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text: 46.169271 N 10.762510 E

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text: metagenome

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text: 46.362544 N 10.672012 E

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text: 46.362544 N 10.672012 E

characteristic: magnesium

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text: metagenome

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text: metagenome

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text: Levico Minerali Goio - Baita Anna 7

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text: 46.011358 N 11.307363 E

text: metagenome

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characteristic: External Id

text: University of trento

characteristic: INSDC center name

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text: live

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text: MIMARKS.survey

text: Rabbi Antica Fonte 7

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text: 46.401292 N 10.845006 E

characteristic: magnesium

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text: metagenome

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text: live

characteristic: NCBI submission model

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text: Italy: Trentino, Rabbi

text: 46.401292 N 10.845006 E

text: metagenome

characteristic: organism

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characteristic: External Id

text: University of trento

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text: MIMARKS.survey

text: Peio Antica Fonte 8

text: Italy: Trentino, Peio

text: 46.362544 N 10.672012 E

text: metagenome

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text: University of trento

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characteristic: NCBI submission model

text: MIMARKS.survey

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text: Peio Palon 8

text: Italy: Trentino, Peio

text: 46.362544 N 10.672012 E

characteristic: magnesium

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text: metagenome

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characteristic: potassium


characteristic: External Id

text: University of trento

characteristic: INSDC center name

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text: live

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text: MIMARKS.survey

characteristic: conduc

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text: Peio Fonte Alpina Polla Bassa 8

characteristic: description

text: Italy: Trentino, Peio

text: 46.362544 N 10.672012 E

text: metagenome

characteristic: organism

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text: University of trento

text: live

characteristic: NCBI submission model

text: MIMARKS.survey

characteristic: NCBI submission package

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text: Canazei Contrin 8

text: Italy: Trentino, Canazei

text: 46.476664 N 11.770588 E

text: metagenome

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characteristic: sulfate

characteristic: sulfide

characteristic: temp

characteristic: title


characteristic: External Id

text: University of trento

characteristic: INSDC center name

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text: live

characteristic: INSDC status

text: MIMARKS.survey

text: Canazei Cedea 8

text: Italy: Trentino, Canazei

text: 46.476664 N 11.770588 E

characteristic: magnesium

characteristic: nitrate

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text: metagenome

characteristic: ph

characteristic: potassium


text: University of trento

text: live

characteristic: NCBI submission model

text: MIMARKS.survey

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: bromide

characteristic: calcium

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characteristic: conduc

characteristic: depth

text: Levico Boze 8

characteristic: description

text: Italy: Trentino, Levico Terme

text: 46.011358 N 11.307363 E

text: metagenome

characteristic: organism

characteristic: silicate


characteristic: External Id

text: University of trento

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIMARKS.survey

text: Levico S. Antonio 8

text: Italy: Trentino, Levico Terme

text: 46.011358 N 11.307363 E

text: metagenome

characteristic: sodium

characteristic: sulfate

characteristic: sulfide

characteristic: temp

characteristic: title


text: University of trento

text: live

characteristic: NCBI submission model

text: MIMARKS.survey

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: bromide

characteristic: calcium

characteristic: chloride

text: Levico Fontanelle 8

text: Italy: Trentino, Levico Terme

text: 46.011358 N 11.307363 E

characteristic: magnesium

characteristic: nitrate

characteristic: nitrite

text: metagenome

characteristic: ph

characteristic: potassium


characteristic: External Id

text: University of trento

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIMARKS.survey

characteristic: conduc

characteristic: depth

text: Levico Minerali Rossati 8

characteristic: description

text: Italy: Trentino, Levico Terme

text: 46.011358 N 11.307363 E

text: metagenome

characteristic: organism

characteristic: silicate


text: University of trento

text: live

characteristic: NCBI submission model

text: MIMARKS.survey

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: bromide

characteristic: calcium

characteristic: chloride

text: Levico Minerali Fruet 8

text: Italy: Trentino, Levico Terme

text: 46.011358 N 11.307363 E

text: metagenome

characteristic: sodium

characteristic: sulfate

characteristic: sulfide

characteristic: temp

characteristic: title


characteristic: External Id

text: University of trento

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIMARKS.survey

text: Levico Minerali Casara 8

text: Italy: Trentino, Levico Terme

text: 46.011358 N 11.307363 E

characteristic: magnesium

characteristic: nitrate

characteristic: nitrite

text: metagenome

characteristic: ph

characteristic: potassium


text: University of trento

text: live

characteristic: NCBI submission model

text: MIMARKS.survey

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: bromide

characteristic: calcium

characteristic: chloride

characteristic: conduc

characteristic: depth

text: Levico Minerali Sgrizole 8

characteristic: description

text: Italy: Trentino, Levico Terme

text: 46.011358 N 11.307363 E

text: metagenome

characteristic: organism

characteristic: silicate


characteristic: External Id

text: University of trento

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIMARKS.survey

text: Carisolo Caderzone Pozzo 1 8

text: Italy: Trentino, Carisolo

text: 46.169271 N 10.762510 E

text: metagenome

characteristic: sodium

characteristic: sulfate

characteristic: sulfide

characteristic: temp

characteristic: title


text: University of trento

text: live

characteristic: NCBI submission model

text: MIMARKS.survey

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: bromide

characteristic: calcium

characteristic: chloride

text: Comano Terme Pozzo Hydra 1 8

text: Italy: Trentino, Stenico

text: 46.052345 N 10.854203 E

characteristic: magnesium

characteristic: nitrate

characteristic: nitrite

text: metagenome

characteristic: ph

characteristic: potassium


characteristic: External Id

text: University of trento

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIMARKS.survey

characteristic: conduc

characteristic: depth

text: Comano Terme Pozzo Hydra 2 8

characteristic: description

text: Italy: Trentino, Stenico

text: 46.052345 N 10.854203 E

text: metagenome

characteristic: organism

characteristic: silicate


text: University of trento

text: live

characteristic: NCBI submission model

text: MIMARKS.survey

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: bromide

characteristic: calcium

characteristic: chloride

text: Peio Pozzo Nuova Fonte 8

text: Italy: Trentino, Peio

text: 46.362544 N 10.672012 E

text: metagenome

characteristic: sodium

characteristic: sulfate

characteristic: sulfide

characteristic: temp

characteristic: title


characteristic: External Id

text: University of trento

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIMARKS.survey

text: Pozza di Fassa Pucia 8

text: Italy: Trentino, Sen Jan di Fassa

text: 46.429508 N 11.688393 E

characteristic: magnesium

characteristic: nitrate

characteristic: nitrite

text: metagenome

characteristic: ph

characteristic: potassium


text: University of trento

text: live

characteristic: NCBI submission model

text: MIMARKS.survey

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: bromide

characteristic: calcium

characteristic: chloride

characteristic: conduc

characteristic: depth

text: Rabbi Pozzo Nuova Fonte 8

characteristic: description

text: Italy: Trentino, Rabbi

text: 46.401292 N 10.845006 E

text: metagenome

characteristic: organism

characteristic: silicate


characteristic: External Id

text: University of trento

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIMARKS.survey

text: Levico Pozzo Palazzo Delle Terme 8

text: Italy: Trentino, Levico Terme

text: 46.011358 N 11.307363 E

text: metagenome

characteristic: sodium

characteristic: sulfate

characteristic: sulfide

characteristic: temp

characteristic: title


text: University of trento

text: live

characteristic: NCBI submission model

text: MIMARKS.survey

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: bromide

characteristic: calcium

characteristic: chloride

text: Caderzone Acquaforte S. Antonio 8

text: Italy: Trentino, Caderzone

text: 46.129016 N 10.756109 E

characteristic: magnesium

characteristic: nitrate

characteristic: nitrite

text: metagenome

characteristic: ph

characteristic: potassium


characteristic: External Id

text: University of trento

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIMARKS.survey

characteristic: conduc

characteristic: depth

text: Comano Terme Sajant Bassa 8

characteristic: description

text: Italy: Trentino, Fiave

text: 46.004780 N 10.842138 E

text: metagenome

characteristic: organism

characteristic: silicate


text: University of trento

text: live

characteristic: NCBI submission model

text: MIMARKS.survey

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: bromide

characteristic: calcium

characteristic: chloride

text: Caderzone Prato Val 8

text: Italy: Trentino, Caderzone

text: 46.129016 N 10.756109 E

text: metagenome

characteristic: sodium

characteristic: sulfate

characteristic: sulfide

characteristic: temp

characteristic: title


characteristic: External Id

text: University of trento

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIMARKS.survey

text: Carisolo Pra Dell Era 8

text: Italy: Trentino, Carisolo

text: 46.169271 N 10.762510 E

characteristic: magnesium

characteristic: nitrate

characteristic: nitrite

text: metagenome

characteristic: ph

characteristic: potassium


text: University of trento

text: live

characteristic: NCBI submission model

text: MIMARKS.survey

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: bromide

characteristic: calcium

characteristic: chloride

characteristic: conduc

characteristic: depth

text: Pozza di Fassa Fraine De Soyal Dx 8

characteristic: description

text: Italy: Trentino, Sen Jan di Fassa

text: 46.429508 N 11.688393 E

text: metagenome

characteristic: organism

characteristic: silicate


characteristic: External Id

text: University of trento

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIMARKS.survey

text: Canazei La Perla 8

text: Italy: Trentino, Canazei

text: 46.476664 N 11.770588 E

text: metagenome

characteristic: sodium

characteristic: sulfate

characteristic: sulfide

characteristic: temp

characteristic: title


text: University of trento

text: live

characteristic: NCBI submission model

text: MIMARKS.survey

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: bromide

characteristic: calcium

characteristic: chloride

text: Pozza di Fassa Alloch 8

text: Italy: Trentino, Sen Jan di Fassa

text: 46.429508 N 11.688393 E

characteristic: magnesium

characteristic: nitrate

characteristic: nitrite

text: metagenome

characteristic: ph

characteristic: potassium


characteristic: External Id

text: University of trento

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIMARKS.survey

characteristic: conduc

characteristic: depth

text: Peio Fonte Alpina 8

characteristic: description

text: Italy: Trentino, Peio

text: 46.362544 N 10.672012 E

text: metagenome

characteristic: organism

characteristic: silicate


text: University of trento

text: live

characteristic: NCBI submission model

text: MIMARKS.survey

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: bromide

characteristic: calcium

characteristic: chloride

text: Peio Mezzoli 8

text: Italy: Trentino, Peio

text: 46.362544 N 10.672012 E

text: metagenome

characteristic: sodium

characteristic: sulfate

characteristic: sulfide

characteristic: temp

characteristic: title


characteristic: External Id

text: University of trento

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIMARKS.survey

text: Comano Terme Antica Fonte 8

text: Italy: Trentino, Comano Terme

text: 46.041400 N 10.881230 E

characteristic: magnesium

characteristic: nitrate

characteristic: nitrite

text: metagenome

characteristic: ph

characteristic: potassium


text: University of trento

text: live

characteristic: NCBI submission model

text: MIMARKS.survey

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: bromide

characteristic: calcium

characteristic: chloride

characteristic: conduc

characteristic: depth

text: Levico Minerali Goio - Baita Anna 8

characteristic: description

text: Italy: Trentino, Levico Terme

text: 46.011358 N 11.307363 E

text: metagenome

characteristic: organism

characteristic: silicate


characteristic: External Id

text: University of trento

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIMARKS.survey

text: Rabbi Antica Fonte 8

text: Italy: Trentino, Rabbi

text: 46.401292 N 10.845006 E

text: metagenome

characteristic: sodium

characteristic: sulfate

characteristic: sulfide

characteristic: temp

characteristic: title


text: University of trento

text: live

characteristic: NCBI submission model

text: MIMARKS.survey

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: bromide

characteristic: calcium

characteristic: chloride

text: Rabbi Tremenesca Bassa 8

text: Italy: Trentino, Rabbi

text: 46.401292 N 10.845006 E

characteristic: magnesium

characteristic: nitrate

characteristic: nitrite

text: metagenome

characteristic: ph

characteristic: potassium


characteristic: External Id

text: All-Russia Research Institute of Agricultural Microbiology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: Russia:Saint-Petersburg

text: soil

text: 59.821069 N 30.321760 E

text: Ashan

characteristic: location

text: soil metagenome

characteristic: organism

characteristic: replicate


text: live

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Russia:Saint-Petersburg

text: soil

text: 59.821069 N 30.321760 E

text: Middle

text: soil metagenome

characteristic: title


text: live

text: Metagenome or environmental

text: Russia:Saint-Petersburg

text: soil

text: 59.821069 N 30.321760 E

text: soil metagenome


text: Europejskie Regionalne Centrum Ekohydrology

text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Presummer season, attached bacteria fraction, sample 1

characteristic: description

text: Particle-attaced bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: Surface water bloom concentrated with phytoplankton net

text: DNA isolation and purification after commercial kit, 16s rRNA region V3-V4 genomic libraries, metagenomic analysis using Illumina Miniseq Platform.

text: 5 L concentrated to 30 mL sample

text: presummer

characteristic: season

text: Presummer bloom - Attached bacterial fraction - sample 1


text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Presummer season, attached bacteria fraction, sample 2

text: Particle-attaced bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: 5 L concentrated to 30 mL sample

text: presummer

text: Presummer bloom - Attached bacterial fraction - sample 2


text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Presummer season, attached bacteria fraction, sample 3

text: Particle-attaced bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: 5 L concentrated to 30 mL sample

text: presummer

text: Presummer bloom - Attached bacterial fraction - sample 3


text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Presummer season, attached bacteria fraction, sample 4

text: Particle-attaced bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: 5 L concentrated to 30 mL sample

text: presummer

text: Presummer bloom - Attached bacterial fraction - sample 4


text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Presummer season, attached bacteria fraction, sample 5

text: Particle-attaced bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: 5 L concentrated to 30 mL sample

text: presummer

text: Presummer bloom - Attached bacterial fraction - sample 5


text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Presummer season, attached bacteria fraction, sample 6

text: Particle-attaced bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: 5 L concentrated to 30 mL sample

text: presummer

text: Presummer bloom - Attached bacterial fraction - sample 6


text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Presummer season, attached bacteria fraction, sample 7

text: Particle-attaced bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: 5 L concentrated to 30 mL sample

text: presummer

text: Presummer bloom - Attached bacterial fraction - sample 7


text: Europejskie Regionalne Centrum Ekohydrology

text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Presummer season, free-living bacteria fraction, sample 1

text: Free-living bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: 5 L concentrated to 30 mL sample

text: presummer

text: Presummer bloom - Free-living bacterial fraction - sample 1


text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Presummer season, free-living bacteria fraction, sample 2

text: Free-living bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: Surface water bloom concentrated with phytoplankton net

text: DNA isolation and purification after commercial kit, 16s rRNA region V3-V4 genomic libraries, metagenomic analysis using Illumina Miniseq Platform.

text: 5 L concentrated to 30 mL sample

text: presummer

text: Presummer bloom - Free-living bacterial fraction - sample 2


text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Presummer season, free-living bacteria fraction, sample 3

text: Free-living bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: 5 L concentrated to 30 mL sample

text: presummer

text: Presummer bloom - Free-living bacterial fraction - sample 3


text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Presummer season, free-living bacteria fraction, sample 4

text: Free-living bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: 5 L concentrated to 30 mL sample

text: presummer

text: Presummer bloom - Free-living bacterial fraction - sample 4


text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Presummer season, free-living bacteria fraction, sample 5

text: Free-living bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: 5 L concentrated to 30 mL sample

text: presummer

text: Presummer bloom - Free-living bacterial fraction - sample 5


text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Presummer season, free-living bacteria fraction, sample 6

text: Free-living bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: 5 L concentrated to 30 mL sample

text: presummer

text: Presummer bloom - Free-living bacterial fraction - sample 6


text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Presummer season, free-living bacteria fraction, sample 7

text: Free-living bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: 5 L concentrated to 30 mL sample

text: presummer

text: Presummer bloom - Free-living bacterial fraction - sample 7


text: Europejskie Regionalne Centrum Ekohydrology

text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Midsummer season, attached bacteria fraction, sample 1

text: Particle-attaced bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: 5 L concentrated to 30 mL sample

text: midsummer

text: Midsummer bloom - Attached bacterial fraction - sample 1


text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Midsummer season, attached bacteria fraction, sample 2

text: Particle-attaced bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: 5 L concentrated to 30 mL sample

text: midsummer

text: Midsummer bloom - Attached bacterial fraction - sample 2


text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Midsummer season, attached bacteria fraction, sample 3

text: Particle-attaced bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: Surface water bloom concentrated with phytoplankton net

text: DNA isolation and purification after commercial kit, 16s rRNA region V3-V4 genomic libraries, metagenomic analysis using Illumina Miniseq Platform.

text: 5 L concentrated to 30 mL sample

text: midsummer

text: Midsummer bloom - Attached bacterial fraction - sample 3


text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Midsummer season, attached bacteria fraction, sample 4

text: Particle-attaced bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: 5 L concentrated to 30 mL sample

text: midsummer

text: Midsummer bloom - Attached bacterial fraction - sample 4


text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Midsummer season, attached bacteria fraction, sample 5

text: Particle-attaced bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: 5 L concentrated to 30 mL sample

text: midsummer

text: Midsummer bloom - Attached bacterial fraction - sample 5


text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Midsummer season, attached bacteria fraction, sample 6

text: Particle-attaced bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: 5 L concentrated to 30 mL sample

text: midsummer

text: Midsummer bloom - Attached bacterial fraction - sample 6


text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Midsummer season, attached bacteria fraction, sample 7

text: Particle-attaced bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: 5 L concentrated to 30 mL sample

text: midsummer

text: Midsummer bloom - Attached bacterial fraction - sample 7


text: Europejskie Regionalne Centrum Ekohydrology

text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Midsummer season, free-living bacteria fraction, sample 1

text: Free-living bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: 5 L concentrated to 30 mL sample

text: midsummer

text: Midsummer bloom - Free-living bacterial fraction - sample 1


text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Midsummer season, free-living bacteria fraction, sample 2

text: Free-living bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: 5 L concentrated to 30 mL sample

text: midsummer

text: Midsummer bloom - Free-living bacterial fraction - sample 2


text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Midsummer season, free-living bacteria fraction, sample 3

text: Free-living bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: 5 L concentrated to 30 mL sample

text: midsummer

text: Midsummer bloom - Free-living bacterial fraction - sample 3


text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Midsummer season, free-living bacteria fraction, sample 4

text: Free-living bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: Surface water bloom concentrated with phytoplankton net

text: DNA isolation and purification after commercial kit, 16s rRNA region V3-V4 genomic libraries, metagenomic analysis using Illumina Miniseq Platform.

text: 5 L concentrated to 30 mL sample

text: midsummer

text: Midsummer bloom - Free-living bacterial fraction - sample 4


text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Midsummer season, free-living bacteria fraction, sample 5

text: Free-living bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: 5 L concentrated to 30 mL sample

text: midsummer

text: Midsummer bloom - Free-living bacterial fraction - sample 5


text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Postsummer season, attached bacteria fraction, sample 1

text: Particle-attaced bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: 5 L concentrated to 30 mL sample

text: postsummer

text: Postsummer bloom - Attached bacterial fraction - sample 1


text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Postsummer season, attached bacteria fraction, sample 2

text: Particle-attaced bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: 5 L concentrated to 30 mL sample

text: postsummer

text: Postsummer bloom - Attached bacterial fraction - sample 2


text: Europejskie Regionalne Centrum Ekohydrology

text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Postsummer season, attached bacteria fraction, sample 3

text: Particle-attaced bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: 5 L concentrated to 30 mL sample

text: postsummer

text: Postsummer bloom - Attached bacterial fraction - sample 3


text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Postsummer season, attached bacteria fraction, sample 4

text: Particle-attaced bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: 5 L concentrated to 30 mL sample

text: postsummer

text: Postsummer bloom - Attached bacterial fraction - sample 4


text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Postsummer season, attached bacteria fraction, sample 5

text: Particle-attaced bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: 5 L concentrated to 30 mL sample

text: postsummer

text: Postsummer bloom - Attached bacterial fraction - sample 5


text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Postsummer season, attached bacteria fraction, sample 6

text: Particle-attaced bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: 5 L concentrated to 30 mL sample

text: postsummer

text: Postsummer bloom - Attached bacterial fraction - sample 6


text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Postsummer season, attached bacteria fraction, sample 7

text: Particle-attaced bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: Surface water bloom concentrated with phytoplankton net

text: DNA isolation and purification after commercial kit, 16s rRNA region V3-V4 genomic libraries, metagenomic analysis using Illumina Miniseq Platform.

text: 5 L concentrated to 30 mL sample

text: postsummer

text: Postsummer bloom - Attached bacterial fraction - sample 7


text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Postsummer season, free-living bacteria fraction, sample 1

text: Free-living bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: 5 L concentrated to 30 mL sample

text: postsummer

text: Postsummer bloom - Free-living bacterial fraction - sample 1


text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Postsummer season, free-living bacteria fraction, sample 2

text: Free-living bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: 5 L concentrated to 30 mL sample

text: postsummer

text: Postsummer bloom - Free-living bacterial fraction - sample 2


text: Europejskie Regionalne Centrum Ekohydrology

text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Postsummer season, free-living bacteria fraction, sample 3

text: Free-living bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: 5 L concentrated to 30 mL sample

text: postsummer

text: Postsummer bloom - Free-living bacterial fraction - sample 3


text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Postsummer season, free-living bacteria fraction, sample 4

text: Free-living bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: 5 L concentrated to 30 mL sample

text: postsummer

text: Postsummer bloom - Free-living bacterial fraction - sample 4


text: live

text: Metagenome or environmental

text: 16s rRNA sequences, bacterial communities in Sulejów Lake bloom, Postsummer season, free-living bacteria fraction, sample 5

text: Free-living bacteria

text: Poland: Sulejow

text: surface water

text: 51.47 N 19.83 E

text: lake water metagenome

text: 5 L concentrated to 30 mL sample

text: postsummer

text: Postsummer bloom - Free-living bacterial fraction - sample 5


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Milwaukee County

text: Homo sapiens

characteristic: host

characteristic: isolate

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


characteristic: External Id

text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Jefferson County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Winnebago County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Pepin County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Polk County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Dodge County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Marquette County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wadsworth Center - NYS DOH

text: live

text: MLST1142 Pasteur

characteristic: MLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: sputum

text: Acinetobacter baumannii

text: whole organism

characteristic: strain

text: Microbe sample from Acinetobacter baumannii


text: Wadsworth Center - NYS DOH

text: live

text: MLST632 Pasteur

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: wound

text: Acinetobacter baumannii

characteristic: organism

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

text: MLST499 Pasteur

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: USA

text: Homo sapiens

text: wound

text: Acinetobacter baumannii

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

text: MLST499 Pasteur

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: USA

text: Homo sapiens

text: tracheal aspirate

text: Acinetobacter baumannii

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

text: MLST270 PubMLST

text: Microbe, viral or environmental

characteristic: SRA accession

text: USA

text: Homo sapiens

text: urine

text: Enterobacter hormaechei

text: whole organism

text: Microbe sample from Enterobacter hormaechei


text: Wadsworth Center - NYS DOH

text: live

text: MLST2 Pasteur

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: urine

text: Acinetobacter baumannii

text: whole organism

characteristic: title


text: Wadsworth Center - NYS DOH

text: live

text: MLST171 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: urine

text: Enterobacter hormaechei

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

text: MLST2 Pasteur

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: abdominal wall

text: Acinetobacter baumannii

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

text: MLST410 Achtman

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: urine

text: Escherichia coli

text: whole organism

text: Microbe sample from Escherichia coli


text: Wadsworth Center - NYS DOH

text: live

text: MLST167 Achtman

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: other

text: Escherichia coli

text: whole organism

text: Microbe sample from Escherichia coli


text: Wadsworth Center - NYS DOH

text: live

text: MLST617 Achtman

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: urine

text: Escherichia coli

text: whole organism

text: Microbe sample from Escherichia coli


text: Wadsworth Center - NYS DOH

text: live

text: MLST2 Pasteur

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: sputum

text: Acinetobacter baumannii

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

text: MLST2 Pasteur

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: ulcer isolate

text: Acinetobacter baumannii

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

text: MLST395 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: urine

text: Klebsiella pneumoniae

text: whole organism

text: Microbe sample from Klebsiella pneumoniae


text: Wadsworth Center - NYS DOH

text: live

text: MLST54 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: rectal swab isolate

text: Klebsiella pneumoniae

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

text: MLST147 PubMLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: blood

text: Klebsiella pneumoniae

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

text: MLST2 Pasteur

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: other isolate

text: Acinetobacter baumannii

text: whole organism


text: Wadsworth Center - NYS DOH

text: live

text: MLST499 Pasteur

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: other isolate

text: Acinetobacter baumannii

text: whole organism


text: Northwestern University Feinberg School of Medicine

text: live

text: Pathogen.cl

text: unknown

text: USA:Chicago

text: Homo sapiens

text: Pneumonia

text: BAL

text: unknown

text: Pseudomonas aeruginosa

text: Pathogen: clinical or host-associated sample from Pseudomonas aeruginosa


text: Indiana Department of Health Laboratories

text: live

text: SARS-CoV-2: wastewater surveillance

text: FDA Center for Food Safety and Applied Nutrition

text: MOB

text: ceres nanotrap

text: BCoV

text: promega ht tna kit

text: USA: Alabama

text: wastewater

text: wastewater metagenome

text: GenomeTrakr; LFFM ww project

text: public health surveillance community-level

text: Indiana State Department of Health

text: Samples stored at -70C until thawed at 4C. After sample thawed completely, 10 ml sample concentrated on KingFisher 24 deep well plates and then extracted on KingFisher 96 deep well plate. Extract quantified on QIAcuity dPCR instrument. Extract also provided to molecular group for sequencing.

text: SARS-CoV-2: wastewater surveillance

text: PMMoV

text: GT-Digital SARS-CoV-2 Wastewater Surveillance Assay For QIAcuity dPCR

text: copies/L

text: utilities billing records

text: stored at -70C until thawed at 4C

text: raw wastewater

text: wastewater treatment plant

text: grab

text: IN

text: copies/L

text: N gene (N1)

text: yes

text: copies/L

text: N gene (N2)


text: live

text: SARS-CoV-2: wastewater surveillance

text: PAS

text: ceres nanotrap

text: BCoV

text: promega ht tna kit

text: USA: Mississippi

text: wastewater

text: wastewater metagenome

text: GenomeTrakr; LFFM ww project

text: Indiana State Department of Health

text: SARS-CoV-2: wastewater surveillance

text: PMMoV

text: copies/L

text: utilities billing records

text: stored at -70C until thawed at 4C

text: raw wastewater

text: wastewater treatment plant

text: grab

text: IN

text: copies/L

text: N gene (N1)

text: yes

text: copies/L

text: N gene (N2)


text: live

text: SARS-CoV-2: wastewater surveillance

text: PAS

text: ceres nanotrap

text: Note: Sample bottle cracked after removal from -70C storage and was thawed into another container

characteristic: description

text: BCoV

text: promega ht tna kit

text: USA: Mississippi

text: wastewater

text: wastewater metagenome

text: GenomeTrakr; LFFM ww project

text: Indiana State Department of Health

text: SARS-CoV-2: wastewater surveillance

text: PMMoV

text: copies/L

text: utilities billing records

text: stored at -70C until thawed at 4C

text: raw wastewater

text: wastewater treatment plant

text: grab

text: IN

text: copies/L

text: N gene (N1)

text: yes

text: copies/L

text: N gene (N2)


90 A1

text: Swedish University of Agricultural Sciences

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: A

text: 57.42 N 11.58 E

text: rat gut metagenome

text: MIMARKS Survey related sample from rat gut metagenome


91 A2

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: A

text: 57.42 N 11.58 E

text: rat gut metagenome


92 A3

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: A

text: 57.42 N 11.58 E

text: rat gut metagenome


93 A4

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: A

text: 57.42 N 11.58 E

text: rat gut metagenome


94 A5

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: A

text: 57.42 N 11.58 E

text: rat gut metagenome


95 A6

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: A

text: 57.42 N 11.58 E

text: rat gut metagenome


96 B1

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: B

text: 57.42 N 11.58 E

text: rat gut metagenome


97 B2

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: B

text: 57.42 N 11.58 E

text: rat gut metagenome


98 B3

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: B

text: 57.42 N 11.58 E

text: rat gut metagenome


99 B4

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: B

text: 57.42 N 11.58 E

text: rat gut metagenome


100 B5

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: B

text: 57.42 N 11.58 E

text: rat gut metagenome


101 B6

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: B

text: 57.42 N 11.58 E

text: rat gut metagenome


102 C1

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: C

text: 57.42 N 11.58 E

text: rat gut metagenome


103 C2

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: C

text: 57.42 N 11.58 E

text: rat gut metagenome


104 C3

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: C

text: 57.42 N 11.58 E

text: rat gut metagenome


105 C4

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: C

text: 57.42 N 11.58 E

text: rat gut metagenome


106 C5

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: C

text: 57.42 N 11.58 E

text: rat gut metagenome


107 C6

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: C

text: 57.42 N 11.58 E

text: rat gut metagenome


108 D1

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: D

text: 57.42 N 11.58 E

text: rat gut metagenome


109 D2

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: D

text: 57.42 N 11.58 E

text: rat gut metagenome


110 D3

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: D

text: 57.42 N 11.58 E

text: rat gut metagenome


111 D4

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: D

text: 57.42 N 11.58 E

text: rat gut metagenome


112 D5

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: D

text: 57.42 N 11.58 E

text: rat gut metagenome


113 D6

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: D

text: 57.42 N 11.58 E

text: rat gut metagenome


114 E1

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: E

text: 57.42 N 11.58 E

text: rat gut metagenome


115 E2

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: E

text: 57.42 N 11.58 E

text: rat gut metagenome


116 E3

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: E

text: 57.42 N 11.58 E

text: rat gut metagenome


117 E4

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: E

text: 57.42 N 11.58 E

text: rat gut metagenome


118 E5

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: E

text: 57.42 N 11.58 E

text: rat gut metagenome


119 E6

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: E

text: 57.42 N 11.58 E

text: rat gut metagenome


120 F1

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: F

text: 57.42 N 11.58 E

text: rat gut metagenome


121 F2

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: F

text: 57.42 N 11.58 E

text: rat gut metagenome


122 F3

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: F

text: 57.42 N 11.58 E

text: rat gut metagenome


123 F4

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: F

text: 57.42 N 11.58 E

text: rat gut metagenome


124 F5

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: F

text: 57.42 N 11.58 E

text: rat gut metagenome


125 F6

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: F

text: 57.42 N 11.58 E

text: rat gut metagenome


126 G1

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: G

text: 57.42 N 11.58 E

text: rat gut metagenome


127 G2

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: G

text: 57.42 N 11.58 E

text: rat gut metagenome


128 G3

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: G

text: 57.42 N 11.58 E

text: rat gut metagenome


129 G4

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: G

text: 57.42 N 11.58 E

text: rat gut metagenome


130 G5

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: G

text: 57.42 N 11.58 E

text: rat gut metagenome


131 G6

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: G

text: 57.42 N 11.58 E

text: rat gut metagenome


132 H1

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: H

text: 57.42 N 11.58 E

text: rat gut metagenome


133 H2

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: H

text: 57.42 N 11.58 E

text: rat gut metagenome


134 H3

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: H

text: 57.42 N 11.58 E

text: rat gut metagenome


135 H4

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: H

text: 57.42 N 11.58 E

text: rat gut metagenome


136 H5

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: H

text: 57.42 N 11.58 E

text: rat gut metagenome


137 H6

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: H

text: 57.42 N 11.58 E

text: rat gut metagenome


138 I1

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: I

text: 57.42 N 11.58 E

text: rat gut metagenome


139 I3

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: I

text: 57.42 N 11.58 E

text: rat gut metagenome


141 I5

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: I

text: 57.42 N 11.58 E

text: rat gut metagenome


142 I6

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: I

text: 57.42 N 11.58 E

text: rat gut metagenome


143 J1

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: J

text: 57.42 N 11.58 E

text: rat gut metagenome


144 J2

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: J

text: 57.42 N 11.58 E

text: rat gut metagenome


145 J3

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: J

text: 57.42 N 11.58 E

text: rat gut metagenome


146 J4

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: J

text: 57.42 N 11.58 E

text: rat gut metagenome


147 J5

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: J

text: 57.42 N 11.58 E

text: rat gut metagenome


148 J6

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: J

text: 57.42 N 11.58 E

text: rat gut metagenome


149 K1

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: K

text: 57.42 N 11.58 E

text: rat gut metagenome


150 K2

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: K

text: 57.42 N 11.58 E

text: rat gut metagenome


151 K3

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: K

text: 57.42 N 11.58 E

text: rat gut metagenome


152 K4

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: K

text: 57.42 N 11.58 E

text: rat gut metagenome


153 K5

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: K

text: 57.42 N 11.58 E

text: rat gut metagenome


154 K6

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: K

text: 57.42 N 11.58 E

text: rat gut metagenome


155 L1

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: L

text: 57.42 N 11.58 E

text: rat gut metagenome


156 L2

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: L

text: 57.42 N 11.58 E

text: rat gut metagenome


157 L3

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: L

text: 57.42 N 11.58 E

text: rat gut metagenome


158 L4

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: L

text: 57.42 N 11.58 E

text: rat gut metagenome


159 L5

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: L

text: 57.42 N 11.58 E

text: rat gut metagenome


160 L6

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: L

text: 57.42 N 11.58 E

text: rat gut metagenome


161 M1

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: M

text: 57.42 N 11.58 E

text: rat gut metagenome


162 M2

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: M

text: 57.42 N 11.58 E

text: rat gut metagenome


163 M3

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: M

text: 57.42 N 11.58 E

text: rat gut metagenome


164 M4

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: M

text: 57.42 N 11.58 E

text: rat gut metagenome


165 M5

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: M

text: 57.42 N 11.58 E

text: rat gut metagenome


166 M6

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: M

text: 57.42 N 11.58 E

text: rat gut metagenome


167 N1

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: N

text: 57.42 N 11.58 E

text: rat gut metagenome


168 N2

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: N

text: 57.42 N 11.58 E

text: rat gut metagenome


169 N3

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: N

text: 57.42 N 11.58 E

text: rat gut metagenome


170 N4

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: N

text: 57.42 N 11.58 E

text: rat gut metagenome


171 N5

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: N

text: 57.42 N 11.58 E

text: rat gut metagenome


172 N6

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: N

text: 57.42 N 11.58 E

text: rat gut metagenome


173 O1

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: O

text: 57.42 N 11.58 E

text: rat gut metagenome


174 O2

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: O

text: 57.42 N 11.58 E

text: rat gut metagenome


175 O3

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: O

text: 57.42 N 11.58 E

text: rat gut metagenome


176 O4

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: O

text: 57.42 N 11.58 E

text: rat gut metagenome


177 O5

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: O

text: 57.42 N 11.58 E

text: rat gut metagenome


178 O6

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Colon

text: Microbiota

text: Colon content

text: Sweden

text: Rattus

text: O

text: 57.42 N 11.58 E

text: rat gut metagenome


text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Stool

text: Microbiota

text: Feces

text: Sweden

text: Rattus

text: C

text: 57.42 N 11.58 E

text: rat gut metagenome


text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Stool

text: Microbiota

text: Feces

text: Sweden

text: Rattus

text: E

text: 57.42 N 11.58 E

text: rat gut metagenome


text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Stool

text: Microbiota

text: Feces

text: Sweden

text: Rattus

text: G

text: 57.42 N 11.58 E

text: rat gut metagenome


text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Stool

text: Microbiota

text: Feces

text: Sweden

text: Rattus

text: I

text: 57.42 N 11.58 E

text: rat gut metagenome


text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Stool

text: Microbiota

text: Feces

text: Sweden

text: Rattus

text: K

text: 57.42 N 11.58 E

text: rat gut metagenome


text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Stool

text: Microbiota

text: Feces

text: Sweden

text: Rattus

text: M

text: 57.42 N 11.58 E

text: rat gut metagenome


text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Stool

text: Microbiota

text: Feces

text: Sweden

text: Rattus

text: O

text: 57.42 N 11.58 E

text: rat gut metagenome


text: Agriculture and Agri-Food Canada

text: live

text: Microbe, viral or environmental

text: Canada: Saskatoon

text: Brassica napus

text: influorescenceH

text: Candidatus Phytoplasma asteris

text: tissue sample


text: Agriculture and Agri-Food Canada

text: live

text: Microbe, viral or environmental

text: Canada: Saskatoon

text: Brassica napus

text: influorescenceM

text: Candidatus Phytoplasma asteris

text: tissue sample


text: Agriculture and Agri-Food Canada

text: live

text: Microbe, viral or environmental

text: Canada: Saskatoon

text: Brassica napus

text: influorescenceL

text: Candidatus Phytoplasma asteris

text: tissue sample


text: Agriculture and Agri-Food Canada

text: live

text: Microbe, viral or environmental

text: Canada: Saskatoon

text: Brassica napus

text: influorescenceVL

text: Candidatus Phytoplasma asteris

text: tissue sample

text: AY-spiked_B.napus-very low


text: Agriculture and Agri-Food Canada

text: live

text: Microbe, viral or environmental

text: Canada: Saskatoon

text: Brassica napus

text: leaf

text: Candidatus Phytoplasma asteris

text: tissue sample

text: B. napus strain BR1


text: Agriculture and Agri-Food Canada

text: live

text: Microbe, viral or environmental

text: Canada: Quebec

text: Fragaria x ananassa

text: leaf

text: Candidatus Phytoplasma asteris

text: tissue sample

text: infected strawberry QC


text: Agriculture and Agri-Food Canada

text: live

text: Microbe, viral or environmental

text: Mexico: Jalisco

text: Fragaria x ananassa

text: Candidatus Phytoplasma asteris

text: tissue sample

text: infected strawberry Mexico7


text: Agriculture and Agri-Food Canada

text: live

text: Microbe, viral or environmental

text: Mexico: Jalisco

text: Fragaria x ananassa

text: Candidatus Phytoplasma asteris

text: tissue sample

text: infected strawberry Mexico41


text: Agriculture and Agri-Food Canada

text: live

text: Microbe, viral or environmental

text: Canada: British Columbia

text: Prunus domestica

text: leaf

text: Candidatus Phytoplasma prunorum

text: tissue sample

text: ESFY


text: Agriculture and Agri-Food Canada

text: live

text: Microbe, viral or environmental

text: Canada: British Columbia

text: Malus domestica

text: leaf

text: Candidatus Phytoplasma mali

text: tissue sample

text: AP


text: Agriculture and Agri-Food Canada

text: live

text: Microbe, viral or environmental

text: Canada: British Columbia

text: Pyrus communis

text: leaf

text: Candidatus Phytoplasma pyri

text: tissue sample

text: PD


text: Agriculture and Agri-Food Canada

text: live

text: Microbe, viral or environmental

text: Canada: British Columbia

text: Prunus persica

text: leaf

text: Candidatus Phytoplasma pyri

text: tissue sample

text: PYLR


text: Agriculture and Agri-Food Canada

text: live

text: Microbe, viral or environmental

text: Canada: British Columbia

text: Syringa

text: leaf

text: Candidatus Phytoplasma pruni

text: tissue sample

text: lilac-pruni


text: Agriculture and Agri-Food Canada

text: live

text: Microbe, viral or environmental

text: Canada: British Columbia

text: Prunus avium

text: leaf

text: Candidatus Phytoplasma pruni

text: tissue sample

text: pruni


text: Agriculture and Agri-Food Canada

text: live

text: Microbe, viral or environmental

text: Canada: British Columbia

text: Vitis vinifera

text: leaf

text: Candidatus Phytoplasma solani

text: tissue sample

text: grape-solani


uninfected grape

text: Agriculture and Agri-Food Canada

text: live

text: Microbe, viral or environmental

text: Canada: British Columbia

text: Vitis vinifera

text: leaf

text: Candidatus Phytoplasma solani

text: tissue sample

text: grape-uninfected


uninfected canola

text: Agriculture and Agri-Food Canada

text: live

text: Microbe, viral or environmental

text: Canada: Saskatoon

text: Brassica napus

text: seedling

text: Candidatus Phytoplasma asteris

text: tissue sample

text: canola-uninfected


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Pepin County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Winnebago County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Jefferson County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Dodge County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Bayfield County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Bacteria

characteristic: Domain

text: University of Florida

text: live

text: Commercial citrus orchard in Southwest Florida

characteristic: Location

text: Metagenome or environmental

characteristic: Replicate

characteristic: Rootstock

text: Compost

characteristic: Treatment

text: Rhizosphere soil

characteristic: environmental medium

text: USA:FL,LaBelle

text: Citrus

text: 26.65 N 81.50 W

text: rhizosphere metagenome

text: Metagenome or environmental sample from rhizosphere metagenome


text: Bacteria

characteristic: External Id

text: University of Florida

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: No compost

text: Rhizosphere soil

text: USA:FL,LaBelle

text: Citrus

characteristic: host

text: 26.65 N 81.50 W

text: rhizosphere metagenome


text: University of Geneva

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: 60 days old

characteristic: Stage

text: Homo sapiens

characteristic: organism

text: cyclopamine A 1:500

characteristic: patterning protocol

text: Dorsal E370k COs Day 60

text: Dorsal E370k COs

characteristic: tissue

text: Dorsal E370k COs Day 60


text: University of Geneva

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: 60 days old

text: Homo sapiens

text: cyclopamine A 1:500

text: Dorsal Control COs Day 60

text: Dorsal Control COs

text: Dorsal Control COs Day 60

characteristic: title


text: University of Geneva

text: live

text: Generic

text: 60 days old

text: Homo sapiens

text: SAG 1:10,000 + IWP-2 1:2,000

text: Ventral Control/E370K Mosaic organoids

text: Ventral Control/E370K Mosaic organoids d60 [mut20]


text: University of Geneva

text: live

text: Generic

text: 60 days old

text: Homo sapiens

text: SAG 1:10,000 + IWP-2 1:2,000

text: Ventral Control/E370K Mosaic organoids

text: Ventral Control/E370K Mosaic organoids d60 [ctrl80]


text: University of Geneva

text: live

text: Generic

text: 60 days old

text: Homo sapiens

text: SAG 1:10,000 + IWP-2 1:2,000

text: Ventral E370k COs Day 60

text: Ventral E370k COs

text: Ventral E370k COs Day 60


text: University of Geneva

text: live

text: Generic

text: 60 days old

text: Homo sapiens

text: SAG 1:10,000 + IWP-2 1:2,000

text: Ventral Control COs Day 60

text: Ventral Control COs

text: Ventral Control COs Day 60


text: Faculty of pharmacy, University of Tours

text: live

text: Generic

text: Caenorhabditis elegans

text: whole organism

text: whole organism

text: Probiotic curative treatment (biol rep 3)

text: C. elegans + C. albicans ATCC 10231 (2h) then L. rhamnosus Lcr35 (4h)

characteristic: treatment


text: live

text: Generic

text: Caenorhabditis elegans

text: whole organism

text: whole organism

text: Probiotic curative treatment (biol rep 2)


text: live

text: Generic

text: Caenorhabditis elegans

text: whole organism

text: whole organism

text: Probiotic curative treatment (biol rep 1)


text: live

text: Generic

text: Caenorhabditis elegans

text: whole organism

text: whole organism

text: Curative treatment control condition (biol rep 4)

text: C. elegans + C. albicans ATCC 10231 (2h) then E. coli OP50 (4h)


text: live

text: Generic

text: Caenorhabditis elegans

text: whole organism

text: whole organism

text: Curative treatment control condition (biol rep 3)


text: live

text: Generic

text: Caenorhabditis elegans

text: whole organism

text: whole organism

text: Curative treatment control condition (biol rep 2)


text: live

text: Generic

text: Caenorhabditis elegans

text: whole organism

text: whole organism

text: Curative treatment control condition (biol rep 1)


text: live

text: Generic

text: Caenorhabditis elegans

text: whole organism

text: whole organism

text: Probiotic preventive treatment (biol rep 4)

text: C. elegans + L. rhamnosus Lcr35 (4h) then C. albicans ATCC 10231 (2h)


text: live

text: Generic

text: Caenorhabditis elegans

text: whole organism

text: whole organism

text: Probiotic preventive treatment (biol rep 3)


text: live

text: Generic

text: Caenorhabditis elegans

text: whole organism

text: whole organism

text: Probiotic preventive treatment (biol rep 2)


text: live

text: Generic

text: Caenorhabditis elegans

text: whole organism

text: whole organism

text: Probiotic preventive treatment (biol rep 1)


text: live

text: Generic

text: Caenorhabditis elegans

text: whole organism

text: whole organism

text: Preventive treatment control condition (biol rep 4)

text: C. elegans + E. coli OP50 (4h) then C. albicans ATCC 10231 (2h)


text: Faculty of pharmacy, University of Tours

text: live

text: Generic

text: Caenorhabditis elegans

text: whole organism

text: whole organism

text: Preventive treatment control condition (biol rep 3)


text: live

text: Generic

text: Caenorhabditis elegans

text: whole organism

text: whole organism

text: Preventive treatment control condition (biol rep 2)


text: live

text: Generic

text: Caenorhabditis elegans

text: whole organism

text: whole organism

text: Preventive treatment control condition (biol rep 1)


text: live

text: Generic

text: Caenorhabditis elegans

text: whole organism

text: whole organism

text: Pathogen control condition (biol rep 3)

text: C. elegans + C. albicans ATCC10231 (4h)


text: live

text: Generic

text: Caenorhabditis elegans

text: whole organism

text: whole organism

text: Pathogen control condition (biol rep 2)

text: C. elegans + C. albicans ATCC10231 (4h)


text: live

text: Generic

text: Caenorhabditis elegans

text: whole organism

text: whole organism

text: Pathogen control condition (biol rep 1)

text: C. elegans + C. albicans ATCC10231 (4h)


text: live

text: Generic

text: Caenorhabditis elegans

text: whole organism

text: whole organism

text: Probiotic control condition (biol rep 3)

text: C. elegans + L. rhamnosus Lcr35 (4h)


text: live

text: Generic

text: Caenorhabditis elegans

text: whole organism

text: whole organism

text: Probiotic control condition (biol rep 2)

text: C. elegans + L. rhamnosus Lcr35 (4h)


text: live

text: Generic

text: Caenorhabditis elegans

text: whole organism

text: whole organism

text: Probiotic control condition (biol rep 1)

text: C. elegans + L. rhamnosus Lcr35 (4h)


text: live

text: Generic

text: Caenorhabditis elegans

text: whole organism

text: whole organism

text: Negative control condition (biol rep 2)

text: C. elegans + E. coli OP50 (4h)


text: live

text: Generic

text: Caenorhabditis elegans

text: whole organism

text: whole organism

text: Negative control condition (biol rep 1)

text: C. elegans + E. coli OP50 (4h)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Juneau County

text: Homo sapiens

characteristic: isolate

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


characteristic: External Id

text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Pepin County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: MDACC

characteristic: INSDC center name

text: live

text: Generic

text: Mus

characteristic: replicate

text: Control tumor

characteristic: strain

text: B16 melanoma

text: WT Tumor 4 untreated

text: untreated

text: WT syngeneic

characteristic: tumor type


text: MDACC

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Mus

text: Control tumor

text: B16 melanoma

text: WT Tumor 3 untreated

text: untreated

text: WT syngeneic


text: MDACC

text: live

characteristic: INSDC status

text: Generic

text: Mus

characteristic: organism

text: Control tumor

text: B16 melanoma

text: WT Tumor 2 untreated

text: untreated

text: WT syngeneic


text: MDACC

text: live

text: Generic

text: Mus

text: Control tumor

text: B16 melanoma

characteristic: tissue

text: WT Tumor 1 untreated

text: untreated

text: WT syngeneic


text: MDACC

text: live

text: Generic

characteristic: NCBI submission model

text: Mus

text: Treated tumor

text: B16 melanoma

text: WT Tumor 4 anti-PD-L1

text: WT syngeneic


text: MDACC

text: live

text: Generic

characteristic: NCBI submission package

text: Mus

text: Treated tumor

text: B16 melanoma

text: WT Tumor 3 anti-PD-L1

text: WT syngeneic


text: MDACC

text: live

text: Generic

characteristic: SRA accession

text: Mus

text: Treated tumor

text: B16 melanoma

text: WT Tumor 2 anti-PD-L1

text: WT syngeneic


text: MDACC

text: live

text: Generic

text: Mus

text: Treated tumor

text: B16 melanoma

text: WT Tumor 1 anti-PD-L1

characteristic: title

text: WT syngeneic


text: MDACC

text: live

text: Generic

text: Mus

text: Control tumor

text: B16 melanoma

text: NO B cells Tumor 4 untreated

text: untreated

characteristic: treatment

text: B cells depleted


text: MDACC

text: live

text: Generic

text: Mus

text: Control tumor

text: B16 melanoma

text: NO B cells Tumor 3 untreated

text: untreated

text: B cells depleted


text: MDACC

text: live

text: Generic

text: Mus

text: Control tumor

text: B16 melanoma

text: NO B cells Tumor 2 untreated

text: untreated

text: B cells depleted


text: MDACC

text: live

text: Generic

text: Mus

text: Control tumor

text: B16 melanoma

text: NO B cells Tumor 1 untreated

text: untreated

text: B cells depleted


text: MDACC

text: live

text: Generic

text: Mus

text: Treated tumor

text: B16 melanoma

text: NO B cells Tumor 4 anti-PD-L1

text: B cells depleted


text: MDACC

text: live

text: Generic

text: Mus

text: Treated tumor

text: B16 melanoma

text: NO B cells Tumor 3 anti-PD-L1

text: B cells depleted


text: MDACC

text: live

text: Generic

text: Mus

text: Treated tumor

text: B16 melanoma

text: NO B cells Tumor 2 anti-PD-L1

text: B cells depleted


text: MDACC

text: live

text: Generic

text: Mus

text: Treated tumor

text: B16 melanoma

text: NO B cells Tumor 1 anti-PD-L1

text: B cells depleted


text: Palazzo Lab, Biochemistry, University of Toronto

text: live

text: Generic

characteristic: cell line

text: embryonic kidney cells

characteristic: cell type

text: WT

characteristic: genotype

text: Homo sapiens

text: kidney

text: kidney

text: HEK293T Cells, shCtrl C, RNA-seq

text: shCtrl-treated


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: embryonic kidney cells

text: WT

text: Homo sapiens

text: kidney

text: kidney

text: HEK293T Cells, shCtrl A, RNA-seq

text: shCtrl-treated


text: live

text: Generic

text: embryonic kidney cells

text: WT

text: Homo sapiens

text: kidney

text: kidney

text: HEK293T Cells, shCtrl Rep3, ribo-seq

text: shCtrl-treated


text: live

text: Generic

text: embryonic kidney cells

text: WT

text: Homo sapiens

text: kidney

text: kidney

text: HEK293T Cells, shCtrl Rep2, ribo-seq

text: shCtrl-treated


text: live

text: Generic

text: embryonic kidney cells

text: WT

text: Homo sapiens

text: kidney

text: kidney

text: HEK293T Cells, shCtrl Rep1, ribo-seq

text: shCtrl-treated


text: live

text: Generic

text: embryonic kidney cells

text: PKM depletion

text: Homo sapiens

text: kidney

text: kidney

text: HEK293T Cells, shPKM C, RNA-seq

text: shPKM-treated


text: live

text: Generic

text: embryonic kidney cells

text: PKM depletion

text: Homo sapiens

text: kidney

text: kidney

text: HEK293T Cells, shPKM B, RNA-seq

text: shPKM-treated


text: live

text: Generic

text: embryonic kidney cells

text: PKM depletion

text: Homo sapiens

text: kidney

text: kidney

text: HEK293T Cells, shPKM Rep3, ribo-seq

text: shPKM-treated


text: live

text: Generic

text: embryonic kidney cells

text: PKM depletion

text: Homo sapiens

text: kidney

text: kidney

text: HEK293T Cells, shPKM Rep2, ribo-seq

text: shPKM-treated


text: live

text: Generic

text: embryonic kidney cells

text: PKM depletion

text: Homo sapiens

text: kidney

text: kidney

text: HEK293T Cells, shPKM Rep1, ribo-seq

text: shPKM-treated


text: University of Pennsylvania

text: live

text: Pathogen.env

text: Stephen Cole

text: USA:PA

characteristic: isolate

text: Canine feces

text: 39.95 N 75.16 W

text: Escherichia coli

text: Pathogen: environmental/food/other sample from Escherichia coli


text: PulseNet Next Generation Subtyping Methods Unit

characteristic: INSDC first public

text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

characteristic: host

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: Hadar

characteristic: serovar

characteristic: strain

text: Salmonella enterica


tag: Namespace:University of Michigan

text: mothur

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

characteristic: alkalinity

characteristic: altitude

characteristic: ammonium

characteristic: biomass

characteristic: bromide

characteristic: calcium

characteristic: chloride

characteristic: chlorophyll

characteristic: density

characteristic: depth

characteristic: description

characteristic: diet

characteristic: dilution

characteristic: elev

characteristic: experiment

text: USA: Michigan

text: Homo sapiens

text: 42.28 N 83.74 W

characteristic: nitrate

characteristic: nitrite

characteristic: nitro

text: metagenome

characteristic: organism

text: metagenome

characteristic: perturbation

characteristic: ph

characteristic: phosphate

characteristic: potassium

characteristic: pressure

characteristic: salinity

text: inoculum

text: success

characteristic: seqsuccess


characteristic: External Id

text: mothur

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: alkalinity

characteristic: altitude

characteristic: ammonium

characteristic: biomass

characteristic: bromide

characteristic: calcium

characteristic: chloride

characteristic: chlorophyll

characteristic: density

characteristic: depth

text: USA: Michigan

text: Homo sapiens

characteristic: host

text: 42.28 N 83.74 W

text: metagenome

text: metagenome

text: inoculum

text: success


characteristic: External Id

text: mothur

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: description

text: brm

characteristic: diet

characteristic: dilution

characteristic: elev

characteristic: experiment

text: USA: Michigan

text: Homo sapiens

text: 42.28 N 83.74 W

characteristic: nitrate

characteristic: nitrite

characteristic: nitro

text: metagenome

characteristic: organism

text: metagenome

characteristic: perturbation

characteristic: ph

characteristic: phosphate

characteristic: potassium

characteristic: pressure

characteristic: salinity

text: sample

text: success

characteristic: seqsuccess


characteristic: External Id

text: mothur

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: alkalinity

characteristic: altitude

characteristic: ammonium

characteristic: biomass

characteristic: bromide

characteristic: calcium

characteristic: chloride

characteristic: chlorophyll

characteristic: density

characteristic: depth

text: brm

text: USA: Michigan

text: Homo sapiens

characteristic: host

text: 42.28 N 83.74 W

text: metagenome

text: metagenome

text: sample

text: success


characteristic: External Id

text: mothur

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: description

text: brm

characteristic: diet

characteristic: dilution

characteristic: elev

characteristic: experiment

text: USA: Michigan

text: Homo sapiens

text: 42.28 N 83.74 W

characteristic: nitrate

characteristic: nitrite

characteristic: nitro

text: metagenome

characteristic: organism

text: metagenome

characteristic: perturbation

characteristic: ph

characteristic: phosphate

characteristic: potassium

characteristic: pressure

characteristic: salinity

text: sample

text: fail

characteristic: seqsuccess


characteristic: External Id

text: mothur

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: alkalinity

characteristic: altitude

characteristic: ammonium

characteristic: biomass

characteristic: bromide

characteristic: calcium

characteristic: chloride

characteristic: chlorophyll

characteristic: density

characteristic: depth

text: inulin

text: USA: Michigan

text: Homo sapiens

characteristic: host

text: 42.28 N 83.74 W

text: metagenome

text: metagenome

text: sample

text: success


characteristic: External Id

text: mothur

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: description

text: inulin

characteristic: diet

characteristic: dilution

characteristic: elev

characteristic: experiment

text: USA: Michigan

text: Homo sapiens

text: 42.28 N 83.74 W

characteristic: nitrate

characteristic: nitrite

characteristic: nitro

text: metagenome

characteristic: organism

text: metagenome

characteristic: perturbation

characteristic: ph

characteristic: phosphate

characteristic: potassium

characteristic: pressure

characteristic: salinity

text: sample

text: fail

characteristic: seqsuccess


characteristic: External Id

text: mothur

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: alkalinity

characteristic: altitude

characteristic: ammonium

characteristic: biomass

characteristic: bromide

characteristic: calcium

characteristic: chloride

characteristic: chlorophyll

characteristic: density

characteristic: depth

text: inulin

text: USA: Michigan

text: Homo sapiens

characteristic: host

text: 42.28 N 83.74 W

text: metagenome

text: metagenome

text: sample

text: success


characteristic: External Id

text: mothur

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: description

text: brm

characteristic: diet

characteristic: dilution

characteristic: elev

characteristic: experiment

text: USA: Michigan

text: Homo sapiens

text: 42.28 N 83.74 W

characteristic: nitrate

characteristic: nitrite

characteristic: nitro

text: metagenome

characteristic: organism

text: metagenome

characteristic: perturbation

characteristic: ph

characteristic: phosphate

characteristic: potassium

characteristic: pressure

characteristic: salinity

text: inoculum

text: fail

characteristic: seqsuccess


characteristic: External Id

text: mothur

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: alkalinity

characteristic: altitude

characteristic: ammonium

characteristic: biomass

characteristic: bromide

characteristic: calcium

characteristic: chloride

characteristic: chlorophyll

characteristic: density

characteristic: depth

text: brm

text: USA: Michigan

text: Homo sapiens

characteristic: host

text: 42.28 N 83.74 W

text: metagenome

text: metagenome

text: inoculum

text: success


characteristic: External Id

text: mothur

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: description

text: brm

characteristic: diet

characteristic: dilution

characteristic: elev

characteristic: experiment

text: USA: Michigan

text: Homo sapiens

text: 42.28 N 83.74 W

characteristic: nitrate

characteristic: nitrite

characteristic: nitro

text: metagenome

characteristic: organism

text: metagenome

characteristic: perturbation

characteristic: ph

characteristic: phosphate

characteristic: potassium

characteristic: pressure

text: oc

characteristic: salinity

text: inoculum

text: success

characteristic: seqsuccess

text: inoc


characteristic: External Id

text: mothur

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: alkalinity

characteristic: altitude

characteristic: ammonium

characteristic: biomass

characteristic: bromide

characteristic: calcium

characteristic: chloride

characteristic: chlorophyll

characteristic: density

characteristic: depth

text: brm

text: USA: Michigan

text: Homo sapiens

characteristic: host

text: 42.28 N 83.74 W

text: metagenome

text: metagenome


characteristic: External Id

text: mothur

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: description

text: brm

characteristic: diet

characteristic: dilution

characteristic: elev

characteristic: experiment

text: USA: Michigan

text: Homo sapiens

text: 42.28 N 83.74 W

characteristic: nitrate

characteristic: nitrite

characteristic: nitro

text: metagenome

characteristic: organism

text: metagenome

characteristic: perturbation

characteristic: ph

characteristic: phosphate

characteristic: potassium

characteristic: pressure

characteristic: salinity

characteristic: seqsuccess


characteristic: External Id

text: fd

text: mothur

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: alkalinity

characteristic: altitude

characteristic: ammonium

characteristic: biomass

characteristic: bromide

characteristic: calcium

characteristic: chloride

characteristic: chlorophyll

characteristic: density

characteristic: depth

text: brm

text: USA: Michigan

text: Homo sapiens

characteristic: host

text: 42.28 N 83.74 W

text: metagenome

text: metagenome

text: fd

text: inoculum

text: success

text: fd