27 S27 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350564 S31 S31 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350568 S33 S33 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350582 S40 S40 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350586 S42 S42 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350596 S47 S47 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350600 S49 S49 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350542 S20 S20 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350544 S21 S21 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350546 S22 S22 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350548 S23 S23 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350574 S36 S36 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350572 S35 S35 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350580 S39 S39 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350578 S38 S38 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350576 S37 S37 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350602 S50 S50 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350604 S51 S51 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350608 S53 S53 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350606 S52 S52 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350540 S19 S19 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350550 S24 S24 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350554 S26 S26 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350566 S32 S32 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350570 S34 S34 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350584 S41 S41 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350588 S43 S43 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350594 S46 S46 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


1133445350598 S48 S48 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: urine sample

text: Bacteria

text: Sample from Bacteria


text: live

text: Generic

text: Jeffersonia diphylla


text: DOE Joint Genome Institute

text: live

text: Generic

text: Cyanobacterium stanieri PCC 7202

text: Cyanobacterium stanieri PCC 7202

characteristic: sample number

text: PCC 7202

text: Sample from Cyanobacterium stanieri PCC 7202


text: Institute of Toxicology and Genomics, Karlsruhe Institute of Technology

text: live

text: Generic

text: AB

text: wild type

text: Danio rerio

text: Whole zebrafish larvae

text: 3 days post fertilization

characteristic: stage

text: whole larvae

characteristic: tissue

text: CTRL 3dpf


text: live

text: Generic

text: AB

characteristic: genetic background

text: (Tg(fli1ep:GAL4FF)ubs3; Tg(UAS:eGFP-HRASV12)io006

text: Danio rerio

text: Whole zebrafish larvae

text: 3 days post fertilization

text: whole larvae

text: FliRas 3df


text: live

text: Generic

text: AB

text: (Tg(fli1ep:GAL4FF)ubs3; tg(UAS:NICD)kca3

characteristic: genotype

text: Danio rerio

text: Whole zebrafish larvae

text: 3 days post fertilization

text: whole larvae

text: Fli NICD 3df


text: Tamil Nadu Agricultural University

text: live

text: Generic

characteristic: cultivar

text: cassava mosaic disease symptoms stage

characteristic: dev-stage

text: Manihot esculenta

text: hermaphrodite

characteristic: sex

text: Leaf

characteristic: tissue-type

text: MECMDEST Cassava (Manihot esculenta Crantz.) complementary DNA

characteristic: title


text: Clemson University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: flies microinjected with Gram positive, Gram negative bacteria and fungi collected 6h after injection

text: Musca domestica

text: mixed

text: GSU

characteristic: strain

text: whole fly

text: MDEIS: Immune stimulated adult house fly, 6 h post-injection


characteristic: External Id

text: Research Center Borstel

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Serial patient derived isolate. 72 bp reads (paired end) using Illumina technology.

characteristic: description

text: Mycobacterium tuberculosis

text: Mycobacterium tuberculosis PAm5


Brucella melitensis B115 B115

text: Broad Institute

text: live

text: Generic

characteristic: collection date

text: Malta

text: Brucella melitensis B115

characteristic: organism

text: Goat

characteristic: specific host

text: Generic sample from Brucella melitensis B115


Brucella melitensis F15/06-7 F15/06-7

text: Broad Institute

text: live

text: Generic

text: Italy: Sicily

text: Brucella melitensis F15/06-7

text: Homo sapiens

text: Generic sample from Brucella melitensis F15/06-7


name: 1133515260207 Leptospira kirschneri serovar Bulgarica str. Nikolaevo LS454008-PE-IL41-1 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Leptospira kirschneri serovar Bulgarica str. Nikolaevo

text: Nikolaevo

text: Sample from Leptospira kirschneri serovar Bulgarica str. Nikolaevo


text: Translatomics Lab, Institute of Life and Health Engineering, Jinan University

text: live

text: Generic

characteristic: cell line

text: lung cancer

characteristic: cell type

text: Homo sapiens


text: live

text: Generic

text: normal human bronchial epithelial (HBE) cells

text: Homo sapiens

text: HBE

text: HBERNA

characteristic: title


characteristic: INSDC center name

text: live

text: Generic

text: Homo sapiens

text: HBE

text: HBERNC


characteristic: INSDC first public

text: live

text: Generic

text: Berberis aquifolium


E. cuniculi RNA-seq

text: UBC

characteristic: INSDC last update

text: live

text: Generic

text: Encephalitozoon cuniculi ecotype 2 was grown in a rabbit kidney fibroblast cell line (RK13). Infected RK13 cells were collected 24 hours, 48 hours, and 72 hours post-infection. Illumina TruSeq libraries were made for two biological replicates from each time-point. The six libraries were multiplexed and sequenced in two lanes on an Illumina HiSeq.

text: Encephalitozoon cuniculi EC2

text: Encephalitozoon cuniculi ECII transcriptome at three post-infection time-points


text: University of Calgary - Sun Center of Excellence for Visual Genomics

text: live

characteristic: INSDC status

text: Generic

text: Tinospora cordifolia


text: Rolf Ohlsson group, MTC, Karolinska Institutet

text: live

text: Generic

text: Homo sapiens

text: COT1 DNA

characteristic: sample type

text: (15279-011, Invitrogen)

text: COT1 DNA


characteristic: External Id

text: live

text: Generic

text: Homo sapiens

text: CT11 DNA

text: Chromosome territory probe for human chromosome 11

text: CT11 DNA


name: 1133515260209 Leptospira santarosai str. ST188 LS454005-BP3KB-A6NB-1-537 Sample

text: J. Craig Venter Institute

characteristic: INSDC secondary accession

text: live

text: Generic

text: Total DNA isolated from Leptospira santarosai str. ST188

text: Leptospira santarosai str. ST188

characteristic: strain

text: Sample from Leptospira santarosai str. ST188


text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Artemisia maritima


text: live

text: Generic

characteristic: SRA accession

text: Citrus x paradisi


name: 1133602079140 Leptospira santarosai str. ST188 LS454005-PE-IL40-1 Sample

text: J. Craig Venter Institute

text: live

text: Generic

characteristic: description

text: Leptospira santarosai str. ST188


text: live

text: Generic

text: Cannabis sativa

characteristic: organism


text: Developmental Biology, Institute of Life Sciences, Fuzhou University

text: live

text: Generic

text: Gallus gallus

text: Dermal Papilla

text: Dermal Papilla at growth phase

characteristic: stage

text: feather follicle

characteristic: tissue


text: live

text: Generic

text: Gallus gallus

text: Feather epithelium

text: Feather epithelium at growth phase

text: feather follicle

text: Erz


text: live

text: Generic

text: Gallus gallus

text: Mesenchymal pulp

text: Mesenchymal pulp at growth phase

text: feather follicle

text: Pp


text: live

text: Generic

text: Gallus gallus

text: Dermal Papilla

text: Dermal Papilla at resting phase

text: feather follicle


text: live

text: Generic

text: Gallus gallus

text: feather follicle

text: feather follicle at regeneration phase by 2 days after wound

text: feather follicle


text: live

text: Generic

text: Gallus gallus

text: feather follicle

text: feather follicle at regeneration phase by 4 days after wound

text: feather follicle


Catharanthus roseus

text: Medicinal Plant Consortium

text: live

text: Generic

text: Development of transcriptomic resources for interrogating the biosynthesis of monoterpene indole alkaloids in medicinal plant species

text: USA: Massachussetts Institute of Technology, Cambridge, MA

characteristic: geo loc name

text: C. roseus plants were germinated and grown at Massachussetts Institute of Technology in Miracle-Gro potting mix grown at ambient temperature (18-21°C). Full spectrum sunlamps were used at 100-150 microeinsteins with a 14-hour day and 10 hr night.

characteristic: isolation-source

text: cra

characteristic: label

text: Catharanthus roseus

text: tissue sample

characteristic: sample-type

text: leaf, immature leaf, flower, upper stem and entire root

characteristic: tissue-type

text: Catharanthus roseus from Medicinal Plant Genomics Resource


Camptotheca acuminata

text: Medicinal Plant Consortium

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: USA: Michigan State University (MSU, 47.2 latitude, -84.5 longitude), Texas A&M University (TAMU, 30.6 latitude, -96.3 longitude) and the Thad Cochran Natural Products Center in Oxford, Mississippi (34.4 latitude, -89.5 longitude).

text: All plants grown at MSU and TAMU were derived from seed collected from a single C. acuminata tree at the San Antonio Zoo (29.4 latitude, -98.5 longitude). C. acuminata plants grown in MSU growth chambers were cultivated at 100-150 microeinsteins from a combination of fluorescent and incandescent lights with a 14-hour day (21°C) and 10 hr night (18°C). For greenhouse growth at MSU, tissue culture grown plants with 4-8 leaves were transferred to large pots containing a 1:1:1 mixture of Redi-Earth:Perlite:coarse vermiculite and Osmocote (13:13:13) slow release fertilizer. Greenhouse plants were grown under natural light with approximately 200 microeinstein of supplemental light from sodium lamps to maintain a minimum 12 hr day. The temperature was maintained at 30°C during the day and 22°C at night.

text: caa

text: Camptotheca acuminata

text: tissue sample, cell culture

text: seedling leaf, trichome, lower bark, immature leaf, and callus

text: Camptotheca acuminata from Medicinal Plant Genomics Resource

characteristic: title