characteristic: External Id

text: SARS-CoV-2/Human/USA/CA-CDC-STM-CSQH5XZT7/2022

text: CDC-OAMD

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: 'Helix'

text: Nasal swab

characteristic: collection method

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

characteristic: host

text: White

text: male

text: nasal swab

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)


status: PUBLIC

text: SARS-CoV-2/Human/USA/CA-CDC-STM-CPBGXGTB2/2022

text: CDC-OAMD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

characteristic: SRA accession

text: 'Helix'

tag: attribute

characteristic: collected by

characteristic: collection date

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

characteristic: geo loc name

text: Homo sapiens

characteristic: host age

characteristic: host disease

text: Other Race

characteristic: host race

text: male

characteristic: host sex

characteristic: isolate

text: nasal swab

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: baseline surveillance (random sampling)

text: CDC Sars CoV2 Sequencing Baseline Constellation

characteristic: title


characteristic: External Id

text: SARS-CoV-2/Human/USA/CA-CDC-STM-C4GYY3MZA/2022

text: CDC-OAMD

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: 'Helix'

text: Nasal swab

characteristic: collection method

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

characteristic: host

text: male

text: nasal swab

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-C4G3Q6AFZ/2022

text: CDC-OAMD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

characteristic: SRA accession

text: 'Helix'

characteristic: collected by

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: Other Race

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-BRBKV5786/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

characteristic: collection date

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

characteristic: geo loc name

text: Homo sapiens

characteristic: host age

characteristic: host disease

text: White

characteristic: host race

text: male

characteristic: host sex

characteristic: isolate

text: nasal swab

text: baseline surveillance (random sampling)


characteristic: External Id

text: SARS-CoV-2/Human/USA/CA-CDC-STM-BHMXPG4YS/2022

text: CDC-OAMD

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: 'Helix'

text: Nasal swab

characteristic: collection method

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

characteristic: host

text: White

text: male

text: nasal swab

characteristic: organism

text: baseline surveillance (random sampling)

characteristic: title


text: SARS-CoV-2/Human/USA/CA-CDC-STM-AZ7TWHXK5/2022

text: CDC-OAMD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: Other Race

text: female

text: nasal swab

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-AY778U2JE/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: 'Helix'

characteristic: collected by

characteristic: collection date

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

characteristic: geo loc name

text: Homo sapiens

characteristic: host age

characteristic: host disease

text: White

characteristic: host race

text: male

text: nasal swab

text: baseline surveillance (random sampling)


characteristic: External Id

text: SARS-CoV-2/Human/USA/CA-CDC-STM-AMESJEGMM/2022

text: CDC-OAMD

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: 'Helix'

text: Nasal swab

characteristic: collection method

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

characteristic: host

text: White

text: male

characteristic: host sex

characteristic: isolate

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-A65GCCU9E/2022

text: CDC-OAMD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: Asian

text: female

text: nasal swab

characteristic: organism

text: baseline surveillance (random sampling)

characteristic: title


text: SARS-CoV-2/Human/USA/CA-CDC-STM-A4WNYTVBN/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: 'Helix'

characteristic: collected by

characteristic: collection date

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

characteristic: geo loc name

text: Homo sapiens

characteristic: host age

text: Black or African American

text: female

text: nasal swab

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)


characteristic: External Id

text: SARS-CoV-2/Human/USA/CA-CDC-STM-97Z9XEXEY/2022

text: CDC-OAMD

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: 'Helix'

text: Nasal swab

characteristic: collection method

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

characteristic: host

characteristic: host disease

text: Decline

characteristic: host race

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-94WFY425R/2022

text: CDC-OAMD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: Not Provided

text: female

characteristic: host sex

characteristic: isolate

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-945F5GM4N/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: 'Helix'

characteristic: collected by

characteristic: collection date

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

characteristic: geo loc name

text: Homo sapiens

characteristic: host age

text: White

text: male

text: nasal swab

characteristic: organism

text: baseline surveillance (random sampling)

characteristic: title


text: SARS-CoV-2/Human/USA/CA-CDC-STM-8H2HTYDHR/2022

characteristic: External Id

text: CDC-OAMD

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: 'Helix'

text: Nasal swab

characteristic: collection method

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

characteristic: host

text: American Indian or Alaska Native

text: female

text: nasal swab

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-85E5PE8UF/2022

text: CDC-OAMD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

characteristic: host disease

text: White

characteristic: host race

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-7FRWUHP34/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: 'Helix'

characteristic: collected by

characteristic: collection date

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

characteristic: geo loc name

text: Homo sapiens

characteristic: host age

text: White

text: male

characteristic: host sex

characteristic: isolate

text: nasal swab

text: baseline surveillance (random sampling)


characteristic: External Id

text: SARS-CoV-2/Human/USA/CA-CDC-STM-6RPHEEUP2/2022

text: CDC-OAMD

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: 'Helix'

text: Nasal swab

characteristic: collection method

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

characteristic: host

text: Other Race

text: female

text: nasal swab

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: baseline surveillance (random sampling)

characteristic: title


text: SARS-CoV-2/Human/USA/CA-CDC-STM-6N57RBKS2/2022

text: CDC-OAMD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: Asian

text: female

text: nasal swab

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)

text: CDC Sars CoV2 Sequencing Baseline Constellation


text: SARS-CoV-2/Human/USA/CA-CDC-STM-62KTSFGTN/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: 'Helix'

characteristic: collected by

characteristic: collection date

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

characteristic: geo loc name

text: Homo sapiens

characteristic: host age

characteristic: host disease

text: White

characteristic: host race

text: female

text: nasal swab

text: baseline surveillance (random sampling)


characteristic: External Id

text: SARS-CoV-2/Human/USA/CA-CDC-STM-5VUBW35CC/2022

text: CDC-OAMD

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: 'Helix'

text: Nasal swab

characteristic: collection method

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

characteristic: host

text: Other Race

text: female

characteristic: host sex

characteristic: isolate

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-5GYY7C4BC/2022

text: CDC-OAMD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: Other Race

text: female

text: nasal swab

characteristic: organism

text: baseline surveillance (random sampling)

characteristic: title


text: SARS-CoV-2/Human/USA/CA-CDC-STM-5C3KBHYAS/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: 'Helix'

characteristic: collected by

characteristic: collection date

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

characteristic: geo loc name

text: Homo sapiens

characteristic: host age

text: White

text: male

text: nasal swab

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)


characteristic: External Id

text: SARS-CoV-2/Human/USA/CA-CDC-STM-565CWDA5B/2022

text: CDC-OAMD

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: 'Helix'

text: Nasal swab

characteristic: collection method

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

characteristic: host

characteristic: host disease

text: Asian

characteristic: host race

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-4T5Y9CMSP/2022

text: CDC-OAMD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: Other Race

text: female

characteristic: host sex

characteristic: isolate

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-4QY732JWA/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: 'Helix'

characteristic: collected by

characteristic: collection date

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

characteristic: geo loc name

text: Homo sapiens

characteristic: host age

text: White

text: female

text: nasal swab

characteristic: organism

text: baseline surveillance (random sampling)

characteristic: title


text: SARS-CoV-2/Human/USA/CA-CDC-STM-4NGPSCUCE/2022

characteristic: External Id

text: CDC-OAMD

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: 'Helix'

text: Nasal swab

characteristic: collection method

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

characteristic: host

text: Black or African American

text: male

text: nasal swab

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-4JJ26C7U3/2022

text: CDC-OAMD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

characteristic: host disease

text: Asian

characteristic: host race

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-42QTZURPR/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: 'Helix'

characteristic: collected by

characteristic: collection date

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

characteristic: geo loc name

text: Homo sapiens

characteristic: host age

text: White

text: male

characteristic: host sex

characteristic: isolate

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-3WZAPKR74/2022

characteristic: External Id

text: CDC-OAMD

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: 'Helix'

text: Nasal swab

characteristic: collection method

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

characteristic: host

text: Not sure

text: female

text: nasal swab

characteristic: organism

text: baseline surveillance (random sampling)

characteristic: title


text: SARS-CoV-2/Human/USA/CA-CDC-STM-3H52A242R/2022

text: CDC-OAMD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: Other Race

text: male

text: nasal swab

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-3GFYMS9KT/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: 'Helix'

characteristic: collected by

characteristic: collection date

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

characteristic: geo loc name

text: Homo sapiens

characteristic: host age

characteristic: host disease

text: White

characteristic: host race

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-3D8D2BEXD/2022

characteristic: External Id

text: CDC-OAMD

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: 'Helix'

text: Nasal swab

characteristic: collection method

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

characteristic: host

text: Other Race

text: male

characteristic: host sex

characteristic: isolate

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-2962Y4PY7/2022

text: CDC-OAMD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: Native Hawaiian or Other Pacific Islander

text: female

text: nasal swab

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: baseline surveillance (random sampling)

characteristic: title


text: SARS-CoV-2/Human/USA/AZ-CDC-STM-ZDSP8FVWF/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: 'Helix'

characteristic: collected by

characteristic: collection date

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Arizona

characteristic: geo loc name

text: Homo sapiens

characteristic: host age

text: Other Race

text: female

text: nasal swab

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)

text: CDC Sars CoV2 Sequencing Baseline Constellation


text: SARS-CoV-2/Human/USA/AZ-CDC-STM-WC65QPKFW/2022

characteristic: External Id

text: CDC-OAMD

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: 'Helix'

text: Nasal swab

characteristic: collection method

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Arizona

text: Homo sapiens

characteristic: host

characteristic: host disease

text: White

characteristic: host race

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/AZ-CDC-STM-VZ52U7C47/2022

text: CDC-OAMD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Arizona

text: Homo sapiens

text: White

text: male

characteristic: host sex

characteristic: isolate

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/AZ-CDC-STM-UWHVB5MKH/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: 'Helix'

characteristic: collected by

characteristic: collection date

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Arizona

characteristic: geo loc name

text: Homo sapiens

characteristic: host age

text: White

text: male

text: nasal swab

characteristic: organism

text: baseline surveillance (random sampling)

characteristic: title


text: SARS-CoV-2/Human/USA/AZ-CDC-STM-UP4Z9ERXP/2022

characteristic: External Id

text: CDC-OAMD

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: 'Helix'

text: Nasal swab

characteristic: collection method

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Arizona

text: Homo sapiens

characteristic: host

text: Other Race

text: female

text: nasal swab

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/AZ-CDC-STM-TESV96ZUD/2022

text: CDC-OAMD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Arizona

text: Homo sapiens

characteristic: host disease

text: Other Race

characteristic: host race

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/AZ-CDC-STM-RZGEQRQ39/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: 'Helix'

characteristic: collected by

characteristic: collection date

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Arizona

characteristic: geo loc name

text: Homo sapiens

characteristic: host age

text: White

text: female

characteristic: host sex

characteristic: isolate

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/AZ-CDC-STM-PFSR7FZDK/2022

characteristic: External Id

text: CDC-OAMD

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: 'Helix'

text: Nasal swab

characteristic: collection method

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Arizona

text: Homo sapiens

characteristic: host

text: White

text: female

text: nasal swab

characteristic: organism

text: baseline surveillance (random sampling)

characteristic: title


text: SARS-CoV-2/Human/USA/AZ-CDC-STM-KZPR3A9QM/2022

text: CDC-OAMD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Arizona

text: Homo sapiens

text: White

text: male

text: nasal swab

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/AZ-CDC-STM-KM3P6EWYY/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: 'Helix'

characteristic: collected by

characteristic: collection date

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Arizona

characteristic: geo loc name

text: Homo sapiens

characteristic: host age

characteristic: host disease

text: Other Race

characteristic: host race

text: female

text: nasal swab

text: baseline surveillance (random sampling)


characteristic: External Id

text: SARS-CoV-2/Human/USA/AZ-CDC-STM-JXFXWJZHB/2022

text: CDC-OAMD

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: 'Helix'

text: Nasal swab

characteristic: collection method

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Arizona

text: Homo sapiens

characteristic: host

text: White

text: male

characteristic: host sex

characteristic: isolate

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/AZ-CDC-STM-JFNDCCTE8/2022

text: CDC-OAMD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Arizona

text: Homo sapiens

text: Asian

text: female

text: nasal swab

characteristic: organism

text: baseline surveillance (random sampling)

characteristic: title


text: SARS-CoV-2/Human/USA/AZ-CDC-STM-HSJGDYDMU/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: 'Helix'

characteristic: collected by

characteristic: collection date

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Arizona

characteristic: geo loc name

text: Homo sapiens

characteristic: host age

text: White

text: male

text: nasal swab

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)


characteristic: External Id

text: SARS-CoV-2/Human/USA/AZ-CDC-STM-GAJW5ERGP/2022

text: CDC-OAMD

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: 'Helix'

text: Nasal swab

characteristic: collection method

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Arizona

text: Homo sapiens

characteristic: host

characteristic: host disease

text: White

characteristic: host race

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/AZ-CDC-STM-FAZJQRB44/2022

text: CDC-OAMD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Arizona

text: Homo sapiens

text: White

text: male

characteristic: host sex

characteristic: isolate

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/AZ-CDC-STM-E2JWSJDKE/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: 'Helix'

characteristic: collected by

characteristic: collection date

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Arizona

characteristic: geo loc name

text: Homo sapiens

characteristic: host age

text: Other Race

text: female

text: nasal swab

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: baseline surveillance (random sampling)

characteristic: title


characteristic: External Id

text: SARS-CoV-2/Human/USA/AZ-CDC-STM-C64ZUVWPX/2022

text: CDC-OAMD

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: 'Helix'

text: Nasal swab

characteristic: collection method

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Arizona

text: Homo sapiens

characteristic: host

text: White

text: male

text: nasal swab

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)

text: CDC Sars CoV2 Sequencing Baseline Constellation


text: SARS-CoV-2/Human/USA/AZ-CDC-STM-9EDZB3D22/2022

text: CDC-OAMD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Arizona

text: Homo sapiens

characteristic: host disease

text: White

characteristic: host race

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/AZ-CDC-STM-85CZK4J6J/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: 'Helix'

characteristic: collected by

characteristic: collection date

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Arizona

characteristic: geo loc name

text: Homo sapiens

characteristic: host age

text: Asian

text: female

characteristic: host sex

characteristic: isolate

text: nasal swab

text: baseline surveillance (random sampling)


characteristic: External Id

text: SARS-CoV-2/Human/USA/AZ-CDC-STM-6HM6ZFSZV/2022

text: CDC-OAMD

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: 'Helix'

text: Nasal swab

characteristic: collection method

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Arizona

text: Homo sapiens

characteristic: host

text: Other Race

text: male

text: nasal swab

characteristic: organism

text: baseline surveillance (random sampling)

characteristic: title


text: SARS-CoV-2/Human/USA/AZ-CDC-STM-47GUUV63J/2022

text: CDC-OAMD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Arizona

text: Homo sapiens

text: Other Race

text: male

text: nasal swab

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/AZ-CDC-STM-39M7KKT7G/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: 'Helix'

characteristic: collected by

characteristic: collection date

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Arizona

characteristic: geo loc name

text: Homo sapiens

characteristic: host age

characteristic: host disease

text: White

characteristic: host race

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/AL-CDC-STM-HMHWHKSAH/2022

characteristic: External Id

text: CDC-OAMD

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: 'Helix'

text: Nasal swab

characteristic: collection method

text: Nasal swab

text: N

text: S

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Alabama

text: Homo sapiens

characteristic: host

text: White

text: male

characteristic: host sex

characteristic: isolate

text: nasal swab

text: baseline surveillance (random sampling)


text: Qingdao Agricultural University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Plant

characteristic: NCBI submission package

text: Lu Hehong

characteristic: cultivar

text: not collected

text: China:Qingdao

text: Paeonia suffruticosa

characteristic: organism

text: bud

characteristic: tissue

text: Plant sample from Paeonia suffruticosa Andr

characteristic: title


H1 hESCs

text: Sloan-Kettering Institute for Cancer Research

characteristic: INSDC secondary accession

text: live

text: Human

characteristic: SRA accession

text: not applicable'

characteristic: age

text: WiCell Institute

text: H1 hESCs

text: Original human ESCs

text: Homo sapiens

text: male

characteristic: sex

text: human blastocysts

text: Human sample from Homo sapiens


H1 SOX2-P2A-H2B-tdTomato reporter line

characteristic: External Id

text: live

characteristic: INSDC status

text: Human

characteristic: NCBI submission model

text: not applicable'

text: WiCell Institute

text: H1 SOX2-P2A-H2B-tdTomato reporter line

text: Gene edited in H1 cells

text: Homo sapiens

text: male

text: human blastocysts

text: Human sample from Homo sapiens


UCTZ-iPSCs

text: live

text: Human

text: MSK Stem Cell Core

text: UCTZ-iPSCs

text: hiPSCs generated from urine cells

text: Homo sapiens

text: female

text: Urine

text: Human sample from Homo sapiens


text: Tamir Chandra, Institute of Cancer and Genetics, University of Edinburgh

text: live

text: Generic

text: PBMCs

characteristic: cell type

characteristic: cohort

text: Homo sapiens

characteristic: sequencing batch

text: Human Blood (PBMCs)

text: Blood

characteristic: wave


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: PBMCs

text: Homo sapiens

text: Human Blood (PBMCs)

text: Blood


text: live

text: Generic

characteristic: NCBI submission package

text: PBMCs

text: CONTROL

text: Homo sapiens

characteristic: organism

text: Human Blood (PBMCs)

text: Blood

text: CONTROL


text: Rutgers New Jersey Medical School

text: live

text: Microbe, viral or environmental

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6230

characteristic: strain

characteristic: title


text: Wenzhou Medical University

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

characteristic: SRA accession

text: Termed as "WT1" in the paper

characteristic: description

text: Wild-type

characteristic: genotype

text: GOOD

text: Mus musculus

characteristic: replicate

text: Whole retinal tissue

text: not collected

text: WT

text: retina

characteristic: tissue

text: Model organism or animal sample from Mus musculus


characteristic: External Id

text: Wenzhou Medical University

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

characteristic: age

text: Termed as "WT2" in the paper

text: Wild-type

text: GOOD

text: Mus musculus

text: Whole retinal tissue

text: not collected

characteristic: sex

text: WT

text: retina


text: Wenzhou Medical University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Model organism or animal

text: Termed as "WT3" in the paper

text: Wild-type

text: GOOD

text: Mus musculus

text: Whole retinal tissue

text: not collected

text: WT

text: retina


text: Wenzhou Medical University

characteristic: INSDC last update

text: live

text: Model organism or animal

characteristic: NCBI submission package

text: Termed as "MT1" in the paper

text: Homozygote

text: GOOD

text: Mus musculus

text: Whole retinal tissue

text: not collected

text: miR-96 Mutant

text: retina


text: Wenzhou Medical University

text: live

text: Model organism or animal

text: Termed as "MT2" in the paper

text: Homozygote

text: GOOD

text: Mus musculus

characteristic: organism

text: Whole retinal tissue

text: not collected

text: miR-96 Mutant

characteristic: strain

text: retina


text: Wenzhou Medical University

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

text: Termed as "MT3" in the paper

text: Homozygote

text: GOOD

text: Mus musculus

text: Whole retinal tissue

text: not collected

text: miR-96 Mutant

text: retina

characteristic: title


text: Rutgers New Jersey Medical School

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6231


text: Rutgers New Jersey Medical School

text: live

text: Microbe, viral or environmental

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6232


text: Rutgers New Jersey Medical School

text: live

text: Microbe, viral or environmental

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6233


text: Rutgers New Jersey Medical School

text: live

text: Microbe, viral or environmental

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6234


text: Rutgers New Jersey Medical School

text: live

text: Microbe, viral or environmental

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6235


text: Rutgers New Jersey Medical School

text: live

text: Microbe, viral or environmental

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6236


text: Rutgers New Jersey Medical School

text: live

text: Microbe, viral or environmental

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6237


text: Rutgers New Jersey Medical School

text: live

text: Microbe, viral or environmental

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6238


text: Rutgers New Jersey Medical School

text: live

text: Microbe, viral or environmental

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6239


text: Rutgers New Jersey Medical School

text: live

text: Microbe, viral or environmental

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6240


text: Rutgers New Jersey Medical School

text: live

text: Microbe, viral or environmental

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6241


text: dbGaP

text: live

text: Generic

text: RNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Peripheral blood

characteristic: body site

text: HMB

text: Monocytes

characteristic: histological type

text: No

characteristic: is tumor

text: Homo sapiens

text: female

text: Case-Control

characteristic: study design

characteristic: study name

text: No

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Non-tumor RNA sample from Peripheral blood of a human female participant in the dbGaP study SLAMF7 Regulates Synovial Macrophages in Rheumatoid Arthritis


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: RNA

text: Peripheral blood

text: HMB

text: Monocytes

text: No

text: Homo sapiens

characteristic: organism

text: female

characteristic: sex

text: Case-Control

text: SLAMF7 Regulates Synovial Macrophages in Rheumatoid Arthritis

text: No


text: dbGaP

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: RNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Peripheral blood

characteristic: body site

text: HMB

text: Monocyte derived macrophages

characteristic: histological type

text: No

text: Homo sapiens

text: female

text: Case-Control

text: No

characteristic: title


characteristic: External Id

text: dbGaP

text: live

text: Generic

text: RNA

text: Peripheral blood

text: HMB

text: Monocytes

text: No

characteristic: is tumor

text: Homo sapiens

text: male

text: Case-Control

characteristic: study design

text: Arthritis

characteristic: study disease

characteristic: study name

text: Yes

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Non-tumor RNA sample from Peripheral blood of a human male participant in the dbGaP study SLAMF7 Regulates Synovial Macrophages in Rheumatoid Arthritis


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: RNA

text: Synovial fluid

text: HMB

text: Monocytes

text: No

text: Homo sapiens

characteristic: organism

text: female

characteristic: sex

text: Case-Control

text: Arthritis

text: Yes

text: Non-tumor RNA sample from Synovial fluid of a human female participant in the dbGaP study SLAMF7 Regulates Synovial Macrophages in Rheumatoid Arthritis


characteristic: External Id

text: dbGaP

text: live

text: Generic

characteristic: SRA accession

text: RNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Synovial fluid

characteristic: body site

text: HMB

text: Monocytes

characteristic: histological type

text: No

characteristic: is tumor

text: Homo sapiens

text: male

text: Case-Control

text: Arthritis

text: Yes

text: Non-tumor RNA sample from Synovial fluid of a human male participant in the dbGaP study SLAMF7 Regulates Synovial Macrophages in Rheumatoid Arthritis

characteristic: title


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: RNA

text: Peripheral blood

text: HMB

text: Monocytes

text: No

text: Homo sapiens

text: female

text: Case-Control

characteristic: study design

text: Arthritis

characteristic: study disease

characteristic: study name

text: Yes

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle


characteristic: External Id

text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: RNA

text: Peripheral blood

text: HMB

text: Monocytes

text: No

text: Homo sapiens

characteristic: organism

text: male

characteristic: sex

text: Case-Control

text: No


text: Rutgers New Jersey Medical School

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6230

characteristic: strain

characteristic: title


text: Rutgers New Jersey Medical School

text: live

text: Microbe, viral or environmental

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6231


text: Rutgers New Jersey Medical School

text: live

text: Microbe, viral or environmental

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6232


text: Rutgers New Jersey Medical School

text: live

text: Microbe, viral or environmental

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6233


text: Rutgers New Jersey Medical School

text: live

text: Microbe, viral or environmental

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6234


text: Rutgers New Jersey Medical School

text: live

text: Microbe, viral or environmental

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6235


text: Rutgers New Jersey Medical School

text: live

text: Microbe, viral or environmental

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6236


text: Rutgers New Jersey Medical School

text: live

text: Microbe, viral or environmental

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6237


text: Rutgers New Jersey Medical School

text: live

text: Microbe, viral or environmental

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6238


text: Rutgers New Jersey Medical School

text: live

text: Microbe, viral or environmental

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6239


text: Rutgers New Jersey Medical School

text: live

text: Microbe, viral or environmental

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6240


text: Houston Methodist Center For Molecular and Translational Human Infectious Diseases Research

text: live

text: SARS-CoV-2: clinical or host-associated

text: HMCMTHIDR

text: USA: Texas, Houston

text: Homo sapiens

characteristic: host

text: covid 19

characteristic: host disease

characteristic: isolate

text: Clinical Specimen

text: Severe acute respiratory syndrome coronavirus 2

text: SARS-Cov2 Clinical Specimen, Houston Methodist


text: Jiang, life science and technology, Tongji University

text: live

text: Generic

characteristic: developmental stage

text: Mus musculus

text: extraembryonic ectoderm

text: extraembryonic ectoderm

characteristic: tissue

text: control

characteristic: treatment


characteristic: External Id

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Mus musculus

text: extraembryonic ectoderm

text: extraembryonic ectoderm

text: Kdm5b siRNA


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: H3K4me3 (Cell Signaling Technology, 9727S, USA)

characteristic: chip antibody

text: Mus musculus

text: extraembryonic ectoderm

text: extraembryonic ectoderm

text: control


characteristic: INSDC center name

text: live

text: Generic

characteristic: SRA accession

text: Mus musculus

characteristic: organism

text: extraembryonic ectoderm

text: extraembryonic ectoderm

text: control


characteristic: INSDC first public

text: live

text: Generic

text: Mus musculus

text: extraembryonic ectoderm

text: extraembryonic ectoderm

characteristic: title


text: live

text: Generic

text: Mus musculus

text: extraembryonic ectoderm

text: extraembryonic ectoderm


text: Rutgers New Jersey Medical School

text: live

text: Microbe, viral or environmental

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6230

characteristic: strain


text: Rutgers New Jersey Medical School

text: live

text: Microbe, viral or environmental

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6231


text: Rutgers New Jersey Medical School

text: live

text: Microbe, viral or environmental

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6232


text: Rutgers New Jersey Medical School

text: live

text: Microbe, viral or environmental

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6233


text: Rutgers New Jersey Medical School

text: live

text: Microbe, viral or environmental

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6234


text: Rutgers New Jersey Medical School

text: live

text: Microbe, viral or environmental

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6235


text: Rutgers New Jersey Medical School

text: live

text: Microbe, viral or environmental

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6236


text: Rutgers New Jersey Medical School

text: live

text: Microbe, viral or environmental

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6237


text: Rutgers New Jersey Medical School

text: live

text: Microbe, viral or environmental

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6238


text: Rutgers New Jersey Medical School

text: live

text: Microbe, viral or environmental

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6239


text: Rutgers New Jersey Medical School

text: live

text: Microbe, viral or environmental

text: USA: Newark, NJ

text: Laboratory strain

text: Mycobacterium tuberculosis

text: DNA

text: MC2 6240


name: Animal sample from Lagopus muta (Rock ptarmigan), bLagMut2

text: live

text: Model organism or animal

text: Icelandic Institute of Natural History

characteristic: biomaterial provider

text: Kristinn P. Magnusson

characteristic: collected by

characteristic: collection date

text: The Rock ptarmigan is a bird species belonging to the Phasianidae family. The species has a circumpolar distribution inhabiting sub-arctic and arctic regions in addition to a few more southern alpine regions. This sample is being included in the Vertebrate Genomes Project. The sample was collected by Kristinn P. Magnusson who also provided the finances for the project through his Icelandic Research Fund grant 206529-052, together with Jacob Hoglund with grant VR 2018-04635.

characteristic: description

text: adult

characteristic: dev stage

text: Iceland: Husavik

characteristic: geo loc name

characteristic: isolate

text: 66.088900 N 17.264700 W

characteristic: lat lon

text: Lagopus muta

text: female

characteristic: sex

text: Dry ice, -70C

text: blood

text: Animal sample from Lagomus muta (Rock ptarmigan), bLagMut2

text: RNAlater (Sigma Aldrich)


name: Animal sample from Lagomus muta (Rock ptarmigan), bLagMut3

characteristic: External Id

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Icelandic Institute of Natural History

text: Kristinn P. Magnusson

text: The Rock ptarmigan is a bird species belonging to the Phasianidae family. The species has a circumpolar distribution inhabiting sub-arctic and arctic regions in addition to a few more southern alpine regions. This sample is being included in the Vertebrate Genomes Project. The sample was collected by Kristinn P. Magnusson who also provided the finances for the project through his Icelandic Research Fund grant 206529-052, together with Jacob Hoglund with grant VR 2018-04635. The genome was assembled and

text: adult

text: Iceland: Husavik

text: 66.088900 N 17.264700 W

text: Lagopus muta

text: male

text: Dry ice, -70C

text: blood

characteristic: tissue

text: Model organism or animal sample from Lagopus muta, bLagMut3

text: RNAlater (Sigma Aldrich)

characteristic: treatment


text: Biology, Miami University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: SRA accession

characteristic: Stage

text: Gallus gallus

characteristic: organism

text: Retinal pigment epithelium

text: RNA-Seq E5 6hPR+FGF2 3

characteristic: title

text: 6hPR + FGF2


text: Biology, Miami University

text: live

text: Generic

text: Gallus gallus

text: Retinal pigment epithelium

text: RNA-Seq E5 6hPR+FGF2 2

text: 6hPR + FGF2


text: Biology, Miami University

text: live

text: Generic

text: Gallus gallus

text: Retinal pigment epithelium

text: RNA-Seq E5 6hPR+FGF2 1

text: 6hPR + FGF2


text: Biology, Miami University

text: live

text: Generic

text: Gallus gallus

text: Retinal pigment epithelium

text: RNA-Seq E5 6hPR 3


text: Biology, Miami University

text: live

text: Generic

text: Gallus gallus

text: Retinal pigment epithelium

text: RNA-Seq E5 6hPR 2


text: Biology, Miami University

text: live

text: Generic

text: Gallus gallus

text: Retinal pigment epithelium

text: RNA-Seq E5 6hPR 1


text: Biology, Miami University

text: live

text: Generic

text: Gallus gallus

text: Retinal pigment epithelium

text: RNA-Seq E5 RPE 3

text: Development


text: Biology, Miami University

text: live

text: Generic

text: Gallus gallus

text: Retinal pigment epithelium

text: RNA-Seq E5 RPE 2

text: Development


text: Biology, Miami University

text: live

text: Generic

text: Gallus gallus

text: Retinal pigment epithelium

text: RNA-Seq E5 RPE 1

text: Development


text: Biology, Miami University

text: live

text: Generic

text: Gallus gallus

text: Retinal pigment epithelium

text: RNA-Seq E4 6hPR+FGF2 3

text: 6hPR + FGF2


text: Biology, Miami University

text: live

text: Generic

text: Gallus gallus

text: Retinal pigment epithelium

text: RNA-Seq E4 6hPR+FGF2 2

text: 6hPR + FGF2


text: Biology, Miami University

text: live

text: Generic

text: Gallus gallus

text: Retinal pigment epithelium

text: RNA-Seq E4 6hPR+FGF2 1

text: 6hPR + FGF2


text: Biology, Miami University

text: live

text: Generic

text: Gallus gallus

text: Retinal pigment epithelium

text: RNA-Seq E4 6hPR 3


text: Biology, Miami University

text: live

text: Generic

text: Gallus gallus

text: Retinal pigment epithelium

text: RNA-Seq E4 6hPR 2


text: Biology, Miami University

text: live

text: Generic

text: Gallus gallus

text: Retinal pigment epithelium

text: RNA-Seq E4 6hPR 1


text: Biology, Miami University

text: live

text: Generic

text: Gallus gallus

text: Retinal pigment epithelium

text: RNA-Seq E4 RPE 3

text: Development


text: Biology, Miami University

text: live

text: Generic

text: Gallus gallus

text: Retinal pigment epithelium

text: RNA-Seq E4 RPE 2

text: Development


text: Biology, Miami University

text: live

text: Generic

text: Gallus gallus

text: Retinal pigment epithelium

text: RNA-Seq E4 RPE 1

text: Development


text: Biology, Miami University

text: live

text: Generic

text: Gallus gallus

text: Retinal pigment epithelium

text: ATAC-Seq E5 6hPR+FGF2 2

text: 6hPR + FGF2


text: Biology, Miami University

text: live

text: Generic

text: Gallus gallus

text: Retinal pigment epithelium

text: ATAC-Seq E5 6hPR+FGF2 1

text: 6hPR + FGF2


text: Biology, Miami University

text: live

text: Generic

text: Gallus gallus

text: Retinal pigment epithelium

text: ATAC-Seq E5 RPE 2

text: Development


text: Biology, Miami University

text: live

text: Generic

text: Gallus gallus

text: Retinal pigment epithelium

text: ATAC-Seq E5 RPE 1

text: Development


text: Biology, Miami University

text: live

text: Generic

text: Gallus gallus

text: Retinal pigment epithelium

text: ATAC-Seq E4 6hPR+FGF2 2

text: 6hPR + FGF2


text: Biology, Miami University

text: live

text: Generic

text: Gallus gallus

text: Retinal pigment epithelium

text: ATAC-Seq E4 6hPR+FGF2 1

text: 6hPR + FGF2


text: Biology, Miami University

text: live

text: Generic

text: Gallus gallus

text: Retinal pigment epithelium

text: ATAC-Seq E4 RPE 2

text: Development


text: Biology, Miami University

text: live

text: Generic

text: Gallus gallus

text: Retinal pigment epithelium

text: ATAC-Seq E4 RPE 1

text: Development


Fragaria chiloensis GP33

text: Oregon State University

text: live

text: Plant

text: not applicable

characteristic: age

characteristic: cultivar

text: USA: Honeyman State Park, Oregon

characteristic: isolate

text: 43.93 N 124.11 W

text: Fragaria chiloensis

text: female

text: leaf

text: Plant sample from Fragaria chiloensis


characteristic: External Id

text: Biotechnology Research Institute

text: live

text: Plant

text: missing

text: not applicable

text: 3rd-leaf -stage

text: missing

characteristic: ecotype

text: China: Beijing

text: not applicable

text: Oryza sativa

text: roliing leaf

characteristic: phenotype

text: Leaf

text: Plant sample from Oryza sativa


WT

text: Biotechnology Research Institute

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Plant

text: missing

text: not applicable

text: 3rd-leaf -stage

text: missing

text: China: Beijing

text: not applicable

text: Oryza sativa

text: Leaf

text: Plant sample from Oryza sativa


text: Sichuan Agricultural University

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: China:Luzhou

text: mouse

characteristic: host

text: Normal mouse cecum

text: 28.87 N 105.43 E

text: gut metagenome

text: biological replicate 1

characteristic: replicate

text: Metagenome or environmental sample from gut metagenome


text: Sichuan Agricultural University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: China:Luzhou

text: mouse

text: Normal mouse cecum

text: 28.87 N 105.43 E

text: gut metagenome

text: biological replicate 2


text: Sichuan Agricultural University

text: live

text: Metagenome or environmental

text: China:Luzhou

text: mouse

text: Normal mouse cecum

text: 28.87 N 105.43 E

text: gut metagenome

characteristic: organism

text: biological replicate 3

characteristic: title


text: Sichuan Agricultural University

text: live

text: Metagenome or environmental

text: China:Luzhou

text: mouse

text: Normal mouse cecum

text: 28.87 N 105.43 E

text: gut metagenome

text: biological replicate 4


text: Sichuan Agricultural University

text: live

text: Metagenome or environmental

text: China:Luzhou

text: mouse

text: Normal mouse cecum

text: 28.87 N 105.43 E

text: gut metagenome

text: biological replicate 5


text: Sichuan Agricultural University

text: live

text: Metagenome or environmental

text: China:Luzhou

text: mouse

text: Normal mouse cecum

text: 28.87 N 105.43 E

text: gut metagenome

text: biological replicate 6


text: Sichuan Agricultural University

text: live

text: Metagenome or environmental

text: China:Luzhou

text: mouse

text: Normal mouse cecum

text: 28.87 N 105.43 E

text: gut metagenome

text: biological replicate 7


text: Sichuan Agricultural University

text: live

text: Metagenome or environmental

text: China:Luzhou

text: mouse

text: Normal mouse cecum

text: 28.87 N 105.43 E

text: gut metagenome

text: biological replicate 8


text: Sichuan Agricultural University

text: live

text: Metagenome or environmental

text: China:Luzhou

text: mouse

text: Normal mouse cecum

text: 28.87 N 105.43 E

text: gut metagenome

text: biological replicate 9


text: Sichuan Agricultural University

text: live

text: Metagenome or environmental

text: China:Luzhou

text: mouse

text: Normal mouse cecum

text: 28.87 N 105.43 E

text: gut metagenome

text: biological replicate 10


text: Sichuan Agricultural University

text: live

text: Metagenome or environmental

text: China:Luzhou

text: mouse

text: NAFLD mouse cecum

text: 28.87 N 105.43 E

text: gut metagenome

text: biological replicate 1


text: Sichuan Agricultural University

text: live

text: Metagenome or environmental

text: China:Luzhou

text: mouse

text: NAFLD mouse cecum

text: 28.87 N 105.43 E

text: gut metagenome

text: biological replicate 2


text: Sichuan Agricultural University

text: live

text: Metagenome or environmental

text: China:Luzhou

text: mouse

text: NAFLD mouse cecum

text: 28.87 N 105.43 E

text: gut metagenome

text: biological replicate 3


text: Sichuan Agricultural University

text: live

text: Metagenome or environmental

text: China:Luzhou

text: mouse

text: NAFLD mouse cecum

text: 28.87 N 105.43 E

text: gut metagenome

text: biological replicate 4


text: Sichuan Agricultural University

text: live

text: Metagenome or environmental

text: China:Luzhou

text: mouse

text: NAFLD mouse cecum

text: 28.87 N 105.43 E

text: gut metagenome

text: biological replicate 5


text: Sichuan Agricultural University

text: live

text: Metagenome or environmental

text: China:Luzhou

text: mouse

text: NAFLD mouse cecum

text: 28.87 N 105.43 E

text: gut metagenome

text: biological replicate 6


text: Sichuan Agricultural University

text: live

text: Metagenome or environmental

text: China:Luzhou

text: mouse

text: NAFLD mouse cecum

text: 28.87 N 105.43 E

text: gut metagenome

text: biological replicate 7


text: Sichuan Agricultural University

text: live

text: Metagenome or environmental

text: China:Luzhou

text: mouse

text: NAFLD mouse cecum

text: 28.87 N 105.43 E

text: gut metagenome

text: biological replicate 8


text: Sichuan Agricultural University

text: live

text: Metagenome or environmental

text: China:Luzhou

text: mouse

text: NAFLD mouse cecum

text: 28.87 N 105.43 E

text: gut metagenome

text: biological replicate 9


text: Sichuan Agricultural University

text: live

text: Metagenome or environmental

text: China:Luzhou

text: mouse

text: NAFLD mouse cecum

text: 28.87 N 105.43 E

text: gut metagenome

text: biological replicate 10


text: Pu lab, Cardiology, Boston Children's Hospital

text: live

text: Generic

text: cardiomyocyte

characteristic: cell type

text: 4 week old

characteristic: devolopment stage

text: Mus musculus

text: primary cardiomyocyte

characteristic: treatment


characteristic: External Id

text: live

text: Generic

text: cardiomyocyte

text: 4 week old

text: Mus musculus

text: primary cardiomyocyte

text: AAV-GFP


text: QINGDAO SINO-CELL BIOMED CO., LTD.

text: live

text: Generic

text: Homo sapiens

text: cell culture supernatant

characteristic: sample type

text: Exosome

characteristic: time


text: Massachusetts Institute of Techonology

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: 0.5mM vanillate

characteristic: agent

text: antiFLAG

characteristic: antibody

text: CB15N I-SceI, tet at ccna_00727; Pvan-I SceI, chl at Van locus, hfaB::PdidA-lacZ (markerless); driD::driD-3xFlag

characteristic: genotype

text: mixed population, mid-exponential phase

characteristic: growth phase

text: Caulobacter vibrioides CB15

text: Caulobacter crecentus CB15N

characteristic: substrain

text: LaubLab_ChIPseq_antiFLAG_driD-3xFlag_plusvan


text: Massachusetts Institute of Techonology

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: antiFLAG

text: mixed population, mid-exponential phase

text: Caulobacter vibrioides CB15

text: Caulobacter crecentus CB15N

text: LaubLab_ChIPseq_antiFLAG_driD-3xFlag_minusvan


text: Massachusetts Institute of Techonology

text: live

text: Generic

characteristic: SRA accession

text: 15ug/mL zeocin

text: antiFLAG

text: CB15N driD::driD-3xFlag

text: mixed population, mid-exponential phase

text: Caulobacter vibrioides CB15

characteristic: organism

text: Caulobacter crecentus CB15N

text: LaubLab_ChIPseq_antiFLAG_driD-3xFlag_pluszeo

characteristic: title


characteristic: External Id

text: Massachusetts Institute of Techonology

text: live

text: Generic

text: antiFLAG

text: CB15N driD::driD-3xFlag

text: mixed population, mid-exponential phase

text: Caulobacter vibrioides CB15

text: Caulobacter crecentus CB15N

text: LaubLab_ChIPseq_antiFLAG_driD-3xFlag_minuszeo


text: Massachusetts Institute of Techonology

text: live

text: Generic

text: 15ug/mL zeocin

text: antiFLAG

text: wildtype

text: mixed population, mid-exponential phase

text: Caulobacter vibrioides CB15

text: Caulobacter crecentus CB15N


text: Massachusetts Institute of Techonology

text: live

text: Generic

text: antiFLAG

text: wildtype

text: mixed population, mid-exponential phase

text: Caulobacter vibrioides CB15

text: Caulobacter crecentus CB15N


text: Stanford University

text: live

text: Generic

text: LCMV Armstrong

characteristic: infection

text: Mus musculus

text: I-Ab-LCMV-gp66 tetramer-

characteristic: sorted population

text: spleen

characteristic: strain

text: 8 dpi

characteristic: timepoint


text: Stanford University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: LCMV Armstrong

text: Mus musculus

text: I-Ab-LCMV-gp66 tetramer+

text: spleen

text: 8 dpi


text: Stanford University

text: live

text: Generic

text: LCMV clone 13

text: Mus musculus

text: I-Ab-LCMV-gp66 tetramer-

text: spleen

text: 8 dpi


text: Stanford University

text: live

text: Generic

text: LCMV clone 13

text: Mus musculus

text: I-Ab-LCMV-gp66 tetramer+

text: spleen

text: 8 dpi


text: Stanford University

text: live

text: Generic

text: LCMV clone 13

text: Mus musculus

text: I-Ab-LCMV-gp66 tetramer+

text: spleen

text: 21 dpi


text: Stanford University

text: live

text: Generic

text: LCMV clone 13

text: Mus musculus

text: I-Ab-LCMV-gp66 tetramer-

text: spleen

text: 21 dpi


text: Stanford University

text: live

text: Generic

text: LCMV Armstrong

text: Mus musculus

text: I-Ab-LCMV-gp66 tetramer+

text: spleen

text: 21 dpi


text: Stanford University

text: live

text: Generic

text: LCMV Armstrong

text: Mus musculus

text: I-Ab-LCMV-gp66 tetramer-

text: spleen

text: 21 dpi


text: Tsinghua University

text: live

text: Generic

characteristic: cell line

text: 18 days

characteristic: cultured time

text: Homo sapiens

text: treatment

characteristic: treatment


text: Tsinghua University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Homo sapiens

text: control


text: CRCL

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Mouse embryonic fibroblast (MEF)

characteristic: cell line/type

text: mouse AM-Tag (active motif 9111)

characteristic: chip antibody

text: Mus musculus

text: MEF cells

text: MEF cells - AM-Atoh8_rep2

text: untreated


text: CRCL

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Mouse embryonic fibroblast (MEF)

text: mouse AM-Tag (active motif 9111)

text: Mus musculus

characteristic: organism

text: MEF cells

text: MEF cells - AM-empty_rep2

characteristic: title

text: untreated


characteristic: External Id

text: CRCL

text: live

text: Generic

text: Mouse embryonic fibroblast (MEF)

text: whole cell extract

text: Mus musculus

text: MEF cells

text: MEF cells - input DNA_rep2

text: untreated


text: CRCL

text: live

text: Generic

text: Mouse embryonic fibroblast (MEF)

text: ab18465 (abcam) and A300-385A (Bethyl Laboratories)

text: Mus musculus

text: MEF cells

text: MEF cells - Bcl11b_rep2

text: untreated


text: CRCL

text: live

text: Generic

text: Mouse embryonic fibroblast (MEF)

text: Mus musculus

text: MEF cells

text: MEF cells - Bcl11b_rep1

text: untreated


text: CRCL

text: live

text: Generic

text: Mouse embryonic fibroblast (MEF)

text: whole cell extract

text: Mus musculus

text: MEF cells

text: MEF cells - input DNA_rep3

text: untreated


text: The Second Affiliated Hospital, Zhejiang University School of Medicine

text: live

text: Generic

characteristic: genotype

text: Mus musculus

text: Macrophage line RAW264.7

text: BALB/c

characteristic: strain


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: wild type

text: Mus musculus

text: Macrophage line RAW264.7

text: BALB/c


text: Qingdao Agricultural University

text: live

text: Plant

text: not collected

characteristic: age

text: Lu Hehong

characteristic: cultivar

text: China:Qingdao

text: Paeonia suffruticosa

text: flowerbud

characteristic: tissue

text: Plant sample from Paeonia suffruticosa


text: Matridx

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: China

text: Homo sapiens

characteristic: host

text: 31 N 121 E

text: metagenome

text: Metagenome or environmental sample from metagenome


text: Chair for Clinical Bioinformatics, Center for Bioinformatics, Saarland University

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: male

characteristic: Sex

text: Aged

text: Nucleus

characteristic: cell compartment

text: OPC

characteristic: cell type

characteristic: experiment batch

text: RNA-seq

characteristic: experiment type

text: Control

characteristic: experimental group

text: Mus musculus

text: Aged mouse CSF

characteristic: specimen

characteristic: timepoint

text: Hippocampus

text: Aged OPCs Aged CSF 16hr sample 4


characteristic: External Id

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: male

text: Aged

text: Nucleus

text: OPC

text: RNA-seq

text: Control

text: Mus musculus

characteristic: organism

text: Aged mouse CSF

text: Hippocampus

text: Aged OPCs Aged CSF 16hr sample 3

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Generic

text: male

text: Aged

characteristic: age

text: Nucleus

text: OPC

text: RNA-seq

text: Treatment

text: Mus musculus

text: Young mouse CSF

text: Hippocampus

characteristic: tissue

text: Aged OPCs Young CSF 16hr sample 4


text: live

text: Generic

characteristic: NCBI submission model

text: male

characteristic: Sex

text: Aged

text: Nucleus

characteristic: cell compartment

text: OPC

characteristic: cell type

characteristic: experiment batch

text: RNA-seq

text: Treatment

text: Mus musculus

text: Young mouse CSF

text: Hippocampus

text: Aged OPCs Young CSF 16hr sample 3


characteristic: External Id

text: live

text: Generic

text: male

text: Aged

text: Nucleus

text: OPC

text: RNA-seq

characteristic: experiment type

text: Control

characteristic: experimental group

text: Mus musculus

text: Artificial CSF

characteristic: specimen

characteristic: timepoint

text: Hippocampus

text: Aged OPCs Artificial CSF 16hr sample 3


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: male

text: Aged

text: Nucleus

text: OPC

text: RNA-seq

text: Control

text: Mus musculus

characteristic: organism

text: Artificial CSF

text: Hippocampus

text: Aged OPCs Artificial CSF 16hr sample 2


characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Generic

text: male

text: Aged

characteristic: age

text: Nucleus

text: OPC

text: RNA-seq

text: Control

text: Mus musculus

text: Aged mouse CSF

text: Hippocampus

text: Aged OPCs Aged CSF 16hr sample 2

characteristic: title


text: live

text: Generic

characteristic: NCBI submission model

text: male

characteristic: Sex

text: Aged

text: Nucleus

characteristic: cell compartment

text: OPC

characteristic: cell type

text: RNA-seq

text: Control

text: Mus musculus

text: Aged mouse CSF

text: Hippocampus

characteristic: tissue

text: Aged OPCs Aged CSF 16hr sample 1


characteristic: External Id

text: live

text: Generic

text: male

text: Aged

text: Nucleus

text: OPC

characteristic: experiment batch

text: RNA-seq

characteristic: experiment type

text: Treatment

characteristic: experimental group

text: Mus musculus

text: Young mouse CSF

characteristic: specimen

text: Hippocampus

text: Aged OPCs Young CSF 16hr sample 2


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: male

text: Aged

text: Nucleus

text: OPC

text: RNA-seq

text: Treatment

text: Mus musculus

text: Young mouse CSF

characteristic: timepoint

text: Hippocampus

text: Aged OPCs Young CSF 16hr sample 1


characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Generic

text: male

text: Aged

characteristic: age

text: Nucleus

text: OPC

text: RNA-seq

text: Control

text: Mus musculus

characteristic: organism

text: Artificial CSF

text: Hippocampus

text: Aged OPCs Artificial CSF 16hr sample 1


text: live

text: Generic

characteristic: NCBI submission model

text: male

characteristic: Sex

text: Aged

text: Nucleus

characteristic: cell compartment

text: OL

characteristic: cell type

text: RNA-seq

text: Treatment

text: Mus musculus

text: Hippocampus

text: Young mouse CSF

text: Hippocampus

text: Aged OLs Young CSF 6hr sample 4

characteristic: title


characteristic: External Id

text: live

text: Generic

text: male

text: Aged

text: Nucleus

text: OL

characteristic: experiment batch

text: RNA-seq

characteristic: experiment type

text: Treatment

characteristic: experimental group

text: Mus musculus

text: Hippocampus

text: Young mouse CSF

text: Hippocampus

characteristic: tissue

text: Aged OLs Young CSF 6hr sample 3


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: male

text: Aged

text: Nucleus

text: OL

text: RNA-seq

text: Treatment

text: Mus musculus

text: Hippocampus

text: Young mouse CSF

characteristic: specimen

text: Hippocampus

text: Aged OLs Young CSF 6hr sample 2


characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Generic

text: male

text: Aged

characteristic: age

text: Nucleus

text: OL

text: RNA-seq

text: Treatment

text: Mus musculus

text: Hippocampus

text: Young mouse CSF

characteristic: timepoint

text: Hippocampus

text: Aged OLs Young CSF 6hr sample 1


text: live

text: Generic

characteristic: NCBI submission model

text: male

characteristic: Sex

text: Aged

text: Nucleus

characteristic: cell compartment

text: OL

characteristic: cell type

text: RNA-seq

text: Control

text: Mus musculus

characteristic: organism

text: Hippocampus

text: Artificial CSF

text: Hippocampus

text: Aged OLs Artificial CSF 6hr sample 4


characteristic: External Id

text: live

text: Generic

text: male

text: Aged

text: Nucleus

text: OL

characteristic: experiment batch

text: RNA-seq

characteristic: experiment type

text: Control

characteristic: experimental group

text: Mus musculus

text: Hippocampus

text: Artificial CSF

text: Hippocampus

text: Aged OLs Artificial CSF 6hr sample 3

characteristic: title


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: male

text: Aged

text: Nucleus

text: OL

text: RNA-seq

text: Control

text: Mus musculus

text: Hippocampus

text: Artificial CSF

text: Hippocampus

characteristic: tissue

text: Aged OLs Artificial CSF 6hr sample 2


characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Generic

text: male

text: Aged

characteristic: age

text: Nucleus

text: OL

text: RNA-seq

text: Control

text: Mus musculus

text: Hippocampus

text: Artificial CSF

characteristic: specimen

text: Hippocampus

text: Aged OLs Artificial CSF 6hr sample 1


text: live

text: Generic

characteristic: NCBI submission model

text: male

characteristic: Sex

text: Aged

text: Nucleus

characteristic: cell compartment

text: OL

characteristic: cell type

text: RNA-seq

text: Treatment

text: Mus musculus

text: Hippocampus

text: Young mouse CSF

characteristic: timepoint

text: Hippocampus

text: Aged OLs Young CSF 1hr sample 4


characteristic: External Id

text: live

text: Generic

text: male

text: Aged

text: Nucleus

text: OL

characteristic: experiment batch

text: RNA-seq

characteristic: experiment type

text: Treatment

characteristic: experimental group

text: Mus musculus

characteristic: organism

text: Hippocampus

text: Young mouse CSF

text: Hippocampus

text: Aged OLs Young CSF 1hr sample 3


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: male

text: Aged

text: Nucleus

text: OL

text: RNA-seq

text: Treatment

text: Mus musculus

text: Hippocampus

text: Young mouse CSF

text: Hippocampus

text: Aged OLs Young CSF 1hr sample 2

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Generic

text: male

text: Aged

characteristic: age

text: Nucleus

text: OL

text: RNA-seq

text: Treatment

text: Mus musculus

text: Hippocampus

text: Young mouse CSF

text: Hippocampus

characteristic: tissue

text: Aged OLs Young CSF 1hr sample 1


text: live

text: Generic

characteristic: NCBI submission model

text: male

characteristic: Sex

text: Aged

text: Nucleus

characteristic: cell compartment

text: OL

characteristic: cell type

text: RNA-seq

text: Control

text: Mus musculus

text: Hippocampus

text: Artificial CSF

characteristic: specimen

text: Hippocampus

text: Aged OLs Artificial CSF 1hr sample 4


characteristic: External Id

text: live

text: Generic

text: male

text: Aged

text: Nucleus

text: OL

characteristic: experiment batch

text: RNA-seq

characteristic: experiment type

text: Control

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text: Aged OLs Artificial CSF 1hr sample 3


characteristic: INSDC last update

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text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: male

text: Aged

text: Nucleus

text: OL

text: RNA-seq

text: Control

text: Mus musculus

characteristic: organism

text: Hippocampus

text: Artificial CSF

text: Hippocampus

text: Aged OLs Artificial CSF 1hr sample 2


characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Generic

text: male

text: Aged

characteristic: age

text: Nucleus

text: OL

text: RNA-seq

text: Control

text: Mus musculus

text: Hippocampus

text: Artificial CSF

text: Hippocampus

text: Aged OLs Artificial CSF 1hr sample 1

characteristic: title


text: live

text: Generic

characteristic: NCBI submission model

text: male

characteristic: Sex

text: Aged

text: Nucleus

characteristic: cell compartment

text: OPC

characteristic: cell type

text: RNA-seq

text: Treatment

text: Mus musculus

text: Hippocampus

text: Young mouse CSF

text: Hippocampus

characteristic: tissue

text: Aged OPCs Young CSF 6hr sample 4


characteristic: External Id

text: live

text: Generic

text: male

text: Aged

text: Nucleus

text: OPC

characteristic: experiment batch

text: RNA-seq

characteristic: experiment type

text: Treatment

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text: Mus musculus

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characteristic: specimen

text: Hippocampus

text: Aged OPCs Young CSF 6hr sample 3


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: male

text: Aged

text: Nucleus

text: OPC

text: RNA-seq

text: Treatment

text: Mus musculus

text: Hippocampus

text: Young mouse CSF

characteristic: timepoint

text: Hippocampus

text: Aged OPCs Young CSF 6hr sample 2


characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Generic

text: male

text: Aged

characteristic: age

text: Nucleus

text: OPC

text: RNA-seq

text: Treatment

text: Mus musculus

characteristic: organism

text: Hippocampus

text: Young mouse CSF

text: Hippocampus

text: Aged OPCs Young CSF 6hr sample 1


text: live

text: Generic

characteristic: NCBI submission model

text: male

characteristic: Sex

text: Aged

text: Nucleus

characteristic: cell compartment

text: OPC

characteristic: cell type

text: RNA-seq

text: Control

text: Mus musculus

text: Hippocampus

text: Artificial CSF

text: Hippocampus

text: Aged OPCs Artificial CSF 6hr sample 4

characteristic: title


characteristic: External Id

text: live

text: Generic

text: male

text: Aged

text: Nucleus

text: OPC

characteristic: experiment batch

text: RNA-seq

characteristic: experiment type

text: Control

characteristic: experimental group

text: Mus musculus

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text: Hippocampus

characteristic: tissue

text: Aged OPCs Artificial CSF 6hr sample 3


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: male

text: Aged

text: Nucleus

text: OPC

text: RNA-seq

text: Control

text: Mus musculus

text: Hippocampus

text: Artificial CSF

characteristic: specimen

text: Hippocampus

text: Aged OPCs Artificial CSF 6hr sample 2


characteristic: INSDC center name

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text: live

characteristic: INSDC status

text: Generic

text: male

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characteristic: age

text: Nucleus

text: OPC

text: RNA-seq

text: Control

text: Mus musculus

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text: Artificial CSF

characteristic: timepoint

text: Hippocampus

text: Aged OPCs Artificial CSF 6hr sample 1


text: live

text: Generic

characteristic: NCBI submission model

text: male

characteristic: Sex

text: Aged

text: Nucleus

characteristic: cell compartment

text: OPC

characteristic: cell type

text: RNA-seq

text: Treatment

text: Mus musculus

characteristic: organism

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text: Hippocampus

text: Aged OPCs Young CSF 1hr sample 4


characteristic: External Id

text: live

text: Generic

text: male

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text: Nucleus

text: OPC

characteristic: experiment batch

text: RNA-seq

characteristic: experiment type

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characteristic: INSDC last update

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characteristic: NCBI submission package

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text: male

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characteristic: INSDC center name

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text: live

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text: male

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characteristic: age

text: Nucleus

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text: Hippocampus

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text: live

text: Generic

characteristic: NCBI submission model

text: male

characteristic: Sex

text: Aged

text: Nucleus

characteristic: cell compartment

text: OPC

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text: RNA-seq

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text: Mus musculus

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text: Artificial CSF

characteristic: timepoint

text: Hippocampus

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characteristic: External Id

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text: Generic

text: male

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text: Nucleus

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characteristic: experiment batch

text: RNA-seq

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text: Mus musculus

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text: Aged OPCs Artificial CSF 1hr sample 3


characteristic: INSDC last update

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text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: male

text: Aged

text: Nucleus

text: OPC

text: RNA-seq

text: Control

text: Mus musculus

text: Hippocampus

text: Artificial CSF

text: Hippocampus

text: Aged OPCs Artificial CSF 1hr sample 2

characteristic: title


characteristic: INSDC center name

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text: live

characteristic: INSDC status

text: Generic

text: male

text: Aged

characteristic: age

text: Nucleus

text: OPC

text: RNA-seq

text: Control

text: Mus musculus

text: Hippocampus

text: Artificial CSF

text: Hippocampus

characteristic: tissue

text: Aged OPCs Artificial CSF 1hr sample 1


text: live

text: Generic

characteristic: NCBI submission model

text: male

characteristic: Sex

text: Aged

text: Nucleus

characteristic: cell compartment

text: OL

characteristic: cell type

text: RNA-seq

text: Treatment

text: Mus musculus

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characteristic: specimen

text: Hippocampus

text: Aged OLs sample 3


characteristic: External Id

text: live

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text: male

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text: Nucleus

text: OL

characteristic: experiment batch

text: RNA-seq

characteristic: experiment type

text: Treatment

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characteristic: INSDC last update

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characteristic: NCBI submission package

characteristic: SRA accession

text: male

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text: Nucleus

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text: RNA-seq

text: Treatment

text: Mus musculus

characteristic: organism

text: Hippocampus

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text: Aged OLs sample 1


characteristic: INSDC center name

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text: live

characteristic: INSDC status

text: Generic

text: male

text: Young

characteristic: age

text: Nucleus

text: OL

text: RNA-seq

text: Control

text: Mus musculus

text: Hippocampus

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characteristic: title


text: live

text: Generic

characteristic: NCBI submission model

text: male

characteristic: Sex

text: Young

text: Nucleus

characteristic: cell compartment

text: OL

characteristic: cell type

text: RNA-seq

text: Control

text: Mus musculus

text: Hippocampus

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characteristic: tissue

text: Young OLs sample 3


characteristic: External Id

text: live

text: Generic

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text: Nucleus

text: OL

characteristic: experiment batch

text: RNA-seq

characteristic: experiment type

text: Control

characteristic: experimental group

text: Mus musculus

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characteristic: specimen

text: Hippocampus

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characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: male

text: Young

text: Nucleus

text: OL

text: RNA-seq

text: Control

text: Mus musculus

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characteristic: timepoint

text: Hippocampus

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characteristic: INSDC center name

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text: Nucleus

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text: Mus musculus

characteristic: organism

text: Hippocampus

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text: live

text: Generic

characteristic: NCBI submission model

text: male

characteristic: Sex

text: Aged

text: Nucleus

characteristic: cell compartment

text: OPC

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text: RNA-seq

text: Treatment

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characteristic: title


characteristic: External Id

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text: Nucleus

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characteristic: experiment batch

text: RNA-seq

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characteristic: NCBI submission package

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characteristic: cell compartment

text: OPC

characteristic: cell type

text: RNA-seq

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text: Mus musculus

characteristic: organism

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characteristic: External Id

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text: OPC

characteristic: experiment batch

text: RNA-seq

characteristic: experiment type

text: Control

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text: Young OPCs sample 1


characteristic: INSDC center name

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text: Whole cell

text: OPC

text: SLAM-seq

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text: Rattus norvegicus

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text: Young human CSF

characteristic: specimen

text: Young CSF 6hr sample 5


text: live

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characteristic: NCBI submission model

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characteristic: Sex

text: Whole cell

characteristic: cell compartment

text: OPC

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text: SLAM-seq

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text: Rattus norvegicus

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characteristic: External Id

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characteristic: experiment batch

text: SLAM-seq

characteristic: experiment type

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text: Young CSF 6hr sample 3


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characteristic: NCBI submission package

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text: male

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characteristic: INSDC center name

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characteristic: INSDC status

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text: male

characteristic: age

text: Whole cell

text: OPC

text: SLAM-seq

text: Treatment

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text: live

text: Generic

characteristic: NCBI submission model

text: male

characteristic: Sex

text: Whole cell

characteristic: cell compartment

text: OPC

text: SLAM-seq

text: Control

text: Rattus norvegicus

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text: Artificial CSF

characteristic: specimen

text: Artificial CSF 6hr sample 5