text: live

text: SARS-CoV-2: clinical or host-associated

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-ED02771/2022

text: missing

text: not applicable

text: baseline surveillance

text: Nanopore GridION


status: PUBLIC

characteristic: External Id

text: The University of New Mexico Health Sciences Center

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

tag: attribute

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

characteristic: host

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-ED02772/2022

characteristic: isolate

text: missing

characteristic: organism

text: not applicable

text: baseline surveillance

text: Center for Global Health, University of New Mexico Health Sciences Center

text: Nanopore GridION

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2

characteristic: title


text: live

text: SARS-CoV-2: clinical or host-associated

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

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text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-ED02774/2022

text: missing

text: Severe acute respiratory syndrome coronavirus 2

text: not applicable

text: baseline surveillance

text: Nanopore GridION


text: live

text: SARS-CoV-2: clinical or host-associated

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-ED02775/2022

text: missing

text: not applicable

text: baseline surveillance

text: Nanopore GridION


text: live

text: SARS-CoV-2: clinical or host-associated

text: University of New Mexico Hospital

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-ED02777/2022

text: missing

text: not applicable

text: baseline surveillance

text: Nanopore GridION


text: live

text: SARS-CoV-2: clinical or host-associated

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

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text: missing

text: not applicable

text: baseline surveillance

text: Nanopore GridION


text: live

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text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL1M2022_110/2022

text: missing

text: not applicable

text: baseline surveillance

text: Nanopore GridION


text: live

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text: Homo sapiens

text: unknown

text: not collected

text: unknown

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text: missing

text: not applicable

text: baseline surveillance

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text: not collected

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text: missing

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text: baseline surveillance

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text: not collected

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text: missing

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text: not collected

text: unknown

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text: missing

text: not applicable

text: baseline surveillance

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text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL1M2022_121/2022

text: missing

text: not applicable

text: baseline surveillance

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text: live

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text: TriCore Reference Laboratories

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text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL1M2022_122/2022

text: missing

text: not applicable

text: baseline surveillance

text: Nanopore GridION


text: live

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text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL1M2022_126/2022

text: missing

text: not applicable

text: baseline surveillance

text: Nanopore GridION


text: The University of New Mexico Health Sciences Center

text: live

text: SARS-CoV-2: clinical or host-associated

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL1M2022_127/2022

text: missing

text: not applicable

text: baseline surveillance

text: Nanopore GridION


text: live

text: SARS-CoV-2: clinical or host-associated

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL1M2022_128/2022

text: missing

text: not applicable

text: baseline surveillance

text: Center for Global Health, University of New Mexico Health Sciences Center

text: Nanopore GridION


text: live

text: SARS-CoV-2: clinical or host-associated

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL1M2022_129/2022

text: missing

text: not applicable

text: baseline surveillance

text: Nanopore GridION

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL1M2022_130/2022

text: missing

text: Severe acute respiratory syndrome coronavirus 2

text: not applicable

text: baseline surveillance

text: Nanopore GridION


text: live

text: SARS-CoV-2: clinical or host-associated

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL1M2022_131/2022

text: missing

text: not applicable

text: baseline surveillance

text: Nanopore GridION


text: live

text: SARS-CoV-2: clinical or host-associated

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL1M2022_133/2022

text: missing

text: not applicable

text: baseline surveillance

text: Nanopore GridION


text: live

text: SARS-CoV-2: clinical or host-associated

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL1M2022_134/2022

text: missing

text: not applicable

text: baseline surveillance

text: Nanopore GridION


text: live

text: SARS-CoV-2: clinical or host-associated

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL1M2022_137/2022

text: missing

text: not applicable

text: baseline surveillance

text: Nanopore GridION


text: live

text: SARS-CoV-2: clinical or host-associated

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL1M2022_139/2022

text: missing

text: not applicable

text: baseline surveillance

text: Nanopore GridION


text: live

text: SARS-CoV-2: clinical or host-associated

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL1M2022_140/2022

text: missing

text: not applicable

text: baseline surveillance

text: Nanopore GridION


text: live

text: SARS-CoV-2: clinical or host-associated

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL1M2022_142/2022

text: missing

text: not applicable

text: baseline surveillance

text: Nanopore GridION


text: live

text: SARS-CoV-2: clinical or host-associated

text: TriCore Reference Laboratories

text: USA: New Mexico

text: Homo sapiens

text: unknown

text: not collected

text: unknown

text: SARS-CoV-2/human/USA/NM-UNM-TRL1M2022_143/2022

text: missing

text: not applicable

text: baseline surveillance

text: Nanopore GridION


text: CT Public Health Laboratory submission group

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1060161001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

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text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

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text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1060331001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

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text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

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text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1060487001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

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text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Random sampling

text: Baseline Surveillance


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text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

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text: clinical

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text: Targeted Sequencing


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text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

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text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

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text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1061089001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

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text: clinical

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text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

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text: clinical

text: Random sampling

text: Baseline Surveillance


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text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

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text: clinical

text: Random sampling

text: Baseline Surveillance


text: CT Public Health Laboratory submission group

text: live

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text: USA: Connecticut

text: Homo sapiens

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text: clinical

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text: Baseline Surveillance


text: live

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text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

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text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

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text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1061556001/2022

text: clinical

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text: Targeted Sequencing


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1061557001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1061559001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1061564001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1061566001/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1061780001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1061786001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1061831001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1061939001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1061943001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1061983001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: CT Public Health Laboratory submission group

text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

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text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1060158001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1060176001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1060505001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

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text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1060512001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1060514001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1060624001/2022

text: clinical

text: Potential vaccine breakthrough

text: Targeted Sequencing

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

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text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Potential vaccine breakthrough

text: Targeted Sequencing


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1060627001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

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text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

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text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

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text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

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text: clinical

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text: Targeted Sequencing


text: CT Public Health Laboratory submission group

text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

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text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

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text: clinical

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text: USA: Connecticut

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text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

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text: clinical

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text: CT Department of Public Health

text: USA: Connecticut

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text: clinical

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text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

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text: clinical

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text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

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text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

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text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1060789001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1060791001/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1060794001/2021

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1052111001/2021

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1053528001/2021

text: clinical

text: Potential vaccine breakthrough

text: Targeted Sequencing


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1056751001/2021

text: clinical

text: Random sampling

text: Baseline Surveillance


text: CT Public Health Laboratory submission group

text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1056782001/2021

text: clinical

text: Potential vaccine breakthrough

text: Targeted Sequencing


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1057769001/2021

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1057773001/2021

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1057777001/2021

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1057826001/2021

text: clinical

text: Potential vaccine breakthrough

text: Targeted Sequencing


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1057869001/2021

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1057953001/2021

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1058162001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1058324001/2022

text: clinical

text: Potential vaccine breakthrough

text: Targeted Sequencing


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1058383001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1058433001/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059102001/2022

text: clinical

text: Potential vaccine breakthrough

text: Targeted Sequencing


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059150001/2022

text: clinical

text: Potential vaccine breakthrough

text: Targeted Sequencing


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059193001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: CT Public Health Laboratory submission group

text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059322001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059454001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059662001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059666001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059694001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059696001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.cl

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

characteristic: serovar

characteristic: strain

text: Salmonella enterica


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059078001/2022

text: clinical

text: Potential vaccine breakthrough

text: Targeted Sequencing


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059089001/2022

text: clinical

text: Potential vaccine breakthrough

text: Targeted Sequencing


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059096001/2022

text: clinical

text: Potential vaccine breakthrough

text: Targeted Sequencing


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059097001/2022

text: clinical

text: Potential vaccine breakthrough

text: Targeted Sequencing

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059099001/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Potential vaccine breakthrough

text: Targeted Sequencing


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059122001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059127001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: CT Public Health Laboratory submission group

text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059128001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059130001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059169001/2022

text: clinical

text: Potential vaccine breakthrough

text: Targeted Sequencing


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059177001/2022

text: clinical

text: Potential vaccine breakthrough

text: Targeted Sequencing


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059187001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059190001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059199001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059307001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059399001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059425001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059442001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059451001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059473001/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059651001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: CT Public Health Laboratory submission group

text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059668001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059669001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059682001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059698001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059704001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: CT Department of Public Health

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-DPH-1059715001/2022

text: clinical

text: Random sampling

text: Baseline Surveillance


text: University of South Florida

text: live

text: Metagenome or environmental

text: USA: Winston-Salem, NC

text: mouse

text: mouse feces

text: 36.099861 N 80.244217 W

text: mouse gut metagenome

text: Metagenome or environmental sample from mouse gut metagenome


text: University of South Florida

text: live

text: Metagenome or environmental

text: USA: Winston-Salem, NC

text: Homo sapiens

text: human fecal samples

text: 36.099861 N 80.244217 W

text: human gut metagenome

text: Metagenome or environmental sample from human gut metagenome


text: Genetics, Washington University in St. Louis School of Medicine

text: live

text: Generic

characteristic: cell line

text: Embryonic fibroblasts

characteristic: cell type

text: Mus musculus

text: 30 hours Dox

characteristic: sag treatment

text: Experiment2, 30 hours Dox, scRNAseq


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: Embryonic fibroblasts

text: Mus musculus

text: 19 hours Dox

text: Experiment2, 19 hours Dox, scRNAseq


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Embryonic fibroblasts

text: Mus musculus

text: 0 hours Dox

text: Experiment2, 0 hours Dox, scRNAseq


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Embryonic fibroblasts

text: Mus musculus

text: 30 hours no Dox

text: Experiment2, 30 hours no Dox, scRNAseq


text: live

text: Generic

characteristic: NCBI submission package

text: Embryonic fibroblasts

text: Mus musculus

text: 19 hours no Dox

text: Experiment2, 19 hours no Dox, scRNAseq


text: live

text: Generic

text: Embryonic fibroblasts

text: Mus musculus

text: 0 hours no Dox

text: Experiment2, 0 hours no Dox, scRNAseq


text: live

text: Generic

text: Embryonic fibroblasts

text: Mus musculus

text: 30 hours

text: Experiment1, 30 hours, scRNAseq


text: live

text: Generic

text: Embryonic fibroblasts

text: Mus musculus

text: 17 hours

text: Experiment1, 17 hours, scRNAseq


text: live

text: Generic

text: Embryonic fibroblasts

text: Mus musculus

text: 0 hours

text: Experiment1, 0 hours, scRNAseq


text: Mark Hildebrand, Scripps Institution of Oceanography, University of California San Diego

text: live

text: Generic

text: unicellular

text: Wild type

characteristic: genotype

text: Thalassiosira pseudonana CCMP1335

text: Cell culture

text: CCMP 1335

text: Cell culture

characteristic: tissue

text: T. pseudonana culture, synchrony hour 9, replicate 2

text: 9 hour silicon readdition

characteristic: treatment


characteristic: INSDC secondary accession

text: live

text: Generic

text: unicellular

text: Wild type

text: Thalassiosira pseudonana CCMP1335

characteristic: organism

text: Cell culture

text: CCMP 1335

text: Cell culture

text: T. pseudonana culture, synchrony hour 9, replicate 1

characteristic: title

text: 9 hour silicon readdition


text: live

text: Generic

characteristic: SRA accession

text: unicellular

text: Wild type

text: Thalassiosira pseudonana CCMP1335

text: Cell culture

text: CCMP 1335

characteristic: strain

text: Cell culture

text: T. pseudonana culture, synchrony hour 8, replicate 2

text: 8 hour silicon readdition


text: live

text: Generic

text: unicellular

characteristic: cell type

text: Wild type

text: Thalassiosira pseudonana CCMP1335

text: Cell culture

text: CCMP 1335

text: Cell culture

text: T. pseudonana culture, synchrony hour 8, replicate 1

text: 8 hour silicon readdition


text: live

text: Generic

text: unicellular

text: Wild type

text: Thalassiosira pseudonana CCMP1335

text: Cell culture

text: CCMP 1335

text: Cell culture

text: T. pseudonana culture, synchrony hour 7, replicate 2

text: 7 hour silicon readdition


text: live

text: Generic

text: unicellular

text: Wild type

text: Thalassiosira pseudonana CCMP1335

text: Cell culture

text: CCMP 1335

text: Cell culture

text: T. pseudonana culture, synchrony hour 7, replicate 1

text: 7 hour silicon readdition


text: live

text: Generic

text: unicellular

text: Wild type

text: Thalassiosira pseudonana CCMP1335

text: Cell culture

text: CCMP 1335

text: Cell culture

text: T. pseudonana culture, synchrony hour 6, replicate 2

text: 6 hour silicon readdition


text: live

text: Generic

text: unicellular

text: Wild type

text: Thalassiosira pseudonana CCMP1335

text: Cell culture

text: CCMP 1335

text: Cell culture

text: T. pseudonana culture, synchrony hour 6, replicate 1

text: 6 hour silicon readdition


text: live

text: Generic

text: unicellular

text: Wild type

text: Thalassiosira pseudonana CCMP1335

text: Cell culture

text: CCMP 1335

text: Cell culture

text: T. pseudonana culture, synchrony hour 5, replicate 2

text: 5 hour silicon readdition


text: live

text: Generic

text: unicellular

text: Wild type

text: Thalassiosira pseudonana CCMP1335

text: Cell culture

text: CCMP 1335

text: Cell culture

text: T. pseudonana culture, synchrony hour 5, replicate 1

text: 5 hour silicon readdition


text: live

text: Generic

text: unicellular

text: Wild type

text: Thalassiosira pseudonana CCMP1335

text: Cell culture

text: CCMP 1335

text: Cell culture

text: T. pseudonana culture, synchrony hour 4, replicate 2

text: 4 hour silicon readdition


text: live

text: Generic

text: unicellular

text: Wild type

text: Thalassiosira pseudonana CCMP1335

text: Cell culture

text: CCMP 1335

text: Cell culture

text: T. pseudonana culture, synchrony hour 4, replicate 1

text: 4 hour silicon readdition


text: live

text: Generic

text: unicellular

text: Wild type

text: Thalassiosira pseudonana CCMP1335

text: Cell culture

text: CCMP 1335

text: Cell culture

text: T. pseudonana culture, synchrony hour 3, replicate 2

text: 3 hour silicon readdition


text: live

text: Generic

text: unicellular

text: Wild type

text: Thalassiosira pseudonana CCMP1335

text: Cell culture

text: CCMP 1335

text: Cell culture

text: T. pseudonana culture, synchrony hour 3, replicate 1

text: 3 hour silicon readdition


text: live

text: Generic

text: unicellular

text: Wild type

text: Thalassiosira pseudonana CCMP1335

text: Cell culture

text: CCMP 1335

text: Cell culture

text: T. pseudonana culture, synchrony hour 2, replicate 2

text: 2 hour silicon readdition


text: live

text: Generic

text: unicellular

text: Wild type

text: Thalassiosira pseudonana CCMP1335

text: Cell culture

text: CCMP 1335

text: Cell culture

text: T. pseudonana culture, synchrony hour 2, replicate 1

text: 2 hour silicon readdition


text: Mark Hildebrand, Scripps Institution of Oceanography, University of California San Diego

text: live

text: Generic

text: unicellular

text: Wild type

text: Thalassiosira pseudonana CCMP1335

text: Cell culture

text: CCMP 1335

text: Cell culture

text: T. pseudonana culture, synchrony hour 1, replicate 2

text: 1 hour silicon readdition


text: live

text: Generic

text: unicellular

text: Wild type

text: Thalassiosira pseudonana CCMP1335

text: Cell culture

text: CCMP 1335

text: Cell culture

text: T. pseudonana culture, synchrony hour 1, replicate 1

text: 1 hour silicon readdition


text: live

text: Generic

text: unicellular

text: Wild type

text: Thalassiosira pseudonana CCMP1335

text: Cell culture

text: CCMP 1335

text: Cell culture

text: T. pseudonana culture, synchrony hour 0, replicate 2

text: 0 hour silicon readdition


text: live

text: Generic

text: unicellular

text: Wild type

text: Thalassiosira pseudonana CCMP1335

text: Cell culture

text: CCMP 1335

text: Cell culture

text: T. pseudonana culture, synchrony hour 0, replicate 1

text: 0 hour silicon readdition


text: Idaho Bureau of Laboratories

text: live

text: SARS-CoV-2: clinical or host-associated

text: Idaho Bureau of Laboratories

text: USA: Idaho

text: Homo sapiens

characteristic: host

characteristic: isolate

text: patient isolate

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


characteristic: External Id

text: Idaho Bureau of Laboratories

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: Idaho Bureau of Laboratories

text: USA: Idaho

text: Homo sapiens

text: patient isolate

text: Severe acute respiratory syndrome coronavirus 2


text: Idaho Bureau of Laboratories

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: Idaho Bureau of Laboratories

text: not applicable

text: USA: Idaho

text: Homo sapiens

text: patient isolate


text: African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: Nigeria: Osun State, Ede

text: Homo sapiens

text: stool

text: Healthy

characteristic: note

text: Klebsiella pneumoniae

text: mixed culture

text: Microbe sample from Klebsiella pneumoniae


text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: Nigeria: Osun State, Ede

text: Homo sapiens

text: stool

text: Healthy

text: Escherichia coli

text: mixed culture

text: Microbe sample from Escherichia coli


text: live

text: Microbe, viral or environmental

text: Nigeria: Osun State, Ede

text: Homo sapiens

text: stool

text: Healthy

text: Citrobacter pasteurii

text: mixed culture

text: Microbe sample from Citrobacter pasteurii


text: live

text: Microbe, viral or environmental

text: Nigeria: Osun State, Ede

text: Homo sapiens

text: stool

text: Healthy

text: Enterobacter cloacae complex sp. OE43NF

text: mixed culture

text: Microbe sample from Enterobacter cloacae complex sp. OE43NF


text: live

text: Microbe, viral or environmental

text: Nigeria: Osun State, Ede

text: Homo sapiens

text: stool

text: Healthy

text: Enterobacter kobei

text: mixed culture

text: Microbe sample from Enterobacter kobei


text: live

text: Microbe, viral or environmental

text: Nigeria: Osun State, Ede

text: Homo sapiens

text: stool

text: Healthy

text: Citrobacter freundii

text: mixed culture

text: Microbe sample from Citrobacter freundii


text: live

text: Microbe, viral or environmental

text: Nigeria: Osun State, Ede

text: Homo sapiens

text: stool

text: Healthy

text: Klebsiella quasivariicola

text: mixed culture

text: Microbe sample from Klebsiella quasivariicola


text: live

text: Microbe, viral or environmental

text: Nigeria: Osun State, Osogbo

text: Homo sapiens

text: stool

text: Healthy

text: Citrobacter youngae

text: mixed culture

text: Microbe sample from Citrobacter youngae


text: live

text: Microbe, viral or environmental

text: Nigeria: Osun State, Osogbo

text: Homo sapiens

text: stool

text: Healthy

text: Escherichia coli

text: mixed culture

text: Microbe sample from Escherichia coli


text: live

text: Microbe, viral or environmental

text: Nigeria: Osun State, Osogbo

text: Homo sapiens

text: stool

text: Healthy

text: Enterobacter hormaechei

text: mixed culture

text: Microbe sample from Enterobacter hormaechei


text: Montana Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: Montana Public Health Laboratory

text: USA: Montana

text: Homo sapiens

text: female

text: Severe acute respiratory syndrome coronavirus 2/Human/USA/MT-MTPHL-3966080/2022

text: clinical


text: Montana Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: Montana Public Health Laboratory

text: USA: Montana

text: Homo sapiens

text: male

text: Severe acute respiratory syndrome coronavirus 2/Human/USA/MT-MTPHL-3966084/2022

text: clinical


text: Montana Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: Montana Public Health Laboratory

text: USA: Montana

text: Homo sapiens

text: male

text: Severe acute respiratory syndrome coronavirus 2/Human/USA/MT-MTPHL-3966125/2022

text: clinical


text: Montana Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: Montana Public Health Laboratory

text: USA: Montana

text: Homo sapiens

text: female

text: Severe acute respiratory syndrome coronavirus 2/Human/USA/MT-MTPHL-3966128/2022

text: clinical


text: Montana Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: Montana Public Health Laboratory

text: USA: Montana

text: Homo sapiens

text: male

text: Severe acute respiratory syndrome coronavirus 2/Human/USA/MT-MTPHL-3966132/2022

text: clinical


text: Montana Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: Montana Public Health Laboratory

text: USA: Montana

text: Homo sapiens

text: female

text: Severe acute respiratory syndrome coronavirus 2/Human/USA/MT-MTPHL-3966127/2022

text: clinical


text: Montana Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: Montana Public Health Laboratory

text: USA: Montana

text: Homo sapiens

text: female

text: Severe acute respiratory syndrome coronavirus 2/Human/USA/MT-MTPHL-3966122/2022

text: clinical


text: Montana Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: Montana Public Health Laboratory

text: USA: Montana

text: Homo sapiens

text: male

text: Severe acute respiratory syndrome coronavirus 2/Human/USA/MT-MTPHL-3966118/2022

text: clinical


text: Montana Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: Montana Public Health Laboratory

text: USA: Montana

text: Homo sapiens

text: female

text: Severe acute respiratory syndrome coronavirus 2/Human/USA/MT-MTPHL-3966137/2022

text: clinical

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: Montana Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: Montana Public Health Laboratory

text: USA: Montana

text: Homo sapiens

text: female

text: Severe acute respiratory syndrome coronavirus 2/Human/USA/MT-MTPHL-3966129/2022

text: clinical


text: Montana Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: Montana Public Health Laboratory

text: USA: Montana

text: Homo sapiens

text: female

text: Severe acute respiratory syndrome coronavirus 2/Human/USA/MT-MTPHL-3966121/2022

text: clinical


text: Montana Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: Montana Public Health Laboratory

text: USA: Montana

text: Homo sapiens

text: male

text: Severe acute respiratory syndrome coronavirus 2/Human/USA/MT-MTPHL-3966131/2022

text: clinical


text: Montana Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: Montana Public Health Laboratory

text: USA: Montana

text: Homo sapiens

text: female

text: Severe acute respiratory syndrome coronavirus 2/Human/USA/MT-MTPHL-3966124/2022

text: clinical


text: Montana Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: Montana Public Health Laboratory

text: USA: Montana

text: Homo sapiens

text: female

text: Severe acute respiratory syndrome coronavirus 2/Human/USA/MT-MTPHL-3966120/2022

text: clinical


text: Montana Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: Montana Public Health Laboratory

text: USA: Montana

text: Homo sapiens

text: female

text: Severe acute respiratory syndrome coronavirus 2/Human/USA/MT-MTPHL-3966123/2022

text: clinical


text: Montana Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: Montana Public Health Laboratory

text: USA: Montana

text: Homo sapiens

text: female

text: Severe acute respiratory syndrome coronavirus 2/Human/USA/MT-MTPHL-3966136/2022

text: clinical


text: Montana Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: Montana Public Health Laboratory

text: USA: Montana

text: Homo sapiens

text: male

text: Severe acute respiratory syndrome coronavirus 2/Human/USA/MT-MTPHL-4014833/2022

text: clinical


text: Montana Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: Montana Public Health Laboratory

text: USA: Montana

text: Homo sapiens

text: female

text: Severe acute respiratory syndrome coronavirus 2/Human/USA/MT-MTPHL-4014834/2022

text: clinical


text: Montana Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: Montana Public Health Laboratory

text: USA: Montana

text: Homo sapiens

text: male

text: Severe acute respiratory syndrome coronavirus 2/Human/USA/MT-MTPHL-4015255/2022

text: clinical


text: Montana Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: Montana Public Health Laboratory

text: USA: Montana

text: Homo sapiens

text: female

text: Severe acute respiratory syndrome coronavirus 2/Human/USA/MT-MTPHL-4015254/2022

text: clinical


text: Montana Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: Montana Public Health Laboratory

text: USA: Montana

text: Homo sapiens

text: female

text: Severe acute respiratory syndrome coronavirus 2/Human/USA/MT-MTPHL-4015256/2022

text: clinical


text: Montana Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: Montana Public Health Laboratory

text: USA: Montana

text: Homo sapiens

text: female

text: Severe acute respiratory syndrome coronavirus 2/Human/USA/MT-MTPHL-4015676/2022

text: clinical


text: Montana Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: Montana Public Health Laboratory

text: USA: Montana

text: Homo sapiens

text: female

text: Severe acute respiratory syndrome coronavirus 2/Human/USA/MT-MTPHL-4015679/2022

text: clinical


text: Montana Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: Montana Public Health Laboratory

text: USA: Montana

text: Homo sapiens

text: male

text: Severe acute respiratory syndrome coronavirus 2/Human/USA/MT-MTPHL-4015941/2022

text: clinical


text: Montana Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: Montana Public Health Laboratory

text: USA: Montana

text: Homo sapiens

text: male

text: Severe acute respiratory syndrome coronavirus 2/Human/USA/MT-MTPHL-4015940/2022

text: clinical


text: Montana Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: Montana Public Health Laboratory

text: USA: Montana

text: Homo sapiens

text: female

text: Severe acute respiratory syndrome coronavirus 2/Human/USA/MT-MTPHL-4015683/2022

text: clinical

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: Montana Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: Montana Public Health Laboratory

text: USA: Montana

text: Homo sapiens

text: female

text: Severe acute respiratory syndrome coronavirus 2/Human/USA/MT-MTPHL-4015682/2022

text: clinical


text: Montana Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: Montana Public Health Laboratory

text: USA: Montana

text: Homo sapiens

text: female

text: Severe acute respiratory syndrome coronavirus 2/Human/USA/MT-MTPHL-4015680/2022

text: clinical


text: Montana Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: Montana Public Health Laboratory

text: USA: Montana

text: Homo sapiens

text: male

text: Severe acute respiratory syndrome coronavirus 2/Human/USA/MT-MTPHL-4015678/2022

text: clinical


text: Montana Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: Montana Public Health Laboratory

text: USA: Montana

text: Homo sapiens

text: female

text: Severe acute respiratory syndrome coronavirus 2/Human/USA/MT-MTPHL-4015681/2022

text: clinical


ADI IsletCore R444

text: University of Alberta

text: live

text: Human

characteristic: age

text: ADI IsletCore

text: Homo sapiens

text: female

characteristic: sex

text: pancreatic islets of Langerhans

characteristic: tissue

text: Human sample from Homo sapiens


text: University of Oulu

characteristic: INSDC secondary accession

text: live

text: MIMARKS.survey

text: 0-10 cm

characteristic: depth

text: Keywords: GSC:MIxS;MIMARKS:5.0

characteristic: description

text: missing

characteristic: elev

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.29 N 27.25 E

text: soil metagenome

characteristic: organism

characteristic: replicate

text: biological replicate 1

characteristic: title


characteristic: External Id

text: University of Oulu

characteristic: INSDC center name

text: live

text: MIMARKS.survey

characteristic: SRA accession

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.29 N 27.25 E

text: soil metagenome

text: biological replicate 2


text: University of Oulu

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.29 N 27.25 E

text: soil metagenome

text: biological replicate 3


text: University of Oulu

text: live

text: MIMARKS.survey

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.29 N 27.25 E

text: soil metagenome

text: biological replicate 4


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.29 N 27.25 E

text: soil metagenome

text: biological replicate 5


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.29 N 27.25 E

text: soil metagenome

text: biological replicate 6


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.29 N 27.25 E

text: soil metagenome

text: biological replicate 7


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.29 N 27.25 E

text: soil metagenome

text: biological replicate 8


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.29 N 27.25 E

text: soil metagenome

text: biological replicate 9


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.29 N 27.25 E

text: soil metagenome

text: biological replicate 10


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.29 N 27.25 E

text: soil metagenome

text: biological replicate 11


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.29 N 27.25 E

text: soil metagenome

text: biological replicate 12


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.29 N 27.25 E

text: soil metagenome

text: biological replicate 13


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.29 N 27.25 E

text: soil metagenome

text: biological replicate 14


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.29 N 27.25 E

text: soil metagenome

text: biological replicate 15


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.29 N 27.25 E

text: soil metagenome

text: biological replicate 16


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.30 N 27.28 E

text: soil metagenome

text: biological replicate 1


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.30 N 27.28 E

text: soil metagenome

text: biological replicate 2


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.30 N 27.28 E

text: soil metagenome

text: biological replicate 3


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.30 N 27.28 E

text: soil metagenome

text: biological replicate 4


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.30 N 27.28 E

text: soil metagenome

text: biological replicate 5


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.30 N 27.28 E

text: soil metagenome

text: biological replicate 6


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.30 N 27.28 E

text: soil metagenome

text: biological replicate 7


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.30 N 27.28 E

text: soil metagenome

text: biological replicate 8


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.30 N 27.28 E

text: soil metagenome

text: biological replicate 9


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.30 N 27.28 E

text: soil metagenome

text: biological replicate 10


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.30 N 27.28 E

text: soil metagenome

text: biological replicate 11


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.30 N 27.28 E

text: soil metagenome

text: biological replicate 12


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.30 N 27.28 E

text: soil metagenome

text: biological replicate 13


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.30 N 27.28 E

text: soil metagenome

text: biological replicate 14


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.30 N 27.28 E

text: soil metagenome

text: biological replicate 15


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.30 N 27.28 E

text: soil metagenome

text: biological replicate 16


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.19 N 27.35 E

text: soil metagenome

text: biological replicate 1


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.19 N 27.35 E

text: soil metagenome

text: biological replicate 2


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.19 N 27.35 E

text: soil metagenome

text: biological replicate 3


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.19 N 27.35 E

text: soil metagenome

text: biological replicate 4


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.19 N 27.35 E

text: soil metagenome

text: biological replicate 5


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.19 N 27.35 E

text: soil metagenome

text: biological replicate 6


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.19 N 27.35 E

text: soil metagenome

text: biological replicate 7


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.19 N 27.35 E

text: soil metagenome

text: biological replicate 8


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.19 N 27.35 E

text: soil metagenome

text: biological replicate 9


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.19 N 27.35 E

text: soil metagenome

text: biological replicate 10


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.19 N 27.35 E

text: soil metagenome

text: biological replicate 11


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.19 N 27.35 E

text: soil metagenome

text: biological replicate 12


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.19 N 27.35 E

text: soil metagenome

text: biological replicate 13


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.19 N 27.35 E

text: soil metagenome

text: biological replicate 14


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.19 N 27.35 E

text: soil metagenome

text: biological replicate 15


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.19 N 27.35 E

text: soil metagenome

text: biological replicate 16


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.28 N 27.12 E

text: soil metagenome

text: biological replicate 1


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.28 N 27.12 E

text: soil metagenome

text: biological replicate 2


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.28 N 27.12 E

text: soil metagenome

text: biological replicate 3


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.28 N 27.12 E

text: soil metagenome

text: biological replicate 4


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.28 N 27.12 E

text: soil metagenome

text: biological replicate 5


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.28 N 27.12 E

text: soil metagenome

text: biological replicate 6


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.28 N 27.12 E

text: soil metagenome

text: biological replicate 7


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.28 N 27.12 E

text: soil metagenome

text: biological replicate 8


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.28 N 27.12 E

text: soil metagenome

text: biological replicate 9


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.28 N 27.12 E

text: soil metagenome

text: biological replicate 10


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.28 N 27.12 E

text: soil metagenome

text: biological replicate 11


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.28 N 27.12 E

text: soil metagenome

text: biological replicate 12


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.28 N 27.12 E

text: soil metagenome

text: biological replicate 13


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.28 N 27.12 E

text: soil metagenome

text: biological replicate 14


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.28 N 27.12 E

text: soil metagenome

text: biological replicate 15


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.20 N 27.33 E

text: soil metagenome

text: biological replicate 1


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.20 N 27.33 E

text: soil metagenome

text: biological replicate 2


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.20 N 27.33 E

text: soil metagenome

text: biological replicate 3


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.20 N 27.33 E

text: soil metagenome

text: biological replicate 4


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.20 N 27.33 E

text: soil metagenome

text: biological replicate 5


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.20 N 27.33 E

text: soil metagenome

text: biological replicate 6


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.20 N 27.33 E

text: soil metagenome

text: biological replicate 7


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.20 N 27.33 E

text: soil metagenome

text: biological replicate 8


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.20 N 27.33 E

text: soil metagenome

text: biological replicate 9


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.20 N 27.33 E

text: soil metagenome

text: biological replicate 10


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.20 N 27.33 E

text: soil metagenome

text: biological replicate 11


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.20 N 27.33 E

text: soil metagenome

text: biological replicate 12


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.20 N 27.33 E

text: soil metagenome

text: biological replicate 13


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.20 N 27.33 E

text: soil metagenome

text: biological replicate 14


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.20 N 27.33 E

text: soil metagenome

text: biological replicate 15


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.20 N 27.33 E

text: soil metagenome

text: biological replicate 16


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.23 N 27.41 E

text: soil metagenome

text: biological replicate 1


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.23 N 27.41 E

text: soil metagenome

text: biological replicate 2


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.23 N 27.41 E

text: soil metagenome

text: biological replicate 3


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.23 N 27.41 E

text: soil metagenome

text: biological replicate 4


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.23 N 27.41 E

text: soil metagenome

text: biological replicate 5


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.23 N 27.41 E

text: soil metagenome

text: biological replicate 6


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.23 N 27.41 E

text: soil metagenome

text: biological replicate 7


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.23 N 27.41 E

text: soil metagenome

text: biological replicate 8


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.23 N 27.41 E

text: soil metagenome

text: biological replicate 9


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.23 N 27.41 E

text: soil metagenome

text: biological replicate 10


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.23 N 27.41 E

text: soil metagenome

text: biological replicate 11


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.23 N 27.41 E

text: soil metagenome

text: biological replicate 12


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.23 N 27.41 E

text: soil metagenome

text: biological replicate 13


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.23 N 27.41 E

text: soil metagenome

text: biological replicate 14


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.23 N 27.41 E

text: soil metagenome

text: biological replicate 15


text: University of Oulu

text: live

text: MIMARKS.survey

text: 0-10 cm

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: missing

text: stream riparian forest

text: missing

text: riparian soil

text: Finland: Pudasjrvi

text: 65.23 N 27.41 E

text: soil metagenome

text: biological replicate 16


ADI IsletCore R445

text: University of Alberta

text: live

text: Human

characteristic: age

text: ADI IsletCore

characteristic: isolate

text: Homo sapiens

text: male

characteristic: sex

text: pancreatic islets of Langerhans

text: Human sample from Homo sapiens


text: Wisconsin State Laboratory of Hygiene

characteristic: INSDC secondary accession

text: live

text: Pasteur ST2

characteristic: MLST#

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

characteristic: host

text: Acinetobacter baumannii

text: Whole Organism

characteristic: strain

text: Microbe sample from Acinetobacter baumannii


text: Wisconsin State Laboratory of Hygiene

text: live

text: Pasteur ST2;Oxford ST281

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: Acinetobacter baumannii

characteristic: organism

text: Whole Organism


text: Wadsworth Center

text: live

text: Pathogen.cl

text: missing

text: USA:Suffolk County

text: Homo sapiens

text: Tuberculosis

text: sputum

text: missing

text: Mycobacterium tuberculosis

text: Pathogen: clinical or host-associated sample from Mycobacterium tuberculosis

characteristic: title


characteristic: External Id

text: Wadsworth Center

text: live

text: Pathogen.cl

text: missing

text: USA:Queens County

text: Homo sapiens

text: Tuberculosis

text: lymph node

text: missing

text: Mycobacterium tuberculosis


text: Wadsworth Center

characteristic: INSDC center name

text: live

text: Pathogen.cl

text: missing

text: USA:Queens County

text: Homo sapiens

text: Tuberculosis

text: sputum

text: missing

text: Mycobacterium tuberculosis


text: Wadsworth Center

text: live

text: Pathogen.cl

characteristic: SRA accession

text: missing

text: USA:Erie County

text: Homo sapiens

text: Tuberculosis

text: sputum

text: missing

text: Mycobacterium tuberculosis


text: Wadsworth Center

characteristic: INSDC first public

text: live

text: Pathogen.cl

text: missing

text: USA:Kings County

text: Homo sapiens

text: Tuberculosis

text: wound

text: missing

text: Mycobacterium tuberculosis


text: Wadsworth Center

characteristic: INSDC last update

text: live

text: Pathogen.cl

text: missing

text: USA:Monroe County

text: Homo sapiens

text: Tuberculosis

text: bronchial wash

text: missing

text: Mycobacterium tuberculosis


text: Wadsworth Center

text: live

characteristic: INSDC status

text: Pathogen.cl

text: missing

text: USA:Monroe County

text: Homo sapiens

text: Tuberculosis

text: sputum

text: missing

text: Mycobacterium tuberculosis


text: Wadsworth Center

text: live

text: Pathogen.cl

characteristic: NCBI submission model

text: missing

text: USA:Oneida County

text: Homo sapiens

text: Tuberculosis

text: sputum

text: missing

text: Mycobacterium tuberculosis


text: Wadsworth Center

text: live

text: Pathogen.cl

characteristic: NCBI submission package

text: missing

text: USA:Suffolk County

text: Homo sapiens

text: Tuberculosis

text: pleural fluid

text: missing

text: Mycobacterium tuberculosis


text: Wadsworth Center

text: live

text: Pathogen.cl

text: missing

text: USA:Kings County

text: Homo sapiens

text: Tuberculosis

text: sputum

text: missing

text: Mycobacterium tuberculosis


text: Wadsworth Center

text: live

text: Pathogen.cl

text: missing

text: USA:Broome County

text: Homo sapiens

text: Tuberculosis

text: bronchial wash

text: missing

text: Mycobacterium tuberculosis


text: Wadsworth Center

text: live

text: Pathogen.cl

text: missing

text: USA:Westchester County

text: Homo sapiens

text: Tuberculosis

text: lymph node

text: missing

text: Mycobacterium tuberculosis


text: Wadsworth Center

text: live

text: Pathogen.cl

text: missing

text: USA:Westchester County

text: Homo sapiens

text: Tuberculosis

text: sputum coughed

text: missing

text: Mycobacterium tuberculosis


text: Wisconsin State Laboratory of Hygiene

text: live

text: Oxford ST281;Pasteur ST2

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: Acinetobacter baumannii

text: Whole Organism


text: Wisconsin State Laboratory of Hygiene

text: live

text: Pasteur ST499

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: Acinetobacter baumannii

text: Whole Organism


text: Wisconsin State Laboratory of Hygiene

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: Klebsiella pneumoniae

text: Whole Organism

text: Microbe sample from Klebsiella pneumoniae


text: Wisconsin State Laboratory of Hygiene

text: live

text: Pasteur ST595;Achtman ST2179

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: Escherichia coli

text: Whole Organism

text: Microbe sample from Escherichia coli


text: Wisconsin State Laboratory of Hygiene

text: live

text: Pasteur ST2

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: Acinetobacter baumannii

text: Whole Organism


text: Wisconsin State Laboratory of Hygiene

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: Enterobacter hormaechei

text: Whole Organism

text: Microbe sample from Enterobacter hormaechei


text: Wisconsin State Laboratory of Hygiene

text: live

text: Achtman ST216

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: Escherichia coli

text: Whole Organism

text: Microbe sample from Escherichia coli


text: Wisconsin State Laboratory of Hygiene

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: Citrobacter freundii

text: Whole Organism

text: Microbe sample from Citrobacter freundii


text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.cl

text: CDC

text: missing

text: USA

text: missing

text: missing

text: missing

text: missing

text: missing

text: missing

text: Salmonella enterica

text: missing

characteristic: serovar

text: Salmonella enterica


text: United States Department of Agriculture, Agricultural Research Service

text: live

text: Male

characteristic: Infant sex

text: Metagenome or environmental

text: Diarrheal stool from predominantly breastfed male infant 10 months old

characteristic: description

text: Peru:Loreto

text: Homo sapiens

text: stool

text: 3.80 S 73.34 W

text: metagenome

text: Fecal DNA was extracted from 0.2 grams of feces using the QIAamp DNA Stool Mini Kit (Qiagen, Carlsbald, CA), according to the manufacturer’s instructions.

text: LMIC human infant stool sample 13323, whole-genome shotgun metagenomic sequencing


characteristic: INSDC secondary accession

text: live

text: Male

text: Metagenome or environmental

text: Diarrheal stool from predominantly breastfed male infant 11 months old

text: Peru:Loreto

text: Homo sapiens

text: stool

text: 3.80 S 73.34 W

text: metagenome

text: LMIC human infant stool sample 13812, whole-genome shotgun metagenomic sequencing


text: live

text: Male

text: Metagenome or environmental

text: Diarrheal stool from partially breastfed male infant 11 months old

text: Peru:Loreto

text: Homo sapiens

text: stool

text: 3.80 S 73.34 W

text: metagenome

text: LMIC human infant stool sample 15704, whole-genome shotgun metagenomic sequencing


text: live

text: Male

text: Metagenome or environmental

text: Diarrheal stool from partially breastfed male infant 8 months old

text: Peru:Loreto

text: Homo sapiens

text: stool

text: 3.80 S 73.34 W

text: metagenome

text: LMIC human infant stool sample 18102, whole-genome shotgun metagenomic sequencing


text: live

text: Male

text: Metagenome or environmental

text: Diarrheal stool from partially breastfed male infant 10 months old

text: Peru:Loreto

text: Homo sapiens

text: stool

text: 3.80 S 73.34 W

text: metagenome

text: LMIC human infant stool sample 18196, whole-genome shotgun metagenomic sequencing


text: live

text: Male

text: Metagenome or environmental

text: Peru:Loreto

text: Homo sapiens

text: stool

text: 3.80 S 73.34 W

text: metagenome

text: LMIC human infant stool sample 19879, whole-genome shotgun metagenomic sequencing


text: live

text: Male

text: Metagenome or environmental

text: Peru:Loreto

text: Homo sapiens

text: stool

text: 3.80 S 73.34 W

text: metagenome

text: LMIC human infant stool sample 22997, whole-genome shotgun metagenomic sequencing


text: live

text: Male

text: Metagenome or environmental

text: Peru:Loreto

text: Homo sapiens

text: stool

text: 3.80 S 73.34 W

text: metagenome

text: LMIC human infant stool sample 25500, whole-genome shotgun metagenomic sequencing


text: live

text: Female

text: Metagenome or environmental

text: Monthly stool sample from not breastfed female infant 16 months old

text: Peru:Loreto

text: Homo sapiens

text: stool

text: 3.80 S 73.34 W

text: metagenome

text: LMIC human infant stool sample 28671, whole-genome shotgun metagenomic sequencing


text: United States Department of Agriculture, Agricultural Research Service

text: live

text: Male

text: Metagenome or environmental

text: Diarrheal stool from partially breastfed male infant 12 months old

text: Peru:Loreto

text: Homo sapiens

text: stool

text: 3.80 S 73.34 W

text: metagenome

text: LMIC human infant stool sample 31204, whole-genome shotgun metagenomic sequencing


text: live

text: Female

text: Metagenome or environmental

text: Diarrheal stool from partially breastfed female infant 11 months old

text: Peru:Loreto

text: Homo sapiens

text: stool

text: 3.80 S 73.34 W

text: metagenome

text: Fecal DNA was extracted from 0.2 grams of feces using the QIAamp DNA Stool Mini Kit (Qiagen, Carlsbald, CA), according to the manufacturer’s instructions.

text: LMIC human infant stool sample 34891, whole-genome shotgun metagenomic sequencing


text: live

text: Male

text: Metagenome or environmental

text: Diarrheal stool from exclusively breastfed male infant 4 months old

text: Peru:Loreto

text: Homo sapiens

text: stool

text: 3.80 S 73.34 W

text: metagenome

text: LMIC human infant stool sample 37185, whole-genome shotgun metagenomic sequencing


text: live

text: Female

text: Metagenome or environmental

text: Monthly stool sample from partially breastfed female infant 15 months old

text: Peru:Loreto

text: Homo sapiens

text: stool

text: 3.80 S 73.34 W

text: metagenome

text: LMIC human infant stool sample 41480, whole-genome shotgun metagenomic sequencing


text: live

text: Female

text: Metagenome or environmental

text: Diarrheal stool from partially breastfed female infant 8 months old

text: Peru:Loreto

text: Homo sapiens

text: stool

text: 3.80 S 73.34 W

text: metagenome

text: LMIC human infant stool sample 52141, whole-genome shotgun metagenomic sequencing


text: live

text: Male

text: Metagenome or environmental

text: Monthly stool sample from partially breastfed male infant 16 months old

text: Peru:Loreto

text: Homo sapiens

text: stool

text: 3.80 S 73.34 W

text: metagenome

text: LMIC human infant stool sample 57052, whole-genome shotgun metagenomic sequencing


text: live

text: Male

text: Metagenome or environmental

text: Diarrheal stool from partially breastfed male infant 13 months old

text: Peru:Loreto

text: Homo sapiens

text: stool

text: 3.80 S 73.34 W

text: metagenome

text: LMIC human infant stool sample 57847, whole-genome shotgun metagenomic sequencing


text: live

text: Female

text: Metagenome or environmental

text: Peru:Loreto

text: Homo sapiens

text: stool

text: 3.80 S 73.34 W

text: metagenome

text: LMIC human infant stool sample 63792, whole-genome shotgun metagenomic sequencing