characteristic: External Id

characteristic: INSDC center name

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: Streptococcus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

characteristic: host body product

text: pneumonia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

characteristic: isolate

text: not determined

characteristic: isolation and growth condition

text: blood

text: blood

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA11426

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: 12 mL

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA11426

value: cefotaxime

value: rifampin

value: vancomycin


status: PUBLIC

characteristic: External Id

text: University of Maryland School of Medicine, Institute for Genome Sciences

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

tag: attribute

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

text: human-associated habitat [ENVO:00009003]

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Maryland

text: not determined

text: blood

text: not determined

text: not determined

text: not determined

text: blood

text: blood

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae 5185-06

characteristic: organism

text: Pneumococcal Multidrug Resistance And Vaccine Escape

text: not determined

text: not determined

text: Emerging Infections Program (CDC)

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae 5185-06

characteristic: title

type: AMR curated data - CABBAGE

value: erythromycin

value: resistant

value: Streptococcus pneumoniae

value: tetracycline

value: susceptible

value: penicillin

value: chloramphenicol


characteristic: External Id

characteristic: INSDC center name

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: Streptococcus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

characteristic: host body product

text: bacteremia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

characteristic: isolate

text: not determined

characteristic: isolation and growth condition

text: blood

text: blood

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA11663

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: 12 mL

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA11663

value: cefuroxime

value: quinupristin-dalfopristin

value: trimethoprim-sulfamethoxazole

value: trovafloxacin

value: meropenem

value: intermediate

value: amoxicillin

value: clindamycin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Georgia

text: not determined

text: blood

text: bacteremia

text: not determined

text: not determined

text: DNeasy

text: not determined

text: Streptococcus pneumoniae GA11856

characteristic: organism

text: not determined

text: 12 mL

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA11856

characteristic: title


characteristic: External Id

characteristic: INSDC center name

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: USA: Georgia

text: not determined

text: blood

characteristic: host body product

text: pneumonia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA13224

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: 12 mL

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA13224


characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

text: not determined

text: not determined

characteristic: isolate

text: not determined

text: blood

text: blood

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA13338

characteristic: organism

text: not determined

text: 12 mL

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA13338

characteristic: title

value: levofloxacin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: USA: Georgia

text: not determined

text: blood

characteristic: host body product

text: bacteremia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA13430

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA13430


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

text: pneumonia

text: not determined

characteristic: isolate

text: not determined

text: blood

text: blood

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA13455

characteristic: organism

text: not determined

text: 12 mL

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA13455

characteristic: title

value: cefotaxime

value: vancomycin

value: rifampin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: Streptococcus

text: USA: Georgia

text: not determined

text: Homo sapiens

text: blood

characteristic: host body product

text: septic arthritis, septic knee

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: blood

text: blood

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA13494

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: 12 mL

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA13494

value: erythromycin

value: resistant

value: Streptococcus pneumoniae


characteristic: External Id

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Georgia

text: not determined

text: blood

text: not determined

text: not determined

text: not determined

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA13499

characteristic: organism

text: not determined

text: 12 mL

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA13499

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

characteristic: host body product

text: bacteremia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

characteristic: isolate

text: not determined

characteristic: isolation and growth condition

text: blood

text: blood

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA13637

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: 12 mL

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA13637

value: susceptible

value: penicillin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: not determined

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

text: not determined

characteristic: finishing strategy (depth of coverage)

text: USA: Georgia

text: not determined

text: blood

text: bacteremia

text: not determined

text: not determined

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA13723

characteristic: organism

text: not determined

text: 12 mL

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA13723

characteristic: title


characteristic: External Id

characteristic: INSDC center name

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: USA: Maryland

text: not determined

text: blood

characteristic: host body product

text: not determined

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae 5652-06

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Emerging Infections Program (CDC)

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae 5652-06


characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

text: bacteremia

text: not determined

characteristic: isolate

text: not determined

text: blood

text: blood

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA13856

characteristic: organism

text: not determined

text: 12 mL

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA13856

characteristic: title

value: chloramphenicol

value: tetracycline

value: cefuroxime


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: USA: Georgia

text: not determined

text: blood

characteristic: host body product

text: pneumonia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA14373

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA14373


characteristic: External Id

text: University of Maryland School of Medicine, Institute for Genome Sciences

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.human-associated

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Georgia

text: not determined

text: blood

text: bacteremia

text: not determined

text: not determined

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA14688

characteristic: organism

text: not determined

text: 12 mL

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA14688

characteristic: title


characteristic: INSDC last update

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: human-associated habitat [ENVO:00009003]

text: blood [ENVO:02000020]

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

characteristic: host body product

text: bacteremia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

characteristic: isolate

text: not determined

characteristic: isolation and growth condition

text: blood

text: blood

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA14798

text: Pneumococcal Multidrug Resistance And Vaccine Escape

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: 12 mL

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA14798

value: quinupristin-dalfopristin

value: trimethoprim-sulfamethoxazole

value: gatifloxacin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

text: blood

text: pneumonia

text: not determined

text: not determined

text: blood

text: blood

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA16121

characteristic: organism

text: not determined

text: 12 mL

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA16121

characteristic: title

value: intermediate

value: amoxicillin


characteristic: External Id

characteristic: INSDC center name

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: Streptococcus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

characteristic: host body product

text: bacteremia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

characteristic: isolate

text: not determined

characteristic: isolation and growth condition

text: blood

text: blood

text: DNeasy

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA16242

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: 12 mL

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA16242

value: levofloxacin

value: meropenem


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

text: blood

text: bacteremia

text: not determined

text: not determined

text: blood

text: blood

text: DNeasy

text: not determined

text: Streptococcus pneumoniae GA16531

characteristic: organism

text: not determined

text: 12 mL

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA16531

characteristic: title

value: linezolid

value: sparfloxacin

value: clindamycin

value: vancomycin

value: ciprofloxacin


characteristic: External Id

characteristic: INSDC center name

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: Streptococcus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

characteristic: host body product

text: pneumonia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

characteristic: isolate

text: not determined

characteristic: isolation and growth condition

text: blood

text: blood

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA16833

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: 12 mL

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA16833

value: rifampin

value: Streptococcus pneumoniae

value: susceptible

value: erythromycin

value: resistant

value: cefotaxime


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

text: blood

text: pneumonia

text: not determined

text: not determined

text: blood

text: blood

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA17227

characteristic: organism

text: not determined

text: 12 mL

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA17227

characteristic: title

value: trimethoprim-sulfamethoxazole

value: tetracycline

value: quinupristin-dalfopristin

value: cefuroxime

value: chloramphenicol

value: penicillin


characteristic: External Id

characteristic: INSDC center name

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: USA: Georgia

text: not determined

text: blood

characteristic: host body product

text: pneumonia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: DNeasy

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA17301

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA17301


characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: New York

text: not determined

text: blood

text: not determined

text: not determined

characteristic: isolate

text: not determined

text: blood

text: blood

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae 5787-06

characteristic: organism

text: not determined

text: not determined

text: Emerging Infections Program (CDC)

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae 5787-06

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: Streptococcus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

characteristic: host body product

text: not determined

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: blood

text: blood

text: DNeasy

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA17328

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: 12 mL

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA17328

value: meropenem

value: gatifloxacin

value: levofloxacin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: pleural effusion [ENVO:02000033]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

text: pleural fluid

text: pneumonia

text: not determined

characteristic: isolate

text: not determined

text: PE

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA17371

characteristic: organism

text: not determined

text: 12 mL

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA17371

characteristic: title

value: amoxicillin

value: clindamycin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: USA: Georgia

text: not determined

text: blood

characteristic: host body product

text: pneumonia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA17457

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA17457


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.human-associated

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Georgia

text: not determined

text: blood

text: pneumonia

text: not determined

text: not determined

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA17484

characteristic: organism

text: not determined

text: not determined

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA17484

characteristic: title


characteristic: INSDC first public

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: cerebrospinal fluid [ENVO:02000029]

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: cerebrospinal fluid

characteristic: host body product

text: meningitis

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

characteristic: isolate

text: not determined

characteristic: isolation and growth condition

text: blood; CSF

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA17545

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: 10-12 mL

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA17545

value: rifampin

value: vancomycin

value: intermediate


characteristic: External Id

text: University of Maryland School of Medicine, Institute for Genome Sciences

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

text: blood

text: pneumonia

text: not determined

text: not determined

text: blood

text: blood

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA17570

characteristic: organism

text: not determined

text: 10-12 mL

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA17570

characteristic: title

value: susceptible

value: Streptococcus pneumoniae

value: erythromycin


characteristic: External Id

characteristic: INSDC center name

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

text: human-associated habitat [ENVO:00009003]

text: blood [ENVO:02000020]

text: USA: Georgia

text: not determined

text: blood

characteristic: host body product

text: pneumonia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: DNeasy

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA17719

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA17719


characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

text: bacteremia

text: not determined

characteristic: isolate

text: not determined

text: blood

text: blood

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA17971

characteristic: organism

text: Pneumococcal Multidrug Resistance And Vaccine Escape

text: not determined

text: 12 mL

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA17971

characteristic: title

value: cefotaxime

value: sparfloxacin

value: linezolid

value: trimethoprim-sulfamethoxazole


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: USA: Georgia

text: not determined

text: blood

characteristic: host body product

text: bacteremia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA18068

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA18068


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

text: bacteremia

text: not determined

characteristic: isolate

text: not determined

text: blood

text: blood

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA18523

characteristic: organism

text: not determined

text: 12 mL

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA18523

characteristic: title

value: tetracycline

value: resistant

value: quinupristin-dalfopristin

value: cefuroxime

value: chloramphenicol


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: pleural effusion [ENVO:02000033]

text: Streptococcus

text: USA: California

text: not determined

text: pleural fluid

characteristic: host body product

text: not determined

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: PE

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae 6735-05

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Emerging Infections Program (CDC)

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae 6735-05

value: penicillin


characteristic: External Id

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

text: pneumonia

text: not determined

characteristic: isolate

text: not determined

text: blood

text: blood

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA19077

characteristic: organism

text: not determined

text: 12 mL

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA19077

characteristic: title

value: amoxicillin

value: levofloxacin

value: meropenem

value: clindamycin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: USA: Georgia

text: not determined

text: blood

characteristic: host body product

text: pneumonia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA19101

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA19101


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

text: cellulitis

text: not determined

characteristic: isolate

text: not determined

text: blood

text: blood

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA19451

characteristic: organism

text: not determined

text: not determined

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA19451

characteristic: title

value: susceptible

value: vancomycin

value: ciprofloxacin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: Streptococcus

text: USA: Georgia

text: not determined

text: Homo sapiens

text: blood

characteristic: host body product

text: pneumonia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: blood

text: blood

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA19690

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA19690

value: Streptococcus pneumoniae

value: erythromycin

value: telithromycin

value: ceftriaxone

value: rifampin


characteristic: External Id

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Georgia

text: not determined

text: blood

text: pneumonia

text: not determined

text: not determined

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA19923

characteristic: organism

text: not determined

text: not determined

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA19923

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: USA: Georgia

text: not determined

text: blood

characteristic: host body product

text: pneumonia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA19998

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA19998


characteristic: External Id

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Georgia

text: not determined

text: blood

text: pneumonia

text: not determined

text: not determined

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA40028

characteristic: organism

text: not determined

text: not determined

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA40028

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: USA: Georgia

text: not determined

text: blood

characteristic: host body product

text: pneumonia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA40183

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: 12 mL

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA40183


characteristic: External Id

text: University of Maryland School of Medicine, Institute for Genome Sciences

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Georgia

text: not determined

text: blood

text: pneumonia

text: not determined

text: not determined

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA40410

characteristic: organism

text: not determined

text: 12 mL

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA40410

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

text: terrestrial biome [ENVO:00000446]

text: human-associated habitat [ENVO:00009003]

text: blood [ENVO:02000020]

text: USA: Georgia

text: not determined

text: blood

characteristic: host body product

text: pneumonia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA40563

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA40563


characteristic: External Id

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Connecticut

text: not determined

text: blood

text: not determined

text: not determined

characteristic: isolate

text: not determined

text: blood

text: blood

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae 6901-05

characteristic: organism

text: Pneumococcal Multidrug Resistance And Vaccine Escape

text: not determined

text: not determined

text: Emerging Infections Program (CDC)

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae 6901-05

characteristic: title

value: cefotaxime

value: intermediate

value: tetracycline


characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: Streptococcus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

characteristic: host body product

text: pneumonia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: blood

text: blood

text: DNeasy

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA41277

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: 12 mL

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA41277

value: cefuroxime

value: chloramphenicol

value: resistant


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: cerebrospinal fluid [ENVO:02000029]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

text: cerebrospinal fluid

text: meningitis

text: not determined

characteristic: isolate

text: not determined

text: CSF

text: central nervous system

text: DNeasy

text: not determined

text: Streptococcus pneumoniae GA41301

characteristic: organism

text: not determined

text: 10-12 mL

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA41301

characteristic: title

value: quinupristin-dalfopristin

value: levofloxacin

value: trimethoprim-sulfamethoxazole


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: Streptococcus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

characteristic: host body product

text: meningitis

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: blood

text: blood

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA41317

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: 10-12 mL

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA41317

value: amoxicillin

value: susceptible

value: meropenem

value: linezolid


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

text: blood

text: pneumonia

text: not determined

characteristic: isolate

text: not determined

text: blood

text: blood

text: DNeasy

text: not determined

text: Streptococcus pneumoniae GA41410

characteristic: organism

text: not determined

text: 12 mL

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA41410

characteristic: title

value: clindamycin

value: Streptococcus pneumoniae

value: vancomycin

value: erythromycin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: Streptococcus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

characteristic: host body product

text: pneumonia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: blood

text: blood

text: DNeasy

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA41437

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: 12 mL

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA41437

value: cefotaxime

value: ceftriaxone

value: telithromycin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

text: blood

text: pneumonia

text: not determined

characteristic: isolate

text: not determined

text: blood

text: blood

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA41538

characteristic: organism

text: not determined

text: 12 mL

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA41538

characteristic: title

value: rifampin

value: tetracycline

value: intermediate

value: penicillin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: Streptococcus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

characteristic: host body product

text: pneumonia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: blood

text: blood

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA41565

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA41565

value: levofloxacin

value: quinupristin-dalfopristin

value: cefuroxime

value: resistant

value: ciprofloxacin

value: chloramphenicol


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

text: blood

text: pneumonia

text: not determined

characteristic: isolate

text: not determined

text: blood

text: blood

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA41688

characteristic: organism

text: not determined

text: not determined

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA41688

characteristic: title

value: meropenem

value: amoxicillin

value: susceptible

value: linezolid

value: clindamycin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: USA: Georgia

text: not determined

text: blood

characteristic: host body product

text: bacteremia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

text: not determined

characteristic: isolation and growth condition

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA43257

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA43257


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.human-associated

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Georgia

text: not determined

text: blood

text: pneumonia

text: not determined

text: not determined

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA43264

characteristic: organism

text: not determined

text: 12 mL

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA43264

characteristic: title


characteristic: INSDC last update

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: Streptococcus

characteristic: genus

text: USA: Minnesota

text: not determined

text: blood

characteristic: host body product

text: not determined

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

characteristic: isolate

text: not determined

characteristic: isolation and growth condition

text: blood

text: blood

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae 6963-05

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Emerging Infections Program (CDC)

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae 6963-05

value: Streptococcus pneumoniae


characteristic: External Id

text: University of Maryland School of Medicine, Institute for Genome Sciences

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

text: pneumonia

text: not determined

text: not determined

text: blood

text: blood

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA43265

characteristic: organism

text: not determined

text: not determined

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA43265

characteristic: title

value: erythromycin

value: trimethoprim-sulfamethoxazole

value: vancomycin

value: telithromycin


characteristic: External Id

characteristic: INSDC center name

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: human-associated habitat [ENVO:00009003]

text: blood [ENVO:02000020]

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

text: blood

characteristic: host body product

text: pneumonia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

characteristic: isolate

text: not determined

characteristic: isolation and growth condition

text: blood

text: blood

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA43380

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA43380

value: rifampin

value: tetracycline

value: penicillin


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Georgia

text: not determined

text: blood

text: pneumonia

text: not determined

text: not determined

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA44128

characteristic: organism

text: Pneumococcal Multidrug Resistance And Vaccine Escape

text: not determined

text: not determined

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA44128

characteristic: title


characteristic: External Id

characteristic: INSDC center name

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

characteristic: host body product

text: bacteremia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

characteristic: isolate

text: not determined

characteristic: isolation and growth condition

text: blood

text: blood

text: DNeasy

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA44194

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA44194

value: quinupristin-dalfopristin

value: intermediate

value: cefuroxime

value: ceftriaxone


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: cerebrospinal fluid [ENVO:02000029]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

text: cerebrospinal fluid

text: meningitis

text: not determined

text: not determined

text: CSF

text: central nervous system

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA44288

characteristic: organism

text: not determined

text: 12 mL

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA44288

characteristic: title

value: resistant

value: chloramphenicol

value: levofloxacin

value: meropenem


characteristic: External Id

characteristic: INSDC center name

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: Streptococcus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

characteristic: host body product

text: pneumonia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

characteristic: isolate

text: not determined

characteristic: isolation and growth condition

text: blood

text: blood

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA44378

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA44378

value: susceptible

value: amoxicillin

value: linezolid


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: env package

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: USA: Georgia

text: not determined

text: blood

text: pneumonia

text: not determined

text: not determined

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA44386

characteristic: organism

text: not determined

text: not determined

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA44386

characteristic: title


characteristic: External Id

characteristic: INSDC center name

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

characteristic: host body product

text: pneumonia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

characteristic: isolate

text: not determined

characteristic: isolation and growth condition

text: blood

text: blood

text: DNeasy

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA44452

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA44452

value: Streptococcus pneumoniae

value: cefotaxime

value: clindamycin

value: trimethoprim-sulfamethoxazole


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Celera Assembler, Version 6.1

characteristic: assembly

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: terrestrial biome [ENVO:00000446]

characteristic: environment (biome)

characteristic: environment (feature)

text: blood [ENVO:02000020]

characteristic: environment (material)

characteristic: finishing strategy (depth of coverage)

text: Streptococcus

characteristic: genus

text: USA: Georgia

text: not determined

text: Homo sapiens

text: blood

text: bacteremia

text: not determined

text: not determined

text: blood

text: blood

text: Genomic Tip

text: not determined

text: Streptococcus pneumoniae GA44500

characteristic: organism

text: not determined

text: 12 mL

text: Georgia Emerging Infections Program

text: Homo sapiens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA44500

characteristic: title

value: telithromycin

value: tetracycline

value: erythromycin


characteristic: External Id

characteristic: INSDC center name

text: live

text: USA

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Celera Assembler, Version 6.1

text: Keywords: GSC:MIxS;MIGS:5.0

text: terrestrial biome [ENVO:00000446]

text: blood [ENVO:02000020]

text: Streptococcus

text: USA: Georgia

text: not determined

text: Homo sapiens

characteristic: host

text: blood

characteristic: host body product

text: pneumonia

characteristic: host disease

characteristic: host taxid

text: not determined

characteristic: investigation type

characteristic: isolate

text: not determined

characteristic: isolation and growth condition

text: blood

text: blood

text: Genomic Tip

characteristic: nucleic acid extraction

text: not determined

characteristic: number of replicons

text: Streptococcus pneumoniae GA44511

characteristic: project name

text: not determined

characteristic: reference for biomaterial

text: not determined

characteristic: sample size

characteristic: sequencing method

characteristic: serotype

text: Georgia Emerging Infections Program

characteristic: source material identifiers

text: Homo sapiens

characteristic: specific host

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus pneumoniae GA44511

value: rifampin

value: vancomycin

value: penicillin


characteristic: External Id

text: Academic Centre for Dentistry Amsterdam

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Saliva sample, barcode sequence TACTGAGCTA

characteristic: description

text: Bacteria

characteristic: organism

text: Saliva

characteristic: title


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence AGTATACATA

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence CGACGTGACT

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence CATAGTAGTG

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence CGAGAGATAC

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence ACAGTCGTGC

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence ATACGACGTA

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence TCACGTACTA

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence AGTCGAGAGA

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence TACACACACT

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence ATATAGTCGC

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: saliva sample, barcode sequence CGTCTAGTAC

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence TCTACGTAGC

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence ACATGACGAC

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence ACGTCTCATC

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence ATCTACTGAC

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence TACACGTGAT

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence TACAGATCGT

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence TACGCTGTCT

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence ACGACAGCTC

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence CACGTAGATC

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence TAGTGTAGAT

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence TCGATCACGT

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence TCGCACTAGT

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence TCTAGCGACT

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence CACGTGTCGC

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence TCTATACTAT

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence TAGTCGCATA

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence TGACGTATGT

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence TGTGAGTAGT

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence ACTCATCTAC

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence ACTCGCGCAC

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence TATATATACA

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence ACGAGTGCGT

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence TACGAGTATG

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence AGTGCTACGA

text: Bacteria

text: Saliva


text: Academic Centre for Dentistry Amsterdam

text: live

text: Generic

text: Saliva sample, barcode sequence TACTCTCGTG

text: Bacteria

text: Saliva


Axinella sponge metagenome

text: Resphera Biosciences

text: live

text: Generic

text: symbiont metagenome

text: Bacterial symbionts within Axinella corrugata sponges and associated environment


text: SRA

text: FAIRE ethanol

text: live

text: Generic

text: FAIRE ethanol

text: A1-2 cells treated with ethanol for 1 hour were subject to FAIRE and enriched DNA sequenced.

text: Homo sapiens

text: A1-2 FAIRE ethanol treated


Pachycladon enysii chloroplast

text: Massey University

text: live

text: Generic

text: Pachycladon enysii

text: Pachycladon enysii chloroplast sequencing


Sea cucumber-2

text: liaoning ocean and fisheries science research institute

text: live

text: Generic

text: Pooled sample of 15 Apostichopus japonicus coelomocytes which were injected with 500ul LPS (1g/L) four hours before collection.

text: Apostichopus japonicus

text: Transcriptome Sequencing and analysis of immune-related genes of sea cucumber


Sea cucumber-3

text: live

text: Generic

text: Pooled sample of 15 Apostichopus japonicus coelomocytes which were injected with 500ul LPS (1g/L) twenty four hours before collection.

text: Apostichopus japonicus


Sea cucumber-4

text: live

text: Generic

text: Pooled sample of 15 Apostichopus japonicus coelomocytes which were injected with 500ul LPS (1g/L) seventy two before collection.

text: Apostichopus japonicus


Sea cucumber-5

text: live

text: Generic

text: Pooled sample of Apostichopus japonicus tissues and samples from every development stages. Tissues include body wall, intestine, respiratory trees, coelomocytes, male and female gonad, Samples from every development stages include unfertilized eggs, fertilized eggs, cellulous stages, blastula prior to hatching, gastrula, early auricularia, auricularia, late auricularia, doliolaria, pentactula and 1-mm long juvenile.

text: Apostichopus japonicus


text: Dr. Sheng Zhong, Bioengineering, University of California San Diego

text: live

text: Generic

text: mouse embryonic stem cells (E14)

characteristic: cell type

characteristic: chip

text: Mus musculus

text: mouse embryonic stem cells (E14)


text: live

text: Generic

text: mouse embryonic stem cells (E14)

text: IgG

text: Mus musculus

text: mouse embryonic stem cells (E14)


text: live

text: Generic

text: mouse embryonic stem cells (E14)

text: Mus musculus

text: mouse embryonic stem cells (E14)


text: live

text: Generic

text: mESC E14 under Activin A differentiation, day 4

text: Mus musculus


text: live

text: Generic

text: Mus musculus


text: live

text: Generic

text: mESC E14 under Activin A differentiation, day 6

text: Mus musculus


text: live

text: Generic

text: Mus musculus


text: live

text: Generic

text: pig induced pluripotent stem cells

text: Sus scrofa

text: pig induced pluripotent stem cells


text: live

text: Generic

text: pig induced pluripotent stem cells

text: NANOG

text: Sus scrofa

text: pig induced pluripotent stem cells


text: live

text: Generic

text: pig induced pluripotent stem cells

text: IgG

text: Sus scrofa

text: pig induced pluripotent stem cells


text: live

text: Generic

text: pig induced pluripotent stem cells

text: Sus scrofa

text: pig induced pluripotent stem cells


text: live

text: Generic

text: human embryonic stem cell (H1)

text: Homo sapiens

text: human embryonic stem cell (H1)


name: Metagenomes of lignocellulolytic microbial communities

text: National Center of Genetic Engineering and Biotechnology (BIOTEC)

text: live

text: Generic

text: The metagenomic samples were prepared from: (i) Native microflora in an industrial sugarcane bagasse collection site at Phu Kheio Bio-Energy factory, Chaiyapoom, Thailand. Six samples (BG_env1-BG_env6) were collected from different regions in the bagasse pile with different microenvironmental conditions. (2) Native microflora in cow rumen fluid. Three samples (CR_env1-CR_env3) were collected from three groups of cows fed with different diet. (3) Native microflora in activated sludge from a pulp mill in Ratchaburi, Thailand (AS_env1) (4) Structurally stable lignocellulose degrading microbial consottia constructed from the above samples using successive subcultivation method in PCS medium containing alkali-pretreated rice straw as a carbon source. Three stable consortia were obtained (BG_stable MC/ CR_stable MC/ AS_stable MC) from pool samples of BG_env, CR_env, and AS_env1.

text: metagenomes

text: Tagged 16S rRNA gene pyrosequencing analysis of lignocellulolytic microbial communities


barley miRNA

text: Northwest A&F University

text: live

text: Generic

text: Hordeum vulgare

text: Barley miRNA identification


text: Capital Normal University

text: live

text: Generic

text: Physcomitrium patens

text: P. patens protoplast cultures at 0 hours

text: protoplast

characteristic: tissue

text: Protoplast reprogramming_0h


text: Capital Normal University

text: live

text: Generic

text: Physcomitrium patens

text: P. patens protoplast cultures at 24 hours

text: protoplast

text: Protoplast reprogramming_24h