characteristic: External Id

text: other (flavoring or seasoning)

characteristic: IFSAC Category

text: FDA

characteristic: INSDC last update

text: live

text: Pathogen.env

text: FDA

characteristic: collected by

characteristic: fda lab id

text: USA: RI

characteristic: geo loc name

text: FDA_2010_145_Black Pepper-5

characteristic: isolate

text: peppercorn

characteristic: isolation source

text: PMID: 21345093

text: Montevideo

characteristic: serovar

text: Food

characteristic: source type

text: enterica

characteristic: sub species

text: Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3


status: PUBLIC

text: clinical/research, human

tag: attribute

characteristic: IFSAC+ Category

text: FDA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIGS:3.0

characteristic: description

text: stool

characteristic: environment (material)

text: Homo sapiens

characteristic: host

characteristic: investigation type

text: clinical isolate

characteristic: isolate type

text: stool

characteristic: ontological term

characteristic: organism

characteristic: project name

text: PMID: 21345093

characteristic: reference for biomaterial

text: Montevideo

text: Human

characteristic: strain

text: enterica

text: MIGS Cultured Bacterial/Archaeal sample from Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199

characteristic: title


characteristic: External Id

text: multi-ingredient, meat

characteristic: IFSAC Category

text: Food and Drug Administration, Center for Food Safety and Applied Nutrition

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: 0908ORJIX-1 Pepper Salami Outbreak

characteristic: Outbreak

text: FDA

characteristic: collected by

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:3.0

text: USA:IA

characteristic: geo loc name

text: FDA_2010_237_Lunch Meat-IA-1

text: lunch meat

characteristic: isolation source

text: luncheon meat:FOODON_03310675

characteristic: pfge primary enzyme pattern

text: PMID: 21345093

text: Montevideo

characteristic: serovar

text: Food

characteristic: source type

text: enterica

characteristic: subspecies

text: Pathogen sample for Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282


FDA_2010_238_Lunch Meat-IA-3

text: FDA

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: lunch meat

characteristic: environment (material)

characteristic: investigation type

text: FDA_2010_238_Lunch Meat-IA-3

characteristic: isolate

text: lunch meat

characteristic: isolation-source

characteristic: organism

characteristic: project name

text: PMID: 21345093

characteristic: reference for biomaterial

text: Montevideo

text: enterica

characteristic: sub species

text: MIGS Cultured Bacterial/Archaeal sample from Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283


FDA_2010_239_Lunch Meat-IA-2

characteristic: External Id

text: multi-ingredient, meat

characteristic: IFSAC Category

text: FDA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:3.0

text: lunch meat

text: FDA_2010_239_Lunch Meat-IA-2

text: lunch meat

characteristic: isolation source

text: luncheon meat:FOODON_03310675

characteristic: ontological term

text: PMID: 21345093

text: Montevideo

characteristic: serovar

text: Food

characteristic: strain

text: enterica

text: MIGS Cultured Bacterial/Archaeal sample from Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284

characteristic: title


FDA_2010_240_Lunch Meat-IA-4

text: multi-ingredient, meat

text: FDA

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIGS:3.0

characteristic: description

text: lunch meat

characteristic: environment (material)

characteristic: investigation type

text: FDA_2010_240_Lunch Meat-IA-4

characteristic: isolate

text: lunch meat

text: luncheon meat:FOODON_03310675

text: PMID: 21345093

text: Montevideo

text: Food

characteristic: source type

text: enterica

text: MIGS Cultured Bacterial/Archaeal sample from Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285


FDA_2010_242_Lunch Meat-IA-5

characteristic: External Id

text: multi-ingredient, meat

characteristic: IFSAC Category

text: FDA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: Keywords: GSC:MIxS;MIGS:3.0

text: lunch meat

text: FDA_2010_242_Lunch Meat-IA-5

text: lunch meat

text: luncheon meat:FOODON_03310675

characteristic: organism

characteristic: project name

text: PMID: 21345093

characteristic: reference for biomaterial

text: Montevideo

text: Food

text: enterica

characteristic: sub species

text: MIGS Cultured Bacterial/Archaeal sample from Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287


text: other (flavoring or seasoning)

text: FDA

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: FDA

characteristic: collected by

characteristic: fda lab id

text: USA: RI

characteristic: geo loc name

text: FDA_2010_146_Black Pepper-7

text: peppercorn

characteristic: isolation source

characteristic: ontological term

text: PMID: 21345093

text: Montevideo

characteristic: serovar

text: Food

characteristic: strain

text: enterica

text: Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4

characteristic: title


FDA_2010_147_Black Pepper-3

characteristic: External Id

text: other (flavoring or seasoning)

characteristic: IFSAC Category

text: FDA

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:3.0

characteristic: description

text: Piper nigrum

characteristic: host

characteristic: investigation type

text: FDA_2010_147_Black Pepper-3

characteristic: isolate

text: peppercorn

text: PMID: 21345093

text: Montevideo

text: Food

characteristic: source type

text: enterica

text: MIGS Cultured Bacterial/Archaeal sample from Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1


FDA_2010_148_Black Pepper-4

text: NCBI

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Keywords: GSC:MIxS;MIGS:3.0

text: Piper nigrum

text: FDA_2010_148_Black Pepper-4

characteristic: organism

characteristic: project name

text: PMID: 21345093

characteristic: reference for biomaterial

text: Montevideo

text: enterica

characteristic: sub species

text: MIGS Cultured Bacterial/Archaeal sample from Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2


characteristic: External Id

text: FDA

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:5.0

text: stool

characteristic: environment (material)

text: Homo sapiens

text: stool

characteristic: isolation-source

text: clinical isolate

text: PMID: 21345093

text: Montevideo

characteristic: serovar

characteristic: strain

text: enterica

text: MIGS Cultured Bacterial/Archaeal sample from Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054

characteristic: title


text: FDA

text: live

text: MIGS.ba

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: stool

text: Homo sapiens

characteristic: host

characteristic: investigation type

characteristic: isolate

text: clinical isolate

characteristic: isolate type

text: stool

text: PMID: 21345093

text: Montevideo

text: enterica

text: MIGS Cultured Bacterial/Archaeal sample from Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675


text: University of Aveiro

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Enchytraeus albidus

characteristic: organism

text: whole body

characteristic: tissue-type

text: Enchytraeus albidus pesticide enriched library (SSH)


characteristic: External Id

text: Northwest A & F University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: The total RNA was prepared from skin at hair follicle anagen and categen, and the SSH cDNA library was constructed by PCR-Select cDNA Subtraction Kit of CLONTECH (Cat.No.637401).

text: anagen-catagen transition

characteristic: dev-stage

text: skin

characteristic: organ

text: Capra hircus

text: Rsa I

text: male

characteristic: sex

text: skin

text: Goat hair follicle anagen-catagen transition SSH library

text: pGEM-Teasy

characteristic: vector


text: Beijing Forestry University

text: live

text: Generic

characteristic: NCBI submission package

text: Populus hopeiensis

text: female

text: Differentially expressed TDF library of Populus hopeiensis response to drought stress

characteristic: title


text: U.C. Berkeley

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: Heterozygous progeny from cross of A5G3 and B3-1

characteristic: description

text: Drosophila melanogaster

text: A5G3, P{mw , ubi-GFP.nls}, FRT40A/B3-1, P{mw , ubi-GFP.nls}, FRT40A


text: U.C. Berkeley

characteristic: INSDC last update

text: live

text: Generic

text: Heterozygous progeny from cross of A4B5 and A5G3

text: Drosophila melanogaster

text: A4B5, P{mw , ubi-GFP.nls}, FRT40A/A5G3, P{mw , ubi-GFP.nls}, FRT40A


text: U.C. Berkeley

text: live

characteristic: INSDC status

text: Generic

text: Heterozygous progeny from cross of A4B5 and B3-1

text: Drosophila melanogaster

text: A4B5, P{mw , ubi-GFP.nls}, FRT40A/B3-1, P{mw , ubi-GFP.nls}, FRT40A


text: Institute for Genome Sciences University of MD School of Medicine

text: live

text: Generic

characteristic: NCBI submission model

text: Yersinia pestis PY-02

characteristic: strain

text: Yersinia pestis PY-02


name: PRJNA28331.Actinomyces neuii subsp. Anitratus BVS029A5

text: Broad Institute

text: live

text: Generic

text: female

characteristic: host sex

text: Winkia neuii BV029A5

characteristic: organism

characteristic: sample name

text: Generic sample from Actinomyces neuii BVS029A5


characteristic: External Id

text: Broad Institute

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: bi gssr sample id

characteristic: bi gssr sample lsid

text: Genomic DNA

characteristic: bi gssr sample type

text: Plasmodium vivax India VII

text: India VII

characteristic: sample id

text: India VII

text: Blood

characteristic: tissue source

text: Plasmodium vivax India VII Genomic DNA sample 32925.0


PRJNA65119.India VII

text: Broad Institute

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Blood

characteristic: isolation source

text: Plasmodium vivax India VII

text: India VII

text: India VII

text: Generic sample from Plasmodium vivax India VII

characteristic: title


text: Marine Biological Laboratory

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: ammonium

characteristic: chlorophyll

characteristic: collection date

text: French Polynesia

characteristic: country

characteristic: density

characteristic: depth

characteristic: depth end

characteristic: depth start

text: top 50 m

characteristic: diss_org_carb [estimated value]

characteristic: environment

text: marine biome [ENVO:00000447]

text: marine habitat [ENVO:00000569]

text: sea water [ENVO:00002149]

characteristic: fluorescence

text: offshore area [ENVO:00000090]

characteristic: lat

characteristic: lat lon

characteristic: lon

text: Offshore 1, 5K Offshore

text: water column

characteristic: material type

text: South Pacific

text: marine metagenome

characteristic: phosphate

text: oxic

characteristic: salinity

text: summer;rainy season

characteristic: season

characteristic: silicate

characteristic: temp


characteristic: External Id

text: Marine Biological Laboratory

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: chlorophyll

characteristic: collection date

text: French Polynesia

characteristic: country

text: top 50 m

text: marine biome [ENVO:00000447]

text: marine habitat [ENVO:00000569]

text: sea water [ENVO:00002149]

text: offshore area [ENVO:00000090]

text: 40 nautical miles North of Oponohu Bay, Moorea

text: water column

text: South Pacific

text: marine metagenome

characteristic: organism

text: oxic

text: summer;rainy season

characteristic: title


text: Marine Biological Laboratory

text: live

text: Generic

text: French Polynesia

characteristic: density

characteristic: depth

characteristic: depth end

characteristic: depth start

text: top 50 m

characteristic: environment

text: marine biome [ENVO:00000447]

text: marine habitat [ENVO:00000569]

text: sea water [ENVO:00002149]

characteristic: fluorescence

text: offshore area [ENVO:00000090]

characteristic: lat

characteristic: lat lon

characteristic: lon

text: 60 miles North of Moorea, heading West

text: water column

characteristic: material type

text: South Pacific

text: marine metagenome

characteristic: phosphate

text: oxic

characteristic: salinity

text: summer;rainy season

characteristic: season


characteristic: External Id

text: Marine Biological Laboratory

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: ammonium

characteristic: chlorophyll

characteristic: collection date

text: French Polynesia

text: top 50 m

characteristic: diss_org_carb [estimated value]

text: marine biome [ENVO:00000447]

text: marine habitat [ENVO:00000569]

text: sea water [ENVO:00002149]

text: Paopao Bay

text: Cooks Bay

text: water column

text: South Pacific

text: marine metagenome

text: oxic

text: summer;rainy season

characteristic: silicate

characteristic: temp


text: Marine Biological Laboratory

text: live

text: Generic

text: French Polynesia

characteristic: country

characteristic: density

characteristic: depth

characteristic: depth end

characteristic: depth start

text: top 50 m

characteristic: environment

text: marine biome [ENVO:00000447]

text: marine habitat [ENVO:00000569]

text: sea water [ENVO:00002149]

characteristic: fluorescence

text: Fore Reef

characteristic: lat

characteristic: lat lon

characteristic: lon

text: LTER 1

text: water column

characteristic: material type

text: South Pacific

text: marine metagenome

characteristic: organism

characteristic: phosphate

text: oxic

characteristic: salinity

text: summer;rainy season

characteristic: title


characteristic: External Id

text: Marine Biological Laboratory

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: chlorophyll

characteristic: collection date

text: French Polynesia

text: top 50 m

text: marine biome [ENVO:00000447]

text: marine habitat [ENVO:00000569]

text: sea water [ENVO:00002149]

text: offshore area [ENVO:00000090]

text: 1 mile North of Oponohu Bay, Moorea

text: water column

text: South Pacific

text: marine metagenome

text: oxic

text: summer;rainy season

characteristic: season


text: Marine Biological Laboratory

text: live

text: Generic

characteristic: ammonium

text: French Polynesia

characteristic: country

characteristic: density

characteristic: depth

characteristic: depth end

characteristic: depth start

text: top 50 m

characteristic: diss_org_carb [estimated value]

characteristic: environment

text: marine biome [ENVO:00000447]

text: marine habitat [ENVO:00000569]

text: sea water [ENVO:00002149]

characteristic: fluorescence

text: fringing reef [ENVO:00000130]

characteristic: lat

characteristic: lat lon

characteristic: lon

text: Fringe 1

text: water column

characteristic: material type

text: South Pacific

text: marine metagenome

text: oxic

text: summer;rainy season

characteristic: silicate

characteristic: temp


characteristic: External Id

text: Marine Biological Laboratory

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: chlorophyll

characteristic: collection date

text: French Polynesia

text: top 200 m

text: marine biome [ENVO:00000447]

text: marine habitat [ENVO:00000569]

text: sea water [ENVO:00002149]

text: offshore area [ENVO:00000090]

text: 1 mile North of Oponohu Bay, Moorea

text: water column

text: South Pacific

text: marine metagenome

characteristic: organism

characteristic: phosphate

text: oxic

characteristic: salinity

text: summer;rainy season

characteristic: title


text: Marine Biological Laboratory

text: live

text: Generic

text: marine metagenome


text: Broad Institute

text: live

text: Generic

text: 025 [Germany]

text: Plasma:Plasma

characteristic: isolation source

text: Human immunodeficiency virus 1

characteristic: sample name

text: Human immunodeficiency virus 1

characteristic: specific host

text: Generic sample from Human immunodeficiency virus 1


characteristic: External Id

text: Marine Biological Laboratory

characteristic: INSDC center name

text: live

text: Generic

text: French Polynesia

characteristic: country

characteristic: density

characteristic: depth

characteristic: depth end

characteristic: depth start

characteristic: diss_org_carb [estimated value]

characteristic: environment

text: marine biome [ENVO:00000447]

text: marine habitat [ENVO:00000569]

text: sea water [ENVO:00002149]

text: offshore area [ENVO:00000090]

characteristic: lat

characteristic: lat lon

characteristic: lon

text: 60K offshore

text: water column

characteristic: material type

text: South Pacific

text: marine metagenome

text: oxic

characteristic: temp


text: Marine Biological Laboratory

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: collection date

text: French Polynesia

text: marine biome [ENVO:00000447]

text: marine habitat [ENVO:00000569]

text: sea water [ENVO:00002149]

text: Paopao Bay

text: Paopao Bay

text: water column

text: South Pacific

text: marine metagenome

characteristic: organism

text: oxic

characteristic: title


characteristic: External Id

text: Marine Biological Laboratory

characteristic: INSDC center name

text: live

text: Generic

text: French Polynesia

characteristic: country

characteristic: depth

characteristic: depth end

characteristic: depth start

characteristic: diss_org_carb [estimated value]

text: marine biome [ENVO:00000447]

text: marine habitat [ENVO:00000569]

text: sea water [ENVO:00002149]

text: Fore-reef

text: fore-reef

text: water column

text: South Pacific

text: marine metagenome

text: oxic


text: Marine Biological Laboratory

characteristic: INSDC first public

text: live

text: Generic

text: French Polynesia

characteristic: density

characteristic: environment

text: marine biome [ENVO:00000447]

text: marine habitat [ENVO:00000569]

text: sea water [ENVO:00002149]

text: offshore area [ENVO:00000090]

characteristic: lat

characteristic: lat lon

characteristic: lon

text: 5K offshore west

text: water column

characteristic: material type

text: South Pacific

text: marine metagenome

characteristic: phosphate

text: oxic

characteristic: salinity

characteristic: temp


characteristic: External Id

text: Marine Biological Laboratory

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: collection date

text: French Polynesia

text: marine biome [ENVO:00000447]

text: marine habitat [ENVO:00000569]

text: sea water [ENVO:00002149]

text: lagoon [ENVO:00000038]

text: back-reef

text: water column

text: South Pacific

text: marine metagenome

characteristic: organism

text: oxic

characteristic: title


text: Marine Biological Laboratory

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: French Polynesia

characteristic: country

characteristic: density

characteristic: depth

characteristic: depth end

characteristic: depth start

characteristic: diss_org_carb [estimated value]

characteristic: environment

text: marine biome [ENVO:00000447]

text: marine habitat [ENVO:00000569]

text: sea water [ENVO:00002149]

text: offshore area [ENVO:00000090]

characteristic: lat

text: 60K offshore

text: water column

text: South Pacific

text: marine metagenome

text: oxic


characteristic: External Id

text: Marine Biological Laboratory

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: French Polynesia

text: marine biome [ENVO:00000447]

text: marine habitat [ENVO:00000569]

text: sea water [ENVO:00002149]

text: fringing reef [ENVO:00000130]

characteristic: lat lon

characteristic: lon

text: fringing reef [ENVO:00000130]

text: water column

characteristic: material type

text: South Pacific

text: marine metagenome

text: oxic


text: Marine Biological Laboratory

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: collection date

text: French Polynesia

text: marine biome [ENVO:00000447]

text: marine habitat [ENVO:00000569]

text: sea water [ENVO:00002149]

text: offshore area [ENVO:00000090]

text: 5K offshore west

text: water column

text: South Pacific

text: marine metagenome

characteristic: organism

characteristic: phosphate

text: oxic

characteristic: salinity

characteristic: temp

characteristic: title


characteristic: External Id

text: Joint Genome Institute, U.S. Department of Energy

characteristic: INSDC first public

text: live

text: Generic

text: Thiorhodococcus drewsii AZ1

characteristic: description

text: Thiorhodococcus drewsii AZ1

characteristic: strain

text: Generic sample from Thiorhodococcus drewsii AZ1


characteristic: GOLD Stamp ID

text: Prodigal

characteristic: Gene Calling Method

text: Gram+

characteristic: Gram Staining

text: NCBI

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Nonsporulating

characteristic: Sporulation

text: Yes

characteristic: Type Strain

text: free living

characteristic: biotic relationship

text: Rod-shaped

characteristic: cell shape

text: Greece

characteristic: country

text: Keywords: GSC:MIGS:2.1

text: Soil

characteristic: environment

characteristic: investigation type

text: Creosote polluted soil at Perivleptos (Epirus, Greece)

characteristic: isolation site

text: creosote-polluted soil

characteristic: isolation-source

text: 39.789 N 20.781 E

characteristic: lat lon

text: Nonmotile

characteristic: motility

text: 44113 Sanger, 599557 pyrosequencing.

characteristic: number of reads

text: Pseudarthrobacter phenanthrenivorans Sphe3

text: Arthrobacter phenanthrenivorans Sphe3

characteristic: project name

text: DSM 18606

text: aerobe

characteristic: temperature optimum

text: Mesophile

characteristic: temperature range

text: Arthrobacter phenanthrenivorans Sphe3 plasmid pASPHE302, complete sequence.

text: type strain of Pseudarthrobacter phenanthrenivorans

characteristic: type material


characteristic: External Id

text: National Institute of Plant Genome Research

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: cultivar

text: cDNA library cloned into TOPO plasmid vector

characteristic: description

text: Cicer arietinum

characteristic: organism

text: embryo

characteristic: tissue-type

text: Cicer arietinum six day old embryo cDNA library

characteristic: title


characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: Marichromatium purpuratum 987

text: Marichromatium purpuratum 984

characteristic: strain

text: Generic sample from Marichromatium purpuratum 984


RK

text: Oil Crops Research Institute

text: live

text: Generic

text: Brassica napus

text: RK sample


SK

text: Oil Crops Research Institute

text: live

text: Generic

text: Brassica napus

text: SK samples


Odontotermes yunnanensis gut metagenome

text: Institute of Plant Physiology and Ecology, China

text: live

text: Generic

characteristic: collection date

text: China: Xishuangbanna, Yunnan Province

characteristic: country

text: This sample is derived from the whole gut microbiome of 2000 workers of Odontotermes yunnanensis: a kind of fungus-growing termite sampled in Xishuangbanna, Yunnan Province, P. R. China in March 2008.

text: GSC:MIMS/MIMARKS

characteristic: keywords

text: termite gut metagenome

text: Odontotermes yunnanensis gut metagenome


characteristic: External Id

text: IGB Berlin

characteristic: INSDC center name

text: live

text: Generic

text: Dictyostelium discoideum

text: transcriptome analysis of D. discoideum NC4


text: DOE-CSP 2010

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Prodigal 1.4, GenePRIMP

characteristic: Gene Calling Method

text: NCBI

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Russia

text: Keywords: GSC:MIGS:2.1

characteristic: investigation type

text: Norilsk, Russia

characteristic: isolation site

text: 69.372 N 88.235 E

characteristic: lat lon

characteristic: number of reads

text: Acidithiobacillus ferrivorans SS3

characteristic: ph

text: Acidithiobacillus ferrivorans SS3

characteristic: project name

text: Psychrotolerant

characteristic: temperature range

text: Acidithiobacillus ferrivorans SS3, complete genome.


text: Gram-

characteristic: Gram Staining

text: NCBI

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Yes

characteristic: Type Strain

text: free living

characteristic: biotic relationship

text: Rod-shaped

characteristic: cell shape

text: Peru

text: 252 meters

characteristic: depth

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Deep sea, Sediment, Soil

characteristic: environment

text: Deep sea sediments (252 m below sea level) of Peru Margin collected during Leg 201 of the Ocean Drilling Program

text: deep sea sediment

characteristic: isolation-source

text: Motile

characteristic: motility

text: Thermosediminibacter oceani DSM 16646

characteristic: organism

text: 6.3 - 9.3

text: Barophile

characteristic: phenotypes

text: Thermosediminibacter oceani JW/IW-1228P, DSM 16646

text: DSM 16646, ATCC BAA-1034

text: anaerobe

text: DSM 16646

characteristic: strain

text: 52 - 76C

characteristic: temperature optimum

text: Thermophile

text: Thermosediminibacter oceani DSM 16646, complete genome.

characteristic: title

text: type strain of Thermosediminibacter oceani

characteristic: type material


characteristic: External Id

characteristic: GOLD Stamp ID

text: Gram-

characteristic: Gram Staining

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Nonsporulating

characteristic: Sporulation

text: free living

text: Rod-shaped

text: USA

characteristic: country

text: Keywords: GSC:MIGS:2.1

text: Hot spring

text: Fresh water, Hot spring

characteristic: habitat

characteristic: investigation type

text: Obsidian Pool, Yellowstone National Park, Wyoming, USA

characteristic: isolation site

text: 44.630844 N 110.440292 W

characteristic: lat lon

text: Caldicellulosiruptor obsidiansis OB47

characteristic: ph

text: Caldicellulosiruptor sp. OB47

characteristic: project name

text: anaerobe

text: 78 deg. C

text: 55-85 deg. C

characteristic: temperature range

text: Caldicellulosiruptor obsidiansis OB47, complete genome.


characteristic: External Id

text: DOE-GEBA 2007

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Prodigal, GenePRIMP

characteristic: Gene Calling Method

text: Gram-

characteristic: Greengenes ID

text: NCBI

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Yes

characteristic: Type Strain

text: free living

characteristic: biotic relationship

text: Rod-shaped

characteristic: cell shape

text: Pacific Ocean

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Marine, Sediment

characteristic: environment

text: Deep-sea sediments at the Hatoma Knoll in the Mid-Okinawa Trough hydrothermal field in Japan

text: deep-sea sediments at the Hatoma Knoll in the Mid-Okinawa Trough hydrothermal field

characteristic: isolation-source

text: 27.266 N 127.166 E

text: Motile

characteristic: motility

text: Sulfurimonas autotrophica DSM 16294

characteristic: organism

text: 4.5 - 9.0

text: Sulfurimonas autotrophica OK10, DSM 16294

text: DSM 16294, ATCC BAA-671, JCM 11897

text: DSM 16294

characteristic: strain

characteristic: temperature optimum

text: Mesophile

text: Sulfurimonas autotrophica DSM 16294, complete genome.

characteristic: title

text: type strain of Sulfurimonas autotrophica

characteristic: type material


characteristic: External Id

characteristic: GOLD Stamp ID

text: Gram-

characteristic: Gram Staining

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Nonsporulating

characteristic: Sporulation

text: Yes

text: free living

text: Rod-shaped

text: USA

characteristic: country

text: Keywords: GSC:MIGS:2.1

text: Hot spring

characteristic: investigation type

text: Freshwater sediment; Owens Lake, California, USA

characteristic: isolation site

text: freshwater sediment, Owens Lake

text: 36.44356 N 117.951479 W

characteristic: lat lon

text: Caldicellulosiruptor owensensis OL

characteristic: ph

text: Caldicellulosiruptor owensensis OL

characteristic: project name

text: DSM 13100, ATCC 700167

text: anaerobe

text: OL

text: Hyperthermophile

characteristic: temperature range

text: Caldicellulosiruptor owensensis OL, complete genome.

text: type strain of Caldicellulosiruptor owensensis


characteristic: External Id

text: Gram-

text: NCBI

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Nonsporulating

text: Yes

characteristic: Type Strain

text: free living

characteristic: biotic relationship

text: Rod-shaped

characteristic: cell shape

text: Russia

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Hot spring

characteristic: environment

text: Terrestrial neutral geothermal spring; Russia, Kamchatka

text: terrestrial neutral geothermal spring

characteristic: isolation-source

text: Caldicellulosiruptor hydrothermalis 108

characteristic: organism

text: Caldicellulosiruptor hydrothermalis 108

text: DSM 18901

text: anaerobe

characteristic: strain

characteristic: temperature optimum

text: Hyperthermophile

text: Caldicellulosiruptor hydrothermalis 108, complete genome.

characteristic: title

text: type strain of Caldicellulosiruptor hydrothermalis

characteristic: type material


characteristic: GOLD Stamp ID

text: Gram+

characteristic: Gram Staining

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Nonsporulating

characteristic: Sporulation

text: Yes

text: free living

text: Rod-shaped

text: Russia

characteristic: country

text: Keywords: GSC:MIGS:2.1

text: Hot spring

characteristic: investigation type

text: terrestrial neutral geothermal spring

characteristic: isolation site

text: terrestrial neutral geothermal spring

text: 54.108 N 159.427 E

characteristic: lat lon

text: Motile

characteristic: motility

characteristic: ph

text: DSM 18902

text: anaerobe

text: Thermophile

text: Caldicellulosiruptor kronotskyensis 2002, complete genome.

text: type strain of Caldicellulosiruptor kronotskyensis


characteristic: External Id

text: DOE-GEBA 2009

characteristic: Funding Program

text: NCBI

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Nonsporulating

text: Yes

characteristic: Type Strain

text: free living

characteristic: biotic relationship

text: Rod-shaped

characteristic: cell shape

text: Japan

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Drain water from an underground crude-oil storage cavity; Japan, Kuji, Iwate

text: drain water from underground crude oil storage cavity

characteristic: isolation-source

text: 40.190524 N 141.775583 E

text: Motile

text: Sulfuricurvum kujiense DSM 16994

characteristic: organism

text: Sulfuricurvum kujiense YK-1, DSM 16994

characteristic: project name

text: DSM 16994, ATCC BAA-921

text: anaerobe

text: DSM 16994

characteristic: strain

characteristic: temperature optimum

text: Mesophile

characteristic: temperature range

text: Sulfuricurvum kujiense DSM 16994 plasmid pSULKU04, complete sequence.

characteristic: title

text: chemolithoautotroph

text: type strain of Sulfuricurvum kujiense


text: Gastrointestinal tract

characteristic: Body Sample Site

text: DOE-CSP 2009

characteristic: GOLD Stamp ID

text: Gram+

characteristic: Gram Staining

characteristic: Greengenes ID

text: Sheep

characteristic: Host Name

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: No

text: free living

text: Rumen

characteristic: body sample subsite

text: Rod-shaped

text: South Africa

characteristic: country

text: Keywords: GSC:MIGS:2.1

text: Rumen

characteristic: environment

characteristic: investigation type

text: sheep fed a high roughage diet, South Africa

characteristic: isolation site

text: gastrointestinal tract of sheep fed a high roughage diet

text: Motile

characteristic: motility

text: [Eubacterium] cellulosolvens 6

text: Eubacterium cellulosolvens 6

text: ATCC 43171

text: anaerobe

text: Mesophile

text: Sample from [Eubacterium] cellulosolvens 6


characteristic: External Id

text: Gram+

text: NCBI

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Nonsporulating

characteristic: Sporulation

text: free living

characteristic: biotic relationship

text: Rod-shaped

characteristic: cell shape

text: Greece

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Creosote-contaminated soil, Soil

text: creosote contaminated site near Ioannina, Epirus, Greece

text: creosote contaminated soil

characteristic: isolation-source

text: 39.674495 N 20.840141 E

characteristic: lat lon

text: Nonmotile

text: Mycolicibacterium gilvum Spyr1

characteristic: organism

text: Mycobacterium sp. Spyr1

characteristic: project name

text: aerobe

characteristic: strain

text: Mesophile

characteristic: temperature range

text: Mycobacterium sp. Spyr1, complete genome.

characteristic: title

text: chemoorganotroph


text: DOE-GEBA 2007

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Prodigal 1.4, GenePRIMP

characteristic: Gene Calling Method

text: Gram+

characteristic: Gram Staining

characteristic: Greengenes ID

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: isolated by L.V. Kalakoutskii

characteristic: Isolation Comments

text: Generic

characteristic: NCBI submission model

text: Nonsporulating

text: Yes

characteristic: Type Strain

text: free living

characteristic: collection date

text: Russia

characteristic: country

text: Keywords: GSC:MIGS:2.1

text: Air

characteristic: environment

characteristic: investigation type

text: Air in a school dining room

text: air in a school dining room

text: 55.753 N 37.604 E

text: Nonmotile

text: 847906 pyrosequencing, 11758818 Illumina

characteristic: number of reads

text: Intrasporangium calvum DSM 43043

text: Intrasporangium calvum 7KIP, DSM 43043

text: DSM 43043, ATCC 23552, CUB 430, IFO 12989, IMET 7816, JCM 3097, KCC A-0097, NBRC 12989, NCIB 10167

text: aerobe

text: DSM 43043

characteristic: temperature optimum

text: Mesophile

text: Intrasporangium calvum DSM 43043, complete genome.

text: chemoorganotroph

text: type strain of Intrasporangium calvum

characteristic: type material


characteristic: External Id

text: DOE-GEBA 2007

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Gram+

characteristic: Gram Staining

text: NCBI

text: live

text: isolated by K Takai

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Nonsporulating

characteristic: Sporulation

text: Yes

text: free living

characteristic: biotic relationship

text: Pacific Ocean

text: 10897 m

characteristic: depth

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Mud

text: mud from the Challenger Deep in the Mariana Trench at a depth of 10897m

characteristic: isolation site

text: mud from the Challenger Deep in the Mariana Trench at a depth of 10897 m

characteristic: isolation-source

text: Nonmotile

characteristic: motility

text: Thermaerobacter marianensis DSM 12885

characteristic: organism

text: Thermaerobacter marianensis 7p75a, DSM 12885

characteristic: project name

text: DSM 12885, JCM 10246

text: aerobe

text: DSM 12885

characteristic: strain

text: Hyperthermophile

characteristic: temperature range

text: Thermaerobacter marianensis DSM 12885, complete genome.

characteristic: title

text: type strain of Thermaerobacter marianensis


characteristic: External Id

text: DOE-CSP 2009

characteristic: Funding Program

text: JGI -ORNL annotation pipeline

characteristic: Gene Calling Method

text: Gram-

characteristic: Greengenes ID

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Nonsporulating

text: free living

text: Rod-shaped

characteristic: cell shape

text: Keywords: GSC:MIGS:2.1

text: Fresh water, Soil

characteristic: environment

characteristic: investigation type

text: Motile

text: Rhodopseudomonas palustris DX-1

text: Rhodopseudomonas palustris DX-1

text: facultative

text: Mesophile

text: Rhodopseudomonas palustris DX-1, complete genome.

text: phototroph


characteristic: GOLD Stamp ID

text: Gram+

characteristic: Gram Staining

text: NCBI

text: live

text: isolated by Viljoen et al 1926

characteristic: Isolation Comments

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Sporulating

characteristic: Sporulation

text: No

characteristic: Type Strain

text: free living

characteristic: biotic relationship

text: Rod-shaped

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Motile

characteristic: motility

text: Acetivibrio thermocellus DSM 1313

characteristic: organism

text: Clostridium thermocellum LQ8, DSM 1313

characteristic: project name

text: LMG 6656, DSM 1313

text: anaerobe

text: DSM 1313

characteristic: temperature optimum

text: Thermophile

text: Clostridium thermocellum DSM 1313, complete genome.

text: chemoorganotroph


characteristic: External Id

text: Gram-

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Sporulating

text: Yes

text: free living

text: Rod-shaped

text: Sweden

characteristic: country

text: 600 meters

characteristic: depth

text: Keywords: GSC:MIGS:2.1

text: Animal intestinal microflora, Fresh water, Mud, Sea water, Soil

text: Granitic rock aquifer at 600 m depth; Sweden, Dspv Island

characteristic: isolation site

text: granitic rock aquifer at 600 m depth

characteristic: isolation-source

text: 56.115502 N 15.537785 E

characteristic: lat lon

text: Motile

text: Pseudodesulfovibrio aespoeensis Aspo-2

text: Desulfovibrio aespoeensis Aspo-2, DSM 10631

text: DSM 10631, ATCC 700646

text: obligate anaerobe

characteristic: strain

text: Mesophile

characteristic: temperature range

text: Desulfovibrio aespoeensis Aspo-2, complete genome.

characteristic: title

text: type strain of Pseudodesulfovibrio aespoeensis

characteristic: type material


text: DOEM 2005

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Prodigal

characteristic: Gene Calling Method

text: Gram+

characteristic: Gram Staining

text: NCBI

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Sporulating

characteristic: Sporulation

text: free living

characteristic: biotic relationship

text: Rod-shaped

characteristic: cell shape

text: USA

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Fresh water, Hot spring

characteristic: environment

characteristic: investigation type

text: Obsidian Hot Spring in Yellowstone National Park

text: 44.376262 N 110.690383 W

text: Motile

characteristic: motility

text: Geobacillus sp. Y412MC52

characteristic: organism

text: Geobacillus sp. Y412MC52

characteristic: project name

text: facultative

text: Thermophile

text: Geobacillus sp. Y412MC52, complete genome.

text: chemoorganotroph


characteristic: External Id

text: Gram-

characteristic: Greengenes ID

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Yes

characteristic: Type Strain

text: free living

text: Rod-shaped

text: Keywords: GSC:MIGS:2.1

text: Deep sea, Fresh water, Hydrothermal vent, Marine

text: Walls of an active deep-sea hydrothermal vent chimney on the East Pacific Rise at 9 degrees 50'N

characteristic: isolation site

text: walls of an active deep-sea hydrothermal vent chimney on the East Pacific Rise at 9 degrees 50' N

characteristic: isolation-source

text: Motile

text: Thermovibrio ammonificans HB-1

characteristic: ph

text: Thermovibrio ammonificans HB-1, DSM 15698

text: DSM 15698, JCM 12110

text: anaerobe

characteristic: strain

text: 60 - 80C

characteristic: temperature optimum

text: Thermophile

characteristic: temperature range

text: Thermovibrio ammonificans HB-1, complete genome.

characteristic: title

text: chemolithoautotroph

text: type strain of Thermovibrio ammonificans


text: DOE-CSP 2009

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Gram-

characteristic: Gram Staining

text: Biserrula pelecinus L

characteristic: Host Name

text: NCBI

text: live

text: growth in 96 hrs on 0.5LA

characteristic: Isolation Comments

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Howieson

characteristic: Source of Isolate

text: No

text: symbiont

characteristic: biotic relationship

text: biserrulae WSM1271

characteristic: biovar

text: Rod-shaped

characteristic: cell shape

characteristic: collection date

text: Italy

characteristic: country

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Host, Rhizosphere, Root nodule, Soil, Plant root

characteristic: environment

characteristic: investigation type

text: 5 km before Bottida, Sardinia

text: 40.382709 N 9.012008 E

characteristic: lat lon

text: Motile

characteristic: motility

characteristic: organism

text: Mesorhizobium ciceri bv biserrulae WSM1271

characteristic: project name

text: LMG 23838, HAMBI 2942

text: aerobe

text: Mutualistic

characteristic: symbiotic relationship

text: Mesophile

text: Mesorhizobium ciceri biovar biserrulae WSM1271 plasmid pMESCI01, complete sequence.


characteristic: External Id

text: DOE-GEBA 2007

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Gram-

characteristic: Gram Staining

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Nonsporulating

characteristic: Sporulation

text: Yes

characteristic: Type Strain

text: Rod-shaped

text: Japan

text: Keywords: GSC:MIGS:2.1

text: Deep-sea hydrothermal vent chimney; Japan, Iheya North hydrothermal field in the Mid-Okinawa Trough

characteristic: isolation site

text: deep-sea hydrothermal vent chimney from the Iheya North hydrothermal field in the Mid-Okinawa Trough

characteristic: isolation-source

text: 27.036 N 127.962 E

text: Nonmotile

text: Nitratifractor salsuginis DSM 16511

text: Nitratifractor salsuginis E9I37-1, DSM 16511

text: DSM 16511, JCM 12458

text: anaerobe

text: DSM 16511

characteristic: strain

characteristic: temperature optimum

text: Mesophile

characteristic: temperature range

text: Nitratifractor salsuginis DSM 16511, complete genome.

characteristic: title

text: type strain of Nitratifractor salsuginis

characteristic: type material


characteristic: External Id

text: DOE-GEBA 2009

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Prodigal 1.4, GenePRIMP

characteristic: Gene Calling Method

text: Gram+

text: NCBI

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Yes

text: free living

characteristic: biotic relationship

text: Coccus-shaped

characteristic: cell shape

text: USA

characteristic: country

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Soil

characteristic: environment

characteristic: investigation type

text: Soil, sonoran desert; USA, Arizona

text: sonoran desert soil

text: 32.927838 N 112.304867 W

characteristic: lat lon

text: Nonmotile

characteristic: motility

text: Deinococcus maricopensis DSM 21211

characteristic: organism

text: Radiation resistant

characteristic: phenotypes

text: Deinococcus maricopensis LB-34, DSM 21211

characteristic: project name

text: DSM 21211, LMG 22137, NRRL B-23946

text: aerobe

text: DSM 21211

text: Mesophile

text: Deinococcus maricopensis DSM 21211, complete genome.

text: type strain of Deinococcus maricopensis


characteristic: External Id

text: DOEM 2007

text: Prodigal

text: Gram+

characteristic: Gram Staining

characteristic: Greengenes ID

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Christpher L. Hemme (hemmecl@ou.edu)

characteristic: Source of Isolate

text: Nonsporulating

characteristic: Sporulation

text: Yes

characteristic: Type Strain

text: free living

text: Rod-shaped

text: Keywords: GSC:MIGS:2.1

text: Lake sediment; Africa, Lake Kivu

characteristic: isolation site

text: lake sediment from Lake Kivu in Africa

characteristic: isolation-source

text: 2.042025 S 29.407518 E

text: Motile

characteristic: ph

text: Thermoanaerobacter brocki finnii Ako-1 DSM 3389

text: DSM 3389

text: anaerobe

characteristic: strain

text: finnii

characteristic: sub species

characteristic: temperature optimum

text: Thermophile

characteristic: temperature range

text: Thermoanaerobacter brockii subsp. finnii Ako-1, complete genome.

characteristic: title


characteristic: External Id

characteristic: GOLD Stamp ID

text: Gram-

characteristic: Gram Staining

characteristic: Greengenes ID

text: NCBI

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Yes

text: free living

characteristic: biotic relationship

text: Rod-shaped

characteristic: cell shape

text: Germany

characteristic: country

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Fresh water, Marine, Sediment

characteristic: environment

characteristic: investigation type

text: Freshwater mud in Germany

text: freshwater mud

text: Desulfobulbus propionicus DSM 2032

characteristic: organism

text: 6.6 - 7.5

text: Desulfobulbus propionicus Lindhorst, DSM 2032

characteristic: project name

text: DSM 2032, ATCC 33891

text: anaerobe

text: DSM 2032

text: Mesophile

text: Desulfobulbus propionicus DSM 2032, complete genome.

text: type strain of Desulfobulbus propionicus

characteristic: type material


text: DOE-CSP 2010

characteristic: Funding Program

text: NCBI

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Keywords: GSC:MIGS:2.1

text: Methylocystis sp. ATCC 49242

text: Methylocystis daltonii

text: ATCC 49242

characteristic: strain

text: Sample from Methylocystis sp. ATCC 49242

characteristic: title


text: Urogenital tract

characteristic: Body Sample Site

characteristic: External Id

text: DOE-GEBA 2009

characteristic: GOLD Stamp ID

text: Prodigal 1.4, GenePRIMP

characteristic: Gene Calling Method

text: Gram-

characteristic: Gram Staining

text: Homo sapiens

characteristic: Host Name

text: NCBI

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Yes

characteristic: Type Strain

text: free living

characteristic: biotic relationship

text: Urinary tract

characteristic: body sample subsite

text: Rod-shaped

text: USA

text: Keywords: GSC:MIGS:2.1

text: Host

text: Human urine; USA, North Carolina

characteristic: isolation site

text: urine

characteristic: isolation-source

text: Weeksella virosa DSM 16922

text: Weeksella virosa CL345/78, DSM 16922

text: DSM 16922, ATCC 43766, CDC 9751, CIP 103040, NCTC 11634

text: aerobe

text: DSM 16922

text: Mesophile

characteristic: temperature range

text: Weeksella virosa DSM 16922, complete genome.

text: type strain of Weeksella virosa


text: DOE-LSP 2007

characteristic: Funding Program

text: Gram-

characteristic: Greengenes ID

text: NCBI

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Nonsporulating

characteristic: Sporulation

text: free living

text: Rod-shaped

characteristic: cell shape

text: Keywords: GSC:MIGS:2.1

characteristic: description

characteristic: investigation type

text: Motile

characteristic: motility

text: Pseudodesulfovibrio mercurii

characteristic: organism

text: Desulfovibrio sp. ND132

characteristic: project name

text: anaerobe

characteristic: strain

text: Mesophile

text: Desulfovibrio sp. ND132 chromosome

text: type strain of Pseudodesulfovibrio mercurii

characteristic: type material


characteristic: External Id

text: DOE-CSP 2009

characteristic: GOLD Stamp ID

text: Prodigal 1.4, GenePRIMP

characteristic: Gene Calling Method

text: Gram-

characteristic: Gram Staining

text: NCBI

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: free living

characteristic: biotic relationship

text: Spiral-shaped

text: Russia

characteristic: country

text: Keywords: GSC:MIGS:2.1

text: Hot spring, Marine

characteristic: environment

text: Marine hot spring; USSR, Shiashkoten island

characteristic: isolation site

text: marine hot spring

characteristic: isolation-source

text: 48.826533 N 154.125478 E

characteristic: lat lon

text: Motile

text: Sphaerochaeta globosa str. Buddy

text: Spirochaeta sp. Buddy

text: anaerobe

text: Buddy

characteristic: temperature optimum

text: Hyperthermophile

characteristic: temperature range

text: Spirochaeta sp. Buddy, complete genome.

characteristic: title


text: Gastrointestinal tract

characteristic: Body Sample Site

text: DOE-GEBA 2009

characteristic: Funding Program

text: Prodigal 1.4, GenePRIMP

text: Gram-

text: Homo sapiens

characteristic: Host Name

text: NCBI

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: isolated by H Werner

characteristic: Isolation Comments

text: Generic

characteristic: NCBI submission model

text: Nonsporulating

characteristic: Sporulation

text: Yes

characteristic: Type Strain

text: free living

text: Fusiform

characteristic: cell shape

characteristic: collection date

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Host

characteristic: investigation type

text: abdominal abscess

text: abdominal abscess

text: Nonmotile

characteristic: motility

text: Odoribacter splanchnicus DSM 20712

characteristic: organism

text: Odoribacter splanchnicus 1651/6, DSM 20712

characteristic: project name

text: DSM 20712, ATCC 29572, CCUG 21054, CIP 104287, LMG 8202, NCTC 10825

text: anaerobe

text: DSM 220712

characteristic: strain

text: Mesophile

text: Odoribacter splanchnicus DSM 20712, complete genome.


characteristic: External Id

text: DOE-GEBA 2009

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Prodigal 1.4, GenePRIMP

characteristic: Gene Calling Method

text: Gram-

characteristic: Gram Staining

text: chicken

characteristic: Host Name

text: NCBI

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Nonsporulating

text: Yes

text: free living

characteristic: biotic relationship

text: Rod-shaped

text: isolated by P. T. N. Lan

characteristic: collected by

text: Japan

characteristic: country

text: Keywords: GSC:MIGS:2.1

text: Host

characteristic: environment

text: caecum of chicken

characteristic: isolation site

text: cecum

characteristic: isolation-source

text: Nonmotile

text: Phocaeicola salanitronis DSM 18170

text: Bacteroides salanitronis BL78, DSM 18170

text: DSM 18170, CCUG 54637, JCM 13657

text: anaerobe

text: DSM 18170

characteristic: temperature optimum

text: Mesophile

characteristic: temperature range

text: Bacteroides salanitronis DSM 18170 plasmid pBACSA03, complete sequence.

characteristic: title

text: type strain of Phocaeicola salanitronis

characteristic: type material


characteristic: External Id

text: DOE-GEBA 2009

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Prodigal 1.4, GenePRIMP

text: Gram-

text: NCBI

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: isolated by R.A. Lewin

characteristic: Isolation Comments

text: Generic

characteristic: NCBI submission model

text: Yes

characteristic: Type Strain

text: free living

text: Rod-shaped

characteristic: cell shape

characteristic: collection date

text: Costa Rica

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Mud

characteristic: investigation type

text: Beach mud; Limon, Costa Rica

text: beach mud

text: 10.131928 N 83.518524 W

characteristic: lat lon

text: Motile

characteristic: motility

text: Cellulophaga lytica DSM 7489

characteristic: organism

characteristic: ph

text: Cellulophaga lytica Cy l20, DSM 7489

characteristic: project name

text: DSM 7489, ATCC 23178, IAM 14306

text: aerobe

text: DSM 7489

characteristic: strain

text: Mesophile

text: Cellulophaga lytica DSM 7489, complete genome.

text: chemoheterotroph

text: type strain of Cellulophaga lytica


characteristic: External Id

characteristic: GOLD Stamp ID

text: Prodigal 1.4, GenePRIMP

characteristic: Gene Calling Method

text: Gram-

characteristic: Gram Staining

characteristic: Greengenes ID

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Nonsporulating

characteristic: Sporulation

text: Yes

text: free living

characteristic: biotic relationship

text: Rod-shaped

text: Keywords: GSC:MIGS:2.1

text: Marine

characteristic: environment

text: Deep-sea hydrothermal vent chimney; Mid-Atlantic Ridge

characteristic: isolation site

text: deep-sea hydrothermal vent chimney

characteristic: isolation-source

text: 23.366667 N 44.933333 W

text: Motile

text: Desulfurobacterium thermolithotrophum BSA, DSM 11699

text: DSM 11699

text: anaerobe

text: DSM 11699

characteristic: temperature optimum

text: Thermophile

characteristic: temperature range

text: Desulfurobacterium thermolithotrophum DSM 11699, complete genome.

characteristic: title

text: autotroph

text: type strain of Desulfurobacterium thermolithotrophum

characteristic: type material


characteristic: External Id

text: DOEM 2007

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Gram+

text: NCBI

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Mud from alkaline hot spring

characteristic: Source of Isolate

text: Sporulating

text: Yes

characteristic: Type Strain

text: free living

text: Rod-shaped

characteristic: cell shape

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Fresh water

characteristic: investigation type

text: Hot spring, Yellowstone National Park, Wyoming, United States

text: mud from alkaline hot spring

text: Motile

characteristic: motility

text: Thermoanaerobacter ethanolicus JW 200

characteristic: organism

text: Alkaliphile, Amylase production

characteristic: phenotypes

text: Thermoanaerobacter ethanolicus JW 200

characteristic: project name

text: JW 200, ATCC 31550, DSM 2246, LMG 12893, VKM B-1835

text: anaerobe

text: JW 200

characteristic: strain

text: Thermophile

text: Generic sample from Thermoanaerobacter ethanolicus JW 200

text: type strain of Thermoanaerobacter ethanolicus


characteristic: External Id

text: DOE-CSP 2010

text: Gram-

characteristic: Gram Staining

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: free living

characteristic: biotic relationship

text: Rod-shaped

text: Keywords: GSC:MIGS:2.1

text: Marine

characteristic: environment

text: Motile

text: Marinomonas mediterranea MMB-1

text: Marinomonas mediterranea MMB-1

text: aerobe

text: Mesophile

characteristic: temperature range

text: Marinomonas mediterranea MMB-1, complete genome.

characteristic: title


characteristic: GOLD Stamp ID

text: Gram-

text: NCBI

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Nonsporulating

characteristic: Sporulation

text: free living

text: Rod-shaped

characteristic: cell shape

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Motile

text: Sphingobacterium sp. 21

text: Sphingobacterium sp. 21

text: Mesophile

text: Sphingobacterium sp. 21, complete genome.

text: chemoorganotroph


characteristic: External Id

text: DOE-GLBRC 2008

characteristic: Funding Program

text: Gram+

characteristic: Gram Staining

text: Xyleborinus saxeseni

characteristic: Host Name

text: NCBI

text: live

text: Generic

text: Sporulating

text: free living

text: Filament-shaped

text: Keywords: GSC:MIGS:2.1

characteristic: investigation type

text: Xyleborinus saxeseni

characteristic: isolation site

text: Nonmotile

characteristic: motility

text: Streptomyces sp. ACT-1

characteristic: organism

text: Streptomyces sp. ACT-1

characteristic: project name

text: Cameron Currie

text: aerobe

characteristic: strain

text: Mesophile

text: Streptomyces griseus XylebKG-1 genomic scaffold scaffold_1


characteristic: GOLD Stamp ID

text: Gram+

characteristic: Greengenes ID

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: isolated by RE Parales, JA Romesser, for Celgene Corporation

characteristic: Isolation Comments

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Yes

characteristic: Type Strain

text: free living

characteristic: biotic relationship

text: USA

characteristic: country

text: Keywords: GSC:MIGS:2.1

text: Sludge, Fresh water

characteristic: environment

text: Industrial sludge contaminated with 1,4-dioxane

text: industrial sludge contaminated with 1,4-dioxane

characteristic: isolation-source

text: 34.299366 N 79.876714 W

characteristic: lat lon

text: Pseudonocardia dioxanivorans CB1190

text: Pseudonocardia dioxanivorans CB1190

text: ATCC 55486, DSM 44775

text: aerobe

characteristic: temperature optimum

text: Mesophile

characteristic: temperature range

text: Pseudonocardia dioxanivorans CB1190 plasmid pPSED03, complete sequence.

characteristic: title

text: type strain of Pseudonocardia dioxanivorans

characteristic: type material


characteristic: External Id

text: DOE-GEBA 2010

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Prodigal 1.4, GenePRIMP

characteristic: Gene Calling Method

text: Gram-

characteristic: Gram Staining

characteristic: Greengenes ID

text: NCBI

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Yes

text: free living

text: Rod-shaped

characteristic: cell shape

text: Papua New Guinea

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Marine

characteristic: investigation type

text: Marine sediment from hot vent of tidal zone; Papua New Guinea, Matupi Harbour

characteristic: isolation site

text: marine sediment from hot vent of tidal zone

text: 4.233333 S 152.2 E

text: Motile

characteristic: motility

text: Hippea maritima DSM 10411

characteristic: organism

text: 5.8 - 6.2

characteristic: ph

text: Hippea maritima MH2, DSM 10411

characteristic: project name

text: DSM 10411

text: anaerobe

text: DSM 10411

characteristic: strain

text: Thermophile

text: Hippea maritima DSM 10411, complete genome.

text: type strain of Hippea maritima


characteristic: External Id

text: DOE-GEBA 2007

characteristic: Funding Program

text: Prodigal 1.4, GenePRIMP

text: Gram-

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Yes

characteristic: Type Strain

text: free living

characteristic: biotic relationship

text: 3500m depth

characteristic: depth

text: Keywords: GSC:MIGS:2.1

text: Deep sea, Marine

characteristic: environment

text: Black smoker wall, 3500m depth; Mid-Atlantic Ridge

text: Black smoker wall, 3500 m depth

characteristic: isolation-source

text: Motile

text: Archaeoglobus veneficus SNP6

text: Barophile

characteristic: phenotypes

text: Archaeoglobus veneficus SNP6, DSM 11195

text: DSM 11195

text: anaerobe

characteristic: temperature optimum

text: Hyperthermophile

characteristic: temperature range

text: Archaeoglobus veneficus SNP6, complete genome.

characteristic: title

text: chemolithoautotroph

text: type strain of Archaeoglobus veneficus

characteristic: type material


characteristic: External Id

text: DOE-GEBA 2009

characteristic: GOLD Stamp ID

text: Prodigal 1.4, GenePRIMP

characteristic: Gene Calling Method

text: Gram-

characteristic: Gram Staining

text: NCBI

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: isolated by L. A. O'Sullivan

characteristic: Isolation Comments

text: Generic

characteristic: NCBI submission model

text: Yes

text: free living

text: Rod-shaped

characteristic: cell shape

characteristic: collection date

text: United Kingdom

characteristic: country

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Fresh water, Hot spring

characteristic: investigation type

text: Water of the River Taff, Cardiff, UK

characteristic: isolation site

text: water

text: 51.481 N 3.180 W

characteristic: lat lon

text: Motile

characteristic: motility

text: Fluviicola taffensis DSM 16823

characteristic: organism

text: Fluviicola taffensis RW262, DSM 16823

characteristic: project name

text: DSM 16823, NCIMB 13979

text: aerobe

text: DSM 16823

characteristic: strain

text: Mesophile

text: Fluviicola taffensis DSM 16823, complete genome.

text: type strain of Fluviicola taffensis


characteristic: External Id

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: 0 m

characteristic: alt

text: 0 m

text: MicHanThi (auto-annotation)

characteristic: annot source

text: free living

characteristic: biotic relationship

text: Germany: Sylt, Koenigshafen

text: CDinFusion

characteristic: created with

text: 0 m

characteristic: depth

text: Keywords: GSC:MIGS:2.1

text: antibiotic resistance: streptomycine, ampiciline, cycloserine, cycloheximide

characteristic: environment

text: sediment

characteristic: environmental package

text: 7100000 bp

characteristic: estimated size

characteristic: feature

text: 55.03417 N 8.40167 E

characteristic: material

text: Rhodopirellula baltica WH47

text: Microbial Interactions in MArine Systems (MIMAS)

text: aerobe

text: with small spatula upper sand grains were taken from sediment surface

characteristic: samp mat process

text: 5ml Eppendorf vial

characteristic: sop

text: submission in progress to DSMZ and RIKEN, not completed yet.

text: 15.7 degC

characteristic: temp

text: Generic sample from Rhodopirellula baltica WH47

characteristic: title

text: heterotroph

characteristic: url


characteristic: External Id

text: DOE-GEBA 2009

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Prodigal 1.4, GenePRIMP

characteristic: Gene Calling Method

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Yes

characteristic: Type Strain

text: free living

text: Helical-shaped

characteristic: cell shape

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Host

characteristic: investigation type

text: colon of swine

characteristic: isolation site

text: colon

characteristic: isolation-source

text: Motile

characteristic: motility

text: Treponema succinifaciens DSM 2489

characteristic: organism

text: Treponema succinifaciens DSM 2489

characteristic: project name

text: DSM 2489

text: anaerobe

text: DSM 2489

characteristic: strain

text: Mesophile

characteristic: temperature range

text: Treponema succinifaciens DSM 2489 plasmid pTRESU01, complete sequence.

text: type strain of Treponema succinifaciens

characteristic: type material


characteristic: External Id

text: DOE-GEBA 2009

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Prodigal 1.4, GenePRIMP

characteristic: Gene Calling Method

text: Gram-

characteristic: Gram Staining

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: SRA accession

text: Yes

text: free living

characteristic: biotic relationship

text: Rod-shaped

text: Pacific Ocean: off Japan

characteristic: country

text: 1,385 m

characteristic: depth

text: Keywords: GSC:MIGS:2.1

text: Marine

characteristic: environment

text: deep-sea hydrothermal vent chimney sample collected from the Suiyo Seamount in the Izu-Bonin Arc, Japan, at a depth of 1,385 m

text: deep-sea hydrothermal vent chimney sample, 1,385 m depth

text: 29.47021 N 140.837401 E

characteristic: lat lon

text: Nonmotile

text: Marinithermus hydrothermalis DSM 14884

characteristic: ph

text: Marinithermus hydrothermalis T1, DSM 14884

text: DSM 14884

text: obligate aerobe

text: DSM 14884

characteristic: temperature optimum

text: Thermophile

text: Marinithermus hydrothermalis DSM 14884, complete genome.

characteristic: title

text: heterotroph

text: type strain of Marinithermus hydrothermalis


characteristic: External Id

text: DOE-GEBA 2007

text: Prodigal 1.4, GenePRIMP

text: Gram-

characteristic: Greengenes ID

text: NCBI

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: isolated by S. J. W. H. Oude Elferink

characteristic: Isolation Comments

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Nonsporulating

characteristic: Sporulation

text: Yes

characteristic: Type Strain

text: free living

text: Oval-shaped

characteristic: cell shape

text: Netherlands

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Fresh water, Fresh water

characteristic: investigation type

text: Anaerobic granular sludge of a pilot-scale UASB reactor (1.7 1) fed with acetate and an excess of sulfate.

characteristic: isolation site

text: anaerobic granular sludge of a pilot-scale UASB reacter fed with acetate and an excess of sulfate

characteristic: isolation-source

text: 51.970 N 5.665 E

text: Nonmotile

characteristic: motility

text: Desulfobacca acetoxidans DSM 11109

characteristic: organism

text: Desulfobacca acetoxidans ASRB2, DSM 11109

characteristic: project name

text: DSM 11109, ATCC 700848

text: anaerobe

text: DSM 11109

characteristic: strain

text: Mesophile

characteristic: temperature range

text: Desulfobacca acetoxidans DSM 11109, complete genome.

text: type strain of Desulfobacca acetoxidans

characteristic: type material


text: Gastrointestinal tract

characteristic: Body Sample Site

characteristic: External Id

text: DOE-GEBA 2007

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Gram+

characteristic: Gram Staining

characteristic: Greengenes ID

text: Pyrrhocoris apterus

characteristic: Host Name

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: isolated by F. Haas

text: Generic

characteristic: SRA accession

text: Nonsporulating

text: Yes

text: Intestinal tract

characteristic: body sample subsite

text: Rod-shaped

text: Germany

characteristic: country

text: Keywords: GSC:MIGS:2.1

text: Host, Intestinal tract

characteristic: environment

text: Intestinal tract of the red soldier bug

text: intestinal tract

text: Nonmotile

text: Coriobacterium glomerans PW2

text: Coriobacterium glomerans PW2, DSM 20642

text: DSM 20642, ATCC 49209, JCM 10262

text: obligate anaerobe

characteristic: temperature optimum

text: Mesophile

text: Coriobacterium glomerans PW2, complete genome.

characteristic: title

text: chemoorganotroph

text: type strain of Coriobacterium glomerans


characteristic: External Id

text: DOEM 2007

text: Gram+

text: NCBI

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: free living

characteristic: biotic relationship

text: Rod-shaped

characteristic: cell shape

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Host, Intestinal microflora

characteristic: investigation type

text: Fuel ethanol production facility

characteristic: isolation site

text: Nonmotile

characteristic: motility

text: Lentilactobacillus buchneri NRRL B-30929

characteristic: organism

text: Probiotic

characteristic: phenotypes

text: Lactobacillus buchneri NRRL B-30929

characteristic: project name

text: NRRL B-30929

text: facultative

text: NRRL B-30929

characteristic: strain

text: Mesophile

characteristic: temperature range

text: Lactobacillus buchneri NRRL B-30929 plasmid pLBUC03, complete sequence.


text: Level 6: Finished

characteristic: Current Finishing Status

text: DOE-CSP 2009

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Gram-

characteristic: Gram Staining

characteristic: Greengenes ID

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: SRA accession

text: Yes

characteristic: Type Strain

text: free living

text: Germany

characteristic: country

text: Keywords: GSC:MIGS:2.1

text: Anaerobic sewage sludge

text: anaerobic sewer sludge

characteristic: isolation-source

text: Alicycliphilus denitrificans K601

text: Alicycliphilus denitrificans K601

text: DSM 14773

text: facultative

text: Mesophile

text: Alicycliphilus denitrificans K601 plasmid pALIDE201, complete sequence.

text: type strain of Alicycliphilus denitrificans

characteristic: type material


text: Periodontitis, Septicemia

characteristic: Diseases

characteristic: External Id

text: DOE-GEBA 2007

text: Gram+

text: Homo sapiens

characteristic: Host Name

text: NCBI

text: live

text: isolated by W.E.C. Moore

characteristic: Isolation Comments

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Yes

text: free living

characteristic: biotic relationship

text: Crescent-shaped

characteristic: cell shape

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Gastrointestinal tract, Host, Respiratory tract

characteristic: environment

characteristic: investigation type

text: Subgingival sulcus

characteristic: isolation site

text: subgingival sulcus

text: Motile

characteristic: motility

text: Selenomonas sputigena ATCC 35185

characteristic: organism

text: Pathogen

characteristic: phenotypes

text: Selenomonas sputigena DSM 20758

characteristic: project name

text: DSM 20758, ATCC 35185

text: anaerobe

text: ATCC 35185

characteristic: strain

characteristic: temperature optimum

text: Mesophile

text: Selenomonas sputigena ATCC 35185, complete genome.

characteristic: title

text: neotype strain of Selenomonas sputigena


characteristic: External Id

text: Gram-

characteristic: Gram Staining

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: SRA accession

text: Nonsporulating

characteristic: Sporulation

text: free living

text: Rod-shaped

text: Keywords: GSC:MIGS:2.1

text: Sea water, Sediment

text: Nonmotile

text: Dokdonia sp. 4H-3-7-5

text: Krokinobacter diaphorus 4H-3-7-5

text: aerobe

text: Psychrophile

characteristic: temperature range

text: Krokinobacter sp. 4H-3-7-5, complete genome.

text: heterotroph


text: DOE-GEBA 2007

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Gram-

text: Homo sapiens

characteristic: Host Name

text: NCBI

text: live

text: isolated by S.Finegold

characteristic: Isolation Comments

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Nonsporulating

text: Yes

characteristic: Type Strain

text: free living

characteristic: biotic relationship

text: Rod-shaped

characteristic: cell shape

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Host

characteristic: environment

text: empyema

characteristic: host health

characteristic: investigation type

text: Empyema

characteristic: isolation site

text: empyema

characteristic: isolation-source

text: Nonmotile

characteristic: motility

text: Porphyromonas asaccharolytica DSM 20707

text: Porphyromonas asaccharolytica VPI 4198, DSM 20707

text: DSM 20707, ATCC 25260

text: anaerobe

text: DSM 20707

text: Mesophile

text: Porphyromonas asaccharolytica DSM 20707, complete genome.

text: type strain of Porphyromonas asaccharolytica

characteristic: type material


characteristic: External Id

text: DOE-GEBA 2007

characteristic: Funding Program

text: Prodigal 1.4, GenePRIMP

characteristic: Gene Calling Method

text: Gram+

characteristic: Gram Staining

characteristic: Greengenes ID

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: isolated by Mori et al

text: Generic

characteristic: SRA accession

text: Nonsporulating

characteristic: Sporulation

text: Yes

text: free living

text: Curved-shaped

text: Japan

characteristic: country

text: Keywords: GSC:MIGS:2.1

text: Hot spring

text: Narugo hot spring; Japan

text: hot spring

text: 38.743434 N 140.71658 E

characteristic: lat lon

text: Motile

text: Thermodesulfobium narugense DSM 14796

characteristic: organism

text: Thermodesulfobium narugense Na82, DSM 14796

characteristic: project name

text: DSM 14796, JCM 11510

text: anaerobe

text: DSM 14796

characteristic: strain

characteristic: temperature optimum

text: Thermophile

characteristic: temperature range

text: Thermodesulfobium narugense DSM 14796, complete genome.

characteristic: title

text: type strain of Thermodesulfobium narugense


text: Skin

characteristic: Body Sample Site

characteristic: External Id

text: DOE-GEBA 2009

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Prodigal 1.4, GenePRIMP

characteristic: Gene Calling Method

text: Bovine

characteristic: Host Name

text: NCBI

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Yes

characteristic: Type Strain

text: free living

characteristic: biotic relationship

text: Helical-shaped

characteristic: cell shape

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Host

characteristic: environment

text: foot infected with digital dermatitis

characteristic: host health

characteristic: investigation type

text: Ulcerative lesion of a bovine foot infected with digital dermatitis

characteristic: isolation site

text: skin from ulcerative lesion of bovine foot infected with digital dermatitis

characteristic: isolation-source

text: Motile

characteristic: motility

text: 2x76 Illumina

characteristic: number of reads

text: Treponema brennaborense DSM 12168

text: Treponema brennaborense DD5/3, DSM 12168

text: DSM 12168, CIP 105900

text: anaerobe

text: DSM 12168

text: Mesophile

text: Treponema brennaborense DSM 12168, complete genome.

text: type strain of Treponema brennaborense

characteristic: type material


characteristic: External Id

text: DOE-GEBA 2009

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: isolated by Van Veen

characteristic: Isolation Comments

text: Generic

characteristic: SRA accession

text: Yes

characteristic: collection date

text: Keywords: GSC:MIGS:2.1

text: Sludge

text: Netherlands

characteristic: geo loc name

text: activated sludge

characteristic: isolation source

text: Haliscomenobacter hydrossis DSM 1100

characteristic: organism

text: Haliscomenobacter hydrossis O, DSM 1100

characteristic: project name

text: DSM 1100, ATCC 27775, LMG 10393

text: DSM 1100

characteristic: strain

text: Mesophile

characteristic: temperature range

text: Haliscomenobacter hydrossis DSM 1100 plasmid pHALHY03, complete sequence.

characteristic: title

text: type strain of Haliscomenobacter hydrossis


characteristic: External Id

text: Gram-

characteristic: Gram Staining

text: NCBI

text: live

text: isolated by NR Smith

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Nonsporulating

characteristic: Sporulation

text: Yes

characteristic: Type Strain

text: free living

characteristic: biotic relationship

text: Rod-shaped

characteristic: cell shape

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Soil

characteristic: environment

characteristic: investigation type

text: Soil

characteristic: isolation site

text: soil

characteristic: isolation-source

text: Motile

characteristic: motility

text: Cellulomonas fimi ATCC 484

text: Cellulomonas fimi NRS 133, ATCC 484

text: ATCC 484, DSM 20113, NCIB 8980, NCTC 7547

text: facultative

text: ATCC 484

characteristic: temperature optimum

text: Mesophile

text: Cellulomonas fimi ATCC 484, complete genome.

text: chemoorganotroph

text: type strain of Cellulomonas fimi

characteristic: type material


text: DOE-LSP 2007

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Prodigal 1.4, GenePRIMP

characteristic: Gene Calling Method

text: Gram-

characteristic: Greengenes ID

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: isolated by M.E. Adams

characteristic: Isolation Comments

text: Generic

characteristic: SRA accession

text: No

text: free living

text: Rod-shaped

characteristic: collection date

text: Keywords: GSC:MIGS:2.1

text: Sea water, Fresh water, Soil

text: marine mud after eruption of submarine hydrogen sulfide

text: Motile

text: Desulfocurvibacter africanus subsp. africanus str. Walvis Bay

characteristic: organism

text: Desulfovibrio africanus Walvis Bay

characteristic: project name

text: ATCC 19997, NCIB 8397

text: anaerobe

text: Walvis Bay

characteristic: strain

text: africanus

characteristic: sub species

text: Mesophile

characteristic: temperature range

text: Desulfovibrio africanus str. Walvis Bay chromosome

characteristic: title


characteristic: External Id

text: DOEM 2007

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Gram+

characteristic: Gram Staining

text: NCBI

text: live

text: isolated by Maria Westerholm et al

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: The reactor had an organic loading rate of 3.0 g VS (l day)−1 and the sludge of the reactor had accumulated high levels of ammonium (6.4 g NH4+?N l−1) and volatile acids due to recirculation of the process liquid.

characteristic: Source of Isolate

text: Sporulating

characteristic: Sporulation

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Sludge

characteristic: environment

text: Sweden

characteristic: geo loc name

characteristic: investigation type

text: isolated from an ammonium-rich, mesophilic, methanogenic a continuously stirred laboratory-scale reactor designated Recirc that operated at 37 ?C and was fed with alfalfa silage

characteristic: isolation site

text: ammonium-rich, mesophilic methanogenic a continuously stirred laboratory-scale reactor

characteristic: isolation source

text: 59.865 N 17.630 E

characteristic: lat lon

text: Motile

characteristic: motility

text: Tepidanaerobacter acetatoxydans Re1

characteristic: ph

text: Tepidanaerobacter sp. Re1

text: aerobe

characteristic: temperature optimum

text: Mesophile

text: Tepidanaerobacter sp. Re1, complete genome.


text: Gastrointestinal tract

characteristic: Body Sample Site

characteristic: External Id

text: DOE-GEBA 2009

characteristic: Funding Program

text: Prodigal 1.4, GenePRIMP

characteristic: Gene Calling Method

text: Gram-

text: Sus scrofa

characteristic: Host Name

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: SRA accession

text: Nonsporulating

text: Yes

characteristic: Type Strain

text: free living

characteristic: biotic relationship

text: Rod-shaped

characteristic: cell shape

text: USA

characteristic: country

text: Keywords: GSC:MIGS:2.1

text: Host

text: Pig faeces, swine manure; USA

text: feces

characteristic: isolation-source

text: Bacteroides coprosuis DSM 18011

characteristic: organism

text: Bacteroides coprosuis PC 139, DSM 18011

characteristic: project name

text: DSM 18011, CCUG 50528, NRRL B-41113

text: DSM 18011

characteristic: strain

text: Mesophile

characteristic: temperature range

text: Bacteroides coprosuis DSM 18011 chromosome

characteristic: title

text: type strain of Bacteroides coprosuis

characteristic: type material


text: Bacteremia

characteristic: Diseases

characteristic: External Id

text: DOE-JBEI 2008

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Gram-

characteristic: Gram Staining

text: homo sapiens, soil

characteristic: Host Name

text: NCBI

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Rice paddy

characteristic: Source of Isolate

text: No

text: Rod-shaped

text: Japan

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Host, Soil

characteristic: environment

text: Bacteremia

characteristic: host health

characteristic: investigation type

text: rice paddy

text: Motile

characteristic: motility

text: Pseudomonas fulva 12-X

text: Pseudomonas fulva 12-X

text: Pseudomonas fulva 12-X, complete genome.


text: DOE-LSP 2007

text: Gram+

characteristic: Greengenes ID

text: NCBI

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: isolated by Cheryl Kuske

characteristic: Isolation Comments

text: Generic

characteristic: SRA accession

text: free living

characteristic: biotic relationship

characteristic: collection date

characteristic: depth

text: Keywords: GSC:MIGS:2.1

text: Desert Soil, Soil

text: USA

characteristic: geo loc name

text: desert soil crust

characteristic: isolation source

text: 32.530544 N 106.723473 W

characteristic: lat lon

text: Motile

text: Microcoleus vaginatus FGP-2

characteristic: organism

text: Microcoleus vaginatus FGP-2

characteristic: project name

characteristic: strain

text: Mesophile

characteristic: temperature range

text: Generic sample from Microcoleus vaginatus FGP-2

characteristic: title


characteristic: External Id

characteristic: GOLD Stamp ID

text: Prodigal 1.4, GenePRIMP

characteristic: Gene Calling Method

text: Gram-

characteristic: Gram Staining

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: free living

text: Rod-shaped

characteristic: cell shape

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Host

characteristic: environment

text: rape

characteristic: host

characteristic: investigation type

text: Motile

characteristic: motility

text: Serratia plymuthica AS9

text: Serratia sp. AS9

text: facultative

text: Mesophile

text: Serratia sp. AS9, complete genome.


text: DOE-CSP 2010

characteristic: Funding Program

text: Prodigal 1.4, GenePRIMP

text: Gram-

text: (seagrass) Posidonia oceanica

characteristic: Host Name

text: NCBI

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: isolated by Sanchez-Amat et al

characteristic: Isolation Comments

text: Generic

characteristic: SRA accession

text: free living

characteristic: biotic relationship

text: Rod-shaped

text: Spain

characteristic: country

text: Keywords: GSC:MIGS:2.1

text: Marine

text: seagrass Posidonia oceanica in different meadows in the coast of the 76 Balearic Islands (Spain)

characteristic: isolation site

text: seagrass from different meadows in the coast of 76 Balearic Islands

characteristic: isolation-source

text: Motile

text: Marinomonas posidonica IVIA-Po-181

characteristic: organism

text: Marinomonas posidonica IVIA-Po-181

characteristic: project name

text: aerobe

characteristic: strain

text: Mesophile

text: Marinomonas posidonica IVIA-Po-181, complete genome.


characteristic: External Id

characteristic: GOLD Stamp ID

text: Prodigal 1.4, GenePRIMP

characteristic: Gene Calling Method

text: Gram-

characteristic: Gram Staining

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: free living

text: Rod-shaped

characteristic: cell shape

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Host

characteristic: environment

text: rape

characteristic: host

text: Motile

text: Serratia sp. AS12

text: Serratia sp. AS12

text: facultative

text: Mesophile

characteristic: temperature range

text: Serratia sp. AS12, complete genome.

characteristic: title


text: DOE-CSP 2008

characteristic: Funding Program

text: Gram-

characteristic: Greengenes ID

text: NCBI

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: isolated by R. Whittenbury

characteristic: Isolation Comments

text: Generic

characteristic: SRA accession

text: Yes

characteristic: Type Strain

characteristic: collection date

text: Keywords: GSC:MIGS:2.1

text: Soil

text: United Kingdom

characteristic: geo loc name

characteristic: investigation type

text: muddy water

characteristic: isolation source

text: Motile

characteristic: motility

text: Methylomicrobium album BG8

characteristic: organism

text: Methylomicrobium album BG8

text: ATCC 33003, NCIB 11123

text: obligate aerobe

characteristic: temperature optimum

text: Mesophile

text: Sample from Methylomicrobium album BG8

text: methanotroph

text: type strain of Methylomicrobium album

characteristic: type material


characteristic: External Id

text: DOE-CSP 2009

characteristic: GOLD Stamp ID

text: Prodigal 1.4, GenePRIMP

characteristic: Gene Calling Method

text: Gram-

characteristic: Gram Staining

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: free living

characteristic: biotic relationship

text: USA

characteristic: country

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Fresh water, Oil fields, Sludge, Soil

characteristic: environment

text: PAH contaminated soils in Wisconsin

characteristic: isolation site

text: PAH-contaminated soil

characteristic: isolation-source

text: Delftia sp. Cs1-4

text: Delftia sp. Cs1-4

characteristic: project name

text: aerobe

characteristic: strain

text: Mesophile

characteristic: temperature range

text: Delftia sp. Cs1-4, complete genome.

characteristic: title


characteristic: External Id

text: DOE-CSP 2009

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Gram+

text: NCBI

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: isolated by Sofiya N. Parshina

characteristic: Isolation Comments

text: Generic

characteristic: SRA accession

text: Sporulating

characteristic: Sporulation

text: Yes

characteristic: Type Strain

text: free living

text: Rod-shaped

characteristic: cell shape

text: Netherlands

text: Keywords: GSC:MIGS:2.1

text: Animal intestinal microflora, Fresh water, Mud, Sea water, Soil

characteristic: investigation type

text: Sludge from an anaerobic bioreactor treating paper mill wastewater

text: sludge from an anaerobic bioreactor treating paper mill wastewater

text: 52.104217 N 6.060133 E

characteristic: lat lon

text: Motile

characteristic: motility

text: Desulfotomaculum nigrificans CO-1-SRB

characteristic: organism

characteristic: ph

text: Desulfotomaculum carboxydivorans CO-1-SRB, DSM 14880

text: DSM 14880

text: obligate anaerobe

characteristic: temperature optimum

text: Mesophile

text: Desulfotomaculum carboxydivorans CO-1-SRB, complete genome.

text: type strain of Desulfotomaculum carboxydivorans

characteristic: type material


characteristic: External Id

text: DOE-CSP 2008

characteristic: Funding Program

text: Gram-

characteristic: Gram Staining

characteristic: Greengenes ID

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Yes

text: free living

characteristic: biotic relationship

text: Coccus-shaped

text: Iceland

characteristic: country

text: Keywords: GSC:MIGS:2.1

characteristic: description

text: Marine, Submarine

characteristic: environment

text: Shallow submarine vent system at the Kolbeinsey ridge Iceland

characteristic: isolation site

text: shallow subarine vent system at the Kolbeinskey Ridge

characteristic: isolation-source

text: 66.780217 N 18.480835 W

text: Methanotorris igneus Kol 5

text: Methanotorris igneus Kol5, DSM 5666

characteristic: project name

text: DSM 5666

text: anaerobe

text: Kol 5

characteristic: strain

text: Hyperthermophile

characteristic: temperature range

text: Methanotorris igneus Kol 5, complete genome.

characteristic: title

text: chemolithoautotroph

text: type strain of Methanotorris igneus


characteristic: External Id

text: DOE-CSP 2010

characteristic: Funding Program

characteristic: GOLD Stamp ID

text: Prodigal 1.4, GenePRIMP

characteristic: Gene Calling Method

text: Gram-

text: NCBI

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: SRA accession

text: free living

text: Keywords: GSC:MIGS:2.1

text: Soil

characteristic: investigation type

text: soil

text: soil

text: Methylomonas methanica MC09

characteristic: organism

text: Methylomonas methanica MC09

text: aerobe

text: Mesophile

text: Methylomonas methanica MC09, complete genome.


text: DOE-CSP 2009

text: Gram+

characteristic: Gram Staining

text: NCBI

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: isolated by T.N. Nazina

characteristic: Isolation Comments

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Sporulating

characteristic: Sporulation

text: Yes

characteristic: Type Strain

text: free living

characteristic: biotic relationship

text: Rod-shaped

characteristic: cell shape

characteristic: collection date

text: Georgia

characteristic: country

text: Keywords: GSC:MIGS:2.1

characteristic: description

characteristic: environment

text: underground thermal mineral water

text: underground thermal mineral water

text: 43.009 N 40.989 E

characteristic: lat lon

text: Motile

characteristic: motility

text: Desulfofundulus kuznetsovii DSM 6115

text: Desulfotomaculum kuznetsovii 17, DSM 6115

text: DSM 6115

text: obligate anaerobe

text: DSM 6115

characteristic: temperature optimum

text: Mesophile

text: Desulfotomaculum kuznetsovii DSM 6115, complete genome.

text: type strain of Desulfofundulus kuznetsovii

characteristic: type material