text: live

text: Metagenome or environmental

text: China:Guangzhou

text: Gallus gallus

text: intestinal sample

text: 23.14 N 113.28 E

text: metagenome

text: biological replicate 2

text: CB-CI group biological replicate 2


status: PUBLIC

characteristic: External Id

text: Guangdong Academy of Agricultural Sciences

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

tag: attribute

characteristic: collection date

text: China:Guangzhou

characteristic: geo loc name

text: Gallus gallus

characteristic: host

text: intestinal sample

characteristic: isolation source

text: 23.14 N 113.28 E

characteristic: lat lon

text: metagenome

characteristic: organism

text: biological replicate 3

characteristic: replicate

characteristic: sample id

text: CB-CI group biological replicate 3

characteristic: title


text: live

text: Metagenome or environmental

text: China:Guangzhou

text: Gallus gallus

text: intestinal sample

text: 23.14 N 113.28 E

text: metagenome

text: biological replicate 4

text: CB-CI group biological replicate 4


text: live

text: Metagenome or environmental

text: China:Guangzhou

text: Gallus gallus

text: intestinal sample

text: 23.14 N 113.28 E

text: metagenome

text: biological replicate 1

text: VAC-CI_group biological replicate 1


text: live

text: Metagenome or environmental

text: China:Guangzhou

text: Gallus gallus

text: intestinal sample

text: 23.14 N 113.28 E

text: metagenome

text: biological replicate 2

text: VAC-CI_group biological replicate 2


text: live

text: Metagenome or environmental

text: China:Guangzhou

text: Gallus gallus

text: intestinal sample

text: 23.14 N 113.28 E

text: metagenome

text: biological replicate 3

text: VAC-CI_group biological replicate 3


text: live

text: Metagenome or environmental

text: China:Guangzhou

text: Gallus gallus

text: intestinal sample

text: 23.14 N 113.28 E

text: metagenome

text: biological replicate 4

text: VAC-CI_group biological replicate 4


text: Peking Union Medical College&Chinese Academy of Medical Sciences

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

characteristic: cell type

text: wild type

characteristic: genotype

text: Mus musculus

text: mononuclear macrophages

text: leukemia cellsin mouse macrophage

characteristic: tissue

text: WT Raw264.7 rep1


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: wild type

text: Mus musculus

text: mononuclear macrophages

text: leukemia cellsin mouse macrophage

text: WT Raw264.7 rep2


text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Fbl+/-

text: Mus musculus

text: mononuclear macrophages

text: leukemia cellsin mouse macrophage

text: Fbl+/- Raw264.7 rep1


text: live

text: Generic

text: Fbl+/-

text: Mus musculus

text: mononuclear macrophages

text: leukemia cellsin mouse macrophage

text: Fbl+/- Raw264.7 rep2


text: live

text: Generic

text: wild type

text: Mus musculus

text: mononuclear macrophages

text: leukemia cellsin mouse macrophage


text: Wenzhou Medical University

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.wastewater

characteristic: collection date

text: Keywords: GSC:MIxS;MIMS:5.0

characteristic: description

text: not collected

text: not collected

text: not collected

text: China:Zhejiang

characteristic: geo loc name

text: 27.03 N 119.37 E

characteristic: lat lon

text: wastewater metagenome

text: MIMS Environmental/Metagenome sample from wastewater metagenome


text: Wenzhou Medical University

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMS:5.0

text: not collected

text: not collected

text: not collected

text: China:Zhejiang

text: 27.03 N 119.38 E

text: wastewater metagenome

characteristic: organism

characteristic: title


text: Wenzhou Medical University

characteristic: INSDC secondary accession

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.wastewater

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIMS:5.0

text: not collected

text: not collected

text: not collected

text: China:Zhejiang

text: 27.03 N 119.39 E

text: wastewater metagenome


text: Wenzhou Medical University

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMS:5.0

text: not collected

text: not collected

text: not collected

text: China:Zhejiang

text: 27.03 N 119.40 E

text: wastewater metagenome


text: Wenzhou Medical University

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMS:5.0

text: not collected

text: not collected

text: not collected

text: China:Zhejiang

text: 27.03 N 119.41 E

text: wastewater metagenome


text: Wenzhou Medical University

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMS:5.0

text: not collected

text: not collected

text: not collected

text: China:Zhejiang

text: 27.03 N 119.42 E

text: wastewater metagenome


text: Wenzhou Medical University

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMS:5.0

text: not collected

text: not collected

text: not collected

text: China:Zhejiang

text: 27.03 N 119.43 E

text: wastewater metagenome


text: Wenzhou Medical University

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMS:5.0

text: not collected

text: not collected

text: not collected

text: China:Zhejiang

text: 27.03 N 119.44 E

text: wastewater metagenome


text: Wenzhou Medical University

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMS:5.0

text: not collected

text: not collected

text: not collected

text: China:Zhejiang

text: 27.03 N 119.45 E

text: wastewater metagenome


text: Wenzhou Medical University

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMS:5.0

text: not collected

text: not collected

text: not collected

text: China:Zhejiang

text: 27.03 N 119.46 E

text: wastewater metagenome


text: Wenzhou Medical University

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMS:5.0

text: not collected

text: not collected

text: not collected

text: China:Zhejiang

text: 27.03 N 119.47 E

text: wastewater metagenome


text: Wenzhou Medical University

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMS:5.0

text: not collected

text: not collected

text: not collected

text: China:Zhejiang

text: 27.03 N 119.48 E

text: wastewater metagenome


text: Morita lab, Department of Molecular Medicine, University of Texas Health Science Center at San Antonio

text: live

text: Generic

text: male

characteristic: gender

text: Mus musculus

text: Liver

characteristic: strain

text: Liver

text: Untreated

characteristic: treatment


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: male

text: Mus musculus

text: Liver

text: Liver

characteristic: tissue

text: Treated with iD1


text: College of Medicine, Pharmacology, Penn State University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: mouse individuals

text: Mus musculus

text: male

characteristic: sex

text: olfactory bulb

text: ipsi (LPS-treated side)


text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Mus musculus

text: male

text: olfactory bulb

text: contra (non-treated side)


text: Guangdong Ocean University

text: live

text: Microbe, viral or environmental

characteristic: alternate id

characteristic: collection date

text: China: Zhanjiang,Guangdong Province

characteristic: geo loc name

text: Nile tilapia, O. niloticus

characteristic: host

text: Local fish farm (pond)

characteristic: isolation source

text: Bacillus velezensis

characteristic: organism

text: Whole organism

characteristic: sample type

text: Microbe sample from Bacillus velezensis


characteristic: External Id

text: Guangdong Ocean University

text: live

text: Microbe, viral or environmental

text: China: Zhanjiang,Guangdong Province

text: Nile tilapia, O. niloticus

text: Local fish farm (pond)

text: Bacillus subtilis

text: Whole organism

characteristic: strain

text: Microbe sample from Bacillus subtilis

characteristic: title


text: Guangdong Ocean University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: China: Zhanjiang,Guangdong Province

text: Nile tilapia, O. niloticus

text: Local fish farm (pond)

text: Bacillus amyloliquefaciens

text: Whole organism

text: Microbe sample from Bacillus amyloliquefaciens


text: Centre for research in biotechnology for agriculture (CEBAR), University of Malaya

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Plant

characteristic: SRA accession

characteristic: age

text: B. rotunda L. Mansf

characteristic: cultivar

characteristic: dev stage

text: Malaysia

characteristic: ecotype

text: Malaysia

text: ex-vitro leaf 1

characteristic: isolate

text: Boesenbergia rotunda

text: Leaf

characteristic: tissue


text: live

text: Plant

characteristic: NCBI submission model

characteristic: NCBI submission package

text: B. rotunda L. Mansf

text: Malaysia

text: Malaysia

characteristic: geo loc name

text: ex-vitro leaf 2

text: Boesenbergia rotunda

characteristic: organism

text: Leaf


characteristic: External Id

text: live

text: Plant

text: B. rotunda L. Mansf

text: Malaysia

text: Malaysia

text: ex-vitro leaf 3

text: Boesenbergia rotunda

text: Leaf

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Plant

text: B. rotunda L. Mansf

text: Malaysia

text: Malaysia

text: In-vitro leaf 1

text: Boesenbergia rotunda

text: In-vitro leaf


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Plant

text: B. rotunda L. Mansf

text: Malaysia

text: Malaysia

text: in-vitro leaf 2

text: Boesenbergia rotunda

text: in-vitro leaf


text: live

characteristic: INSDC status

text: Plant

characteristic: SRA accession

text: B. rotunda L. Mansf

text: Malaysia

text: Malaysia

text: in-vitro leaf 3

text: Boesenbergia rotunda

text: in-vitro leaf


text: live

text: Plant

characteristic: age

text: B. rotunda L. Mansf

characteristic: cultivar

text: Malaysia

text: Malaysia

text: Embryogenic callus 1

text: Boesenbergia rotunda

text: Embryogenic callus


text: live

text: Plant

text: B. rotunda L. Mansf

characteristic: dev stage

text: Malaysia

characteristic: ecotype

text: Malaysia

text: Embryogenic callus 2

text: Boesenbergia rotunda

text: Embryogenic callus


text: live

text: Plant

text: B. rotunda L. Mansf

text: Malaysia

text: Malaysia

text: Embryogenic callus 3

characteristic: isolate

text: Boesenbergia rotunda

text: Embryogenic callus

characteristic: tissue


text: live

text: Plant

characteristic: NCBI submission model

characteristic: NCBI submission package

text: B. rotunda L. Mansf

text: Malaysia

text: Malaysia

text: Dry callus 1

text: Boesenbergia rotunda

text: Dry callus


text: live

text: Plant

text: B. rotunda L. Mansf

text: Malaysia

text: Malaysia

characteristic: geo loc name

text: Dry callus 2

text: Boesenbergia rotunda

characteristic: organism

text: Dry callus


characteristic: External Id

text: live

text: Plant

text: B. rotunda L. Mansf

text: Malaysia

text: Malaysia

text: Dry callus 3

text: Boesenbergia rotunda

text: Dry callus

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Plant

text: B. rotunda L. Mansf

text: Malaysia

text: Malaysia

text: Watery callus 1

text: Boesenbergia rotunda

text: Watery callus


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Plant

text: B. rotunda L. Mansf

text: Malaysia

text: Malaysia

text: Watery callus 2

text: Boesenbergia rotunda

text: Watery callus


text: live

characteristic: INSDC status

text: Plant

characteristic: SRA accession

text: B. rotunda L. Mansf

text: Malaysia

text: Malaysia

text: Watery callus 3

text: Boesenbergia rotunda

text: Watery callys


CMW 25512

text: Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria

text: live

text: MIGS.eu

text: MIGS/MIMS/MIMARKS.host-associated

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: P. tecunumanii seedling

text: Seedling nursery

text: Pine seedling

text: Colombia:Volconda

text: Pinus tecunumanii

characteristic: host

text: DNA isolated from mycelium grown in culture

text: 4.0297222 N 76.4183334 W

characteristic: lat lon

text: Fusarium marasasianum

text: CMW 25512

characteristic: strain

text: MIGS Eukaryotic sample from Fusarium marasasianum


text: Integrative Biology, Research Unit of Radiation Cytogenetics, Helmholtz-Zentrum München

text: live

text: Generic

characteristic: NCBI submission model

text: tumor cell

characteristic: cell type

text: cancer

characteristic: disease state

text: Homo sapiens

text: head and neck squamous cell carcinoma


CECT 7219

text: Technische Universitaet Muenchen

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: culture collection

text: Japan

characteristic: geo loc name

text: Japanese salty food

characteristic: isolation source

text: Chromohalobacter japonicus

characteristic: organism

text: bacteria

characteristic: sample type

text: CECT 7219

text: Microbe sample from Chromohalobacter japonicus

text: type strain of Chromohalobacter japonicus

characteristic: type material


DSM 7218

characteristic: External Id

text: Technische Universitaet Muenchen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: Baltic Sea

text: salted beans

text: Chromohalobacter beijerinckii

text: bacteria

text: DSM 7218

text: Microbe sample from Chromohalobacter beijerinckii

characteristic: title

text: type strain of Chromohalobacter beijerinckii


DSM 14323

text: Technische Universitaet Muenchen

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: Chile: Atacama Saltern

text: Lake Tebenquiche

text: Chromohalobacter nigrandesensis

text: bacteria

text: DSM 14323

characteristic: strain

text: Microbe sample from Chromohalobacter nigrandesensis

text: type strain of Chromohalobacter nigrandesensis


DSM 15547

text: Technische Universitaet Muenchen

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: Bolivia: Andean region

text: Saline soils

text: Chromohalobacter sarecensis

text: bacteria

text: DSM 15547

text: Microbe sample from Chromohalobacter sarecensis

text: type strain of Chromohalobacter sarecensis


characteristic: Grid

text: California State University Northridge

characteristic: INSDC secondary accession

text: live

text: MIMARKS.survey

characteristic: SRA accession

characteristic: Terrace

text: 150 cm

characteristic: depth

text: Keywords: GSC:MIxS;MIMARKS:5.0

characteristic: description

text: 106 m

characteristic: elev

text: soil biome (ENVO:00000428)

text: USA

text: 36.973 N 122.085 W

characteristic: lat lon

text: soil metagenome

characteristic: sample id

text: Santa Cruz

characteristic: site

text: MIMARKS Survey related sample from soil metagenome


characteristic: External Id

text: California State University Northridge

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIMARKS.survey

characteristic: NCBI submission package

text: 150 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: 194 m

text: soil biome (ENVO:00000428)

text: USA

characteristic: geo loc name

text: 36.973 N 122.085 W

text: soil metagenome

characteristic: organism

text: Santa Cruz


text: California State University Northridge

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIMARKS.survey

characteristic: NCBI submission model

characteristic: collection date

text: 150 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: 67 m

text: soil biome (ENVO:00000428)

text: USA

text: 36.973 N 122.085 W

text: soil metagenome

text: Santa Cruz

characteristic: title


characteristic: Grid

text: California State University Northridge

characteristic: INSDC secondary accession

text: live

text: MIMARKS.survey

characteristic: SRA accession

characteristic: Terrace

text: 180 cm

characteristic: depth

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: 262 m

text: soil biome (ENVO:00000428)

text: USA

text: 40.283 N 124.349 W

text: soil metagenome

text: Mattole


text: California State University Northridge

text: live

text: MIMARKS.survey

text: 160 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

characteristic: description

text: 309 m

characteristic: elev

text: soil biome (ENVO:00000428)

text: USA

text: 40.283 N 124.349 W

characteristic: lat lon

text: soil metagenome

characteristic: sample id

text: Mattole

characteristic: site


characteristic: External Id

text: California State University Northridge

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIMARKS.survey

characteristic: NCBI submission package

text: 130 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: 14 m

text: soil biome (ENVO:00000428)

text: USA

characteristic: geo loc name

text: 36.973 N 122.085 W

text: soil metagenome

text: Santa Cruz


text: California State University Northridge

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIMARKS.survey

characteristic: NCBI submission model

characteristic: collection date

text: 120 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: 100 m

text: soil biome (ENVO:00000428)

text: USA

text: 40.283 N 124.349 W

text: soil metagenome

characteristic: organism

text: Mattole


characteristic: Grid

text: California State University Northridge

characteristic: INSDC secondary accession

text: live

text: MIMARKS.survey

characteristic: SRA accession

characteristic: Terrace

text: 200 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: 408 m

text: soil biome (ENVO:00000428)

text: USA

text: 40.283 N 124.349 W

text: soil metagenome

text: Mattole

characteristic: title


text: California State University Northridge

text: live

text: MIMARKS.survey

text: 130 cm

characteristic: depth

text: Keywords: GSC:MIxS;MIMARKS:5.0

characteristic: description

text: 14 m

characteristic: elev

text: soil biome (ENVO:00000428)

text: USA

text: 40.283 N 124.349 W

characteristic: lat lon

text: soil metagenome

characteristic: sample id

text: Santa Cruz


characteristic: External Id

text: California State University Northridge

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIMARKS.survey

characteristic: NCBI submission package

text: 200 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: 408 m

text: soil biome (ENVO:00000428)

text: USA

text: 36.973 N 122.085 W

text: soil metagenome

text: Mattole

characteristic: site


text: Department of Cardiology, Third Xinagya Hospital

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Isolated liver parenchymal cells

characteristic: cell type

text: Mus musculus

text: male

characteristic: sex

text: liver parenchymal cells

characteristic: strain

text: liver

characteristic: tissue

text: Liver parenchymal cells-control

text: Mice were injected with saline

characteristic: treatment


characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: Isolated liver parenchymal cells

text: Mus musculus

characteristic: organism

text: male

text: liver parenchymal cells

text: liver

text: Liver parenchymal cells-poly(I:C) 7h+LPS 3h

characteristic: title

text: Mice were primed with poly(I:C) for 7 hours and later received LPS for 3 hours


characteristic: External Id

text: live

text: Generic

text: Isolated liver parenchymal cells

text: Mus musculus

text: male

text: liver parenchymal cells

text: liver

text: Liver parenchymal cells-poly(I:C) 7h+LPS 12h

text: Mice were primed with poly(I:C) for 7 hours and later received LPS for 12 hours


text: The University of Melbourne

characteristic: INSDC center name

text: live

text: Invertebrate

text: Inocula B1_R1

characteristic: attributes

characteristic: collection date

text: Australia

characteristic: geo loc name

text: Laboratory

characteristic: isolation source

text: Breviolum minutum

characteristic: temp

text: Culture

text: Inocula B1_R1


text: The University of Melbourne

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Invertebrate

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Inocula B1_R2

text: Australia

text: Laboratory

text: Breviolum minutum

text: Culture

text: Inocula B1_R2


text: The University of Melbourne

text: live

text: Invertebrate

text: Inocula SS1_R1

text: Australia

text: Laboratory

text: Cladocopium sp. C1acro

text: Culture

characteristic: tissue

text: Inocula SS1_R1


text: The University of Melbourne

characteristic: INSDC secondary accession

text: live

text: Invertebrate

text: Inocula SS1_R2

text: Australia

text: Laboratory

text: Cladocopium sp. C1acro

text: Culture

text: Inocula SS1_R2


text: The University of Melbourne

text: live

text: Invertebrate

characteristic: SRA accession

text: Inocula SS3_R1

text: Australia

text: Laboratory

text: Cladocopium sp. C1acro

text: Culture

text: Inocula SS3_R1


text: The University of Melbourne

text: live

text: Invertebrate

text: Inocula SS3_R2

text: Australia

text: Laboratory

text: Cladocopium sp. C1acro

characteristic: organism

text: Culture

text: Inocula SS3_R2


text: The University of Melbourne

text: live

text: Invertebrate

text: Inocula SS5_R1

text: Australia

text: Laboratory

text: Cladocopium sp. C1acro

text: Culture

text: Inocula SS5_R1

characteristic: title


characteristic: External Id

text: The University of Melbourne

text: live

text: Invertebrate

text: Inocula SS5_R2

text: Australia

text: Laboratory

text: Cladocopium sp. C1acro

text: Culture

text: Inocula SS5_R2


text: The University of Melbourne

characteristic: INSDC center name

text: live

text: Invertebrate

text: Inocula SS7_R1

text: Australia

text: Laboratory

text: Cladocopium sp. C1acro

text: Culture

text: Inocula SS7_R1


text: The University of Melbourne

text: live

text: Invertebrate

text: Inocula SS7_R2

characteristic: attributes

text: Australia

text: Laboratory

text: Cladocopium sp. C1acro

text: Culture

text: Inocula SS7_R2


text: The University of Melbourne

text: live

text: Invertebrate

text: Inocula SS8_R1

characteristic: collection date

text: Australia

text: Laboratory

text: Cladocopium sp. C1acro

text: Culture

text: Inocula SS8_R1


text: The University of Melbourne

text: live

text: Invertebrate

text: Inocula SS8_R2

text: Australia

characteristic: geo loc name

text: Laboratory

text: Cladocopium sp. C1acro

text: Culture

text: Inocula SS8_R2


text: The University of Melbourne

text: live

text: Invertebrate

text: Inocula SS9_R1

text: Australia

text: Laboratory

characteristic: isolation source

text: Cladocopium sp. C1acro

text: Culture

text: Inocula SS9_R1


text: The University of Melbourne

text: live

text: Invertebrate

text: Inocula SS9_R2

text: Australia

text: Laboratory

text: Cladocopium sp. C1acro

characteristic: temp

text: Culture

text: Inocula SS9_R2


text: The University of Melbourne

characteristic: INSDC first public

text: live

text: Invertebrate

text: Inocula WT10_R1

text: Australia

text: Laboratory

text: Cladocopium sp. C1acro

text: Culture

text: Inocula WT10_R1


text: The University of Melbourne

characteristic: INSDC last update

text: live

text: Invertebrate

text: Inocula WT10_R2

text: Australia

text: Laboratory

text: Cladocopium sp. C1acro

text: Culture

text: Inocula WT10_R2


text: The University of Melbourne

text: live

characteristic: INSDC status

text: Invertebrate

text: Inoculated anemone B1_R1

text: Australia

text: E. diaphana

characteristic: host

text: Laboratory

text: Exaiptasia diaphana

text: Whole anemone

text: Inoculated anemone B1_R1


text: The University of Melbourne

text: live

text: Invertebrate

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Inoculated anemone B1_R2

text: Australia

text: E. diaphana

text: Laboratory

text: Exaiptasia diaphana

text: Whole anemone

text: Inoculated anemone B1_R2


text: The University of Melbourne

characteristic: INSDC secondary accession

text: live

text: Invertebrate

text: Inoculated anemone B1_R3

text: Australia

text: E. diaphana

text: Laboratory

text: Exaiptasia diaphana

text: Whole anemone

characteristic: tissue

text: Inoculated anemone B1_R3


text: The University of Melbourne

text: live

text: Invertebrate

characteristic: SRA accession

text: Inoculated anemone B1_R4

text: Australia

text: E. diaphana

text: Laboratory

text: Exaiptasia diaphana

characteristic: organism

text: Whole anemone

text: Inoculated anemone B1_R4


characteristic: External Id

text: The University of Melbourne

text: live

text: Invertebrate

text: Inoculated anemone SS1_R1

text: Australia

text: E. diaphana

text: Laboratory

text: Exaiptasia diaphana

text: Whole anemone

text: Inoculated anemone SS1_R1

characteristic: title


text: The University of Melbourne

characteristic: INSDC center name

text: live

text: Invertebrate

text: Inoculated anemone SS1_R2

characteristic: attributes

text: Australia

text: E. diaphana

text: Laboratory

text: Exaiptasia diaphana

text: Whole anemone

text: Inoculated anemone SS1_R2


text: The University of Melbourne

text: live

text: Invertebrate

text: Inoculated anemone SS1_R3

characteristic: collection date

text: Australia

characteristic: geo loc name

text: E. diaphana

text: Laboratory

text: Exaiptasia diaphana

text: Whole anemone

text: Inoculated anemone SS1_R3


text: The University of Melbourne

text: live

text: Invertebrate

text: Inoculated anemone SS1_R4

text: Australia

text: E. diaphana

text: Laboratory

characteristic: isolation source

text: Exaiptasia diaphana

characteristic: temp

text: Whole anemone

text: Inoculated anemone SS1_R4


text: The University of Melbourne

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Invertebrate

text: Inoculated anemone SS3_R1

text: Australia

text: E. diaphana

text: Laboratory

text: Exaiptasia diaphana

text: Whole anemone

text: Inoculated anemone SS3_R1


text: The University of Melbourne

text: live

characteristic: INSDC status

text: Invertebrate

text: Inoculated anemone SS3_R2

text: Australia

text: E. diaphana

characteristic: host

text: Laboratory

text: Exaiptasia diaphana

text: Whole anemone

text: Inoculated anemone SS3_R2


text: The University of Melbourne

text: live

text: Invertebrate

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Inoculated anemone SS3_R3

text: Australia

text: E. diaphana

text: Laboratory

text: Exaiptasia diaphana

text: Whole anemone

text: Inoculated anemone SS3_R3


text: The University of Melbourne

characteristic: INSDC secondary accession

text: live

text: Invertebrate

text: Inoculated anemone SS3_R4

text: Australia

text: E. diaphana

text: Laboratory

text: Exaiptasia diaphana

text: Whole anemone

characteristic: tissue

text: Inoculated anemone SS3_R4


text: The University of Melbourne

text: live

text: Invertebrate

characteristic: SRA accession

text: Inoculated anemone SS5_R1

text: Australia

text: E. diaphana

text: Laboratory

text: Exaiptasia diaphana

characteristic: organism

text: Whole anemone

text: Inoculated anemone SS5_R1


characteristic: External Id

text: The University of Melbourne

text: live

text: Invertebrate

text: Inoculated anemone SS5_R2

text: Australia

text: E. diaphana

text: Laboratory

text: Exaiptasia diaphana

text: Whole anemone

text: Inoculated anemone SS5_R2

characteristic: title


text: The University of Melbourne

characteristic: INSDC center name

text: live

text: Invertebrate

text: Inoculated anemone SS5_R3

characteristic: attributes

text: Australia

text: E. diaphana

text: Laboratory

text: Exaiptasia diaphana

text: Whole anemone

text: Inoculated anemone SS5_R3


text: The University of Melbourne

text: live

text: Invertebrate

text: Inoculated anemone SS5_R4

characteristic: collection date

text: Australia

characteristic: geo loc name

text: E. diaphana

text: Laboratory

text: Exaiptasia diaphana

text: Whole anemone

text: Inoculated anemone SS5_R4


text: The University of Melbourne

text: live

text: Invertebrate

text: Inoculated anemone SS7_R1

text: Australia

text: E. diaphana

text: Laboratory

characteristic: isolation source

text: Exaiptasia diaphana

characteristic: temp

text: Whole anemone

text: Inoculated anemone SS7_R1


text: The University of Melbourne

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Invertebrate

text: Inoculated anemone SS7_R2

text: Australia

text: E. diaphana

text: Laboratory

text: Exaiptasia diaphana

text: Whole anemone

text: Inoculated anemone SS7_R2


text: The University of Melbourne

text: live

characteristic: INSDC status

text: Invertebrate

text: Inoculated anemone SS7_R3

text: Australia

text: E. diaphana

characteristic: host

text: Laboratory

text: Exaiptasia diaphana

text: Whole anemone

text: Inoculated anemone SS7_R3


text: The University of Melbourne

text: live

text: Invertebrate

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Inoculated anemone SS7_R4

text: Australia

text: E. diaphana

text: Laboratory

text: Exaiptasia diaphana

text: Whole anemone

text: Inoculated anemone SS7_R4


text: The University of Melbourne

characteristic: INSDC secondary accession

text: live

text: Invertebrate

text: Inoculated anemone SS8_R1

text: Australia

text: E. diaphana

text: Laboratory

text: Exaiptasia diaphana

text: Whole anemone

characteristic: tissue

text: Inoculated anemone SS8_R1


text: The University of Melbourne

text: live

text: Invertebrate

characteristic: SRA accession

text: Inoculated anemone SS8_R2

text: Australia

text: E. diaphana

text: Laboratory

text: Exaiptasia diaphana

characteristic: organism

text: Whole anemone

text: Inoculated anemone SS8_R2


characteristic: External Id

text: The University of Melbourne

text: live

text: Invertebrate

text: Inoculated anemone SS8_R3

text: Australia

text: E. diaphana

text: Laboratory

text: Exaiptasia diaphana

text: Whole anemone

text: Inoculated anemone SS8_R3

characteristic: title


text: The University of Melbourne

characteristic: INSDC center name

text: live

text: Invertebrate

text: Inoculated anemone SS8_R4

characteristic: attributes

text: Australia

text: E. diaphana

text: Laboratory

text: Exaiptasia diaphana

text: Whole anemone

text: Inoculated anemone SS8_R4


text: The University of Melbourne

text: live

text: Invertebrate

text: Inoculated anemone SS9_R1

characteristic: collection date

text: Australia

characteristic: geo loc name

text: E. diaphana

text: Laboratory

text: Exaiptasia diaphana

text: Whole anemone

text: Inoculated anemone SS9_R1


text: The University of Melbourne

text: live

text: Invertebrate

text: Inoculated anemone SS9_R2

text: Australia

text: E. diaphana

text: Laboratory

characteristic: isolation source

text: Exaiptasia diaphana

characteristic: temp

text: Whole anemone

text: Inoculated anemone SS9_R2


text: The University of Melbourne

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Invertebrate

text: Inoculated anemone SS9_R3

text: Australia

text: E. diaphana

text: Laboratory

text: Exaiptasia diaphana

text: Whole anemone

text: Inoculated anemone SS9_R3


text: The University of Melbourne

text: live

characteristic: INSDC status

text: Invertebrate

text: Inoculated anemone SS9_R4

text: Australia

text: E. diaphana

characteristic: host

text: Laboratory

text: Exaiptasia diaphana

text: Whole anemone

text: Inoculated anemone SS9_R4


text: The University of Melbourne

text: live

text: Invertebrate

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Inoculated anemone WT10_R1

text: Australia

text: E. diaphana

text: Laboratory

text: Exaiptasia diaphana

text: Whole anemone

text: Inoculated anemone WT10_R1


text: The University of Melbourne

characteristic: INSDC secondary accession

text: live

text: Invertebrate

text: Inoculated anemone WT10_R2

text: Australia

text: E. diaphana

text: Laboratory

text: Exaiptasia diaphana

text: Whole anemone

characteristic: tissue

text: Inoculated anemone WT10_R2


text: The University of Melbourne

text: live

text: Invertebrate

characteristic: SRA accession

text: Inoculated anemone WT10_R3

text: Australia

text: E. diaphana

text: Laboratory

text: Exaiptasia diaphana

characteristic: organism

text: Whole anemone

text: Inoculated anemone WT10_R3


characteristic: External Id

text: The University of Melbourne

text: live

text: Invertebrate

text: Inoculated anemone WT10_R4

text: Australia

text: E. diaphana

text: Laboratory

text: Exaiptasia diaphana

text: Whole anemone

text: Inoculated anemone WT10_R4

characteristic: title


text: The University of Melbourne

characteristic: INSDC center name

text: live

text: Invertebrate

text: Extraction Blank 1

characteristic: attributes

text: Australia

text: Extraction blank

characteristic: isolate

text: Laboratory

text: metagenome

text: Extraction Blank 1


text: The University of Melbourne

text: live

text: Invertebrate

text: Extraction Blank 2

characteristic: collection date

text: Australia

characteristic: geo loc name

text: Extraction blank

text: Laboratory

characteristic: isolation source

text: metagenome

text: Extraction Blank 2


text: The University of Melbourne

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Invertebrate

text: Extraction Blank 3

text: Australia

text: Extraction blank

text: Laboratory

text: metagenome

text: Extraction Blank 3


text: The University of Melbourne

text: live

characteristic: INSDC status

text: Invertebrate

text: Extraction Blank 4

text: Australia

text: Extraction blank

text: Laboratory

text: metagenome

text: Extraction Blank 4


text: The University of Melbourne

text: live

text: Invertebrate

characteristic: NCBI submission model

text: PCR Blank 1

text: Australia

text: PCR blank

text: Laboratory

text: metagenome

text: PCR Blank 1


text: The University of Melbourne

text: live

text: Invertebrate

characteristic: NCBI submission package

text: PCR Blank 2

text: Australia

text: PCR blank

text: Laboratory

text: metagenome

text: PCR Blank 2


text: The University of Melbourne

characteristic: INSDC secondary accession

text: live

text: Invertebrate

text: PCR Blank 3

text: Australia

text: PCR blank

text: Laboratory

text: metagenome

text: PCR Blank 3


text: The University of Melbourne

text: live

text: Invertebrate

text: Aposymbiotic 1

text: Australia

text: E. diaphana

characteristic: host

text: Laboratory

text: Exaiptasia diaphana

characteristic: temp

text: Whole anemone

characteristic: tissue

text: Aposymbiotic 1


characteristic: External Id

text: The University of Melbourne

text: live

text: Invertebrate

characteristic: SRA accession

text: Aposymbiotic 2

text: Australia

text: E. diaphana

text: Laboratory

text: Exaiptasia diaphana

characteristic: organism

text: Whole anemone

text: Aposymbiotic 2


text: The University of Melbourne

characteristic: INSDC center name

text: live

text: Invertebrate

text: Aposymbiotic 3

characteristic: attributes

text: Australia

text: E. diaphana

text: Laboratory

text: Exaiptasia diaphana

text: Whole anemone

text: Aposymbiotic 3

characteristic: title


text: The University of Melbourne

text: live

text: Invertebrate

text: Aposymbiotic 4

characteristic: collection date

text: Australia

characteristic: geo loc name

text: E. diaphana

text: Laboratory

text: Exaiptasia diaphana

text: Whole anemone

text: Aposymbiotic 4


text: The University of Melbourne

characteristic: INSDC first public

text: live

text: Invertebrate

text: Aposymbiotic 5

text: Australia

text: E. diaphana

text: Laboratory

characteristic: isolation source

text: Exaiptasia diaphana

text: Whole anemone

text: Aposymbiotic 5


ABLM

text: The University of Melbourne

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Invertebrate

text: Aposymbiotic 6

text: Australia

text: E. diaphana

text: Laboratory

text: Exaiptasia diaphana

text: Whole anemone

text: Aposymbiotic 6


text: Universidade Federal de Sao Paulo

text: live

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Universidade Federal de Sao Paulo

characteristic: collected by

text: This strain is part of a comparative study evaluating E. coli clones isolated from the gut of hospitalized patients with strains causing urinary tract infection in one single center. The Escherichia coli strain SMG017F1 was isolated from a rectal swab from an inpatient with urinary tract infection. This sequence refers to clone F1 from the patient SMG017. The other clones isolated from the rectal swab of the same inpatient are SMG017F2, SMG017F3, and SMG017F8 and the isolated from urine is SMG017U. The strain fulfils the molecular criterium to be classified as ExPEC.

characteristic: description

text: Brazil: Sao Paulo

text: Homo sapiens

characteristic: host age

text: UTI

characteristic: host disease

text: female

characteristic: host sex

text: rectal swab

text: 22.36448060 S 46.94347391 W

characteristic: lat lon

text: Escherichia coli

text: ExPEC

characteristic: pathotype

characteristic: serotype

characteristic: strain

text: Escherichia coli strain SMG017F1, isolated from rectal swab of an inpatient with UTI


characteristic: External Id

text: Universidade Federal de Sao Paulo

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: SRA accession

text: Universidade Federal de Sao Paulo

characteristic: collection date

text: This strain is part of a comparative study evaluating E. coli clones isolated from the gut of hospitalized patients with strains causing urinary tract infection in one single center. The Escherichia coli strain SMG017F2 was isolated from a rectal swab from an inpatient with urinary tract infection. This sequence refers to clone F2 from the patient SMG017. The other clones isolated from the rectal swab of the same inpatient are SMG017F1, SMG017F3, and SMG017F8 and the isolated from urine is SMG017U.

text: Brazil: Sao Paulo

text: Homo sapiens

characteristic: host

text: UTI

text: female

text: rectal swab

text: 22.36448060 S 46.94347391 W

text: Escherichia coli

characteristic: organism

text: Escherichia coli strain SMG017F2, isolated from rectal swab of an inpatient with UTI

characteristic: title


text: Universidade Federal de Sao Paulo

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Universidade Federal de Sao Paulo

characteristic: collected by

text: This strain is part of a comparative study evaluating E. coli clones isolated from the gut of hospitalized patients with strains causing urinary tract infection in one single center. The Escherichia coli strain SMG017F8 was isolated from a rectal swab from an inpatient with urinary tract infection. This sequence refers to clone F8 from the patient SMG017. The other clones isolated from the rectal swab of the same inpatient are SMG017F1, SMG017F2, and SMG017F3 and the isolated from urine is SMG017U.

text: Brazil: Sao Paulo

characteristic: geo loc name

text: Homo sapiens

text: UTI

text: female

text: rectal swab

characteristic: isolation source

text: 22.36448060 S 46.94347391 W

text: Escherichia coli

text: Escherichia coli strain SMG017F8, isolated from rectal swab of an inpatient with UTI


text: Universidade Federal de Sao Paulo

text: live

text: Pathogen.cl

text: Universidade Federal de Sao Paulo

text: This strain is part of a comparative study evaluating E. coli clones isolated from the gut of hospitalized patients with strains causing urinary tract infection in one single center. The Escherichia coli strain SMG017U was isolated from an urine sample from an inpatient with urinary tract infection. Other clones isolated from the rectal swab of the same inpatient are SMG017F1, SMG017F2, SMG017F3, and SMG017F8. The strain fulfils the molecular criteria to be classified as ExPEC and UPEC.

characteristic: description

text: Brazil: Sao Paulo

text: Homo sapiens

characteristic: host age

text: UTI

characteristic: host disease

text: female

characteristic: host sex

text: urine

text: 22.36448060 S 46.94347391 W

characteristic: lat lon

text: Escherichia coli

text: ExPEC

characteristic: pathotype

characteristic: serotype

characteristic: strain

text: Escherichia coli strain SMG017U, isolated from urine of an inpatient with UTI


characteristic: External Id

text: Academia Sinica

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Human

characteristic: SRA accession

characteristic: age

text: Wen-Hwa Lee, Academia Sinica, Taiwan

characteristic: biomaterial provider

characteristic: cell line

text: BxPC-3 monoculture

characteristic: culture condition

text: Homo sapiens

characteristic: organism

text: female

characteristic: sex

text: Human sample from Homo sapiens

characteristic: title


BxPC-3 transwell coculture with HPaSteC

text: Academia Sinica

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Human

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Wen-Hwa Lee, Academia Sinica, Taiwan

text: BxPC-3 transwell coculture with HPaSteC

text: Homo sapiens

text: female

text: Human sample from Homo sapiens


BxPC-3 direct coculture with HPaSteC

text: Academia Sinica

text: live

text: Human

text: Wen-Hwa Lee, Academia Sinica, Taiwan

text: BxPC-3 direct coculture with HPaSteC

text: Homo sapiens

text: female

text: Human sample from Homo sapiens


text: Academia Sinica

text: live

text: Human

text: Wen-Hwa Lee, Academia Sinica, Taiwan

text: SU.86.86 monoculture

text: Homo sapiens

text: female

text: Human sample from Homo sapiens


name: SU.86.86 transwell coculture with HPaSteC

text: Academia Sinica

text: live

text: Human

text: Wen-Hwa Lee, Academia Sinica, Taiwan

text: Homo sapiens

text: female

text: Human sample from Homo sapiens


SU.86.86 direct coculture with HPaSteC

text: Academia Sinica

text: live

text: Human

text: Wen-Hwa Lee, Academia Sinica, Taiwan

text: SU.86.86 direct coculture with HPaSteC

text: Homo sapiens

text: female

text: Human sample from Homo sapiens


HPaSteC

text: Academia Sinica

text: live

text: Human

text: Wen-Hwa Lee, Academia Sinica, Taiwan

text: HPaSteC

text: HPaSteC monoculture

text: Homo sapiens

text: Human sample from Homo sapiens


HPaSteC transwell coculture with BxPC-3

text: Academia Sinica

text: live

text: Human

text: Wen-Hwa Lee, Academia Sinica, Taiwan

text: HPaSteC

text: HPaSteC transwell coculture with BxPC-3

text: Homo sapiens

text: Human sample from Homo sapiens


HPaSteC direct coculture with BxPC-3

text: Academia Sinica

text: live

text: Human

text: Wen-Hwa Lee, Academia Sinica, Taiwan

text: HPaSteC

text: HPaSteC direct coculture with BxPC-3

text: Homo sapiens

text: Human sample from Homo sapiens


name: HPaSteC transwell coculture with SU.86.86

text: Academia Sinica

text: live

text: Human

text: Wen-Hwa Lee, Academia Sinica, Taiwan

text: HPaSteC

text: Homo sapiens

text: Human sample from Homo sapiens


HPaSteC direct coculture with SU.86.86

text: Academia Sinica

text: live

text: Human

text: Wen-Hwa Lee, Academia Sinica, Taiwan

text: HPaSteC

text: HPaSteC direct coculture with SU.86.86

text: Homo sapiens

text: Human sample from Homo sapiens


name: HPaSteC transwell coculture with MIA PaCa-2

text: Academia Sinica

text: live

text: Human

text: Wen-Hwa Lee, Academia Sinica, Taiwan

text: HPaSteC

text: Homo sapiens

text: Human sample from Homo sapiens


name: HPaSteC direct coculture with MIA PaCa-2

text: Academia Sinica

text: live

text: Human

text: Wen-Hwa Lee, Academia Sinica, Taiwan

text: HPaSteC

text: Homo sapiens

text: Human sample from Homo sapiens


HPaSteC transwell coculture with PANC-1

text: Academia Sinica

text: live

text: Human

text: Wen-Hwa Lee, Academia Sinica, Taiwan

text: HPaSteC

text: HPaSteC transwell coculture with PANC-1

text: Homo sapiens

text: Human sample from Homo sapiens


HPaSteC direct coculture with PANC-1

text: Academia Sinica

text: live

text: Human

text: Wen-Hwa Lee, Academia Sinica, Taiwan

text: HPaSteC

text: HPaSteC direct coculture with PANC-1

text: Homo sapiens

text: Human sample from Homo sapiens


text: Universidade Federal de Sao Paulo

text: live

text: Pathogen.cl

text: Universidade Federal de Sao Paulo

characteristic: collected by

characteristic: collection date

text: This strain is part of a comparative study evaluating E. coli clones isolated from the gut of hospitalized patients with strains causing urinary tract infection in one single center. The Escherichia coli strain SMG016F1 was isolated from a rectal swab from an inpatient with urinary tract infection. This sequence refers to clone F1 from the patient SMG016. The other clones isolated from the rectal swab of the same inpatient are SMG016F4a, and SMG016F10. This strain was identified as clone of UTI causing strain. The strain fulfils the molecular criterium to be classified as ExPEC.

characteristic: description

text: Brazil: Sao Paulo

characteristic: geo loc name

text: Homo sapiens

characteristic: host

characteristic: host age

text: UTI

characteristic: host disease

text: female

characteristic: host sex

text: rectal swab

characteristic: isolation source

text: 22.36448060 S 46.94347391 W

characteristic: lat lon

text: Escherichia coli

text: ExPEC

characteristic: pathotype

characteristic: serotype

characteristic: strain

text: Escherichia coli strain SMG016F1, isolated from rectal swab of an inpatient with UTI


characteristic: External Id

text: Universidade Federal de Sao Paulo

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: SRA accession

text: Universidade Federal de Sao Paulo

text: This strain is part of a comparative study evaluating E. coli clones isolated from the gut of hospitalized patients with strains causing urinary tract infection in one single center. The Escherichia coli strain SMG016F4a was isolated from a rectal swab from an inpatient with urinary tract infection. This sequence refers to clone F4a from the patient SMG016. The other clones isolated from the rectal swab of the same inpatient are SMG016F1, and SMG016F10.

text: Brazil: Sao Paulo

text: Homo sapiens

text: UTI

text: female

text: rectal swab

text: 22.36448060 S 46.94347391 W

text: Escherichia coli

characteristic: organism

text: Escherichia coli strain SMG016F4a, isolated from rectal swab of an inpatient with UTI

characteristic: title


text: Universidade Federal de Sao Paulo

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Universidade Federal de Sao Paulo

characteristic: collected by

characteristic: collection date

text: This strain is part of a comparative study evaluating E. coli clones isolated from the gut of hospitalized patients with strains causing urinary tract infection in one single center. The Escherichia coli strain SMG016F10 was isolated from a rectal swab from an inpatient with urinary tract infection. This sequence refers to clone F10 from the patient SMG016. The other clones isolated from the rectal swab of the same inpatient are SMG016F1, and SMG016F4a.

characteristic: description

text: Brazil: Sao Paulo

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: UTI

text: female

text: rectal swab

text: 22.36448060 S 46.94347391 W

text: Escherichia coli

text: Escherichia coli strain SMG016F10, isolated from rectal swab of an inpatient with UTI


text: Universidade Federal de Sao Paulo

text: live

text: Pathogen.cl

text: Universidade Federal de Sao Paulo

text: This strain is part of a comparative study evaluating E. coli clones isolated from the gut of hospitalized patients with strains causing urinary tract infection in one single center. The Escherichia coli strain SMG015U was isolated from an urine sample from an inpatient with urinary tract infection. The strain fulfils the molecular criterium to be classified as UPEC.

text: Brazil: Sao Paulo

text: Homo sapiens

characteristic: host age

text: UTI

characteristic: host disease

text: female

characteristic: host sex

text: urine

characteristic: isolation source

text: 22.36448060 S 46.94347391 W

characteristic: lat lon

text: Escherichia coli

text: UPEC

characteristic: pathotype

characteristic: serotype

characteristic: strain

text: Escherichia coli strain SMG015U, isolated from urine of an inpatient with UTI


characteristic: External Id

text: Columbia University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

characteristic: SRA accession

text: 12 weeks

characteristic: age

text: Pro-B cells

characteristic: cell type

text: Cell sorting

text: Bone marrow was collected, red blood cells lysed and cells were stained with antibodies for cell sorting by flow cytometry. Sorted pro-B cells were resuspended in TRIzol for total RNA extraction and sequencing.

text: RNA-seq

characteristic: experiment

text: Dis3 COIN/+

characteristic: genotype

text: Mus musculus

characteristic: organism

characteristic: replicate

text: male

characteristic: sex

text: Bone marrow

characteristic: tissue

text: Dis3 COIN/+, replicate 1, RNA-seq

characteristic: title


text: Columbia University

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 12 weeks

text: Pro-B cells

text: Cell sorting

characteristic: collected by

text: Bone marrow were collected, red blood cells lysed and cells were stained with antibodies for cell sorting by flow cytometry. Sorted pro-B cells were resuspended in TRIzol for total RNA extraction and sequencing.

characteristic: description

text: RNA-seq

text: Dis3 COIN/COIN

text: Mus musculus

text: male

text: Bone marrow

text: Dis3 COIN/COIN, replicate 1, RNA-seq


characteristic: External Id

text: Columbia University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Model organism or animal

text: 12 weeks

text: Pro-B cells

text: Cell sorting

text: RNA-seq

text: Dis3 COIN/+

text: Mus musculus

text: male

characteristic: strain

text: Bone marrow

text: Dis3 COIN/+, replicate 2, RNA-seq


text: Columbia University

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

characteristic: SRA accession

text: 12 weeks

characteristic: age

text: Pro-B cells

characteristic: cell type

text: Cell sorting

text: RNA-seq

characteristic: experiment

text: Dis3 COIN/COIN

text: Mus musculus

text: male

text: Bone marrow

text: Dis3 COIN/COIN, replicate 2, RNA-seq


text: Columbia University

text: live

text: Model organism or animal

text: 12 weeks

text: Pro-B cells

text: Cell sorting

text: RNA-seq

text: Dis3 COIN/+

characteristic: genotype

text: Mus musculus

characteristic: organism

characteristic: replicate

text: male

characteristic: sex

text: Bone marrow

characteristic: tissue

text: Dis3 COIN/+, replicate 3, RNA-seq


text: Columbia University

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 12 weeks

text: Pro-B cells

text: Cell sorting

characteristic: collected by

text: RNA-seq

text: Dis3 COIN/COIN

text: Mus musculus

text: male

text: Bone marrow

text: Dis3 COIN/COIN, replicate 3, RNA-seq

characteristic: title


characteristic: External Id

text: Shanghai Academy of Agricultural Sciences

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Model organism or animal

text: Hyline laying hens

characteristic: breed

text: Gallus gallus

text: biological replicate 1

text: female

text: liver

text: Normal liver


characteristic: INSDC secondary accession

text: live

text: Model organism or animal

characteristic: SRA accession

characteristic: age

text: Hyline laying hens

text: Gallus gallus

text: biological replicate 2

text: female

text: liver

text: Normal liver


text: live

text: Model organism or animal

text: Hyline laying hens

text: Gallus gallus

characteristic: organism

text: biological replicate 3

text: female

text: liver

text: Normal liver


text: live

text: Model organism or animal

text: Hyline laying hens

text: Gallus gallus

text: biological replicate 1

characteristic: replicate

text: female

text: liver

text: fatty liver


text: live

text: Model organism or animal

text: Hyline laying hens

text: Gallus gallus

text: biological replicate 2

text: female

characteristic: sex

text: liver

text: fatty liver


text: live

text: Model organism or animal

text: Hyline laying hens

text: Gallus gallus

text: biological replicate 3

text: female

text: liver

characteristic: tissue

text: fatty liver


name: Metagenome-assembled genome of Candidatus Manganitrophus morganii SA1

text: California Institute of Technology

text: live

characteristic: INSDC status

text: MIMAG.miscellaneous

characteristic: collection date

text: Keywords: GSC:MIxS;MIMAG:5.0

characteristic: description

text: 1107 m

characteristic: elev

text: rock surface biome

text: black material

text: manganese oxide containing black material

characteristic: environmental sample

text: South Africa: Boetsap, Northern Cape

characteristic: geo loc name

characteristic: isolate

text: manganese oxidizing enrichment culture inoculated with sample from rock surface coated with black slime/moss near a pond by a road on an exposed outcrop of the Reivilo Formation

characteristic: isolation source

text: 27.964167 S 24.454183 E

characteristic: lat lon

text: microbial mat metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Candidatus Manganitrophus morganii

text: metagenomic assembly

characteristic: sample-type

text: MIMAG Metagenome-assembled Genome sample from Candidatus Manganitrophus morganii

type: derived-from


characteristic: External Id

text: Plant Cell Biochemistry, Graduate School of Agricultural Science, Tohoku University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: elevated CO2

characteristic: condition

text: Nipponbare

characteristic: cultivar

text: Oryza sativa Japonica Group

text: Rice

text: 13.5 h

characteristic: time

text: Leaf blade

characteristic: title


text: live

characteristic: INSDC status

text: Generic

text: ambient CO2

text: Nipponbare

text: Oryza sativa Japonica Group

characteristic: organism

text: Rice

text: 13.5 h

text: Leaf blade

characteristic: tissue


text: live

text: Generic

text: elevated CO2

text: Nipponbare

text: Oryza sativa Japonica Group

text: Rice

text: 7 hr

text: Leaf blade


text: live

text: Generic

text: ambient CO2

text: Nipponbare

text: Oryza sativa Japonica Group

text: Rice

text: 7 hr

text: Leaf blade


text: Shanghai Children’s Medical Center, Shanghai Jiao Tong University School of Medicine

text: live

text: Generic

text: Mus musculus

text: LV free wall myocardium_operated-sham

characteristic: strain

text: postnatal day 14

characteristic: test age

text: myocardium

text: postnatal day 7

characteristic: treatment age

text: operated-sham

characteristic: treatment method


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Mus musculus

text: LV free wall myocardium_volume overload(AVF)

text: postnatal day 14

text: myocardium

text: postnatal day 7

text: volume overload(AVF)


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

text: Mus musculus

text: LV free wall myocardium_operated-sham

text: postnatal day 21

text: myocardium

text: postnatal day 7

text: operated-sham


text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Mus musculus

text: postnatal day 21

text: myocardium

text: postnatal day 7

text: volume overload(AVF)


text: Schaefer Lab, Cell and Developmental Biology, Medical University Vienna, Center for Anatomy & Cell Biology

text: live

text: Generic

text: Separated by native PAGE prior to library cloning

characteristic: biochemical separation

characteristic: cell line

text: Cleaved with recombinant Angiogenin and subjected to DDX3X unwinding assay

characteristic: enzymatic treatment

text: tRNA

characteristic: molecule subtype

text: Homo sapiens

text: DDX3X-displaced tracer tRNA replicate 2


text: live

characteristic: INSDC status

text: Generic

text: Cleaved with recombinant Angiogenin and heat denatured

text: tRNA

text: Homo sapiens

characteristic: organism

text: Heat denatured tracer tRNA replicate 2

characteristic: title


text: live

text: Generic

text: tRNA

text: Homo sapiens

text: DDX3X-displaced tracer tRNA replicate 1


text: live

text: Generic

text: tRNA

text: Homo sapiens

text: Heat denatured tracer tRNA replicate 1


text: live

text: Generic

text: Cleaved with recombinant Angiogenin

text: tRNA

text: Homo sapiens

text: tracer tRNA replicate 2


text: live

text: Generic

text: Cleaved with recombinant Angiogenin

text: tRNA

text: Homo sapiens

text: tracer tRNA replicate 1


text: Dana Faber Cancer Institute

text: live

text: Generic

characteristic: chip antibody

text: Diagenode

characteristic: chip antibody vendor

text: Homo sapiens

text: CRPC PDX

text: CRPC pdx

characteristic: tissue

text: SPT

characteristic: treatment


characteristic: External Id

text: Dana Faber Cancer Institute

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Diagenode

text: Homo sapiens

text: CRPC PDX

text: CRPC pdx

text: control


text: Dana Faber Cancer Institute

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

text: Santa Cruz Biotechnology

text: Homo sapiens

text: CRPC PDX

text: CRPC pdx

text: control


text: Dana Faber Cancer Institute

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Abcam

text: Homo sapiens

text: CRPC PDX

text: CRPC pdx

text: control


text: Dana Faber Cancer Institute

text: live

text: Generic

text: AR

text: Santa Cruz Biotechnology

text: Homo sapiens

text: CRPC PDX

text: CRPC pdx

text: SPT


text: Dana Faber Cancer Institute

text: live

text: Generic

text: AR

text: Santa Cruz Biotechnology

text: Homo sapiens

text: CRPC PDX

text: CRPC pdx

text: control


text: Dana Faber Cancer Institute

text: live

text: Generic

text: Homo sapiens

text: CRPC PDX

text: CRPC pdx

text: SPT


text: Dana Faber Cancer Institute

text: live

text: Generic

text: Homo sapiens

text: CRPC PDX

text: CRPC pdx

text: control


text: Center for Quantitative Sciences, Department of Biostatisticss, Vanderbilt University Medical Center

text: live

text: Generic

text: colon cancer cell lines

characteristic: cell type

text: WT KRAS

characteristic: genotype

text: Homo sapiens

text: control

characteristic: sample type

text: DKs-8 colon cancer cell lines

text: Colon


text: live

characteristic: INSDC status

text: Generic

text: colon cancer cell lines

text: WT KRAS

text: Homo sapiens

characteristic: organism

text: VAP-A knockdown (KD1)

text: DKs-8 colon cancer cell lines

text: Colon


text: live

text: Generic

text: colon cancer cell lines

text: WT KRAS

text: Homo sapiens

text: VAP-A knockdown (KD2)

text: DKs-8 colon cancer cell lines

text: Colon

characteristic: title


text: live

text: Generic

text: colon cancer cell lines

text: WT KRAS

text: Homo sapiens

text: VAP-A knockdown (KD2)

text: DKs-8 colon cancer cell lines

text: Colon cancer derived cell lines


text: Columbia University

text: live

text: Model organism or animal

text: 54 d

characteristic: age

text: B cells

text: Bone marrow was extracted from young mice and red blood cells were removed with ACK buffer. Bone marrow cells were stained for FACS-sorting using a combination of anti-B220, anti-CD43, anti-CD25, anti-IgM antibodies. Pro-B cells were sorted and cells were pelleted for the transposition assays as described in the Material and Methods.

characteristic: description

text: ATAC-seq

characteristic: experiment

text: Dis3 COIN/+

text: Mus musculus

characteristic: replicate

text: female

characteristic: sex

characteristic: strain

text: pro-B cells

text: Dis3 COIN/+, replicate 1, ATAC-seq


characteristic: External Id

text: Columbia University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Model organism or animal

text: 54 d

text: B cells

text: ATAC-seq

text: Dis3 COIN/COIN

text: Mus musculus

text: female

text: pro-B cells

characteristic: tissue

text: Dis3 COIN/COIN, replicate 1, ATAC-seq


text: Columbia University

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: 54 d

text: B cells

characteristic: cell type

text: ATAC-seq

text: Dis3 COIN/+

text: Mus musculus

text: male

text: pro-B cells

text: Dis3 COIN/+, replicate 2, ATAC-seq


text: Columbia University

text: live

characteristic: INSDC status

text: Model organism or animal

text: 54 d

text: B cells

text: ATAC-seq

text: Dis3 COIN/COIN

characteristic: genotype

text: Mus musculus

characteristic: organism

text: male

text: pro-B cells

text: Dis3 COIN/COIN, replicate 2, ATAC-seq

characteristic: title


text: Southwest Forestry University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: China: Yunnan

characteristic: geo loc name

text: Actinidiaceae, Actinia

characteristic: host

text: This is a fungus produced by fermentation

characteristic: isolate

text: 'Hongyang' kiwifruit

characteristic: isolation source

text: Cladosporium herbarum

text: metagenomic assembly

characteristic: sample type

text: microbial

text: Microbe sample from Cladosporium herbarum


characteristic: External Id

text: Institute of Zoology, Chinese Academy of Sciences

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Model organism or animal

text: adult

characteristic: age

text: China: Chongqing Province

characteristic: geo-loc-name

text: Emberiza elegans

text: male

characteristic: sex

text: muscle

text: Model organism or animal sample from Emberiza elegans


Pseudomonas sp. LA21

text: Universiti Malaya

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: 30 cm below soil surface

characteristic: depth

text: Malaysia: Perak

text: soil samples from oil palm plantation

characteristic: name

text: Pseudomonas sp. LA21

text: single pure culture

characteristic: strain

text: Pseudomonas sp. isolated from soil sample


text: Southwest Forestry University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: China: Yunnan

characteristic: geo loc name

text: kiwifruit

characteristic: host

text: This is a fungus produced by 'Hongyang' kiwifruit (Actinidiaceae, Actinia)

characteristic: isolate

text: 'Hongyang' kiwifruit

characteristic: isolation source

text: unclassified Capnodiales

characteristic: organism

text: metagenomic assembly

text: microbial

text: Microbe sample from unclassified Capnodiales

characteristic: title


characteristic: External Id

text: Southwest Forestry University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: China: Yunnan

text: kiwifruit

text: 'Hongyang' kiwifruit

text: Didymella exigua

text: metagenomic assembly

characteristic: sample type

text: microbial

text: Microbe sample from Didymella exigua


text: Southwest Forestry University

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: China: Yunnan

text: kiwifruit

text: 'Hongyang' kiwifruit

text: unclassified Didymella

text: metagenomic assembly

text: microbial

text: Microbe sample from unclassified Didymella


text: Southwest Forestry University

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: China: Yunnan

text: kiwifruit

text: 'Hongyang' kiwifruit

text: Neoascochyta paspali

text: metagenomic assembly

text: microbial

characteristic: strain

text: Microbe sample from Neoascochyta paspali


text: Southwest Forestry University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: China: Yunnan

characteristic: geo loc name

text: kiwifruit

text: 'Hongyang' kiwifruit

text: unclassified Pleosporales

text: metagenomic assembly

text: microbial

text: Microbe sample from unclassified Pleosporales


text: Southwest Forestry University

text: live

text: Microbe, viral or environmental

text: China: Yunnan

text: kiwifruit

characteristic: host

characteristic: isolate

text: 'Hongyang' kiwifruit

text: Aspergillus penicillioides

text: metagenomic assembly

text: microbial

text: Microbe sample from Aspergillus penicillioides


text: Southwest Forestry University

text: live

text: Microbe, viral or environmental

text: China: Yunnan

text: kiwifruit

text: 'Hongyang' kiwifruit

characteristic: isolation source

text: Geotrichum candidum

characteristic: organism

text: metagenomic assembly

text: microbial

text: Microbe sample from Geotrichum candidum


characteristic: External Id

text: Southwest Forestry University

text: live

text: Microbe, viral or environmental

text: China: Yunnan

text: kiwifruit

text: 'Hongyang' kiwifruit

text: Citeromyces matritensis

text: metagenomic assembly

text: microbial

text: Microbe sample from Citeromyces matritensis

characteristic: title


text: Southwest Forestry University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: China:Yunnan

text: kiwifruit

text: 'Hongyang' kiwifruit

text: Apiospora thailandica

text: metagenomic assembly

text: microbial

text: Microbe sample from Apiospora thailandica


text: Southwest Forestry University

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: China:Yunnan

text: kiwifruit

text: 'Hongyang' kiwifruit

text: Robillarda sessilis

text: metagenomic assembly

characteristic: sample type

text: microbial

text: Microbe sample from Robillarda sessilis


text: Southwest Forestry University

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: China:Yunnan

text: kiwifruit

text: 'Hongyang' kiwifruit

text: unclassified Basidiobolus

text: metagenomic assembly

text: microbial

text: Microbe sample from unclassified Basidiobolus


text: Southwest Forestry University

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: China:Yunnan

text: kiwifruit

text: 'Hongyang' kiwifruit

text: Hygrophorus persicolor

text: metagenomic assembly

text: microbial

text: Microbe sample from Hygrophorus persicolor


text: Southwest Forestry University

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: China:Yunnan

text: kiwifruit

text: 'Hongyang' kiwifruit

text: Coprinopsis calospora

text: metagenomic assembly

text: microbial

characteristic: strain

text: Microbe sample from Coprinopsis calospora


text: Southwest Forestry University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: China:Yunnan

characteristic: geo loc name

text: kiwifruit

text: 'Hongyang' kiwifruit

text: Coprinopsis urticicola

text: metagenomic assembly

text: microbial

text: Microbe sample from Coprinopsis urticicola


Pseudomonas nitroreducens strain FY43

text: Universiti Malaya

text: live

text: Microbe, viral or environmental

text: 30 cm below soil surface

characteristic: depth

text: Malaysia: Perak

text: soil sample from oil palm plantation

characteristic: name

text: Pseudomonas nitroreducens

text: Single pure culture

text: Microbe sample from Pseudomonas nitroreducens


Pseudomonas nitroreducens strain FY47

text: Universiti Malaya

text: live

text: Microbe, viral or environmental

text: 30 cm below soil surface

text: Malaysia: Perak

text: soil sample from oil palm plantation

characteristic: isolation source

text: Pseudomonas nitroreducens

characteristic: organism

text: Single pure culture


characteristic: External Id

text: City University of Hong Kong

text: live

text: Pathogen.cl

text: Zhang Rong

characteristic: collected by

text: China: zhejiang

text: Homo sapiens

characteristic: host

text: surgical site infection

characteristic: host disease

text: sputum

text: 30.16 N 120.12 E

characteristic: lat lon

text: Klebsiella pneumoniae

text: Pathogen: clinical or host-associated sample from Klebsiella pneumoniae

characteristic: title


text: City University of Hong Kong

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.cl

text: Zhang Rong

text: China: zhejiang

text: Homo sapiens

text: surgical site infection

text: secretion

text: 30.16 N 120.12 E

text: Klebsiella pneumoniae


text: Beijing Forestry University

characteristic: INSDC secondary accession

text: live

text: Plant

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: wild

characteristic: cultivar

text: China:Inner Mongolia Autonomous Region, Ningxia Hui Nationality Autonomous Region, Shaanxi Province, Gansu Province, and Hebei Province

text: Caryopteris mongholica

text: leaf

characteristic: tissue

text: Plant sample from Caryopteris mongholica


text: Lanzhou University

text: live

text: Plant

characteristic: age

text: not collected

characteristic: ecotype

text: China:Eimei mountain

characteristic: geo loc name

characteristic: isolate

text: Bretschneidera sinensis

characteristic: organism

text: leaves


PLVX/CTRL

characteristic: External Id

text: Wuhan University

text: live

text: Human

text: adults

text: Sciencell research laboratories

characteristic: biomaterial provider

text: hMSCs

characteristic: cell line

text: control

text: healthy

text: Homo sapiens

text: not collected

characteristic: sex

text: bone marrow

text: PLVX/CTRL from Homo sapiens


text: Wuhan University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Human

text: adults

text: Sciencell research laboratories

text: hMSCs

text: IRX5 overexpression

text: healthy

text: Homo sapiens

text: not collected

text: bone marrow

text: PLVX/IRX5 from Homo sapiens

characteristic: title


text: University of Maryland, College Park

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Plant

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Fig.1c, Extended Data Fig.3b

characteristic: description

text: USA: Maryland

text: Oryza sativa

text: cells


text: University of Maryland, College Park

text: live

text: Plant

characteristic: SRA accession

characteristic: cultivar

text: USA: Maryland

text: Solanum lycopersicum

text: cells

characteristic: tissue


text: University of Maryland, College Park

text: live

text: Plant

text: Fig.2c, Extended Data Fig.5b

text: USA: Maryland

characteristic: geo loc name

text: Oryza sativa

characteristic: organism

text: cells


characteristic: External Id

text: University of Maryland, College Park

text: live

text: Plant

text: two weeks

characteristic: age

text: USA: Maryland

text: Arabidopsis

text: leaves


text: University of Maryland, College Park

text: live

text: Plant

text: two weeks

text: Extended Data Fig.7

text: USA: Maryland

text: Arabidopsis

text: leaves


text: University of Maryland, College Park

text: live

text: Plant

text: two weeks

text: Supplementary Figure 1a

text: USA: Maryland

text: Arabidopsis

text: leaves


text: University of Maryland, College Park

text: live

text: Plant

text: two weeks

text: USA: Maryland

text: Arabidopsis

text: leaves

text: BE-AtALS


text: University of Maryland, College Park

text: live

text: Plant

text: two weeks

text: Extended Data Fig.6

text: USA: Maryland

text: Arabidopsis

text: leaves


text: University of Maryland, College Park

text: live

text: Plant

text: two weeks

text: Supplementary Figure 2b

text: USA: Maryland

text: Arabidopsis

text: leaves


text: University of Maryland, College Park

text: live

text: Plant

text: two weeks

text: Populus alba x tremula clone 717-1B4-1

text: Fig.4,Supplementary Figure 3

text: USA: Maryland

text: Populus

text: leaves


text: University of Maryland, College Park

text: live

text: Plant

text: two weeks

text: Populus alba x tremula clone 717-1B4-2

text: Fig.4,Supplementary Figure 3

text: USA: Maryland

text: Populus

text: leaves


text: University of Maryland, College Park

text: live

text: Plant

text: two weeks

text: Fig.5,Supplementary Figure 4

text: USA: Maryland

text: Oryza sativa

text: leaves


text: Yangzhou University

text: live

text: Plant

text: Liyang Baiqin

text: China:Yangzhou

text: Oenanthe javanica

text: Leaf

text: Plant sample from Oenanthe javanica

text: Shading treatment biological replicate 1

characteristic: treatment


text: Yangzhou University

characteristic: INSDC center name

text: live

text: Plant

text: Liyang Baiqin

text: China:Yangzhou

text: Oenanthe javanica

text: Leaf

text: Plant sample from Oenanthe javanica

text: Shading treatment biological replicate 2


text: Yangzhou University

characteristic: INSDC first public

text: live

text: Plant

text: Liyang Baiqin

text: China:Yangzhou

text: Oenanthe javanica

text: Leaf

text: Plant sample from Oenanthe javanica

text: Shading treatment biological replicate 3


text: Yangzhou University

characteristic: INSDC last update

text: live

text: Plant

text: Liyang Baiqin

text: China:Yangzhou

text: Oenanthe javanica

text: Leaf

text: Plant sample from Oenanthe javanica

text: Normal biological replicate 1


text: Yangzhou University

text: live

text: Plant

text: Liyang Baiqin

text: China:Yangzhou

text: Oenanthe javanica

text: Leaf

text: Plant sample from Oenanthe javanica

characteristic: title

text: Normal biological replicate 2


text: Yangzhou University

characteristic: INSDC secondary accession

text: live

text: Plant

text: Liyang Baiqin

text: China:Yangzhou

text: Oenanthe javanica

text: Leaf

text: Plant sample from Oenanthe javanica

text: Normal biological replicate 3


text: Yangzhou University

text: live

characteristic: INSDC status

text: Plant

text: Liyang Baiqin

text: China:Yangzhou

text: Oenanthe javanica

text: Petiole

text: Plant sample from Oenanthe javanica


text: Yangzhou University

text: live

text: Plant

characteristic: NCBI submission model

text: Liyang Baiqin

text: China:Yangzhou

text: Oenanthe javanica

text: Petiole

text: Plant sample from Oenanthe javanica


text: Yangzhou University

text: live

text: Plant

characteristic: NCBI submission package

text: Liyang Baiqin

text: China:Yangzhou

text: Oenanthe javanica

text: Petiole

text: Plant sample from Oenanthe javanica


text: Yangzhou University

text: live

text: Plant

text: Liyang Baiqin

characteristic: description

text: China:Yangzhou

text: Oenanthe javanica

text: Petiole

text: Plant sample from Oenanthe javanica

text: Normal biological replicate 1


text: Yangzhou University

text: live

text: Plant

characteristic: SRA accession

text: Liyang Baiqin

text: China:Yangzhou

text: Oenanthe javanica

text: Petiole

text: Plant sample from Oenanthe javanica

text: Normal biological replicate 2


text: Yangzhou University

text: live

text: Plant

text: Liyang Baiqin

characteristic: cultivar

text: China:Yangzhou

text: Oenanthe javanica

text: Petiole

text: Plant sample from Oenanthe javanica

text: Normal biological replicate 3


text: Zhejiang University

text: live

text: Metagenome or environmental

characteristic: collection date

text: Homo sapiens

characteristic: host

text: intestine

characteristic: isolation source

text: human gut metagenome

text: biological replicate 1

characteristic: replicate

text: Metagenome or environmental sample from human gut metagenome


characteristic: External Id

text: Zhejiang University

text: live

text: Metagenome or environmental

text: Homo sapiens

text: intestine

text: human gut metagenome

characteristic: organism

text: biological replicate 2


text: Zhejiang University

characteristic: INSDC center name

text: live

text: Metagenome or environmental

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 3


text: Zhejiang University

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 4


text: Zhejiang University

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 5


text: Zhejiang University

text: live

text: Metagenome or environmental

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 6

characteristic: title


text: Zhejiang University

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 7


text: Zhejiang University

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 8


text: Zhejiang University

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 9


text: Zhejiang University

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 10


text: Zhejiang University

text: live

text: Metagenome or environmental

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 11


text: Zhejiang University

text: live

text: Metagenome or environmental

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 12


text: Zhejiang University

text: live

text: Metagenome or environmental

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 13


text: Zhejiang University

text: live

text: Metagenome or environmental

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 14


text: Zhejiang University

text: live

text: Metagenome or environmental

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 15


text: Zhejiang University

text: live

text: Metagenome or environmental

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 16


text: Zhejiang University

text: live

text: Metagenome or environmental

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 17


text: Zhejiang University

text: live

text: Metagenome or environmental

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 18


text: Zhejiang University

text: live

text: Metagenome or environmental

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 19


text: Zhejiang University

text: live

text: Metagenome or environmental

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 20


text: Zhejiang University

text: live

text: Metagenome or environmental

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 21


text: Zhejiang University

text: live

text: Metagenome or environmental

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 22


text: Zhejiang University

text: live

text: Metagenome or environmental

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 23


text: Zhejiang University

text: live

text: Metagenome or environmental

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 24


text: Zhejiang University

text: live

text: Metagenome or environmental

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 25


text: Zhejiang University

text: live

text: Metagenome or environmental

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 26


text: Zhejiang University

text: live

text: Metagenome or environmental

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 27


text: Zhejiang University

text: live

text: Metagenome or environmental

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 28


text: Zhejiang University

text: live

text: Metagenome or environmental

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 29


text: Zhejiang University

text: live

text: Metagenome or environmental

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 30


text: Zhejiang University

text: live

text: Metagenome or environmental

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 31


text: Zhejiang University

text: live

text: Metagenome or environmental

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 32


text: Zhejiang University

text: live

text: Metagenome or environmental

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 33


text: Zhejiang University

text: live

text: Metagenome or environmental

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 34


text: Zhejiang University

text: live

text: Metagenome or environmental

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 35


text: Zhejiang University

text: live

text: Metagenome or environmental

text: Homo sapiens

text: intestine

text: human gut metagenome

text: biological replicate 36


text: Epithelial Carcinogenesis Group, Molecular Oncology Programme, CNIO

text: live

text: Generic

text: 2 months

characteristic: age

characteristic: genotype

text: Mus musculus

text: pancreas

characteristic: strain

text: Pancreas

characteristic: tissue

text: AL4939 [OSKM 3 (i4F 3)]

text: Doxycycline

characteristic: treatment


text: live

text: Generic

characteristic: SRA accession

text: 2 months

text: Mus musculus

text: pancreas

text: Pancreas

text: AL4938 [OSKM 2 (i4F 2)]

text: Doxycycline


text: live

text: Generic

text: 2 months

text: Mus musculus

text: pancreas

text: Pancreas

text: AL4937 [OSKM 1 (i4F 1)]

text: Doxycycline


text: live

text: Generic

text: 2 months

text: Wild type

text: Mus musculus

text: pancreas

text: Pancreas

text: AM4990 [CERULEIN 2]

text: cerulein


text: live

text: Generic

text: 2 months

text: Wild type

text: Mus musculus

text: pancreas

text: Pancreas

text: AM4989 [CERULEIN 1]

text: cerulein


text: live

text: Generic

text: 2 months

text: Wild type

text: Mus musculus

text: pancreas

text: Pancreas

text: AM4988 [WT 2]

text: Doxycycline


text: live

text: Generic

text: 2 months

text: Wild type

text: Mus musculus

text: pancreas

text: Pancreas

text: AL4936 [WT 1]

text: Doxycycline


text: Josep Carreras Research Institution

text: live

text: Model organism or animal

text: 6 weks

text: primary cell line

characteristic: cell line

text: endothelial cell

characteristic: cell type

text: adult

characteristic: dev stage

text: Mus musculus

characteristic: replicate

text: male

characteristic: sex

text: lung


characteristic: External Id

text: Josep Carreras Research Institution

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Model organism or animal

text: 6 weks

text: primary cell line

text: endothelial cell

text: adult

text: Mus musculus

characteristic: organism

text: male

text: lung

text: et


text: Josep Carreras Research Institution

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 6 weks

text: primary cell line

text: endothelial cell

text: adult

text: Mus musculus

text: female

text: lung

characteristic: title


text: Josep Carreras Research Institution

text: live

text: Model organism or animal

text: 6 weks

characteristic: age

text: primary cell line

text: endothelial cell

text: adult

characteristic: genotype

text: Mus musculus

text: female

characteristic: strain

text: lung

characteristic: tissue

text: et

characteristic: treatment


text: Diabetes Stem Cells Group, Department of Clinical Science, University if Bergen

text: live

text: Generic

characteristic: SRA accession

characteristic: condition

characteristic: iPSc cell line

text: Homo sapiens

text: hiPSC-derived beta like cells at Stage7


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: Alginate Group

text: Homo sapiens

text: hiPSC-derived beta like cells at Stage7


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Alginate Group_2D

text: Homo sapiens

text: hiPSC-derived beta like cells at Stage7


text: Southwest University

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

characteristic: collection date

text: China:chongqing

characteristic: geo loc name

text: Plant rhizosphere 01AQ

characteristic: host

text: 31.7095 N 108.81 E

characteristic: lat lon

text: rhizosphere metagenome

characteristic: organism

text: Metagenome or environmental sample from rhizosphere metagenome


text: Southwest University

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: China:chongqing

text: Plant rhizosphere 01AS

text: 31.7095 N 108.81 E

text: rhizosphere metagenome

characteristic: title


text: Southwest University

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: China:chongqing

text: Plant rhizosphere 01AZ

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 01BQ

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 01BS

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 01BZ

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 01CQ

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 01CS

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 01CZ

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 01DQ

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 01DS

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 01DZ

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 02AQ

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 02AS

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 02AZ

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 02BQ

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 02BS

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 02BZ

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 02CQ

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 02CS

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 02CZ

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 02DQ

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 02DS

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 02DZ

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 03AQ

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 03AS

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 03AZ

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 03BQ

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 03BS

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 03BZ

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 03CQ

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 03CS

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 03CZ

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 03DQ

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 03DS

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 03DZ

text: 31.7095 N 108.81 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 01AQ

text: 31.724 N 108.7574 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 01AS

text: 31.724 N 108.7574 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 01AZ

text: 31.724 N 108.7574 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 01BQ

text: 31.724 N 108.7574 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 01BS

text: 31.724 N 108.7574 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 01BZ

text: 31.724 N 108.7574 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 01CQ

text: 31.724 N 108.7574 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 01CS

text: 31.724 N 108.7574 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 01CZ

text: 31.724 N 108.7574 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 01DQ

text: 31.724 N 108.7574 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 01DS

text: 31.724 N 108.7574 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 01DZ

text: 31.724 N 108.7574 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 02AQ

text: 31.724 N 108.7574 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 02AS

text: 31.724 N 108.7574 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 02AZ

text: 31.724 N 108.7574 E

text: rhizosphere metagenome


text: Southwest University

text: live

text: Metagenome or environmental

text: China:chongqing

text: Plant rhizosphere 02BQ

text: 31.724 N 108.7574 E

text: rhizosphere metagenome