text: live

text: Generic

text: anti-Brf1/2 antibody

characteristic: antibody

text: Cell Signaling Technologies

characteristic: antibody manufacturer

text: E14 mESCs

text: wt

text: Mus musculus

text: Brf1 and Brf2 immunoprecipitated complexes

text: E14 mESCs

text: Sample immunoprecipitate 1


status: PUBLIC

characteristic: External Id

text: Michael Elowitz, Biology and Applied Physics, California Institute of Technology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: anti-Brf1/2 antibody

tag: attribute

text: Cell Signaling Technologies

text: E14 mESCs

characteristic: cell type

characteristic: genetic background

text: wt

characteristic: genotype

text: Mus musculus

characteristic: organism

characteristic: sample type

text: E14 mESCs

text: Sample immunoprecipitate 2

characteristic: title


text: live

text: Generic

text: rabbit IgG

characteristic: antibody

text: E14 mESCs

text: wt

text: Mus musculus

text: control

text: E14 mESCs

text: Control IgG 1


text: live

text: Generic

text: rabbit IgG

text: E14 mESCs

text: wt

text: Mus musculus

text: control

text: E14 mESCs

text: Control IgG 2


text: National center of plant gene research (Wu han)

text: live

text: Generic

text: 11 days seedling

text: H3K9ac (Millipore, 07-325, lot DAM1813175)

characteristic: chip antibody

characteristic: line

text: Oryza sativa

text: seedling


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: 11 days seedling

text: Oryza sativa

text: seedling


text: van Steensel group, division of Molecular Biology, Netherlands Cancer Institute

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: cell line

characteristic: clone

text: Homo sapiens

text: Doxycycline +/ Shield -

characteristic: treatment protocol


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Homo sapiens

text: Doxycycline -/ Shield -


text: live

text: Generic

text: Homo sapiens

characteristic: organism

text: Doxycycline -/ Shield +


text: Udine University, Italy

text: live

text: Generic

text: Catharanthus roseus

text: periwinkle

characteristic: title


text: European Molecular Biology Laboratory

text: live

text: Generic

text: YPAD media

characteristic: media

text: Saccharomyces cerevisiae

characteristic: protocol

text: AAGCTA(T)

characteristic: reverse side barcode

text: mid-log phase cells, OD 1

text: SLS045 (diploid, S288c background)

characteristic: strain


characteristic: External Id

text: European Molecular Biology Laboratory

characteristic: INSDC center name

text: live

text: Generic

text: YPAD media

text: Saccharomyces cerevisiae

text: CGTGAT(T)

text: mid-log phase cells, OD 1

text: SLS045 (diploid, S288c background)


text: European Molecular Biology Laboratory

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: YPAD media

text: Saccharomyces cerevisiae

text: GTAGCC(T)

text: mid-log phase cells, OD 1

text: SLS045 (diploid, S288c background)


text: European Molecular Biology Laboratory

text: live

text: Generic

text: YPGal media

text: Saccharomyces cerevisiae

text: ACATCG(T)

text: mid-log phase cells, OD 1

text: SLS045 (diploid, S288c background)


text: European Molecular Biology Laboratory

text: live

text: Generic

text: YPGal media

text: Saccharomyces cerevisiae

text: GCCTAA(T)

text: mid-log phase cells, OD 1

text: SLS045 (diploid, S288c background)


text: European Molecular Biology Laboratory

text: live

text: Generic

text: YPGal media

text: Saccharomyces cerevisiae

text: TACAAG(T)

text: mid-log phase cells, OD 1

text: SLS045 (diploid, S288c background)


text: European Molecular Biology Laboratory

text: live

text: Generic

text: AAGCTA(T)

characteristic: forward side barcode

text: YPAD media

text: Saccharomyces cerevisiae

text: bpmI

text: mid-log phase cells, OD 1

text: SLS045 (diploid, S288c background)


text: European Molecular Biology Laboratory

text: live

text: Generic

text: CGTGAT(T)

text: YPAD media

text: Saccharomyces cerevisiae

text: bpmI

text: mid-log phase cells, OD 1

text: SLS045 (diploid, S288c background)


text: European Molecular Biology Laboratory

text: live

text: Generic

text: GTAGCC(T)

text: YPAD media

text: Saccharomyces cerevisiae

text: bpmI

text: mid-log phase cells, OD 1

text: SLS045 (diploid, S288c background)


text: European Molecular Biology Laboratory

text: live

text: Generic

text: AAGCTA(T)

text: YPGal media

text: Saccharomyces cerevisiae

text: bpmI

text: mid-log phase cells, OD 1

text: SLS045 (diploid, S288c background)


text: European Molecular Biology Laboratory

text: live

text: Generic

text: CGTGAT(T)

text: YPGal media

text: Saccharomyces cerevisiae

text: bpmI

text: mid-log phase cells, OD 1

text: SLS045 (diploid, S288c background)


text: European Molecular Biology Laboratory

text: live

text: Generic

text: GTAGCC(T)

text: YPGal media

text: Saccharomyces cerevisiae

text: bpmI

text: mid-log phase cells, OD 1

text: SLS045 (diploid, S288c background)


text: European Molecular Biology Laboratory

text: live

text: Generic

text: ACATCG(T)

text: YPAD media

text: Saccharomyces cerevisiae

text: internal

text: mid-log phase cells, OD 1

text: SLS045 (diploid, S288c background)


text: European Molecular Biology Laboratory

text: live

text: Generic

text: GCCTAA(T)

text: YPAD media

text: Saccharomyces cerevisiae

text: internal

text: mid-log phase cells, OD 1

text: SLS045 (diploid, S288c background)


text: European Molecular Biology Laboratory

text: live

text: Generic

text: TACAAG(T)

text: YPAD media

text: Saccharomyces cerevisiae

text: internal

text: mid-log phase cells, OD 1

text: SLS045 (diploid, S288c background)


text: European Molecular Biology Laboratory

text: live

text: Generic

text: ACATCG(T)

text: YPGal media

text: Saccharomyces cerevisiae

text: internal

text: mid-log phase cells, OD 1

text: SLS045 (diploid, S288c background)


text: European Molecular Biology Laboratory

text: live

text: Generic

text: GCCTAA(T)

text: YPGal media

text: Saccharomyces cerevisiae

text: internal

text: mid-log phase cells, OD 1

text: SLS045 (diploid, S288c background)


text: European Molecular Biology Laboratory

text: live

text: Generic

text: TACAAG(T)

text: YPGal media

text: Saccharomyces cerevisiae

text: internal

text: mid-log phase cells, OD 1

text: SLS045 (diploid, S288c background)


text: European Molecular Biology Laboratory

text: live

text: Generic

text: ATAGAT(T)

text: YPAD media

text: Saccharomyces cerevisiae

text: rnaseq

text: ATAGAT(T)

text: mid-log phase cells, OD 1

text: SLS045 (diploid, S288c background)


text: European Molecular Biology Laboratory

text: live

text: Generic

text: GAATGA(T)

text: YPAD media

text: Saccharomyces cerevisiae

text: rnaseq

text: GAATGA(T)

text: mid-log phase cells, OD 1

text: SLS045 (diploid, S288c background)


text: European Molecular Biology Laboratory

text: live

text: Generic

text: TCCGTC(T)

text: YPAD media

text: Saccharomyces cerevisiae

text: rnaseq

text: TCCGTC(T)

text: mid-log phase cells, OD 1

text: SLS045 (diploid, S288c background)


text: European Molecular Biology Laboratory

text: live

text: Generic

text: ATAGAT(T)

text: YPGal media

text: Saccharomyces cerevisiae

text: rnaseq

text: ATAGAT(T)

text: mid-log phase cells, OD 1

text: SLS045 (diploid, S288c background)


text: European Molecular Biology Laboratory

text: live

text: Generic

text: GAATGA(T)

text: YPGal media

text: Saccharomyces cerevisiae

text: rnaseq

text: GAATGA(T)

text: mid-log phase cells, OD 1

text: SLS045 (diploid, S288c background)


text: European Molecular Biology Laboratory

text: live

text: Generic

text: TCCGTC(T)

text: YPGal media

text: Saccharomyces cerevisiae

text: rnaseq

text: TCCGTC(T)

text: mid-log phase cells, OD 1

text: SLS045 (diploid, S288c background)


text: European Molecular Biology Laboratory

text: live

text: Generic

text: AGCGCT(T)

text: YPAD media

text: Saccharomyces cerevisiae

text: yoon

text: AGCGCT(T)

text: mid-log phase cells, OD 1

text: SLS045 (diploid, S288c background)


text: European Molecular Biology Laboratory

text: live

text: Generic

text: CGAAAC(T)

text: YPAD media

text: Saccharomyces cerevisiae

text: yoon

text: CGAAAC(T)

text: mid-log phase cells, OD 1

text: SLS045 (diploid, S288c background)


text: European Molecular Biology Laboratory

text: live

text: Generic

text: GTATAG(T)

text: YPAD media

text: Saccharomyces cerevisiae

text: yoon

text: GTATAG(T)

text: mid-log phase cells, OD 1

text: SLS045 (diploid, S288c background)


text: European Molecular Biology Laboratory

text: live

text: Generic

text: AGCGCT(T)

text: YPGal media

text: Saccharomyces cerevisiae

text: yoon

text: AGCGCT(T)

text: mid-log phase cells, OD 1

text: SLS045 (diploid, S288c background)


text: European Molecular Biology Laboratory

text: live

text: Generic

text: CGAAAC(T)

text: YPGal media

text: Saccharomyces cerevisiae

text: yoon

text: CGAAAC(T)

text: mid-log phase cells, OD 1

text: SLS045 (diploid, S288c background)


text: European Molecular Biology Laboratory

text: live

text: Generic

text: GTATAG(T)

text: YPGal media

text: Saccharomyces cerevisiae

text: yoon

text: GTATAG(T)

text: mid-log phase cells, OD 1

text: SLS045 (diploid, S288c background)


text: Biological Chemistry, UCLA

text: live

text: Generic

text: 25mM sodium bicarbonate

characteristic: agent

text: H4K16ac active motif (39167)

characteristic: antibody

text: HeLa

characteristic: cell line

text: Homo sapiens

text: H4K16ac 25mM sodium bicarbonate

text: H4K16ac 25mM sodium bicarbonate


text: Biological Chemistry, UCLA

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: 3mM sodium bicarbonate

text: H4K16ac active motif (39167)

text: HeLa

text: Homo sapiens

text: H4K16ac 3mM sodium bicarbonate

text: H4K16ac 3mM sodium bicarbonate


text: Biological Chemistry, UCLA

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: 25mM sodium bicarbonate

text: HeLa

text: Homo sapiens

characteristic: organism

text: WCE 25mM sodium bicarbonate

text: WCE 25mM sodium bicarbonate


text: Biological Chemistry, UCLA

text: live

text: Generic

text: 3mM sodium bicarbonate

text: HeLa

text: Homo sapiens

text: WCE 3mM sodium bicarbonate

text: WCE 3mM sodium bicarbonate

characteristic: title


text: Biological Chemistry, UCLA

text: live

text: Generic

text: 25mM sodium bicarbonate

text: HeLa

text: Homo sapiens

text: mRNA 25mM sodium bicarbonate

text: mRNA 25mM sodium bicarbonate


text: Biological Chemistry, UCLA

text: live

text: Generic

text: 3mM sodium bicarbonate

text: HeLa

text: Homo sapiens

text: mRNA 3mM sodium bicarbonate

text: mRNA 3mM sodium bicarbonate


text: IFOM-IEO

text: live

text: Generic

text: Abcam/No 1791/GR50122-1

characteristic: antibody vendor/catalog/lot

characteristic: chip antibody

text: Mus musculus

text: E14 ES cells


characteristic: External Id

text: IFOM-IEO

text: live

text: Generic

text: Cell Signaling/No 9728S/Lot 1

text: Mus musculus

text: E14 ES cells

characteristic: strain


text: IFOM-IEO

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Cell Signaling/No 07-448/Lot 24439

text: Mus musculus

text: E14 ES cells


text: IFOM-IEO

characteristic: INSDC last update

text: live

text: Generic

text: Abcam/No 1791/GR50122-1

text: Mus musculus

text: E36 ES cells


T. atroviride response to injury

text: LANGEBIO

text: live

text: Generic

text: Transcriptome of Trichoderma atroviride wild type strain in response to 15, 30, 60, 120 and 360 minutes after mechanical damage.

characteristic: description

text: Trichoderma atroviride IMI 206040

text: Trichoderma atroviride wild type strain response to injury


noxR- mutant response to injury

text: LANGEBIO

text: live

text: Generic

text: Transcriptome of Trichoderma atroviride noxR- mutant strain in response to 60, 120 and 360 minutes after mechanical damage

text: Trichoderma atroviride IMI 206040

text: Trichoderma atroviride noxR- mutant strain in response to injury


Timothy grass pollen extract mRNA

text: La Jolla Institute for Allergy and Immunology

text: live

text: Generic

text: Phleum pratense

text: Timothy grass pollen extract mRNA


wtsiRNAs

text: Yale School of Public Health

text: live

text: Generic

text: Illumina sequencing of siRNAs associated with Argonaute 1 in wild-type procyclic T. brucei YTat 1.1.

text: Trypanosoma brucei rhodesiense

text: T. brucei wt siRNAs


dcl1ko siRNAs

text: Yale School of Public Health

text: live

text: Generic

text: Illumina sequencing of siRNAs associated with Argonaute 1 in dcl1 KO procyclic T. brucei YTat 1.1.

text: Trypanosoma brucei rhodesiense

text: T. brucei dcl1ko siRNAs


dcl2ko siRNAs

text: Yale School of Public Health

text: live

text: Generic

text: Illumina sequencing of siRNAs associated with Argonaute 1 in dcl2 KO procyclic T. brucei YTat 1.1.

text: Trypanosoma brucei rhodesiense

text: T. brucei dcl2ko siRNAs


text: Utah State University

text: live

text: Generic

characteristic: isolate

text: Populus tremuloides

text: leaf

characteristic: tissue-type

text: General Sample for Populus tremuloides


Healthy Periwinkle

text: Università di Udine

text: live

text: Generic

text: not infected control

characteristic: health-state

text: greenhouse maintained

characteristic: isolation-source

text: Healthy

characteristic: label

text: Catharanthus roseus

text: leaf midribs

text: Healthy Catharanthus roseus


text: Max Planck Institute for Developmental Biology

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: USA: California

characteristic: geo loc name

text: PS312 and others

text: Pristionchus pacificus

text: Pristionchus pacificus backbone and other strains


text: Cancer Research UK Cambridge Institute

text: live

text: Generic

characteristic: SRA accession

characteristic: cell line

text: breast cancer cells

characteristic: cell type

text: anti-ERa

characteristic: chip antibody

text: Santa Cruz

characteristic: chip antibody vendor

text: negative control

characteristic: genotype/variation

text: Homo sapiens

characteristic: organism

text: E2 at final conc. 100nM for 3 hrs

characteristic: stimulated with

characteristic: title

text: AllStars Negative Control siRNA (Cat nr:1027281, Qiagen)

characteristic: tranfected with


characteristic: External Id

text: Cancer Research UK Cambridge Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: breast cancer cells

text: anti-ERa

text: Santa Cruz

text: GATA knockdown

text: Homo sapiens

text: E2 at final conc. 100nM for 3 hrs

text: ON-TARGET plus siRNA J-0033781-09, siGATA3-Custom-1, siGATA3-Custom-2


text: Cancer Research UK Cambridge Institute

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: breast cancer cells

text: Abcam

text: negative control

text: Homo sapiens

text: Vehicle


text: Cancer Research UK Cambridge Institute

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: breast cancer cells

text: Abcam

text: GATA knockdown

text: Homo sapiens

text: Vehicle


text: Cancer Research UK Cambridge Institute

text: live

text: Generic

characteristic: cell line

text: breast cancer cells

characteristic: cell type

text: Santa Cruz

text: Homo sapiens

text: E2 at final conc. 100nM for 3 hrs


text: Cancer Research UK Cambridge Institute

text: live

text: Generic

text: breast cancer cells

characteristic: chip antibody

text: Santa Cruz

characteristic: chip antibody vendor

text: Homo sapiens

text: Vehicle


text: Cancer Research UK Cambridge Institute

text: live

text: Generic

text: breast cancer cells

text: Abcam

text: negative control

characteristic: genotype/variation

text: Homo sapiens

characteristic: organism

text: E2 at final conc. 100nM for 3 hrs


text: Cancer Research UK Cambridge Institute

text: live

text: Generic

text: breast cancer cells

text: Abcam

text: GATA knockdown

text: Homo sapiens

text: E2 at final conc. 100nM for 3 hrs

characteristic: stimulated with

characteristic: title


characteristic: External Id

text: Cancer Research UK Cambridge Institute

text: live

text: Generic

text: breast cancer cells

text: Santa Cruz

text: negative control

text: Homo sapiens

text: E2 at final conc. 100nM for 3 hrs

characteristic: tranfected with


text: Cancer Research UK Cambridge Institute

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: breast cancer cells

text: Santa Cruz

text: GATA knockdown

text: Homo sapiens

text: E2 at final conc. 100nM for 3 hrs


text: Cancer Research UK Cambridge Institute

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: breast cancer cells

text: Santa Cruz

text: negative control

text: Homo sapiens

text: Vehicle


text: Cancer Research UK Cambridge Institute

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: breast cancer cells

text: Santa Cruz

text: GATA knockdown

text: Homo sapiens

text: Vehicle


text: Cancer Research UK Cambridge Institute

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: breast cancer cells

text: Homo sapiens

text: Full Media


text: Beijing Genome Institute

text: live

text: Generic

text: Prunus mume

text: Sample from Prunus mume


text: Medicine, University of British Columbia

text: live

text: Generic

text: monocytes

characteristic: cell type

text: healthy volunteers

characteristic: disease status

text: Homo sapiens

text: monocytes from healthy volunteers

text: untreated 1

text: untreated

characteristic: treatment


text: live

text: Generic

text: monocytes

text: healthy volunteers

text: Homo sapiens

text: monocytes from healthy volunteers

text: 4 hours with 20 μg/ml IDR-1018 1


text: live

text: Generic

text: monocytes

text: healthy volunteers

text: Homo sapiens

text: monocytes from healthy volunteers

text: untreated 2

text: untreated


text: live

text: Generic

text: monocytes

text: healthy volunteers

text: Homo sapiens

text: monocytes from healthy volunteers

text: 4 hours with 20 μg/ml IDR-1018 2


text: live

text: Generic

text: monocytes

text: healthy volunteers

text: Homo sapiens

text: monocytes from healthy volunteers

text: untreated 3

text: untreated


text: live

text: Generic

text: monocytes

text: healthy volunteers

text: Homo sapiens

text: monocytes from healthy volunteers

text: 4 hours with 20 μg/ml IDR-1018 3


name: P.pacificus hypersusceptibility mutant (unc)

text: live

text: Generic

text: Genome sequencing of an EMS-mutagenized P. pacificus strain

characteristic: description

text: USA: California

text: unc-mutant

characteristic: label

text: Pristionchus pacificus

characteristic: strain

text: Pristionchus pacificus, (Bacillus sp. 142 hypersusceptible mutant, unc mutant)


text: The Jackson Laboratory

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: body

characteristic: cellular region

text: CELF4 wt and knockout transcriptome by localization to hippocampal CA1 cell body or neuropil

text: Mus musculus

characteristic: organism

text: hippocampal CA1

characteristic: tissue

text: Mus musculus 129S1 hippocampus cell body

characteristic: title


characteristic: External Id

text: The Jackson Laboratory

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Generic

text: neuropil

text: Mus musculus

text: hippocampal CA1

text: Mus musculus 129S1 hippocampus neuropil


text: department of chemistry, University of Chicago

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: HeLa

characteristic: cell line

text: Homo sapiens

characteristic: passages

text: HeLa cells

text: HeLa siControl RNASeq

text: siControl


text: live

text: Generic

characteristic: SRA accession

text: HeLa

text: Homo sapiens

text: HeLa cells

text: HeLa siALKB5 RNASeq

characteristic: treatment


text: live

text: Generic

text: 12 weeks

characteristic: age

text: testicular cells

characteristic: cell type

characteristic: genetic background

text: wt

characteristic: genotype

text: Mus musculus

text: testicular cells

text: mouse wt RNASeq


text: live

text: Generic

text: 12 weeks

text: testicular cells

text: ALKBH5 KO

text: Mus musculus

characteristic: organism

text: testicular cells

text: mouse ALKBH5 KO RNASeq

characteristic: title


characteristic: External Id

text: The Jackson Laboratory

characteristic: INSDC center name

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: neuropil

characteristic: cellular region

text: Paired end RNA sequencing of the CA1 region of the hippocampus from mouse strain 129S1( / ) (WT) and 129S1-Celf4 (tm1Frk/tm1Frk) (DEL) male adult, dissected into cell body (cb) and neuropil (np) components. 3 biological replicates (A,B,C or A,B,D) from each strain-genotype were carried through to sequencing (R1, R2 forward and reverse paired ends, respectively)

characteristic: description

text: Mus musculus

text: 129S1-Celf4 tm1Frk/tm1Frk (DEL)

characteristic: strain

text: hippocampal CA1

characteristic: tissue

text: Mus musculus 129S1-Celf4(tm1Frk/tm1Frk) (DEL) hippocampus neuropil


text: The Jackson Laboratory

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Generic

text: cell body

text: Mus musculus

text: 129S1-Celf4 tm1Frk/tm1Frk (DEL)

text: hippocampal CA1

text: Mus musculus 129S1-Celf4(tm1Frk/tm1Frk) (DEL) cell body


8 weeks of age B6.V-Lepob/J

text: University of Copenhagen

text: live

text: Generic

characteristic: SRA accession

text: MTs..001 ACGAGTGCGT CCTAYGGGRBGCASCAG 8 weeks MTs..002 AGACGCACTC CCTAYGGGRBGCASCAG 8 weeks MTs..003 ATCAGACACG CCTAYGGGRBGCASCAG 8 weeks MTs..004 ATATCGCGAG CCTAYGGGRBGCASCAG 8 weeks MTs..005 CTCGCGTGTC CCTAYGGGRBGCASCAG 8 weeks MTs..006 TAGTATCAGC CCTAYGGGRBGCASCAG 8 weeks MTs..007 TCTCTATGCG CCTAYGGGRBGCASCAG 8 weeks MTs..008 TGATACGTCT CCTAYGGGRBGCASCAG 8 weeks MTs..009 TACTGAGCTA CCTAYGGGRBGCASCAG 8 weeks MTs..010 CGAGAGATAC CCTAYGGGRBGCASCAG 8 weeks MTs..011 ATACGACGTA CCTAYGGGRBGCASCAG 8 weeks MTs..012 TCACGTACTA CCTAYGGGRBGCASCAG 8 weeks MTs..013 CGTCTAGTAC CCTAYGGGRBGCASCAG 8 weeks MTs..014 TCTACGTAGC CCTAYGGGRBGCASCAG 8 weeks MTs..015 TGTACTACTC CCTAYGGGRBGCASCAG 8 weeks MTs..016 ACGACTACAG CCTAYGGGRBGCASCAG 8 weeks MTs..017 CGTAGACTAG CCTAYGGGRBGCASCAG 8 weeks MTs..018 TACGAGTATG CCTAYGGGRBGCASCAG 8 weeks MTs..019 TACTCTCGTG CCTAYGGGRBGCASCAG 8 weeks

text: Mus musculus domesticus

text: 8 weeks of age B6.V-Lepob/J


16 weeks of age B6.V-Lepob/J

text: University of Copenhagen

text: live

text: Generic

text: MTe..001 TCGTCGCTCG CCTAYGGGRBGCASCAG 16 weeks MTe..002 ACATACGCGT CCTAYGGGRBGCASCAG 16 weeks MTe..003 ACGCGAGTAT CCTAYGGGRBGCASCAG 16 weeks MTe..004 ACTACTATGT CCTAYGGGRBGCASCAG 16 weeks MTe..005 ACTGTACAGT CCTAYGGGRBGCASCAG 16 weeks MTe..006 AGACTATACT CCTAYGGGRBGCASCAG 16 weeks MTe..007 AGCGTCGTCT CCTAYGGGRBGCASCAG 16 weeks MTe..008 AGTACGCTAT CCTAYGGGRBGCASCAG 16 weeks MTe..009 ATAGAGTACT CCTAYGGGRBGCASCAG 16 weeks MTe..010 CACGCTACGT CCTAYGGGRBGCASCAG 16 weeks MTe..011 CAGTAGACGT CCTAYGGGRBGCASCAG 16 weeks MTe..012 CGACGTGACT CCTAYGGGRBGCASCAG 16 weeks MTe..013 TACACACACT CCTAYGGGRBGCASCAG 16 weeks MTe..014 TACACGTGAT CCTAYGGGRBGCASCAG 16 weeks MTe..015 TACAGATCGT CCTAYGGGRBGCASCAG 16 weeks MTe..016 TACGCTGTCT CCTAYGGGRBGCASCAG 16 weeks MTe..017 TAGTGTAGAT CCTAYGGGRBGCASCAG 16 weeks MTe..018 TCGATCACGT CCTAYGGGRBGCASCAG 16 weeks MTe..019 TCGCACTAGT CCTAYGGGRBGCASCAG 16 weeks

text: Mus musculus domesticus

text: 16 weeks of age B6.V-Lepob/J


text: Zavolan, Biozentrum, University of Basel

text: live

text: Generic

characteristic: cell line

text: alkaline hydrolysis

characteristic: fragmentation

text: Homo sapiens

text: A-seq NO siRNA


text: live

text: Generic

text: alkaline hydrolysis

text: Homo sapiens

characteristic: organism

text: scrambled-A

characteristic: sirna

text: A-seq siRNA Control

characteristic: title


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: alkaline hydrolysis

text: Homo sapiens

text: Ambion S224836

text: A-seq siRNA CF Im25


text: live

text: Generic

text: alkaline hydrolysis

text: Homo sapiens

text: Ambion S21772

text: A-seq siRNA CF Im59


text: live

text: Generic

text: RNase I digestion

text: Homo sapiens

text: scrambled-A

text: A-seq siRNA Ctrl for CF Im68 KD


text: live

text: Generic

text: RNase I digestion

text: Homo sapiens

text: 5'-NNGACCGAGA UUACAUGGAUA-3' dsRNA oligo from Dharmacon

text: A-seq siRNA CF Im68 2


text: University of Konstanz

text: live

text: Generic

text: Amphilophus citrinellus

text: Apoyeque thick


text: University of Konstanz

text: live

text: Generic

text: Amphilophus citrinellus

text: Apoyeque thin


text: Cambridge Research Institute

text: live

text: Generic

text: embryonic stem cells

characteristic: cell type

text: wild-type

characteristic: genotype

text: Mus musculus

text: 5-formylcytosine (5fC)

characteristic: pulldown target

text: Embryonic stem cells, WT, 5fC

characteristic: strain/background


text: Cambridge Research Institute

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: embryonic stem cells

text: wild-type

text: Mus musculus

text: input

text: Embryonic stem cells, WT, input


text: Cambridge Research Institute

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: embryonic stem cells

text: Mus musculus

text: 5-formylcytosine (5fC)

text: non-targeting (control)

text: Embryonic stem cells, siRNA control, 5fC


text: Cambridge Research Institute

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: embryonic stem cells

text: Mus musculus

text: 5-formylcytosine (5fC)

text: TDG-KD

text: Embryonic stem cells, TDG siRNA, 5fC


Drosophila ercepeae

text: University of California, Davis

text: live

text: Generic

characteristic: SRA accession

text: Drosophila ercepeae

text: Drosophila ercepeae


Drosophila merina

text: University of California, Davis

text: live

text: Generic

text: Drosophila merina

text: Drosophila merina


Drosophila pseudoananassae

text: University of California, Davis

text: live

text: Generic

text: Drosophila pseudoananassae pseudoananassae

text: Drosophila pseudoananassae


Drosophila pseudoananassae nigrens

text: University of California, Davis

text: live

text: Generic

text: Drosophila pseudoananassae nigrens

text: Drosophila pseudoananassae nigrens


Drosophila malerkotliana malerkotliana

text: University of California, Davis

text: live

text: Generic

text: Drosophila malerkotliana malerkotliana

text: Drosophila malerkotliana malerkotliana


Drosophila malerkotliana pallens

text: University of California, Davis

text: live

text: Generic

text: Drosophila malerkotliana pallens

text: Drosophila malerkotliana pallens


text: Yale University

text: live

text: Generic

characteristic: antibody

text: Drosophila melanogaster

text: ovary

characteristic: strain

text: ovary

characteristic: tissue

text: H3K27m3 ChIP-seq for wild type flies


text: Yale University

text: live

text: Generic

text: Drosophila melanogaster

characteristic: organism

text: ovary

text: ovary

text: H3K27m3 ChIP-seq for piwi mutated flies

characteristic: title


sample CF1

characteristic: External Id

text: Stanford University

characteristic: INSDC center name

text: live

text: Generic

text: lung

characteristic: body site

text: induced sputum

characteristic: description

text: cystic fibrosis

characteristic: disease

text: disease

characteristic: health-state

text: human lung metagenome

text: cystic fibrosis

characteristic: phenotype

text: induced sputum

characteristic: sample-type

text: Homo sapiens

characteristic: specific host

text: Generic sample from Bacteria


sample CF10

text: Stanford University

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: lung

text: induced sputum

text: cystic fibrosis

text: disease

text: human lung metagenome

text: cystic fibrosis

text: induced sputum

text: Homo sapiens

text: Generic sample from Bacteria


sample CF11

text: Stanford University

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: lung

text: induced sputum

text: cystic fibrosis

text: disease

text: human lung metagenome

text: cystic fibrosis

text: induced sputum

text: Homo sapiens

text: Generic sample from Bacteria


sample CF12

text: Stanford University

text: live

text: Generic

text: lung

text: induced sputum

text: cystic fibrosis

text: disease

text: human lung metagenome

characteristic: organism

text: cystic fibrosis

text: induced sputum

text: Homo sapiens

text: Generic sample from Bacteria

characteristic: title


sample CF13

characteristic: External Id

text: Stanford University

characteristic: INSDC center name

text: live

text: Generic

text: lung

text: induced sputum

text: cystic fibrosis

text: disease

text: human lung metagenome

text: cystic fibrosis

text: induced sputum

text: Homo sapiens

text: Generic sample from Bacteria


sample CF14

text: Stanford University

text: live

text: Generic

text: lung

characteristic: body site

text: induced sputum

characteristic: description

text: cystic fibrosis

text: disease

text: human lung metagenome

text: cystic fibrosis

text: induced sputum

text: Homo sapiens

text: Generic sample from Bacteria


sample CF15

text: Stanford University

text: live

text: Generic

text: lung

text: induced sputum

text: cystic fibrosis

characteristic: disease

text: disease

characteristic: health-state

text: human lung metagenome

text: cystic fibrosis

text: induced sputum

text: Homo sapiens

text: Generic sample from Bacteria


sample CF16

text: Stanford University

text: live

text: Generic

text: lung

text: induced sputum

text: cystic fibrosis

text: disease

text: human lung metagenome

text: cystic fibrosis

characteristic: phenotype

text: induced sputum

characteristic: sample-type

text: Homo sapiens

text: Generic sample from Bacteria


sample CF2

text: Stanford University

characteristic: INSDC first public

text: live

text: Generic

text: lung

text: induced sputum

text: cystic fibrosis

text: disease

text: human lung metagenome

text: cystic fibrosis

text: induced sputum

text: Homo sapiens

characteristic: specific host

text: Generic sample from Bacteria


sample CF3

text: Stanford University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: lung

text: induced sputum

text: cystic fibrosis

text: disease

text: human lung metagenome

text: cystic fibrosis

text: induced sputum

text: Homo sapiens

text: Generic sample from Bacteria


sample CF4

text: Stanford University

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: lung

text: induced sputum

text: cystic fibrosis

text: disease

text: human lung metagenome

text: cystic fibrosis

text: induced sputum

text: Homo sapiens

text: Generic sample from Bacteria


sample CF5

text: Stanford University

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: lung

text: induced sputum

text: cystic fibrosis

text: disease

text: human lung metagenome

text: cystic fibrosis

text: induced sputum

text: Homo sapiens

text: Generic sample from Bacteria


sample CF6

text: Stanford University

text: live

text: Generic

text: lung

text: induced sputum

text: cystic fibrosis

text: disease

text: human lung metagenome

characteristic: organism

text: cystic fibrosis

text: induced sputum

text: Homo sapiens

text: Generic sample from Bacteria

characteristic: title


sample CF7

characteristic: External Id

text: Stanford University

characteristic: INSDC center name

text: live

text: Generic

text: lung

text: induced sputum

text: cystic fibrosis

text: disease

text: human lung metagenome

text: cystic fibrosis

text: induced sputum

text: Homo sapiens

text: Generic sample from Bacteria


sample CF8

text: Stanford University

text: live

text: Generic

text: lung

characteristic: body site

text: induced sputum

characteristic: description

text: cystic fibrosis

text: disease

text: human lung metagenome

text: cystic fibrosis

text: induced sputum

text: Homo sapiens

text: Generic sample from Bacteria


sample CF9

text: Stanford University

text: live

text: Generic

text: lung

text: induced sputum

text: cystic fibrosis

characteristic: disease

text: disease

characteristic: health-state

text: human lung metagenome

text: cystic fibrosis

text: induced sputum

text: Homo sapiens

text: Generic sample from Bacteria


sample CT1

text: Stanford University

text: live

text: Generic

text: lung

text: induced sputum

text: healthy

text: healthy

text: human lung metagenome

text: healthy

characteristic: phenotype

text: induced sputum

characteristic: sample-type

text: Homo sapiens

text: Generic sample from Bacteria


sample CT2

text: Stanford University

characteristic: INSDC first public

text: live

text: Generic

text: lung

text: induced sputum

text: healthy

text: healthy

text: human lung metagenome

text: healthy

text: induced sputum

text: Homo sapiens

characteristic: specific host

text: Generic sample from Bacteria


sample CT3

text: Stanford University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: lung

text: induced sputum

text: healthy

text: healthy

text: human lung metagenome

text: healthy

text: induced sputum

text: Homo sapiens

text: Generic sample from Bacteria


sample CT4

text: Stanford University

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: lung

text: induced sputum

text: healthy

text: healthy

text: human lung metagenome

text: healthy

text: induced sputum

text: Homo sapiens

text: Generic sample from Bacteria


sample CT5

text: Stanford University

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: lung

text: induced sputum

text: healthy

text: healthy

text: human lung metagenome

text: healthy

text: induced sputum

text: Homo sapiens

text: Generic sample from Bacteria


sample CT6

text: Stanford University

text: live

text: Generic

text: lung

text: induced sputum

text: healthy

text: healthy

text: human lung metagenome

characteristic: organism

text: healthy

text: induced sputum

text: Homo sapiens

text: Generic sample from Bacteria

characteristic: title


sample CT7

characteristic: External Id

text: Stanford University

characteristic: INSDC center name

text: live

text: Generic

text: lung

text: induced sputum

text: healthy

text: healthy

text: human lung metagenome

text: healthy

text: induced sputum

text: Homo sapiens

text: Generic sample from Bacteria


sample CT8

text: Stanford University

text: live

text: Generic

text: lung

characteristic: body site

text: induced sputum

characteristic: description

text: healthy

text: healthy

text: human lung metagenome

text: healthy

text: induced sputum

text: Homo sapiens

text: Generic sample from Bacteria


sample CT9

text: Stanford University

text: live

text: Generic

text: lung

text: induced sputum

text: healthy

characteristic: disease

text: healthy

characteristic: health-state

text: human lung metagenome

text: healthy

text: induced sputum

text: Homo sapiens

text: Generic sample from Bacteria


sample PUL1

text: Stanford University

text: live

text: Generic

text: lung

text: explanted lung

text: cystic fibrosis

text: disease

text: human lung metagenome

text: cystic fibrosis

characteristic: phenotype

text: lung tissue/secretion

characteristic: sample-type

text: Homo sapiens

text: Generic sample from Bacteria


sample PUL10

text: Stanford University

characteristic: INSDC first public

text: live

text: Generic

text: lung

text: explanted lung

text: interstitial lung disease

text: disease

text: human lung metagenome

text: interstitial lung disease

text: lung tissue/secretion

text: Homo sapiens

characteristic: specific host

text: Generic sample from Bacteria


sample PUL11

text: Stanford University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: lung

text: explanted lung

text: human lung metagenome

text: interstitial lung disease

text: Homo sapiens

text: Generic sample from Bacteria


sample PUL12

text: Stanford University

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: lung

text: explanted lung

text: human lung metagenome

text: idiopathic pulmonary fibrosis

text: Homo sapiens

text: Generic sample from Bacteria


sample PUL14

text: Stanford University

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: lung

text: explanted lung

text: chronic obstructive pulmonary disease

text: disease

text: human lung metagenome

text: chronic obstructive pulmonary disease

text: lung tissue/secretion

text: Homo sapiens

text: Generic sample from Bacteria


sample PUL15

text: Stanford University

text: live

text: Generic

text: lung

text: explanted lung

text: cystic fibrosis

text: disease

text: human lung metagenome

characteristic: organism

text: cystic fibrosis

text: lung tissue/secretion

text: Homo sapiens

text: Generic sample from Bacteria

characteristic: title


sample PUL16

characteristic: External Id

text: Stanford University

characteristic: INSDC center name

text: live

text: Generic

text: lung

text: explanted lung

text: cystic fibrosis

text: disease

text: human lung metagenome

text: cystic fibrosis

text: lung tissue/secretion

text: Homo sapiens

text: Generic sample from Bacteria


sample PUL17

text: Stanford University

text: live

text: Generic

text: lung

characteristic: body site

text: explanted lung

characteristic: description

text: interstitial lung disease

text: disease

text: human lung metagenome

text: interstitial lung disease

text: lung tissue/secretion

text: Homo sapiens

text: Generic sample from Bacteria


sample PUL18

text: Stanford University

text: live

text: Generic

text: lung

text: explanted lung

text: interstitial lung disease

characteristic: disease

text: disease

characteristic: health-state

text: human lung metagenome

text: interstitial lung disease

text: lung tissue/secretion

text: Homo sapiens

text: Generic sample from Bacteria


sample PUL19

text: Stanford University

text: live

text: Generic

text: lung

text: explanted lung

text: human lung metagenome

text: idiopathic pulmonary fibrosis

characteristic: phenotype

text: Homo sapiens

text: Generic sample from Bacteria


sample PUL2

text: Stanford University

characteristic: INSDC first public

text: live

text: Generic

text: lung

text: explanted lung

text: cystic fibrosis

text: disease

text: human lung metagenome

text: cystic fibrosis

text: lung tissue/secretion

characteristic: sample-type

text: Homo sapiens

text: Generic sample from Bacteria


sample PUL20

text: Stanford University

characteristic: INSDC last update

text: live

text: Generic

text: lung

text: explanted lung

text: cystic fibrosis

text: disease

text: human lung metagenome

text: cystic fibrosis

text: lung tissue/secretion

text: Homo sapiens

characteristic: specific host

text: Generic sample from Bacteria


sample PUL21

text: Stanford University

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: lung

text: explanted lung

text: chronic obstructive pulmonary disease

text: disease

text: human lung metagenome

text: chronic obstructive pulmonary disease

text: lung tissue/secretion

text: Homo sapiens

text: Generic sample from Bacteria


sample PUL24

text: Stanford University

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: lung

text: explanted lung

text: interstitial lung disease

text: disease

text: human lung metagenome

text: interstitial lung disease

text: lung tissue/secretion

text: Homo sapiens

text: Generic sample from Bacteria


sample PUL3

text: Stanford University

text: live

text: Generic

characteristic: SRA accession

text: lung

text: explanted lung

text: interstitial lung disease

text: disease

text: human lung metagenome

characteristic: organism

text: interstitial lung disease

text: lung tissue/secretion

text: Homo sapiens

text: Generic sample from Bacteria


sample PUL4

characteristic: External Id

text: Stanford University

text: live

text: Generic

text: lung

text: explanted lung

text: interstitial lung disease

text: disease

text: human lung metagenome

text: interstitial lung disease

text: lung tissue/secretion

text: Homo sapiens

text: Generic sample from Bacteria

characteristic: title


sample PUL5

text: Stanford University

characteristic: INSDC center name

text: live

text: Generic

text: lung

characteristic: body site

text: explanted lung

text: idiopathic pulmonary fibrosis

text: disease

text: human lung metagenome

text: idiopathic pulmonary fibrosis

text: lung tissue/secretion

text: Homo sapiens

text: Generic sample from Bacteria


sample PUL6

text: Stanford University

text: live

text: Generic

text: lung

text: explanted lung

characteristic: description

text: cystic fibrosis

characteristic: disease

text: disease

text: human lung metagenome

text: cystic fibrosis

text: lung tissue/secretion

text: Homo sapiens

text: Generic sample from Bacteria


sample PUL7

text: Stanford University

text: live

text: Generic

text: lung

text: explanted lung

text: human lung metagenome

text: chronic obstructive pulmonary disease

characteristic: phenotype

text: Homo sapiens

text: Generic sample from Bacteria


sample PUL8

text: Stanford University

characteristic: INSDC first public

text: live

text: Generic

text: lung

text: explanted lung

text: cystic fibrosis

text: disease

characteristic: health-state

text: human lung metagenome

text: cystic fibrosis

text: lung tissue/secretion

text: Homo sapiens

text: Generic sample from Bacteria


sample PUL9

text: Stanford University

characteristic: INSDC last update

text: live

text: Generic

text: lung

text: explanted lung

text: human lung metagenome

text: cystic fibrosis

text: Homo sapiens

text: Generic sample from Bacteria


D. merina

text: University of California, Davis

text: live

text: Generic

characteristic: collection date

text: Madagascar: Mandraka

characteristic: geo loc name

text: Drosophila merina

text: General Sample for Drosophila merina


text: Henan Institute of Science and Technology

text: live

characteristic: INSDC status

text: Generic

text: Indica

characteristic: cultivar

text: four-week-old seedling

characteristic: dev-stage

text: Oryza sativa Indica Group

text: leaf

characteristic: tissue-type

text: Rice seedling post inoculation with Magnaporthe grisea library


text: Shanghai Jiaotong University

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Yulu

text: Library constructed using Clontech PCR-Select cDNA Subtraction kit. Tester: root tissue from cultivar Yulu upon salt treatment; Driver: root tissue from cultivar Yulu without salt treatment.

text: Cucumis melo

characteristic: organism

text: root

text: Melon Yulu Forward SSH library

characteristic: vector


characteristic: External Id

text: DOE Joint Genome Institute

characteristic: INSDC center name

text: live

text: Generic

text: The library was made from oligo(dT) primed cDNA and cloned into the pCMV-SPORT6 vector (Invitrogen Corp., Carlsbad, CA). PolyA RNA was primed with an oligo dT primer (5'-GACTAGTTCTAGATCGCGAGCGGCCGCCCTTTTTTTTTTTTTTT-3'), ligated to a SalI adapter (5'-TCGACCCACGCGTCCG and 5'- CGGACGCGTGGG) and digested with NotI. cDNA was size selected from 0.8-2kb using 1.1% agarose gel electrophoresis then ligated into NotI and SalI-digested pCMV-SPORT6 vector. The library was constructed and sequencing performed at DOE Joint Genome Institute (Walnut Creek, CA)

text: DH10B TonA

characteristic: lab-host

text: Aquilegia formosa x Aquilegia pubescens

text: SalI

text: NotI

characteristic: strain

text: pooled seedlings, vernalized apicies, fruits

text: CCPF Aquilegia formosa 412 x Aquilegia pubescens pooled RNA (L)

characteristic: title


text: DOE Joint Genome Institute

characteristic: INSDC first public

text: live

text: Generic

text: The library was made from oligo(dT) primed cDNA and cloned into the pCMV-SPORT6 vector (Invitrogen Corp., Carlsbad, CA). PolyA RNA was primed with an oligo dT primer (5'-GACTAGTTCTAGATCGCGAGCGGCCGCCCTTTTTTTTTTTTTTT-3'), ligated to a SalI adapter (5'-TCGACCCACGCGTCCG and 5'- CGGACGCGTGGG) and digested with NotI. cDNA was size selected from 2-8kb using 1.1% agarose gel electrophoresis then ligated into NotI and SalI-digested pCMV-SPORT6 vector. The library was constructed and sequencing performed at DOE Joint Genome Institute (Walnut Creek, CA)

characteristic: description

text: DH10B TonA

text: Aquilegia formosa x Aquilegia pubescens

text: SalI

text: NotI

text: CCPG Aquilegia formosa 412 x Aquilegia pubescens pooled RNA (H)


characteristic: INSDC last update

text: live

text: Generic

text: The library was made from oligo(dT)-primed cDNA and cloned into vector pDNR-LIB (Clontech Laboratories, Inc., Mountain View, CA) using the SMART system (BD Biosciences, San Jose, CA). To generate the first strand, polyA RNA was primed with an oligo(dT) primer (5'-ATTCTAGAGGCCGAGGCGGCCGACATG(T)30 VN-3', where V = A, G, or C). The second strand was synthesized by PCR using primer 5'-AAGCAGTGGTATCAACGCAGAGTGGCCATTACGGCCGGG-3' followed by digestion of the SfiI sites. cDNA was size selected then ligated into pDNR-LIB. Library is normalized. Library was created and sequencing done by the DOE Joint Genome Institute (Walnut Creek, CA)

text: Bigelowiella natans

text: SfiIA

text: SfiIB

text: CFAO Bigelowiella natans normalized

text: pDNR-LIB


text: Institute of Plant Genetics and Crop Plant Research (IPK)

text: live

text: Generic

text: all leaf tissues

characteristic: cell type

text: Genomic Luzula elegans DNA isolated from leafs was fragmented by sonication. Jagged DNA ends were removed using BAL-31 exonuclease. DNA was purified and electrophoresed. A 150-600 bp long fraction was excised and DNA ends were repaired by T4 DNA polymerase and Klenow fragment activity. Repaired fragments were A-tailed by Taq polymerase treatment and cloned into the pCR2.1 vector. Library was screened by dot blot hybridization with total genomic Luzula elegans DNA for high copy sequences.

text: 4-week-old seedlings

text: Escherichia coli

text: Luzula elegans

text: leaves

text: Small genomic plasmid library of Luzula elegans

text: Plasmid


text: University of Konstanz

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: SRA accession

text: Amphilophus citrinellus

text: Apoyeque thin


text: University of Konstanz

text: live

text: Generic

text: Amphilophus labiatus

text: Managua thick


text: University of Konstanz

text: live

text: Generic

text: Amphilophus citrinellus

text: Managua thin


text: University of Konstanz

text: live

text: Generic

text: Amphilophus labiatus

text: Nicaragua thick


text: University of Konstanz

text: live

text: Generic

text: Amphilophus citrinellus

text: Nicaragua thin


text: University of Konstanz

text: live

text: Generic

text: Amphilophus citrinellus

text: Masaya thick


text: University of Konstanz

text: live

text: Generic

text: Amphilophus citrinellus

text: Masaya thin


text: CSIR-IICB

text: live

text: Generic

text: control

text: Podophyllum

text: De novo sequencing and analysis of Podophyllum hexandrum transcriptome


text: CSIR-IICB

text: live

text: Generic

text: treated with methyl jasmonate

text: Podophyllum

text: De novo sequencing and analysis of Podophyllum hexandrum leaf transcriptome


text: BC Cancer Agency Michael Smith Genome Sciences Centre

text: live

text: Generic

text: Plant-Branch-Tip

characteristic: anatomic site

text: Generic

characteristic: biosamplemodel

text: White spruce flushing bud sample SMarTFor_1; genotype PG29

characteristic: genotype

characteristic: isolate

text: 53.853143 N 122.236253 W

characteristic: lat lon

text: Picea glauca

text: Flushing bud

characteristic: tissue


characteristic: External Id

text: Krembil Family Epigenetic Research Laboratory, Centre for Addiction and Mental Health

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 49 years

characteristic: age

text: 10 ng of glucosylated sheared DNA were subjected to 10 U of MspI digestion in a final volume of 20 µl for 12 h at 37ºC (50 fold surplus of the enzyme over the DNA substrate), followed by enzyme inactivation at 80ºC for 10 min.

characteristic: enzyme digestion

text: Homo sapiens

characteristic: organism

characteristic: post mortem interval

text: female

characteristic: sex

text: Frontal cortex (BA10) of the brain - post-mortem sample

text: Sample 71, GluMspI, Replicate 2


characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: 49 years

text: 10 ng of native sheared DNA were subjected to 10 U of MspI digestion in a final volume of 20 µl for 12 h at 37ºC (50 fold surplus of the enzyme over the DNA substrate), followed by enzyme inactivation at 80ºC for 10 min.

text: Homo sapiens

text: female

text: Sample 71, MspI, Replicate 2

characteristic: title


text: live

text: Generic

characteristic: SRA accession

text: 49 years

text: Homo sapiens

text: female

text: Sample 71, Undigested DNA, Replicate 2


text: live

text: Generic

text: 49 years

text: Homo sapiens

text: female

text: Sample 71, GluMspI, Replicate 1


text: live

text: Generic

text: 49 years

text: Homo sapiens

text: female

text: Sample 71, Undigested DNA, Replicate 1


text: live

text: Generic

text: 49 years

text: Homo sapiens

text: female

text: Sample 71, MspI, Replicate 1


text: live

text: Generic

text: 49 years

text: Homo sapiens

text: female

text: Sample 71, MspI, Replicate 3


text: live

text: Generic

text: 49 years

text: Homo sapiens

text: female

text: Sample 71, GluMspI, Replicate 3


text: live

text: Generic

text: 49 years

text: Homo sapiens

text: female

text: Sample 71, Undigested DNA, Replicate 3


text: L. Ryan Baugh, Biology, Duke University

text: live

text: Generic

text: Starved L1 larvae

characteristic: cell type

text: 5' poly-phosphatase, Terminator exonuclease, Tabacco acid pyrophosphatase

characteristic: enzymes used

text: Caenorhabditis elegans

characteristic: sequencing direction

text: Starved L1 larvae

characteristic: strain

text: 5' scRNA-seq rep1


characteristic: External Id

text: L. Ryan Baugh, Biology, Duke University

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

text: Starved L1 larvae

text: Caenorhabditis elegans

text: Starved L1 larvae

text: 5' scRNA-seq rep2


text: L. Ryan Baugh, Biology, Duke University

text: live

text: Generic

characteristic: NCBI submission package

text: Starved L1 larvae

text: 5' poly-phosphatase, Terminator exonuclease, Tobacco acid pyrophosphatase

text: Caenorhabditis elegans

text: Starved L1 larvae

text: 3' scRNA-seq N2 rep1


text: L. Ryan Baugh, Biology, Duke University

text: live

text: Generic

text: Starved L1 larvae

text: Caenorhabditis elegans

characteristic: organism

text: Starved L1 larvae

text: 3' scRNA-seq N2 rep2


text: L. Ryan Baugh, Biology, Duke University

text: live

text: Generic

text: Starved L1 larvae

text: Caenorhabditis elegans

text: Starved L1 larvae

text: 3' scRNA-seq TFIIS mutant rep1


text: L. Ryan Baugh, Biology, Duke University

text: live

text: Generic

text: Starved L1 larvae

text: Caenorhabditis elegans

text: Starved L1 larvae

text: 3' scRNA-seq TFIIS mutant rep2


text: L. Ryan Baugh, Biology, Duke University

text: live

text: Generic

text: Starved L1 larvae

text: Caenorhabditis elegans

text: Starved L1 larvae

text: N2 no enzymes


text: L. Ryan Baugh, Biology, Duke University

text: live

text: Generic

text: Starved L1 larvae

text: Tobacco acid pyrophosphatase

text: Caenorhabditis elegans

text: Starved L1 larvae

text: N2 TAP only


text: L. Ryan Baugh, Biology, Duke University

text: live

text: Generic

text: Starved L1 larvae

text: Terminator exonuclease

text: Caenorhabditis elegans

text: Starved L1 larvae

text: N2 Terminator only


text: L. Ryan Baugh, Biology, Duke University

text: live

text: Generic

text: Starved L1 larvae

text: Terminator, Tobacco acid pyrophosphatase

text: Caenorhabditis elegans

text: Starved L1 larvae

text: N2 Terminator and TAP only


text: L. Ryan Baugh, Biology, Duke University

text: live

text: Generic

text: S2 cells

text: Drosophila melanogaster

text: S2 cells

text: S2 no enzymes


text: L. Ryan Baugh, Biology, Duke University

text: live

text: Generic

text: S2 cells

text: Tobacco acid pyrophosphatase

text: Drosophila melanogaster

text: S2 cells

text: S2 TAP only


text: L. Ryan Baugh, Biology, Duke University

text: live

text: Generic

text: S2 cells

text: Terminator exonuclease

text: Drosophila melanogaster

text: S2 cells

text: S2 Terminator only


text: L. Ryan Baugh, Biology, Duke University

text: live

text: Generic

text: S2 cells

text: Terminator exonuclease, Tobacco acid pyrophosphatase

text: Drosophila melanogaster

text: S2 cells

text: S2 Terminator and TAP only


text: Swedish University of Agricultural Sciences

text: live

text: Generic

text: Fungal ITS coding DNA from a humus sample from a forest site in Abisko, isolated by chloroform precipitation and PCR amplification of the fungal ITS2 region

characteristic: description

text: organismal metagenomes


text: BGI

text: live

text: Generic

text: Prunus mume

text: bud

text: Prunus mume

characteristic: species

text: bud

characteristic: tissue

text: bud tissue from Prunus mume

text: landrace

characteristic: type


text: BGI

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Prunus mume

text: leaf

text: Prunus mume

text: leaf

text: leaf tissue from Prunus mume

text: landrace


text: BGI

text: live

characteristic: INSDC status

text: Generic

characteristic: SRA accession

text: Prunus mume

text: root

text: Prunus mume

text: root

text: root tissue from Prunus mume

characteristic: title

text: landrace


text: BGI

text: live

text: Generic

text: Prunus mume

text: stem

text: Prunus mume

text: stem

text: stem tissue from Prunus mume

text: landrace


text: BGI

text: live

text: Generic

text: Prunus mume

text: young fruit

text: Prunus mume

text: fruit

text: fruit tissue from Prunus mume

text: landrace


text: Harvell, Department of Ecology and Evolutionary Biology, Cornell University

text: live

text: Generic

text: Gorgonia ventalina

text: whole organism

text: whole organism

text: control s_6

text: control

characteristic: treatment


text: live

text: Generic

text: Gorgonia ventalina

text: whole organism

text: whole organism

text: Exposed to Aplanochytrium s_7

text: exposed to Aplanochytrium parasite


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: 26.139 N 80.129 W

text: Generic

text: Nasutitermes corniger proctodeal segment3 gut lumen

text: Nasutitermes corniger proctodeal segment 3 gut lumen

characteristic: isolation source

text: termite gut metagenome

text: Sample from termite gut metagenome


characteristic: External Id

text: Ramaswamy, Center for Cancer Research, Massachusetts General Hospital

text: live

text: Generic

text: FVB

characteristic: background/strain

text: circulating tumor cell (CTC)

characteristic: cell type

text: EpCAM CTC-Chip

characteristic: chip

text: pancreatic cancer

characteristic: disease state

text: MPANC 9

characteristic: mouse model

text: Mus musculus

text: mouse pancreatic cancer model, blood, EpCAM CTC-Chip

text: blood

text: Blood from mouse model 9 of pancreatic cancer processed by EpCAM CTC-Chip


characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: FVB

text: circulating tumor cell (CTC)

text: IgG CTC-Chip

text: pancreatic cancer

text: MPANC 9

text: Mus musculus

characteristic: organism

text: mouse pancreatic cancer model, blood, IgG CTC-Chip

text: blood

text: Blood from mouse model 9 of pancreatic cancer processed by IgG CTC-Chip


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: FVB

text: pancreatic cancer

text: MPANC 9

text: Mus musculus

text: mouse pancreatic cancer model, tumor

text: primary pancreatic tumor

characteristic: tissue

text: Tumor from mouse model 9 of pancreatic cancer


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: SRA accession

text: FVB

text: pancreatic cancer

text: MPANC 9

text: Mus musculus

text: mouse pancreatic cancer model, ascites

text: ascites from pancreatic tumor

text: Ascites from mouse model 9 of pancreatic cancer


text: live

text: Generic

text: FVB

text: circulating tumor cell (CTC)

text: EpCAM CTC-Chip

text: pancreatic cancer

text: MPANC 10

text: Mus musculus

text: blood

text: Blood from mouse model 10 of pancreatic cancer processed by EpCAM CTC-Chip

characteristic: title


characteristic: External Id

text: live

text: Generic

text: FVB

text: circulating tumor cell (CTC)

text: IgG CTC-Chip

text: pancreatic cancer

text: MPANC 10

text: Mus musculus

text: blood

text: Blood from mouse model 10 of pancreatic cancer processed by IgG CTC-Chip


text: live

text: Generic

text: FVB

characteristic: background/strain

text: pancreatic cancer

text: MPANC 10

text: Mus musculus

text: mouse pancreatic cancer model, tumor

text: primary pancreatic tumor

text: Tumor from mouse model 10 of pancreatic cancer


text: live

text: Generic

text: FVB

text: pancreatic cancer

text: MPANC 10

text: Mus musculus

text: mouse pancreatic cancer model, ascites

text: ascites from pancreatic tumor

text: Ascites from mouse model 10 of pancreatic cancer


text: live

text: Generic

characteristic: cell line

text: pancreatic cells

characteristic: cell type

text: adherent

characteristic: growth conditions

text: Mus musculus

text: pancreatic cell line, adherent, Wnt2

text: Mouse pancreatic NB508 cells induced to express Wnt2

text: yes

characteristic: wnt2 expression


characteristic: INSDC center name

text: live

text: Generic

text: pancreatic cells

text: adherent

text: Mus musculus

text: pancreatic cell line, adherent, vector

text: Mouse pancreatic NB508 cells with vector control

text: no


text: live

text: Generic

characteristic: NCBI submission model

text: pancreatic cells

text: non-adherent 3-D sphere-forming

text: Mus musculus

text: pancreatic cell line, non-adherent, Wnt2

text: Mouse pancreatic NB508 cells induced to express Wnt2 grown under non-adherent 3-D sphere-forming conditions

text: yes


text: live

text: Generic

characteristic: NCBI submission package

text: pancreatic cells

text: non-adherent 3-D sphere-forming

text: Mus musculus

text: pancreatic cell line, non-adherent, vector

text: Mouse pancreatic NB508 cells with vector control grown under non-adherent 3-D sphere-forming conditions

text: no


text: Integrative Genomics and Bioinformatics Core, Salk Institute

text: live

text: Generic

text: Tcf3(E2A) deficient pre-pro-B

text: H3K4me2 (07-030, Millipore), lot# DAM1570816

characteristic: chip antibody

text: Millipore

characteristic: chip antibody manufacturer

characteristic: genetic background

characteristic: genotype

text: Mus musculus

characteristic: organism

text: multipotent progenitor

text: pre-pro-B, H3K4me2 ChIP seq


characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Tcf3(E2A) deficient pre-pro-B

text: CTCF (07-729, Millipore), lot# DAM1772428

text: Millipore

text: Mus musculus

text: multipotent progenitor

text: pre-pro-B, CTCF ChIP seq


characteristic: External Id

text: live

text: Generic

characteristic: SRA accession

text: Tcf3(E2A) deficient pre-pro-B

text: Rad21 (ab992, Abcam), lot# GR12688-4

text: Abcam

text: Mus musculus

text: multipotent progenitor

text: pre-pro-B, Rad21 ChIP seq

characteristic: title


text: live

text: Generic

text: Tcf3(E2A) deficient pre-pro-B

characteristic: cell type

text: H3K36me3 (ab9050, Abcam), lot# 947467

text: Abcam

text: Mus musculus

text: multipotent progenitor

text: pre-pro-B, H3K36me3 ChIP seq


text: live

text: Generic

text: Rag1 deficient pro-B

text: Millipore

text: Mus musculus

text: progenitor B

text: pro-B, H3K4me2 ChIP seq


text: live

text: Generic

text: Rag1 deficient pro-B

text: Millipore

text: Mus musculus

text: progenitor B

text: pro-B, CTCF ChIP seq


text: live

text: Generic

text: Rag1 deficient pro-B

text: Rad21 (ab992, Abcam), lot# GR12688-4

text: Abcam

text: Mus musculus

text: progenitor B

text: pro-B, Rad21 ChIP seq


text: live

text: Generic

text: Rag1 deficient pro-B

text: H3K36me3 (ab9050, Abcam), lot# 947467

text: Abcam

text: Mus musculus

text: progenitor B

text: pro-B, H3K36me3 ChIP seq


text: live

text: Generic

text: Rag1 deficient pro-B

text: p300 (sc-585x, Santa Cruz), lot# H2610

text: Santa Cruz

text: Mus musculus

text: progenitor B

text: pro-B, p300 ChIP seq


text: live

text: Generic

text: Rag1 deficient pro-B

text: H3K27me3 (07-449, Millipore), lot# DAM1588246

text: Millipore

text: Mus musculus

text: progenitor B

text: pro-B, H3K27me3 ChIP seq


text: live

text: Generic

text: Rag1 deficient pro-B

text: c-Myc (sc764x, Santa Cruz), lot# H0107

text: Santa Cruz

text: Mus musculus

text: progenitor B

text: pro-B, c-Myc ChIP seq


text: live

text: Generic

text: Tcf3(E2A) deficient pre-pro-B

text: Mus musculus

text: multipotent progenitor

text: pre-pro-B, Input


text: live

text: Generic

text: Rag1 deficient pro-B

text: Mus musculus

text: progenitor B

text: pro-B, Input FA


text: live

text: Generic

text: Rag1 deficient pro-B

text: Mus musculus

text: progenitor B

text: pro-B, Input EGS


text: live

text: Generic

text: Tcf3(E2A) deficient pre-pro-B

text: Mus musculus

text: multipotent progenitor

text: pre-pro-B, GRO seq


text: live

text: Generic

text: Rag1 deficient pro-B

text: Mus musculus

text: progenitor B

text: pro-B, GRO seq


text: live

text: Generic

text: Tcf3(E2A) deficient pre-pro-B

text: Mus musculus

text: multipotent progenitor

text: pre-proB, Hi-C EGS


text: live

text: Generic

text: Rag1 deficient pro-B

text: Mus musculus

text: progenitor B

text: pro-B, Hi-C FA


text: live

text: Generic

text: Rag1 deficient pro-B

text: Mus musculus

text: progenitor B

text: pro-B, Hi-C EGS


text: Ramaswamy, Center for Cancer Research, Massachusetts General Hospital

text: live

text: Generic

text: circulating tumor cell (CTC)

text: EpCAM CTC-Chip

characteristic: chip

text: healthy

characteristic: disease state

text: healthy donor 1

characteristic: donor

text: Homo sapiens

text: healthy donor, blood, EpCAM CTC-Chip

text: blood

characteristic: tissue

text: blood from healthy human donor 1 processed by EpCAM CTC-Chip


characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: circulating tumor cell (CTC)

text: IgG CTC-Chip

text: healthy

text: healthy donor 1

text: Homo sapiens

text: healthy donor, blood, IgG CTC-Chip

text: blood

text: blood from healthy human donor 1 processed by IgG CTC-Chip


text: live

text: Generic

text: circulating tumor cell (CTC)

text: EpCAM CTC-Chip

text: healthy

text: healthy donor 2

text: Homo sapiens

text: healthy donor, blood, EpCAM CTC-Chip

text: blood

text: blood from healthy human donor 2 processed by EpCAM CTC-Chip


text: live

text: Generic

text: circulating tumor cell (CTC)

text: IgG CTC-Chip

text: healthy

text: healthy donor 2

text: Homo sapiens

text: healthy donor, blood, IgG CTC-Chip

text: blood

text: blood from healthy human donor 2 processed by IgG CTC-Chip


text: live

text: Generic

text: circulating tumor cell (CTC)

text: EpCAM CTC-Chip

text: healthy

text: healthy donor 3

text: Homo sapiens

text: healthy donor, blood, EpCAM CTC-Chip

text: blood

text: blood from healthy human donor 3 processed by EpCAM CTC-Chip


text: live

text: Generic

text: circulating tumor cell (CTC)

text: IgG CTC-Chip

text: healthy

text: healthy donor 3

text: Homo sapiens

text: healthy donor, blood, IgG CTC-Chip

text: blood

text: blood from healthy human donor 3 processed by IgG CTC-Chip


text: live

text: Generic

text: circulating tumor cell (CTC)

text: EpCAM CTC-Chip

text: healthy

text: healthy donor 4

text: Homo sapiens

text: healthy donor, blood, EpCAM CTC-Chip

text: blood

text: blood from healthy human donor 4 processed by EpCAM CTC-Chip


text: live

text: Generic

text: circulating tumor cell (CTC)

text: IgG CTC-Chip

text: healthy

text: healthy donor 4

text: Homo sapiens

text: healthy donor, blood, IgG CTC-Chip

text: blood

text: blood from healthy human donor 4 processed by IgG CTC-Chip


text: live

text: Generic

text: circulating tumor cell (CTC)

text: EpCAM CTC-Chip

text: pancreatic cancer

text: pancreatic cancer patient 2

text: Homo sapiens

text: pancreatic cancer patient, blood, EpCAM CTC-Chip

text: blood

text: blood from human pancreatic cancer patient 2 processed by EpCAM CTC-Chip


text: live

text: Generic

text: circulating tumor cell (CTC)

text: IgG CTC-Chip

text: pancreatic cancer

text: pancreatic cancer patient 2

text: Homo sapiens

text: pancreatic cancer patient, blood, IgG CTC-Chip

text: blood

text: blood from human pancreatic cancer patient 2 processed by IgG CTC-Chip


text: live

text: Generic

text: circulating tumor cell (CTC)

text: EpCAM CTC-Chip

text: pancreatic cancer

text: pancreatic cancer patient 3

text: Homo sapiens

text: blood

text: blood from human pancreatic cancer patient 3 processed by EpCAM CTC-Chip


text: live

text: Generic

text: circulating tumor cell (CTC)

text: IgG CTC-Chip

text: pancreatic cancer

text: pancreatic cancer patient 3

text: Homo sapiens

text: blood

text: blood from human pancreatic cancer patient 3 processed by IgG CTC-Chip


text: live

text: Generic

text: circulating tumor cell (CTC)

text: EpCAM CTC-Chip

text: pancreatic cancer

text: pancreatic cancer patient 4

text: Homo sapiens

text: blood

text: blood from human pancreatic cancer patient 4 processed by EpCAM CTC-Chip


text: live

text: Generic

text: circulating tumor cell (CTC)

text: IgG CTC-Chip

text: pancreatic cancer

text: pancreatic cancer patient 4

text: Homo sapiens

text: blood

text: blood from human pancreatic cancer patient 4 processed by IgG CTC-Chip


text: Ramaswamy, Center for Cancer Research, Massachusetts General Hospital

text: live

text: Generic

text: circulating tumor cell (CTC)

text: EpCAM CTC-Chip

text: pancreatic cancer

text: pancreatic cancer patient 6

text: Homo sapiens

text: blood

text: blood from human pancreatic cancer patient 6 processed by EpCAM CTC-Chip


text: live

text: Generic

text: circulating tumor cell (CTC)

text: IgG CTC-Chip

text: pancreatic cancer

text: pancreatic cancer patient 6

text: Homo sapiens

text: blood

text: blood from human pancreatic cancer patient 6 processed by IgG CTC-Chip


text: live

text: Generic

text: circulating tumor cell (CTC)

text: EpCAM CTC-Chip

text: pancreatic cancer

text: pancreatic cancer patient 7

text: Homo sapiens

text: blood

text: blood from human pancreatic cancer patient 7 processed by EpCAM CTC-Chip


text: live

text: Generic

text: circulating tumor cell (CTC)

text: IgG CTC-Chip

text: pancreatic cancer

text: pancreatic cancer patient 7

text: Homo sapiens

text: blood

text: blood from human pancreatic cancer patient 7 processed by IgG CTC-Chip


text: live

text: Generic

text: circulating tumor cell (CTC)

text: EpCAM CTC-Chip

text: pancreatic cancer

text: pancreatic cancer patient 9

text: Homo sapiens

text: blood

text: blood from human pancreatic cancer patient 9 processed by EpCAM CTC-Chip


text: live

text: Generic

text: circulating tumor cell (CTC)

text: IgG CTC-Chip

text: pancreatic cancer

text: pancreatic cancer patient 9

text: Homo sapiens

text: blood

text: blood from human pancreatic cancer patient 9 processed by IgG CTC-Chip


text: live

text: Generic

text: circulating tumor cell (CTC)

text: EpCAM CTC-Chip

text: pancreatic cancer

text: pancreatic cancer patient 11

text: Homo sapiens

text: blood

text: blood from human pancreatic cancer patient 11 processed by EpCAM CTC-Chip


text: live

text: Generic

text: circulating tumor cell (CTC)

text: IgG CTC-Chip

text: pancreatic cancer

text: pancreatic cancer patient 11

text: Homo sapiens

text: blood

text: blood from human pancreatic cancer patient 11 processed by IgG CTC-Chip


text: live

text: Generic

text: circulating tumor cell (CTC)

text: EpCAM CTC-Chip

text: pancreatic cancer

text: pancreatic cancer patient 12

text: Homo sapiens

text: pancreatic cancer patient, blood, EpCAM CTC-Chip

text: blood

text: blood from human pancreatic cancer patient 12 processed by EpCAM CTC-Chip


text: live

text: Generic

text: circulating tumor cell (CTC)

text: IgG CTC-Chip

text: pancreatic cancer

text: pancreatic cancer patient 12

text: Homo sapiens

text: pancreatic cancer patient, blood, IgG CTC-Chip

text: blood

text: blood from human pancreatic cancer patient 12 processed by IgG CTC-Chip


text: live

text: Generic

text: circulating tumor cell (CTC)

text: EpCAM CTC-Chip

text: pancreatic cancer

text: pancreatic cancer patient 16

text: Homo sapiens

text: blood

text: blood from human pancreatic cancer patient 16 processed by EpCAM CTC-Chip


text: live

text: Generic

text: circulating tumor cell (CTC)

text: IgG CTC-Chip

text: pancreatic cancer

text: pancreatic cancer patient 16

text: Homo sapiens

text: blood

text: blood from human pancreatic cancer patient 16 processed by IgG CTC-Chip


text: live

text: Generic

text: circulating tumor cell (CTC)

text: EpCAM CTC-Chip

text: pancreatic cancer

text: pancreatic cancer patient 18

text: Homo sapiens

text: blood

text: blood from human pancreatic cancer patient 18 processed by EpCAM CTC-Chip


text: live

text: Generic

text: circulating tumor cell (CTC)

text: IgG CTC-Chip

text: pancreatic cancer

text: pancreatic cancer patient 18

text: Homo sapiens

text: blood

text: blood from human pancreatic cancer patient 18 processed by IgG CTC-Chip


text: Ramaswamy, Center for Cancer Research, Massachusetts General Hospital

text: live

text: Generic

text: circulating tumor cell (CTC)

text: EpCAM CTC-Chip

text: pancreatic cancer

text: pancreatic cancer patient 19

text: Homo sapiens

text: blood

text: blood from human pancreatic cancer patient 19 processed by EpCAM CTC-Chip


text: live

text: Generic

text: circulating tumor cell (CTC)

text: IgG CTC-Chip

text: pancreatic cancer

text: pancreatic cancer patient 19

text: Homo sapiens

text: blood

text: blood from human pancreatic cancer patient 19 processed by IgG CTC-Chip


text: live

text: Generic

text: circulating tumor cell (CTC)

text: EpCAM CTC-Chip

text: pancreatic cancer

text: pancreatic cancer patient 20

text: Homo sapiens

text: blood

text: blood from human pancreatic cancer patient 20 processed by EpCAM CTC-Chip


text: live

text: Generic

text: circulating tumor cell (CTC)

text: IgG CTC-Chip

text: pancreatic cancer

text: pancreatic cancer patient 20

text: Homo sapiens

text: blood

text: blood from human pancreatic cancer patient 20 processed by IgG CTC-Chip


name: 1133219704033 Gregarina niphandrodes GNIPH-PE-ILI44-1 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Total DNA isolated from Gregarina niphandrodes

characteristic: description

text: cysts

characteristic: dev-stage

text: wild beetles

characteristic: isolation-source

text: Tenebrio molitor

characteristic: nat-host

text: Gregarina niphandrodes

text: Sample from Gregarina niphandrodes


name: 1133267709003 Hammondia hammondi HAMMONDIAHAMMONDI-P3KB-01-560 Sample

text: J. Craig Venter Institute

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Total DNA isolated from Hammondia hammondi

text: Hammondia hammondi

characteristic: organism

text: Sample from Hammondia hammondi


name: 1133274704005 Hammondia hammondi HAMMONDIA-RLB-RL099-01-775 Sample

characteristic: External Id

text: J. Craig Venter Institute

text: live

characteristic: INSDC status

text: Generic

characteristic: SRA accession

text: Hammondia hammondi

text: Sample from Hammondia hammondi

characteristic: title


name: 1133274704011 Hammondia hammondi HHAMMONDI-PE-ILI11-1 Sample

text: J. Craig Venter Institute

text: live

text: Generic

text: Hammondia hammondi

text: Sample from Hammondia hammondi


text: Computational Biology Section, Bioinformatics and Computational Biosciences Branch (BCBB), NIAID/NIH

text: live

text: Generic

characteristic: age

text: sperm

characteristic: cell type

text: Homo sapiens

text: Sperm Donor 1

text: Sperm Donor1 Bisulfite Sequencing


characteristic: INSDC center name

text: live

text: Generic

text: sperm

text: Homo sapiens

text: Sperm Donor 2

text: Sperm Donor2 Bisulfite Sequencing


Arctic deep marine sediment

text: IOCAS

text: live

text: MIMS.me

characteristic: NCBI submission model

text: marine abyssal

characteristic: biome

characteristic: collection date

characteristic: depth

text: Keywords: GSC:MIxS;MIMS:5.0

characteristic: env package

text: marine sediment

characteristic: feature

text: Arctic Ocean

characteristic: geo loc name

text: metagenome

characteristic: investigation type

characteristic: label

text: 90.0 N 180.0 E

characteristic: lat lon

text: sediment

characteristic: material

text: marine sediment metagenome

text: 16SrDNA sequence assembly from 454 sequencing

characteristic: project name

text: Environmental/Metagenome sample for Arctic deep marine sediment microorganism


Thermophilic cellulolytic sludge

characteristic: External Id

text: BGI

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIMS.me

text: MIGS/MIMS/MIMARKS.wastewater

characteristic: NCBI submission package

characteristic: SRA accession

text: sludge

text: 5 cm

text: Keywords: GSC:MIxS;MIMS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.wastewater

text: sludge

text: China: Hong Kong, Shek Wu Hui wastewater treatment plant

text: metagenome

text: anaerobic thermophilic cellulolytic sludge from lab reactor

characteristic: isolation-source

text: 22.3 N 114.1 E

text: Sludge

text: bioreactor sludge metagenome

characteristic: organism

text: Anaerobic thermophilic cellulolytic sludge Metagenome

text: MIMS Environmental/Metagenome sample from Clostridium thermocellum


characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

text: sperm

characteristic: cell type

text: mRNA directional

characteristic: library prep method

text: Homo sapiens

text: Sperm Donor 1, mRNA

text: Sperm Donor1 mRNA-seq

characteristic: title


text: live

text: Generic

text: sperm

text: mRNA directional

text: Homo sapiens

text: Sperm Donor 2, mRNA

text: Sperm Donor2 mRNA-seq


text: live

text: Generic

text: sperm

text: smRNA directional

text: Homo sapiens

text: Sperm Donor 1, smRNA

text: Sperm Donor1 smRNA-seq


text: live

text: Generic

text: sperm

text: smRNA directional

text: Homo sapiens

text: Sperm Donor 2, smRNA

text: Sperm Donor2 smRNA-seq


text: Genome Research Foundation

text: live

text: Generic

text: Homo sapiens


KATOIII

text: Genome Research Foundation

text: live

text: Generic

text: Homo sapiens

text: KATOIII


text: Swedish University of Agricultural Sciences

text: live

text: Generic

text: Fungal ITS coding DNA from a humus sample from a forest site in Abisko, isolated by chloroform precipitation and PCR amplification of the fungal ITS2 region

text: organismal metagenomes


text: live

text: Generic

text: Fungal ITS coding DNA from a humus sample from a forest site in Jadraas, Sweden, isolated by chloroform precipitation and PCR amplification of the fungal ITS2 region

text: organismal metagenomes


text: live

text: Generic

text: Fungal ITS coding DNA from a humus sample from a forest site in J*dra*s, Sweden, isolated by chloroform precipitation and PCR amplification of the fungal ITS2 region

text: organismal metagenomes


text: Stanley Nelson, Human Genetics, UCLA

text: live

text: Generic

text: Nf2Flox/Flox, NF2-/- in vitro induced with Ad-Cre

characteristic: genotype/variation

text: Mus musculus

text: ESC-FC1801 cultured cells

characteristic: sample type

text: mouse embryonic Schwann cells

characteristic: source cell type

text: ESC-FC1801_in vivo_control

text: FVB/N

characteristic: strain background

text: ESC-FC1801 In Vivo-Control

text: vehicle, three times a week, for 4 wks

characteristic: treated with


characteristic: External Id

text: Stanley Nelson, Human Genetics, UCLA

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Mus musculus

text: ESC-FC1801 cultured cells

text: mouse embryonic Schwann cells

text: ESC-FC1801_in vivo_NXD30001

text: FVB/N

text: ESC-FC1801 In Vivo-Treated

text: NXD30001 at 100mg/kg, three times a week, for 4 wks


text: Stanley Nelson, Human Genetics, UCLA

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Mus musculus

text: ESC-FC1801 cultured cells

text: mouse embryonic Schwann cells

text: ESC-FC1801_in vitro_control

text: FVB/N

text: ESC-FC1801 In Vitro-Control (MG1)

text: DMSO for 24 hours


text: Stanley Nelson, Human Genetics, UCLA

characteristic: INSDC center name

text: live

text: Generic

text: Mus musculus

characteristic: organism

text: ESC-FC1801 cultured cells

text: mouse embryonic Schwann cells

text: ESC-FC1801_in vitro_NXD30001

text: FVB/N

text: ESC-FC1801 In Vitro-Treated (MG2)

text: 1 uM NXD30001 for 24 hrs


Wild boar testis RNA-seq

text: Wageningen University

text: live

text: Generic

characteristic: NCBI submission model

text: Wild boar testis RNA-seq from one year old male, sampled at the Veluwe The Netherlands

characteristic: description

text: Sus scrofa

text: Wild boar testis RNA-seq


Pig placenta

text: Wageningen University

text: live

text: Generic

text: Pig placenta day 113 of pregnancy, RNA-seq, Duroc breed

text: Sus scrofa

text: Pig placenta day 113 of pregnancy RNA-seq

characteristic: title


Pool 11 tissue

text: Wageningen University

text: live

text: Generic

text: Pool of 11 pig tissues, ten tissues (colon, kidney, hypothalamus, spleen, small intestine, lymph node, liver, lung, frontal lobe, cerebellum) were obtained from a three year old Duroc (clone of TJ Tabasco), plus placenta sample from 113 days of pregnancy.

text: Sus scrofa

text: Pool of 11 pig tissue


text: Hogenesch, Pharmacology, UPenn

text: live

text: Generic

text: WT

characteristic: genotype

text: Mus musculus

text: Liver

characteristic: strain

characteristic: time

text: Liver

characteristic: tissue


text: Computational Biology Section, Bioinformatics and Computational Biosciences Branch (BCBB), NIAID/NIH

text: live

text: Generic

text: Active Motif

characteristic: antibody vendor

text: sperm

characteristic: cell type

characteristic: chip antibody

text: Homo sapiens

text: Sperm donor pool, H3K9me3 ChIP

text: Sperm Donor Pool H3K9me3 ChIP-seq, rep1


characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Active Motif

text: sperm

text: Homo sapiens

text: Sperm donor pool, H3K9me3 ChIP

text: Sperm Donor Pool H3K9me3 ChIP-seq, rep2


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission package

text: Abnova

text: sperm

text: Homo sapiens

text: Sperm donor pool, H3F3B ChIP

text: Sperm Donor Pool H3.3 ChIP-seq


characteristic: INSDC center name

text: live

text: Generic

characteristic: SRA accession

text: Abcam

text: sperm

text: Homo sapiens

characteristic: organism

text: Sperm donor pool, H3K36me3 ChIP

text: Sperm Donor Pool H3K36me3 ChIP-seq


text: live

text: Generic

characteristic: NCBI submission model

text: Abcam

text: sperm

text: Homo sapiens

text: Sperm donor pool, H3K4me1 ChIP

text: Sperm Donor Pool H3K4me1 ChIP-seq, rep1

characteristic: title


text: live

text: Generic

text: Abcam

text: sperm

text: Homo sapiens

text: Sperm donor pool, H3K4me1 ChIP

text: Sperm Donor Pool H3K4me1 ChIP-seq, rep2


text: live

text: Generic

text: Upstate

text: sperm

text: Homo sapiens

text: Sperm donor pool, H3K14ac ChIP

text: Sperm Donor Pool H3K14ac ChIP-seq, rep1


text: live

text: Generic

text: Upstate

text: sperm

text: Homo sapiens

text: Sperm donor pool, H3K14ac ChIP

text: Sperm Donor Pool H3K14ac ChIP-seq, rep2


text: live

text: Generic

text: Active Motif

text: sperm

text: Homo sapiens

text: Sperm donor pool, H3K27ac ChIP

text: Sperm Donor Pool H3K27ac ChIP-seq, rep1


text: live

text: Generic

text: Active Motif

text: sperm

text: Homo sapiens

text: Sperm donor pool, H3K27ac ChIP

text: Sperm Donor Pool H3K27ac ChIP-seq, rep2


text: University of Nebraska - Non Human Primate Genomics Center

text: live

text: Generic

text: RNA was extracted from untransformed stem cell lines derived from adipose stromal cells from the animal Clint, the reference chimpanzee (Pan troglodytes), in the laboratory of Dr. Rob Norgren. The cells lines were obtained from Coriell. Sequencing was performed at the University of Nebraska Medical Center.

characteristic: description

text: Pan troglodytes

text: Chimpanzee (Clint), Untransformed Stem Cell Line mRNA Seq


text: University of Montreal

text: live

text: Generic

text: CG-SH

characteristic: cell line

text: Homo sapiens

text: acute myeloid leukemia

text: CG-SH gDNA


text: University of Montreal

text: live

text: Generic

text: CG-SH

text: Homo sapiens

text: acute myeloid leukemia

text: CG-SH RNA


text: live

text: Generic

text: RNA was extracted from untransformed endothelial cell lines derived from smooth vascular muscle tissue from the animal Clint, the reference chimpanzee (Pan troglodytes), in the laboratory of Dr. Rob Norgren. The cells lines were obtained from Coriell. Sequencing was performed at the University of Nebraska Medical Center.

text: Pan troglodytes

text: Chimpanzee (Clint), Untransformed Endothelial Cell Line mRNA Seq


text: live

text: Generic

text: RNA was extracted from untransformed fibroblast cell lines derived from skin tissue from the animal Clint, the reference chimpanzee (Pan troglodytes), in the laboratory of Dr. Rob Norgren. The cells lines were obtained from Coriell. Sequencing was performed at the University of Nebraska Medical Center.

text: Pan troglodytes

text: Chimpanzee (Clint), Untransformed Fibroblast Cell Line mRNA Seq


text: School of Life Sciences, Sun Yat-sen University

text: live

text: Generic

text: mycelium cells

text: Aspergillus flavus

text: RNA from A. flavus cultured with PDB medium

characteristic: strain

text: PDB medium

characteristic: treatment


text: live

text: Generic

text: mycelium cells

characteristic: cell type

text: Aspergillus flavus

text: RNA from A. flavus cultured with PDB+5-AC medium

text: PDB+5-AC medium


text: live

text: Generic

text: mycelium cells

text: Aspergillus flavus

text: RNA from A. flavus cultured with PDB+GA medium

text: PDB+GA medium


text: live

text: Generic

text: RNA was extracted from untransformed myoblast cell lines derived from skeletal muscle tissue from the animal Clint, the reference chimpanzee (Pan troglodytes), in the laboratory of Dr. Rob Norgren. The cells lines were obtained from Coriell. Sequencing was performed at the University of Nebraska Medical Center.

text: Pan troglodytes

text: Chimpanzee (Clint), Untransformed Myoblast Cell Line mRNA Seq


text: John T. Lis, Moleular Biology and Genetics, Cornell University

text: live

text: Generic

text: anti-BrdU (Santa Cruz Biotech (sc-32323-AC))

characteristic: antibody

text: Schneider Line 2 (S2)

text: Drosophila melanogaster

text: embryonic

text: Circ-Ligase


characteristic: External Id

text: Boyce Thompson Institute

text: live

text: Generic

text: Autographa californica nucleopolyhedrovirus

text: AcMNPV infected Tnms42 cells at 0 hour post infection


text: Boyce Thompson Institute

characteristic: INSDC first public

text: live

text: Generic

text: AcMNPV infected Tnms42 cells at 6 hour post infection


text: Boyce Thompson Institute

characteristic: INSDC last update

text: live

text: Generic

text: AcMNPV infected Tnms42 cells at 12 hour post infection


text: Boyce Thompson Institute

characteristic: INSDC secondary accession

text: live

text: Generic

text: AcMNPV infected Tnms42 cells at 18 hour post infection


text: Boyce Thompson Institute

text: live

characteristic: INSDC status

text: Generic

text: AcMNPV infected Tnms42 cells at 24 hour post infection


text: Gregory Lab, Department of Biology, University of Pennsylvania

text: live

text: Generic

characteristic: NCBI submission package

text: Arabidopsis thaliana

text: immature flower bud clusters

text: immature flower bud clusters

characteristic: tissue

text: col-0 ssRNA-seq


characteristic: INSDC center name

text: live

text: Generic

characteristic: SRA accession

text: Arabidopsis thaliana

text: immature flower bud clusters

text: immature flower bud clusters

text: col-0 ribo-seq


text: Boyce Thompson Institute

text: live

text: Generic

characteristic: NCBI submission model

characteristic: organism

text: AcMNPV infected Tnms42 cells at 36 hour post infection


text: Boyce Thompson Institute

text: live

text: Generic

text: AcMNPV infected Tnms42 cells at 48 hour post infection

characteristic: title


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: DS-BMF

text: SNP Genotypes (NGS)

characteristic: molecular data type

text: Homo sapiens

text: male

characteristic: sex

text: Mendelian

characteristic: study design

text: Anemia, Dyserythropoietic, Congenital

characteristic: study disease

characteristic: study name

text: Yes

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: DNA sample from a human male participant in the dbGaP study Biology and Molecular Analysis of Human Hematopoiesis Genetics


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission package

text: DNA

text: DS-BMF

text: SNP Genotypes (NGS)

text: Homo sapiens

text: female

text: Mendelian

text: Anemia, Dyserythropoietic, Congenital

text: Yes

text: DNA sample from a human female participant in the dbGaP study Biology and Molecular Analysis of Human Hematopoiesis Genetics


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: DS-BMF

text: SNP Genotypes (NGS)

text: Homo sapiens

characteristic: organism

text: female

text: Mendelian

text: Anemia, Dyserythropoietic, Congenital

text: Biology and Molecular Analysis of Human Hematopoiesis Genetics

text: Yes

characteristic: title


text: dbGaP

text: live

text: Generic

text: DNA

text: DS-BMF

text: SNP Genotypes (NGS)

characteristic: molecular data type

text: Homo sapiens

text: male

characteristic: sex

text: Mendelian

characteristic: study design

text: Anemia, Dyserythropoietic, Congenital

characteristic: study disease

characteristic: study name

text: Yes

characteristic: subject is affected

characteristic: submitted sample id


characteristic: External Id

text: Kyungpook National University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Cheongcheong

characteristic: cultivar

text: 3-4 leaf stage

characteristic: dev-stage

text: Oryza sativa

text: young leaf

characteristic: tissue-type

text: Oryza sativa cv. Cheongcheong young leaf cDNA library

text: pGEM-T-easy vector

characteristic: vector


text: Kyungpook National University

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Nakdong

text: 3-4 leaf stage

text: Oryza sativa Japonica Group

characteristic: organism

text: young leaf

text: Oryza sativa Japonica Group cv. Nakdong young leaf cDNA library

text: pGEM-T-easy vector


text: Jiangsu University

text: live

text: Generic

characteristic: collection date

text: 1937.5 m

characteristic: depth

text: Pacific Ocean: South China Sea

characteristic: geo loc name

text: 17.99875 N 111.387383 E

characteristic: lat lon

text: marine sediment metagenome

text: Generic sample from marine sediment metagenome

characteristic: title


characteristic: External Id

text: Jiangsu University

text: live

text: Generic

text: 2026.6 m

text: Pacific Ocean: South China Sea

text: 17.9821167 N 111.490933 E

text: marine sediment metagenome


text: Jiangsu University

characteristic: INSDC center name

text: live

text: Generic

text: 2448.3 m

text: Pacific Ocean: South China Sea

text: 18.0090167 N 112.1354 E

text: marine sediment metagenome


text: Jiangsu University

characteristic: INSDC first public

text: live

text: Generic

text: 3563 m

text: Pacific Ocean: South China Sea

text: 18.0306833 N 114.50525 E

text: marine sediment metagenome


text: Jiangsu University

characteristic: INSDC last update

text: live

text: Generic

text: 3938 m

text: Pacific Ocean: South China Sea

text: 18.0123667 N 117.04855 E

text: marine sediment metagenome


text: Jiangsu University

text: live

text: Generic

text: 3023 m

text: Pacific Ocean: South China Sea

text: 18.0352333 N 119.532483 E

text: marine sediment metagenome


text: Jiangsu University

text: live

text: Generic

text: 3415 m

text: Pacific Ocean: South China Sea

text: 18.743433 N 119.7377167 E

text: marine sediment metagenome


text: Jiangsu University

text: live

text: Generic

text: 3536 m

text: Pacific Ocean: South China Sea

text: 20.0495167 N 120.004167 E

text: marine sediment metagenome


text: Jiangsu University

text: live

text: Generic

text: 2918 m

text: Pacific Ocean: South China Sea

text: 19.6928167 N 119.3316 E

text: marine sediment metagenome


text: Jiangsu University

text: live

text: Generic

text: 652 m

text: Pacific Ocean: South China Sea

text: 21.3867 N 117.620133 E

text: marine sediment metagenome


text: Jiangsu University

text: live

text: Generic

text: 35 m

text: Pacific Ocean: South China Sea

text: 22.48925 N 116.503367 E

text: marine sediment metagenome


text: Jiangsu University

text: live

text: Generic

text: 431 m

text: Pacific Ocean: South China Sea

text: 20.6362667 N 116.3807 E

text: marine sediment metagenome


text: Jiangsu University

text: live

text: Generic

text: 717 m

text: Pacific Ocean: South China Sea

text: 20.23515 N 116.7280167 E

text: marine sediment metagenome


text: Jiangsu University

text: live

text: Generic

text: 3739 m

text: Pacific Ocean: South China Sea

text: 19.0061333 N 117.97055 E

text: marine sediment metagenome


text: Jiangsu University

text: live

text: Generic

text: 1808 m

text: Pacific Ocean: South China Sea

text: 19.7067833 N 115.2978 E

text: marine sediment metagenome


text: Jiangsu University

text: live

text: Generic

text: 300 m

text: Pacific Ocean: South China Sea

text: 18.22165 N 109.4769 E

text: marine sediment metagenome


text: JCVI

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: Samonella enterica strain 14028

characteristic: infection

text: Mus musculus

text: RNA extracted from FACS sorted B cells infected with S. enterica 14028

text: spleen

characteristic: tissue

text: S. enterica transcriptome analysis in mouse B cells FACS sorted from the spleen


T.mairei leaves

text: Dalian Jiaotong University

text: live

characteristic: INSDC status

text: Generic

text: Total RNA was extracted from the fresh leaves of pot-cultivated Taxus mairei using Trizol (Invitrogen). The samples were then subjected to 15% denaturing polyacrylamide gel electrophoresis (PAGE), after which the small RNA fragments of 18-30 nt were isolated from the gel and purified.

characteristic: description

text: Taxus mairei

text: Identification of Taxus microRNAs with high-throughput sequencing


T.mairei leaves 2

text: Dalian Jiaotong University

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Taxus mairei

text: Identification of Taxus microRNAs and their targets with high-throughput sequencing and degradome analysis


text: INRA

text: live

text: Generic

text: Sus scrofa

characteristic: organism

text: Porcine alveolar macrophages transcriptome


text: Normal

characteristic: Cognitive

text: ND

characteristic: Demented

text: partial

characteristic: DentureLow

characteristic: Gingivitis

characteristic: GingivitisOlson

text: West Virginia University

text: live

text: normal

characteristic: Impaired

text: MIMS.me

text: MIGS/MIMS/MIMARKS.human-oral

characteristic: NoSites

characteristic: RootCaries

text: human subgingiva

characteristic: biome

characteristic: crown

characteristic: depth

text: Keywords: GSC:MIxS;MIMS:5.0

text: MIGS/MIMS/MIMARKS.human-oral

characteristic: env package

characteristic: filled

characteristic: host age

text: male

characteristic: host sex

characteristic: host subject id

text: Sub-gingiva

text: white

text: metagenome

characteristic: investigation type

text: plaque

characteristic: material

characteristic: missing

text: uncultured bacterium

characteristic: pocketdepth

text: oral microbiome

characteristic: project name

characteristic: sound

text: Homo sapiens

characteristic: specific host

characteristic: teeth

text: MIMS Environmental/Metagenome sample from Bacteria


text: Normal

characteristic: Cognitive

characteristic: CoronalCaries

text: ND

characteristic: Demented

text: full

characteristic: DentureLow

characteristic: External Id

characteristic: Gingivitis

characteristic: GingivitisOlson

text: West Virginia University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: normal

characteristic: Impaired

text: MIMS.me

characteristic: NCBI submission model

text: MIGS/MIMS/MIMARKS.human-oral

characteristic: NCBI submission package

characteristic: NoSites

characteristic: RootCaries

characteristic: SRA accession

text: human subgingiva

characteristic: decayed

text: Keywords: GSC:MIxS;MIMS:5.0

characteristic: description

text: MIGS/MIMS/MIMARKS.human-oral

text: female

text: Sub-gingiva

text: white

text: metagenome

text: plaque

text: uncultured bacterium

characteristic: organism

text: oral microbiome

text: Homo sapiens

characteristic: title


text: CIND

characteristic: Cognitive

text: ND

characteristic: Demented

characteristic: External Id

text: West Virginia University

text: live

text: Impaired

text: MIMS.me

text: MIGS/MIMS/MIMARKS.human-oral

characteristic: PlaqueIndex

text: human subgingiva

characteristic: biome

characteristic: depth

text: Keywords: GSC:MIxS;MIMS:5.0

text: MIGS/MIMS/MIMARKS.human-oral

characteristic: env package

characteristic: host age

text: male

characteristic: host sex

characteristic: host subject id

text: Sub-gingiva

text: white

text: metagenome

characteristic: investigation type

text: plaque

characteristic: material

text: uncultured bacterium

text: oral microbiome

characteristic: project name

text: Homo sapiens

characteristic: specific host

characteristic: teeth