text: University of Tehran

text: live

text: MIMAG.water

text: interval

text: Keywords: GSC:MIxS;MIMAG:5.0

text: groundwater microbiome

text: water

text: groundwater

text: Iran: Tehran

text: groundwater

text: 35.738528 N 51.259444 E

text: groundwater metagenome

characteristic: metagenome-source

text: Oligoflexia bacterium

text: metagenomic assembly

text: MIMAG Metagenome-assembled Genome sample from Oligoflexia bacterium


status: PUBLIC

characteristic: External Id

text: University of Tehran

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIMAG.water

characteristic: NCBI submission model

characteristic: NCBI submission package

tag: attribute

text: interval

characteristic: depth

text: This BioSample is a metagenomic assembly obtained from the groundwater metagenome BioSample: SAMN28053962.

text: Keywords: GSC:MIxS;MIMAG:5.0

characteristic: description

text: groundwater microbiome

text: water

text: groundwater

characteristic: environmental-sample

text: Iran: Tehran

characteristic: isolate

text: groundwater

text: 35.738528 N 51.259444 E

text: groundwater metagenome

characteristic: metagenomic

text: Elusimicrobiales bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample-type

characteristic: temp

text: MIMAG Metagenome-assembled Genome sample from Elusimicrobiales bacterium

characteristic: title


text: University of Tehran

text: live

text: MIMAG.water

text: interval

text: Keywords: GSC:MIxS;MIMAG:5.0

text: groundwater microbiome

text: water

text: groundwater

text: Iran: Tehran

text: groundwater

text: 35.738528 N 51.259444 E

text: groundwater metagenome

characteristic: metagenome-source

text: Geothrix sp.

text: metagenomic assembly

text: MIMAG Metagenome-assembled Genome sample from Geothrix sp.


characteristic: External Id

text: University of Tehran

text: live

text: MIMAG.water

text: interval

text: Keywords: GSC:MIxS;MIMAG:5.0

text: groundwater microbiome

text: water

text: groundwater

text: Iran: Tehran

text: groundwater

text: 35.738528 N 51.259444 E

text: groundwater metagenome

text: Sulfuritalea sp.

text: metagenomic assembly

text: MIMAG Metagenome-assembled Genome sample from Sulfuritalea sp.


text: University of Tehran

characteristic: INSDC center name

text: live

text: MIMAG.water

text: interval

text: Keywords: GSC:MIxS;MIMAG:5.0

text: groundwater microbiome

text: water

text: groundwater

text: Iran: Tehran

text: groundwater

text: 35.738528 N 51.259444 E

text: groundwater metagenome

text: Vicinamibacteria bacterium

text: metagenomic assembly

text: MIMAG Metagenome-assembled Genome sample from Vicinamibacteria bacterium


text: University of Tehran

characteristic: INSDC first public

text: live

text: MIMAG.water

text: interval

text: Keywords: GSC:MIxS;MIMAG:5.0

text: groundwater microbiome

text: water

text: groundwater

text: Iran: Tehran

text: groundwater

text: 35.738528 N 51.259444 E

text: groundwater metagenome

text: Desulfobacula sp.

text: metagenomic assembly

text: MIMAG Metagenome-assembled Genome sample from Desulfobacula sp.


text: University of Tehran

characteristic: INSDC last update

text: live

text: MIMAG.water

text: interval

text: Keywords: GSC:MIxS;MIMAG:5.0

text: groundwater microbiome

text: water

text: groundwater

text: Iran: Tehran

text: groundwater

text: 35.738528 N 51.259444 E

text: groundwater metagenome

text: Candidatus Woesearchaeota archaeon

text: metagenomic assembly

text: MIMAG Metagenome-assembled Genome sample from Candidatus Woesearchaeota archaeon


text: University of Tehran

text: live

characteristic: INSDC status

text: MIMAG.water

text: interval

text: Keywords: GSC:MIxS;MIMAG:5.0

text: groundwater microbiome

text: water

text: groundwater

text: Iran: Tehran

text: groundwater

text: 35.738528 N 51.259444 E

text: groundwater metagenome

text: Ramlibacter sp.

text: metagenomic assembly

text: MIMAG Metagenome-assembled Genome sample from Ramlibacter sp.


text: University of Tehran

text: live

text: MIMAG.water

characteristic: NCBI submission model

text: interval

text: Keywords: GSC:MIxS;MIMAG:5.0

text: groundwater microbiome

text: water

text: groundwater

text: Iran: Tehran

text: groundwater

text: 35.738528 N 51.259444 E

text: groundwater metagenome

text: Pseudomonas sp.

text: metagenomic assembly

text: MIMAG Metagenome-assembled Genome sample from Pseudomonas sp.


text: University of Tehran

text: live

text: MIMAG.water

characteristic: NCBI submission package

text: interval

text: Keywords: GSC:MIxS;MIMAG:5.0

text: groundwater microbiome

text: water

text: groundwater

text: Iran: Tehran

text: groundwater

text: 35.738528 N 51.259444 E

text: groundwater metagenome

text: Lysobacter sp.

text: metagenomic assembly

text: MIMAG Metagenome-assembled Genome sample from Lysobacter sp.


text: University of Tehran

text: live

text: MIMAG.water

text: interval

characteristic: depth

text: Keywords: GSC:MIxS;MIMAG:5.0

text: groundwater microbiome

text: water

text: groundwater

text: Iran: Tehran

text: groundwater

text: 35.738528 N 51.259444 E

text: groundwater metagenome

text: Burkholderiales bacterium

text: metagenomic assembly

text: MIMAG Metagenome-assembled Genome sample from Burkholderiales bacterium


text: University of Tehran

text: live

text: MIMAG.water

text: interval

text: Keywords: GSC:MIxS;MIMAG:5.0

characteristic: description

text: groundwater microbiome

text: water

text: groundwater

text: Iran: Tehran

text: groundwater

text: 35.738528 N 51.259444 E

text: groundwater metagenome

text: Anaeromyxobacteraceae bacterium

text: metagenomic assembly

text: MIMAG Metagenome-assembled Genome sample from Anaeromyxobacteraceae bacterium


text: University of Tehran

text: live

text: MIMAG.water

text: interval

text: Keywords: GSC:MIxS;MIMAG:5.0

text: groundwater microbiome

text: water

text: groundwater

characteristic: environmental-sample

text: Iran: Tehran

text: groundwater

text: 35.738528 N 51.259444 E

text: groundwater metagenome

text: Alphaproteobacteria bacterium

text: metagenomic assembly

text: MIMAG Metagenome-assembled Genome sample from Alphaproteobacteria bacterium


text: University of Tehran

text: live

text: MIMAG.water

text: interval

text: Keywords: GSC:MIxS;MIMAG:5.0

text: groundwater microbiome

text: water

text: groundwater

text: Iran: Tehran

characteristic: isolate

text: groundwater

text: 35.738528 N 51.259444 E

text: groundwater metagenome

text: Flavobacteriaceae bacterium

text: metagenomic assembly

text: MIMAG Metagenome-assembled Genome sample from Flavobacteriaceae bacterium


text: University of Tehran

text: live

text: MIMAG.water

text: interval

text: Keywords: GSC:MIxS;MIMAG:5.0

text: groundwater microbiome

text: water

text: groundwater

text: Iran: Tehran

text: groundwater

text: 35.738528 N 51.259444 E

text: groundwater metagenome

characteristic: metagenomic

text: Steroidobacteraceae bacterium

text: metagenomic assembly

text: MIMAG Metagenome-assembled Genome sample from Steroidobacteraceae bacterium


text: University of Tehran

text: live

text: MIMAG.water

text: interval

text: Keywords: GSC:MIxS;MIMAG:5.0

text: groundwater microbiome

text: water

text: groundwater

text: Iran: Tehran

text: groundwater

text: 35.738528 N 51.259444 E

text: groundwater metagenome

text: Thermoanaerobaculia bacterium

characteristic: organism

text: metagenomic assembly

text: MIMAG Metagenome-assembled Genome sample from Thermoanaerobaculia bacterium


text: University of Tehran

text: live

text: MIMAG.water

text: interval

text: Keywords: GSC:MIxS;MIMAG:5.0

text: groundwater microbiome

text: water

text: groundwater

text: Iran: Tehran

text: groundwater

text: 35.738528 N 51.259444 E

text: groundwater metagenome

text: Rhodoferax sp.

text: metagenomic assembly

characteristic: sample-type

text: MIMAG Metagenome-assembled Genome sample from Rhodoferax sp.


text: State Hygienic Laboratory at the University of Iowa

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: University of Iowa Hospitals and Clinics

text: USA: Iowa

text: Homo sapiens

characteristic: host

text: clinical

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


characteristic: External Id

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Iowa

text: Homo sapiens

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Baseline surveillance

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Iowa

text: Homo sapiens

text: clinical

text: Baseline surveillance


characteristic: INSDC last update

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: USA: Iowa

text: Homo sapiens

text: clinical


text: NJDOH PHEL-Virology's shared submissions

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

text: NJDOH, Public Health and Environmental Laboratories

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22021716/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022039/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: Unknown

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022040/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022210/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022211/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022212/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022213/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022214/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022215/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022216/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022217/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022218/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022219/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022220/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: NJDOH PHEL-Virology's shared submissions

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022221/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: NJDOH, Public Health and Environmental Laboratories

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022222/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022223/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022224/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022225/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022227/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022229/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022230/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022231/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022233/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022234/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022236/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022330/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022333/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: NJDOH PHEL-Virology's shared submissions

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022337/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: NJDOH, Public Health and Environmental Laboratories

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022338/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022339/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022340/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022341/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022354/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022355/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022356/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022360/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022362/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022363/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022364/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022462/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022464/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: NJDOH PHEL-Virology's shared submissions

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022467/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: NJDOH, Public Health and Environmental Laboratories

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022468/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022471/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022481/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022485/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022491/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022497/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022503/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: Unknown

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022525/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: Unknown

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022528/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022551/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022552/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022553/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022554/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: NJDOH PHEL-Virology's shared submissions

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022555/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: NJDOH, Public Health and Environmental Laboratories

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022556/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022558/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022561/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022563/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022566/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22022567/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22023131/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22023157/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22023162/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22023163/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22023164/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22023270/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22023271/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: NJDOH PHEL-Virology's shared submissions

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22023347/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: NJDOH, Public Health and Environmental Laboratories

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22023348/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22023350/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22023351/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22023353/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22023354/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22023356/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22023358/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22023359/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22023360/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22023361/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22023442/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22023445/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22023446/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: NJDOH PHEL-Virology's shared submissions

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22023448/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: NJDOH, Public Health and Environmental Laboratories

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22023449/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22023451/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22023457/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22023458/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22023459/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22023460/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22023461/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22023462/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22023463/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


name: Nanopore sequencing of Lime Blue lake sediment

text: University of Miami

text: live

text: MIMS.me

text: missing

characteristic: depth

text: Sediment from a sulfidic closed-lake

characteristic: description

text: lake [ENVO:00000020]| anoxic water [ENVO:01000173]|lake sediment [ENVO:00000546]

text: lake [ENVO:00000020]|sediment [sedimentENVO:00002007]

text: lake sediment [ENVO:00000546]

text: USA: Lime Blue, WA

text: missing

text: sediment metagenome

text: 0.8 mM

characteristic: sulfide

text: Lime Blue water


name: Nanopore sequencing of Posion Lake anoxic water

text: University of Miami

text: live

text: MIMS.me

text: missing

text: Anoxic water from a sulfidic closed-lake

text: lake [ENVO:00000020]| anoxic water [ENVO:01000173]

text: lake [ENVO:00000020]| lake water [ENVO:04000007]

text: lake water [ENVO:04000007]

text: USA: Poison Lake, WA

text: 48.8174 N 119.4507 W

text: lake water metagenome

text: Poison Lake water during PSB bloom


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Shigella sonnei

text: None detected

text: Shigella sonnei

characteristic: serovar

characteristic: strain

text: Shigella sonnei serovar Shigella sonnei 1635732


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

characteristic: organism

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1635709


text: Public Health England

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Shigella flexneri

text: None detected

text: Shigella flexneri

text: Shigella flexneri serovar Shigella flexneri 1635724


text: Public Health England

text: live

text: Pathogen.env

characteristic: SRA accession

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1635707


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

characteristic: host

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1635708


characteristic: External Id

text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Shigella flexneri

text: Shigella flexneri K-218

text: Shigella flexneri

text: Shigella flexneri serovar Shigella flexneri 1635720


text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

characteristic: isolate

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

text: Salmonella enterica

characteristic: title


text: Public Health England

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Shigella sonnei

text: None detected

text: Shigella sonnei

text: Shigella sonnei serovar Shigella sonnei 1635719


text: Public Health England

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1635714


text: Public Health England

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Shigella flexneri

text: Shigella flexneri K-218

text: Shigella flexneri

text: Shigella flexneri serovar Shigella flexneri 1635723


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Shigella flexneri

text: Shigella flexneri K-218

text: Shigella flexneri

text: Shigella flexneri serovar Shigella flexneri 1635735


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Shigella sonnei

text: None detected

text: Shigella sonnei

text: Shigella sonnei serovar Shigella sonnei 1635722


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1635717


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1635733


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1635715


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Shigella flexneri

text: Shigella flexneri K-218

text: Shigella flexneri

text: Shigella flexneri serovar Shigella flexneri 1635734


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Shigella sonnei

text: None detected

text: Shigella sonnei

text: Shigella sonnei serovar Shigella sonnei 1635716


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1635710


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1635713


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Shigella flexneri

text: None detected

text: Shigella flexneri

text: Shigella flexneri serovar Shigella flexneri 1635721


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1635704


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1635711


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1635718


text: Neuroscience, University of Arizona

text: live

text: Generic

text: 15 months

characteristic: age

text: TMEM184B mutant (GT/GT)

characteristic: genotype

text: Mus musculus

text: hippocampus

text: hippocampus

characteristic: tissue

text: 15 month old TMEM184B mutant hippocampus sample 3


text: Neuroscience, University of Arizona

text: live

text: Generic

text: 15 months

text: TMEM184B mutant (GT/GT)

text: Mus musculus

text: hippocampus

text: hippocampus

text: 15 month old TMEM184B mutant hippocampus sample 2


text: Neuroscience, University of Arizona

text: live

text: Generic

text: 15 months

text: TMEM184B mutant (GT/GT)

text: Mus musculus

text: hippocampus

text: hippocampus

text: 15 month old TMEM184B mutant hippocampus sample 1


text: Neuroscience, University of Arizona

text: live

text: Generic

text: 5 months

text: TMEM184B mutant (GT/GT)

text: Mus musculus

text: hippocampus

text: hippocampus

text: 5 month old TMEM184B mutant hippocampus sample 3


text: Neuroscience, University of Arizona

text: live

text: Generic

text: 5 months

text: TMEM184B mutant (GT/GT)

text: Mus musculus

text: hippocampus

text: hippocampus

text: 5 month old TMEM184B mutant hippocampus sample 2


text: Neuroscience, University of Arizona

text: live

text: Generic

text: 5 months

text: TMEM184B mutant (GT/GT)

text: Mus musculus

text: hippocampus

text: hippocampus

text: 5 month old TMEM184B mutant hippocampus sample 1


text: Neuroscience, University of Arizona

text: live

text: Generic

text: 15 months

text: Wild Type (C57BL/6)

text: Mus musculus

text: hippocampus

text: hippocampus

text: 15 month old wild type hippocampus sample 3


text: Neuroscience, University of Arizona

text: live

text: Generic

text: 15 months

text: Wild Type (C57BL/6)

text: Mus musculus

text: hippocampus

text: hippocampus

text: 15 month old wild type hippocampus sample 2


text: Neuroscience, University of Arizona

text: live

text: Generic

text: 15 months

text: Wild Type (C57BL/6)

text: Mus musculus

text: hippocampus

text: hippocampus

text: 15 month old wild type hippocampus sample 1


text: Neuroscience, University of Arizona

text: live

text: Generic

text: 5 months

text: Wild Type (C57BL/6)

text: Mus musculus

text: hippocampus

text: hippocampus

text: 5 month old wild type hippocampus sample 4


text: Neuroscience, University of Arizona

text: live

text: Generic

text: 5 months

text: Wild Type (C57BL/6)

text: Mus musculus

text: hippocampus

text: hippocampus

text: 5 month old wild type hippocampus sample 3


text: Neuroscience, University of Arizona

text: live

text: Generic

text: 5 months

text: Wild Type (C57BL/6)

text: Mus musculus

text: hippocampus

text: hippocampus

text: 5 month old wild type hippocampus sample 2


text: Neuroscience, University of Arizona

text: live

text: Generic

text: 5 months

text: Wild Type (C57BL/6)

text: Mus musculus

text: hippocampus

text: hippocampus

text: 5 month old wild type hippocampus sample 1


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: environmental

text: Missing

text: Listeria monocytogenes

text: None detected

text: Serotype 1/2a

characteristic: serovar

characteristic: strain

text: Listeria monocytogenes serovar Serotype 1/2a 1635739


text: Public Health England

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: other

text: Missing

text: Listeria monocytogenes

characteristic: organism

text: None detected

text: Serotype 1/2a

text: Listeria monocytogenes serovar Serotype 1/2a 1635736


text: Public Health England

text: live

text: Pathogen.env

characteristic: SRA accession

text: PHE

text: United Kingdom: United Kingdom

characteristic: host

text: Not available

text: environmental

text: Missing

text: Listeria monocytogenes

text: None detected

text: Serotype 1/2a

text: Listeria monocytogenes serovar Serotype 1/2a 1635738


characteristic: External Id

text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: food

text: Missing

text: Listeria seeligeri

text: None detected

text: Novel

text: Listeria seeligeri serovar NA 1635729


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Listeria monocytogenes

text: None detected

text: Serotype 4

text: Listeria monocytogenes serovar Serotype 4 1635725

characteristic: title


text: Public Health England

characteristic: INSDC center name

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: food

text: Missing

text: Listeria monocytogenes

text: None detected

text: Serotype 4

text: Listeria monocytogenes serovar Serotype 4 1635730


text: Public Health England

characteristic: INSDC first public

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: environmental

text: Missing

text: Listeria monocytogenes

text: None detected

text: Serotype 1/2a

text: Listeria monocytogenes serovar Serotype 1/2a 1635712


text: Public Health England

characteristic: INSDC last update

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: food

text: Missing

text: Listeria monocytogenes

text: None detected

text: Serotype 4

text: Listeria monocytogenes serovar Serotype 4 1635728


text: Public Health England

text: live

characteristic: INSDC status

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: food

text: Missing

text: Listeria seeligeri

text: None detected

text: Novel

text: Listeria seeligeri serovar NA 1635727


text: Public Health England

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: food

text: Missing

text: Listeria monocytogenes

text: None detected

text: Serotype 4

text: Listeria monocytogenes serovar Serotype 4 1635726


text: Public Health England

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: food

text: Missing

text: Listeria monocytogenes

text: None detected

text: Serotype 4

text: Listeria monocytogenes serovar Serotype 4 1635731


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: environmental

text: Missing

text: Listeria monocytogenes

text: None detected

text: Serotype 1/2a

text: Listeria monocytogenes serovar Serotype 1/2a 1635737


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: environmental

text: Missing

text: Listeria monocytogenes

text: None detected

text: Serotype 1/2a

text: Listeria monocytogenes serovar Serotype 1/2a 1635740


text: UCSF

text: live

text: Pathogen.cl

text: Binh Diep

text: USA

text: Oryctolagus cuniculus

text: 12-16 weeks

text: rabbit

text: septicemia

text: death

text: septicemia

text: septicemia

text: female

text: lung

text: 37.7749 N 122.4194 W

text: Escherichia coli

text: Pathogen: secondary infection with Escherichia coli in mechanically ventilated rabbits


Huangshan hn

text: Yangtze University

text: live

text: Invertebrate

text: rice field eel

characteristic: breed

text: China:Henan,

text: not applicable

text: Monopterus albus

text: whole

text: Invertebrate sample from Monopterus albus


text: State Hygienic Laboratory at the University of Iowa

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Iowa

text: Homo sapiens

characteristic: isolate

text: clinical

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Iowa

text: Homo sapiens

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Iowa

text: Homo sapiens

text: clinical


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Illinois

text: Homo sapiens

text: clinical

text: Baseline surveillance


text: The First Affiliated Hospital of Anhui Medical University

text: live

text: Generic

text: Camk4 KO

characteristic: genotype

text: Mus musculus

text: skin

text: skin

characteristic: tissue

text: imiquimod

characteristic: treatment


characteristic: INSDC secondary accession

text: live

text: Generic

text: WT

text: Mus musculus

text: skin

text: skin

text: imiquimod


text: Medical College of Wisconsin

text: live

text: Invertebrate

text: Institut Pasteur

text: France: Paris

text: Cell Line

text: Mosquito Hemocyte 4a-3A Cell Line

text: Anopheles coluzzii

characteristic: organism

text: Cell Line


text: Medical College of Wisconsin

text: live

text: Invertebrate

characteristic: SRA accession

text: Institut Pasteur

text: France: Paris

text: Cell Line

text: Mosquito Hemocyte 4a-3B Cell Line

text: Anopheles coluzzii

text: Cell Line


text: The University of New Mexico Health Sciences Center

text: live

text: SARS-CoV-2: clinical or host-associated

text: ARTIC

text: New Mexico Department of Health Scientific Laboratory Division

text: USA: New Mexico

text: Homo sapiens

characteristic: host

text: unknown

text: not collected

text: unknown

text: missing

text: not applicable

text: Baseline surveillance

text: Center for Global Health, University of New Mexico Health Sciences Center

text: Illumina


characteristic: External Id

text: live

text: SARS-CoV-2: clinical or host-associated

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina

characteristic: title


characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: BWA

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

text: BWA

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: New Mexico Department of Health Scientific Laboratory

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: Univeristy of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-ED_02322/2022

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: DRAGEN COVID Lineage

text: Univeristy of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-ED_02390/2022

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: DRAGEN COVID Lineage

text: Univeristy of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-ED_02452/2022

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: Univeristy of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-ED_02620/2022

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: Univeristy of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-ED_02621/2022

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: Univeristy of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-ED_02632/2022

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: Univeristy of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-ED_02634/2022

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: Univeristy of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-ED_02635/2022

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: Univeristy of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-ED_02640/2022

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: Univeristy of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-ED_02641/2022

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: Univeristy of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-ED_02642/2022

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: Univeristy of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-ED_02644/2022

text: missing

text: Severe acute respiratory syndrome coronavirus 2

text: not applicable

text: Baseline surveillance

text: Illumina


text: The University of New Mexico Health Sciences Center

text: live

text: SARS-CoV-2: clinical or host-associated

text: Univeristy of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-ED_02646/2022

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: Univeristy of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-ED_02664/2022

text: missing

text: not applicable

text: Baseline surveillance

text: Center for Global Health, University of New Mexico Health Sciences Center

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: Univeristy of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-ED_02665/2022

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: Univeristy of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-ED_02671/2022

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: Univeristy of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-ED_02679/2022

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: Univeristy of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-ED_02680/2022

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: Univeristy of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-ED_02681/2022

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: Univeristy of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-ED_02684/2022

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: Univeristy of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-ED_02689/2022

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: Univeristy of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-ED_02691/2022

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: Univeristy of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-ED_02694/2022

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-EDB00157/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-EDB00158/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-EDB00159/2021

text: missing

text: Severe acute respiratory syndrome coronavirus 2

text: not applicable

text: Baseline surveillance

text: Illumina


text: The University of New Mexico Health Sciences Center

text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-EDB00160/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-EDB00161/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Center for Global Health, University of New Mexico Health Sciences Center

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-EDB00162/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-EDB00164/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-EDB00165/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-EDB00166/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-EDB00167/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-EDB00168/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-EDB00169/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-EDB00170/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-EDB00171/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-EDB00172/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-EDB00173/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-EDB00174/2021

text: missing

text: Severe acute respiratory syndrome coronavirus 2

text: not applicable

text: Baseline surveillance

text: Illumina


text: The University of New Mexico Health Sciences Center

text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-EDB00176/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-EDB00177/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Center for Global Health, University of New Mexico Health Sciences Center

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-EDB00178/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-EDB00179/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-EDB00180/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-EDB00181/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-EDB00182/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-EDB00183/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-EDB00184/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-EDB00185/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-EDB00186/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-EDB00187/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-EDL01009/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-EDL01015/2021

text: missing

text: Severe acute respiratory syndrome coronavirus 2

text: not applicable

text: Baseline surveillance

text: Illumina


text: The University of New Mexico Health Sciences Center

text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-EDL01016/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: iVar

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-EDL01017/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Center for Global Health, University of New Mexico Health Sciences Center

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_002/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_003/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_004/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_005/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_006/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_007/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_008/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_009/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_010/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_012/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_013/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_014/2021

text: missing

text: Severe acute respiratory syndrome coronavirus 2

text: not applicable

text: Baseline surveillance

text: Illumina


text: The University of New Mexico Health Sciences Center

text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_015/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_016/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Center for Global Health, University of New Mexico Health Sciences Center

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_019/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_020/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_022/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_023/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_024/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_025/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_026/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_027/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_028/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_029/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_030/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_031/2021

text: missing

text: Severe acute respiratory syndrome coronavirus 2

text: not applicable

text: Baseline surveillance

text: Illumina


text: The University of New Mexico Health Sciences Center

text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_033/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_034/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Center for Global Health, University of New Mexico Health Sciences Center

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_035/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_037/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_040/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_041/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_042/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_043/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_045/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_046/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_047/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_048/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_049/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_050/2021

text: missing

text: Severe acute respiratory syndrome coronavirus 2

text: not applicable

text: Baseline surveillance

text: Illumina


text: The University of New Mexico Health Sciences Center

text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_051/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_052/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Center for Global Health, University of New Mexico Health Sciences Center

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_053/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_054/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_055/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_056/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_057/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_058/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_060/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_061/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_062/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_063/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_065/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_068/2021

text: missing

text: Severe acute respiratory syndrome coronavirus 2

text: not applicable

text: Baseline surveillance

text: Illumina


text: The University of New Mexico Health Sciences Center

text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_069/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_070/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Center for Global Health, University of New Mexico Health Sciences Center

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_071/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_072/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_074/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_075/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_078/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_079/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_086/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_087/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_088/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_090/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_093/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_094/2021

text: missing

text: Severe acute respiratory syndrome coronavirus 2

text: not applicable

text: Baseline surveillance

text: Illumina


text: The University of New Mexico Health Sciences Center

text: live

text: SARS-CoV-2: clinical or host-associated

text: DRAGEN COVID Lineage

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL_1J2021_096/2021

text: missing

text: not applicable

text: Baseline surveillance

text: Illumina