text: Utah Public Health Laboratory Infectious Disease submission group

text: live

text: SARS-CoV-2: clinical or host-associated

text: Utah Public Health Laboratory

text: USA: Utah

text: Homo sapiens

text: patient isolate


status: PUBLIC

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Utah Public Health Laboratory

tag: attribute

text: USA: Utah

text: Homo sapiens

characteristic: host

characteristic: isolate

text: patient isolate

characteristic: organism

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2

characteristic: title


text: UW Madison

text: live

text: SARS-CoV-2: clinical or host-associated

text: UWHC

text: USA: Wisconsin, Dane County

text: Homo sapiens

text: Homo sapien

text: nasal swab

text: Severe acute respiratory syndrome coronavirus 2


text: UW Madison

text: live

text: SARS-CoV-2: clinical or host-associated

text: UWHC

text: USA: Wisconsin, Sauk County

text: Homo sapiens

text: Homo sapien

text: nasal swab


text: UW Madison

text: live

text: SARS-CoV-2: clinical or host-associated

text: UWHC

text: USA: Wisconsin, Rock County

text: Homo sapiens

text: Homo sapien

text: nasal swab


text: Neurogenesis and Neurogenetics, Biological Sciences, Clemson University

text: live

text: Generic

text: Tsc2 mut/mut

characteristic: genotype

text: Mus musculus

text: olfactory bulb

text: olfactory bulb

characteristic: tissue

text: CON

characteristic: treatment


text: live

text: Generic

text: Tsc2 mut/mut

text: Mus musculus

text: olfactory bulb

text: olfactory bulb

text: tamoxifen


text: Mississippi Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: MS PHL

text: USA: Mississippi

text: Homo sapiens

text: male

text: human

text: baseline surveillance

text: baseline surveillance

text: MS PHL


text: Mississippi Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: MS PHL

text: USA: Mississippi

text: Homo sapiens

text: female

text: human

text: baseline surveillance

text: baseline surveillance

text: MS PHL


characteristic: Generation

text: University of South Bohemia

text: live

text: Metagenome or environmental

text: lab

characteristic: Origin

characteristic: Plate

text: Sample

text: pupae

characteristic: Stage

characteristic: Trap

characteristic: WellPosition

text: Czech Republic: Hrcek Lab

text: Drosophila rubida

text: Drosophila pupae

text: Lab

text: missing

text: insect metagenome

text: Metagenome or environmental sample from insect metagenome


characteristic: External Id

text: University of South Bohemia

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: lab

text: Sample

text: pupae

text: Czech Republic: Hrcek Lab

text: Drosophila sulfurigaster

text: Drosophila pupae

text: Lab

text: missing

text: insect metagenome


text: University of South Bohemia

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: lab

characteristic: SRA accession

text: Sample

text: pupae

text: Czech Republic: Hrcek Lab

text: Drosophila pallidifrons

characteristic: host

text: Drosophila pupae

text: Lab

text: missing

text: insect metagenome

characteristic: organism


characteristic: Generation

text: University of South Bohemia

text: live

text: Metagenome or environmental

text: lab

text: Sample

text: pupae

text: Czech Republic: Hrcek Lab

text: Drosophila pseudoananassae

text: Drosophila pupae

text: Lab

text: missing

text: insect metagenome

characteristic: tissue

characteristic: title


text: University of South Bohemia

text: live

text: Metagenome or environmental

text: lab

characteristic: Origin

characteristic: Plate

text: Sample

text: adult

characteristic: Stage

text: Czech Republic: Hrcek Lab

text: Drosophila rubida

text: Drosophila adult

text: Lab

text: missing

text: insect metagenome


characteristic: External Id

text: University of South Bohemia

text: live

text: Metagenome or environmental

text: lab

text: Sample

text: adult

characteristic: Trap

characteristic: WellPosition

text: Czech Republic: Hrcek Lab

text: Drosophila sulfurigaster

text: Drosophila adult

text: Lab

text: missing

text: insect metagenome


text: University of South Bohemia

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: lab

text: Sample

text: adult

text: Czech Republic: Hrcek Lab

text: Drosophila pallidifrons

text: Drosophila adult

text: Lab

text: missing

text: insect metagenome


text: University of South Bohemia

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

text: lab

text: Sample

text: adult

text: Czech Republic: Hrcek Lab

text: Drosophila pseudoananassae

text: Drosophila adult

text: Lab

text: missing

text: insect metagenome


text: University of South Bohemia

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: field

characteristic: SRA accession

text: Sample

text: pupae

text: Australia: Queensland, Kirrama, Lowlands

text: Drosophila pallidifrons

characteristic: host

text: Field

text: Drosophila pupae

text: missing

text: insect metagenome


characteristic: Generation

text: University of South Bohemia

text: live

text: Metagenome or environmental

text: field

text: Sample

text: pupae

text: Australia: Queensland, Kirrama, Highlands

text: Drosophila pallidifrons

text: Field

text: Drosophila pupae

text: missing

text: insect metagenome

characteristic: organism

characteristic: tissue


text: University of South Bohemia

text: live

text: Metagenome or environmental

text: field

characteristic: Origin

characteristic: Plate

text: Sample

text: pupae

text: Australia: Queensland, Paluma, Lowlands

text: Drosophila pallidifrons

text: Field

text: Drosophila pupae

text: missing

text: insect metagenome

characteristic: title


characteristic: External Id

text: University of South Bohemia

text: live

text: Metagenome or environmental

text: field

text: Sample

text: pupae

characteristic: Stage

characteristic: Trap

text: Australia: Queensland, Paluma, Highlands

text: Drosophila pallidifrons

text: Field

text: Drosophila pupae

text: missing

text: insect metagenome


text: University of South Bohemia

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: field

text: Sample

text: pupae

characteristic: WellPosition

text: Drosophila pseudoananassae

text: Field

text: Drosophila pupae

text: missing

text: insect metagenome


text: University of South Bohemia

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: field

text: Sample

text: pupae

text: Drosophila pseudoananassae

text: Field

text: Drosophila pupae

text: missing

text: insect metagenome


text: University of South Bohemia

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: field

characteristic: SRA accession

text: Sample

text: pupae

text: Australia: Queensland, Paluma, Lowlands

text: Drosophila pseudoananassae

text: Field

text: Drosophila pupae

text: missing

text: insect metagenome


characteristic: Generation

text: University of South Bohemia

text: live

text: Metagenome or environmental

text: field

text: Sample

text: pupae

text: Drosophila pseudoananassae

characteristic: host

text: Field

text: Drosophila pupae

text: missing

text: insect metagenome

characteristic: organism


text: University of South Bohemia

text: live

text: Metagenome or environmental

text: field

characteristic: Origin

characteristic: Plate

text: Sample

text: pupae

text: Drosophila rubida

text: Field

text: Drosophila pupae

text: missing

text: insect metagenome

characteristic: tissue


characteristic: External Id

text: University of South Bohemia

text: live

text: Metagenome or environmental

text: field

text: Sample

text: pupae

characteristic: Stage

text: Drosophila rubida

text: Field

text: Drosophila pupae

text: missing

text: insect metagenome

characteristic: title


text: University of South Bohemia

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: field

text: Sample

text: pupae

characteristic: Trap

text: Australia: Queensland, Paluma, Lowlands

text: Drosophila rubida

text: Field

text: Drosophila pupae

text: missing

text: insect metagenome


text: University of South Bohemia

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: field

text: Sample

text: pupae

characteristic: WellPosition

text: Drosophila rubida

text: Field

text: Drosophila pupae

text: missing

text: insect metagenome


text: University of South Bohemia

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: field

text: Sample

text: pupae

text: Drosophila sulfurigaster

text: Field

text: Drosophila pupae

text: missing

text: insect metagenome


characteristic: Generation

text: University of South Bohemia

text: live

text: Metagenome or environmental

text: field

characteristic: SRA accession

text: Sample

text: pupae

text: Drosophila sulfurigaster

characteristic: host

text: Field

text: Drosophila pupae

text: missing

text: insect metagenome


text: University of South Bohemia

text: live

text: Metagenome or environmental

text: field

characteristic: Origin

characteristic: Plate

text: Sample

text: pupae

text: Australia: Queensland, Paluma, Lowlands

text: Drosophila sulfurigaster

text: Field

text: Drosophila pupae

text: missing

text: insect metagenome

characteristic: organism


characteristic: External Id

text: University of South Bohemia

text: live

text: Metagenome or environmental

text: field

text: Sample

text: pupae

characteristic: Stage

text: Drosophila sulfurigaster

text: Field

text: Drosophila pupae

text: missing

text: insect metagenome

characteristic: tissue


text: University of South Bohemia

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: field

text: Sample

text: bait

text: Australia: Queensland, Townsville, James Cook University

text: Field

text: missing

text: metagenome

text: Metagenome or environmental sample from metagenome

characteristic: title


text: University of South Bohemia

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: lab

text: Sample

text: bait

characteristic: Trap

text: Czech Republic: Hrcek Lab

text: Lab

text: missing

text: metagenome


text: University of South Bohemia

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

text: field

text: adult

characteristic: WellPosition

text: Drosophila rubida

text: Drosophila adult

text: Field

text: missing

text: insect metagenome


characteristic: Generation

text: University of South Bohemia

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: field

characteristic: SRA accession

text: pupae

text: Drosophila rubida

text: Field

text: Drosophila pupae

text: missing

text: insect metagenome


text: University of South Bohemia

text: live

text: Metagenome or environmental

text: field

characteristic: Origin

characteristic: Plate

text: pupae

text: Drosophila rubida

characteristic: host

text: Field

text: Drosophila pupae

text: missing

text: insect metagenome


characteristic: External Id

text: University of South Bohemia

text: live

text: Metagenome or environmental

text: field

text: pupae

characteristic: Stage

text: Drosophila rubida

text: Field

text: Drosophila pupae

text: missing

text: insect metagenome

characteristic: organism


text: University of South Bohemia

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: missing

text: metagenome

characteristic: tissue


text: Center for Applied Genomics and Precision Medicine, Duke University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: female

characteristic: Sex

characteristic: age

text: peripheral blood mononuclear cells

characteristic: cell type

text: Healthy

characteristic: exposure

characteristic: library

text: Homo sapiens

text: Healthy

characteristic: serostatus

text: peripheral blood mononuclear cells

characteristic: time

text: 655A91, NA, Healthy, Healthy [scRNA-Seq]

characteristic: title


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: male

text: peripheral blood mononuclear cells

text: Healthy

text: Homo sapiens

text: Healthy

text: peripheral blood mononuclear cells

text: 52BA23, NA, Healthy, Healthy [scRNA-Seq]


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: female

text: peripheral blood mononuclear cells

text: Healthy

text: Homo sapiens

characteristic: organism

text: Healthy

text: peripheral blood mononuclear cells

text: 94D44E, NA, Healthy, Healthy [scRNA-Seq]


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: female

text: peripheral blood mononuclear cells

text: Healthy

text: Homo sapiens

text: Healthy

text: peripheral blood mononuclear cells

text: 3F3322, NA, Healthy, Healthy [scRNA-Seq]


characteristic: INSDC secondary accession

text: live

text: Generic

text: female

characteristic: Sex

text: peripheral blood mononuclear cells

text: Healthy

text: Homo sapiens

text: Healthy

text: peripheral blood mononuclear cells

text: E0FA1E, NA, Healthy, Healthy [scRNA-Seq]


text: live

text: Generic

text: female

characteristic: age

text: peripheral blood mononuclear cells

characteristic: cell type

text: Severe

text: Homo sapiens

text: Positive

text: peripheral blood mononuclear cells

text: 0BF51C, 14, Severe, Positive [scRNA-Seq]


text: live

text: Generic

text: female

text: peripheral blood mononuclear cells

text: Severe

characteristic: exposure

characteristic: library

text: Homo sapiens

text: Positive

text: peripheral blood mononuclear cells

text: 0BF51C, 7, Severe, Positive [scRNA-Seq]


text: live

text: Generic

text: female

text: peripheral blood mononuclear cells

text: Severe

text: Homo sapiens

text: Negative

characteristic: serostatus

text: peripheral blood mononuclear cells

characteristic: time

text: 0BF51C, 0, Severe, Negative [scRNA-Seq]


text: live

characteristic: INSDC status

text: Generic

text: male

text: peripheral blood mononuclear cells

text: Exposed

text: Homo sapiens

text: Exposed

text: peripheral blood mononuclear cells

text: 80A16A, 14, Exposed, Exposed [scRNA-Seq]

characteristic: title


text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: male

text: peripheral blood mononuclear cells

text: Exposed

text: Homo sapiens

text: Exposed

text: peripheral blood mononuclear cells

text: 80A16A, 0, Exposed, Exposed [scRNA-Seq]


characteristic: External Id

text: live

text: Generic

characteristic: SRA accession

text: male

text: peripheral blood mononuclear cells

text: Severe

text: Homo sapiens

text: Negative

text: peripheral blood mononuclear cells

text: 40067F, 14, Severe, Negative [scRNA-Seq]


characteristic: INSDC center name

text: live

text: Generic

text: male

text: peripheral blood mononuclear cells

text: Severe

text: Homo sapiens

characteristic: organism

text: Negative

text: peripheral blood mononuclear cells

text: 40067F, 0, Severe, Negative [scRNA-Seq]


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: male

text: peripheral blood mononuclear cells

text: Exposed

text: Homo sapiens

text: Exposed

text: peripheral blood mononuclear cells

text: 61BBAD, 14, Exposed, Exposed [scRNA-Seq]


characteristic: INSDC secondary accession

text: live

text: Generic

text: male

characteristic: Sex

text: peripheral blood mononuclear cells

text: Exposed

text: Homo sapiens

text: Exposed

text: peripheral blood mononuclear cells

text: 61BBAD, 7, Exposed, Exposed [scRNA-Seq]


text: live

text: Generic

text: male

characteristic: age

text: peripheral blood mononuclear cells

characteristic: cell type

text: Exposed

text: Homo sapiens

text: Exposed

text: peripheral blood mononuclear cells

text: 61BBAD, 0, Exposed, Exposed [scRNA-Seq]


text: live

text: Generic

text: male

text: peripheral blood mononuclear cells

text: Mild

characteristic: exposure

characteristic: library

text: Homo sapiens

text: Positive

text: peripheral blood mononuclear cells

text: BAAF62, 14, Mild, Positive [scRNA-Seq]


text: live

text: Generic

text: male

text: peripheral blood mononuclear cells

text: Mild

text: Homo sapiens

text: Positive

characteristic: serostatus

text: peripheral blood mononuclear cells

characteristic: time

text: BAAF62, 7, Mild, Positive [scRNA-Seq]


text: live

characteristic: INSDC status

text: Generic

text: male

text: peripheral blood mononuclear cells

text: Mild

text: Homo sapiens

text: Negative

text: peripheral blood mononuclear cells

text: BAAF62, 0, Mild, Negative [scRNA-Seq]

characteristic: title


text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: female

text: peripheral blood mononuclear cells

text: Severe

text: Homo sapiens

text: Positive

text: peripheral blood mononuclear cells

text: 82CCF5, 14, Severe, Positive [scRNA-Seq]


characteristic: External Id

text: live

text: Generic

characteristic: SRA accession

text: female

text: peripheral blood mononuclear cells

text: Severe

text: Homo sapiens

text: Positive

text: peripheral blood mononuclear cells

text: 82CCF5, 7, Severe, Positive [scRNA-Seq]


characteristic: INSDC center name

text: live

text: Generic

text: female

text: peripheral blood mononuclear cells

text: Severe

text: Homo sapiens

characteristic: organism

text: Negative

text: peripheral blood mononuclear cells

text: 82CCF5, 0, Severe, Negative [scRNA-Seq]


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: female

text: peripheral blood mononuclear cells

text: Severe

text: Homo sapiens

text: Positive

text: peripheral blood mononuclear cells

text: 180E1A, 14, Severe, Positive [scRNA-Seq]


characteristic: INSDC secondary accession

text: live

text: Generic

text: female

characteristic: Sex

text: peripheral blood mononuclear cells

text: Severe

text: Homo sapiens

text: Positive

text: peripheral blood mononuclear cells

text: 180E1A, 7, Severe, Positive [scRNA-Seq]


text: live

text: Generic

text: female

characteristic: age

text: peripheral blood mononuclear cells

characteristic: cell type

text: Severe

text: Homo sapiens

text: Negative

text: peripheral blood mononuclear cells

text: 180E1A, 0, Severe, Negative [scRNA-Seq]


text: live

text: Generic

text: female

text: peripheral blood mononuclear cells

text: Severe

characteristic: exposure

characteristic: library

text: Homo sapiens

text: Positive

text: peripheral blood mononuclear cells

text: B85D75, 7, Severe, Positive [scRNA-Seq]


text: live

text: Generic

text: female

text: peripheral blood mononuclear cells

text: Severe

text: Homo sapiens

text: Negative

characteristic: serostatus

text: peripheral blood mononuclear cells

characteristic: time

text: B85D75, 0, Severe, Negative [scRNA-Seq]


text: live

characteristic: INSDC status

text: Generic

text: male

text: peripheral blood mononuclear cells

text: Mild

text: Homo sapiens

text: Positive

text: peripheral blood mononuclear cells

text: 2AD75E, 14, Mild, Positive [scRNA-Seq]

characteristic: title


text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: male

text: peripheral blood mononuclear cells

text: Mild

text: Homo sapiens

text: Negative

text: peripheral blood mononuclear cells

text: 2AD75E, 7, Mild, Negative [scRNA-Seq]


characteristic: External Id

text: live

text: Generic

characteristic: SRA accession

text: male

text: peripheral blood mononuclear cells

text: Mild

text: Homo sapiens

text: Negative

text: peripheral blood mononuclear cells

text: 2AD75E, 0, Mild, Negative [scRNA-Seq]


characteristic: INSDC center name

text: live

text: Generic

text: male

text: peripheral blood mononuclear cells

text: Mild

text: Homo sapiens

characteristic: organism

text: Positive

text: peripheral blood mononuclear cells

text: 7085CA, 14, Mild, Positive [scRNA-Seq]


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: male

text: peripheral blood mononuclear cells

text: Mild

text: Homo sapiens

text: Negative

text: peripheral blood mononuclear cells

text: 7085CA, 7, Mild, Negative [scRNA-Seq]


characteristic: INSDC secondary accession

text: live

text: Generic

text: male

characteristic: Sex

text: peripheral blood mononuclear cells

text: Mild

text: Homo sapiens

text: Negative

text: peripheral blood mononuclear cells

text: 7085CA, 0, Mild, Negative [scRNA-Seq]


text: live

text: Generic

text: male

characteristic: age

text: peripheral blood mononuclear cells

characteristic: cell type

text: Mild

text: Homo sapiens

text: Positive

text: peripheral blood mononuclear cells

text: 0B943B, 14, Mild, Positive [scRNA-Seq]


text: live

text: Generic

text: male

text: peripheral blood mononuclear cells

text: Mild

characteristic: exposure

characteristic: library

text: Homo sapiens

text: Negative

text: peripheral blood mononuclear cells

text: 0B943B, 3, Mild, Negative [scRNA-Seq]


text: live

text: Generic

text: male

text: peripheral blood mononuclear cells

text: Mild

text: Homo sapiens

text: Negative

characteristic: serostatus

text: peripheral blood mononuclear cells

characteristic: time

text: 0B943B, 0, Mild, Negative [scRNA-Seq]


text: live

characteristic: INSDC status

text: Generic

text: female

text: peripheral blood mononuclear cells

text: Exposed

text: Homo sapiens

text: Exposed

text: peripheral blood mononuclear cells

text: 7768E4, 28, Exposed, Exposed [scRNA-Seq]

characteristic: title


text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: female

text: peripheral blood mononuclear cells

text: Exposed

text: Homo sapiens

text: Exposed

text: peripheral blood mononuclear cells

text: 7768E4, 14, Exposed, Exposed [scRNA-Seq]


characteristic: External Id

text: live

text: Generic

characteristic: SRA accession

text: female

text: peripheral blood mononuclear cells

text: Exposed

text: Homo sapiens

text: Exposed

text: peripheral blood mononuclear cells

text: 7768E4, 2, Exposed, Exposed [scRNA-Seq]


characteristic: INSDC center name

text: live

text: Generic

text: male

text: peripheral blood mononuclear cells

text: Mild

text: Homo sapiens

characteristic: organism

text: Positive

text: peripheral blood mononuclear cells

text: 450905, 14, Mild, Positive [scRNA-Seq]


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: male

text: peripheral blood mononuclear cells

text: Mild

text: Homo sapiens

text: Positive

text: peripheral blood mononuclear cells

text: 450905, 7, Mild, Positive [scRNA-Seq]


characteristic: INSDC secondary accession

text: live

text: Generic

text: male

characteristic: Sex

text: peripheral blood mononuclear cells

text: Mild

text: Homo sapiens

text: Negative

text: peripheral blood mononuclear cells

text: 450905, 0, Mild, Negative [scRNA-Seq]


text: FDA CVM NARMS - Tennesse DOH

text: live

characteristic: MLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

characteristic: host

characteristic: isolate

text: urine

text: Enterobacter cloacae complex

text: whole organism

text: not collected

characteristic: strain

text: Microbe sample from Enterobacter cloacae complex


text: FDA CVM NARMS - Tennesse DOH

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: wound

text: Enterobacter cloacae complex

text: whole organism

text: not collected


text: FDA CVM NARMS - Tennesse DOH

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: urine

text: Acinetobacter baumannii

text: whole organism

text: not collected

text: Microbe sample from Acinetobacter baumannii


text: Ludwig Maximilian University of Munich (Universität München)

text: live

text: Generic

text: E10.5 heads

characteristic: cell type

text: GFP (sc-9996)

characteristic: chip antibody

text: Mus musculus

text: E10.5 heads


text: NJ DOH PHEL wastewater submission group

text: live

characteristic: INSDC status

text: SARS-CoV-2: wastewater surveillance

text: New Jersey State Department of Health

text: 1 L

text: ceres nanotrap

text: Murine norovirus

text: qiagen allprep powerviral dna/rna kit

text: USA: New Jersey

text: wastewater

text: wastewater metagenome

text: GenomeTrakr; LFFM ww project

text: public health surveillance community-level

text: detection of target by RT PCR or ddPCR

text: New Jersey State Department of Health

text: technical replicate

text: SARS-CoV-2: wastewater surveillance sample from Wastewater metagenome

characteristic: title

text: crassphage

text: RT-qPCR Detection of crAssphage from Wastewater using AB 7500

text: cycles (Ct value)

text: population of jurisdiction encompassing the wastewater service area

text: raw wastewater

text: wastewater treatment plant

text: composite

text: cycles (Ct value)

text: N gene (N1)

text: no

text: RT-qPCR Detection of SARS-CoV-2 from Wastewater Using the AB 7500 (protocols.io)

text: cycles (Ct value)

text: N gene (N2)

text: no


text: NJ DOH PHEL wastewater submission group

text: live

text: SARS-CoV-2: wastewater surveillance

characteristic: NCBI submission model

characteristic: NCBI submission package

text: New Jersey State Department of Health

text: 1 L

text: ceres nanotrap

text: Murine norovirus

text: qiagen allprep powerviral dna/rna kit

text: USA: New Jersey

text: wastewater

text: wastewater metagenome

text: GenomeTrakr; LFFM ww project

text: detection of target by RT PCR or ddPCR

text: New Jersey State Department of Health

text: technical replicate

text: crassphage

text: cycles (Ct value)

text: Bar Screen and Grit Removal

text: 12-24 hours

text: raw wastewater

text: wastewater treatment plant

text: composite

text: cycles (Ct value)

text: N gene (N1)

text: no

text: cycles (Ct value)

text: N gene (N2)

text: no


MRSN 31307

characteristic: External Id

text: Walter Reed Army Institute of Research

text: live

text: Pathogen.cl

text: MRSN (WRAIR)

text: USA: Bethesda

text: Homo sapiens

text: Unknown

text: male

text: wound

text: 38.984722 N 77.113056 W

text: Klebsiella pneumoniae

text: MRSN 31307

text: Pathogen: clinical or host-associated sample from Klebsiella pneumoniae


MRSN 31314

text: Walter Reed Army Institute of Research

characteristic: INSDC center name

text: live

text: Pathogen.cl

text: MRSN (WRAIR)

text: USA: Bethesda

text: Homo sapiens

text: Unknown

text: Sterile Body Site

text: 38.984722 N 77.113056 W

text: Klebsiella pneumoniae

text: MRSN 31314


MRSN 31330

text: Walter Reed Army Institute of Research

text: live

text: Pathogen.cl

text: MRSN (WRAIR)

text: USA: Bethesda

text: Homo sapiens

text: Unknown

text: male

text: blood

text: 38.984722 N 77.113056 W

text: Klebsiella pneumoniae

characteristic: organism

text: MRSN 31330


MRSN 31332

text: Walter Reed Army Institute of Research

characteristic: INSDC first public

text: live

text: Pathogen.cl

text: MRSN (WRAIR)

text: USA: Bethesda

text: Homo sapiens

text: Unknown

text: Sterile Body Site

text: 38.984722 N 77.113056 W

text: Klebsiella pneumoniae

text: MRSN 31332


MRSN 31333

text: Walter Reed Army Institute of Research

characteristic: INSDC last update

text: live

text: Pathogen.cl

text: MRSN (WRAIR)

text: USA: Bethesda

text: Homo sapiens

text: Unknown

text: male

text: urine

text: 38.984722 N 77.113056 W

text: Klebsiella pneumoniae

text: MRSN 31333


MRSN 363431

text: Walter Reed Army Institute of Research

text: live

text: Pathogen.cl

text: MRSN (WRAIR)

text: Germany: Landstuhl

text: Homo sapiens

text: Unknown

text: male

text: blood

text: 49.412222 N 7.572222 E

text: Klebsiella pneumoniae

text: MRSN 363431


MRSN 567231

text: Walter Reed Army Institute of Research

text: live

text: Pathogen.cl

text: MRSN (WRAIR)

text: Ukraine: Vinnytsia

text: Homo sapiens

text: Unknown

text: wound

text: 49.233333 N 28.483333 E

text: Klebsiella pneumoniae

text: MRSN 567231


MRSN 740795

text: Walter Reed Army Institute of Research

text: live

text: Pathogen.cl

text: MRSN (WRAIR)

text: Ukraine: Vinnytsia

text: Homo sapiens

text: Unknown

text: respiratory

text: 49.233333 N 28.483333 E

text: Klebsiella pneumoniae

text: MRSN 740795


MRSN 8909

text: Walter Reed Army Institute of Research

text: live

text: Pathogen.cl

text: MRSN (WRAIR)

text: USA: Bethesda

text: Homo sapiens

text: Unknown

text: female

text: respiratory

text: 38.984722 N 77.113056 W

text: Klebsiella pneumoniae

text: MRSN 8909


text: Wisconsin State Laboratory of Hygiene

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin

text: Homo sapiens

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Brown County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Sauk County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Walworth County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Green County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Iowa County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Sheboygan County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Dane County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Waukesha County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Rock County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Vernon County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Wood County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, La Crosse County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Taylor County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Winnebago County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Dodge County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Fond Du Lac County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Columbia County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Juneau County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Racine County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Kenosha County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Brown County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Jackson County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Milwaukee County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Manitowoc County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Dane County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

characteristic: serovar

text: Escherichia coli serovar Escherichia coli 1646767


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

characteristic: host

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1647625


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Shigella flexneri

text: None detected

text: Shigella flexneri

text: Shigella flexneri serovar Shigella flexneri 1647583


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Shigella sonnei

text: None detected

text: Shigella sonnei

text: Shigella sonnei serovar Shigella sonnei 1647613


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1647606


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1646758


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1646768


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1646808


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1646750


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1646795


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Shigella flexneri

text: None detected

text: Shigella flexneri

text: Shigella flexneri serovar Shigella flexneri 1647599


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Shigella sonnei

text: None detected

text: Shigella sonnei

text: Shigella sonnei serovar Shigella sonnei 1647611


text: Petersburg Nuclear Physics Institute named by B.P.Konstantinov of NRC 'Kurchatov Institute'

text: live

text: Metagenome or environmental

text: Russia:Gatchina

text: xanthan solution

text: 59.95 N 30.20 E

text: metagenome

text: Metagenome or environmental sample from metagenome


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1646798


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1646751


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1647592


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1646787


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1646773


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1646784


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1646781


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Shigella flexneri

text: None detected

text: Shigella flexneri

text: Shigella flexneri serovar Shigella flexneri 1646759


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1646779


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1646813


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1646761


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1646805


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1647607


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Shigella flexneri

text: None detected

text: Shigella flexneri

text: Shigella flexneri serovar Shigella flexneri 1647586


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Novel

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1647630


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Shigella flexneri

text: None detected

text: Shigella flexneri

text: Shigella flexneri serovar Shigella flexneri 1647574


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1646799


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1646818


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1647593


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1646763


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1646789


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1646782


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1647563


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1647600


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Shigella sonnei

text: None detected

text: Shigella sonnei

text: Shigella sonnei serovar Shigella sonnei 1647565


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1646770


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Brown County

text: Homo sapiens

characteristic: isolate

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Calumet County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Sauk County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Jefferson County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, La Crosse County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Racine County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Rock County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Milwaukee County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Kenosha County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Saint Croix County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Columbia County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Dodge County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Fond Du Lac County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Dane County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: UC Berkeley

text: live

text: Human

text: not applicable

characteristic: age

text: Dirk Hockemeyer

text: 50% GM12878 50% Mouse Replicate 1

text: Homo sapiens

text: not applicable

characteristic: sex

text: not applicable

characteristic: tissue

text: Sample HM1


text: UC Berkeley

text: live

characteristic: INSDC status

text: Human

text: not applicable

text: Dirk Hockemeyer

text: 50% GM12878 50% Mouse Replicate 2

text: Homo sapiens

text: not applicable

text: not applicable

text: Sample HM2


text: UC Berkeley

text: live

text: Human

text: not applicable

text: Dirk Hockemeyer

text: 50% GM12878 50% Mouse Replicate 3

text: Homo sapiens

text: not applicable

text: not applicable

text: Sample HM3

characteristic: title


text: UC Berkeley

text: live

text: Human

characteristic: NCBI submission model

text: not applicable

text: Dirk Hockemeyer

text: 50% GM12878 50% HCC1187 Replicate 1

text: Homo sapiens

text: not applicable

text: not applicable

text: Mixture - I


text: UC Berkeley

text: live

text: Human

characteristic: NCBI submission package

text: not applicable

text: Dirk Hockemeyer

text: 50% GM12878 50% HCC1187 Replicate 2

text: Homo sapiens

text: not applicable

text: not applicable

text: Mixture - II


characteristic: External Id

text: UC Berkeley

text: live

text: Human

text: not applicable

text: Dirk Hockemeyer

text: 67% GM12878 33% HCC1187 Replicate 1

text: Homo sapiens

text: not applicable

text: not applicable

text: Mixture - III


text: UC Berkeley

characteristic: INSDC center name

text: live

text: Human

text: not applicable

text: Dirk Hockemeyer

text: 67% GM12878 33% HCC1187 Replicate 2

text: Homo sapiens

text: not applicable

text: not applicable

text: Mixture - IV


text: UC Berkeley

text: live

text: Human

text: not applicable

text: Dirk Hockemeyer

text: 80% GM12878 20% HCC1187 Replicate 1

text: Homo sapiens

characteristic: organism

text: not applicable

text: not applicable

text: Mixture - V


text: UC Berkeley

characteristic: INSDC first public

text: live

text: Human

text: not applicable

text: Dirk Hockemeyer

text: 80% GM12878 20% HCC1187 Replicate 2

text: Homo sapiens

text: not applicable

text: not applicable

text: Mixture - VI


text: UC Berkeley

characteristic: INSDC last update

text: live

text: Human

text: not applicable

text: Dirk Hockemeyer

text: 100% HCC1187

text: Homo sapiens

text: not applicable

text: not applicable


text: Public Health England

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: environmental

text: Missing

text: Listeria monocytogenes

text: None detected

text: Serotype 1/2b

characteristic: strain

text: Listeria monocytogenes serovar Serotype 1/2b 1647610


text: Public Health England

text: live

text: Pathogen.env

characteristic: SRA accession

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: environmental

text: Missing

text: Listeria monocytogenes

text: Burkholderia cenocepacia J2315 uid57953

text: Serotype 1/2a

characteristic: serovar

text: Listeria monocytogenes serovar Serotype 1/2a 1640877


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

characteristic: host

text: Not available

text: environmental

text: Missing

text: Listeria monocytogenes

text: None detected

text: Serotype 1/2a

text: Listeria monocytogenes serovar Serotype 1/2a 1647618


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: food

text: Missing

text: Listeria monocytogenes

text: None detected

text: Serotype 4

text: Listeria monocytogenes serovar Serotype 4 1647609


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: environmental

text: Missing

text: Listeria monocytogenes

text: None detected

text: Serotype 1/2a

text: Listeria monocytogenes serovar Serotype 1/2a 1647572


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Listeria monocytogenes

text: Streptococcus anginosus SK52 = DSM 20563

text: Serotype 4b

text: Listeria monocytogenes serovar Serotype 4b 1640871


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Listeria monocytogenes

text: None detected

text: Serotype 1/2a

text: Listeria monocytogenes serovar Serotype 1/2a 1647627


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: food

text: Missing

text: Listeria monocytogenes

text: None detected

text: Serotype 1/2a

text: Listeria monocytogenes serovar Serotype 1/2a 1647642


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Listeria monocytogenes

text: Escherichia coli K 12 substr W3110 uid161931

text: Serotype 4

text: Listeria monocytogenes serovar Serotype 4 1640870


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: food

text: Missing

text: Listeria seeligeri

text: None detected

text: Novel

text: Listeria seeligeri serovar NA 1646642


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: environmental

text: Missing

text: Listeria monocytogenes

text: None detected

text: Serotype 1/2a

text: Listeria monocytogenes serovar Serotype 1/2a 1647584


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: food

text: Missing

text: Listeria seeligeri

text: None detected

text: Novel

text: Listeria seeligeri serovar NA 1646640


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: environmental

text: Missing

text: Listeria monocytogenes

text: Burkholderia cenocepacia AU 1054 uid58371

text: Serotype 1/2a

text: Listeria monocytogenes serovar Serotype 1/2a 1640878


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Listeria monocytogenes

text: None detected

text: Serotype 4

text: Listeria monocytogenes serovar Serotype 4 1647602


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Buffalo County

text: Homo sapiens

characteristic: isolate

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Trempealeau County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Pierce County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Eau Claire County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Washburn County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Brown County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Door County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Florence County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Chippewa County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Wood County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Columbia County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Richland County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Rock County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Milwaukee County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Ozaukee County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Sheboygan County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Dunn County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Buffalo County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Trempealeau County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Kewaunee County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Eau Claire County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Saint Croix County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Dodge County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Pepin County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Price County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Grant County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Waukesha County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: environmental

text: Missing

text: Listeria monocytogenes

text: Staphylococcus aureus M013 uid88065

text: Serotype 1/2a

text: Listeria monocytogenes serovar Serotype 1/2a 1640889


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Not available

text: food

text: Missing

text: Listeria monocytogenes

text: None detected

text: Serotype 1/2a

text: Listeria monocytogenes serovar Serotype 1/2a 1647622


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Missing

text: Listeria monocytogenes

text: Listeria monocytogenes Clip80459 uid59317

text: Serotype 4b

text: Listeria monocytogenes serovar Serotype 4b 1647624


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Columbia County

text: Homo sapiens

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Wood County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Washington County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Brown County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Manitowoc County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Walworth County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Dane County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Sauk County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Dodge County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Fond Du Lac County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Richland County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Milwaukee County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Ozaukee County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Sheboygan County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Waukesha County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Racine County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Jefferson County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Kenosha County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Pepin County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Outagamie County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: CDC GCWGS

text: live

text: Pathogen.cl

text: CDC

text: Homo sapiens

text: gonorrhea

text: male

text: Urethral

text: pathogen.cl

text: missing

text: Neisseria gonorrhoeae

text: GCWGS


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Wood County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Clark County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Marathon County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Columbia County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Waupaca County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Marquette County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Lincoln County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Portage County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Taylor County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Milwaukee County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Dane County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Richland County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Kenosha County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Racine County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Door County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Kewaunee County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Polk County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Grant County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Ozaukee County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Eau Claire County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Waukesha County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Trempealeau County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Dunn County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Wisconsin State Laboratory of Hygiene

text: live

text: SARS-CoV-2: clinical or host-associated

text: Wisconsin State Laboratory of Hygiene

text: USA: Wisconsin, Chippewa County

text: Homo sapiens

text: clinical

text: Surveillance

text: Baseline surveillance (random sampling)

text: RNA Re-Extraction (Post RT-PCR)


text: Tulane University

text: live

text: Model organism or animal

text: Adult

characteristic: age

text: Karubian Lab, Tulane University

text: Erik D. Enbody

text: lorentzi

characteristic: ecotype

text: 7.6017 S 141.30902 E

text: Malurus alboscapulatus

text: female

characteristic: sex

text: Feather


text: Tulane University

text: live

characteristic: INSDC status

text: Model organism or animal

text: Adult

text: Karubian Lab, Tulane University

text: Erik D. Enbody

text: moretoni

text: 10.2216 S 150.4805 E

text: Malurus alboscapulatus

text: male

text: Feather

characteristic: tissue

characteristic: title


Total Silk Glands IsoSeq

characteristic: External Id

text: American Museum of Natural History

text: live

text: Invertebrate

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: breed

text: Mature

text: USA: Riverside, California

text: Uloborus diversus

text: female

text: Total Silk Gland

text: Invertebrate sample from Uloborus diversus


text: Centre for Brain Research

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Parkinson's disease

characteristic: disease state

text: Homo sapiens

characteristic: organism

text: Substantia nigra pars compacta

text: Substantia nigra pars compacta

text: Human SNpc, Parkinson's disease, patient [HsRNAPD5SNc_R1.AT.fastq.gz]


text: Centre for Brain Research

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: Parkinson's disease

text: Homo sapiens

text: Substantia nigra pars compacta

text: Substantia nigra pars compacta

text: Human SNpc, Parkinson's disease, patient [HsRNAPD4SNc_R1.AT.fastq.gz]


text: Centre for Brain Research

text: live

text: Generic

text: Parkinson's disease

text: Homo sapiens

text: Substantia nigra pars compacta

text: Substantia nigra pars compacta

text: Human SNpc, Parkinson's disease, patient [HsRNAPD2SNc_R1.AT.fastq.gz]


text: Centre for Brain Research

text: live

text: Generic

text: Parkinson's disease

text: Homo sapiens

text: Substantia nigra pars compacta

text: Substantia nigra pars compacta

text: Human SNpc, Parkinson's disease, patient [HsRNAPD1SNc_R1.AT.fastq.gz]


text: Centre for Brain Research

text: live

text: Generic

text: Control

text: Homo sapiens

text: Substantia nigra pars compacta

text: Substantia nigra pars compacta

text: Human SNpc, Parkinson's disease, control [HsRNAC4SNc_R1.AT.fastq.gz]


text: Centre for Brain Research

text: live

text: Generic

text: Control

text: Homo sapiens

text: Substantia nigra pars compacta

text: Substantia nigra pars compacta

text: Human SNpc, Parkinson's disease, control [HsRNAC2SNc_R1.AT.fastq.gz]


text: Centre for Brain Research

text: live

text: Generic

text: Control

text: Homo sapiens

text: Substantia nigra pars compacta

text: Substantia nigra pars compacta

text: Human SNpc, Parkinson's disease, control [HsRNAC1SNc_R1.AT.fastq.gz]


text: Centre for Brain Research

text: live

text: Generic

text: Mus musculus

text: Substantia nigra pars compacta

characteristic: strain

text: 24 h

characteristic: time

text: Substantia nigra pars compacta

text: MPTP mouse SNpc, 24 h treatment, treated [SO_5406_Repl_Set5_24M4_SNc_Nov]

text: MPTP

characteristic: treatment


text: Centre for Brain Research

text: live

characteristic: INSDC status

text: Generic

text: Mus musculus

text: Substantia nigra pars compacta

text: 24 h

text: Substantia nigra pars compacta

text: MPTP mouse SNpc, 24 h treatment, treated [SO_5406_Set5_24M15NcNov]

text: MPTP


text: Centre for Brain Research

text: live

text: Generic

text: Mus musculus

text: Substantia nigra pars compacta

text: 24 h

text: Substantia nigra pars compacta

characteristic: tissue

text: MPTP mouse SNpc, 24 h treatment, treated [SO_5062_Set2_24M3_SNC]

text: MPTP


text: Centre for Brain Research

text: live

text: Generic

text: Mus musculus

text: Substantia nigra pars compacta

text: 24 h

text: Substantia nigra pars compacta

text: MPTP mouse SNpc, 24 h treatment, treated [SO_5062_Set2_24M2_SNC]

characteristic: title

text: MPTP


characteristic: External Id

text: Centre for Brain Research

text: live

text: Generic

text: Mus musculus

text: Substantia nigra pars compacta

text: 24 h

text: Substantia nigra pars compacta

text: MPTP mouse SNpc, 24 h treatment, treated [SO_5062_Set2_24M1_SNC]

text: MPTP


text: Centre for Brain Research

text: live

text: Generic

characteristic: NCBI submission model

text: Mus musculus

text: Substantia nigra pars compacta

text: 24 h

text: Substantia nigra pars compacta

text: MPTP mouse SNpc, 24 h treatment, control [SO_5406_Set5_24C3SNcNov]

text: control (saline)


text: Centre for Brain Research

text: live

text: Generic

characteristic: NCBI submission package

text: Mus musculus

text: Substantia nigra pars compacta

text: 24 h

text: Substantia nigra pars compacta

text: MPTP mouse SNpc, 24 h treatment, control [SO_5406_Set5_24C2SNcNov]

text: control (saline)


text: Centre for Brain Research

text: live

text: Generic

text: Mus musculus

text: Substantia nigra pars compacta

text: 24 h

text: Substantia nigra pars compacta

text: MPTP mouse SNpc, 24 h treatment, control [SO_5062_Set2_24C3_SNC]

text: control (saline)


text: Centre for Brain Research

text: live

text: Generic

text: Mus musculus

text: Substantia nigra pars compacta

text: 24 h

text: Substantia nigra pars compacta

text: MPTP mouse SNpc, 24 h treatment, control [SO_5062_Set2_24C2_SNC]

text: control (saline)


text: Centre for Brain Research

text: live

text: Generic

text: Mus musculus

text: Substantia nigra pars compacta

text: 24 h

text: Substantia nigra pars compacta

text: MPTP mouse SNpc, 24 h treatment, control [SO_5062_Set2_24C1_SNC]

text: control (saline)


text: Centre for Brain Research

text: live

text: Generic

text: Mus musculus

text: Substantia nigra pars compacta

text: 14 days

text: Substantia nigra pars compacta

text: MPTP mouse SNpc, 14 days treatment, treated [SO-4248-T3]

text: MPTP


text: Centre for Brain Research

text: live

text: Generic

text: Mus musculus

text: Substantia nigra pars compacta

text: 14 days

text: Substantia nigra pars compacta

text: MPTP mouse SNpc, 14 days treatment, treated [SO-4248-T2]

text: MPTP


text: Centre for Brain Research

text: live

text: Generic

text: Mus musculus

text: Substantia nigra pars compacta

text: 14 days

text: Substantia nigra pars compacta

text: MPTP mouse SNpc, 14 days treatment, treated [SO-4248-T1]

text: MPTP


text: Centre for Brain Research

text: live

text: Generic

text: Mus musculus

text: Substantia nigra pars compacta

text: 14 days

text: Substantia nigra pars compacta

text: MPTP mouse SNpc, 14 days treatment, control [SO-4248-C3]

text: control (saline)


text: Centre for Brain Research

text: live

text: Generic

text: Mus musculus

text: Substantia nigra pars compacta

text: 14 days

text: Substantia nigra pars compacta

text: MPTP mouse SNpc, 14 days treatment, control [SO-4248-C2]

text: control (saline)


text: Centre for Brain Research

text: live

text: Generic

text: Mus musculus

text: Substantia nigra pars compacta

text: 14 days

text: Substantia nigra pars compacta

text: MPTP mouse SNpc, 14 days treatment, control [SO-4248-C1]

text: control (saline)


ADI IsletCore R449

text: University of Alberta

text: live

text: Human

characteristic: age

text: ADI IsletCore

characteristic: isolate

text: Homo sapiens

text: female

characteristic: sex

text: pancreatic islets of Langerhans

text: Human sample from Homo sapiens


text: Intermountain Healthcare

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: IDEL

text: USA: Utah

text: Homo sapiens

characteristic: host

text: nasal

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: Intermountain Healthcare

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: IDEL

text: USA: Utah

text: Homo sapiens

text: nasal

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism


text: Intermountain Healthcare

text: live

text: SARS-CoV-2: clinical or host-associated

text: IDEL

text: USA: Nevada

text: Homo sapiens

text: nasal


text: University of Alberta

text: live

text: Model organism or animal

text: Limousin cross

characteristic: breed

text: Adult

text: Bos taurus

text: female

text: ovarian

text: Model organism or animal sample from Bos taurus


text: University of Alberta

text: live

characteristic: INSDC status

text: Model organism or animal

text: Limousin cross

text: Adult

text: Bos taurus

text: male

text: ear


text: University of Alberta

text: live

text: Model organism or animal

text: Belgian blue cross

text: Adult

text: Bos taurus

text: male

text: ear

characteristic: tissue


text: University of Alberta

text: live

text: Model organism or animal

text: Charolais cross

text: Adult

text: Bos taurus

text: male

text: ear

characteristic: title


characteristic: External Id

text: University of Alberta

text: live

text: Model organism or animal

text: Simmental cross

text: Adult

text: Bos taurus

text: male

text: ear


text: University of Alberta

text: live

text: Model organism or animal

characteristic: NCBI submission model

text: Angus

text: Adult

text: Bos taurus

text: male

text: ear


text: University of Alberta

text: live

text: Model organism or animal

characteristic: NCBI submission package

text: Charolais

text: Adult

text: Bos taurus

text: male

text: ear


MnCd

text: Universidade Federal do Rio de Janeiro

text: live

text: Pathogen.cl

text: Ribotype 106, Sequence type 42

characteristic: Subsource note

text: Universidade Federal do Rio de Janeiro, Kelly Rainha

text: Brazil: Rio de Janeiro

text: Canis lupus familiaris

text: 11 months

text: not applicable

text: female

text: diarrheal stool

text: not collected

text: Clostridioides difficile

text: MnCd

characteristic: strain

text: Pathogen: clinical or host-associated sample from Clostridioides difficile