text: mothur

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

characteristic: NCBI submission model

text: ND

text: Photogranule formed from untreated activated sludge 3, sample 1

text: Bench scale batch incubation

text: Batch incubation in 4 ml vial

text: Granulated biomass, photogranule

text: 43.15 N 2.99 E

text: biofilm metagenome

text: biofilm metagenome

text: 23S count: 5262294938 copies/ml

text: aerobic

text: ND

text: aerobe

text: forceps

text: two months

text: freezer

text: -20 deg C

text: 400 mm3

text: Photogranule, 23S rRNA amplicon

text: ND

text: Photogranule, 23S rRNA amplicon

characteristic: title


status: PUBLIC

characteristic: External Id

text: mothur

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: NCBI submission package

characteristic: SRA accession

text: ND

tag: attribute

characteristic: collection date

characteristic: description

text: Bench scale batch incubation

characteristic: env biome

text: Batch incubation in 4 ml vial

characteristic: env feature

text: Granulated biomass, photogranule

text: France: Narbonne, INRAE-LBE, batch incubation

characteristic: geo loc name

text: 43.15 N 2.99 E

characteristic: lat lon

text: biofilm metagenome

characteristic: organism

text: biofilm metagenome

text: 16S count: 10328222747 copies/ml

characteristic: organism count

text: aerobic

text: ND

characteristic: ph

text: aerobe

text: forceps

text: one photogranule of approximately 9 mm in diameter

text: two months

text: freezer

text: -20 deg C

text: 400 mm3

text: Photogranule, 16S rRNA amplicon

characteristic: sample title

text: Illumina MiSeq amplicon sequencing, 16S rRNA primers U515-532 U909-928 of Table 2 in Wang and Qiang, Plos One, 2009

text: ND

characteristic: temp

text: Photogranule, 16S rRNA amplicon


text: mothur

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

characteristic: NCBI submission model

text: ND

text: Hemispheroid formed from untreated activated sludge 3

text: Bench scale batch incubation

text: Batch incubation in 4 ml vial

text: Contracted biomass, hemispheroid

text: 43.15 N 2.99 E

text: biofilm metagenome

text: biofilm metagenome

text: 23S count: 3446937526 copies/ml

text: aerobic

text: ND

text: aerobe

text: forceps

text: one hemispheroid of approximately 11 mm in diameter

text: two months

text: freezer

text: -20 deg C

text: 350 mm3

text: Hemispheroid, 23S rRNA amplicon

text: Illumina MiSeq amplicon sequencing, 23S rRNA primers p23SrV_f1 and r1 by Sherwood and Presting 2007

text: ND

text: Hemispheroid, 23S rRNA amplicon

characteristic: title


characteristic: External Id

text: mothur

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: NCBI submission package

characteristic: SRA accession

text: ND

text: Bench scale batch incubation

text: Batch incubation in 4 ml vial

text: Contracted biomass, hemispheroid

text: 43.15 N 2.99 E

text: biofilm metagenome

text: biofilm metagenome

text: 16S count: 24453120679 copies/ml

text: aerobic

text: ND

text: aerobe

text: forceps

text: two months

text: freezer

text: -20 deg C

text: 350 mm3

text: Hemispheroid, 16S rRNA amplicon

text: ND

text: Hemispheroid, 16S rRNA amplicon


text: mothur

text: live

text: ND

characteristic: collection date

text: Microbial mat formed from untreated activated sludge 3, sample 1

characteristic: description

text: Bench scale batch incubation

characteristic: env biome

text: Batch incubation in 4 ml vial

characteristic: env feature

text: Compacted biomass, microbial mat

characteristic: geo loc name

text: 43.15 N 2.99 E

text: biofilm metagenome

text: biofilm metagenome

text: 23S count: 1500965353 copies/ml

text: aerobic

text: ND

text: aerobe

text: forceps

text: one mat of approximately 13 mm in diameter

text: two months

text: freezer

text: -20 deg C

text: 250 mm3

text: Microbial mat, 23S rRNA amplicon

text: ND

text: Microbial mat, 23S rRNA amplicon


text: mothur

text: live

text: ND

text: Bench scale batch incubation

text: Batch incubation in 4 ml vial

text: Compacted biomass, microbial mat

text: 43.15 N 2.99 E

characteristic: lat lon

text: biofilm metagenome

characteristic: organism

text: biofilm metagenome

text: 16S count: 16696740887 copies/ml

characteristic: organism count

text: aerobic

text: ND

characteristic: ph

text: aerobe

text: forceps

text: two months

text: freezer

text: -20 deg C

text: 250 mm3

text: Microbial mat, 16S rRNA amplicon

characteristic: sample title

text: ND

text: Microbial mat, 16S rRNA amplicon


text: mothur

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

characteristic: NCBI submission model

text: 4785 mg/L O2 total COD, 471 mg/L O2 soluble COD

text: Activated sludge 3, inoculum of samples harvested on 180126

text: Full-scale activated sludge

text: Activated sludge sampled from the wastewater treatment plant in Narbonne, France

text: Activated sludge

text: France: Narbonne, wastewater treatment plant

text: 43.15 N 2.99 E

text: 4.9 g/L TS

text: activated sludge metagenome

text: activated sludge metagenome

text: 23S count: 1028166159 copies/ml

text: aerobic

text: aerobe

text: beaker for activated sludge sample from wastewater treatment plant, pipette for DNA sample

text: 500 microliters

text: three months

text: freezer

text: -20 deg C

text: 500 microliters

text: Activated sludge 3, 23S rRNA amplicon

text: municipal

characteristic: temp

text: Activated sludge 3, 23S rRNA amplicon


characteristic: External Id

text: mothur

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: NCBI submission package

text: Full-scale activated sludge

text: Activated sludge

text: 43.15 N 2.99 E

text: 4.9 g/L TS

text: activated sludge metagenome

text: activated sludge metagenome

text: 16S count: 61848040409 copies/ml

text: aerobic

text: aerobe

text: 500 microliters

text: three months

text: freezer

text: -20 deg C

text: 500 microliters

text: Activated sludge 3, 16S rRNA amplicon

text: municipal

text: Activated sludge 3, 16S rRNA amplicon

characteristic: title


text: mothur

text: live

characteristic: SRA accession

text: ND

characteristic: collection date

text: Addition iii, homogenized entire OPGs from a photo-bioreactor (stock solution), added to activated sludge 3

characteristic: description

text: Laboratory scale photo-bioreactor

characteristic: env biome

text: Sequencing batch photo-bioreactor fed with synthetic wastewater

characteristic: env feature

text: Granulated biomass, photogranule

text: France: Narbonne, INRAE-LBE, photo-bioreactor

text: 43.15 N 2.99 E

text: metagenome

text: metagenome

text: 23S count: 1940530000000 copies/ml

text: aerobic

text: ND

text: aerobe

text: pipette

text: 100 microliters

text: three months

text: freezer

text: -20 deg C

text: 100 microliters

text: Addition iii, 23S rRNA amplicon

text: ND

text: Addition iii, 23S rRNA amplicon


text: mothur

text: live

text: ND

text: Laboratory scale photo-bioreactor

text: Granulated biomass, photogranule

characteristic: geo loc name

text: 43.15 N 2.99 E

characteristic: lat lon

text: metagenome

characteristic: organism

text: metagenome

text: 16S count: 4019320000000 copies/ml

characteristic: organism count

text: aerobic

text: ND

characteristic: ph

text: aerobe

text: pipette

text: 100 microliters

text: three months

text: freezer

text: -20 deg C

text: 100 microliters

text: Addition iii, 16S rRNA amplicon

text: ND

text: Addition iii, 16S rRNA amplicon


text: mothur

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

characteristic: NCBI submission model

text: ND

text: Addition ii, homogenized outer layers of photo-bioreactor OPGs (stock solution), added to activated sludge 2

text: Laboratory scale photo-bioreactor

text: Granulated biomass, photogranule

text: 43.15 N 2.99 E

text: metagenome

text: metagenome

text: 23S count: 1254036566 copies/ml

text: aerobic

text: ND

text: aerobe

text: pipette

text: 200 microliters

text: three years

text: freezer

text: -20 deg C

text: 200 microliters

text: Addition ii, 23S rRNA amplicon

characteristic: sample title

text: ND

text: Addition ii, 23S rRNA amplicon


characteristic: External Id

text: mothur

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: NCBI submission package

text: ND

text: Laboratory scale photo-bioreactor

text: Granulated biomass, photogranule

text: 43.15 N 2.99 E

text: metagenome

text: metagenome

text: 16S count: 25049487347 copies/ml

text: aerobic

text: ND

text: aerobe

text: pipette

text: 200 microliters

text: three years

text: freezer

text: -20 deg C

text: 200 microliters

text: Addition ii, 16S rRNA amplicon

text: ND

characteristic: temp

text: Addition ii, 16S rRNA amplicon


text: mothur

text: live

characteristic: SRA accession

text: ND

characteristic: collection date

text: Addition ii, homogenized outer layers of photo-bioreactor OPGs (10^2 times dilution), added to activated sludge 2

characteristic: description

text: Laboratory scale photo-bioreactor

characteristic: env biome

text: Granulated biomass, photogranule

text: 43.15 N 2.99 E

text: metagenome

text: metagenome

text: 23S count: 19564708.66 copies/ml

text: aerobic

text: ND

text: aerobe

text: pipette

text: 500 microliters

text: three years

text: freezer

text: -20 deg C

text: 500 microliters

text: Addition ii, 23S rRNA amplicon

text: ND

text: Addition ii, 23S rRNA amplicon

characteristic: title


text: mothur

text: live

text: ND

text: Laboratory scale photo-bioreactor

characteristic: env feature

text: Granulated biomass, photogranule

characteristic: geo loc name

text: 43.15 N 2.99 E

characteristic: lat lon

text: metagenome

characteristic: organism

text: metagenome

text: 16S count: 31438675.51 copies/ml

characteristic: organism count

text: aerobic

text: ND

text: aerobe

text: pipette

text: 500 microliters

text: three years

text: freezer

text: -20 deg C

text: 500 microliters

text: Addition ii, 16S rRNA amplicon

text: ND

text: Addition ii, 16S rRNA amplicon


text: mothur

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

characteristic: NCBI submission model

text: ND

text: Addition i, homogenized outer layers of hydrostatic OPGs (stock solution), added to activated sludge 1

text: Bench scale batch incubation

text: Batch incubation in 24-well plates

text: Granulated biomass, photogranule

text: France: Narbonne, INRAE-LBE, batch incubation

text: 43.15 N 2.99 E

text: metagenome

text: metagenome

text: 23S count: 28161266128 copies/ml

text: aerobic

text: ND

characteristic: ph

text: aerobe

text: pipette

text: 100 microliters

text: three years

text: freezer

text: -20 deg C

text: 100 microliters

text: Addition i, 23S rRNA amplicon

text: ND

text: Addition i, 23S rRNA amplicon


characteristic: External Id

text: mothur

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: NCBI submission package

text: ND

text: Bench scale batch incubation

text: Batch incubation in 24-well plates

text: Granulated biomass, photogranule

text: 43.15 N 2.99 E

text: metagenome

text: metagenome

text: 16S count: 123507000000 copies/ml

text: aerobic

text: ND

text: aerobe

text: pipette

text: 100 microliters

text: three years

text: freezer

text: -20 deg C

text: 100 microliters

text: Addition i, 16S rRNA amplicon

characteristic: sample title

text: Illumina MiSeq amplicon sequencing, 16S rRNA primers U515-532 U909-928 of Table 2 in Wang and Qiang, Plos One, 2009

text: ND

text: Addition i, 16S rRNA amplicon


text: mothur

text: live

characteristic: SRA accession

text: ND

characteristic: collection date

text: Addition i, homogenized outer layers of hydrostatic OPGs (10^2 times dilution), added to activated sludge 1

characteristic: description

text: Bench scale batch incubation

characteristic: env biome

text: Batch incubation in 24-well plates

text: Granulated biomass, photogranule

text: 43.15 N 2.99 E

text: metagenome

text: metagenome

text: 23S count: 57374950.1 copies/ml

text: aerobic

text: ND

text: aerobe

text: pipette

text: 500 microliters

text: three years

text: freezer

text: -20 deg C

text: 500 microliters

text: Addition i, 23S rRNA amplicon

text: ND

characteristic: temp

text: Addition i, 23S rRNA amplicon


text: mothur

text: live

text: ND

text: Bench scale batch incubation

text: Batch incubation in 24-well plates

characteristic: env feature

text: Granulated biomass, photogranule

characteristic: geo loc name

text: 43.15 N 2.99 E

characteristic: lat lon

text: metagenome

characteristic: organism

text: metagenome

text: 16S count: 332395511.6 copies/ml

text: aerobic

text: ND

text: aerobe

text: pipette

text: 500 microliters

text: three years

text: freezer

text: -20 deg C

text: 500 microliters

text: Addition i, 16S rRNA amplicon

text: ND

text: Addition i, 16S rRNA amplicon

characteristic: title


text: SARS-CoV-2/Human/USA/UT-CDC-2-6072619/2021

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: UT-Unified State Labs: Public Health Utah DOH

characteristic: collected by

text: Nasopharyngeal swab

characteristic: collection method

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

characteristic: host

characteristic: host disease

text: female

characteristic: host sex

characteristic: isolate

text: nasopharyngeal swab

characteristic: isolation source

characteristic: lineage/clade name

text: Severe acute respiratory syndrome coronavirus 2

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


characteristic: External Id

text: SARS-CoV-2/Human/USA/UT-CDC-2-6072607/2021

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

characteristic: collection date

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/UT-CDC-2-6072549/2021

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Utah

characteristic: geo loc name

text: Homo sapiens

text: female

text: nasopharyngeal swab

characteristic: organism

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance

characteristic: title


text: SARS-CoV-2/Human/USA/UT-CDC-2-6072548/2021

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/UT-CDC-2-6072542/2021

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: collected by

text: Nasopharyngeal swab

characteristic: collection method

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

characteristic: host

text: male

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/UT-CDC-2-6072521/2021

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

characteristic: host disease

text: female

characteristic: host sex

characteristic: isolate

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/UT-CDC-2-6072509/2021

characteristic: External Id

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

text: male

text: nasopharyngeal swab

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/UT-CDC-2-6072508/2021

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

text: male

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/UT-CDC-2-6072501/2021

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: collection date

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Utah

characteristic: geo loc name

text: Homo sapiens

text: female

text: nasopharyngeal swab

characteristic: organism

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/UT-CDC-2-6072438/2021

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance

characteristic: title


text: SARS-CoV-2/Human/USA/SD-CDC-2-6069722/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: SD Public Health Laboratory

characteristic: collected by

text: Nasopharyngeal swab

characteristic: collection method

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: South Dakota

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/SD-CDC-2-6069713/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: SD Public Health Laboratory

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: South Dakota

text: Homo sapiens

characteristic: host

characteristic: host disease

text: male

characteristic: host sex

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/SD-CDC-2-6069705/2022

characteristic: External Id

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: SD Public Health Laboratory

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: South Dakota

text: Homo sapiens

text: female

characteristic: isolate

text: nasopharyngeal swab

characteristic: isolation source

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/SD-CDC-2-6069704/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

text: SD Public Health Laboratory

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: South Dakota

text: Homo sapiens

text: female

text: nasopharyngeal swab

characteristic: lineage/clade name

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/SD-CDC-2-6069702/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: SD Public Health Laboratory

characteristic: collection date

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: South Dakota

characteristic: geo loc name

text: Homo sapiens

text: male

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/SD-CDC-2-6069626/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: SD Public Health Laboratory

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: South Dakota

text: Homo sapiens

text: female

text: nasopharyngeal swab

characteristic: organism

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/SD-CDC-2-6069622/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: SD Public Health Laboratory

characteristic: collected by

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: South Dakota

text: Homo sapiens

text: male

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance

characteristic: title


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070737/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

characteristic: collection method

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

characteristic: host

characteristic: host disease

text: nasopharyngeal swab

text: Severe acute respiratory syndrome coronavirus 2

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


characteristic: External Id

text: SARS-CoV-2/Human/USA/RI-CDC-2-6070735/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

characteristic: isolate

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070734/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

characteristic: isolation source

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070733/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

characteristic: lineage/clade name

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070732/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: RI State Health Laboratories

characteristic: collection date

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070731/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

characteristic: geo loc name

text: Homo sapiens

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070730/2022

text: CDC DVD Genomics and DIscovery Team

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

characteristic: organism

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070729/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: RI State Health Laboratories

characteristic: collected by

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070728/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

characteristic: collection method

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance

characteristic: title


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070727/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

characteristic: host

characteristic: host disease

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


characteristic: External Id

text: SARS-CoV-2/Human/USA/RI-CDC-2-6070724/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

characteristic: isolate

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070723/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

characteristic: isolation source

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070722/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

characteristic: lineage/clade name

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070721/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: RI State Health Laboratories

characteristic: collection date

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070720/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

characteristic: geo loc name

text: Homo sapiens

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070719/2022

text: CDC DVD Genomics and DIscovery Team

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

characteristic: organism

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070715/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: RI State Health Laboratories

characteristic: collected by

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070714/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

characteristic: collection method

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

text: Severe acute respiratory syndrome coronavirus 2

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance

characteristic: title


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070713/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

characteristic: host

characteristic: host disease

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


characteristic: External Id

text: SARS-CoV-2/Human/USA/RI-CDC-2-6070711/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

characteristic: isolate

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070710/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

characteristic: isolation source

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070705/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

characteristic: lineage/clade name

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070704/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: RI State Health Laboratories

characteristic: collection date

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070702/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

characteristic: geo loc name

text: Homo sapiens

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070701/2022

text: CDC DVD Genomics and DIscovery Team

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

characteristic: organism

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070650/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: RI State Health Laboratories

characteristic: collected by

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070649/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

characteristic: collection method

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance

characteristic: title


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070636/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

characteristic: host

characteristic: host disease

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070635/2022

characteristic: External Id

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

characteristic: isolate

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070634/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

characteristic: isolation source

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070633/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

characteristic: lineage/clade name

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070632/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: RI State Health Laboratories

characteristic: collection date

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070631/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

characteristic: geo loc name

text: Homo sapiens

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070630/2022

text: CDC DVD Genomics and DIscovery Team

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

characteristic: organism

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070627/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: RI State Health Laboratories

characteristic: collected by

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

text: Severe acute respiratory syndrome coronavirus 2

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070626/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

characteristic: collection method

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance

characteristic: title


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070625/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

characteristic: host

characteristic: host disease

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


characteristic: External Id

text: SARS-CoV-2/Human/USA/RI-CDC-2-6070624/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

characteristic: isolate

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070622/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

characteristic: isolation source

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070621/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

characteristic: lineage/clade name

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070619/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: RI State Health Laboratories

characteristic: collection date

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070618/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

characteristic: geo loc name

text: Homo sapiens

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070615/2022

text: CDC DVD Genomics and DIscovery Team

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

characteristic: organism

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070614/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: RI State Health Laboratories

characteristic: collected by

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070613/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

characteristic: collection method

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance

characteristic: title


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070612/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

characteristic: host

characteristic: host disease

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


characteristic: External Id

text: SARS-CoV-2/Human/USA/RI-CDC-2-6070606/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

characteristic: isolate

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070605/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

characteristic: isolation source

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070604/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

characteristic: lineage/clade name

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070603/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: RI State Health Laboratories

characteristic: collection date

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070602/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

characteristic: geo loc name

text: Homo sapiens

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070601/2022

text: CDC DVD Genomics and DIscovery Team

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6070550/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: RI State Health Laboratories

characteristic: collected by

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/PR-CDC-2-6069741/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: PR Public Health Lab

text: Nasopharyngeal swab

characteristic: collection method

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Puerto Rico

text: Homo sapiens

text: female

characteristic: host sex

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance

characteristic: title


text: SARS-CoV-2/Human/USA/PR-CDC-2-6069740/2022

characteristic: External Id

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: PR Public Health Lab

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Puerto Rico

text: Homo sapiens

characteristic: host

characteristic: host disease

text: male

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

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text: Oral swab

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text: N

text: Swift Primers V2

text: USA: North Dakota

text: Homo sapiens

text: female

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characteristic: lineage/clade name

text: baseline surveillance (random sampling)

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text: CDC DVD Genomics and DIscovery Team

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text: N

text: Swift Primers V2

text: USA: North Dakota

text: Homo sapiens

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characteristic: organism

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characteristic: External Id

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

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text: N

text: Swift Primers V2

text: USA: North Dakota

text: Homo sapiens

characteristic: host

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text: baseline surveillance (random sampling)

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text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

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text: N

text: Swift Primers V2

text: USA: North Dakota

text: Homo sapiens

characteristic: host disease

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text: Severe acute respiratory syndrome coronavirus 2

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text: USA: North Dakota

text: Homo sapiens

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text: CDC DVD Genomics and DIscovery Team

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text: live

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text: N

text: Swift Primers V2

text: USA: North Dakota

text: Homo sapiens

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characteristic: isolation source

text: baseline surveillance (random sampling)

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text: CDC DVD Genomics and DIscovery Team

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characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

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text: Oral swab

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text: N

text: Swift Primers V2

text: USA: North Dakota

text: Homo sapiens

text: female

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characteristic: lineage/clade name

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/ND-CDC-2-6069804/2022

text: CDC DVD Genomics and DIscovery Team

text: live

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characteristic: collection method

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text: N

text: Swift Primers V2

text: USA: North Dakota

characteristic: geo loc name

text: Homo sapiens

text: female

text: Oral swab

text: baseline surveillance (random sampling)

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characteristic: External Id

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

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text: N

text: Swift Primers V2

text: USA: North Dakota

text: Homo sapiens

characteristic: host

text: female

text: nasopharyngeal swab

characteristic: organism

text: baseline surveillance (random sampling)

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text: SARS-CoV-2/Human/USA/ND-CDC-2-6069711/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: Oral swab

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text: N

text: Swift Primers V2

text: USA: North Dakota

text: Homo sapiens

characteristic: host disease

text: male

characteristic: host sex

text: Oral swab

text: baseline surveillance (random sampling)

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text: SARS-CoV-2/Human/USA/ND-CDC-2-6069709/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: Oral swab

text: Oral swab

text: N

text: Swift Primers V2

text: USA: North Dakota

text: Homo sapiens

text: male

text: Oral swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance

characteristic: title


text: SARS-CoV-2/Human/USA/ND-CDC-2-6069706/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: collection date

text: Oral swab

text: Oral swab

text: N

text: Swift Primers V2

text: USA: North Dakota

text: Homo sapiens

text: female

characteristic: isolate

text: Oral swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/ND-CDC-2-6069703/2022

text: CDC DVD Genomics and DIscovery Team

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: Oral swab

text: Oral swab

text: N

text: Swift Primers V2

text: USA: North Dakota

text: Homo sapiens

text: female

text: Oral swab

characteristic: isolation source

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/ND-CDC-2-6069644/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: collected by

text: Oral swab

characteristic: collection method

text: Oral swab

text: N

text: Swift Primers V2

text: USA: North Dakota

text: Homo sapiens

text: female

text: Oral swab

characteristic: lineage/clade name

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


characteristic: External Id

text: SARS-CoV-2/Human/USA/ND-CDC-2-6069624/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Oral swab

text: Oral swab

text: N

text: Swift Primers V2

text: USA: North Dakota

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: female

text: Oral swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/IL-CDC-2-6072624/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: IL Dept. of Public Health Springfield Laboratory

text: Anterior nasal swab

text: Anterior nasal swab

text: N

text: Swift Primers V2

text: USA: Illinois

text: Homo sapiens

characteristic: host disease

text: male

text: Anterior nasal swab

characteristic: organism

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/IL-CDC-2-6072613/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: Anterior nasal swab

text: Anterior nasal swab

text: N

text: Swift Primers V2

text: USA: Illinois

text: Homo sapiens

text: male

characteristic: host sex

text: Anterior nasal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/IL-CDC-2-6072612/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: collection date

text: Anterior nasal swab

text: Anterior nasal swab

text: N

text: Swift Primers V2

text: USA: Illinois

text: Homo sapiens

text: male

text: Anterior nasal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance

characteristic: title


text: SARS-CoV-2/Human/USA/IL-CDC-2-6072605/2022

text: CDC DVD Genomics and DIscovery Team

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Illinois

text: Homo sapiens

text: male

characteristic: isolate

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/IL-CDC-2-6072604/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: collected by

text: Anterior nasal swab

characteristic: collection method

text: Anterior nasal swab

text: N

text: Swift Primers V2

text: USA: Illinois

text: Homo sapiens

text: male

text: Anterior nasal swab

characteristic: isolation source

text: Severe acute respiratory syndrome coronavirus 2

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


characteristic: External Id

text: SARS-CoV-2/Human/USA/IL-CDC-2-6072538/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Anterior nasal swab

text: Anterior nasal swab

text: N

text: Swift Primers V2

text: USA: Illinois

characteristic: geo loc name

text: Homo sapiens

text: female

text: Anterior nasal swab

characteristic: lineage/clade name

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/IL-CDC-2-6072531/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: Anterior nasal swab

text: Anterior nasal swab

text: N

text: Swift Primers V2

text: USA: Illinois

text: Homo sapiens

characteristic: host

characteristic: host disease

text: female

text: Anterior nasal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/IL-CDC-2-6072515/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: Anterior nasal swab

text: Anterior nasal swab

text: N

text: Swift Primers V2

text: USA: Illinois

text: Homo sapiens

text: male

text: Anterior nasal swab

characteristic: organism

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/IL-CDC-2-6072507/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: collection date

text: Anterior nasal swab

text: Anterior nasal swab

text: N

text: Swift Primers V2

text: USA: Illinois

text: Homo sapiens

text: male

characteristic: host sex

text: Anterior nasal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/IL-CDC-2-6072506/2022

text: CDC DVD Genomics and DIscovery Team

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

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text: Anterior nasal swab

text: Anterior nasal swab

text: N

text: Swift Primers V2

text: USA: Illinois

text: Homo sapiens

text: female

text: Anterior nasal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance

characteristic: title


text: SARS-CoV-2/Human/USA/IL-CDC-2-6072505/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: collected by

text: Anterior nasal swab

characteristic: collection method

text: Anterior nasal swab

text: N

text: Swift Primers V2

text: USA: Illinois

text: Homo sapiens

text: male

characteristic: isolate

text: Anterior nasal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/IL-CDC-2-6072504/2022

characteristic: External Id

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Anterior nasal swab

text: Anterior nasal swab

text: N

text: Swift Primers V2

text: USA: Illinois

characteristic: geo loc name

text: Homo sapiens

text: male

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characteristic: isolation source

text: baseline surveillance (random sampling)

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text: SARS-CoV-2/Human/USA/IL-CDC-2-6072446/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: Anterior nasal swab

text: Anterior nasal swab

text: N

text: Swift Primers V2

text: USA: Illinois

text: Homo sapiens

characteristic: host

text: female

text: Anterior nasal swab

characteristic: lineage/clade name

text: baseline surveillance (random sampling)

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text: SARS-CoV-2/Human/USA/IL-CDC-2-6072436/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

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text: Anterior nasal swab

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text: N

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text: USA: Illinois

text: Homo sapiens

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text: baseline surveillance (random sampling)

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text: SARS-CoV-2/Human/USA/IL-CDC-2-6072435/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

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text: Anterior nasal swab

text: Anterior nasal swab

text: N

text: Swift Primers V2

text: USA: Illinois

text: Homo sapiens

text: male

text: Anterior nasal swab

characteristic: organism

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/HI-CDC-2-6071636/2022

text: CDC DVD Genomics and DIscovery Team

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: HI Dept. of Health, State Laboratories Division

text: N

text: Swift Primers V2

text: USA: Hawaii

text: Homo sapiens

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/HI-CDC-2-6071635/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: collected by

text: N

text: Swift Primers V2

text: USA: Hawaii

text: Homo sapiens

text: baseline surveillance (random sampling)

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characteristic: title


text: SARS-CoV-2/Human/USA/HI-CDC-2-6071634/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: N

text: Swift Primers V2

text: USA: Hawaii

text: Homo sapiens

characteristic: isolate

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/HI-CDC-2-6071631/2022

characteristic: External Id

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

characteristic: collection method

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Hawaii

text: Homo sapiens

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/HI-CDC-2-6071630/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: N

text: Swift Primers V2

text: USA: Hawaii

characteristic: geo loc name

text: Homo sapiens

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/HI-CDC-2-6071625/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: N

text: Swift Primers V2

text: USA: Hawaii

text: Homo sapiens

text: Severe acute respiratory syndrome coronavirus 2

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/HI-CDC-2-6071624/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Hawaii

text: Homo sapiens

characteristic: host

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characteristic: isolation source

text: baseline surveillance (random sampling)

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text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

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text: Swift Primers V2

text: USA: Hawaii

text: Homo sapiens

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text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/HI-CDC-2-6071622/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: N

text: Swift Primers V2

text: USA: Hawaii

text: Homo sapiens

characteristic: host disease

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/HI-CDC-2-6071617/2022

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: collection date

text: N

text: Swift Primers V2

text: USA: Hawaii

text: Homo sapiens

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/HI-CDC-2-6071616/2022

text: CDC DVD Genomics and DIscovery Team

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Hawaii

text: Homo sapiens

text: nasopharyngeal swab

characteristic: organism

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/HI-CDC-2-6071615/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: collected by

text: N

text: Swift Primers V2

text: USA: Hawaii

text: Homo sapiens

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