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text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Massachusetts

text: Homo sapiens

text: SARS-CoV-2/Human/USA/MA-CDCBI-CRSP_3OAAZ7NLARCNZ7AR/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Massachusetts

text: Homo sapiens

text: SARS-CoV-2/Human/USA/MA-CDCBI-CRSP_3N67EMWZWU47PTQC/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Massachusetts

text: Homo sapiens

text: SARS-CoV-2/Human/USA/MA-CDCBI-CRSP_3N2B55GDLXARDNQI/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Massachusetts

text: Homo sapiens

text: SARS-CoV-2/Human/USA/MA-CDCBI-CRSP_3MGLYGHRGV5AQPKU/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Massachusetts

text: Homo sapiens

text: SARS-CoV-2/Human/USA/MA-CDCBI-CRSP_3L3S3YRS555PM7WE/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)

text: Pathogen: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Massachusetts

text: Homo sapiens

text: SARS-CoV-2/Human/USA/MA-CDCBI-CRSP_3KTP7SAATAW6K7J3/2022

text: clinical

text: missing

text: Severe acute respiratory syndrome coronavirus 2

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: Broad Institute Genomic Center for Infectious Diseases

text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Massachusetts

text: Homo sapiens

text: SARS-CoV-2/Human/USA/MA-CDCBI-CRSP_3K3HWRQJDECTNM2O/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: Broad Institute Clinical Research Sequencing Platform

text: USA: Massachusetts

text: Homo sapiens

text: SARS-CoV-2/Human/USA/MA-CDCBI-CRSP_3IEG67B7Q3Z3KIOY/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Massachusetts

text: Homo sapiens

text: SARS-CoV-2/Human/USA/MA-CDCBI-CRSP_3IAGVQDRT6OCZORD/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Massachusetts

text: Homo sapiens

text: SARS-CoV-2/Human/USA/MA-CDCBI-CRSP_3CB6KAS4PD6MRAU4/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Massachusetts

text: Homo sapiens

text: SARS-CoV-2/Human/USA/MA-CDCBI-CRSP_3AZ2W5YSV5FW5D7N/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Massachusetts

text: Homo sapiens

text: SARS-CoV-2/Human/USA/MA-CDCBI-CRSP_34YRAIS5E2P7KKJ7/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Massachusetts

text: Homo sapiens

text: SARS-CoV-2/Human/USA/MA-CDCBI-CRSP_32RYBXMLCKOG2VS3/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Massachusetts

text: Homo sapiens

text: SARS-CoV-2/Human/USA/MA-CDCBI-CRSP_2Z6QAZLNASHQNKJC/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Massachusetts

text: Homo sapiens

text: SARS-CoV-2/Human/USA/MA-CDCBI-CRSP_2WO7EWALCJKAQBIE/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Massachusetts

text: Homo sapiens

text: SARS-CoV-2/Human/USA/MA-CDCBI-CRSP_2VM3UMBNJZIYM4XA/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Massachusetts

text: Homo sapiens

text: SARS-CoV-2/Human/USA/MA-CDCBI-CRSP_2U66FLLSZZJLRQWM/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Massachusetts

text: Homo sapiens

text: SARS-CoV-2/Human/USA/MA-CDCBI-CRSP_2TXUXNHQARDAGQJD/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Massachusetts

text: Homo sapiens

text: SARS-CoV-2/Human/USA/MA-CDCBI-CRSP_2RE7TFDMIQ3ZOJW6/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)

text: Pathogen: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Massachusetts

text: Homo sapiens

text: SARS-CoV-2/Human/USA/MA-CDCBI-CRSP_2MO5VP623TPDQQ6E/2022

text: clinical

text: missing

text: Severe acute respiratory syndrome coronavirus 2

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: Broad Institute Genomic Center for Infectious Diseases

text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Massachusetts

text: Homo sapiens

text: SARS-CoV-2/Human/USA/MA-CDCBI-CRSP_2LP6LUWBFEUWEMHQ/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: Broad Institute Clinical Research Sequencing Platform

text: USA: Massachusetts

text: Homo sapiens

text: SARS-CoV-2/Human/USA/MA-CDCBI-CRSP_2L6WRIQTC3WD33Q7/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Massachusetts

text: Homo sapiens

text: SARS-CoV-2/Human/USA/MA-CDCBI-CRSP_2JY2GRBVSZB4XBWB/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Massachusetts

text: Homo sapiens

text: SARS-CoV-2/Human/USA/MA-CDCBI-CRSP_2AYVYN4KFGFTMJTH/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Massachusetts

text: Homo sapiens

text: SARS-CoV-2/Human/USA/MA-CDCBI-CRSP_25LNYBBHQJSW73MX/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Massachusetts

text: Homo sapiens

text: SARS-CoV-2/Human/USA/MA-CDCBI-CRSP_24OAW65VMJUKDCNJ/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Massachusetts

text: Homo sapiens

text: SARS-CoV-2/Human/USA/MA-CDCBI-CRSP_242Q7I3DP7YYPIWG/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Massachusetts

text: Homo sapiens

text: SARS-CoV-2/Human/USA/MA-CDCBI-CRSP_226L5PYD553MFKNO/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-CDCBI-CRSP_SYX7NCR2I5JDITV2/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-CDCBI-CRSP_HTLN5EP3YBUQODLJ/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-CDCBI-CRSP_BGL55P2E55LSQOCV/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: live

text: Pathogen.cl

text: Anterior Nares

text: Mucus

text: USA: Connecticut

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CT-CDCBI-CRSP_A4XDRJQDHMXECN6O/2022

text: clinical

text: missing

text: Diagnostic Testing

text: Baseline surveillance (random sampling)


text: Xu Zhou, Pediatrics, Boston Children's Hospital

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: embryonoic fibroblast

characteristic: cell line

text: Fibroblast

characteristic: cell type

text: wild type

characteristic: genotype

text: Mus musculus

text: Embryo

text: Embryo

characteristic: tissue

text: 0.1% oxygen for 10h

characteristic: treatment


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: embryonoic fibroblast

text: Fibroblast

text: wild type

text: Mus musculus

text: Embryo

text: Embryo

text: 10 uM NaAsO2 for 3h


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: embryonoic fibroblast

text: Fibroblast

text: wild type

text: Mus musculus

text: Embryo

text: Embryo

text: 1 uM thapsigargin for 10h


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: embryonoic fibroblast

text: Fibroblast

text: wild type

text: Mus musculus

text: Embryo

text: Embryo

text: 100 mM NaCl for 3h


text: live

text: Generic

characteristic: NCBI submission package

text: embryonoic fibroblast

text: Fibroblast

text: wild type

text: Mus musculus

text: Embryo

text: Embryo

text: No glutamine for 10h


text: live

text: Generic

text: embryonoic fibroblast

text: Fibroblast

text: wild type

text: Mus musculus

text: Embryo

text: Embryo

text: No glucose for 10h


text: live

text: Generic

text: embryonoic fibroblast

text: Fibroblast

text: wild type

text: Mus musculus

text: Embryo

text: Embryo

text: control


text: Medicine, Beth Israel Deaconess Medical Center

text: live

text: Generic

text: Entire cardiovascular system

characteristic: anatomical location

text: Citrate

characteristic: anticoagulant

text: Healthy Subject

characteristic: diagnosis

text: Homo sapiens

text: miRcury biofluids (Exiqon)

characteristic: rna isolation kit

text: total cell-free biofluid RNA

characteristic: rna source

text: Plasma

text: Plasma

text: 1C 02032017


characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: Entire cardiovascular system

text: Heparin

text: Healthy Subject

text: Homo sapiens

characteristic: organism

text: miRcury biofluids (Exiqon)

text: total cell-free biofluid RNA

text: Plasma

text: Plasma

text: 4H 02032017

characteristic: title


text: live

text: Generic

text: Entire cardiovascular system

text: Healthy Subject

text: Homo sapiens

text: miRcury biofluids (Exiqon)

text: total cell-free biofluid RNA

text: Serum

text: Serum

characteristic: tissue

text: 6S 02032017


characteristic: External Id

text: live

text: Generic

text: Entire cardiovascular system

text: EDTA

text: Healthy Subject

text: Homo sapiens

text: miRcury biofluids (Exiqon)

text: total cell-free biofluid RNA

text: Plasma

text: Plasma

text: 1E 02032017


characteristic: INSDC center name

text: live

text: Generic

text: Entire cardiovascular system

text: Heparin

text: Healthy Subject

text: Homo sapiens

text: miRcury biofluids (Exiqon)

text: total cell-free biofluid RNA

text: Plasma

text: Plasma

text: 5H 02032017


characteristic: INSDC first public

text: live

text: Generic

text: Entire cardiovascular system

text: EDTA

text: Healthy Subject

text: Homo sapiens

text: miRcury biofluids (Exiqon)

text: total cell-free biofluid RNA

text: Plasma

text: Plasma

text: 2E 02032017


characteristic: INSDC last update

text: live

text: Generic

text: Entire cardiovascular system

text: Citrate

text: Healthy Subject

text: Homo sapiens

text: miRcury biofluids (Exiqon)

text: total cell-free biofluid RNA

text: Plasma

text: Plasma

text: 5C 02032017


text: live

characteristic: INSDC status

text: Generic

text: Entire cardiovascular system

text: EDTA

text: Healthy Subject

text: Homo sapiens

text: miRcury biofluids (Exiqon)

text: total cell-free biofluid RNA

text: Plasma

text: Plasma

text: 5E 02032017


text: live

text: Generic

characteristic: NCBI submission model

text: Entire cardiovascular system

text: Citrate

text: Healthy Subject

text: Homo sapiens

text: miRcury biofluids (Exiqon)

text: total cell-free biofluid RNA

text: Plasma

text: Plasma

text: 2C 02032017


text: live

text: Generic

characteristic: NCBI submission package

text: Entire cardiovascular system

text: Citrate

text: Healthy Subject

text: Homo sapiens

text: miRcury biofluids (Exiqon)

text: total cell-free biofluid RNA

text: Plasma

text: Plasma

text: 6C 02032017


text: live

text: Generic

text: Entire cardiovascular system

characteristic: anatomical location

text: EDTA

text: Healthy Subject

text: Homo sapiens

text: miRcury biofluids (Exiqon)

text: total cell-free biofluid RNA

text: Plasma

text: Plasma

text: 6E 02032017


text: live

text: Generic

text: Entire cardiovascular system

text: Healthy Subject

text: Homo sapiens

text: miRcury biofluids (Exiqon)

text: total cell-free biofluid RNA

text: Serum

text: Serum

text: 2S 02032017


text: live

text: Generic

text: Entire cardiovascular system

text: Citrate

characteristic: anticoagulant

text: Healthy Subject

text: Homo sapiens

text: miRcury biofluids (Exiqon)

text: total cell-free biofluid RNA

text: Plasma

text: Plasma

text: 3C 02032017


text: live

text: Generic

text: Entire cardiovascular system

text: Healthy Subject

characteristic: diagnosis

text: Homo sapiens

text: miRcury biofluids (Exiqon)

text: total cell-free biofluid RNA

text: Serum

text: Serum

text: 3S 02032017


text: live

text: Generic

text: Entire cardiovascular system

text: Citrate

text: Healthy Subject

text: Homo sapiens

text: miRcury biofluids (Exiqon)

characteristic: rna isolation kit

text: total cell-free biofluid RNA

text: Plasma

text: Plasma

text: 4C 02032017


text: live

text: Generic

text: Entire cardiovascular system

text: Healthy Subject

text: Homo sapiens

text: miRcury biofluids (Exiqon)

text: total cell-free biofluid RNA

characteristic: rna source

text: Serum

text: Serum

text: 4S 02032017


characteristic: INSDC secondary accession

text: live

text: Generic

text: Entire cardiovascular system

text: Heparin

text: Healthy Subject

text: Homo sapiens

text: miRcury biofluids (Exiqon)

text: total cell-free biofluid RNA

text: Plasma

text: Plasma

text: 1H 02032017


text: live

text: Generic

characteristic: SRA accession

text: Entire cardiovascular system

text: Heparin

text: Healthy Subject

text: Homo sapiens

text: miRcury biofluids (Exiqon)

text: total cell-free biofluid RNA

text: Plasma

text: Plasma

text: 2H 02032017


text: live

text: Generic

text: Entire cardiovascular system

text: Heparin

text: Healthy Subject

text: Homo sapiens

characteristic: organism

text: miRcury biofluids (Exiqon)

text: total cell-free biofluid RNA

text: Plasma

text: Plasma

text: 6H 02032017


text: live

text: Generic

text: Entire cardiovascular system

text: EDTA

text: Healthy Subject

text: Homo sapiens

text: miRcury biofluids (Exiqon)

text: total cell-free biofluid RNA

text: Plasma

text: Plasma

text: 3E 02032017

characteristic: title


text: live

text: Generic

text: Entire cardiovascular system

text: Heparin

text: Healthy Subject

text: Homo sapiens

text: miRcury biofluids (Exiqon)

text: total cell-free biofluid RNA

text: Plasma

text: Plasma

characteristic: tissue

text: 3H 02032017


characteristic: External Id

text: live

text: Generic

text: Entire cardiovascular system

text: Healthy Subject

text: Homo sapiens

text: miRcury biofluids (Exiqon)

text: total cell-free biofluid RNA

text: Serum

text: Serum

text: 5S 02032017


characteristic: INSDC center name

text: live

text: Generic

text: Entire cardiovascular system

text: EDTA

text: Healthy Subject

text: Homo sapiens

text: miRcury biofluids (Exiqon)

text: total cell-free biofluid RNA

text: Plasma

text: Plasma

text: 4E 02032017


characteristic: INSDC first public

text: live

text: Generic

text: female

characteristic: Sex

text: Entire cardiovascular system

text: Healthy Subject

text: Homo sapiens

text: miRcury biofluids (Exiqon)

text: total cell-free biofluid RNA

text: Plasma

text: Plasma


characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: male

text: Entire cardiovascular system

text: Healthy Subject

text: Homo sapiens

text: miRcury biofluids (Exiqon)

text: total cell-free biofluid RNA

text: Plasma

text: Plasma


text: Helmholtz Institute for RNA-based Infection Research

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: bacteria

characteristic: cell type

text: CspE-FLAG

characteristic: genotype

text: Escherichia coli

text: bacteria

characteristic: strain

text: CspE non-crosslinked replicate 3

characteristic: treatment


characteristic: INSDC secondary accession

text: live

text: Generic

text: bacteria

text: CspE-FLAG

text: Escherichia coli

text: bacteria

text: CspE non-crosslinked replicate 2


text: live

text: Generic

characteristic: SRA accession

text: bacteria

text: CspE-FLAG

text: Escherichia coli

text: bacteria

text: CspE non-crosslinked replicate 1


text: live

text: Generic

text: bacteria

text: CspE-FLAG

text: Escherichia coli

characteristic: organism

text: bacteria

text: CspE crosslinked replicate 3

text: UV cross-linked


text: live

text: Generic

text: bacteria

text: CspE-FLAG

text: Escherichia coli

text: bacteria

text: CspE crosslinked replicate 2

characteristic: title

text: UV cross-linked


text: live

text: Generic

text: bacteria

text: CspE-FLAG

text: Escherichia coli

text: bacteria

text: CspE crosslinked replicate 1

text: UV cross-linked


text: live

text: Generic

text: bacteria

text: CspC-FLAG

text: Escherichia coli

text: bacteria

text: CspC non-crosslinked replicate 3


text: live

text: Generic

text: bacteria

text: CspC-FLAG

text: Escherichia coli

text: bacteria

text: CspC non-crosslinked replicate 2


text: live

text: Generic

text: bacteria

text: CspC-FLAG

text: Escherichia coli

text: bacteria

text: CspC non-crosslinked replicate 1


text: live

text: Generic

text: bacteria

text: CspC-FLAG

text: Escherichia coli

text: bacteria

text: CspC crosslinked replicate 3

text: UV cross-linked


text: live

text: Generic

text: bacteria

text: CspC-FLAG

text: Escherichia coli

text: bacteria

text: CspC crosslinked replicate 2

text: UV cross-linked


text: live

text: Generic

text: bacteria

text: CspC-FLAG

text: Escherichia coli

text: bacteria

text: CspC crosslinked replicate 1

text: UV cross-linked


Gordonia phage GrootJr

text: University of Pittsburgh

text: live

text: Viral

text: USA: Crete, NE

text: Gordonia terrae 3612

characteristic: host

text: Katelyn Jindra and Ashley Marsh

characteristic: isolate

text: soil

text: Gordonia phage GrootJr

text: Viral sample from Gordonia phage GrootJr


Mycobacterium phage IgnatiusPatJac

characteristic: External Id

text: University of Pittsburgh

characteristic: INSDC center name

text: live

text: Viral

text: South Africa: Johannesburg

text: Mycolicibacterium smegmatis mc155

text: Olivia Jacobs

text: soil

text: Mycobacterium phage IgnatiusPatJac

text: Viral sample from Mycobacterium phage IgnatiusPatJac


Arthrobacter phage Klevey

text: University of Pittsburgh

characteristic: INSDC first public

text: live

text: Viral

text: USA: Pueblo, CO

text: Arthrobacter globiformis B-2979

text: Auremie Kleven

text: soil

text: Arthrobacter phage Klevey

text: Viral sample from Arthrobacter phage Klevey


Mycobacterium phage Langerak

text: University of Pittsburgh

characteristic: INSDC last update

text: live

text: Viral

text: USA: Holland, MI

text: Mycolicibacterium smegmatis mc155

text: Dale Schipper

text: soil

text: Mycobacterium phage Langerak

text: Viral sample from Mycobacterium phage Langerak


Arthrobacter phage Lilmac1015

text: University of Pittsburgh

text: live

characteristic: INSDC status

text: Viral

text: USA: Pueblo, CO

text: Arthrobacter globiformis B-2979

text: Amanda Inman

text: soil

text: Arthrobacter phage Lilmac1015

text: Viral sample from Arthrobacter phage Lilmac1015


Gordonia phage NovumRegina

text: University of Pittsburgh

text: live

text: Viral

characteristic: NCBI submission model

text: USA: Crete, NE

text: Gordonia terrae 3612

text: Morgan Queen and Daniela Frey

text: soil

text: Gordonia phage NovumRegina

text: Viral sample from Gordonia phage NovumRegina


Arthrobacter phage Prairie

text: University of Pittsburgh

text: live

text: Viral

characteristic: NCBI submission package

text: USA: Pueblo, CO

text: Arthrobacter globiformis B-2979

text: Brittany Bohn

text: soil

text: Arthrobacter phage Prairie

text: Viral sample from Arthrobacter phage Prairie


Mycobacterium phage Rita

text: University of Pittsburgh

text: live

text: Viral

text: USA: North Easton, MA

text: Mycolicibacterium smegmatis mc155

text: Anna Fakhri

text: soil

text: Mycobacterium phage Rita

text: Viral sample from Mycobacterium phage Rita


text: Utah Public Health Laboratory Infectious Disease submission group

text: live

text: SARS-CoV-2: wastewater surveillance

text: USA: Utah

text: wastewater

text: wastewater metagenome

text: public health surveillance community-level

text: characterize diversity of lineages and mutations across entire genome

text: UPHL

text: SARS-CoV-2: wastewater surveillance sample from wastewater metagenome

text: no

text: Promega wastewater large volume TNA capture kit,Promega automated TNA kit

text: raw wastewater

text: wastewater treatment plant

text: composite

text: UT

text: copies/L wastewater

text: N1 & N2 combined

text: no

text: IDT Research Use Only Kit (https://www.idtdna.com/pages/landing/coronavirus-research-reagents/cdc-assays)


text: live

text: SARS-CoV-2: wastewater surveillance

text: USA: Utah

text: wastewater

text: wastewater metagenome

text: UPHL

text: no

text: raw wastewater

text: wastewater treatment plant

text: grab

text: UT

text: copies/L wastewater

text: N1 & N2 combined

text: no


text: IMBE, SGUL

text: live

text: Generic

characteristic: cell line

text: Breast epithelial cells

characteristic: cell type

text: Cell line

text: Homo sapiens

text: Breast

text: Breast

characteristic: tissue

text: Doxycyline


text: IMBE, SGUL

text: live

text: Generic

text: Breast epithelial cells

text: Cell line

characteristic: genotype

text: Homo sapiens

text: Breast

text: Breast

text: No doxycyline

characteristic: treatment


Peronosclerospora sorghi isolate P6

text: UC Davis Genome Center

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: UC Davis: Michelmore lab

text: Tom Isakeit

text: Pathotype P6 isolate of Peronosclerospora sorghi

characteristic: description

text: USA: Texas

text: Sorghum bicolor

text: Peronosclerospora sorghi

text: Sporangia

text: Microbe sample from Peronosclerospora sorghi


text: shanghai ninth people hospital

text: live

text: Generic

text: Homo sapiens

characteristic: organism

text: human temporomandibular joint

text: human temporomandibular joint

text: Synovium,reducible anterior disc displacement,rep5

characteristic: title


characteristic: External Id

text: shanghai ninth people hospital

text: live

text: Generic

text: Homo sapiens

text: human temporomandibular joint

text: human temporomandibular joint


text: shanghai ninth people hospital

characteristic: INSDC center name

text: live

text: Generic

text: Homo sapiens

text: human temporomandibular joint

text: human temporomandibular joint

text: Synovium,reducible anterior disc displacement,rep4


text: shanghai ninth people hospital

characteristic: INSDC first public

text: live

text: Generic

text: Homo sapiens

text: human temporomandibular joint

text: human temporomandibular joint

text: Synovium,reducible anterior disc displacement,rep3


text: shanghai ninth people hospital

characteristic: INSDC last update

text: live

text: Generic

text: Homo sapiens

text: human temporomandibular joint

text: human temporomandibular joint

text: Synovium,reducible anterior disc displacement,rep2


text: shanghai ninth people hospital

text: live

characteristic: INSDC status

text: Generic

text: Homo sapiens

text: human temporomandibular joint

text: human temporomandibular joint

text: Synovium,reducible anterior disc displacement,rep1


text: CDC

text: live

text: USA

text: Pathogen.cl

characteristic: NCBI submission model

text: missing

text: missing

text: Enterobacter

characteristic: genus

text: USA

text: Homo sapiens

characteristic: host

text: missing

text: missing

characteristic: isolate

text: missing

text: missing

text: Enterobacter cloacae

text: Pathogen: clinical or host-associated sample from Enterobacter cloacae

type: AMR curated data - CABBAGE

value: ciprofloxacin

value: resistant

value: Enterobacter cloacae

value: eravacycline

value: non-susceptible

value: nitrofurantoin

value: cefotaxime-clavulanic acid

value: mg/L

value: aztreonam

value: plazomicin

value: susceptible

value: ampicillin-sulbactam

value: CLSI

value: meropenem-vaborbactam

value: omadacycline

value: intermediate

value: cefepime

value: ceftazidime-avibactam

value: ertapenem

value: meropenem

value: ceftriaxone

value: gentamicin

value: cefotaxime

value: cefoxitin

value: imipenem

value: minocycline

value: tigecycline

value: colistin

value: ceftolozane-tazobactam

value: imipenem-relebactam


text: CDC

text: live

text: USA

text: Pathogen.cl

characteristic: NCBI submission package

text: missing

text: missing

text: Enterobacter

text: USA

text: Homo sapiens

text: missing

text: missing

text: missing

text: missing

text: Enterobacter cloacae

value: susceptible

value: Enterobacter cloacae

value: CLSI

value: mg/L

value: resistant

value: ciprofloxacin

value: cefepime-zidebactam

value: ampicillin

value: piperacillin-tazobactam

value: susceptible-dose dependent

value: nitrofurantoin

value: aztreonam

value: tetracycline

value: Imipenem-EDTA-PA

value: plazomicin

value: ceftazidime

value: amikacin

value: tobramycin


text: CDC

text: live

text: USA

text: Pathogen.cl

text: missing

text: missing

text: Providencia

text: USA

text: Homo sapiens

text: missing

text: missing

text: missing

text: missing

text: Providencia rettgeri

text: Pathogen: clinical or host-associated sample from Providencia rettgeri

value: tigecycline

value: Providencia rettgeri

value: susceptible

value: colistin

value: ertapenem

value: cefoxitin

value: meropenem

value: intermediate

value: cefotaxime

value: meropenem-vaborbactam

value: minocycline

value: levofloxacin

value: ceftolozane-tazobactam

value: cefiderocol

type: AMR

value: MIC

value: 96-Well Plate


text: CDC

text: live

text: USA

text: Pathogen.cl

text: missing

text: missing

text: Pseudomonas

text: USA

text: Homo sapiens

text: missing

text: missing

text: missing

text: missing

text: Pseudomonas aeruginosa

text: Pathogen: clinical or host-associated sample from Pseudomonas aeruginosa

value: cefepime

value: resistant

value: Pseudomonas aeruginosa

value: imipenem

value: imipenem-relebactam

value: CLSI

value: mg/L

value: amikacin

value: delafloxacin

value: ciprofloxacin

value: Imipenem-EDTA-PA

value: gentamicin

value: cefepime-zidebactam

value: aztreonam

value: tobramycin

value: piperacillin-tazobactam

value: ceftazidime

value: ceftazidime-avibactam


text: CDC

text: live

text: USA

text: Pathogen.cl

text: missing

text: missing

text: Providencia

text: USA

text: Homo sapiens

text: missing

text: missing

text: missing

text: missing

text: Providencia rettgeri

value: trimethoprim-sulfamethoxazole

value: resistant

value: Providencia rettgeri

value: cefiderocol

value: susceptible

value: cefoxitin

value: meropenem

value: tigecycline

value: intermediate

value: tetracycline

value: ceftolozane-tazobactam

value: ertapenem

value: plazomicin

value: colistin

value: levofloxacin

value: minocycline

value: cefepime

value: nitrofurantoin

value: ceftriaxone


text: CDC

text: live

text: USA

text: Pathogen.cl

text: missing

text: missing

text: Pseudomonas

text: USA

text: Homo sapiens

text: missing

text: missing

text: missing

text: missing

text: Pseudomonas aeruginosa

value: ceftazidime

value: resistant

value: Pseudomonas aeruginosa

value: delafloxacin

value: ceftazidime-avibactam

value: CLSI

value: mg/L

value: ciprofloxacin

value: amikacin

value: imipenem-relebactam

value: Imipenem-EDTA-PA

value: piperacillin-tazobactam

value: gentamicin

value: tobramycin

value: aztreonam

value: imipenem

value: not defined

value: MIC

value: 96-Well Plate


text: CDC

text: live

text: USA

text: Pathogen.cl

text: missing

text: missing

text: Pseudomonas

text: USA

text: Homo sapiens

text: missing

text: missing

text: missing

text: missing

text: Pseudomonas aeruginosa

value: meropenem

value: resistant

value: Pseudomonas aeruginosa

value: intermediate

value: cefepime

value: cefepime-zidebactam

value: ceftazidime

value: cefiderocol

value: susceptible

value: colistin

value: ceftolozane-tazobactam

value: levofloxacin


text: CDC

text: live

text: USA

text: Pathogen.cl

text: missing

text: missing

text: Pseudomonas

text: USA

text: Homo sapiens

text: missing

text: missing

text: missing

text: missing

text: Pseudomonas aeruginosa

value: Imipenem-EDTA-PA

value: mg/L

value: gentamicin

value: amikacin

value: delafloxacin

value: ceftazidime-avibactam

value: CLSI

value: aztreonam

value: imipenem-relebactam

value: tobramycin

value: ciprofloxacin


text: CDC

text: live

text: USA

text: Pathogen.cl

text: missing

text: missing

text: Proteus

text: USA

text: Homo sapiens

text: missing

text: missing

text: missing

text: missing

text: Proteus mirabilis

text: Pathogen: clinical or host-associated sample from Proteus mirabilis

value: meropenem

value: resistant

value: Proteus mirabilis

value: ampicillin-sulbactam

value: minocycline

value: tetracycline

value: meropenem-vaborbactam

value: trimethoprim-sulfamethoxazole

value: nitrofurantoin

value: ampicillin

value: cefepime-zidebactam

value: piperacillin-tazobactam

value: tigecycline

value: plazomicin

value: intermediate

value: ceftazidime-clavulanic acid

value: imipenem

value: ertapenem


text: Utah Public Health Laboratory Infectious Disease submission group

text: live

text: SARS-CoV-2: clinical or host-associated

text: Utah Public Health Laboratory

text: USA: Utah

text: Homo sapiens

text: patient isolate

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2