text: University of Cape Town and National Health Laboratory Service

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: 2 Military Hospital wc MAA

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BH04/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BH04/2022

text: Severe acute respiratory syndrome coronavirus 2

text: Surveillance


status: PUBLIC

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 2 Military Hospital wc MAA

tag: attribute

characteristic: collected by

characteristic: collection date

text: South Africa:Western Cape

characteristic: geo loc name

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BH05/2022

text: Homo sapiens

characteristic: host

characteristic: host age

characteristic: host disease

text: male

characteristic: host sex

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BH05/2022

characteristic: isolate

characteristic: organism

text: Surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2

characteristic: title


text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: 2 Military Hospital wc MAA

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BH06/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BH06/2022

text: Surveillance


characteristic: External Id

text: live

text: SARS-CoV-2: clinical or host-associated

text: Study: Rapid Diag POC Covid

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BH07/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BH07/2022

text: Surveillance


characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: Victoria Hospital wc VHW

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BH08/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BH08/2022

text: Surveillance


characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sedgefield Clinic wc SGE

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BH09/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BH09/2022

text: Surveillance


characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BH10/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BH10/2022

text: Surveillance


text: University of Cape Town and National Health Laboratory Service

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: Clinic-in-Asla

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BH12/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BH12/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: Study: Rapid Diag POC Covid

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BH13/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BH13/2022

text: Severe acute respiratory syndrome coronavirus 2

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: 2 Military Hospital wc MAA

characteristic: collected by

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BH14/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BH14/2022

text: Surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: 2 Military Hospital wc MAA

characteristic: collection date

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BH15/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BH15/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: 2 Military Hospital wc MAA

text: South Africa:Western Cape

characteristic: geo loc name

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BH16/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BH16/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: 2 Military Hospital wc MAA

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BH17/2022

text: Homo sapiens

characteristic: host

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BH17/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Hillside Clinic wc HIC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BH19/2022

text: Homo sapiens

characteristic: host age

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BH19/2022

text: Surveillance


text: University of Cape Town and National Health Laboratory Service

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BH21/2022

text: Homo sapiens

characteristic: host disease

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BH21/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Heideveld Emergency Centre

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BH22/2022

text: Homo sapiens

text: male

characteristic: host sex

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BH22/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: 2 Military Hospital wc MAA

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BH23/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BH23/2022

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Great Brak River Clinic wc GBC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BH24/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BH24/2022

characteristic: organism

text: Surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: Mowbray Maternity Hospital wc MMH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BH25/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BH25/2022

text: Surveillance

characteristic: title


text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BH26/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BH26/2022

text: Afri-Co-Rad Trial


characteristic: External Id

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BH28/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BH28/2022

text: Potential Reinfection


text: University of Cape Town and National Health Laboratory Service

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: Conville CDC wc CVC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-C051/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-C051/2021

text: Mary-Ann Delta Case-Control Study


characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

text: Pacaltsdorp Clinic wc PAC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-C264/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-C264/2021

text: Mary-Ann Delta Case-Control Study


characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: 2 Military Hospital wc MAA

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-C271/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-C271/2021

text: Mary-Ann Delta Case-Control Study


text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: D'Almeida Clinic wc DAL

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-C339/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-C339/2021

text: Severe acute respiratory syndrome coronavirus 2

text: Mary-Ann Delta Case-Control Study


text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-C453/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-C453/2021

text: Mary-Ann Delta Case-Control Study

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: Conville CDC wc CVC

characteristic: collected by

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-C513/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-C513/2021

text: Mary-Ann Delta Case-Control Study


text: live

text: SARS-CoV-2: clinical or host-associated

text: George Hospital wc GRH

characteristic: collection date

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-C549/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-C549/2021

text: Mary-Ann Delta Case-Control Study


text: University of Cape Town and National Health Laboratory Service

text: live

text: SARS-CoV-2: clinical or host-associated

text: Knysna Hospital wc KNY

text: South Africa:Western Cape

characteristic: geo loc name

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-C960/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-C960/2021

text: Mary-Ann Delta Case-Control Study


text: live

text: SARS-CoV-2: clinical or host-associated

text: Mowbray Maternity Hospital wc MMH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-D150/2021

text: Homo sapiens

characteristic: host

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-D150/2021

text: Mary-Ann Delta Case-Control Study


text: live

text: SARS-CoV-2: clinical or host-associated

text: D'Almeida Clinic wc DAL

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-D160/2021

text: Homo sapiens

characteristic: host age

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-D160/2021

text: Mary-Ann Delta Case-Control Study


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-Z921/2022

text: Homo sapiens

characteristic: host disease

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-Z921/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-Z923/2022

text: Homo sapiens

text: female

characteristic: host sex

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-Z923/2022

text: Severe acute respiratory syndrome coronavirus 2

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-Z924/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-Z924/2022

characteristic: isolate

text: Surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-Z925/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-Z925/2022

characteristic: organism

text: Surveillance


text: University of Cape Town and National Health Laboratory Service

text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-Z926/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-Z926/2022

text: Surveillance

characteristic: title


text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-Z927/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-Z927/2022

text: Surveillance


characteristic: External Id

text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-Z928/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-Z928/2022

text: Surveillance/J&J Vaccine Breakthrough


characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-Z929/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-Z929/2022

text: Surveillance


characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-Z930/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-Z930/2022

text: Surveillance/J&J Vaccine Breakthrough


characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-Z931/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-Z931/2022

text: Severe acute respiratory syndrome coronavirus 2

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-Z932/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-Z932/2022

text: Surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: PulseNet Next Generation Subtyping Methods Unit

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: SRA accession

text: OR

text: ground turkey

characteristic: isolation source

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Escherichia coli


text: live

text: Pathogen.env

text: OR

characteristic: collected by

characteristic: collection date

text: Pork Chops

text: Escherichia coli

text: Escherichia coli


text: National University of Ireland Galway

text: live

text: Model organism or animal

text: centuries

characteristic: age

text: inbreed

characteristic: breed

text: Miguel Salinas-Saavedra

text: wild-type

characteristic: cultivar

text: 0 days post amputation

characteristic: dev stage

text: Lab

characteristic: ecotype

characteristic: isolate

text: Hydractinia symbiolongicarpus

characteristic: replicate

text: organism

characteristic: sample type

text: male

characteristic: sex

text: hypostome

characteristic: tissue

text: Model organism or animal sample from Hydractinia symbiolongicarpus


characteristic: External Id

text: National University of Ireland Galway

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

text: centuries

text: inbreed

text: Miguel Salinas-Saavedra

text: wild-type

text: 0 days post amputation

text: Lab

text: Hydractinia symbiolongicarpus

characteristic: organism

text: male

text: hypostome

characteristic: title


text: National University of Ireland Galway

text: live

text: Model organism or animal

characteristic: SRA accession

text: centuries

characteristic: age

text: inbreed

characteristic: breed

text: Miguel Salinas-Saavedra

characteristic: collected by

text: wild-type

characteristic: cultivar

text: 1 days post amputation

characteristic: dev stage

text: Lab

text: Hydractinia symbiolongicarpus

text: male

characteristic: strain

text: hypostome


characteristic: External Id

text: National University of Ireland Galway

text: live

text: Model organism or animal

text: centuries

text: inbreed

text: Miguel Salinas-Saavedra

text: wild-type

text: 3 days post amputation

text: Lab

characteristic: ecotype

characteristic: isolate

text: Hydractinia symbiolongicarpus

characteristic: replicate

text: male

characteristic: sex

text: hypostome

characteristic: tissue


text: National University of Ireland Galway

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

text: centuries

text: inbreed

text: Miguel Salinas-Saavedra

text: wild-type

text: 6 days post amputation

text: Lab

text: Hydractinia symbiolongicarpus

text: male

text: hypostome


text: Mississippi State University

text: live

text: Plant

characteristic: NCBI submission package

characteristic: SRA accession

text: Pima 379

text: 4-5 leaf stage

text: USA: Mississippi State University Dorman Greenhouse

characteristic: geo loc name

text: Gossypium barbadense

characteristic: organism

text: biological replicate 1

text: Leaf

text: Plant sample from Gossypium barbadense

characteristic: title

text: 12hrs after 2,4D

characteristic: treatment


characteristic: External Id

text: Mississippi State University

text: live

text: Plant

text: Pima 379

characteristic: cultivar

text: 4-5 leaf stage

characteristic: dev stage

text: Gossypium barbadense

text: biological replicate 2

text: Leaf

text: Plant sample from Gossypium barbadense

text: 12hrs after 2,4D


text: Mississippi State University

text: live

text: Plant

text: Pima 379

text: 4-5 leaf stage

text: Gossypium barbadense

text: biological replicate 3

characteristic: replicate

text: Leaf

text: Plant sample from Gossypium barbadense

text: 12hrs after 2,4D


text: Mississippi State University

text: live

text: Plant

text: Pima 379

text: 4-5 leaf stage

text: Gossypium barbadense

text: biological replicate 4

text: Leaf

characteristic: tissue

text: Plant sample from Gossypium barbadense

text: 12hrs after 2,4D


text: Mississippi State University

characteristic: INSDC center name

text: live

text: Plant

text: Pima 379

text: 4-5 leaf stage

text: Gossypium barbadense

text: biological replicate 1

text: Leaf

text: Plant sample from Gossypium barbadense

text: Control


text: Mississippi State University

characteristic: INSDC first public

text: live

text: Plant

text: Pima 379

text: 4-5 leaf stage

text: Gossypium barbadense

text: biological replicate 2

text: Leaf

text: Plant sample from Gossypium barbadense

text: Control


text: Mississippi State University

characteristic: INSDC last update

text: live

text: Plant

text: Pima 379

text: 4-5 leaf stage

text: Gossypium barbadense

text: biological replicate 3

text: Leaf

text: Plant sample from Gossypium barbadense

text: Control


text: Mississippi State University

characteristic: INSDC secondary accession

text: live

text: Plant

text: Pima 379

text: 4-5 leaf stage

text: Gossypium barbadense

text: biological replicate 4

text: Leaf

text: Plant sample from Gossypium barbadense

text: Control


text: Mississippi State University

text: live

characteristic: INSDC status

text: Plant

text: 4-5 leaf stage

text: Gossypium hirsutum

text: biological replicate 1

text: Leaf

text: Plant sample from Gossypium hirsutum

text: 12hrs after 2,4D


text: Mississippi State University

text: live

text: Plant

characteristic: NCBI submission model

text: 4-5 leaf stage

text: Gossypium hirsutum

text: biological replicate 2

text: Leaf

text: Plant sample from Gossypium hirsutum

text: 12hrs after 2,4D


text: Mississippi State University

text: live

text: Plant

characteristic: NCBI submission package

text: 4-5 leaf stage

text: Gossypium hirsutum

text: biological replicate 3

text: Leaf

text: Plant sample from Gossypium hirsutum

text: 12hrs after 2,4D


text: Mississippi State University

text: live

text: Plant

characteristic: SRA accession

text: 4-5 leaf stage

text: Gossypium hirsutum

text: biological replicate 4

text: Leaf

text: Plant sample from Gossypium hirsutum

text: 12hrs after 2,4D


text: Mississippi State University

text: live

text: Plant

text: 4-5 leaf stage

characteristic: geo loc name

text: Gossypium hirsutum

text: biological replicate 1

text: Leaf

text: Plant sample from Gossypium hirsutum

text: Control


text: Mississippi State University

text: live

text: Plant

text: 4-5 leaf stage

text: Gossypium hirsutum

characteristic: organism

text: biological replicate 2

text: Leaf

text: Plant sample from Gossypium hirsutum

text: Control


text: Mississippi State University

text: live

text: Plant

text: 4-5 leaf stage

text: Gossypium hirsutum

text: biological replicate 3

text: Leaf

text: Plant sample from Gossypium hirsutum

characteristic: title

text: Control


text: Mississippi State University

text: live

text: Plant

text: 4-5 leaf stage

text: Gossypium hirsutum

text: biological replicate 4

text: Leaf

text: Plant sample from Gossypium hirsutum

text: Control

characteristic: treatment


ICROPS 19332

characteristic: External Id

text: University of the Philippines Los Banos

text: live

text: Plant

text: reproductive maturity

text: Philippines: Iloilo

characteristic: ecotype

text: Philippines: Los Banos

text: ICROPS 19332

characteristic: isolate

text: Vitex trifolia

text: Leaves

text: Leaf sample from Vitex trifolia (ICROPS 19332)


text: Massachusetts State Public Health Lab

text: live

text: Pathogen.cl

characteristic: collection date

text: USA

text: Homo sapiens

characteristic: host

text: tissue

characteristic: isolation source

text: Acinetobacter baumannii

characteristic: strain

text: Pathogen: clinical or host-associated sample from Acinetobacter baumannii


text: Massachusetts State Public Health Lab

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.cl

text: USA

text: Homo sapiens

text: sputum

text: Escherichia coli

text: Pathogen: clinical or host-associated sample from Escherichia coli


text: Massachusetts State Public Health Lab

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

text: USA

text: Homo sapiens

text: rectal swab

text: Serratia marcescens

text: Pathogen: clinical or host-associated sample from Serratia marcescens


text: Massachusetts State Public Health Lab

text: live

text: Pathogen.cl

characteristic: NCBI submission package

characteristic: SRA accession

text: USA

characteristic: geo loc name

text: Homo sapiens

text: urine

text: Escherichia coli


text: Massachusetts State Public Health Lab

text: live

text: Pathogen.cl

text: USA

text: Homo sapiens

text: urine

text: Enterobacter cloacae

characteristic: organism

text: Pathogen: clinical or host-associated sample from Enterobacter cloacae

characteristic: title


characteristic: External Id

text: Massachusetts State Public Health Lab

text: live

text: Pathogen.cl

text: USA

text: Homo sapiens

text: urine

text: Klebsiella pneumoniae

text: Pathogen: clinical or host-associated sample from Klebsiella pneumoniae


text: Massachusetts State Public Health Lab

text: live

text: Pathogen.cl

text: USA

text: Homo sapiens

text: tracheal aspirate

text: Pseudomonas aeruginosa

text: Pathogen: clinical or host-associated sample from Pseudomonas aeruginosa


text: Massachusetts State Public Health Lab

text: live

text: Pathogen.cl

text: USA

text: Homo sapiens

text: tissue

text: Klebsiella oxytoca

text: Pathogen: clinical or host-associated sample from Klebsiella oxytoca


text: Massachusetts State Public Health Lab

text: live

text: Pathogen.cl

text: USA

text: Homo sapiens

text: bronchial

text: Pseudomonas aeruginosa


text: Massachusetts State Public Health Lab

text: live

text: Pathogen.cl

text: USA

text: Homo sapiens

text: blood

text: Klebsiella pneumoniae


text: Massachusetts State Public Health Lab

text: live

text: Pathogen.cl

text: USA

text: Homo sapiens

text: sputum

text: Pseudomonas aeruginosa


text: Massachusetts State Public Health Lab

text: live

text: Pathogen.cl

text: USA

text: Homo sapiens

text: rectal swab

text: Klebsiella pneumoniae


text: Massachusetts State Public Health Lab

text: live

text: Pathogen.cl

text: USA

text: Homo sapiens

text: tissue

text: Citrobacter amalonaticus

text: Pathogen: clinical or host-associated sample from Citrobacter amalonaticus


text: Massachusetts State Public Health Lab

text: live

text: Pathogen.cl

text: USA

text: Homo sapiens

text: urine

text: Citrobacter freundii

text: Pathogen: clinical or host-associated sample from Citrobacter freundii


text: Massachusetts State Public Health Lab

text: live

text: Pathogen.cl

text: USA

text: Homo sapiens

text: sputum

text: Enterobacter cloacae


text: Massachusetts State Public Health Lab

text: live

text: Pathogen.cl

text: USA

text: Homo sapiens

text: wound

text: Acinetobacter baumannii


text: Massachusetts State Public Health Lab

text: live

text: Pathogen.cl

text: USA

text: Homo sapiens

text: sputum

text: Klebsiella oxytoca


text: Massachusetts State Public Health Lab

text: live

text: Pathogen.cl

text: USA

text: Homo sapiens

text: urine

text: Acinetobacter baumannii


text: Massachusetts State Public Health Lab

text: live

text: Pathogen.cl

text: USA

text: Homo sapiens

text: urine

text: Citrobacter sedlakii

text: Pathogen: clinical or host-associated sample from Citrobacter sedlakii


text: Massachusetts State Public Health Lab

text: live

text: Pathogen.cl

text: USA

text: Homo sapiens

text: rectal swab

text: Serratia marcescens


text: Massachusetts State Public Health Lab

text: live

text: Pathogen.cl

text: USA

text: Homo sapiens

text: wound

text: Citrobacter freundii


text: Massachusetts State Public Health Lab

text: live

text: Pathogen.cl

text: USA

text: Homo sapiens

text: urine

text: Escherichia coli


text: Massachusetts State Public Health Lab

text: live

text: Pathogen.cl

text: USA

text: Homo sapiens

text: urine

text: Enterobacter cloacae


text: Massachusetts State Public Health Lab

text: live

text: Pathogen.cl

text: USA

text: Homo sapiens

text: sputum

text: Acinetobacter baumannii


text: China Agricultural University

text: live

text: Model organism or animal

text: 15 days after hatching

characteristic: age

text: white leghorn

characteristic: breed

text: -1 day

characteristic: dev stage

text: tibia bone marrow

characteristic: isolate

text: Gallus gallus

characteristic: repliacate

text: not collected

characteristic: sex

text: tibia

characteristic: tissue

text: Model organism or animal sample from Gallus gallus


text: China Agricultural University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Model organism or animal

text: 15 days after hatching

text: white leghorn

text: 0 day

text: tibia bone marrow

text: Gallus gallus

text: not collected

text: tibia


text: China Agricultural University

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

text: 15 days after hatching

text: white leghorn

text: 1 day

text: tibia bone marrow

text: Gallus gallus

text: not collected

text: tibia


text: China Agricultural University

text: live

text: Model organism or animal

characteristic: NCBI submission package

characteristic: SRA accession

text: 15 days after hatching

text: white leghorn

text: 11 day

text: tibia bone marrow

text: Gallus gallus

text: not collected

text: tibia


text: China Agricultural University

text: live

text: Model organism or animal

text: 15 days after hatching

text: white leghorn

text: 22 day

text: tibia bone marrow

text: Gallus gallus

characteristic: organism

text: not collected

text: tibia

characteristic: title


characteristic: External Id

text: Wadsworth Center - NYS DOH

text: live

text: MLST258 PubMLST

characteristic: MLST

text: Microbe, viral or environmental

characteristic: collection date

text: USA

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: rectal swab

characteristic: isolation source

text: Klebsiella pneumoniae

text: whole organism

characteristic: sample type

characteristic: strain

text: Microbe sample from Klebsiella pneumoniae


text: Wadsworth Center - NYS DOH

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MLST162 Achtman

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: rectal swab

text: Escherichia coli

text: whole organism

text: Microbe sample from Escherichia coli


text: Wadsworth Center - NYS DOH

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: MLST147 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: urine

text: Klebsiella pneumoniae

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

characteristic: INSDC status

text: MLST2 Pasteur

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: USA

text: Homo sapiens

text: sputum

text: Acinetobacter baumannii

text: whole organism

text: Microbe sample from Acinetobacter baumannii


text: Wadsworth Center - NYS DOH

text: live

text: MLST1142 Pasteur

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: SRA accession

text: USA

text: Homo sapiens

text: sputum

text: Acinetobacter baumannii

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

text: MLST147 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: respiratory

text: Klebsiella pneumoniae

characteristic: organism

text: whole organism

characteristic: title


characteristic: External Id

text: Wadsworth Center - NYS DOH

text: live

text: MLST2 Pasteur

characteristic: MLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: rectal swab

text: Acinetobacter baumannii

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

text: MLST22 PubMLST

text: Microbe, viral or environmental

characteristic: collection date

text: USA

characteristic: geo loc name

text: Homo sapiens

text: rectal swab

text: Citrobacter freundii

text: whole organism

text: Microbe sample from Citrobacter freundii


text: Wadsworth Center - NYS DOH

text: live

text: MLST- PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

characteristic: host

text: rectal swab

characteristic: isolation source

text: Proteus mirabilis

text: whole organism

text: Microbe sample from Proteus mirabilis


text: Wadsworth Center - NYS DOH

text: live

text: MLST258 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: blood

text: Klebsiella oxytoca

text: whole organism

characteristic: sample type

characteristic: strain

text: Microbe sample from Klebsiella oxytoca


text: Wadsworth Center - NYS DOH

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MLST361 Achtman

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: urine

text: Escherichia coli

text: whole organism

text: Microbe sample from Escherichia coli


text: Massachusetts State Public Health Lab

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

text: USA

text: environmental

text: sink drain

text: Klebsiella oxytoca

text: whole organism

text: Microbe sample from Klebsiella oxytoca


text: Massachusetts State Public Health Lab

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: USA

text: environmental

text: sink drain

text: Klebsiella pneumoniae

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

text: MLST2 Pasteur

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: SRA accession

text: USA

text: Homo sapiens

text: axilla-groin

text: Acinetobacter baumannii

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

text: MLST- Pasteur

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: rectal swab

text: Acinetobacter radioresistens

characteristic: organism

text: whole organism

text: Microbe sample from Acinetobacter radioresistens

characteristic: title


characteristic: External Id

text: Wadsworth Center - NYS DOH

text: live

text: MLST16 PubMLST

characteristic: MLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: urine

text: Klebsiella pneumoniae

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

text: MLST69 Achtman

text: Microbe, viral or environmental

characteristic: collection date

text: USA

characteristic: geo loc name

text: Homo sapiens

text: rectal swab

text: Escherichia coli

text: whole organism

text: Microbe sample from Escherichia coli


text: Wadsworth Center - NYS DOH

text: live

text: MLST2 Pasteur

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

characteristic: host

text: urine

characteristic: isolation source

text: Acinetobacter baumannii

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

text: MLST2 Pasteur

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: tracheal aspirate

text: Acinetobacter baumannii

text: whole organism

characteristic: sample type

characteristic: strain


text: Wadsworth Center - NYS DOH

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MLST147 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: right hip

text: Klebsiella pneumoniae

text: whole organism


text: Wadsworth Center - NYS DOH

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: MLST2 Pasteur

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: blood

text: Acinetobacter baumannii

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

characteristic: INSDC status

text: MLST2 Pasteur

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: USA

text: Homo sapiens

text: sputum

text: Acinetobacter baumannii

text: whole organism


text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: collected by

text: Argentina:Entre Rios

text: Boot swab (Gallus gallus domesticus)

text: Salmonella enterica

text: Salmonella enterica


characteristic: External Id

text: live

text: Pathogen.env

text: Argentina:Entre Rios

text: Dust (Gallus gallus domesticus)

text: Salmonella enterica

characteristic: organism

text: Salmonella enterica

characteristic: title


text: Wadsworth Center - NYS DOH

text: live

text: MLST4843 PubMLST

characteristic: MLST

text: Microbe, viral or environmental

characteristic: collection date

text: USA

characteristic: geo loc name

text: Homo sapiens

text: left hip

text: Klebsiella pneumoniae

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

text: MLST4843 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

characteristic: host

text: sacrum

characteristic: isolation source

text: Klebsiella pneumoniae

text: whole organism

characteristic: sample type


text: Wadsworth Center - NYS DOH

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MLST4843 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: left leg

text: Klebsiella pneumoniae

text: whole organism

characteristic: strain


text: Wadsworth Center - NYS DOH

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MLST2 Pasteur

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: wound

text: Acinetobacter baumannii

text: whole organism


text: USDA Agricultural Research Service

text: live

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Kenya

text: Buffalo

text: Foot-and-mouth disease

characteristic: host disease

characteristic: isolate

text: oropharyngeal fluid

text: not collected

characteristic: lat lon

text: Foot-and-mouth disease virus

text: Pathogen: clinical or host-associated sample from Foot-and-mouth disease virus


characteristic: External Id

text: USDA Agricultural Research Service

text: live

text: Pathogen.cl

characteristic: collection date

text: Kenya

text: Buffalo

text: Foot-and-mouth disease

text: plaque isolate from oropharyngeal fluid

text: not collected

text: Foot-and-mouth disease virus

characteristic: organism

characteristic: title


text: Lawrence Berkeley National Laboratory

text: live

text: Metagenome or environmental

text: DNA

characteristic: analyte type

characteristic: biospecimen_repository_sample id

text: Homo sapiens

characteristic: host

text: female

characteristic: host sex

text: No

text: esophagus

characteristic: isolation source

text: human metagenome

text: Case-Control

characteristic: study design

text: Foregut Microbiome in Development of Esophageal Adenocarcinoma

text: Yes

characteristic: submitted_sample id

text: Metagenome or environmental sample from human metagenome


text: Lawrence Berkeley National Laboratory

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

text: DNA

text: Homo sapiens

text: female

text: No

text: feces

text: human metagenome

text: Case-Control

text: Yes


characteristic: External Id

text: Lawrence Berkeley National Laboratory

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

text: Homo sapiens

text: female

text: No

text: oral

text: human metagenome

text: Case-Control

text: Yes


text: Lawrence Berkeley National Laboratory

text: live

text: Metagenome or environmental

text: DNA

text: Homo sapiens

text: female

text: No

text: stomach

text: human metagenome

characteristic: organism

text: Case-Control

text: Yes

characteristic: title


text: Lawrence Berkeley National Laboratory

text: live

text: Metagenome or environmental

text: DNA

characteristic: analyte type

characteristic: biospecimen_repository_sample id

text: Homo sapiens

text: male

text: No

text: esophagus

text: human metagenome

text: Case-Control

text: No


text: Lawrence Berkeley National Laboratory

text: live

text: Metagenome or environmental

text: DNA

text: Homo sapiens

characteristic: host

text: male

characteristic: host sex

text: No

text: feces

text: human metagenome

text: Case-Control

text: No


text: Lawrence Berkeley National Laboratory

text: live

text: Metagenome or environmental

text: DNA

text: Homo sapiens

text: male

text: No

text: oral

characteristic: isolation source

text: human metagenome

text: Case-Control

characteristic: study design

text: No


text: Lawrence Berkeley National Laboratory

characteristic: INSDC center name

text: live

text: Metagenome or environmental

text: DNA

text: Homo sapiens

text: male

text: No

text: stomach

text: human metagenome

text: Case-Control

text: No

characteristic: submitted_sample id


text: Lawrence Berkeley National Laboratory

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: DNA

text: Homo sapiens

text: female

text: No

text: esophagus

text: human metagenome

text: Case-Control

text: No


text: Lawrence Berkeley National Laboratory

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: DNA

text: Homo sapiens

text: female

text: No

text: feces

text: human metagenome

text: Case-Control

text: No


characteristic: External Id

text: Lawrence Berkeley National Laboratory

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

text: DNA

text: Homo sapiens

text: female

text: No

text: oral

text: human metagenome

text: Case-Control

text: No


text: Lawrence Berkeley National Laboratory

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

text: Homo sapiens

text: female

text: No

text: stomach

text: human metagenome

text: Case-Control

text: No


text: Lawrence Berkeley National Laboratory

text: live

text: Metagenome or environmental

text: DNA

text: Homo sapiens

text: male

text: No

text: esophagus

text: human metagenome

characteristic: organism

text: Case-Control

text: Yes

characteristic: title


text: Lawrence Berkeley National Laboratory

text: live

text: Metagenome or environmental

text: DNA

characteristic: analyte type

characteristic: biospecimen_repository_sample id

text: Homo sapiens

text: male

text: No

text: feces

text: human metagenome

text: Case-Control

text: Yes


text: Lawrence Berkeley National Laboratory

text: live

text: Metagenome or environmental

text: DNA

text: Homo sapiens

characteristic: host

text: male

characteristic: host sex

text: No

text: oral

text: human metagenome

text: Case-Control

text: Yes


text: Lawrence Berkeley National Laboratory

text: live

text: Metagenome or environmental

text: DNA

text: Homo sapiens

text: male

text: No

text: stomach

characteristic: isolation source

text: human metagenome

text: Case-Control

characteristic: study design

text: Yes


text: UW Madison

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: UWHC

characteristic: collected by

characteristic: collection date

text: Homo sapiens

characteristic: host disease

text: Homo sapien

characteristic: isolate

text: nasal swab

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


characteristic: External Id

text: UW Madison

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: UWHC

text: USA: Wisconsin, Columbia County

characteristic: geo loc name

text: Homo sapiens

text: Homo sapien

text: nasal swab

text: Severe acute respiratory syndrome coronavirus 2


text: UW Madison

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: UWHC

text: USA: Wisconsin, Jackson County

text: Homo sapiens

text: Homo sapien

text: nasal swab

characteristic: organism

characteristic: title


text: UW Madison

text: live

text: SARS-CoV-2: clinical or host-associated

text: UWHC

text: USA: Wisconsin, Dane County

text: Homo sapiens

characteristic: host

text: Homo sapien

text: nasal swab

characteristic: isolation source


text: UW Madison

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: UWHC

characteristic: collected by

text: Homo sapiens

text: Homo sapien

text: nasal swab


text: UW Madison

text: live

text: SARS-CoV-2: clinical or host-associated

text: UWHC

characteristic: collection date

text: USA: Wisconsin, Manitowoc County

text: Homo sapiens

characteristic: host disease

text: Homo sapien

text: nasal swab


characteristic: External Id

text: UW Madison

text: live

text: SARS-CoV-2: clinical or host-associated

text: UWHC

text: USA: Wisconsin, Sheboygan County

text: Homo sapiens

text: Homo sapien

characteristic: isolate

text: nasal swab


text: UW Madison

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: UWHC

text: USA: Wisconsin, Sauk County

text: Homo sapiens

text: Homo sapien

text: nasal swab


text: UW Madison

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: UWHC

text: USA: Wisconsin, Green Lake County

text: Homo sapiens

text: Homo sapien

text: nasal swab


text: UW Madison

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: UWHC

text: USA: Wisconsin, Outagamie County

characteristic: geo loc name

text: Homo sapiens

text: Homo sapien

text: nasal swab


text: UW Madison

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

characteristic: SRA accession

text: UWHC

text: USA: Wisconsin, Milwaukee County

text: Homo sapiens

text: Homo sapien

text: nasal swab


text: UW Madison

text: live

text: SARS-CoV-2: clinical or host-associated

text: UWHC

text: USA: Wisconsin, Barron County

text: Homo sapiens

text: Homo sapien

text: nasal swab

characteristic: organism

characteristic: title


text: UW Madison

text: live

text: SARS-CoV-2: clinical or host-associated

text: UWHC

text: USA: Wisconsin, Walworth County

text: Homo sapiens

characteristic: host

text: Homo sapien

text: nasal swab

characteristic: isolation source


text: UW Madison

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: UWHC

characteristic: collected by

text: USA: Wisconsin, Iowa County

text: Homo sapiens

text: Homo sapien

text: nasal swab


text: UW Madison

text: live

text: SARS-CoV-2: clinical or host-associated

text: UWHC

characteristic: collection date

text: USA: Wisconsin, Dodge County

text: Homo sapiens

characteristic: host disease

text: Homo sapien

text: nasal swab


characteristic: External Id

text: UW Madison

text: live

text: SARS-CoV-2: clinical or host-associated

text: UWHC

text: USA: Wisconsin, Green County

text: Homo sapiens

text: Homo sapien

characteristic: isolate

text: nasal swab


text: UW Madison

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: UWHC

text: USA: Wisconsin, Grant County

text: Homo sapiens

text: Homo sapien

text: nasal swab


text: UW Madison

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: UWHC

text: USA: Wisconsin, Eau Claire County

text: Homo sapiens

text: Homo sapien

text: nasal swab


text: UW Madison

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: UWHC

text: USA: Wisconsin, Jefferson County

characteristic: geo loc name

text: Homo sapiens

text: Homo sapien

text: nasal swab


text: UW Madison

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

characteristic: SRA accession

text: UWHC

text: USA: Wisconsin, Clark County

text: Homo sapiens

text: Homo sapien

text: nasal swab


text: UW Madison

text: live

text: SARS-CoV-2: clinical or host-associated

text: UWHC

text: USA: Wisconsin, Dane County

text: Homo sapiens

text: Homo sapien

text: nasal swab

characteristic: organism

characteristic: title


text: UW Madison

text: live

text: SARS-CoV-2: clinical or host-associated

text: UWHC

text: USA: Wisconsin, Columbia County

text: Homo sapiens

characteristic: host

text: Homo sapien

text: nasal swab

characteristic: isolation source


text: UW Madison

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: UWHC

characteristic: collected by

text: USA: Wisconsin, Burnett County

text: Homo sapiens

text: Homo sapien

text: nasal swab


text: UW Madison

text: live

text: SARS-CoV-2: clinical or host-associated

text: UWHC

characteristic: collection date

text: USA: Wisconsin, La Crosse County

text: Homo sapiens

characteristic: host disease

text: Homo sapien

text: nasal swab


characteristic: External Id

text: UW Madison

text: live

text: SARS-CoV-2: clinical or host-associated

text: UWHC

text: USA: Wisconsin, Chippewa County

text: Homo sapiens

text: Homo sapien

characteristic: isolate

text: nasal swab


text: UW Madison

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: UWHC

text: USA: Wisconsin, Sheboygan County

text: Homo sapiens

text: Homo sapien

text: nasal swab


text: UW Madison

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: UWHC

text: USA: Wisconsin, Pepin County

text: Homo sapiens

text: Homo sapien

text: nasal swab


text: UW Madison

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: UWHC

text: USA: Wisconsin, Winnebago County

characteristic: geo loc name

text: Homo sapiens

text: Homo sapien

text: nasal swab


text: UW Madison

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

characteristic: SRA accession

text: UWHC

text: USA: Wisconsin, Waukesha County

text: Homo sapiens

text: Homo sapien

text: nasal swab


text: UW Madison

text: live

text: SARS-CoV-2: clinical or host-associated

text: UWHC

text: USA: Wisconsin, Marinette County

text: Homo sapiens

text: Homo sapien

text: nasal swab

characteristic: organism

characteristic: title


text: UW Madison

text: live

text: SARS-CoV-2: clinical or host-associated

text: UWHC

text: USA: Wisconsin, Saint Croix County

text: Homo sapiens

characteristic: host

text: Homo sapien

text: nasal swab

characteristic: isolation source


text: UW Madison

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: UWHC

characteristic: collected by

text: USA: Wisconsin, Portage County

text: Homo sapiens

text: Homo sapien

text: nasal swab


text: UW Madison

text: live

text: SARS-CoV-2: clinical or host-associated

text: UWHC

characteristic: collection date

text: USA: Wisconsin, Milwaukee County

text: Homo sapiens

characteristic: host disease

text: Homo sapien

text: nasal swab


characteristic: External Id

text: UW Madison

text: live

text: SARS-CoV-2: clinical or host-associated

text: UWHC

text: USA: Wisconsin, Racine County

text: Homo sapiens

text: Homo sapien

characteristic: isolate

text: nasal swab


text: Public Health England

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

characteristic: sequence type

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Escherichia coli serovar Escherichia coli 1610378


text: Public Health England

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: PHE

text: United Kingdom: United Kingdom

characteristic: geo loc name

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1610379


text: Public Health England

text: live

text: Pathogen.env

characteristic: SRA accession

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

characteristic: host

text: Not available

text: human

characteristic: isolation source

text: Shigella sonnei

characteristic: organism

text: None detected

text: Shigella sonnei

text: Shigella sonnei serovar Shigella sonnei 1610394

characteristic: title


characteristic: External Id

text: Public Health England

characteristic: INSDC center name

text: live

text: Pathogen.env

text: PHE

characteristic: collected by

characteristic: collection date

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

characteristic: host disease

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1610411


text: Public Health England

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

characteristic: sequence type

text: Escherichia coli

characteristic: serovar

text: Escherichia coli serovar Escherichia coli 1610353


text: Public Health England

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

characteristic: strain

text: Escherichia coli serovar Escherichia coli 1610402


characteristic: GenBank accession

text: Columbia University

text: live

text: MIUVIG.host-associated

characteristic: NCBI submission package

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIUVIG:5.0

characteristic: description

text: forest biome [ENVO:01000174]

text: forest [ENVO:00000111]

text: Uganda: Bwindi National Park

characteristic: geo loc name

text: Rhinolophus sp.

characteristic: host

characteristic: isolate

text: feces

text: 1.11 S 29.71 E

characteristic: lat lon

text: Bat coronavirus

text: viral fraction RNA metagenome (RNA virome)

characteristic: specimen voucher

text: MIUVIG Uncultivated Virus Genome sample from Bat coronavirus


characteristic: External Id

text: Columbia University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIUVIG.host-associated

characteristic: collection date

text: Keywords: GSC:MIxS;MIUVIG:5.0

text: forest biome [ENVO:01000174]

text: urban [ENVO:01000249]

text: Rwanda: outside Mgahinga Gorilla National Park

text: Rhinolophus sp.

text: feces

characteristic: isolation source

text: 1.50 S 29.63 E

text: Bat coronavirus

characteristic: organism

text: AABSMF

characteristic: title


text: USDA Agricultural Research Service

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

text: Kenya

text: Buffalo

text: Foot-and-mouth disease

characteristic: host disease

text: plaque isolate from oropharyngeal fluid

text: not collected

text: Foot-and-mouth disease virus

characteristic: strain


text: Public Health England

text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: SRA accession

text: PHE

characteristic: collected by

text: United Kingdom: United Kingdom

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: Not available

text: human

text: Escherichia coli

text: None detected

characteristic: sequence type

text: Escherichia coli

characteristic: serovar

text: Escherichia coli serovar Escherichia coli 1610398


characteristic: External Id

text: Public Health England

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: PHE

characteristic: collection date

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1610376


text: Public Health England

characteristic: INSDC last update

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: food

characteristic: isolation source

text: Listeria monocytogenes

characteristic: organism

text: None detected

text: Serotype 1/2a

text: Listeria monocytogenes serovar Serotype 1/2a 1610396

characteristic: title


text: PulseNet Next Generation Subtyping Methods Unit

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: WA

text: USA:WA

text: turkey

text: Salmonella enterica

text: Salmonella enterica


text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: SRA accession

text: WA

text: USA:WA

text: chicken

text: Salmonella enterica

characteristic: strain

text: Salmonella enterica


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

characteristic: collected by

text: USA: California

characteristic: geo loc name

text: Homo sapiens

characteristic: host

characteristic: host disease

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059149/2022

characteristic: isolate

text: clinical

text: Baseline surveillance


characteristic: External Id

text: California Department of Public Health

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059151/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

characteristic: collection date

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059155/2022

text: clinical

characteristic: isolation source

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: California Department of Public Health

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059157/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: Baseline surveillance

characteristic: title


text: California Department of Public Health

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059158/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: CDPH VBL

characteristic: collected by

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059161/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059165/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

characteristic: host disease

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059166/2022

characteristic: isolate

text: clinical

text: Baseline surveillance


characteristic: External Id

text: California Department of Public Health

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059170/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059171/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

characteristic: collection date

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059172/2022

text: clinical

characteristic: isolation source

text: Baseline surveillance


text: California Department of Public Health

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059186/2022

text: clinical

characteristic: organism

text: Baseline surveillance


text: California Department of Public Health

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059191/2022

text: clinical

text: Baseline surveillance

characteristic: title


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059192/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: CDPH VBL

characteristic: collected by

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059194/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059195/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

characteristic: host disease

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059197/2022

characteristic: isolate

text: clinical

text: Baseline surveillance


characteristic: External Id

text: California Department of Public Health

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059199/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059200/2022

text: clinical

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

characteristic: collection date

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059201/2022

text: clinical

characteristic: isolation source

text: Severe acute respiratory syndrome coronavirus 2

text: Baseline surveillance


text: California Department of Public Health

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059204/2022

text: clinical

characteristic: organism

text: Baseline surveillance


text: California Department of Public Health

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059216/2022

text: clinical

text: Baseline surveillance

characteristic: title


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059218/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: CDPH VBL

characteristic: collected by

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059219/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059220/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

characteristic: host disease

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059223/2022

characteristic: isolate

text: clinical

text: Baseline surveillance


characteristic: External Id

text: California Department of Public Health

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059227/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059228/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

characteristic: collection date

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059232/2022

text: clinical

characteristic: isolation source

text: Baseline surveillance


text: California Department of Public Health

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059233/2022

text: clinical

characteristic: organism

text: Baseline surveillance


text: California Department of Public Health

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059238/2022

text: clinical

text: Baseline surveillance

characteristic: title


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059239/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: CDPH VBL

characteristic: collected by

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059241/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059242/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

characteristic: host disease

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059243/2022

characteristic: isolate

text: clinical

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


characteristic: External Id

text: California Department of Public Health

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059246/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Baseline surveillance


text: California Department of Public Health

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059247/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

characteristic: collection date

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059249/2022

text: clinical

characteristic: isolation source

text: Baseline surveillance


text: California Department of Public Health

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059250/2022

text: clinical

characteristic: organism

text: Baseline surveillance


text: California Department of Public Health

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059252/2022

text: clinical

text: Baseline surveillance

characteristic: title


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059255/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: CDPH VBL

characteristic: collected by

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059257/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059265/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

characteristic: host disease

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059267/2022

characteristic: isolate

text: clinical

text: Baseline surveillance


characteristic: External Id

text: California Department of Public Health

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059274/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059277/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

characteristic: collection date

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059280/2022

text: clinical

characteristic: isolation source

text: Baseline surveillance


text: California Department of Public Health

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059281/2022

text: clinical

characteristic: organism

text: Baseline surveillance


text: California Department of Public Health

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

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text: clinical

text: Baseline surveillance

characteristic: title


text: California Department of Public Health

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text: SARS-CoV-2: clinical or host-associated

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text: CDPH VBL

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text: clinical

text: Baseline surveillance


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text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: CDPH VBL

characteristic: collected by

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059297/2022

text: clinical

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

characteristic: geo loc name

text: Homo sapiens

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text: SARS-CoV-2/Human/USA/CA-CDPH-2000059299/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

characteristic: host disease

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059301/2022

characteristic: isolate

text: clinical

text: Baseline surveillance


characteristic: External Id

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text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

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text: clinical

text: Baseline surveillance


text: California Department of Public Health

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

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text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

characteristic: collection date

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059305/2022

text: clinical

characteristic: isolation source

text: Baseline surveillance


text: California Department of Public Health

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059306/2022

text: clinical

characteristic: organism

text: Baseline surveillance


text: California Department of Public Health

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

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text: clinical

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characteristic: title


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text: clinical

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text: live

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characteristic: SRA accession

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text: Homo sapiens

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text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

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characteristic: geo loc name

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text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

characteristic: host disease

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059313/2022

characteristic: isolate

text: clinical

text: Baseline surveillance


characteristic: External Id

text: California Department of Public Health

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text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

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text: clinical

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text: California Department of Public Health

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

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text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

characteristic: collection date

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059325/2022

text: clinical

characteristic: isolation source

text: Baseline surveillance


text: California Department of Public Health

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059326/2022

text: clinical

characteristic: organism

text: Baseline surveillance


text: California Department of Public Health

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059331/2022

text: clinical

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2

characteristic: title


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

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text: CDPH VBL

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text: Homo sapiens

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text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Baseline surveillance


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text: live

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characteristic: SRA accession

text: CDPH VBL

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text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059334/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059335/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

characteristic: host disease

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059338/2022

characteristic: isolate

text: clinical

text: Baseline surveillance


characteristic: External Id

text: California Department of Public Health

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text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059340/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059341/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

characteristic: collection date

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059342/2022

text: clinical

characteristic: isolation source

text: Baseline surveillance


text: California Department of Public Health

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059344/2022

text: clinical

characteristic: organism

text: Baseline surveillance


text: California Department of Public Health

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059347/2022

text: clinical

text: Baseline surveillance

characteristic: title


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

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characteristic: NCBI submission package

text: CDPH VBL

text: USA: California

text: Homo sapiens

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text: clinical

text: Baseline surveillance


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text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: CDPH VBL

characteristic: collected by

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text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059349/2022

text: clinical

text: Baseline surveillance


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text: live

text: SARS-CoV-2: clinical or host-associated

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characteristic: geo loc name

text: Homo sapiens

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text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

characteristic: host disease

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059355/2022

characteristic: isolate

text: clinical

text: Baseline surveillance


characteristic: External Id

text: California Department of Public Health

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text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

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text: Homo sapiens

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text: clinical

text: Baseline surveillance


text: California Department of Public Health

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059362/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

characteristic: collection date

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059366/2022

text: clinical

characteristic: isolation source

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: California Department of Public Health

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059371/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: Baseline surveillance


text: California Department of Public Health

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059373/2022

text: clinical

text: Baseline surveillance

characteristic: title


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

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text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059374/2022

text: clinical

text: Baseline surveillance


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text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: CDPH VBL

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text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059376/2022

text: clinical

text: Baseline surveillance


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text: live

text: SARS-CoV-2: clinical or host-associated

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characteristic: geo loc name

text: Homo sapiens

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text: clinical

text: Baseline surveillance


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text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

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text: Homo sapiens

characteristic: host disease

text: SARS-CoV-2/Human/USA/CA-CDPH-2000059380/2022

characteristic: isolate

text: clinical

text: Baseline surveillance


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text: CDPH VBL

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text: Homo sapiens

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text: clinical

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characteristic: INSDC first public

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text: live

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text: Homo sapiens

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text: clinical

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text: live

text: SARS-CoV-2: clinical or host-associated

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characteristic: collection date

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text: clinical

characteristic: isolation source

text: Baseline surveillance


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characteristic: INSDC secondary accession

text: live

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text: clinical

characteristic: organism

text: Baseline surveillance


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text: live

characteristic: INSDC status

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text: Homo sapiens

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text: clinical

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characteristic: title


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text: live

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text: CDPH VBL

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text: Homo sapiens

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text: clinical

text: Baseline surveillance


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text: live

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text: clinical

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characteristic: geo loc name

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text: clinical

text: Baseline surveillance


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text: live

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text: CDPH VBL

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characteristic: isolate

text: clinical

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text: clinical

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characteristic: INSDC first public

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text: CDPH VBL

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text: clinical

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text: live

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text: clinical

characteristic: isolation source

text: Baseline surveillance


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text: clinical

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text: clinical

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text: clinical

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text: clinical

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