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text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-CDCBI-CRSP_MVHWDHYTKBCD3FZL/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)

text: Pathogen: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-CDCBI-CRSP_MHSYRLQNHLEDFGST/2022

text: clinical

text: missing

text: Severe acute respiratory syndrome coronavirus 2

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: Broad Institute Genomic Center for Infectious Diseases

text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-CDCBI-CRSP_JVWW7FJNX3VMRVDF/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: Broad Institute Clinical Research Sequencing Platform

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-CDCBI-CRSP_JQHPHC6SCZK47626/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-CDCBI-CRSP_IHMMTA7USWUERTYN/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-CDCBI-CRSP_I64XWRTIT3MPL7GE/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-CDCBI-CRSP_GXGAPWQGWOIZJZY7/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-CDCBI-CRSP_G3N2ITGY43QRBCJI/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-CDCBI-CRSP_EXUJKBUO2ZPMZWXP/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-CDCBI-CRSP_EPYHXJCN7353N4II/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-CDCBI-CRSP_EP4QROW2BODSHFIV/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-CDCBI-CRSP_ENSXIEY3WZHNSR3Z/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-CDCBI-CRSP_ELL67C45EG2JUCJH/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-CDCBI-CRSP_EEC5NL2JF5H74JKQ/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-CDCBI-CRSP_DHLDQ5Q57GFIIDDN/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)

text: Pathogen: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-CDCBI-CRSP_DCDFTUIGZIVLQUFU/2022

text: clinical

text: missing

text: Severe acute respiratory syndrome coronavirus 2

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: Broad Institute Genomic Center for Infectious Diseases

text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-CDCBI-CRSP_A26NIKJAJJIV4MQD/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: Broad Institute Clinical Research Sequencing Platform

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-CDCBI-CRSP_7VEUXWZB3LBFPI4A/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-CDCBI-CRSP_7PKZ3HC6UKMCYNYV/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-CDCBI-CRSP_6IF3DSFYMAOSOL7M/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-CDCBI-CRSP_3XT2YHMUMAP6QTEA/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-CDCBI-CRSP_3S6AYKCOSOZ4QXFU/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-CDCBI-CRSP_3ERAUXLOUHWJGSZY/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: Hunan University Of Chinese Medicine

text: live

text: Metagenome or environmental

text: China: Changsha

text: mouse

text: not collected

text: mouse gut metagenome

text: Metagenome or environmental sample from mouse gut metagenome


text: Hunan University Of Chinese Medicine

text: live

text: Metagenome or environmental

text: China: Changsha

text: mouse

text: not collected

text: mouse gut metagenome


text: Chinese Academy of Agricultural Sciences

text: live

text: Plant

text: not applicable

characteristic: age

text: not applicable

text: China

text: Auxenochlorella pyrenoidosa

text: Cell

characteristic: tissue

text: Plant sample from Auxenochlorella pyrenoidosa

text: AZD

characteristic: treatment


text: live

text: Plant

text: not applicable

text: not applicable

text: China

text: Auxenochlorella pyrenoidosa

text: Cell

text: DMSO


text: AIT Austrian Institute of Technology

text: live

text: Pathogen.cl

text: Bedenic

text: Croatia: Dubrovnik

text: Homo sapiens

text: urinary tract infection

text: urine

text: 42.648660 N 18.098510 E

text: Klebsiella pneumoniae

characteristic: strain

text: Pathogen: clinical or host-associated sample from Klebsiella pneumoniae


characteristic: External Id

text: Zhejiang Academy of Agricultural Sciences

text: live

text: Microbe, viral or environmental

text: Zhejiang Academy of Agriculture Science

text: China:Jinhua

text: swine

text: fecal swab

text: Proteus mirabilis

text: pure culture

text: Microbe sample from Proteus mirabilis


characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: Zhejiang Academy of Agriculture Science

text: China:Hangzhou

text: swine

text: fecal swab

text: Proteus mirabilis

text: pure culture

text: Microbe sample from Proteus mirabilis


characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: Zhejiang Academy of Agriculture Science

text: China:Quzhou

text: swine

text: fecal swab

text: Proteus mirabilis

text: pure culture

text: Microbe sample from Proteus mirabilis


text: Beijing Academy of Agriculture and Forestry Sciences

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: China: Beijing

text: Beijing-You chicken

text: 40.125482 N 116.972357 E

text: chicken gut metagenome

text: Metagenome or environmental sample from chicken gut metagenome


W

text: Yichun university

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

text: not applicable

text: Swine

text: Streptococcus suis

text: cell culture

text: WT


D

text: Yichun university

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: not applicable

text: Swine

text: Streptococcus suis

text: cell culture

text: Lacd mutant


text: The Max Planck Institute of Molecular Cell Biology and Genetics

text: live

text: Model organism or animal

characteristic: NCBI submission model

text: Unknown

text: Jan Hge, Faculty of Life Sciences, Humboldt-Universitt zu Berlin, Berlin, Axel Meyer, Univeristy of Konstanz, Konstanz

text: Unknown

text: Europe

characteristic: ecotype

text: Scardinius erythrophthalmus

text: Unknown

characteristic: sex

text: Liver

text: Scardinius erythrophthalmus genome assembly