text: SARS-CoV-2/Human/USA/CO-CDC-MMB12387901/2021

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

characteristic: collected by

characteristic: collection date

text: Nasal Swab

characteristic: collection method

text: Nasal Swab

text: N gene

text: S gene

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Colorado

characteristic: geo loc name

text: Homo sapiens

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text: W

text: female

text: nasal swab

characteristic: isolation source

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text: baseline surveillance (random sampling)


status: PUBLIC

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text: SARS-CoV-2/Human/USA/CO-CDC-MMB12387765/2021

text: CDC-OAMD

characteristic: INSDC center name

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text: live

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text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Mako Medical

tag: attribute

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Colorado

text: Homo sapiens

characteristic: host

characteristic: host disease

text: O

characteristic: host race

text: female

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characteristic: isolate

text: nasal swab

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: baseline surveillance (random sampling)

text: CDC Sars CoV2 Sequencing Baseline Constellation

characteristic: title


text: SARS-CoV-2/Human/USA/CO-CDC-MMB12387394/2021

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

characteristic: collected by

characteristic: collection date

text: Nasal Swab

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text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Colorado

characteristic: geo loc name

text: Homo sapiens

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text: W

text: male

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text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CO-CDC-MMB12387250/2021

characteristic: External Id

text: CDC-OAMD

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text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

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text: Mako Medical

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text: N gene

text: S gene

text: TaqPath

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text: TaqPath

text: TaqPath

text: USA: Colorado

text: Homo sapiens

text: W

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CO-CDC-MMB12387167/2021

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

characteristic: SRA accession

text: Mako Medical

text: Nasal Swab

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text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Colorado

text: Homo sapiens

characteristic: host

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text: W

characteristic: host race

text: male

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characteristic: isolate

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CO-CDC-MMB12386937/2021

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

characteristic: collected by

characteristic: collection date

text: Nasal Swab

characteristic: collection method

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Colorado

characteristic: geo loc name

text: Homo sapiens

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text: A

text: female

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text: baseline surveillance (random sampling)

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characteristic: External Id

text: SARS-CoV-2/Human/USA/CO-CDC-MMB12385669/2021

text: CDC-OAMD

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characteristic: INSDC last update

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text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Colorado

text: Homo sapiens

text: W

text: male

text: nasal swab

characteristic: isolation source

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text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CO-CDC-MMB12382875/2021

text: CDC-OAMD

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Colorado

text: Homo sapiens

characteristic: host

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text: W

characteristic: host race

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CO-CDC-MMB12382454/2021

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

characteristic: collected by

characteristic: collection date

text: Nasal Swab

characteristic: collection method

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Colorado

characteristic: geo loc name

text: Homo sapiens

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text: W

text: male

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characteristic: isolate

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CO-CDC-MMB12381827/2021

characteristic: External Id

text: CDC-OAMD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Colorado

text: Homo sapiens

text: W

text: female

text: nasal swab

characteristic: organism

text: baseline surveillance (random sampling)

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text: SARS-CoV-2/Human/USA/CO-CDC-MMB12381726/2021

text: CDC-OAMD

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Colorado

text: Homo sapiens

characteristic: host

text: W

text: female

text: nasal swab

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CO-CDC-MMB12381703/2021

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

characteristic: collected by

characteristic: collection date

text: Nasal Swab

characteristic: collection method

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Colorado

characteristic: geo loc name

text: Homo sapiens

characteristic: host age

characteristic: host disease

text: W

characteristic: host race

text: male

text: nasal swab

text: baseline surveillance (random sampling)


characteristic: External Id

text: SARS-CoV-2/Human/USA/CO-CDC-MMB12381546/2021

text: CDC-OAMD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Colorado

text: Homo sapiens

text: W

text: female

characteristic: host sex

characteristic: isolate

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CO-CDC-MMB12381289/2021

text: CDC-OAMD

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Colorado

text: Homo sapiens

characteristic: host

text: W

text: male

text: nasal swab

characteristic: organism

text: baseline surveillance (random sampling)

characteristic: title


text: SARS-CoV-2/Human/USA/CO-CDC-MMB12380381/2021

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

characteristic: collected by

characteristic: collection date

text: Nasal Swab

characteristic: collection method

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Colorado

characteristic: geo loc name

text: Homo sapiens

characteristic: host age

text: W

text: male

text: nasal swab

characteristic: isolation source

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text: baseline surveillance (random sampling)


characteristic: External Id

text: SARS-CoV-2/Human/USA/CO-CDC-MMB12379988/2021

text: CDC-OAMD

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characteristic: INSDC first public

characteristic: INSDC last update

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text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Colorado

text: Homo sapiens

characteristic: host disease

text: O

characteristic: host race

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CO-CDC-MMB12379816/2021

text: CDC-OAMD

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Colorado

text: Homo sapiens

characteristic: host

text: W

text: female

characteristic: host sex

characteristic: isolate

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-MMB12427466/2021

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

characteristic: collected by

characteristic: collection date

text: Nasal Swab

characteristic: collection method

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: California

characteristic: geo loc name

text: Homo sapiens

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text: A

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text: nasal swab

text: Severe acute respiratory syndrome coronavirus 2

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text: baseline surveillance (random sampling)

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text: SARS-CoV-2/Human/USA/CA-CDC-MMB12426781/2021

characteristic: External Id

text: CDC-OAMD

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characteristic: INSDC last update

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text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: California

text: Homo sapiens

text: O

text: female

text: nasal swab

characteristic: isolation source

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text: baseline surveillance (random sampling)

text: CDC Sars CoV2 Sequencing Baseline Constellation


text: SARS-CoV-2/Human/USA/CA-CDC-MMB12425677/2021

text: CDC-OAMD

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

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characteristic: SRA accession

text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: California

text: Homo sapiens

characteristic: host

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text: W

characteristic: host race

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-MMB12422161/2021

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

characteristic: collected by

characteristic: collection date

text: Nasal Swab

characteristic: collection method

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: California

characteristic: geo loc name

text: Homo sapiens

characteristic: host age

text: W

text: female

characteristic: host sex

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text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-MMB12420660/2021

characteristic: External Id

text: CDC-OAMD

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characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: California

text: Homo sapiens

text: W

text: male

text: nasal swab

characteristic: organism

text: baseline surveillance (random sampling)

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text: SARS-CoV-2/Human/USA/CA-CDC-MMB12418970/2021

text: CDC-OAMD

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characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

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characteristic: SRA accession

text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: California

text: Homo sapiens

characteristic: host

text: W

text: female

text: nasal swab

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/AZ-CDC-MMB12419636/2021

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

characteristic: collected by

characteristic: collection date

text: Nasal Swab

characteristic: collection method

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Arizona

characteristic: geo loc name

text: Homo sapiens

characteristic: host age

characteristic: host disease

text: W

characteristic: host race

text: male

text: nasal swab

text: baseline surveillance (random sampling)


characteristic: External Id

text: clinical/research

characteristic: IFSAC+ Category

text: CFSAN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: ProjectAccession

characteristic: PublicAccession

text: clinical/host-associated

text: CDC

text: Salmonella

characteristic: genus

text: USA:OR

text: OR___20072006920; CFSAN110833

characteristic: ontological term

text: Salmonella enterica

text: GenomeTrakr

characteristic: project name

text: FDA Center for Food Safety and Applied Nutrition

characteristic: sequenced by

text: human

characteristic: source type

text: enterica

characteristic: species

text: Homo sapiens

characteristic: specific host

characteristic: strain

text: Pathogen: clinical or host-associated sample from Salmonella enterica


text: clinical/research

text: CFSAN

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: clinical/host-associated

text: CDC

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text: Salmonella

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characteristic: geo loc name

text: TN___N20E238596-01; CFSAN110838

text: Salmonella enterica

characteristic: organism

text: GenomeTrakr

text: human

text: enterica

text: Homo sapiens

characteristic: title


characteristic: External Id

text: clinical/research

characteristic: IFSAC+ Category

text: CFSAN

characteristic: INSDC center name

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characteristic: INSDC last update

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text: live

text: Pathogen.cl

characteristic: ProjectAccession

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text: clinical/host-associated

text: CDC

text: Salmonella

characteristic: genus

text: USA

text: Salmonella enterica

text: GenomeTrakr

text: human

text: enterica

text: Homo sapiens


text: clinical/research

text: CFSAN

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

text: clinical/host-associated

text: CDC

text: Salmonella

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text: TN___N20E287171-01; CFSAN110902

characteristic: ontological term

text: Salmonella enterica

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: human

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text: enterica

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text: Homo sapiens

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characteristic: External Id

text: clinical/research

characteristic: IFSAC+ Category

text: CFSAN

text: live

text: Pathogen.cl

characteristic: NCBI submission package

characteristic: SRA accession

text: clinical/host-associated

text: CDC

characteristic: collected by

characteristic: collection date

text: Salmonella

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characteristic: geo loc name

text: MS___20MS00303_; CFSAN110835

text: Salmonella enterica

characteristic: organism

text: GenomeTrakr

text: human

text: enterica

text: Homo sapiens

characteristic: title


text: clinical/research

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characteristic: INSDC center name

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text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: ProjectAccession

characteristic: PublicAccession

text: clinical/host-associated

text: CDC

text: Salmonella

characteristic: genus

text: USA:MI

text: MI___CL20-165200; CFSAN110836

text: Salmonella enterica

text: GenomeTrakr

text: human

text: enterica

text: Homo sapiens


characteristic: External Id

text: clinical/research

characteristic: IFSAC+ Category

text: CFSAN

text: live

text: Pathogen.cl

text: clinical/host-associated

text: CDC

text: Salmonella

text: USA:GA

characteristic: ontological term

text: Salmonella enterica

text: GenomeTrakr

characteristic: project name

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text: human

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text: enterica

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text: Homo sapiens

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text: clinical/research

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characteristic: INSDC center name

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text: live

text: Pathogen.cl

characteristic: NCBI submission package

characteristic: SRA accession

text: clinical/host-associated

text: CDC

characteristic: collected by

characteristic: collection date

text: Salmonella

text: USA:PA

characteristic: geo loc name

text: PA___M20051865-1; CFSAN110837

text: Salmonella enterica

characteristic: organism

text: GenomeTrakr

text: human

text: enterica

text: Homo sapiens

characteristic: title


characteristic: External Id

text: Contamination Source Identification

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

text: USA:Pittsburgh Pennsylvania

text: Day 30

characteristic: institutiontimepoint

text: Hospital surface swab

text: 40.4468 N 79.9642 W

text: hospital metagenome

text: aerobe

text: surface swab

text: RNA extraction

text: Keyboard

characteristic: surfaceidentifier

text: Post AIONX cleanSURFACES

characteristic: time

text: AIONX, Day 30

characteristic: timepoint

text: Metagenome or environmental sample from hospital metagenome


text: Contamination Source Identification

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: USA:Pittsburgh Pennsylvania

text: Day 30

text: Hospital surface swab

text: 40.4468 N 79.9642 W

text: hospital metagenome

text: aerobe

text: surface swab

text: RNA extraction

text: Ledge

text: Post AIONX cleanSURFACES

text: AIONX, Day 30


text: Contamination Source Identification

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

characteristic: SRA accession

text: USA:Pittsburgh Pennsylvania

text: Day 30

text: Hospital surface swab

text: 40.4468 N 79.9642 W

text: hospital metagenome

text: aerobe

text: surface swab

text: RNA extraction

text: Med Cart

text: Post AIONX cleanSURFACES

text: AIONX, Day 30


text: Contamination Source Identification

text: live

text: Metagenome or environmental

text: USA:Pittsburgh Pennsylvania

text: Day 30

text: Hospital surface swab

text: 40.4468 N 79.9642 W

text: hospital metagenome

text: aerobe

text: surface swab

text: RNA extraction

text: Work Surface

text: Post AIONX cleanSURFACES

text: AIONX, Day 30


text: Contamination Source Identification

text: live

text: Metagenome or environmental

text: USA:Pittsburgh Pennsylvania

text: Day 30

text: Hospital surface swab

text: 40.4468 N 79.9642 W

text: hospital metagenome

text: aerobe

text: surface swab

text: RNA extraction

text: Wow

text: Post AIONX cleanSURFACES

text: AIONX, Day 30


text: Contamination Source Identification

text: live

text: Metagenome or environmental

text: USA:Pittsburgh Pennsylvania

text: Day 30

text: Hospital surface swab

text: 40.4468 N 79.9642 W

text: hospital metagenome

text: aerobe

text: surface swab

text: RNA extraction

text: Wow

text: Post AIONX cleanSURFACES

text: AIONX, Day 30


text: Contamination Source Identification

text: live

text: Metagenome or environmental

text: USA:Pittsburgh Pennsylvania

text: Day 14

text: Hospital surface swab

text: 40.4468 N 79.9642 W

text: hospital metagenome

text: aerobe

text: surface swab

text: RNA extraction

text: Keyboard

text: Post AIONX cleanSURFACES

text: AIONX, Day 14


text: Contamination Source Identification

text: live

text: Metagenome or environmental

text: USA:Pittsburgh Pennsylvania

text: Day 14

text: Hospital surface swab

text: 40.4468 N 79.9642 W

text: hospital metagenome

text: aerobe

text: surface swab

text: RNA extraction

text: Ledge

text: Post AIONX cleanSURFACES

text: AIONX, Day 14


text: Contamination Source Identification

text: live

text: Metagenome or environmental

text: USA:Pittsburgh Pennsylvania

text: Day 14

text: Hospital surface swab

text: 40.4468 N 79.9642 W

text: hospital metagenome

text: aerobe

text: surface swab

text: RNA extraction

text: Med Cart

text: Post AIONX cleanSURFACES

text: AIONX, Day 14


text: Contamination Source Identification

text: live

text: Metagenome or environmental

text: USA:Pittsburgh Pennsylvania

text: Day 14

text: Hospital surface swab

text: 40.4468 N 79.9642 W

text: hospital metagenome

text: aerobe

text: surface swab

text: RNA extraction

text: Work Surface

text: Post AIONX cleanSURFACES

text: AIONX, Day 14


text: Contamination Source Identification

text: live

text: Metagenome or environmental

text: USA:Pittsburgh Pennsylvania

text: Day 14

text: Hospital surface swab

text: 40.4468 N 79.9642 W

text: hospital metagenome

text: aerobe

text: surface swab

text: RNA extraction

text: Wow

text: Post AIONX cleanSURFACES

text: AIONX, Day 14


text: Contamination Source Identification

text: live

text: Metagenome or environmental

text: USA:Pittsburgh Pennsylvania

text: Day 7

text: Hospital surface swab

text: 40.4468 N 79.9642 W

text: hospital metagenome

text: aerobe

text: surface swab

text: RNA extraction

text: Keyboard

text: Post AIONX cleanSURFACES

text: AIONX, Day 7


text: Contamination Source Identification

text: live

text: Metagenome or environmental

text: USA:Pittsburgh Pennsylvania

text: Day 7

text: Hospital surface swab

text: 40.4468 N 79.9642 W

text: hospital metagenome

text: aerobe

text: surface swab

text: RNA extraction

text: Ledge

text: Post AIONX cleanSURFACES

text: AIONX, Day 7


text: Contamination Source Identification

text: live

text: Metagenome or environmental

text: USA:Pittsburgh Pennsylvania

text: Day 7

text: Hospital surface swab

text: 40.4468 N 79.9642 W

text: hospital metagenome

text: aerobe

text: surface swab

text: RNA extraction

text: Med Cart

text: Post AIONX cleanSURFACES

text: AIONX, Day 7


text: Contamination Source Identification

text: live

text: Metagenome or environmental

text: USA:Pittsburgh Pennsylvania

text: Day 7

text: Hospital surface swab

text: 40.4468 N 79.9642 W

text: hospital metagenome

text: aerobe

text: surface swab

text: RNA extraction

text: Work Surface

text: Post AIONX cleanSURFACES

text: AIONX, Day 7


text: Contamination Source Identification

text: live

text: Metagenome or environmental

text: USA:Pittsburgh Pennsylvania

text: Day 7

text: Hospital surface swab

text: 40.4468 N 79.9642 W

text: hospital metagenome

text: aerobe

text: surface swab

text: RNA extraction

text: Wow

text: Post AIONX cleanSURFACES

text: AIONX, Day 7


text: Contamination Source Identification

text: live

text: Metagenome or environmental

text: USA:Pittsburgh Pennsylvania

text: Day 1

text: Hospital surface swab

text: 40.4468 N 79.9642 W

text: hospital metagenome

text: aerobe

text: surface swab

text: RNA extraction

text: Keyboard

text: Post AIONX cleanSURFACES

text: AIONX, Day 1


text: Contamination Source Identification

text: live

text: Metagenome or environmental

text: USA:Pittsburgh Pennsylvania

text: Day 1

text: Hospital surface swab

text: 40.4468 N 79.9642 W

text: hospital metagenome

text: aerobe

text: surface swab

text: RNA extraction

text: Ledge

text: Post AIONX cleanSURFACES

text: AIONX, Day 1


text: Contamination Source Identification

text: live

text: Metagenome or environmental

text: USA:Pittsburgh Pennsylvania

text: Day 1

text: Hospital surface swab

text: 40.4468 N 79.9642 W

text: hospital metagenome

text: aerobe

text: surface swab

text: RNA extraction

text: Med Cart

text: Post AIONX cleanSURFACES

text: AIONX, Day 1


text: Contamination Source Identification

text: live

text: Metagenome or environmental

text: USA:Pittsburgh Pennsylvania

text: Day 1

text: Hospital surface swab

text: 40.4468 N 79.9642 W

text: hospital metagenome

text: aerobe

text: surface swab

text: RNA extraction

text: Work Surface

text: Post AIONX cleanSURFACES

text: AIONX, Day 1


text: Contamination Source Identification

text: live

text: Metagenome or environmental

text: USA:Pittsburgh Pennsylvania

text: Day 1

text: Hospital surface swab

text: 40.4468 N 79.9642 W

text: hospital metagenome

text: aerobe

text: surface swab

text: RNA extraction

text: Wow

text: Post AIONX cleanSURFACES

text: AIONX, Day 1


text: Contamination Source Identification

text: live

text: Metagenome or environmental

text: USA:Pittsburgh Pennsylvania

text: Day -1

text: Hospital surface swab

text: 40.4468 N 79.9642 W

text: hospital metagenome

text: aerobe

text: surface swab

text: RNA extraction

text: Keyboard

text: Pre AIONX cleanSURFACES

text: Baseline


text: Contamination Source Identification

text: live

text: Metagenome or environmental

text: USA:Pittsburgh Pennsylvania

text: Day -1

text: Hospital surface swab

text: 40.4468 N 79.9642 W

text: hospital metagenome

text: aerobe

text: surface swab

text: RNA extraction

text: Ledge

text: Pre AIONX cleanSURFACES

text: Baseline


text: Contamination Source Identification

text: live

text: Metagenome or environmental

text: USA:Pittsburgh Pennsylvania

text: Day -1

text: Hospital surface swab

text: 40.4468 N 79.9642 W

text: hospital metagenome

text: aerobe

text: surface swab

text: RNA extraction

text: Med Cart

text: Pre AIONX cleanSURFACES

text: Baseline


text: Contamination Source Identification

text: live

text: Metagenome or environmental

text: USA:Pittsburgh Pennsylvania

text: Day -1

text: Hospital surface swab

text: 40.4468 N 79.9642 W

text: hospital metagenome

text: aerobe

text: surface swab

text: RNA extraction

text: Work Surface

text: Pre AIONX cleanSURFACES

text: Baseline


text: Contamination Source Identification

text: live

text: Metagenome or environmental

text: USA:Pittsburgh Pennsylvania

text: Day -1

text: Hospital surface swab

text: 40.4468 N 79.9642 W

text: hospital metagenome

text: aerobe

text: surface swab

text: RNA extraction

text: Wow

text: Pre AIONX cleanSURFACES

text: Baseline


text: Vet-LIRN: Washington State University, Animal Disease Diagnostic Laboratory

text: live

text: Pathogen.env

text: Washington State University Veterinary Teaching Hospital

characteristic: collected by

characteristic: collection date

text: USA:WA

text: Mustela putorius furo

characteristic: host

text: feces

characteristic: isolation source

text: Salmonella enterica

text: Vet-LIRN

characteristic: project name

text: Washington State University Washington Animal Disease Diagnostic Laboratory

text: animal

characteristic: strain

text: Pathogen: environmental/food/other sample from Salmonella enterica


characteristic: External Id

text: Nanjing Agriculture University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

characteristic: age

text: Large White

characteristic: breed

text: Spermatophile stem cells

text: piglet

text: Sus scrofa

characteristic: organism

text: cell culture

text: male

characteristic: sex

text: testicles

characteristic: tissue

text: Model organism or animal sample from Sus scrofa

characteristic: title

characteristic: treatment


text: Nanjing Agriculture University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Large White

text: Spermatophile stem cells

text: piglet

text: Sus scrofa

text: cell culture

text: male

text: testicles

text: 0.1M Zearalenone(rep1)


text: Nanjing Agriculture University

text: live

text: Model organism or animal

text: Large White

text: Spermatophile stem cells

text: piglet

text: Sus scrofa

text: cell culture

text: male

text: testicles

text: 0.1M Zearalenone(rep2)


text: SARS-CoV-2/Human/USA/WI-CDC-MMB12537271/2021

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

characteristic: collected by

characteristic: collection date

text: Nasal Swab

characteristic: collection method

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Wisconsin

characteristic: geo loc name

text: Homo sapiens

characteristic: host

characteristic: host age

characteristic: host disease

text: W

characteristic: host race

text: male

characteristic: host sex

characteristic: isolate

text: nasal swab

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/WI-CDC-MMB12534755/2021

characteristic: External Id

text: CDC-OAMD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Wisconsin

text: Homo sapiens

text: W

text: nasal swab

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: baseline surveillance (random sampling)

characteristic: title


text: SARS-CoV-2/Human/USA/WI-CDC-MMB12532560/2021

text: CDC-OAMD

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Mako Medical

characteristic: collected by

characteristic: collection date

text: Nasal Swab

characteristic: collection method

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Wisconsin

text: Homo sapiens

text: W

text: female

text: nasal swab

text: baseline surveillance (random sampling)

text: CDC Sars CoV2 Sequencing Baseline Constellation


text: SARS-CoV-2/Human/USA/WI-CDC-MMB12530271/2021

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Wisconsin

characteristic: geo loc name

text: Homo sapiens

characteristic: host

characteristic: host age

characteristic: host disease

text: male

characteristic: host sex

characteristic: isolate

text: nasal swab

text: baseline surveillance (random sampling)


characteristic: External Id

text: SARS-CoV-2/Human/USA/WI-CDC-MMB12530270/2021

text: CDC-OAMD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Wisconsin

text: Homo sapiens

text: W

characteristic: host race

text: female

text: nasal swab

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/WI-CDC-MMB12519061/2021

text: CDC-OAMD

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Wisconsin

text: Homo sapiens

text: W

text: female

text: nasal swab

characteristic: organism

text: baseline surveillance (random sampling)

characteristic: title


text: SARS-CoV-2/Human/USA/VA-CDC-MMB12604570/2021

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

characteristic: collected by

characteristic: collection date

text: Nasal Swab

characteristic: collection method

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Virginia

characteristic: geo loc name

text: Homo sapiens

characteristic: host

characteristic: host age

characteristic: host disease

text: O

text: male

text: nasal swab

text: baseline surveillance (random sampling)


characteristic: External Id

text: SARS-CoV-2/Human/USA/VA-CDC-MMB12536808/2021

text: CDC-OAMD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Virginia

text: Homo sapiens

text: W

characteristic: host race

text: female

characteristic: host sex

characteristic: isolate

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/TX-CDC-MMB12528051/2021

text: CDC-OAMD

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Texas

text: Homo sapiens

text: W

text: female

text: nasal swab

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/TX-CDC-MMB12528023/2021

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

characteristic: collected by

characteristic: collection date

text: Nasal Swab

characteristic: collection method

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Texas

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: W

text: male

text: nasal swab

characteristic: organism

text: baseline surveillance (random sampling)

characteristic: title


characteristic: External Id

text: SARS-CoV-2/Human/USA/TN-CDC-MMB12508454/2021

text: CDC-OAMD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Tennessee

text: Homo sapiens

characteristic: host age

characteristic: host disease

text: W

characteristic: host race

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/SC-CDC-MMB12553158/2021

text: CDC-OAMD

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: South Carolina

text: Homo sapiens

text: male

characteristic: host sex

characteristic: isolate

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/SC-CDC-MMB12552787/2021

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

characteristic: collected by

characteristic: collection date

text: Nasal Swab

characteristic: collection method

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: South Carolina

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: female

text: nasal swab

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/SC-CDC-MMB12552700/2021

characteristic: External Id

text: CDC-OAMD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: South Carolina

text: Homo sapiens

characteristic: host age

text: male

text: nasal swab

characteristic: organism

text: baseline surveillance (random sampling)

characteristic: title


text: SARS-CoV-2/Human/USA/SC-CDC-MMB12541701/2021

text: CDC-OAMD

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: South Carolina

text: Homo sapiens

characteristic: host disease

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/SC-CDC-MMB12531379/2021

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

characteristic: collected by

characteristic: collection date

text: Nasal Swab

characteristic: collection method

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: South Carolina

characteristic: geo loc name

text: Homo sapiens

text: male

characteristic: host sex

characteristic: isolate

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/SC-CDC-MMB12526429/2021

characteristic: External Id

text: CDC-OAMD

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: South Carolina

text: Homo sapiens

characteristic: host

text: male

text: nasal swab

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/SC-CDC-MMB12511979/2021

text: CDC-OAMD

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: South Carolina

text: Homo sapiens

characteristic: host age

text: male

text: nasal swab

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: baseline surveillance (random sampling)

characteristic: title


text: SARS-CoV-2/Human/USA/SC-CDC-MMB12499249/2021

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Mako Medical

characteristic: collected by

characteristic: collection date

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: South Carolina

text: Homo sapiens

characteristic: host disease

text: W

characteristic: host race

text: female

text: nasal swab

text: baseline surveillance (random sampling)

text: CDC Sars CoV2 Sequencing Baseline Constellation


text: SARS-CoV-2/Human/USA/PA-CDC-MMB12532255/2021

characteristic: External Id

text: CDC-OAMD

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

text: Nasal Swab

characteristic: collection method

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Pennsylvania

characteristic: geo loc name

text: Homo sapiens

text: W

text: male

characteristic: host sex

characteristic: isolate

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/OH-CDC-MMB12538838/2021

text: CDC-OAMD

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Ohio

text: Homo sapiens

characteristic: host

characteristic: host age

text: A

text: female

text: nasal swab

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/OH-CDC-MMB12537905/2021

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Mako Medical

characteristic: collected by

characteristic: collection date

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Ohio

text: Homo sapiens

text: O

text: female

text: nasal swab

characteristic: organism

text: baseline surveillance (random sampling)

characteristic: title


characteristic: External Id

text: SARS-CoV-2/Human/USA/OH-CDC-MMB12535442/2021

text: CDC-OAMD

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

text: Nasal Swab

characteristic: collection method

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Ohio

characteristic: geo loc name

text: Homo sapiens

characteristic: host disease

text: W

characteristic: host race

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/OH-CDC-MMB12535405/2021

text: CDC-OAMD

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Ohio

text: Homo sapiens

characteristic: host

characteristic: host age

text: W

text: male

characteristic: host sex

characteristic: isolate

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/OH-CDC-MMB12535268/2021

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Mako Medical

characteristic: collected by

characteristic: collection date

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Ohio

text: Homo sapiens

text: W

text: female

text: nasal swab

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/OH-CDC-MMB12532326/2021

characteristic: External Id

text: CDC-OAMD

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

text: Nasal Swab

characteristic: collection method

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Ohio

characteristic: geo loc name

text: Homo sapiens

text: B

text: female

text: nasal swab

characteristic: organism

text: baseline surveillance (random sampling)

characteristic: title


text: SARS-CoV-2/Human/USA/OH-CDC-MMB12532099/2021

text: CDC-OAMD

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Ohio

text: Homo sapiens

characteristic: host

characteristic: host age

characteristic: host disease

text: B

characteristic: host race

text: male

text: nasal swab

text: baseline surveillance (random sampling)


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text: Mako Medical

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text: Nasal Swab

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text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Ohio

text: Homo sapiens

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text: TaqPath

text: TaqPath

text: USA: Ohio

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text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Ohio

text: Homo sapiens

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text: Nasal Swab

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text: TaqPath

text: TaqPath

text: TaqPath

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text: Homo sapiens

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text: TaqPath

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text: TaqPath

text: TaqPath

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text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Ohio

characteristic: geo loc name

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text: TaqPath

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text: TaqPath

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text: Homo sapiens

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text: Nasal Swab

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text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Ohio

text: Homo sapiens

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text: SARS-CoV-2/Human/USA/OH-CDC-MMB12526456/2021

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text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

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text: TaqPath

text: TaqPath

text: TaqPath

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text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Ohio

text: Homo sapiens

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text: Nasal Swab

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text: TaqPath

text: TaqPath

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text: Nasal Swab

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text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Ohio

text: Homo sapiens

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text: TaqPath

text: TaqPath

text: TaqPath

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text: Homo sapiens

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text: Mako Medical

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text: Nasal Swab

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text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Ohio

text: Homo sapiens

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text: TaqPath

text: TaqPath

text: TaqPath

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text: TaqPath

text: TaqPath

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characteristic: geo loc name

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text: Mako Medical

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text: TaqPath

text: TaqPath

text: TaqPath

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text: TaqPath

text: TaqPath

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text: TaqPath

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text: TaqPath

text: TaqPath

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text: TaqPath

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text: TaqPath

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text: TaqPath

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text: TaqPath

text: TaqPath

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text: TaqPath

text: TaqPath

text: TaqPath

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characteristic: geo loc name

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text: TaqPath

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characteristic: geo loc name

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text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Ohio

text: Homo sapiens

text: W

text: female

text: nasal swab

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/OH-CDC-MMB12491106/2021

text: CDC-OAMD

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text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Ohio

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: W

text: male

text: nasal swab

text: Severe acute respiratory syndrome coronavirus 2

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text: baseline surveillance (random sampling)

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text: SARS-CoV-2/Human/USA/OH-CDC-MMB12489069/2021

text: CDC-OAMD

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characteristic: NCBI submission package

characteristic: SRA accession

text: Mako Medical

characteristic: collected by

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Ohio

text: Homo sapiens

characteristic: host age

characteristic: host disease

text: W

characteristic: host race

text: female

text: nasal swab

text: baseline surveillance (random sampling)

text: CDC Sars CoV2 Sequencing Baseline Constellation


text: SARS-CoV-2/Human/USA/OH-CDC-MMB12481844/2021

characteristic: External Id

text: CDC-OAMD

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characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

characteristic: collection date

text: Nasal Swab

characteristic: collection method

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Ohio

text: Homo sapiens

text: W

text: female

characteristic: host sex

characteristic: isolate

text: nasal swab

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text: SARS-CoV-2/Human/USA/OH-CDC-MMB12431534/2021

text: CDC-OAMD

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text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Ohio

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: B

text: female

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text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/OH-CDC-MMB12385222/2021

text: CDC-OAMD

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text: Mako Medical

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text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Ohio

text: Homo sapiens

characteristic: host age

text: nasal swab

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text: baseline surveillance (random sampling)

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text: SARS-CoV-2/Human/USA/NC-CDC-MMB12607175/2021

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text: Mako Medical

characteristic: collection date

text: Nasal Swab

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text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: North Carolina

text: Homo sapiens

characteristic: host disease

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/NC-CDC-MMB12605881/2021

text: CDC-OAMD

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text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: North Carolina

characteristic: geo loc name

text: Homo sapiens

text: male

characteristic: host sex

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text: SARS-CoV-2/Human/USA/NC-CDC-MMB12605093/2021

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

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characteristic: SRA accession

text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: North Carolina

text: Homo sapiens

characteristic: host

text: female

text: nasal swab

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/NC-CDC-MMB12604733/2021

characteristic: External Id

text: CDC-OAMD

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

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text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: North Carolina

text: Homo sapiens

characteristic: host age

text: female

text: nasal swab

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text: baseline surveillance (random sampling)

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text: SARS-CoV-2/Human/USA/NC-CDC-MMB12604671/2021

text: CDC-OAMD

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text: live

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text: Mako Medical

characteristic: collection date

text: Nasal Swab

characteristic: collection method

text: Nasal Swab

text: N gene

text: S gene

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: North Carolina

text: Homo sapiens

characteristic: host disease

text: W

characteristic: host race

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/NC-CDC-MMB12604646/2021

text: CDC-OAMD

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: North Carolina

characteristic: geo loc name

text: Homo sapiens

text: W

text: female

characteristic: host sex

characteristic: isolate

text: nasal swab

text: baseline surveillance (random sampling)


characteristic: External Id

text: SARS-CoV-2/Human/USA/NC-CDC-MMB12604559/2021

text: CDC-OAMD

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

characteristic: collected by

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: North Carolina

text: Homo sapiens

characteristic: host

characteristic: host age

text: W

text: female

text: nasal swab

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/NC-CDC-MMB12603735/2021

text: CDC-OAMD

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

characteristic: collection date

text: Nasal Swab

characteristic: collection method

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: North Carolina

text: Homo sapiens

text: B

text: female

text: nasal swab

characteristic: organism

text: baseline surveillance (random sampling)

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text: SARS-CoV-2/Human/USA/NC-CDC-MMB12603731/2021

text: CDC-OAMD

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: North Carolina

characteristic: geo loc name

text: Homo sapiens

characteristic: host disease

text: B

characteristic: host race

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/NC-CDC-MMB12602084/2021

characteristic: External Id

text: CDC-OAMD

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

characteristic: collected by

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: North Carolina

text: Homo sapiens

characteristic: host

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text: B

text: male

characteristic: host sex

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text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/NC-CDC-MMB12601922/2021

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text: live

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text: Mako Medical

characteristic: collection date

text: Nasal Swab

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text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: North Carolina

text: Homo sapiens

text: B

text: female

text: nasal swab

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/NC-CDC-MMB12601798/2021

text: CDC-OAMD

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

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text: Mako Medical

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: North Carolina

characteristic: geo loc name

text: Homo sapiens

text: B

text: female

text: nasal swab

text: Severe acute respiratory syndrome coronavirus 2

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text: baseline surveillance (random sampling)

characteristic: title


text: SARS-CoV-2/Human/USA/NC-CDC-MMB12601647/2021

characteristic: External Id

text: CDC-OAMD

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

characteristic: collected by

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: North Carolina

text: Homo sapiens

characteristic: host

characteristic: host age

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text: female

text: nasal swab

text: baseline surveillance (random sampling)

text: CDC Sars CoV2 Sequencing Baseline Constellation


text: SARS-CoV-2/Human/USA/NC-CDC-MMB12601538/2021

text: CDC-OAMD

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text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

characteristic: collection date

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: North Carolina

text: Homo sapiens

text: male

characteristic: host sex

characteristic: isolate

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/NC-CDC-MMB12599564/2021

text: CDC-OAMD

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Mako Medical

text: Nasal Swab

characteristic: collection method

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: North Carolina

text: Homo sapiens

text: O

characteristic: host race

text: female

text: nasal swab

characteristic: isolation source

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text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/NC-CDC-MMB12596041/2021

characteristic: External Id

text: CDC-OAMD

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text: Mako Medical

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text: Nasal Swab

text: Nasal Swab

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text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: North Carolina

characteristic: geo loc name

text: Homo sapiens

text: female

text: nasal swab

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text: SARS-CoV-2/Human/USA/NC-CDC-MMB12585423/2021

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text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: North Carolina

text: Homo sapiens

characteristic: host

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text: SARS-CoV-2/Human/USA/NC-CDC-MMB12574889/2021

text: CDC-OAMD

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text: Mako Medical

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characteristic: collection method

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: North Carolina

text: Homo sapiens

text: B

characteristic: host race

text: female

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text: SARS-CoV-2/Human/USA/NC-CDC-MMB12563474/2021

characteristic: External Id

text: CDC-OAMD

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characteristic: SRA accession

text: Mako Medical

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text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: North Carolina

characteristic: geo loc name

text: Homo sapiens

text: male

text: nasal swab

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text: SARS-CoV-2/Human/USA/NC-CDC-MMB12561181/2021

text: CDC-OAMD

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text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

characteristic: collection date

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: North Carolina

text: Homo sapiens

characteristic: host

text: female

text: nasal swab

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text: baseline surveillance (random sampling)

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text: SARS-CoV-2/Human/USA/NC-CDC-MMB12558999/2021

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text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Mako Medical

text: Nasal Swab

characteristic: collection method

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: North Carolina

text: Homo sapiens

characteristic: host age

characteristic: host disease

text: W

characteristic: host race

text: male

text: nasal swab

text: baseline surveillance (random sampling)


characteristic: External Id

text: SARS-CoV-2/Human/USA/NC-CDC-MMB12552408/2021

text: CDC-OAMD

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

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text: Mako Medical

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text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: North Carolina

characteristic: geo loc name

text: Homo sapiens

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text: male

characteristic: host sex

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text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/NC-CDC-MMB12552292/2021

text: CDC-OAMD

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text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

characteristic: collection date

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: North Carolina

text: Homo sapiens

characteristic: host

text: B

text: male

text: nasal swab

characteristic: isolation source

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text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/NC-CDC-MMB12551973/2021

text: CDC-OAMD

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characteristic: NCBI submission model

characteristic: NCBI submission package

text: Mako Medical

text: Nasal Swab

characteristic: collection method

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: North Carolina

text: Homo sapiens

characteristic: host age

text: B

text: female

text: nasal swab

characteristic: organism

text: baseline surveillance (random sampling)

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characteristic: External Id

text: SARS-CoV-2/Human/USA/NC-CDC-MMB12547254/2021

text: CDC-OAMD

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: Mako Medical

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text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: North Carolina

characteristic: geo loc name

text: Homo sapiens

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text: CDC-OAMD

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text: SARS-CoV-2: clinical or host-associated

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text: Nasal Swab

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text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: North Carolina

text: Homo sapiens

characteristic: host

text: B

text: male

characteristic: host sex

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text: CDC-OAMD

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characteristic: NCBI submission model

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text: Mako Medical

text: Nasal Swab

characteristic: collection method

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: North Carolina

text: Homo sapiens

characteristic: host age

text: B

text: female

text: nasal swab

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)


characteristic: External Id

text: SARS-CoV-2/Human/USA/MN-CDC-MMB12544043/2021

text: CDC-OAMD

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: Mako Medical

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text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Minnesota

characteristic: geo loc name

text: Homo sapiens

text: W

text: male

text: nasal swab

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: baseline surveillance (random sampling)

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text: SARS-CoV-2/Human/USA/MI-CDC-MMB12543896/2021

text: CDC-OAMD

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text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

characteristic: collection date

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Michigan

text: Homo sapiens

characteristic: host

characteristic: host disease

text: W

characteristic: host race

text: male

text: nasal swab

text: baseline surveillance (random sampling)

text: CDC Sars CoV2 Sequencing Baseline Constellation


text: SARS-CoV-2/Human/USA/MA-CDC-MMB12504153/2021

text: CDC-OAMD

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Mako Medical

text: Nasal Swab

characteristic: collection method

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Massachusetts

text: Homo sapiens

characteristic: host age

text: W

text: female

characteristic: host sex

characteristic: isolate

text: nasal swab

text: baseline surveillance (random sampling)


characteristic: External Id

text: SARS-CoV-2/Human/USA/GA-CDC-MMB12591973/2021

text: CDC-OAMD

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: Mako Medical

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text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Georgia

characteristic: geo loc name

text: Homo sapiens

text: O

text: male

text: nasal swab

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/GA-CDC-MMB12590604/2021

text: CDC-OAMD

characteristic: INSDC first public

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characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

characteristic: collection date

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Georgia

text: Homo sapiens

characteristic: host

text: B

text: female

text: nasal swab

characteristic: organism

text: baseline surveillance (random sampling)

characteristic: title


text: SARS-CoV-2/Human/USA/GA-CDC-MMB12590220/2021

text: CDC-OAMD

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Mako Medical

text: Nasal Swab

characteristic: collection method

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Georgia

text: Homo sapiens

characteristic: host age

characteristic: host disease

text: B

characteristic: host race

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/GA-CDC-MMB12590189/2021

characteristic: External Id

text: CDC-OAMD

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: Mako Medical

characteristic: collected by

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Georgia

characteristic: geo loc name

text: Homo sapiens

text: W

text: female

characteristic: host sex

characteristic: isolate

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/GA-CDC-MMB12589276/2021

text: CDC-OAMD

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mako Medical

characteristic: collection date

text: Nasal Swab

text: Nasal Swab

text: N gene

text: S gene

text: Undetermined

text: TaqPath

text: TaqPath

text: TaqPath

text: TaqPath

text: USA: Georgia

text: Homo sapiens

characteristic: host

text: A

text: female

text: nasal swab

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)