Ring

text: NIH

text: live

text: Generic

text: Plasmodium falciparum 3D7

text: P. falciparum ring-stage (R)


early trophozoite

status: PUBLIC

characteristic: External Id

text: NIH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Plasmodium falciparum 3D7

characteristic: organism

text: P. falciparum early trophozoite stage (ET)

characteristic: title


late trophozoite

text: NIH

text: live

text: Generic

text: Plasmodium falciparum 3D7

text: P. falciparum late trophozoite stage (LT)


text: Buell Lab, Dept. of Plant Biology, Michigan State University

text: live

text: Generic

text: Pseudoperonospora cubensis

text: Pseudoperonospora cubensis infection on Cucumis sativus, one day after inoculation, replicate 1


text: Institute for Genome Sciences University of MD School of Medicine

text: live

text: Generic

text: Escherichia coli PA22

tag: attribute

characteristic: strain

text: Escherichia coli PA22


text: Stanford University

text: live

text: Generic

characteristic: cell type

text: Homo sapiens

text: CD19+ cells

text: blood

characteristic: tissue


text: Stanford University

text: live

text: Generic

text: Homo sapiens

text: CD34+ cells

text: blood


text: Stanford University

text: live

text: Generic

text: neutrophils

text: Homo sapiens

text: Neutrophils

text: blood

text: neutrophils


schizont

text: NIH

text: live

text: Generic

text: Plasmodium falciparum 3D7

text: P. falciparum schizont


GII

text: NIH

text: live

text: Generic

text: Plasmodium falciparum 3D7

text: P. falciparum gametocytes stage (GII)


text: MMG, OHSU

text: live

text: Generic

characteristic: cell line

text: normal breast epithlial

text: Homo sapiens

text: GFP-expressing

characteristic: phenotype

text: MCF10A-Myc cells

text: MycPlusGFP


text: MMG, OHSU

text: live

text: Generic

text: normal breast epithlial

text: Homo sapiens

text: MCF10A-Myc cells


GV

text: NIH

text: live

text: Generic

text: Plasmodium falciparum 3D7

text: P. falciparum gametocytes V stage (GV)


ookinete

text: NIH

text: live

text: Generic

text: Plasmodium falciparum 3D7

text: P. falciparum ookinete stage (Oo)


VL_454 Transcriptome paper MBE

text: University of South Florida

text: live

text: Generic

text: Vaucheria litorea transcriptome 454 raw sequence reads derived from whole algal filaments

characteristic: description

text: Vaucheria litorea

text: Vaucheria litorea 454 transcriptome reads matching to chloroplast and genomic sequences


name: EC_Illiumina reads for transcriptome paper MBE

characteristic: External Id

text: University of South Florida

text: live

text: Generic

text: Elysia chlorotica Illumina transcripts derived from adult animals

text: Elysia chlorotica

text: E. chlorotica raw Illumina reads matching to V. litorea nuclear-encoded sequences


text: National Institute Of Biological Sciences, Beijing (NIBS)

characteristic: INSDC center name

text: live

text: Generic

text: ES cells

characteristic: hmedip

text: Mus musculus

text: R1 ES cells

characteristic: stage or passages


characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: fibroblast cells

text: Mus musculus

text: TSKM-iPS mouse derived fibroblast cells

text: p4 supply with doxycycline for 3 days

text: OSKM 2nd 1#-3D


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: fibroblast cells

text: Mus musculus

text: OSKM-iPS mouse derived fibroblast cells

text: p4 supply with doxycycline for 4 days

text: TSKM 2nd 2#-3D


text: live

text: Generic

characteristic: SRA accession

text: iPS cells

text: Mus musculus

characteristic: organism

text: oct4 tet1 inducted iPS cells

text: OT-iPS

characteristic: title


text: live

text: Generic

text: iPS cells

characteristic: cell type

text: Mus musculus

text: tet1 sox2 klf4 and c-Myc inducted iPS cells

characteristic: strain

text: TSKM-iPS


D. miranda MSH22 virgin female

text: University of California, Berkeley

text: live

text: Generic

text: Female virgin flies were collected from a D. miranda strain MSH22 which has been inbred for 5 generations

text: Drosophila miranda

text: D. miranda MSH22 female


text: Sharp, Biology, MIT

text: live

text: Generic

text: Drosophila melanogaster

text: dissected whole brains

text: 1-7d adult

characteristic: stage

text: yw; OK107-Gal4,mCD8GFP

text: whole brains

characteristic: tissue

text: brain


characteristic: External Id

text: Sharp, Biology, MIT

text: live

text: Generic

text: Drosophila melanogaster

text: dissected mushroom bodies

text: 1-7d adult

text: yw; OK107-Gal4,mCD8GFP

text: mushroom bodies


text: Sharp, Biology, MIT

characteristic: INSDC center name

text: live

text: Generic

text: Drosophila melanogaster

text: dissected testis

text: 1-7d adult

text: yw; OK107-Gal4,mCD8GFP

text: testis


text: NCI

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: Metastatic Neuroblastoma

characteristic: description

text: Homo sapiens

text: Metastatic Neuroblastoma 1

characteristic: sample name

characteristic: subject id

text: Homo sapiens Metastatic Neuroblastoma


text: NCI

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Generic

text: Primary Neuroblastoma

text: Homo sapiens

text: Homo sapiens Primary Neuroblastoma Tumor


text: NCI

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Generic

text: Metastatic Neuroblastoma

text: Homo sapiens

text: Metastatic Neuroblastoma II

text: Homo sapiens Metastatic Neuroblastoma Tumor II


text: NCI

text: live

text: Generic

characteristic: SRA accession

text: Generic

text: Gemline From Skin of NB1005

text: Homo sapiens

characteristic: organism

text: Gemline From Skin of NB1005

text: Homo sapiens Germline From Skin of Neuroblastoma patient

characteristic: title


text: NCI

text: live

text: Generic

text: Generic

text: Gemline From Liver of NB1005

text: Homo sapiens

text: Gemline From Liver of NB1005

text: Homo sapiens Germline From Liver of Neuroblastoma patient


text: Molecular Biology, Sloan-Kettering Institute

text: live

text: Generic

text: Asynchronous culture

characteristic: cell cycle stage

text: Saccharomyces cerevisiae

text: WT [yIW160]

characteristic: strain


characteristic: External Id

text: live

text: Generic

text: Asynchronous culture

text: Saccharomyces cerevisiae

text: pol32ko [yIW174]


characteristic: INSDC center name

text: live

text: Generic

text: Pseudoperonospora cubensis

text: Pseudoperonospora cubensis infection on Cucumis sativus, two days after inoculation, replicate 1


text: live

text: Generic

text: Pseudoperonospora cubensis

text: Pseudoperonospora cubensis infection on Cucumis sativus, three days after inoculation, replicate 1


text: Buell Lab, Dept. of Plant Biology, Michigan State University

text: live

text: Generic

text: Pseudoperonospora cubensis

text: Pseudoperonospora cubensis infection on Cucumis sativus, four days after inoculation, replicate 1


text: live

text: Generic

text: Pseudoperonospora cubensis

text: Pseudoperonospora cubensis infection on Cucumis sativus, six days after inoculation, replicate 1


text: live

text: Generic

text: Pseudoperonospora cubensis

text: Pseudoperonospora cubensis infection on Cucumis sativus, eight days after inoculation, replicate 1


text: live

text: Generic

text: Pseudoperonospora cubensis

text: Pseudoperonospora cubensis infection on Cucumis sativus, one day after inoculation, replicate 2


text: live

text: Generic

text: Pseudoperonospora cubensis

text: Pseudoperonospora cubensis infection on Cucumis sativus, two days after inoculation, replicate 2


text: live

text: Generic

text: Pseudoperonospora cubensis

text: Pseudoperonospora cubensis infection on Cucumis sativus, three days after inoculation, replicate 2


text: live

text: Generic

text: Pseudoperonospora cubensis

text: Pseudoperonospora cubensis infection on Cucumis sativus, four days after inoculation, replicate 2


text: live

text: Generic

text: Pseudoperonospora cubensis

text: Pseudoperonospora cubensis infection on Cucumis sativus, six days after inoculation, replicate 2


text: live

text: Generic

text: Pseudoperonospora cubensis

text: Pseudoperonospora cubensis infection on Cucumis sativus, eight days after inoculation, replicate 2


text: live

text: Generic

text: Cucumis sativus

text: Cucumis sativus, one day after mock inoculation


text: Rajewsky, Systems Biology of Gene Regulatory Elements, Max-Delbrueck Centrum Berlin-Buch

text: live

text: Generic

text: mouse embryonic fibroblasts (MEF)

characteristic: cell type

characteristic: chip antibody

characteristic: developmental stage

text: wild type

characteristic: genotype/variation

text: Mus musculus

text: MEF

text: WT E2F3


characteristic: INSDC first public

text: live

text: Generic

text: mouse embryonic fibroblasts (MEF)

text: Mus musculus

text: MEF

text: KO E2F3


characteristic: INSDC last update

text: live

text: Generic

text: mouse embryonic fibroblasts (MEF)

text: HELLS

text: wild type

text: Mus musculus

text: MEF

text: WT HELLS


characteristic: INSDC secondary accession

text: live

text: Generic

text: mouse embryonic fibroblasts (MEF)

text: HELLS

text: Mus musculus

text: MEF

text: KO HELLS


text: live

characteristic: INSDC status

text: Generic

text: mouse embryonic fibroblasts (MEF)

text: IgG

text: wild type

text: Mus musculus

text: MEF

text: WT IgG


text: live

text: Generic

characteristic: NCBI submission model

text: mouse embryonic fibroblasts (MEF)

text: IgG

text: Mus musculus

text: MEF

text: KO IgG


text: live

text: Generic

characteristic: NCBI submission package

text: mouse embryonic fibroblasts (MEF)

text: wild type

text: Mus musculus

text: MEF

text: WT H3K27me3


text: live

text: Generic

characteristic: SRA accession

text: mouse embryonic fibroblasts (MEF)

text: Mus musculus

text: MEF

text: KO H3K27me3


D. miranda MSH22 testis

text: University of California, Berkeley

text: live

text: Generic

text: Testes were dissected from about 50 vigin males of D. miranda MSH22 strain 5 days after their enclosure.

characteristic: description

text: Drosophila miranda

characteristic: organism

text: D. miranda MSH22 virgin testis


D. miranda male accessory gland

text: University of California, Berkeley

text: live

text: Generic

text: Accessory glands were dissected from about 50 virgin males of D. miranda MSH22 5 days after enclosure.

text: Drosophila miranda

text: D. miranda MSH22 male virgin accessory gland

characteristic: title


D. miranda ovary

text: University of California, Berkeley

text: live

text: Generic

text: Ovaries were dissected from about 50 female virgins of D.miranda MSH22 strain 5 days after enclosure.

text: Drosophila miranda

text: Drosophila miranda MSH22 virgin ovary


D. miranda male carcass

text: University of California, Berkeley

text: live

text: Generic

text: D. miranda MSH22 virgin male bodies with testes and accessory glands removed.

text: Drosophila miranda

text: D. miranda MSH22 male body carcass


D. miranda female carcass

text: University of California, Berkeley

text: live

text: Generic

text: Drosophila miranda MSH22 female virgin bodies with ovaries removed.

text: Drosophila miranda

text: D. miranda MSH22 female virgin body carcass


D. miranda MSH22 virgin whole male RNA

text: University of California, Berkeley

text: live

text: Generic

text: mRNA extracted from male virgins flies of D. miranda MSH22 strain

text: Drosophila miranda

text: D. miranda MSH22 virgin whole male


D. miranda MSH22 virgin female mRNA

text: University of California, Berkeley

text: live

text: Generic

text: mRNA extracted from female virgin flies of D. miranda MSH22 strain

text: Drosophila miranda

text: D. miranda MSH22 virgin whole female


PRJNA38063.Escherichia coli B799

text: Broad Institute

text: live

text: Generic

characteristic: bi gssr sample id

text: broadinstitute.org:bsp.prod.sample:282CZ

characteristic: bi gssr sample lsid

text: Genomic DNA

characteristic: bi gssr sample type

text: Generic

characteristic: biosamplemodel

text: Escherichia coli B799

text: Escherichia coli B799

characteristic: sample id

characteristic: strain

text: E. coli B799 Genomic DNA sample 126557.0


name: 191982.5087.Genomic DNA.MG1655 No chl LW1

characteristic: External Id

text: Broad Institute

characteristic: INSDC center name

text: live

text: Generic

text: Generic

text: Escherichia coli

text: MG1655 No chl LW1

text: Genomic DNA

characteristic: sample type

text: Other

characteristic: sex

text: E. coli MG1655 Genomic DNA sample MG1655 No chl LW1


text: igenomic

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: normal

characteristic: disease status

text: Homo sapiens

text: Colon tissue,normal

text: Colon tissue

characteristic: tissue

text: Colon tissue from human s1,normal


text: igenomic

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: paracancerous

text: Homo sapiens

characteristic: organism

text: Colon tissue,paracancerous

text: Colon tissue

text: Colon tissue from human s2,paracancerous

characteristic: title


text: igenomic

text: live

text: Generic

text: cancerous

text: Homo sapiens

text: Colon tissue,cancerous

text: Colon tissue

text: Colon tissue from human s3,cancerous


IoNA

text: CSTB

text: live

text: Generic

text: Core species of three indoor air belong to human microenvironment not to outdoor air

characteristic: description

text: uncultured bacterium

text: air metagenome : indoor air belong to human microenvironment not to outdoor air


Lophelia pertusa

text: University of Nordland

text: live

text: Generic

text: A live L. pertusa specimen sample (isolate NL-1) was collected at Nord-Leksa, Norway, immediately preserved in liquid nitrogen until DNA extraction. Approximately five coral polyps with corallites were crushed with a mortar and pestle and digested using Tissue Lysis buffer and proteinase K, before standard protocol of the High Pure PCR Template Preparation Kit from Roche were followed. The DNA was extracted by phenol/chloroform and diluted in water. The sample was shipped to Eurofins MWG Operon for 454 fragment sequencing.

text: Desmophyllum pertusum

text: 454 Fragment sequencing of Lophelia pertusa genome


text: Institute for Genome Sciences University of MD School of Medicine

text: live

text: Generic

text: Escherichia coli PA40

characteristic: strain

text: Escherichia coli PA40


WT

characteristic: External Id

text: Case Western Reserve University

text: live

text: Generic

text: Saccharomyces cerevisiae S288C

text: WT


text: Case Western Reserve University

characteristic: INSDC center name

text: live

text: Generic

text: Saccharomyces cerevisiae S288C


text: Buell Lab, Dept. of Plant Biology, Michigan State University

text: live

text: Generic

text: Pseudoperonospora cubensis

text: Pseudoperonospora cubensis sporangia


text: Molecular Biology, MGH

text: live

text: Generic

text: S2 cells

characteristic: cell type

text: biotin-eluted

characteristic: elution strategy

text: Drosophila melanogaster

text: roX2 CHART

characteristic: sample type

text: S2 cells

text: roX2 CHART biotin eluted


text: Molecular Biology, MGH

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: S2 cells

text: Drosophila melanogaster

text: sense control

text: S2 cells

text: Sense control CHART


text: Molecular Biology, MGH

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: S2 cells

text: Rnase-eluted

text: Drosophila melanogaster

text: roX2 CHART

text: S2 cells

text: roX2 CHART RNase eluted rep 1


text: Molecular Biology, MGH

text: live

text: Generic

text: S2 cells

text: Rnase-eluted

text: Drosophila melanogaster

text: roX2 CHART

text: S2 cells

text: roX2 CHART RNase eluted rep 2


text: Molecular Biology, MGH

text: live

text: Generic

text: S2 cells

text: Drosophila melanogaster

text: input control

text: S2 cells

text: S2 input control


text: INRA

text: live

text: Generic

text: mRNA from mycorrhizal and nematode inoculated Vitis roots, was substracted with a mixture of mRNA noninoculated roots, Xiphenema index inoculated roots and roots inoculated with Glomus intraradices BEG141.

text: Roots

characteristic: organ

text: Vitis berlandieri x V. riparia/Xiphinema index/Glomus intraradices EST library

text: Mycorrhizal Vitis and Xiphinema index substractive suppressive library


text: Heilongjiang Bayi Agricultural University

text: live

text: Generic

characteristic: NCBI submission model

text: Zi goose

characteristic: breed

text: A full-length cDNA library from the ovaries of egg-laying performance

text: adult

characteristic: dev-stage

text: Anser anser

text: female

characteristic: sex

text: ovary

characteristic: tissue-type

text: Geese ovary full-length cDNA library


text: University of Sao Paulo

text: live

text: Generic

characteristic: NCBI submission package

text: The library of 520 insertional mutants was obtained via Agrobacterium-mediated transformation system. The transformation binary vector contains the hygromycin phosphotransferase gene (hph) from Escherichia coli driven by the Aspergillus nidulans glyceraldehyde-3-phosphate dehydrogenase gene (gpd) promoter and the tryptophan C gene (trpC) transcription-termination signal. Endophytic fungi from mangrove.

characteristic: description

text: Diaporthe phaseolorum

characteristic: organism

text: Diaporthe sp. transformant library

characteristic: title


characteristic: External Id

text: Reymond, CIG, UNIL

characteristic: INSDC center name

text: live

text: Generic

characteristic: SRA accession

characteristic: cell line id

text: Lymphoblastoid cells

characteristic: cell type

text: H4K20me1 [Abcam ab9051]

characteristic: chip antibody

text: Homo sapiens

text: EBV transformed mononuclear cells from perypherial blood


text: Reymond, CIG, UNIL

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: AUBLA

text: Lymphoblastoid cells

text: H4K20me1 [Abcam ab9051]

text: Homo sapiens


text: Reymond, CIG, UNIL

text: live

text: Generic

characteristic: NCBI submission model

text: Lymphoblastoid cells

text: H3K27me3 [Millipore 07-449]

text: Homo sapiens


text: Reymond, CIG, UNIL

text: live

text: Generic

text: AUBLA

text: Lymphoblastoid cells

text: H3K27me3 [Millipore 07-449]

text: Homo sapiens


text: School of Life Sciences, Sun Yat-sen University

text: live

text: Generic

text: Danio rerio

text: embryo at 4 hpf


CF1_D Microbial Metagenomic Studies

text: San Diego State University

text: live

text: Generic

text: Sputum sample collected from Cystic Fibrosis individual.

text: Homo sapiens

text: CF1_D Microbial Metagenomic Studies


CF1_E Microbial Metagenomic Studies

text: San Diego State University

text: live

text: Generic

text: Sputum sample was collected from Cystic Fibrosis individual.

text: Homo sapiens

text: CF1_E Microbial Metagenomic Studies


CF1_F Microbial Metagenomic Studies

text: San Diego State University

text: live

text: Generic

text: Homo sapiens

text: CF1_F Microbial Metagenomic Studies


TA2 Microbial Metagenomic Studies

text: San Diego State University

text: live

text: Generic

text: Sputum sample was collected from Cystic Fibrosis individual. Sample was named TA2 and CF4-B was used for publication (Lim et al. 2011).

text: Homo sapiens

text: CF4-B Microbial Metagenomic Studies


text: Texas A&M University

text: live

text: Generic

text: 16S rRNA gene pyro-tags from a bio-screen using -20 deg C with no glycerol stored inoculum originally derived from a bio-reactor using Great Salt Plains, Oklahoma as original sediment inoculum

text: bioreactor metagenome

text: Comparison of storage inoculum to reproduce original bio-screen bacterial communities


text: Texas A&M University

text: live

text: Generic

text: 16S rRNA gene pyro-tags from a bio-screen using -20 deg C with 20% glycerol stored inoculum originally derived from a bio-reactor using Great Salt Plains, Oklahoma as original sediment inoculum

text: bioreactor metagenome


text: Texas A&M University

text: live

text: Generic

text: 16S rRNA gene pyro-tags from a bio-screen using lyophilized stored inoculum originally derived from a bio-reactor using Great Salt Plains, Oklahoma as original sediment inoculum

text: bioreactor metagenome


text: Texas A&M University

text: live

text: Generic

text: 16S rRNA gene pyro-tags from a bio-screen using 4 deg C stored inoculum originally derived from a bio-reactor using Great Salt Plains, Oklahoma as original sediment inoculum

text: bioreactor metagenome


text: Texas A&M University

text: live

text: Generic

text: 16S rRNA gene pyro-tags from a bio-screen using -20 deg C with no glycerol stored inoculum originally derived from a bio-reactor using Brazoria NWR, Texas as original sediment inoculum

text: bioreactor metagenome


text: Texas A&M University

text: live

text: Generic

text: 16S rRNA gene pyro-tags from a bio-screen using -20 deg C with 20% glycerol stored inoculum originally derived from a bio-reactor using Brazoria NWR, Texas as original sediment inoculum

text: bioreactor metagenome


text: Texas A&M University

text: live

text: Generic

text: 16S rRNA gene pyro-tags from a bio-screen using lyophilized stored inoculum originally derived from a bio-reactor using Brazoria NWR, Texas as original sediment inoculum

text: bioreactor metagenome


text: Texas A&M University

text: live

text: Generic

text: 16S rRNA gene pyro-tags from a bio-screen using 4 deg C stored inoculum originally derived from a bio-reactor using Brazoria NWR, Texas as original sediment inoculum

text: bioreactor metagenome


text: Texas A&M University

text: live

text: Generic

text: 16S rRNA gene pyro-tags from a bio-screen using -20 deg C with no glycerol stored inoculum originally derived from a bio-reactor using Bitter Lake, New Mexico as original sediment inoculum

text: bioreactor metagenome


text: Texas A&M University

text: live

text: Generic

text: 16S rRNA gene pyro-tags from a bio-screen using -20 deg C with 20% glycerol stored inoculum originally derived from a bio-reactor using Bitter Lake, New Mexico as original sediment inoculum

text: bioreactor metagenome


Exosome miRNA

text: The University of Melbourne

text: live

text: Generic

characteristic: cell line

text: Mouse Hypothalamic Neuronal Cells

text: Mus musculus

text: Mouse prion infected Hypothalamic Neuronal Cells


text: Texas A&M University

text: live

text: Generic

text: 16S rRNA gene pyro-tags from a bio-screen using lyophilized stored inoculum originally derived from a bio-reactor using Bitter Lake, New Mexico as original sediment inoculum

text: bioreactor metagenome


text: Texas A&M University

text: live

text: Generic

text: 16S rRNA gene pyro-tags from a bio-screen using 4 deg C stored inoculum originally derived from a bio-reactor using Bitter Lake, New Mexico as original sediment inoculum

text: bioreactor metagenome


text: Texas A&M University

text: live

text: Generic

text: 16S rRNA gene pyro-tags from a bio-screen using -20 deg C with no glycerol stored inoculum originally derived from a bio-reactor using San Francisco Bay NWR, California as original sediment inoculum

text: bioreactor metagenome


text: Texas A&M University

text: live

text: Generic

text: 16S rRNA gene pyro-tags from a bio-screen using -20 deg C with 20% glycerol stored inoculum originally derived from a bio-reactor using San Francisco Bay NWR, California as original sediment inoculum

text: bioreactor metagenome


text: Texas A&M University

text: live

text: Generic

text: 16S rRNA gene pyro-tags from a bio-screen using lyophilized stored inoculum originally derived from a bio-reactor using San Francisco Bay NWR, California as original sediment inoculum

text: bioreactor metagenome


text: Texas A&M University

text: live

text: Generic

text: 16S rRNA gene pyro-tags from a bio-screen using 4 deg C stored inoculum originally derived from a bio-reactor using San Francisco Bay NWR, California as original sediment inoculum

text: bioreactor metagenome


text: Texas A&M University

text: live

text: Generic

text: 16S rRNA gene pyrotags of the carboxylate platform laboratory screen collected at day 30 operated with paper at 55 deg C inoculated with sediment from Brazoria 2 collected February 2009, Brazoria National Wildlife Refuge, Texas

text: bioreactor metagenome

text: Analysis of fermentation bacterial communities derived from Brazoria NWR sediment innocula


text: Texas A&M University

text: live

text: Generic

text: 16S rRNA gene pyrotags of the carboxylate platform laboratory screen collected at day 30 operated with paper at 55 deg C inoculated with sediment from Brazoria 5 collected February 2009, Brazoria National Wildlife Refuge, Texas

text: bioreactor metagenome


Amelonado

text: University of British Columbia

text: live

text: Generic

text: Theobroma cacao

text: T. cacao var. Amelonado


text: Texas A&M University

text: live

text: Generic

text: 16S rRNA gene pyrotags of the carboxylate platform laboratory screen collected at day 30 operated with paper at 55 deg C inoculated with sediment from Brazoria 6 collected February 2009, Brazoria National Wildlife Refuge, Texas

text: bioreactor metagenome


text: Texas A&M University

text: live

text: Generic

text: 16S rRNA gene pyrotags of the carboxylate platform laboratory screen collected at day 30 operated with paper at 55 deg C inoculated with sediment from Brazoria 9 collected February 2009, Brazoria National Wildlife Refuge, Texas

text: bioreactor metagenome


text: Texas A&M University

text: live

text: Generic

text: 16S rRNA gene pyrotags of the carboxylate platform laboratory screen collected at day 30 operated with paper at 55 deg C inoculated with sediment from Brazoria 2 collected June 2009, Brazoria National Wildlife Refuge, Texas

text: bioreactor metagenome


text: Texas A&M University

text: live

text: Generic

text: 16S rRNA gene pyrotags of the carboxylate platform laboratory screen collected at day 30 operated with paper at 55 deg C inoculated with sediment from Brazoria 5 collected June 2009, Brazoria National Wildlife Refuge, Texas

text: bioreactor metagenome


text: Texas A&M University

text: live

text: Generic

text: 16S rRNA gene pyrotags of the carboxylate platform laboratory screen collected at day 30 operated with paper at 55 deg C inoculated with sediment from Brazoria 6 collected June 2009, Brazoria National Wildlife Refuge, Texas

text: bioreactor metagenome


text: Texas A&M University

text: live

text: Generic

text: 16S rRNA gene pyrotags of the carboxylate platform laboratory screen collected at day 30 operated with paper at 55 deg C inoculated with sediment from Brazoria 9 collected June 2009, Brazoria National Wildlife Refuge, Texas

text: bioreactor metagenome


text: Texas A&M University

text: live

text: Generic

text: 16S rRNA gene pyrotags of the carboxylate platform laboratory screen collected at day 30 operated with paper at 55 deg C inoculated with sediment from Brazoria 2 collected October 2009, Brazoria National Wildlife Refuge, Texas

text: bioreactor metagenome


text: Texas A&M University

text: live

text: Generic

text: 16S rRNA gene pyrotags of the carboxylate platform laboratory screen collected at day 30 operated with paper at 55 deg C inoculated with sediment from Brazoria 5 collected October 2009, Brazoria National Wildlife Refuge, Texas

text: bioreactor metagenome


text: Texas A&M University

text: live

text: Generic

text: 16S rRNA gene pyrotags of the carboxylate platform laboratory screen collected at day 30 operated with paper at 55 deg C inoculated with sediment from Brazoria 6 collected October 2009, Brazoria National Wildlife Refuge, Texas

text: bioreactor metagenome


text: Texas A&M University

text: live

text: Generic

text: 16S rRNA gene pyrotags of the carboxylate platform laboratory screen collected at day 30 operated with paper at 55 deg C inoculated with sediment from Brazoria 9 collected October 2009, Brazoria National Wildlife Refuge, Texas

text: bioreactor metagenome


text: Biodiversity Research Center, Academia Sinica

text: live

text: Generic

text: Microbial metagenome at 5m depth

text: Bacteria

text: Microbial metagenome, July 2007


text: live

text: Generic

text: Microbial metagenome at 5m depth

text: Bacteria

text: Microbial metagenome, August 2007


text: live

text: Generic

text: Viral metagenome at 5m depth

text: Viruses

text: Viral metagenome, July 2007


text: live

text: Generic

text: Viral metagenome at 5m depth

text: Viruses

text: Viral metagenome, August 2007


text: Cancer Epigenetics and Gene Therapy Program, The State-key Laboratory for Oncogenes and Relatead Genes, Shanghai Cancer Institute

text: live

text: Generic

text: cancer

text: Homo sapiens

text: Equal amounts of DNA from 5637 and T24

text: bladder

characteristic: tissue type


text: live

text: Generic

characteristic: NCBI submission package

text: normal

text: Homo sapiens

text: Equal amounts of DNA from two normals

text: bladder


text: J. Craig Venter Institute

text: live

text: Generic

text: Genomic DNA was obtained from axenic culture of Entamoeba histolytica strain DS4-868 from Dr. Rashidul Haque, ICDDR,B Mohakhali, Dhaka-1212. Bangladesh

characteristic: description

text: Entamoeba histolytica MS96-3382

text: Generic sample from Entamoeba histolytica MS96-3382


text: Stowers Institute

text: live

text: Generic

text: Single crossover detected between 6,601,365 (parent: white) and 6,601,675 (parent: Canton-S).

text: Drosophila melanogaster

characteristic: organism


text: Stowers Institute

text: live

text: Generic

text: Single crossover detected between 8,000,862 (parent: white) and 8,001,116 (parent: Canton-S). False positive gene conversion detected at 268,501.

text: Drosophila melanogaster

characteristic: title


characteristic: External Id

text: Stowers Institute

text: live

text: Generic

text: Single crossover detected between 12,813,592 (parent: white) and 12,814,988 (parent: Canton-S). False positive gene conversion detected at 9,215,074.

text: Drosophila melanogaster


text: Stowers Institute

characteristic: INSDC center name

text: live

text: Generic

text: Single crossover detected between 15,696,462 (parent: Canton-S) and 15,697,193 (parent: white). False positive gene conversion detected at 18,999,675.

text: Drosophila melanogaster


text: Stowers Institute

text: live

text: Generic

characteristic: SRA accession

text: Double crossover detected between 5,441,397 (parent: Canton-S) and 5,441,591 (parent: white) and 16,511,826 (parent: white) and 16,514,097 (parent: Canton-S). Gene conversion between 6,633,119 and 6,633,865. Conversion tract from Canton-S parent. Min tract length of 144 and max tract length of 746. Verified SNPs or InDels in the tract: 6,633,448, 6,633,455, 6,633,584, and 6,633,592. False positive gene conversion detected at 5,189,307. False positive gene conversion detected at 17,689,327.

text: Drosophila melanogaster


text: Stowers Institute

text: live

text: Generic

text: X chromosome from Canton-S parent. False positive gene conversion detected at 1,200,997.

text: Drosophila melanogaster


text: Stowers Institute

text: live

text: Generic

text: X chromosome from white parent. No events detected.

text: Drosophila melanogaster


text: Stowers Institute

text: live

text: Generic

text: Double crossover detected between 11,992,791 (parent: white) and 11,994,201 (parent: Canton-S) and 19,451,465 (parent: Canton-S) and 19,453,294 (parent: white).

text: Drosophila melanogaster


text: Stowers Institute

text: live

text: Generic

text: X chromosome from Canton-S parent. Gene conversion between 15,151,729 and 15,152,643. Conversion tract from white parent. Min tract length of 187 and max tract length of 914. Verified SNPs or InDels in the tract: 15,151,810, 15,151,826, and 15,151,997. False positive gene conversion detected at 12,707,830. False positive gene conversion detected at 237,888. False positive gene conversion detected at 15,151,810.

text: Drosophila melanogaster


text: Stowers Institute

text: live

text: Generic

text: Single crossover detected between 8,834,132 (parent: Canton-S) and 8,834,399 (parent: white).

text: Drosophila melanogaster


text: Stowers Institute

text: live

text: Generic

text: Single crossover detected between 2,413,159 (parent: white) and 2,413,912 (parent: Canton-S). False positive gene conversion detected at 20,586,835.

text: Drosophila melanogaster


text: Stowers Institute

text: live

text: Generic

text: Single crossover detected between 10,437,477 (parent: white) and 10,455,495 (parent: Canton-S). False positive gene conversion detected at 268,501.

text: Drosophila melanogaster


text: Stowers Institute

text: live

text: Generic

text: X chromosome from Canton-S parent. No events detected.

text: Drosophila melanogaster


text: Stowers Institute

text: live

text: Generic

text: X chromosome from Canton-S parent. False positive gene conversion detected at 19,306,566.

text: Drosophila melanogaster


text: Stowers Institute

text: live

text: Generic

text: X chromosome from white parent. False positive gene conversion detected at 8,250,117.

text: Drosophila melanogaster


text: Stowers Institute

text: live

text: Generic

text: Single crossover detected between 4,860,933 (parent: white) and 4,861,309 (parent: Canton-S).

text: Drosophila melanogaster


text: Stowers Institute

text: live

text: Generic

text: Single crossover detected between 8,862,810 (parent: Canton-S) and 8,863,096 (parent: white). False positive gene conversion detected at 8874618. False positive gene conversion detected at 164,089.

text: Drosophila melanogaster


text: Stowers Institute

text: live

text: Generic

text: X chromosome from Canton-S parent. Gene conversion between 9,157,653 and 9,161,089. Conversion tract from white parent. Min tract length of 235 and max tract length of 3,436. Verified SNPs or InDels in the tract: 9,159,700, 9,159,737, and 9,159,935. Gene conversion between 19,520,853 and 19,521,507. Conversion tract from white parent. Min tract length of 87 and max tract length of 654. Verified SNPs or InDels in the tract: 19,521,068, 19,521,071, and 19,521,155.

text: Drosophila melanogaster


text: Stowers Institute

text: live

text: Generic

text: X chromosome from Canton-S parent. Gene conversion between 10,914,005 and 10,916,406. Conversion tract from white parent. Min tract length of 612 and max tract length of 2,401. Verified SNPs or InDels in the tract: 10,914,112, 10,914,118, 10,914,307, 10,914,119, 10,914,382, 10,914,134, 10,914,688, 10,914,149, 10,914,716, 10,914,244, 10,914,721, 10,914,265, 10,914,724, 10,914,295, and 10,914,724.

text: Drosophila melanogaster


text: Stowers Institute

text: live

text: Generic

text: X chromosome from Canton-S parent. False positive gene conversion detected at 6,876,237. False positive gene conversion detected at 3,762,602. False positive gene conversion detected at 7,647,353.

text: Drosophila melanogaster


text: Stowers Institute

text: live

text: Generic

text: X chromosome from white parent. False positive gene conversion detected at 8,911,293.

text: Drosophila melanogaster


text: Stowers Institute

text: live

text: Generic

text: X chromosome from white parent. False positive gene conversion detected at 8,250,117. False positive gene conversion detected at 8,804,104. False positive gene conversion detected at 12,247,068.

text: Drosophila melanogaster


text: Stowers Institute

text: live

text: Generic

text: X chromosome from white parent. False positive gene conversion detected at 8,804,104.

text: Drosophila melanogaster


text: Stowers Institute

text: live

text: Generic

text: Double crossover detected between 11,968,504 (parent: Canton-S) and 11,969,790 (parent: white) and 19,291,635 (parent: white) and 19,293,197 (parent: Canton-S).

text: Drosophila melanogaster


sp1 G2

text: UMass Medical School

text: live

text: Generic

text: DNAs from elutriated G2 phase cells of wt S.pombe sequenced using Helicos whole genome protocol

text: Schizosaccharomyces pombe

text: Sp1 G2


sp1 S

text: UMass Medical School

text: live

text: Generic

text: DNAs from HU arrested S phase cells of wt S.pombe sequenced using Helicos whole genome protocol

text: Schizosaccharomyces pombe

text: Sp1 S


sp2 G2

text: UMass Medical School

text: live

text: Generic

text: DNAs from elutriated G2 phase cells of dfp1-3A S.pombe sequenced using Helicos whole genome protocol

text: Schizosaccharomyces pombe

text: Sp2 G2


sp2 S

text: UMass Medical School

text: live

text: Generic

text: DNAs from HU arrested S phase cells of dfp1-3A S.pombe sequenced using Helicos whole genome protocol

text: Schizosaccharomyces pombe

text: Sp2 S


sp3 G2

text: UMass Medical School

text: live

text: Generic

text: DNAs from G2 arrested cells of cdc25-22 S.pombe sequenced using Helicos whole genome protocol

text: Schizosaccharomyces pombe

text: Sp3 G2


sp3 S

text: UMass Medical School

text: live

text: Generic

text: DNAs from G2 block and release, HU arrested S phase cells of cdc25-22 S.pombe sequenced using Helicos whole genome protocol

text: Schizosaccharomyces pombe

text: Sp3 S


So1 G2

text: UMass Medical School

text: live

text: Generic

text: DNAs from elutriated G2 phase cells of wt S.octosporus sequenced using Helicos whole genome protocol

text: Schizosaccharomyces octosporus

text: So1 G2


So1 S

text: UMass Medical School

text: live

text: Generic

text: DNAs from HU arrested S phase cells of wt S.octosporus sequenced using Helicos whole genome protocol

text: Schizosaccharomyces octosporus

text: So1 S


Sj1 G2

text: UMass Medical School

text: live

text: Generic

text: DNAs from elutriated G2 phase cells of wt S.japonicus sequenced using Helicos whole genome protocol

text: Schizosaccharomyces japonicus

text: Sj1/2 G2


Sj1 S

text: UMass Medical School

text: live

text: Generic

text: DNAs from HU arrested S phase cells of wt S.japonicus sequenced using Helicos whole genome protocol

text: Schizosaccharomyces japonicus

text: Sj1 S


Sj2 S

text: UMass Medical School

text: live

text: Generic

text: Schizosaccharomyces japonicus

text: Sj2 S


text: University of California - Davis, Drosophila Population Genomics Project

text: live

text: Generic

text: Sub-Saharan African population - Zambia (Siavonga). Haploid embryo.

text: Drosophila melanogaster


text: Institute of Oceanology, Chinese Academy of Sciences

text: live

text: Generic

text: sporophyte

characteristic: development stage

text: Saccharina japonica

text: mature thalli

characteristic: sample type

text: healthy thalli of S. japonica

text: vegetative tissue

characteristic: tissue

text: Dark sample RNA-Seq

text: dark

characteristic: treatment


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: sporophyte

text: Saccharina japonica

text: mature thalli

text: healthy thalli of S. japonica

text: vegetative tissue

text: Blue light sample RNA-Seq

text: blue light


text: Huazhong Agricultural University

text: live

characteristic: INSDC status

text: Generic

text: Navel orange

characteristic: cultivar

text: PCR-select cDNA subtraction library (Clonetech)

text: juvenile

characteristic: dev-stage

text: Escherichia coli DH5alpha

characteristic: lab-host

text: Citrus sinensis

text: sprouting shoot

characteristic: tissue-type

text: altered leaf shape mutant of the navel orange [Citrus sinenesis (L.) Osbeck] subtracted cDNA library

characteristic: vector


text: HudsonAlpha Genome Sequencing Center

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: The library was constructed and clones can be obtained from the Arizona Genomics Institute http://www.genome.arizona.edu/orders/

characteristic: description

text: Eucalyptus grandis

characteristic: organism

text: BstYI

text: BAC


characteristic: External Id

text: HudsonAlpha Genome Sequencing Center

characteristic: INSDC center name

text: live

text: Generic

text: Eucalyptus grandis

text: HindIII

characteristic: title

text: BAC


Faucet biofilm bacteria

text: Graduate University of Chinese Academy of Sciences

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: Bacteria

text: Characteristics of bacterial and eukaryotic communities in faucet biofilms revealed by pyrosequencing analysis


Faucet biofilm eukaryotes

characteristic: INSDC first public

text: live

text: Generic

text: Eukaryota


AA_lower jaw_pre-cut_0hpa

text: Shanghai Ocean University

characteristic: INSDC last update

text: live

text: Generic

text: AA_lower jaw_pre-cut_0hpa

text: Danio rerio

text: Sample 1


A2_lower jaw_pre-cut_0hpa

text: Shanghai Ocean University

text: live

characteristic: INSDC status

text: Generic

text: A2_lower jaw_pre-cut_0hpa

text: Danio rerio

text: Sample 2


BB_lower jaw_regenerate_2hpa

text: Shanghai Ocean University

text: live

text: Generic

text: BB_lower jaw_regenerate_2hpa

text: Danio rerio

text: Sample 3


B2_lower jaw_regenerate_2hpa

text: Shanghai Ocean University

text: live

text: Generic

text: B2_lower jaw_regenerate_2hpa

text: Danio rerio

text: Sample 4


CC_lower jaw_regenerate_2dpa

text: Shanghai Ocean University

text: live

text: Generic

text: Danio rerio

text: Sample 5


C2_lower jaw_regenerate_2dpa

text: Shanghai Ocean University

text: live

text: Generic

text: C2_lower jaw_regenerate_2dpa

text: Danio rerio

text: Sample 6


DD_lower jaw_regenerate_5dpa

text: Shanghai Ocean University

text: live

text: Generic

text: DD_lower jaw_regenerate_5dpa

text: Danio rerio

text: Sample 7


D2_lower jaw_regenerate_5dpa

text: Shanghai Ocean University

text: live

text: Generic

text: D2_lower jaw_regenerate_5dpa

text: Danio rerio

text: Sample 8


text: University of British Columbia

text: live

text: Generic

text: Theobroma cacao

text: T. cacao variety ICS-01


text: University of British Columbia

text: live

text: Generic

text: Theobroma cacao

text: T. cacao variety Scavina-6


text: University of British Columbia

text: live

text: Generic

text: Theobroma cacao

text: T. cacao variety ICS-06


text: University of British Columbia

text: live

text: Generic

text: Theobroma cacao

text: T. cacao variety Amelonado


Stahel

text: University of British Columbia

text: live

text: Generic

text: Theobroma cacao

text: T. cacao variety Stahel


Pentagonum

text: University of British Columbia

text: live

text: Generic

text: Theobroma cacao

text: T. cacao variety Pentagonum


text: University of British Columbia

text: live

text: Generic

text: Theobroma cacao

text: T. cacao variety ICS-39


Theobroma grandiflorum

text: University of British Columbia

text: live

text: Generic

text: Theobroma grandiflorum

text: Theobroma grandiflorum


M1 16S rRNA V1V2 region tag-sequencing

text: Biodiversity Research Center, Academia Sinica

text: live

text: Generic

text: Bacteria

text: Community 16S rRNA V1V2 tag-sequencing, July 2007


M2 16S rRNA V1V2 region tag-sequencing

text: live

text: Generic

text: Bacteria

text: Community 16S rRNA V1V2 tag-sequencing, August 2007


milk, whey, cooked whey and cheese

text: IASMA research centre FEM Fundation

text: live

text: Generic

text: primer forward ctacgggaggcagcag primer reverse attaccgcggctgctgg. sample, MID Sequence forward, MID sequence reverse. VM, acgagtgcgt, acgagtgcgt; NSC, acgctcgaca, acgctcgaca; CW, acgctcgaca, acgagtgcgt; UR 9mo, agacgcactc, agacgcactc; MS 9mo, atcagacacg, atcagacacg; Co 9mo, cgtgtctcta, cgtgtctcta; UR 18mo, ctcgcgtgtc, ctcgcgtgtc; MS 18mo, tctctatgcg, tctctatgcg; Co 18mo, acgctcgaca, agacgcactc.

text: Lactobacillus helveticus

text: Vat Milk (VM), Natural Starter Cultures (NSC), Cooked Whey (CW), Cheese 9 months, Unde Rind (UR 9mo), Middle Section (MS 9mo) and Core (Co 9mo); cheese 18 months Unde Rind (UR 18mo), Middle Section (MS 18mo) and Core (Co 18mo);


text: University of Zürich

text: live

text: Generic

text: wildtype

characteristic: maternal genotype/variation

text: Landsberg erecta (Ler)

characteristic: maternal strain

text: Arabidopsis thaliana

text: wildtype

characteristic: paternal genotype/variation

text: Columbia_0 (Col0)

characteristic: paternal strain

text: embryos (dissected)

text: 2-to-4 cells embryo stage with suspensor (partial)

characteristic: stage

text: total amplified RNA, 2-to-4 cells Ler/Col embryos, sample # MC_LerCol_11


text: University of Zürich

text: live

text: Generic

characteristic: NCBI submission model

text: Landsberg erecta (Ler)

text: Arabidopsis thaliana

text: wildtype

text: Columbia_0 (Col0)

text: embryos (dissected)

text: total amplified RNA, 2-to-4 cells Ler/Col embryos, sample # MC_kypCol_12


text: Spivack, Pulmonary Medicine, Albert Einstein College of Medicine

text: live

text: Generic

characteristic: NCBI submission package

text: Homo sapiens

text: Lung tissue


text: Tapscott, Human Biology, Fred Hutchison Cancer Research Center

text: live

text: Generic

text: human myoblasts

characteristic: cell type

text: Combined anti-DUX4 C-terminus rabbit polyclonal antibodies MO488 and MO489

characteristic: chip antibody

text: Homo sapiens

text: myoblasts transduced with lentivirus carrying DUX4

characteristic: treatment


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: human myoblasts

text: Combined anti-DUX4 C-terminus rabbit polyclonal antibodies MO488 and MO490

text: Homo sapiens

characteristic: organism

text: untransduced

text: untransduced


text: Young Lab, Whitehead Institute for Biomedical Research

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: Santa Cruz SC-349

characteristic: antibody catalog number

text: Santa Cruz

characteristic: antibody manufacturer

text: CCRF-CEM

characteristic: cell line

text: Homo sapiens

text: T-ALL cell line

text: E2A ChIP-seq CCRF-CEM

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: Santa Cruz SC-22206

text: Santa Cruz

text: CCRF-CEM

text: Homo sapiens

text: T-ALL cell line

text: GATA3 ChIP-seq CCRF-CEM


text: live

text: Generic

characteristic: NCBI submission model

text: Santa Cruz SC-357

text: Santa Cruz

text: CCRF-CEM

text: Homo sapiens

text: T-ALL cell line

text: HEB ChIP-seq CCRF-CEM 1


text: live

text: Generic

characteristic: NCBI submission package

text: Santa Cruz SC-357

text: Santa Cruz

text: CCRF-CEM

text: Homo sapiens

text: T-ALL cell line

text: HEB ChIP-seq CCRF-CEM 2


text: live

text: Generic

text: None WCE

text: CCRF-CEM

text: Homo sapiens

text: T-ALL cell line

text: Input WCE ChIP-seq CCRF-CEM 1


text: live

text: Generic

text: None WCE

text: Homo sapiens

text: T-ALL primagraft 05-261

characteristic: sample type

text: T-ALL primagraft

text: Input WCE ChIP-seq Prima2 T-ALL 1


text: live

text: Generic

text: None WCE

text: Homo sapiens

text: T-ALL primagraft 05-386

text: T-ALL primagraft

text: Input WCE ChIP-seq Prima5 T-ALL 1


text: live

text: Generic

text: R&D Systems AF2726

text: R&D Systems

text: CCRF-CEM

characteristic: chip antibody

text: Homo sapiens

text: T-ALL cell line

text: LMO2 ChIP-seq CCRF-CEM 1


text: live

text: Generic

text: R&D Systems AF2726

text: R&D Systems

text: CCRF-CEM

text: Homo sapiens

text: T-ALL cell line

text: LMO2 ChIP-seq CCRF-CEM 2


text: live

text: Generic

text: Santa Cruz SC-8563

text: Santa Cruz

text: CCRF-CEM

text: Homo sapiens

text: T-ALL cell line

text: RUNX1 ChIP-seq CCRF-CEM 1


text: live

text: Generic

text: Santa Cruz SC-8563

text: Santa Cruz

text: CCRF-CEM

text: Homo sapiens

text: T-ALL cell line

text: RUNX1 ChIP-seq CCRF-CEM 2


text: live

text: Generic

text: Santa Cruz SC-12984

text: Santa Cruz

text: CCRF-CEM

text: Homo sapiens

text: T-ALL cell line

text: TAL1 ChIP-seq CCRF-CEM 1


text: live

text: Generic

text: Santa Cruz SC-12984

text: Santa Cruz

text: CCRF-CEM

text: Homo sapiens

text: T-ALL cell line

text: TAL1 ChIP-seq CCRF-CEM 2


text: live

text: Generic

text: Santa Cruz SC-12984

text: Santa Cruz

text: Homo sapiens

text: T-ALL primagraft 05-261

text: T-ALL primagraft

text: TAL1 ChIP-seq Prima2 T-ALL 1


text: live

text: Generic

text: Santa Cruz SC-12984

text: Santa Cruz

text: Homo sapiens

text: T-ALL primagraft 05-261

text: T-ALL primagraft

text: TAL1 ChIP-seq Prima2 T-ALL 2


text: live

text: Generic

text: Santa Cruz SC-12984

text: Santa Cruz

text: Homo sapiens

text: T-ALL primagraft 05-386

text: T-ALL primagraft

text: TAL1 ChIP-seq Prima5 T-ALL 1


text: live

text: Generic

text: Santa Cruz SC-12984

text: Santa Cruz

text: Homo sapiens

text: T-ALL primagraft 05-386

text: T-ALL primagraft

text: TAL1 ChIP-seq Prima5 T-ALL 2


text: live

text: Generic

text: None WCE

text: Homo sapiens

text: T-ALL primagraft 05-261

text: T-ALL primagraft

text: Input WCE ChIP-seq Prima2 T-ALL 2


text: live

text: Generic

text: None WCE

text: Homo sapiens

text: T-ALL primagraft 05-386

text: T-ALL primagraft

text: Input WCE ChIP-seq Prima5 T-ALL 2


text: live

text: Generic

text: None WCE

text: CCRF-CEM

text: Homo sapiens

text: T-ALL cell line

text: Input WCE ChIP-seq CCRF-CEM 2


text: live

text: Generic

text: Santa Cruz SC-10494

text: Santa Cruz

text: Jurkat E6-1

text: Homo sapiens

text: T-ALL cell line

text: LMO1 ChIP-seq Jurkat 1


text: live

text: Generic

text: Santa Cruz SC-10494

text: Santa Cruz

text: Jurkat E6-1

text: Homo sapiens

text: T-ALL cell line

text: LMO1 ChIP-seq Jurkat 2


text: Department of Botany and Plant Sciences, University of California, Riverside

text: live

text: Generic

characteristic: age

text: Columbia

characteristic: ecotype

text: Arabidopsis thaliana

text: seedlings

text: 300mM NaCl for 5 hours

characteristic: stress

text: Shoots

characteristic: tissue


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Generic

text: Col gl1 RD29:LUC

text: Arabidopsis thaliana

characteristic: organism

text: seedlings

text: 5 ˚C for 24 hours

text: Shoots


text: Archer Lab, School of Biology, University of Nottingham

text: live

text: Generic

characteristic: SRA accession

text: Glucose 48 h

characteristic: growth condition

text: Aspergillus niger

text: Wild-type A. niger mycelia

characteristic: strain

text: mycelia

text: Glucose 48 h A


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Glucose 48 h

text: Aspergillus niger

text: Wild-type A. niger mycelia

text: mycelia

text: Glucose 48 h B

characteristic: title


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Glucose 48 h

text: Aspergillus niger

text: Wild-type A. niger mycelia

text: mycelia

text: Glucose 48 h C


text: live

text: Generic

text: Straw 24 h

text: Aspergillus niger

text: Wild-type A. niger mycelia

text: mycelia

text: Straw 24 h A


text: live

text: Generic

text: Straw 24 h

text: Aspergillus niger

text: Wild-type A. niger mycelia

text: mycelia

text: Straw 24 h B


text: live

text: Generic

text: Straw 24 h

text: Aspergillus niger

text: Wild-type A. niger mycelia

text: mycelia

text: Straw 24 h C


text: live

text: Generic

text: Straw + Glucose 5

text: Aspergillus niger

text: Wild-type A. niger mycelia

text: mycelia

text: Glucose + Straw 5 h A


text: live

text: Generic

text: Straw + Glucose 5

text: Aspergillus niger

text: Wild-type A. niger mycelia

text: mycelia

text: Glucose + Straw 5 h B


text: live

text: Generic

text: Straw + Glucose 5

text: Aspergillus niger

text: Wild-type A. niger mycelia

text: mycelia

text: Glucose + Straw 5 h C


text: University of Zürich

text: live

text: Generic

text: wildtype

characteristic: maternal genotype/variation

text: Columbia_0 (Col0)

characteristic: maternal strain

text: Arabidopsis thaliana

text: wildtype

characteristic: paternal genotype/variation

text: Landsberg erecta (Ler)

characteristic: paternal strain

text: embryos (dissected)

text: globular embryo stage with suspensor (partial)

characteristic: stage

text: total amplified RNA, globular Col/Ler embryos, sample # MC_ColLer_2


characteristic: External Id

text: Casellas lab, NIAMS, NIH

characteristic: INSDC center name

text: live

text: Generic

text: in vitro activated mouse B cells

characteristic: cell type

text: anti-CTCF

characteristic: chip antibody

text: CTCF

characteristic: chip target

text: CD43 negative magnetic beads selection

characteristic: isolation

text: Mus musculus

text: spleen

characteristic: source

text: Mouse Mature B cells, Spleen, in vitro LPS/IL-4 activated

text: CTCF/activated B cells/wt

text: 07-729 Millipore rabbit polyclonal ab

characteristic: vendor


text: University of Montreal

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: wild type

characteristic: genotype/variation

text: Mus musculus

characteristic: organism

text: wt mouse

text: Fetal liver sample for RNA-seq 1

characteristic: title


text: University of Montreal

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: wild type

text: Mus musculus

text: wt mouse

text: Fetal liver sample for RNA-seq 2


characteristic: External Id

text: University of Montreal

characteristic: INSDC center name

text: live

text: Generic

text: hnRNP L -/-

text: Mus musculus

text: hnRNP L KO mouse

text: Fetal liver sample for RNA-seq 3


text: University of Montreal

text: live

text: Generic

text: hnRNP L -/-

text: Mus musculus

text: hnRNP L KO mouse

text: Fetal liver sample for RNA-seq 4


text: Baylor College of Medicine

text: live

text: Generic

characteristic: cell line

text: anti-N-6-methyladenosine antibody (α-N6MA)

characteristic: damip antibody

characteristic: damip antibody lot

text: Megabase Research Products

characteristic: damip antibody vendor

text: Homo sapiens

text: DamK9A DamIPseq

characteristic: transfected with


text: Baylor College of Medicine

characteristic: INSDC first public

text: live

text: Generic

text: Megabase Research Products

text: Homo sapiens

text: DamK9A-hERalpha DamIPseq


text: LCBS-MIIB, NIAMS, NIH

characteristic: INSDC last update

text: live

text: Generic

text: freshly isolated naive CD4+ T cells

characteristic: cell type

characteristic: genetic background

text: Mus musculus

text: FACS sorted naive CD4+T cells

characteristic: passages

text: primary CD4+ T cells from spleen and lymph nodes

text: C57BL/6J (wild type)

characteristic: strain

text: DHS WT naive

text: 180 U/mL DNAseI

characteristic: treatment


text: LCBS-MIIB, NIAMS, NIH

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: SRA accession

text: in vitro polarized T helper1 cells for 7 days

text: Mus musculus

characteristic: organism

text: FACS sorted naive CD4+T cells cultured in vitro for 7 days under Th1 condition and restimulated with plate-bound CD3/28 +IL12 for 2 hrs

text: C57BL/6J (wild type)

text: DHS WT Th1

characteristic: title

text: 60 U/mL DNAseI


characteristic: External Id

text: LCBS-MIIB, NIAMS, NIH

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: chip antibody

text: Abcam

characteristic: chip antibody manufacturer

text: Mus musculus

text: C57BL/6J (wild type)

text: H3K4me3 WT Th1


text: LCBS-MIIB, NIAMS, NIH

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Abcam

text: Mus musculus

text: C57BL/6J (wild type)

text: H3K36me3 WT Th1


text: LCBS-MIIB, NIAMS, NIH

text: live

text: Generic

characteristic: cell type

text: Abcam

characteristic: genetic background

text: Mus musculus

text: C57BL6-STAT4<tm1> (STAT4KO)

text: H3K4me3 S4KO Th1


text: LCBS-MIIB, NIAMS, NIH

text: live

text: Generic

text: Abcam

text: Mus musculus

characteristic: passages

text: C57BL6-STAT4<tm1> (STAT4KO)

characteristic: strain

text: H3K36me3 S4KO Th1


text: LCBS-MIIB, NIAMS, NIH

characteristic: INSDC secondary accession

text: live

text: Generic

text: Abcam

text: Mus musculus

text: B6.129S6-Tbx21<tm1Glm>/J (TbetKO)

text: H3K4me3 TbetKO Th1


text: LCBS-MIIB, NIAMS, NIH

text: live

characteristic: INSDC status

text: Generic

text: Abcam

text: Mus musculus

text: B6.129S6-Tbx21<tm1Glm>/J (TbetKO)

text: H3K36me3 TbetKO Th1


text: LCBS-MIIB, NIAMS, NIH

text: live

text: Generic

characteristic: SRA accession

text: T-bet

text: Santa Crus

text: Mus musculus

text: C57BL/6J (wild type)

text: Tbet WT Th1


text: Laboratory Medicine, UCSF

text: live

text: Generic

text: 4 week

characteristic: age

text: Ikaros-N terminal Ab (IkN)

text: wt

characteristic: genotype/variation

text: Mus musculus

characteristic: organism

text: Whole Thymus

text: Thymus

characteristic: tissue

text: Thymus wt_c3


characteristic: External Id

text: Laboratory Medicine, UCSF

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

text: 4 week

text: Ikaros-N terminal Ab (IkN)

text: Mus musculus

text: Whole Thymus

text: Thymus

text: Thymus Ikaros ZnF1-/- c3

characteristic: title


text: Laboratory Medicine, UCSF

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

text: 4 week

text: Ikaros-N terminal Ab (IkN)

characteristic: chip antibody

text: Mus musculus

text: Whole Thymus

text: Thymus

text: Thymus Ikaros ZnF1-/- c5


text: Laboratory Medicine, UCSF

characteristic: INSDC last update

text: live

text: Generic

text: 4 week

text: Ikaros-N terminal Ab (IkN)

text: Mus musculus

text: Whole Thymus

text: Thymus

text: Thymus Ikaros ZnF4-/- c5


text: Laboratory Medicine, UCSF

text: live

text: Generic

text: 4 week

text: wt

text: Mus musculus

text: Whole Thymus

text: Thymus

text: Thymus wt input


text: Computational and Systems Biology, Genome Institute of Singapore

text: live

text: Generic

text: MCF-7 breast cancer cells

characteristic: cell line

text: RNA Pol II (8WG16 clone, MMS-126R, Covance)

text: Homo sapiens

text: MCF-7 breast cancer cells


text: live

text: Generic

text: HCT116 colorectal cancer cells

text: Homo sapiens

text: HCT116 cancer cells


text: live

text: Generic

text: HeLa cells

text: Homo sapiens

text: HeLa cells


text: live

text: Generic

text: NB4 cells

text: Homo sapiens

text: NB4 cells


text: live

text: Generic

text: K562 cells

text: Homo sapiens

text: K562 cells


text: IGBMC

text: live

text: Generic

characteristic: amplification

text: breast cancer cells

characteristic: cell type

text: Abcam

characteristic: chip antibody manufacturer

text: chromatin IP against H3K4me3 ( Abcam: AB1012 )

characteristic: comment

text: Homo sapiens

text: H3K4me3 e2 1M

text: H3K4me3 e2 1M rep1

characteristic: treatment


text: IGBMC

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: SRA accession

text: breast cancer cells

text: Abcam

text: Homo sapiens

text: H3K4me3 e2 1M

text: H3K4me3 e2 1M rep2


characteristic: External Id

text: IGBMC

text: live

text: Generic

text: 1k LinDA

text: breast cancer cells

text: Abcam

text: Homo sapiens

characteristic: organism

text: H3K4me3 e2 1k LinDA

text: H3K4me3 e2 1k LinDA rep2


text: IGBMC

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

text: 1k LinDA

text: breast cancer cells

text: Abcam

text: Homo sapiens

text: H3K4me3 e2 1k LinDA

text: H3K4me3 e2 1k LinDA rep1


text: IGBMC

characteristic: INSDC first public

text: live

text: Generic

text: 100k LinDA

text: breast cancer cells

text: ER-alpha

text: Santa Cruz

text: chromatin IP against ER-alpha (Santa Cruz Biotech: HC20 )

text: Homo sapiens

text: ERa e2 100k LinDA

text: ERa e2 100k LinDA rep1

characteristic: title


text: IGBMC

text: live

text: Generic

characteristic: NCBI submission package

text: 100k LinDA

text: breast cancer cells

text: ER-alpha

characteristic: chip antibody

text: Santa Cruz

text: Homo sapiens

text: ERa e2 100k LinDA

text: ERa e2 100k LinDA rep2


text: IGBMC

characteristic: INSDC last update

text: live

text: Generic

text: LinDA

characteristic: cell line

text: embryonal carcinoma cells

text: in-house polyclonal Ab against RXRa and RAR

text: in-house

text: sequential Chromatin IP against RXRa and RARg. In house polyclonal antibodies generated by immunization of rabbits with the following peptides: mRXRa: PB105 (MDTKHFLPLDFSTQVNSSSLNSPTGRGC)]; mRARg: PB288 (CSKPGPHPKASSEDEAPGGQGKRGQSPQPD)]

text: Mus musculus

text: mRXRa RARg reChIP LinDA

text: mRXRa RARg reChIP LinDA


text: IGBMC

text: live

text: Generic

text: 100xfold-diluted LinDA

characteristic: amplification

text: embryonal carcinoma cells

characteristic: cell type

text: in-house polyclonal Ab against RXRa

text: in-house

text: Chromatin IP against RXRa. In house polyclonal antibody generated by immunization of rabbits with the following peptide: mRXRa: PB105 (MDTKHFLPLDFSTQVNSSSLNSPTGRGC)]

text: Mus musculus

text: mRXRa 100xfold-diluted LinDA

text: mRXRa 100xfold-diluted LinDA


text: IGBMC

text: live

text: Generic

text: embryonal carcinoma cells

text: in-house polyclonal Ab against RXRa

text: in-house

characteristic: chip antibody manufacturer

characteristic: comment

text: Mus musculus


text: IGBMC

characteristic: INSDC secondary accession

text: live

text: Generic

text: 10k LinDA

text: breast cancer cells

text: Abcam

text: Homo sapiens

text: H3K4me3 e2 10k LinDA

text: H3K4me3 e2 10k LinDA rep2

characteristic: treatment


text: IGBMC

text: live

characteristic: INSDC status

text: Generic

characteristic: SRA accession

text: 10k LinDA

text: breast cancer cells

text: Abcam

text: Homo sapiens

text: H3K4me3 e2 10k LinDA

text: H3K4me3 e2 10k LinDA rep1


characteristic: External Id

text: IGBMC

text: live

text: Generic

text: 10k LinDA

text: breast cancer cells

text: ER-alpha

text: Santa Cruz

text: Homo sapiens

characteristic: organism

text: ERa e2 10k LinDA

text: ERa e2 10k LinDA rep1


text: IGBMC

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

text: 10k LinDA

text: breast cancer cells

text: ER-alpha

text: Santa Cruz

text: Homo sapiens

text: ERa e2 10k LinDA

text: ERa e2 10k LinDA rep2


text: IGBMC

characteristic: INSDC first public

text: live

text: Generic

text: 5k LinDA

text: breast cancer cells

text: ER-alpha

text: Santa Cruz

text: Homo sapiens

text: ERa e2 5k LinDA

text: ERa e2 5k LinDA rep1

characteristic: title


text: IGBMC

text: live

text: Generic

characteristic: NCBI submission package

text: 5k LinDA

text: breast cancer cells

text: ER-alpha

characteristic: chip antibody

text: Santa Cruz

text: Homo sapiens

text: ERa e2 5k LinDA

text: ERa e2 5k LinDA rep2


text: IGBMC

characteristic: INSDC last update

text: live

text: Generic

characteristic: cell line

text: breast cancer cells

text: ER-alpha

text: Santa Cruz

text: Homo sapiens

text: ERa e2 2M

text: ERa e2 2M rep1


text: IGBMC

text: live

text: Generic

characteristic: amplification

text: breast cancer cells

characteristic: cell type

text: ER-alpha

text: Santa Cruz

text: Homo sapiens

text: ERa e2 2M

text: ERa e2 2M rep2


text: UCSD

text: live

text: Generic

text: male

characteristic: gender

text: Mus musculus

text: Frontal cortex

text: 129X1/SvJ x Cast/EiJ

characteristic: strain

text: frontal cortex

characteristic: tissue


text: UCSD

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: male

text: Mus musculus

text: Frontal cortex

text: Cast/EiJ x 129X1/SvJ

text: frontal cortex


characteristic: External Id

text: UCSD

text: live

text: Generic

characteristic: SRA accession

text: Mus musculus

text: murine embryonic fibroblast

characteristic: sample type

text: MEF cell


text: UCSD

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

text: Homo sapiens

characteristic: organism

text: human fibroblast IMR90

text: IMR90 cell


text: Sandelin, Dep. of Biology, University of Copenhagen

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

text: Anti-trimethyl-Histone H3 (Lys4)

characteristic: chip antibody catalog number

text: Millipore

characteristic: chip antibody vendor

text: embryo

characteristic: developmental stage

text: shield

characteristic: embryogenesis stage

text: Danio rerio

characteristic: title


characteristic: INSDC last update

text: live

text: Generic

text: Anti-trimethyl-Histone H3 (Lys27)

characteristic: chip antibody

text: Millipore

text: embryo

text: shield

text: Danio rerio


characteristic: INSDC secondary accession

text: live

text: Generic

text: embryo

text: shield

text: Danio rerio


text: UCSD

text: live

characteristic: INSDC status

text: Generic

text: Mus musculus

text: Frontal cortex

text: 129X1/SvJ x Cast/EiJ

characteristic: strain

text: frontal cortex

characteristic: tissue


characteristic: External Id

text: UCSD

text: live

text: Generic

characteristic: SRA accession

text: Mus musculus

text: Frontal cortex

text: Cast/EiJ x 129X1/SvJ

text: frontal cortex


text: Institute for Genome Sciences University of MD School of Medicine

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

text: Vibrio cholerae HC-55B2

text: Vibrio cholerae HC-55B2


A

text: CHGC at Shanghai

characteristic: INSDC first public

text: live

text: Generic

text: Bactrocera dorsalis

characteristic: organism

text: Transcriptome profile analysis of gene expression in the oriental fruit fly Bactrocera dorsalis during development


text: live

text: Generic

characteristic: NCBI submission package

text: embryogenesis: 2-4 cell stage

text: Danio rerio

text: 2-4cell RNA-Seq

characteristic: stdev for insert size

text: embryo


text: live

text: Generic

text: embryogenesis: 1K cell stage

characteristic: developmental stage

text: Danio rerio

text: 1K cell RNA-Seq

text: embryo


text: live

text: Generic

text: embryogenesis: dome stage

text: Danio rerio

text: Dome RNA-Seq

text: embryo


text: live

text: Generic

text: embryogenesis: shield stage

text: Danio rerio

text: Shield RNA-Seq

text: embryo


text: live

text: Generic

text: embryogenesis: bud stage

text: Danio rerio

text: Bud RNA-Seq

text: embryo


text: live

text: Generic

text: embryogenesis: 28 hpf stage

text: Danio rerio

text: 28 hpf RNA-Seq

text: embryo


text: live

text: Generic

text: embryogenesis: 2 dpf stage

text: Danio rerio

text: 2 dpf RNA-Seq

text: embryo


text: live

text: Generic

text: embryogenesis: 5 dpf stage

text: Danio rerio

text: 5 dpf RNA-Seq

text: embryo


text: Department of Molecular Biology (274), Radboud University

text: live

text: Generic

text: leukemic cells

characteristic: cell type

text: acute myeloid leukemia (AML)

characteristic: disease state

text: Homo sapiens

text: NlaIII (R0125L)

characteristic: restriction enzyme

text: AML patient cells (leukemic), untreated, NlaIII NA-Seq


characteristic: INSDC last update

text: live

text: Generic

characteristic: cell line

text: leukemic cells

text: Homo sapiens

text: NlaIII (R0125L)

text: SKNO-1 cells (leukemic), untreated, NlaIII NA-Seq

characteristic: title


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: leukemic cells

text: Homo sapiens

text: HpaII (R0171M)

text: SKNO-1 cells (leukemic), untreated, HpaII NA-Seq


characteristic: External Id

text: live

text: Generic

characteristic: antibody lot

text: Abcam

characteristic: antibody vendor

text: leukemic cells

characteristic: chip antibody

text: Homo sapiens

text: SKNO-1 cells (leukemic), untreated, H2A.Zac ChIP-Seq


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: Santa Cruz Biotechnology

text: leukemic cells

text: Homo sapiens

text: SKNO-1 cells (leukemic), untreated, p300 ChIP-Seq


text: Gang Wang's Lab, Institute of Biochemistry and Cell Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences

text: live

text: Generic

characteristic: NCBI submission package

text: HeLa

text: hnRNP L

text: Sigma-Aldrich

characteristic: chip antibody manufacturer

text: Homo sapiens

characteristic: organism

text: Hela cells knockdown control

text: hnrnpl sictrl ChIP-Seq

text: knockdown control

characteristic: treatment


characteristic: INSDC last update

text: live

text: Generic

text: HeLa

text: hnRNP L

text: Sigma-Aldrich

text: Homo sapiens

text: Hela cells knockdown Med23

text: hnrnpl si23 ChIP-Seq

text: knockdown Med23


text: live

text: Generic

text: HeLa

characteristic: cell line

text: Abcam

text: Homo sapiens

text: Hela cells knockdown control

text: h3k36me3 sictrl ChIP-Seq

text: knockdown control


text: live

text: Generic

text: HeLa

text: Abcam

text: Homo sapiens

text: Hela cells knockdown Med23

text: h3k36me3 si23 ChIP-Seq

characteristic: title

text: knockdown Med23


text: Epigenome Center, University of Southern California

characteristic: INSDC secondary accession

text: live

text: Generic

text: Runx2 Flag tagged

text: Sigma

text: Homo sapiens

text: Runx2 ChIP-seq


text: live

characteristic: INSDC status

text: Generic

text: none - input DNA

text: Homo sapiens

text: Input ChIP-seq


characteristic: External Id

text: China University of Geosciences

text: live

text: Generic

text: Metatranscriptome of Sphagnum moor, Shennongjia Moutain, Hubei, China

characteristic: description

text: Sphagnum palustre

text: RNA-seq of Sphagnum


text: Department of Human Genetics, Emory University School of Medicine

text: live

text: Generic

text: Mus musculus


text: Centre National de la Recherche Scientifique - Information Genomique et Structurale

text: live

text: Generic

text: Targeted resequencing in the aphid race specialied on Lotus

text: Acyrthosiphon pisum


text: live

text: Generic

text: Targeted resequencing in the aphid host race specialised on Medicago

text: Acyrthosiphon pisum


text: live

text: Generic

text: Targeted resequencing in the aphid host race specialised on Trifolium

text: Acyrthosiphon pisum


FS1: A375 parental cell line

text: Roche

text: live

text: Generic

characteristic: atcc

text: Generic

characteristic: biosamplemodel

text: FS1 is the A375 parental cell line

text: Homo sapiens

text: human melanoma cell line human cell line A375


FS2: A375R1

text: Roche

characteristic: INSDC center name

text: live

text: Generic

text: Generic

text: FS2: A375R1 BRAF resistant cell line 1

text: malignant melanoma

characteristic: disease

text: cancer

characteristic: disease type

text: Homo sapiens

characteristic: parental cell line

text: human melanoma cell line A375R1


FS3: A375R2

text: Roche

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Generic

text: FS3: A375R2 BRAF resistant cell line 2

text: malignant melanoma

text: cancer

text: Homo sapiens

text: human melanoma cell line A375R2


FS4: A375R3

text: Roche

characteristic: INSDC last update

text: live

text: Generic

text: Generic

text: FS4: A375R3 BRAF resistant cell line 3

text: malignant melanoma

text: cancer

text: Homo sapiens

characteristic: organism

text: human melanoma cell line A375R3


FS5: A375R4

text: Roche

text: live

text: Generic

text: Generic

characteristic: cell line

text: FS5: A375R4 BRAF resistant cell line 4

text: malignant melanoma

text: cancer

text: Homo sapiens

text: human melanoma cell line A375R4

characteristic: title


FS6: A375R5

text: Roche

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Generic

text: FS6: A375R5 BRAF resistant cell line 5

text: malignant melanoma

text: cancer

text: Homo sapiens

text: human melanoma cell line A375R5


FS7: A375R6

characteristic: External Id

text: Roche

text: live

text: Generic

text: Generic

text: FS7: A375R6 BRAF resistant cell line 6

characteristic: description

text: malignant melanoma

text: cancer

text: Homo sapiens

text: human melanoma cell line A375R6


text: Antonio Prudente Fundation

text: live

text: Generic

text: Homo sapiens

text: HB4a C5.2 800k sample


Theobroma caco UBC Amelonado

text: University of British Columbia

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: Lower Upper Amazon Forastero

text: Amelonado

characteristic: genotype

text: Theobroma cacao

text: Theobroma cacao genotype Amelonado


Theobroma caco UBC Criollo-22

text: University of British Columbia

characteristic: INSDC center name

text: live

text: Generic

text: Generic

text: Pure Criollo variety

text: Theobroma cacao

text: Theobroma cacao genotype Criollo-22


Theobroma caco UBC EET-64

text: University of British Columbia

text: live

text: Generic

text: Generic

text: hybrid between Upper Amazon Forastero (Nacional from Ecuador) and Trinitario (from Venezuela).

text: Theobroma cacao

text: Theobroma cacao genotype EET-64


Theobroma caco UBC ICS-01

text: University of British Columbia

text: live

text: Generic

text: Generic

text: Trinitario

text: Theobroma cacao

text: Theobroma cacao genotype ICS-01


Theobroma caco UBC ICS-06

text: University of British Columbia

text: live

text: Generic

text: Generic

text: Trinitario

text: Theobroma cacao

text: Theobroma cacao genotype ICS-06


Theobroma caco UBC ICS-39

text: University of British Columbia

text: live

text: Generic

text: Generic

text: Trinitario

text: Theobroma cacao

text: Theobroma cacao genotype ICS-39


Theobroma caco UBC Pentagonum

text: University of British Columbia

text: live

text: Generic

text: Generic

text: Trinitario (Criollo-type)

text: Pentagonum

text: Theobroma cacao

text: Theobroma cacao genotype Pentagonum


Theobroma caco UBC Scavina-6

text: University of British Columbia

text: live

text: Generic

text: Generic

text: Upper Amazon Forastero, Peru

text: Theobroma cacao

text: Theobroma cacao genotype Scavina-6


Theobroma caco UBC Stahel

text: University of British Columbia

text: live

text: Generic

text: Generic

text: Trinitario with similarities to lower Amazon Forastero

text: Stahel

text: Theobroma cacao

text: Theobroma cacao genotype Stahel


Theobroma UBC

text: University of British Columbia

text: live

text: Generic

text: Species related to T. cacao. Wild and cultivated in Amazon Basin

text: Amelonado

text: Theobroma grandiflorum

text: Theobroma grandiflorum genotype Amelonado


text: UCSD

text: live

text: Generic

text: Mus musculus

text: Frontal cortex

characteristic: strain


text: UCSD

text: live

text: Generic

text: Mus musculus

text: Frontal cortex

text: CAST/EiJ


TA3 Microbial Metagenomic Studies

text: San Diego State University

text: live

text: Generic

text: Sputum sample was collected from Cystic Fibrosis individual. Sample was named TA3 and CF4-C was used for publication (Lim et al. 2011).

text: Homo sapiens

text: CF4-B Microbial Metagenomic Studies


text: Broad Institute

text: live

characteristic: Isolate, name or label

text: Generic

text: Generic

characteristic: collection date

text: Boston [USA]

text: Female

characteristic: host sex

text: Feces (Healthy Adult)

characteristic: isolation source

text: Parabacteroides distasonis CL09T03C24

text: Parabacteroides distasonis CL09T03C24

characteristic: sample name

text: Homo sapiens

characteristic: specific host

text: Generic sample from Parabacteroides distasonis CL09T03C24


TA1 Microbial Metagenomic Studies

text: San Diego State University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Sputum sample was collected from Cystic Fibrosis individual.TA1 was used internally and CF4-A was used for publication (Lim et al. 2011).

text: Homo sapiens

characteristic: organism

text: CF4-A Microbial Metagenomic Studies


CF141-1 Microbial Metagenomic Studies

characteristic: External Id

text: San Diego State University

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Sputum sample was collected from Cystic Fibrosis individual. CF141-1 was used internally and CF5-A was used for publication (Lim et al. 2011).

characteristic: description

text: Homo sapiens

text: CF5-A Microbial Metagenomic Studies

characteristic: title


CF141-2 Microbial Metagenomic Studies

text: San Diego State University

characteristic: INSDC center name

text: live

text: Generic

text: Sputum sample was collected from Cystic Fibrosis individual. CF141-2 was used internally and CF5-B was used for publication (Lim et al. 2011).

text: Homo sapiens

text: CF5-B Microbial Metagenomic Studies


CF1A Microbial Metatranscriptomics

text: San Diego State University

text: live

text: Generic

text: terrestial biome

characteristic: biome

text: Generic

characteristic: biosamplemodel

text: lung

characteristic: body site

text: Sputum sample collected from Cystic Fibrosis individual.

text: Cystic Fibrosis

text: human-associated

characteristic: env package

text: human-associated habitat; ENVO:00009003

characteristic: feature

text: human

characteristic: host

characteristic: host taxid

text: GSC:MIMS

characteristic: keywords

text: sputum

characteristic: material

text: human metagenome

text: CF1A sputum from Cystic Fibrosis individual


CF1-B Microbial Metatranscriptomics

text: San Diego State University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: terrestial biome

text: Generic

text: lung

text: Sputum sample was collected from Cystic Fibrosis individual.

text: Cystic Fibrosis

text: human-associated

text: human-associated habitat; ENVO:00009003

text: human

text: GSC:MIMS

text: sputum

text: human metagenome

text: CF1-B sputum from Cystic Fibrosis individual


Lygus lineolaris gut

characteristic: External Id

text: North Carolina State University

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Digestive system

characteristic: description

text: Lygus lineolaris

characteristic: organism

text: gut; digestive system

characteristic: tissue

text: tarnished plant bug, Lygus lineolaris gut


CF1-C Microbial Metatranscriptomics

text: San Diego State University

characteristic: INSDC center name

text: live

text: Generic

text: terrestial biome

characteristic: biome

text: Generic

characteristic: biosamplemodel

text: lung

characteristic: body site

text: Cystic Fibrosis

text: human-associated

characteristic: env package

text: human-associated habitat; ENVO:00009003

text: human

text: GSC:MIMS

text: sputum

text: human metagenome

text: CF1-C sputum from Cystic Fibrosis individual

characteristic: title


CF2 Microbial Metatranscriptomics

text: San Diego State University

characteristic: INSDC first public

text: live

text: Generic

text: terrestial biome

text: Generic

text: lung

text: Cystic Fibrosis

text: human-associated

text: human-associated habitat; ENVO:00009003

characteristic: feature

text: human

characteristic: host

characteristic: host taxid

text: GSC:MIMS

characteristic: keywords

text: sputum

characteristic: material

text: human metagenome

text: CF2 sputum from Cystic Fibrosis individual


CF3 Microbial Metatranscriptomics

characteristic: External Id

text: San Diego State University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: terrestial biome

text: Generic

text: lung

text: Cystic Fibrosis

text: human-associated

text: human-associated habitat; ENVO:00009003

text: human

text: GSC:MIMS

text: sputum

text: human metagenome

text: CF3 sputum from Cystic Fibrosis individual


CF1-D Microbial Metatranscriptomics

text: San Diego State University

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Generic

text: terrestial biome

characteristic: biome

text: Generic

text: lung

characteristic: description

text: Cystic Fibrosis

text: human-associated

text: human-associated habitat; ENVO:00009003

text: human

text: GSC:MIMS

text: sputum

text: human metagenome

characteristic: organism

text: CF1-D sputum from Cystic Fibrosis individual


CF1-F Microbial Metatranscriptomics

text: San Diego State University

characteristic: INSDC first public

text: live

text: Generic

text: terrestial biome

text: Generic

characteristic: biosamplemodel

text: lung

characteristic: body site

text: Cystic Fibrosis

text: human-associated

characteristic: env package

text: human-associated habitat; ENVO:00009003

text: human

text: GSC:MIMS

text: sputum

text: human metagenome

text: CF1-F sputum from Cystic Fibrosis individual

characteristic: title


CF4-B Microbial Metatranscriptomics

text: San Diego State University

text: live

text: Generic

text: terrestial biome

text: Generic

text: lung

text: CF4-B Microbial Metatranscriptomic. Sputum was collected from CF154 patient at time point D (02/01/2011). Detailed experimental design is published in Lim et al. 2011. Sample was split into three parts, (i) Ambion MICROBEnrich and MICROExpress kit microbial mRNA enrichment, (ii) Ribo-Zero Meta Kit human and microbial rRNA removal, and (iii) no rRNA removal. cDNA was generated using the Whole Transcriptome Amplification kit (WTA2).

text: Cystic Fibrosis

text: human-associated

text: human-associated habitat; ENVO:00009003

characteristic: feature

text: human

characteristic: host

characteristic: host taxid

text: GSC:MIMS

characteristic: keywords

text: sputum

characteristic: material

text: human metagenome

text: CF4-B sputum from Cystic Fibrosis individual


CF4-C Microbial Metatranscriptomics

characteristic: External Id

text: San Diego State University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: terrestial biome

text: Generic

text: lung

text: Cystic Fibrosis

text: human-associated

text: human-associated habitat; ENVO:00009003

text: human

text: GSC:MIMS

text: sputum

text: human metagenome

text: CF4-C sputum from Cystic Fibrosis individual


TA1 Microbial Metatranscriptomics

text: San Diego State University

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Generic

characteristic: SRA accession

text: terrestial biome

characteristic: biome

text: Generic

text: lung

text: Tracheal aspirate sample was collected from Cystic Fibrosis individual. TA1 was used internally and CF4-A was used in the publication (Lim et al. 2011).

characteristic: description

text: Cystic Fibrosis

text: human-associated

text: human-associated habitat; ENVO:00009003

text: human

text: GSC:MIMS

text: sputum

text: human metagenome

text: CF4-A sputum from Cystic Fibrosis individual


Lygus lineolaris whole body

text: North Carolina State University

characteristic: INSDC first public

text: live

text: Generic

text: Lygus lineolaris

characteristic: organism

text: whole body

characteristic: tissue

text: tarnished plant bug, Lygus lineolaris whole body


text: College of life science, Anhui agricultural university

text: live

text: Generic

text: Zongcaixuan No.1

characteristic: cultivar

text: seedling

characteristic: dev-stage

text: Gossypium hirsutum

text: leaf

characteristic: tissue-type

text: Brown cotton seedlings in response to low temperature library

characteristic: title


Sub1Muc 052310

characteristic: External Id

text: University of Connecticut

text: live

text: Generic

text: Subjects were enrolled via a protocol approved by the University of Connecticut Health Center Institutional Review Board. Criteria for inclusion of subjects included being 21 years of age or older and willing and able to provide informed consent. No subject had been diagnosed with a systemic disease or was regularly taking any medication except multivitamin supplements. All subjects had at least 25 teeth and were in good oral health, defined by the absence of mucosal disease, no visible caries lesions or periodontal disease defined by a Community Periodontal Index of Treatment Needs greater or equal to 2 in any sextant of the mouth, and with all teeth present evaluated at six sites. Additionally, no subject had taken systemic antibiotics within 2 months before sampling or used commercial probiotic supplements (greater than or equal to 108 organisms per day). Subjects were instructed not to perform any oral hygiene habits for 4 hours prior to sampling. A mucosal swab sample was collected by passing a single CatchAllTM swab through the entire area of the right and left buccal mucosa for a 10 second period. The swab was immediately swirled in a tube containing 500 uL of TE buffer (20 mM Tris pH 7.4, 2 mM EDTA) and pressed against the tube walls to transfer the material to the solution, which was stored at -80°C. DNA was isolated by mixing the TE-resuspended sample with lysozyme (final concentration of 20 mg mL-1) followed by incubation at 37°C for 30 minutes. This was followed by addition of buffer AL and Proteinase K (final concentration 1.23 mg mL-1) and incubation at 56°C overnight. Samples were then incubated at 95°C for 5 minutes and DNA isolated using a commercially available kit according to the instructions of the manufacturer (Qiagen, Valencia, CA; DNeasy Blood and Tissue kit). DNA was eluted in MD5 solution (MoBio Laboratories, Carlsbad, CA).

text: human metagenome

text: 16S rDNA v12 Subject 1 Mucosa


Sub1Sal 052310

text: University of Connecticut

characteristic: INSDC last update

text: live

text: Generic

text: Subjects were enrolled via a protocol approved by the University of Connecticut Health Center Institutional Review Board. Criteria for inclusion of subjects included being 21 years of age or older and willing and able to provide informed consent. No subject had been diagnosed with a systemic disease or was regularly taking any medication except multivitamin supplements. All subjects had at least 25 teeth and were in good oral health, defined by the absence of mucosal disease, no visible caries lesions or periodontal disease defined by a Community Periodontal Index of Treatment Needs greater or equal to 2 in any sextant of the mouth, and with all teeth present evaluated at six sites. Additionally, no subject had taken systemic antibiotics within 2 months before sampling or used commercial probiotic supplements (greater than or equal to 108 organisms per day). Subjects were instructed not to perform any oral hygiene habits for 4 hours prior to sampling. Unstimulated saliva was collected by allowing saliva to flow freely for 5 minutes over a polypropylene tube. Saliva samples were immediately centrifuged at 6,000 x g and pellets stored at -80°C until further processed. DNA was isolated by mixing the resuspended sample with lysozyme (final concentration of 20 mg mL-1) followed by incubation at 37°C for 30 minutes. This was followed by addition of buffer AL and Proteinase K (final concentration 1.23 mg mL-1) and incubation at 56°C overnight. Samples were then incubated at 95°C for 5 minutes and DNA isolated using a commercially available kit according to the instructions of the manufacturer (Qiagen, Valencia, CA; DNeasy Blood and Tissue kit). DNA was eluted in MD5 solution (MoBio Laboratories, Carlsbad, CA).

text: human metagenome

text: 16S rDNA v12 Subject 1 Saliva


Sub3MucB 052310

text: University of Connecticut

characteristic: INSDC secondary accession

text: live

text: Generic

text: human metagenome

text: 16S rDNA v12 Subject 3 Mucosa B


Sub3SalB 052310

text: University of Connecticut

text: live

text: Generic

characteristic: NCBI submission model

text: human metagenome

text: 16S rDNA v12 Subject 3 Saliva B


digital gene expression

text: College of Bioinformation, Chongqing University of Posts and Telecommunications, Chongqing , China

text: live

text: Generic

characteristic: NCBI submission package

text: The stems of Dayejie were collected 22 weeks after seeding (daye3bianzhong). (Brassica juncea var. tumida Tsen et Lee)

text: Brassica juncea var. tumida

text: stem

text: Brassica juncea var. tumida stem 22 week


digital gene expression(yongan1hao)

characteristic: INSDC center name

text: live

text: Generic

text: The stems of Yong’an were collected 18 seeding (yongan1hao, uninflated).(Brassica juncea var. tumida Tsen et Lee)

text: Brassica juncea


digital gene expression(yongan2hao)

text: live

characteristic: INSDC status

text: Generic

text: The stems of Yong’an were collected 20 weeks after seeding (yongan2hao, one week before the start of inflation).(Brassica juncea var. tumida Tsen et Lee)

text: Brassica juncea


digital gene expression (yongan3hao)

text: live

text: Generic

characteristic: SRA accession

text: The stems of Yong’an were collected 22 weeks after seeding (yongan3hao, one week after the start of inflation).(Brassica juncea var. tumida Tsen et Lee)

text: Brassica juncea


digital gene expression (yongan4hao)

text: live

text: Generic

text: The stems of Yong’an were collected 25 weeks after seeding (yongan4hao, one month after the start of inflation). (Brassica juncea var. tumida Tsen et Lee)

text: Brassica juncea


digital gene expression (Yongan23gen)

text: live

text: Generic

text: The mix roots of Yong’an were collected 20 and 22 weeks after seeding (one week before the start of inflation and one week after the start of inflation). (Brassica juncea var. tumida Tsen et Lee)

text: Brassica juncea


transcriptome

text: live

text: Generic

text: a pooled RNA sample including different developmental stages (stems of yongan1hao, yongan2hao, yongan3hao, and yongan4hao) was used for transcriptome analysis.The stems of Yong’an were collected 18, 20, 22, and 25 weeks after seeding (respectively: yongan1hao, uninflated; yongan2hao, one week before the start of inflation; yongan3hao, one week after the start of inflation; and yongan4hao, one month after the start of inflation).

text: Brassica juncea

text: transcriptome


text: Research Technology Support Facility at Michigan State University

text: live

text: Generic

text: Tropaeolum majus

text: 13 DPA


text: live

text: Generic

text: Tropaeolum majus

text: 16 DPA


text: live

text: Generic

text: Tropaeolum majus

text: 17 DPA


text: live

text: Generic

text: Tropaeolum majus

text: 18 DPA


text: live

text: Generic

text: Tropaeolum majus

text: 21 DPA


text: live

text: Generic

text: Tropaeolum majus

text: 25 DPA


text: Joint Genome Institute, U.S. Department of Energy

text: live

text: Generic

text: Pichia membranifaciens NRRL Y-2026

text: Pichia membranifaciens NRRL Y-2026

text: NRRL Y-2026

characteristic: strain

text: Generic sample from Pichia membranifaciens NRRL Y-2026


text: dbGaP

text: live

text: Generic

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: GRU

text: Yes

characteristic: is technical control

text: Homo sapiens

text: female

characteristic: sex

text: Case-Control

characteristic: study design

characteristic: study name

text: No

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Sample from a human female participant in the dbGaP study Genome-Wide Association Study of Celiac Disease


characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Saitoella complicata NRRL Y-17804

characteristic: description

text: Saitoella complicata NRRL Y-17804

characteristic: organism

text: NRRL Y-17804

text: Generic sample from Saitoella complicata NRRL Y-17804

characteristic: title


characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Candida caseinolytica Y-17796

text: Tortispora caseinolytica NRRL Y-17796

text: NRRL Y-17796

characteristic: strain

text: Generic sample from Candida caseinolytica NRRL Y-17796


text: Beijing Institute of Genomics

text: live

text: Generic

characteristic: collection date

text: This sample is L-3 with RPW larvae collected in March.

text: larvae

characteristic: dev stage

text: Rhynchophorus ferrugineus

text: red palm weevil larvae, L-3


text: Beijing Institute of Genomics

text: live

text: Generic

text: This sample is L-7 with RPW larvae collected in July.

text: larvae

text: Rhynchophorus ferrugineus

text: red palm weevil larvae, L-7


text: Beijing Institute of Genomics

text: live

text: Generic

text: This sample is L-11 with RPW larvae collected in November.

text: larvae

text: Rhynchophorus ferrugineus

text: red palm weevil larvae, L-11


A-S

text: Beijing Institute of Genomics

text: live

text: Generic

text: 2011-03; 2011-05

text: This sample is A-S with RPW adults collected in March and May.

text: adult

text: Rhynchophorus ferrugineus

text: >red palm weevil adults, A-S


text: Beijing Institute of Genomics

text: live

text: Generic

text: This sample is L-5 with RPW larvae collected in May.

text: larvae

text: Rhynchophorus ferrugineus

text: red palm weevil larvae, L-5


L-LT

text: Beijing Institute of Genomics

text: live

text: Generic

text: This sample is L-LT for larvae reared in lab at low temperature of 20℃.

text: larvae

text: Rhynchophorus ferrugineus

characteristic: temperature

text: 20 deg c lab-reared red palm weevil larvae, L-LT


L-HT

text: Beijing Institute of Genomics

text: live

text: Generic

text: This sample is L-HT for larvae reared in lab at high temperature of 32℃.

text: larvae

text: Rhynchophorus ferrugineus

text: high temp lab-reared red palm weevil larvae, L-HT


text: Beijing Institute of Genomics

text: live

text: Generic

text: This sample is L-M0.5 for larvae reared from eggs in lab and sampled at 0.5 month post hatch.

text: larvae

text: Rhynchophorus ferrugineus

text: lab-reared red palm weevil larvae. .5 month post hatch, L-LT


text: Beijing Institute of Genomics

text: live

text: Generic

text: This sample is L-M1 for larvae reared from eggs in lab and sampled at 1 month post hatch.

text: larvae

text: Rhynchophorus ferrugineus

text: lab-reared red palm weevil larvae. 1 month post hatch, L-LT


text: Beijing Institute of Genomics

text: live

text: Generic

text: This sample is L-M1.5 for larvae reared from eggs in lab and sampled at 1.5 months post hatch.

text: larvae

text: Rhynchophorus ferrugineus

text: lab-reared red palm weevil larvae. 1.5 month post hatch, L-LT


text: Beijing Institute of Genomics

text: live

text: Generic

text: This sample is L-M2 for larvae reared from eggs in lab and sampled at 2 months post hatch.

text: larvae

text: Rhynchophorus ferrugineus

text: lab-reared red palm weevil larvae. 2 month post hatch, L-LT


text: Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences

text: live

text: Generic

text: Generic

characteristic: biosamplemodel

text: China: Dianchi

characteristic: country

text: #SampleID BarcodeSequence LinkerPrimerSequence Sites Description #These 8 samples are from Dianchi #Sediment sample 16S.1 ATGCTACGTC TTACCGCGGCTGCTGGCAC Caohai Caohai_Jun. 16S.2 ATGTGACTAC TTACCGCGGCTGCTGGCAC Waihai waihai_Jun. 16S.3 CACGAGACAG TTACCGCGGCTGCTGGCAC Caohai Caohai_Sep. 16S.4 CACGCGAGTC TTACCGCGGCTGCTGGCAC Waihai Waihai_Sep. 16S.5 CACGCTACGA TTACCGCGGCTGCTGGCAC Caohai Caohai_Dec. 16S.6 CACGTGTATA TTACCGCGGCTGCTGGCAC Waihai Waihai_Dec. 16S.7 CACTACGATG TTACCGCGGCTGCTGGCAC Caohai Caohai_Mar. 16S.8 CACTATACTC TTACCGCGGCTGCTGGCAC Waihai Waihai_Mar.

text: metagenome

characteristic: environment (biome)

text: lake

characteristic: environment (feature)

text: sediment

characteristic: environment (material)

text: uncultured bacterium

text: Season Effect on Bacterial Community in the Sediments of a Two-separated Eutrophic Lake: Dianchi, China


characteristic: External Id

text: Catalan Institute for Water Research (ICRA)

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Bacteria

text: Effect of ciprofloxacin on plasmid-mediated antibiotic resistance and associated bacterial community shifts in water supply reservoirs


text: Madurai Kamaraj University

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Generic

text: sludge

characteristic: biome

text: Generic

text: Andaman Sea Pelagic Sediment; sludge

characteristic: description

text: GSC:MIMARKS

characteristic: keywords

text: sediment metagenome

characteristic: organism

text: Metagenomics of the Andaman Sea Pelagic Sediment

characteristic: title