name: Phymastichus coffea colony at Cenicafe-Biocafe

characteristic: INSDC secondary accession

text: live

text: Invertebrate

text: Adult

text: Colombia: Chinchina (Caldas)

text: Hypothenemus hampei

characteristic: host

characteristic: isolate

text: Phymastichus coffea

text: pooled male and female

text: Whole body

text: Invertebrate sample from Phymastichus coffea


status: PUBLIC

characteristic: External Id

text: Wadsworth Center NYSDOH

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: New York State Department of Health

tag: attribute

characteristic: collected by

characteristic: collection date

text: USA:NY

characteristic: geo loc name

text: Homo sapiens

text: stool

characteristic: isolation source

text: Clostridioides difficile

characteristic: organism

text: New York State Department of Health

text: human

characteristic: strain

text: Pathogen: clinical or host-associated sample from Clostridioides difficile

characteristic: title


text: Whitehead Institute for Biomedical Research

characteristic: INSDC secondary accession

text: live

text: Generic

text: Leucine-free

characteristic: diet

text: Sesn2 DKO

characteristic: genotype

text: Mus musculus

text: Liver

text: 8 days

characteristic: timepoint

text: Liver

characteristic: tissue

text: DKO - leu-free diet - day 8 - mouse 6


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Leucine-free

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 8 days

text: Liver

text: DKO - leu-free diet - day 8 - mouse 5


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Leucine-free

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 8 days

text: Liver

text: DKO - leu-free diet - day 8 - mouse 4


text: live

text: Generic

text: Leucine-free

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 8 days

text: Liver

text: DKO - leu-free diet - day 8 - mouse 3


text: live

text: Generic

text: Leucine-free

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 8 days

text: Liver

text: DKO - leu-free diet - day 8 - mouse 2


text: live

text: Generic

text: Leucine-free

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 8 days

text: Liver

text: DKO - leu-free diet - day 8 - mouse 1


text: live

text: Generic

text: Leucine-free

text: WT

text: Mus musculus

text: Liver

text: 8 days

text: Liver

text: WT - leu-free diet - day 8 - mouse 6


text: live

text: Generic

text: Leucine-free

text: WT

text: Mus musculus

text: Liver

text: 8 days

text: Liver

text: WT - leu-free diet - day 8 - mouse 5


text: live

text: Generic

text: Leucine-free

text: WT

text: Mus musculus

text: Liver

text: 8 days

text: Liver

text: WT - leu-free diet - day 8 - mouse 4


text: live

text: Generic

text: Leucine-free

text: WT

text: Mus musculus

text: Liver

text: 8 days

text: Liver

text: WT - leu-free diet - day 8 - mouse 3


text: live

text: Generic

text: Leucine-free

text: WT

text: Mus musculus

text: Liver

text: 8 days

text: Liver

text: WT - leu-free diet - day 8 - mouse 2


text: live

text: Generic

text: Leucine-free

text: WT

text: Mus musculus

text: Liver

text: 8 days

text: Liver

text: WT - leu-free diet - day 8 - mouse 1


text: live

text: Generic

text: Control

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 8 days

text: Liver

text: DKO - control diet - day 8 - mouse 5


text: live

text: Generic

text: Control

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 8 days

text: Liver

text: DKO - control diet - day 8 - mouse 4


text: live

text: Generic

text: Control

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 8 days

text: Liver

text: DKO - control diet - day 8 - mouse 3


text: live

text: Generic

text: Control

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 8 days

text: Liver

text: DKO - control diet - day 8 - mouse 2


text: live

text: Generic

text: Control

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 8 days

text: Liver

text: DKO - control diet - day 8 - mouse 1


text: live

text: Generic

text: Control

text: WT

text: Mus musculus

text: Liver

text: 8 days

text: Liver

text: WT - control diet - day 8 - mouse 5


text: live

text: Generic

text: Control

text: WT

text: Mus musculus

text: Liver

text: 8 days

text: Liver

text: WT - control diet - day 8 - mouse 4


text: live

text: Generic

text: Control

text: WT

text: Mus musculus

text: Liver

text: 8 days

text: Liver

text: WT - control diet - day 8 - mouse 3


text: live

text: Generic

text: Control

text: WT

text: Mus musculus

text: Liver

text: 8 days

text: Liver

text: WT - control diet - day 8 - mouse 2


text: live

text: Generic

text: Control

text: WT

text: Mus musculus

text: Liver

text: 8 days

text: Liver

text: WT - control diet - day 8 - mouse 1


text: live

text: Generic

text: Leucine-free

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: DKO - leu-free diet - day 1 - mouse 18


text: live

text: Generic

text: Leucine-free

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: DKO - leu-free diet - day 1 - mouse 17


text: live

text: Generic

text: Leucine-free

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: DKO - leu-free diet - day 1 - mouse 16


text: live

text: Generic

text: Leucine-free

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: DKO - leu-free diet - day 1 - mouse 15


text: live

text: Generic

text: Leucine-free

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: DKO - leu-free diet - day 1 - mouse 14


text: live

text: Generic

text: Leucine-free

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: DKO - leu-free diet - day 1 - mouse 13


text: live

text: Generic

text: Leucine-free

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: DKO - leu-free diet - day 1 - mouse 12


text: live

text: Generic

text: Leucine-free

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: DKO - leu-free diet - day 1 - mouse 11


text: live

text: Generic

text: Leucine-free

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: DKO - leu-free diet - day 1 - mouse 10


text: live

text: Generic

text: Leucine-free

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: DKO - leu-free diet - day 1 - mouse 9


text: live

text: Generic

text: Leucine-free

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: DKO - leu-free diet - day 1 - mouse 8


text: live

text: Generic

text: Leucine-free

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: DKO - leu-free diet - day 1 - mouse 7


text: live

text: Generic

text: Leucine-free

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: DKO - leu-free diet - day 1 - mouse 6


text: live

text: Generic

text: Leucine-free

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: DKO - leu-free diet - day 1 - mouse 5


text: live

text: Generic

text: Leucine-free

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: DKO - leu-free diet - day 1 - mouse 4


text: live

text: Generic

text: Leucine-free

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: DKO - leu-free diet - day 1 - mouse 3


text: live

text: Generic

text: Leucine-free

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: DKO - leu-free diet - day 1 - mouse 2


text: live

text: Generic

text: Leucine-free

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: DKO - leu-free diet - day 1 - mouse 1


text: live

text: Generic

text: Leucine-free

text: WT

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: WT - leu-free diet - day 1 - mouse 12


text: live

text: Generic

text: Leucine-free

text: WT

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: WT - leu-free diet - day 1 - mouse 11


text: live

text: Generic

text: Leucine-free

text: WT

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: WT - leu-free diet - day 1 - mouse 10


text: live

text: Generic

text: Leucine-free

text: WT

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: WT - leu-free diet - day 1 - mouse 9


text: live

text: Generic

text: Leucine-free

text: WT

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: WT - leu-free diet - day 1 - mouse 8


text: live

text: Generic

text: Leucine-free

text: WT

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: WT - leu-free diet - day 1 - mouse 7


text: live

text: Generic

text: Leucine-free

text: WT

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: WT - leu-free diet - day 1 - mouse 6


text: live

text: Generic

text: Leucine-free

text: WT

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: WT - leu-free diet - day 1 - mouse 5


text: live

text: Generic

text: Leucine-free

text: WT

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: WT - leu-free diet - day 1 - mouse 4


text: live

text: Generic

text: Leucine-free

text: WT

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: WT - leu-free diet - day 1 - mouse 3


text: live

text: Generic

text: Leucine-free

text: WT

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: WT - leu-free diet - day 1 - mouse 2


text: live

text: Generic

text: Leucine-free

text: WT

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: WT - leu-free diet - day 1 - mouse 1


text: live

text: Generic

text: Control

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: DKO - control diet - day 1 - mouse 8


text: live

text: Generic

text: Control

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: DKO - control diet - day 1 - mouse 7


text: live

text: Generic

text: Control

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: DKO - control diet - day 1 - mouse 6


text: live

text: Generic

text: Control

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: DKO - control diet - day 1 - mouse 5


text: live

text: Generic

text: Control

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: DKO - control diet - day 1 - mouse 4


text: live

text: Generic

text: Control

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: DKO - control diet - day 1 - mouse 3


text: live

text: Generic

text: Control

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: DKO - control diet - day 1 - mouse 2


text: live

text: Generic

text: Control

text: Sesn2 DKO

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: DKO - control diet - day 1 - mouse 1


text: live

text: Generic

text: Control

text: WT

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: WT - control diet - day 1 - mouse 7


text: live

text: Generic

text: Control

text: WT

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: WT - control diet - day 1 - mouse 6


text: live

text: Generic

text: Control

text: WT

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: WT - control diet - day 1 - mouse 5


text: live

text: Generic

text: Control

text: WT

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: WT - control diet - day 1 - mouse 4


text: live

text: Generic

text: Control

text: WT

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: WT - control diet - day 1 - mouse 3


text: live

text: Generic

text: Control

text: WT

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: WT - control diet - day 1 - mouse 2


text: live

text: Generic

text: Control

text: WT

text: Mus musculus

text: Liver

text: 24 hours

text: Liver

text: WT - control diet - day 1 - mouse 1


text: University of Cologne

text: live

text: Pathogen.env

text: Julia Kruse

characteristic: collected by

text: missing

text: missing

text: missing

text: missing

text: Ustilago loliicola

text: Pathogen: environmental/food/other sample from Ustilago loliicola


text: University of Cologne

text: live

text: Pathogen.env

text: Karl-Josef Mueller

text: missing

text: missing

text: missing

text: missing

text: Ustilago tritici

characteristic: organism

text: Pathogen: environmental/food/other sample from Ustilago tritici


text: University of Cologne

text: live

text: Pathogen.env

text: Karl-Josef Mueller

text: missing

text: missing

text: missing

text: missing

text: Ustilago nuda

characteristic: strain

text: Pathogen: environmental/food/other sample from Ustilago nuda


text: Nanjing Medical university

text: live

text: Generic

text: cardiomyocytes

characteristic: cell type

text: Homo sapiens

text: induced pluripotent stem cells-derived cardiomyocytes (iPSC-CMs)

characteristic: title

text: diabetic cardiomyocytes modeling+GLP-19-36 treatment

characteristic: treatment


text: Nanjing Medical university

characteristic: INSDC secondary accession

text: live

text: Generic

text: cardiomyocytes

text: Homo sapiens

text: diabetic cardiomyocytes modeling+GLP-17-36 treatment


text: Nanjing Medical university

text: live

text: Generic

text: cardiomyocytes

text: Homo sapiens

text: diabetic cardiomyocytes modeling


text: Nanjing Medical university

text: live

text: Generic

text: cardiomyocytes

text: Homo sapiens

text: untreated


Euprymna scolopes

text: University Vienna

text: live

text: Invertebrate

characteristic: collection date

text: USA: Hawaii

characteristic: geo loc name

characteristic: isolate

text: Hawaii, USA

characteristic: isolation source

text: WT

characteristic: note

text: Euprymna scolopes

text: whole embryo

text: Invertebrate sample from Euprymna scolopes


characteristic: External Id

text: turkey

characteristic: IFSAC+ Category

text: CFSAN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: MD

text: Escherichia

characteristic: genus

text: USA:MD

text: ground turkey

text: turkey (ground or minced):FOODON_00002714

characteristic: ontological term

text: Escherichia coli

text: GenomeTrakr

characteristic: project name

text: Maryland Department of Health

characteristic: sequenced by

text: food

characteristic: source type

text: coli

characteristic: species

text: Pathogen: environmental/food/other sample from Escherichia coli


text: chicken

text: CFSAN

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: MD

characteristic: collected by

characteristic: collection date

text: Escherichia

text: USA:MD

characteristic: geo loc name

text: chicken breast

text: chicken breast:FOODON_00002703

text: Escherichia coli

characteristic: organism

text: GenomeTrakr

text: Maryland Department of Health

text: food

text: coli

characteristic: strain

characteristic: title


characteristic: External Id

text: Helmholtz Centre for Infection Research, HZI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

characteristic: host

text: Bacterial colony after growing in solid media

text: bile duct of patients with Primary sclerosing cholangitis (PSC)

characteristic: isolation-source

text: not applicable

text: not applicable

text: Enterococcus sp. FR008

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Enterococcus sp. FR008


text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: not applicable

text: not applicable

text: Enterococcus sp. FR018

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Enterococcus sp. FR018


text: live

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: not applicable

text: not applicable

text: Enterococcus sp. FR036

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Enterococcus sp. FR036


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

characteristic: NCBI submission package

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: not applicable

text: not applicable

text: Staphylococcus sp. FR041

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Staphylococcus sp. FR041


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: not applicable

text: not applicable

text: Enterococcus sp. FR042

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Enterococcus sp. FR042


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: not applicable

text: not applicable

text: Enterococcus sp. FR062

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Enterococcus sp. FR062


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: not applicable

text: not applicable

text: Enterococcus sp. FR063

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Enterococcus sp. FR063


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: not applicable

text: not applicable

text: Enterococcus sp. FR068

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Enterococcus sp. FR068


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: not applicable

text: not applicable

text: Enterococcus sp. FR088

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Enterococcus sp. FR088


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: not applicable

text: not applicable

text: Enterococcus sp. FR111

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Enterococcus sp. FR111


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: not applicable

text: not applicable

text: Enterococcus sp. FR112

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Enterococcus sp. FR112


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: not applicable

text: not applicable

text: Staphylococcus sp. FR124

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Staphylococcus sp. FR124


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: not applicable

text: not applicable

text: Enterococcus sp. FR128

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Enterococcus sp. FR128


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: not applicable

text: not applicable

text: Enterococcus sp. FR133

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Enterococcus sp. FR133


text: Helmholtz Centre for Infection Research, HZI

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: not applicable

text: not applicable

text: Enterococcus sp. FR143

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Enterococcus sp. FR143


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: Bacterial colony after growing in solid media

text: bile duct of patients with Primary sclerosing cholangitis (PSC)

text: not applicable

text: not applicable

text: Enterococcus sp. FR159

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Enterococcus sp. FR159


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: not applicable

text: not applicable

text: Enterococcus sp. FR165

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Enterococcus sp. FR165


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: not applicable

text: not applicable

text: Enterococcus sp. FR169

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Enterococcus sp. FR169


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: not applicable

text: not applicable

text: Staphylococcus sp. FR179

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Staphylococcus sp. FR179


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: not applicable

text: not applicable

text: Enterococcus sp. FR180

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Enterococcus sp. FR180


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: not applicable

text: not applicable

text: Enterococcus sp. FR191

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Enterococcus sp. FR191


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: not applicable

text: not applicable

text: Enterococcus sp. FR192

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Enterococcus sp. FR192


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: not applicable

text: not applicable

text: Enterococcus sp. FR202

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Enterococcus sp. FR202


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: not applicable

text: not applicable

text: Enterococcus sp. FR203

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Enterococcus sp. FR203


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: not applicable

text: not applicable

text: Enterococcus sp. FR204

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Enterococcus sp. FR204


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: not applicable

text: not applicable

text: Enterococcus sp. FR205

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Enterococcus sp. FR205


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: not applicable

text: not applicable

text: Enterococcus sp. FR206

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Enterococcus sp. FR206


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: not applicable

text: not applicable

text: Enterococcus sp. FR207

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Enterococcus sp. FR207


text: Helmholtz Centre for Infection Research, HZI

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: not applicable

text: not applicable

text: Enterococcus sp. FR208

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Enterococcus sp. FR208


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: Bacterial colony after growing in solid media

text: not applicable

text: not applicable

text: Enterococcus sp. FR209

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Enterococcus sp. FR209


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: bile duct of patients with Primary sclerosing cholangitis (PSC)

text: not applicable

text: not applicable

text: Enterococcus sp. FR210

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Enterococcus sp. FR210


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: not applicable

text: not applicable

text: Enterococcus sp. FR211

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Enterococcus sp. FR211


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: not applicable

text: not applicable

text: Enterococcus sp. FR212

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Enterococcus sp. FR212


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: not applicable

text: not applicable

text: Enterococcus sp. IsoGale004

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Enterococcus sp. IsoGale004


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: not applicable

text: not applicable

text: Enterococcus sp. IsoGale005

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Enterococcus sp. IsoGale005


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: not applicable

text: not applicable

text: Streptococcus sp. IsoGale021

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus sp. IsoGale021


text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: missing

text: Keywords: GSC:MIxS;MIGS:5.0

text: not applicable

text: not applicable

text: not applicable

text: Germany

text: Homo sapiens

text: not applicable

text: not applicable

text: Streptococcus sp. IsoGale022

text: not applicable

text: MIGS Cultured Bacterial/Archaeal sample from Streptococcus sp. IsoGale022


text: Rossi, School of Biomedical Engineering, University of British Columbia

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: whole musle

characteristic: cell type

text: C57BL/6J (male)

characteristic: genotype

text: Mus musculus

text: Following 3 weeks of CSF1R inhibition and 3 days of withdrawal (switch to a regular diet), TAs were damaged. 18 hours after injury, total RNA was extracted from one TA for RNA sequencing.

text: Damaged TA 18 hours post injury

characteristic: tissue


text: live

text: Generic

text: whole musle

text: C57BL/6J (male)

text: Mus musculus

characteristic: organism

text: Following 3 weeks of treatment with the control diet and 3 days of withdrawal (switch to a regular diet), TAs were damaged. 18 hours after injury, total RNA was extracted from one TA for RNA sequencing.

text: Damaged TA 18 hours post injury


text: live

text: Generic

text: whole musle

text: C57BL/6J (male)

text: Mus musculus

text: Following 3 weeks of CSF1R inhibition and 3 days of withdrawal (switch toa regular diet), TAs were damaged. 12 hours after injury, total RNA was extracted from one TA for RNA sequencing.

text: Damaged TA 12 hours post injury

characteristic: title


characteristic: External Id

text: live

text: Generic

text: whole musle

text: C57BL/6J (male)

text: Mus musculus

text: Following 3 weeks of treatment with the control diet and 3 days of withdrawal (switch to a regular diet), TAs were damaged. 12 hours after injury, total RNA was extracted from one TA for RNA sequencing.

text: Damaged TA 12 hours post injury


characteristic: INSDC center name

text: live

text: Generic

text: whole musle

text: DMDmdx (female)

text: Mus musculus

text: Total RNA extracted from a TA of an 8-month old DMDmdx mouse following 6 months of CSF1R inhibition

text: Tibialis Anterior muscle


characteristic: INSDC first public

text: live

text: Generic

text: whole musle

text: DMDmdx (female)

text: Mus musculus

text: Total RNA extracted from a TA of an 8-month old DMDmdx mouse following 6 months of treatment with the control diet

text: Tibialis Anterior muscle


characteristic: INSDC last update

text: live

text: Generic

text: whole musle

text: DMDmdx:PDGFRaEGFP (female)

text: Mus musculus

text: Total RNA extracted from a TA of an 8-month old DMDmdx:PDGFRaEGFP mouse following 6 months of treatment with the control diet

text: Tibialis Anterior muscle


text: live

text: Generic

text: whole musle

text: DMDmdx:PDGFRaEGFP (female)

text: Mus musculus

text: Total RNA extracted from a TA of an 8-month old DMDmdx:PDGFRaEGFP mouse following 6 months of CSF1R inhibition

text: Tibialis Anterior muscle


text: live

text: Generic

text: Macrophage

text: The WT partner of a WT/GFP female parabiotic pair

text: Mus musculus

text: PI- CD45+ CD11B+ LY6G/SIGLECF- GFP+ cells sorted by FACS

text: Damaged TAs 6 days post injury


text: live

text: Generic

text: Macrophage

text: Mus musculus

text: Damaged TAs 4 days post injury


text: live

text: Generic

text: Macrophage

text: Mus musculus

text: Damaged Tibialis Anterior (TA)s 2 days post injury


text: live

text: Generic

text: Macrophage

text: Cx3cr1-GFP (male)

text: Mus musculus

text: CD45+ CD11B+ LY6G- F4/80+ MERTK+ MHCII- GFP- cells sorted by FACS

text: Skeletal muscle at steady state


text: live

text: Generic

text: Macrophage

text: Cx3cr1-GFP (male)

text: Mus musculus

text: CD45+ CD11B+ LY6G- F4/80+ MERTK+ MHCII- GFP+ cells sorted by FACS

text: Skeletal muscle at steady state


text: live

text: Generic

text: Macrophage

text: Cx3cr1-GFP (male)

text: Mus musculus

text: CD45+ CD11B+ LY6G- F4/80+ MERTK+ MHCII+ GFP+ cells sorted by FACS

text: Skeletal muscle at steady state


text: live

text: Generic

text: Macrophage

text: Cx3cr1-GFP (male)

text: Mus musculus

text: CD45+ CD11B+ LY6G- F4/80+ MERTK+ MHCII+ GFP- cells sorted by FACS

text: Skeletal muscle at steady state


text: live

text: Generic

text: Hematopoietic cells

text: DMDmdx:PDGFRaEGFP (male)

text: Mus musculus

text: PI- Hoechst+ CD45+ cells from skeletal muscle of a one-year old dystrophic mouse following 10 months of CSF1R inhibition

text: Skeletal muscle

text: 73C5 MDX PLX


text: Rossi, School of Biomedical Engineering, University of British Columbia

text: live

text: Generic

text: Hematopoietic cells

text: DMDmdx (male)

text: Mus musculus

text: Skeletal muscle

text: 73C6 MDX PLX


text: live

text: Generic

text: Hematopoietic cells

text: DMDmdx (male)

text: Mus musculus

text: PI- Hoechst+ CD45+ cells from skeletal muscle of a one-year old dystrophic mouse following 10 months of treatment with the control diet

text: Skeletal muscle

text: 73C9 MDX CNTL


text: live

text: Generic

text: Hematopoietic cells

text: DMDmdx (male)

text: Mus musculus

text: Skeletal muscle

text: 73C8 MDX CNTL


text: live

text: Generic

text: Macrophage

text: WT (male)

text: Mus musculus

text: A balanced number of PI- Hoechst+ CD45+ CD11B+ LY6G/SIGLECF- TIM4+ and PI- Hoechst+ CD45+ CD11B+ LY6G/SIGLECF- TIM4- cells were sorted by FACS. Hash1: 8hr sample #1, Hash2: 8hr sample #2, Hash3 3hr sample #1, Hash4 3hr sample #2

text: Damaged TAs 3 hours and 8 hours post injury

text: HASH-TIM43hr8hrMQ HTO


text: live

text: Generic

text: Myelomonocytic cells

text: WT (male)

text: Mus musculus

text: PI- Hoechst+ CD45+ CD11B+ LY6G/SIGLECF- F4/80+ cells sorted by FACS. Hash 1 and 2: damaged muscle 18hr after injury, Hash 3 and 4: undamaged muscle. Only undamaged muscle data is shown in the manuscript.

text: Skeletal muscle at steady state and 18hr after injury

text: Hashed_18h_MQ HTO


text: live

text: Generic

text: Macrophage

text: The WT partner of a GFP/WT female parabiotic pair

text: Mus musculus

text: PI- CD45+ CD11B+ LY6G/SIGLECF- GFP+ cells spiked with a few PI- CD45+ CD11B+ LY6G/SIGLECF- TIM4+ GFP- cells sorted by FACS

text: Damaged TAs 6 hours, 2 days, 4 days, and 8 days after injury

text: Parabiosis HTO


text: live

text: Generic

text: Macrophage

text: WT (male)

text: Mus musculus


text: live

text: Generic

text: Myelomonocytic cells

text: WT (male)

text: Mus musculus


text: live

text: Generic

text: Macrophage

text: Mus musculus

text: Parabiosis


text: New York State GenomeTrakr

text: live

text: Pathogen.cl

text: New York State Department of Health

characteristic: collected by

characteristic: collection date

text: USA:NY

characteristic: geo loc name

text: Homo sapiens

text: stool

characteristic: isolation source

text: Clostridium perfringens

text: GenomeTrakr; LFFM-FY2

characteristic: project name

text: New York State Department of Health

text: human

characteristic: strain

text: Pathogen: clinical or host-associated sample from Clostridium perfringens


text: the first affiliated hospitail of USTC, University of Science and Technology of China

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: cell line

text: Homo sapiens

text: CpG-HCQ (D8)

text: CpG-HCQ

characteristic: trearment


text: live

text: Generic

characteristic: SRA accession

text: Homo sapiens

characteristic: organism

text: CpG-HCQ (C8)

characteristic: title

text: CpG-HCQ


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Homo sapiens

text: CpG-HCQ (B8)

text: CpG-HCQ


characteristic: INSDC last update

text: live

text: Generic

text: Homo sapiens

text: CpG (D5)

text: CpG


text: live

text: Generic

text: Homo sapiens

text: CpG (C5)

text: CpG


text: live

text: Generic

text: Homo sapiens

text: CpG (B5)

text: CpG


text: live

text: Generic

text: Homo sapiens

text: PBS (D2)

text: PBS


text: live

text: Generic

text: Homo sapiens

text: PBS (C2)

text: PBS


text: live

text: Generic

text: Homo sapiens

text: PBS (B2)

text: PBS


text: Washington State Department of Agriculture FS&CS Lab

text: live

text: Pathogen.env

text: Kansas State University Veterinary Diagnostic Laboratory

characteristic: collected by

characteristic: collection date

text: USA:KS

characteristic: geo loc name

text: swine feces

text: Escherichia coli

text: GenomeTrakr; LFFM-FY2

text: animal

text: Pathogen: environmental/food/other sample from Escherichia coli


text: live

text: Pathogen.env

text: USA:KS

text: swine feces

characteristic: isolation source

text: Escherichia coli

text: GenomeTrakr; LFFM-FY2

characteristic: project name

text: Washington State Department of Agriculture

text: animal

characteristic: strain


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: USA:IA

text: swine feces

text: Escherichia coli

text: GenomeTrakr; LFFM-FY2

text: animal


text: live

text: Pathogen.env

characteristic: NCBI submission package

text: USA:MN

text: swine feces

text: Escherichia coli

text: GenomeTrakr; LFFM-FY2

text: animal


text: live

text: Pathogen.env

characteristic: SRA accession

text: USA:OH

text: swine feces

text: Escherichia coli

text: GenomeTrakr; LFFM-FY2

text: animal


text: live

text: Pathogen.env

text: USA:SD

text: swine feces

text: Escherichia coli

characteristic: organism

text: GenomeTrakr; LFFM-FY2

text: animal


text: live

text: Pathogen.env

text: USA:OK

text: swine feces

text: Escherichia coli

text: GenomeTrakr; LFFM-FY2

text: animal

characteristic: title


characteristic: External Id

text: INRAE

text: live

text: Plant

text: missing

characteristic: age

text: Jemalong A17

characteristic: cultivar

text: Nodules were collected on the first 40 cm of roots below the root collar at 21 days post inoculation (dpi).

characteristic: description

text: missing

text: Medicago truncatula cv Jemalong A17 seeds were germinated and transferred to aeroponic caissons under the following chamber conditions: temperature: 22C; 75% hygrometry, light intensity: 200 E m-2 s-1, light-dark photoperiod: 16-8 h. Plants were grown for 7 days in caisson growth medium (Journet, E.P., El-Gachtouli, N., Vernoud, V., et al. 2001, Medicago truncatula ENOD11: a novel RPRP-encoding early nodulin gene expressed during mycorrhization in arbuscule-containing cells, Mol. Plant Microbe Interact) supplemented with 10 mM NH4NO3, before growth in nitrogen-free medium for 3 days prior to inoculation with S. meliloti.

text: Medicago truncatula

text: distal nodule 21dpi

characteristic: tissue

text: M. truncatula and S. meliloti: 21 dpi dist

text: Inoculation with Sinorhizobium meliloti 2011

characteristic: treatment


text: INRAE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Plant

text: missing

text: Jemalong A17

text: Nodules were collected on the first 40 cm of roots below the root collar at 14 days post inoculation (dpi).

text: missing

text: Medicago truncatula

text: whole nodule 14dpi

text: M. truncatula and S. meliloti: 14 dpi


text: INRAE

text: live

text: Plant

text: missing

text: Jemalong A17

text: missing

text: Medicago truncatula

text: whole nodule 14dpi

text: M. truncatula and S. meliloti: KNO3

text: Inoculation with Sinorhizobium meliloti 2011. 10 mM KNO3 was added to the medium at 13dpi and whole nodules ware harvested after 24 hours.


text: INRAE

text: live

text: Plant

text: missing

text: Jemalong A17

text: missing

text: Medicago truncatula

text: whole nodule 14dpi

text: M. truncatula and S. meliloti: NaCl

text: Inoculation with Sinorhizobium meliloti 2011. 150 mM NaCl was added to the medium at 13dpi and whole nodules ware harvested after 24 hours


text: INRAE

text: live

text: Plant

text: missing

text: Jemalong A17

text: missing

text: Medicago truncatula

text: whole nodule 21dpi

text: M. truncatula and S. meliloti: 21 dpi


text: INRAE

text: live

text: Plant

text: missing

text: Jemalong A17

text: Nodules were collected on the first 40 cm of roots below the root collar at 28 days post inoculation (dpi).

text: missing

text: Medicago truncatula

text: whole nodule 28dpi

text: M. truncatula and S. meliloti: 28 dpi


text: INRAE

text: live

text: Plant

text: missing

text: Jemalong A17

text: missing

text: Medicago truncatula

text: proximal nodule 21dpi

text: M. truncatula and S. meliloti: 21 dpi


text: UNC Chapel Hill

text: live

text: Viral

characteristic: Replicate

text: 30 mg/kg GS-621753 QD beginning at 12 hours post infection

characteristic: Treatment

text: USA: North Carolina

text: Homo sapiens

characteristic: host

characteristic: isolate

text: laboratory

text: Mus musculus

text: Viral sample from Severe acute respiratory syndrome coronavirus 2


text: UNC Chapel Hill

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Viral

characteristic: NCBI submission model

characteristic: NCBI submission package

text: USA: North Carolina

text: Homo sapiens

text: laboratory

text: Mus musculus

text: Severe acute respiratory syndrome coronavirus 2


characteristic: External Id

text: UNC Chapel Hill

text: live

text: Viral

characteristic: SRA accession

text: 60 mg/kg GS-621753 QD beginning at 12 hours post infection

text: USA: North Carolina

text: Homo sapiens

text: laboratory

text: Mus musculus

characteristic: organism

characteristic: title


text: UNC Chapel Hill

text: live

text: Viral

text: 60 mg/kg GS-621753 QD beginning at 24 hours post infection

text: USA: North Carolina

text: Homo sapiens

text: laboratory

text: Mus musculus


text: UNC Chapel Hill

text: live

text: Viral

text: vehicle

text: USA: North Carolina

text: Homo sapiens

text: laboratory

text: Mus musculus


text: GenomeTrakr Project: Thakur Molecular Epidemiology Laboratory, NC State University

text: live

text: Pathogen.env

text: North Carolina State University|College of Veterinary Medicine|Thakur Molecular Epidemiology Laboratory

characteristic: collected by

characteristic: collection date

text: USA: NC

characteristic: geo loc name

text: Gallus gallus

text: Colibacillosis

characteristic: host disease

text: Chicken yolk sac

characteristic: isolation source

text: not collected

characteristic: lat lon

text: Escherichia coli

text: GenomeTrakr; LFFM-FY2

text: animal

characteristic: strain


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: USA: NC

text: Gallus gallus

characteristic: host

text: Colibacillosis

text: Chicken spleen

text: not collected

text: Escherichia coli

text: GenomeTrakr; LFFM-FY2

text: animal

text: Pathogen: environmental/food/other sample from Escherichia coli


text: New York State GenomeTrakr

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

text: New York State Department of Health

text: USA:NY

text: Homo sapiens

text: stool

text: Yersinia enterocolitica

text: GenomeTrakr; LFFM-FY2

characteristic: project name

text: New York State Department of Health

text: human

text: Pathogen: clinical or host-associated sample from Yersinia enterocolitica


characteristic: External Id

text: Applied Sciences, Northumbria University

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: BHTB

characteristic: compartment

text: Stage 33/34

characteristic: developmental stage

text: Scyliorhinus canicula

characteristic: organism

text: Dental lamina, dentition and oral epithelium

text: Dental lamina; Oral epithelia

characteristic: tissue

text: BHTB rep3


text: live

text: Generic

text: BHTB

text: Stage 33/34

text: Scyliorhinus canicula

text: Dental lamina; Oral epithelia

text: BHTB rep2

characteristic: title


text: live

text: Generic

text: BHTB

text: Stage 33/34

text: Scyliorhinus canicula

text: Dental lamina; Oral epithelia

text: BHTB rep1


text: live

text: Generic

text: TTJ

text: Stage 33/34

text: Scyliorhinus canicula

text: Dental lamina; Oral epithelia

text: TTJ rep3


text: live

text: Generic

text: TTJ

text: Stage 33/34

text: Scyliorhinus canicula

text: Dental lamina; Oral epithelia

text: TTJ rep2


text: live

text: Generic

text: TTJ

text: Stage 33/34

text: Scyliorhinus canicula

text: Dental lamina; Oral epithelia

text: TTJ rep1


text: live

text: Generic

text: SL

text: Stage 33/34

text: Scyliorhinus canicula

text: Dental lamina; Oral epithelia

text: SL rep3


text: live

text: Generic

text: SL

text: Stage 33/34

text: Scyliorhinus canicula

text: Dental lamina; Oral epithelia

text: SL rep2


text: live

text: Generic

text: SL

text: Stage 33/34

text: Scyliorhinus canicula

text: Dental lamina; Oral epithelia

text: SL rep1


text: live

text: Generic

text: LT

text: Stage 33/34

text: Scyliorhinus canicula

text: Dental lamina; Oral epithelia

text: LT rep3


text: live

text: Generic

text: LT

text: Stage 33/34

text: Scyliorhinus canicula

text: Dental lamina; Oral epithelia

text: LT rep2


text: live

text: Generic

text: LT

text: Stage 33/34

text: Scyliorhinus canicula

text: Dental lamina; Oral epithelia

text: LT rep1


text: live

text: Generic

text: ET

text: Stage 33/34

text: Scyliorhinus canicula

text: Dental lamina; Oral epithelia

text: ET rep3


text: live

text: Generic

text: ET

text: Stage 33/34

text: Scyliorhinus canicula

text: Dental lamina; Oral epithelia

text: ET rep2


text: live

text: Generic

text: ET

text: Stage 33/34

text: Scyliorhinus canicula

text: Dental lamina; Oral epithelia

text: ET rep1


text: The First Affiliated Hospital of Soochow University

text: live

text: Human

characteristic: age

text: Jiangsu Biobank of Clinical Resources

text: B-cell acute lymphocytic leukemia

characteristic: disease

text: Asian

characteristic: isolate

text: Homo sapiens

text: BMNC

text: female

characteristic: sex

text: Bone Marrow

text: Case 1


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Human

text: Jiangsu Biobank of Clinical Resources

text: B-cell acute lymphocytic leukemia

text: Asian

text: Homo sapiens

text: BMNC

text: male

text: Bone Marrow

text: Case 2


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Human

characteristic: NCBI submission model

text: Jiangsu Biobank of Clinical Resources

text: B-cell acute lymphocytic leukemia

text: Relapse

text: Asian

text: Homo sapiens

text: BMNC

text: female

text: Bone Marrow

text: Case 3


characteristic: External Id

text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

text: RNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Bone marrow

characteristic: body site

text: GRU

text: Buffy Coat

characteristic: histological type

text: Yes

characteristic: is tumor

text: Homo sapiens

text: male

text: Case Set

characteristic: study design

text: Multiple Myeloma

characteristic: study disease

characteristic: study name

text: Yes

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Multiple Myeloma tumor RNA sample from Bone marrow of a human male participant in the dbGaP study Characterizing the Role of the Immune Microenvironment in Multiple Myeloma Progression at a Single Cell Level


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: SRA accession

text: RNA

text: Bone marrow

text: GRU

text: Buffy Coat

text: Yes

text: Homo sapiens

characteristic: organism

text: female

characteristic: sex

text: Case Set

text: Multiple Myeloma

text: Yes

text: Multiple Myeloma tumor RNA sample from Bone marrow of a human female participant in the dbGaP study Characterizing the Role of the Immune Microenvironment in Multiple Myeloma Progression at a Single Cell Level

characteristic: title


characteristic: External Id

text: dbGaP

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: RNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Bone marrow

characteristic: body site

text: GRU

text: Buffy Coat

characteristic: histological type

text: Yes

characteristic: is tumor

text: Homo sapiens

text: male

text: Case Set

text: Multiple Myeloma

text: Characterizing the Role of the Immune Microenvironment in Multiple Myeloma Progression at a Single Cell Level

text: Yes


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: RNA

text: Bone marrow

text: GRU

text: Buffy Coat

text: Yes

text: Homo sapiens

text: female

text: Case Set

characteristic: study design

text: Multiple Myeloma

characteristic: study disease

characteristic: study name

text: Yes

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle


characteristic: External Id

text: First Affiliated Hospital of Sun Yat-sen University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Human

characteristic: NCBI submission model

characteristic: SRA accession

text: passage 3

characteristic: age

text: Huada Gene

text: 3 replicates

characteristic: description

text: cell transfection

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: not applicable

characteristic: sex

text: gastric cancer

characteristic: tissue

text: Human sample from Homo sapiens

characteristic: title

text: overexpression of CPEB3

characteristic: treatment


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Human

characteristic: NCBI submission package

text: passage 3

text: Huada Gene

text: 3 control replicates

text: cell transfection

text: Homo sapiens

text: not applicable

text: gastric cancer

text: Human sample from Homo sapiens

text: Control


characteristic: External Id

text: Shenzhen University

text: live

text: Human

text: not applicable

text: Chen lab in shenzhen university

text: macrophages Non-exposed

text: Homo sapiens

text: biological replicate 1

characteristic: replicate

text: not applicable

text: not collected


text: Shenzhen University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Human

text: not applicable

text: Chen lab in shenzhen university

text: macrophages Non-exposed

text: Homo sapiens

text: biological replicate 2

text: not applicable

text: not collected


text: Shenzhen University

text: live

characteristic: INSDC status

text: Human

characteristic: NCBI submission model

text: not applicable

text: Chen lab in shenzhen university

text: macrophages Non-exposed

text: Homo sapiens

text: biological replicate 3

text: not applicable

text: not collected


text: Shenzhen University

text: live

text: Human

characteristic: SRA accession

text: not applicable

characteristic: age

text: Chen lab in shenzhen university

text: macrophages Non-infcted

text: Homo sapiens

text: biological replicate 1

text: not applicable

text: not collected


text: Shenzhen University

text: live

text: Human

text: not applicable

text: Chen lab in shenzhen university

text: macrophages Non-infcted

characteristic: isolate

text: Homo sapiens

text: biological replicate 2

text: not applicable

text: not collected


text: Shenzhen University

text: live

text: Human

text: not applicable

text: Chen lab in shenzhen university

text: macrophages Non-infcted

text: Homo sapiens

characteristic: organism

text: biological replicate 3

text: not applicable

text: not collected


text: Shenzhen University

text: live

text: Human

text: not applicable

text: Chen lab in shenzhen university

text: macrophages with Dead Mtb

text: Homo sapiens

text: biological replicate 1

text: not applicable

characteristic: sex

text: not collected


text: Shenzhen University

text: live

text: Human

text: not applicable

text: Chen lab in shenzhen university

text: macrophages with Dead Mtb

text: Homo sapiens

text: biological replicate 2

text: not applicable

text: not collected

characteristic: tissue


text: Shenzhen University

text: live

text: Human

text: not applicable

text: Chen lab in shenzhen university

text: macrophages with Dead Mtb

text: Homo sapiens

text: biological replicate 3

text: not applicable

text: not collected

characteristic: title


text: Shenzhen University

text: live

text: Human

text: not applicable

text: Chen lab in shenzhen university

text: macrophages with Live Mtb

text: Homo sapiens

text: biological replicate 1

text: not applicable

text: not collected


text: Shenzhen University

text: live

text: Human

text: not applicable

text: Chen lab in shenzhen university

text: macrophages with Live Mtb

text: Homo sapiens

text: biological replicate 2

text: not applicable

text: not collected


text: Shenzhen University

text: live

text: Human

text: not applicable

text: Chen lab in shenzhen university

text: macrophages with Live Mtb

text: Homo sapiens

text: biological replicate 3

text: not applicable

text: not collected


text: live

text: Human

text: not applicable

text: gastric adenocarcinoma

text: The 80% was used in immunoprecipitation reactions with anti-FLAG Ab and named IP

characteristic: description

text: Homo sapiens

text: not applicable

text: not applicable


characteristic: INSDC center name

text: live

text: Human

text: not applicable

text: gastric adenocarcinoma

text: The 20% lysis sample was stored and named input

text: Homo sapiens

text: not applicable

text: not applicable


text: nuts

characteristic: IFSAC+ Category

text: CFSAN

characteristic: INSDC first public

text: live

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: FDA

characteristic: collected by

characteristic: collection date

characteristic: fda lab id

text: Salmonella

characteristic: genus

text: Viet Nam

characteristic: geo loc name

text: frozen palm nut

characteristic: isolation source

text: frozen:PATO_0001985| nut (whole):FOODON_03303171| palmar part of manus:UBERON_0008878

characteristic: ontological term

text: Salmonella enterica

text: GenomeTrakr

characteristic: project name

text: United States Food and Drug Administration|Office of Regulatory Affairs|Pacific Southwest Food and Feed Laboratory

characteristic: sequenced by

text: food

characteristic: source type

text: enterica

characteristic: species

characteristic: strain

text: Pathogen: environmental/food/other sample from Salmonella enterica


characteristic: External Id

text: multi-ingredient| crustaceans

text: CFSAN

characteristic: INSDC center name

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: FDA

text: Listeria

text: Mexico

text: frozen cooked shrimp patties

text: patty:FOODON_00002951| shrimp (cooked| frozen):FOODON_03308827

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

text: United States Food and Drug Administration|Office of Regulatory Affairs|Denver Laboratory

text: food

text: monocytogenes

text: Pathogen: environmental/food/other sample from Listeria monocytogenes

characteristic: title


text: Center for Translational Research in Infection and Inflammation, Medicine, Tulane University

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

characteristic: animal id

text: Macaca mulatta

text: BRUSH

text: bronchial brushing

characteristic: tissue

text: vaping exposed

characteristic: treatment


text: live

text: Generic

text: Macaca mulatta

text: BAL

text: bronchoalveolar lavage

text: vaping exposed


text: live

text: Generic

text: Macaca mulatta

text: BAL

text: bronchoalveolar lavage

text: no exposure


text: FDA CVM NARMS - Texas Tech University

text: live

text: Pathogen.env

text: Texas Tech University|Department of Animal and Food Sciences

characteristic: collected by

characteristic: collection date

text: USA:TX

characteristic: geo loc name

text: chicken breasts

characteristic: isolation source

text: Escherichia coli

text: NARMS

characteristic: project name

text: Texas Tech University Center for Biotechnology and Genomics

text: food

text: Pathogen: environmental/food/other sample from Escherichia coli


characteristic: External Id

text: FDA CVM NARMS - Texas Tech University

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Pathogen.env

text: USA:TX

text: ground beef

text: Escherichia coli

text: NARMS

text: food

characteristic: strain


text: FDA CVM NARMS - Texas Tech University

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: USA:TX

text: ground turkey

text: Escherichia coli

characteristic: organism

text: NARMS

text: food


text: FDA CVM NARMS - Texas Tech University

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: USA:TX

text: chicken thighs

text: Escherichia coli

text: NARMS

text: food

characteristic: title


text: FDA CVM NARMS - Texas Tech University

text: live

text: Pathogen.env

characteristic: collected by

text: USA:OK

text: ground turkey

text: Escherichia coli

text: NARMS

text: food


text: Colorado State University

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMS:5.0

characteristic: description

text: not applicable

text: not applicable

text: not applicable

text: South Korea

characteristic: isolate

text: Anaerobic digesters

text: 35.1546243 N 128.0994027 E

text: anaerobic digester metagenome

text: MIMS Environmental/Metagenome sample from anaerobic digester metagenome


text: Wadsworth Center NYSDOH

text: live

text: Pathogen.cl

text: New York State Department of Health

characteristic: collection date

text: USA:NY

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: stool

characteristic: isolation source

text: Clostridioides difficile

text: New York State Department of Health

text: human

text: Pathogen: clinical or host-associated sample from Clostridioides difficile


characteristic: External Id

text: Harbin Institute of Technology

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: China:Harbin

text: AD sludge

text: 45.01 N 127.05 E

text: sludge metagenome

text: Metagenome or environmental sample from sludge metagenome


text: Harbin Institute of Technology

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

text: China:Harbin

text: AD sludge

text: 45.01 N 127.06 E

text: sludge metagenome


text: Harbin Institute of Technology

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: China:Harbin

text: AD sludge

text: 45.01 N 127.07 E

text: sludge metagenome

characteristic: organism


text: Harbin Institute of Technology

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: China:Harbin

text: AD sludge

text: 45.01 N 127.08 E

text: sludge metagenome


text: Harbin Institute of Technology

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: China:Harbin

text: AD sludge

text: 45.01 N 127.09 E

text: sludge metagenome

characteristic: title


text: Vet-LIRN Project: Ohio Department of Agriculture | Animal Disease Diagnostic Laboratory

text: live

text: Pathogen.env

text: Auburn University Center for Veterinary Medicine Diagnostic Laboratory

characteristic: collected by

text: USA:AL

text: raw pet food

text: not provided

characteristic: lat lon

text: Enterococcus faecalis

text: Vet-LIRN

characteristic: project name

text: Ohio Department of Agriculture|Animal Disease Diagnostic Laboratory

text: environmental

characteristic: strain

text: Pathogen: environmental/food/other sample from Enterococcus faecalis


text: live

text: Pathogen.env

characteristic: collection date

text: USA:AL

characteristic: geo loc name

text: raw pet food

text: not provided

text: Enterococcus faecium

text: Vet-LIRN

text: environmental

text: Pathogen: environmental/food/other sample from Enterococcus faecium


characteristic: External Id

text: live

text: Pathogen.env

text: USA:AL

text: raw pet food

characteristic: isolation source

text: not provided

text: Acinetobacter baumannii

text: Vet-LIRN

text: environmental

text: Pathogen: environmental/food/other sample from Acinetobacter baumannii


characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Pathogen.env

text: USA:AL

text: raw pet food

text: not provided

text: Cronobacter sp. AG21-0635

text: Vet-LIRN

text: environmental

text: Pathogen: environmental/food/other sample from Cronobacter sp. AG21-0635


text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: USA:AL

text: raw pet food

text: not provided

text: Klebsiella oxytoca

text: Vet-LIRN

text: environmental

text: Pathogen: environmental/food/other sample from Klebsiella oxytoca


text: live

text: Pathogen.env

characteristic: NCBI submission package

text: USA:AL

text: raw pet food

text: not provided

text: Pseudescherichia vulneris

characteristic: organism

text: Vet-LIRN

text: environmental

text: Pathogen: environmental/food/other sample from Pseudescherichia vulneris


characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

text: USA:AL

text: raw pet food

text: not provided

text: Citrobacter freundii

text: Vet-LIRN

text: environmental

text: Pathogen: environmental/food/other sample from Citrobacter freundii


text: NIAID, NIH

text: live

text: Human

characteristic: SRA accession

text: not applicable

characteristic: age

text: Boritz

text: J-Lat

text: T cells

text: unsorted Jlat

characteristic: description

text: not applicable

characteristic: isolate

text: Homo sapiens

text: replicate 1

characteristic: replicate

text: unsorted Jlat

text: not applicable

characteristic: sex

text: T cells

characteristic: tissue

text: human cell line

characteristic: title


characteristic: External Id

text: NIAID, NIH

text: live

text: Human

text: not applicable

text: Boritz

text: J-Lat

text: T cells

text: unsorted Jlat

text: not applicable

text: Homo sapiens

text: replicate 2

text: unsorted Jlat

text: not applicable

text: T cells

text: human cell line


text: NIAID, NIH

characteristic: INSDC center name

text: live

text: Human

text: not applicable

text: Boritz

text: J-Lat

text: T cells

text: unsorted Jlat

text: not applicable

text: Homo sapiens

text: replicate 3

text: unsorted Jlat

text: not applicable

text: T cells

text: human cell line


text: NIAID, NIH

characteristic: INSDC last update

text: live

text: Human

text: not applicable

text: Boritz

text: J-Lat

text: T cells

text: unsorted Jlat

text: not applicable

text: Homo sapiens

text: replicate 4

text: unsorted Jlat

text: not applicable

text: T cells

text: human cell line


text: NIAID, NIH

text: live

characteristic: INSDC status

text: Model organism or animal

text: not applicable

text: Boritz

text: T cells + Fibroblasts

text: unsorted Jlat-3T3

text: Homo sapiens/Mus musculus

text: mixed culture

text: replicate 1

text: unsorted Jlat-3T3

text: not applicable

text: T cells + Fibroblasts

text: human/mouse mix cell line


text: NIAID, NIH

text: live

text: Model organism or animal

characteristic: NCBI submission model

text: not applicable

text: Boritz

text: T cells + Fibroblasts

text: unsorted Jlat-3T4

text: Homo sapiens/Mus musculus

text: mixed culture

text: replicate 2

text: unsorted Jlat-3T4

text: not applicable

text: T cells + Fibroblasts

text: human/mouse mix cell line


text: NIAID, NIH

text: live

text: Model organism or animal

characteristic: NCBI submission package

text: not applicable

text: Boritz

text: T cells + Fibroblasts

text: unsorted Jlat-3T5

text: Homo sapiens/Mus musculus

text: mixed culture

text: replicate 3

text: unsorted Jlat-3T5

text: not applicable

text: T cells + Fibroblasts

text: human/mouse mix cell line


text: NIAID, NIH

text: live

text: Model organism or animal

text: not applicable

text: Boritz

text: T cells + Fibroblasts

text: unsorted Jlat-3T6

text: Homo sapiens/Mus musculus

text: mixed culture

characteristic: organism

text: replicate 4

text: unsorted Jlat-3T6

text: not applicable

text: T cells + Fibroblasts

text: human/mouse mix cell line


text: NIAID, NIH

characteristic: INSDC first public

text: live

text: Human

text: not applicable

text: Boritz

text: Fibroblasts

text: unsorted 3T3

text: not applicable

text: Homo sapiens

text: replicate 1

text: unsorted 3T3

text: not applicable

text: Fibroblasts

text: mouse cell line


text: NIAID, NIH

characteristic: INSDC secondary accession

text: live

text: Human

text: not applicable

text: Boritz

text: Fibroblasts

text: unsorted 3T3

text: not applicable

text: Homo sapiens

text: replicate 2

text: unsorted 3T3

text: not applicable

text: Fibroblasts

text: mouse cell line


text: NIAID, NIH

text: live

text: Human

characteristic: SRA accession

text: not applicable

text: Boritz

text: Fibroblasts

text: unsorted 3T3

text: not applicable

text: Homo sapiens

text: replicate 3

text: unsorted 3T3

text: not applicable

text: Fibroblasts

text: mouse cell line


text: NIAID, NIH

text: live

text: Human

text: not applicable

characteristic: age

text: Boritz

text: Fibroblasts

text: unsorted 3T3

text: not applicable

text: Homo sapiens

text: replicate 4

text: unsorted 3T3

text: not applicable

text: Fibroblasts

text: mouse cell line


text: NIAID, NIH

text: live

text: Model organism or animal

text: not applicable

text: Boritz

text: T cells + Fibroblasts

text: sorted Jlat-3T3

characteristic: description

text: Homo sapiens/Mus musculus

text: mixed culture

text: replicate 1

text: sorted Jlat-3T3

text: not applicable

text: T cells + Fibroblasts

text: human/mouse mix cell line


text: NIAID, NIH

text: live

text: Model organism or animal

text: not applicable

text: Boritz

text: T cells + Fibroblasts

text: sorted Jlat-3T3

text: Homo sapiens/Mus musculus

characteristic: isolate

text: mixed culture

text: replicate 2

text: sorted Jlat-3T3

text: not applicable

text: T cells + Fibroblasts

text: human/mouse mix cell line


text: NIAID, NIH

text: live

text: Model organism or animal

text: not applicable

text: Boritz

text: T cells + Fibroblasts

text: sorted Jlat-3T3

text: Homo sapiens/Mus musculus

text: mixed culture

text: replicate 3

characteristic: replicate

text: sorted Jlat-3T3

text: not applicable

text: T cells + Fibroblasts

text: human/mouse mix cell line


text: NIAID, NIH

text: live

text: Model organism or animal

text: not applicable

text: Boritz

text: T cells + Fibroblasts

text: sorted Jlat-3T3

text: Homo sapiens/Mus musculus

text: mixed culture

text: replicate 4

text: sorted Jlat-3T3

text: not applicable

characteristic: sex

text: T cells + Fibroblasts

text: human/mouse mix cell line


text: NIAID, NIH

text: live

text: Human

text: not applicable

text: Boritz

text: Tcells

text: unsorted Jlat

text: not applicable

text: Homo sapiens

text: replicate 1

text: unsorted Jlat

text: not applicable

text: Tcells

characteristic: tissue

text: human cell line


text: NIAID, NIH

text: live

text: Human

text: not applicable

text: Boritz

text: Tcells

text: unsorted Jlat

text: not applicable

text: Homo sapiens

text: replicate 2

text: unsorted Jlat

text: not applicable

text: Tcells

text: human cell line

characteristic: title


characteristic: External Id

text: NIAID, NIH

text: live

text: Human

text: not applicable

text: Boritz

text: Tcells

text: unsorted Jlat

text: not applicable

text: Homo sapiens

text: replicate 3

text: unsorted Jlat

text: not applicable

text: Tcells

text: human cell line


text: NIAID, NIH

characteristic: INSDC center name

text: live

text: Human

text: not applicable

text: Boritz

text: Bcells

text: unsorted Raji-JLat

text: not applicable

text: Homo sapiens

text: replicate 1

text: unsorted Raji-JLat

text: not applicable

text: Bcells

text: human cell line


text: NIAID, NIH

characteristic: INSDC last update

text: live

text: Human

text: not applicable

text: Boritz

text: Bcells

text: unsorted Raji-JLat

text: not applicable

text: Homo sapiens

text: replicate 2

text: unsorted Raji-JLat

text: not applicable

text: Bcells

text: human cell line


text: NIAID, NIH

text: live

characteristic: INSDC status

text: Human

text: not applicable

text: Boritz

text: Bcells

text: unsorted Raji-JLat

text: not applicable

text: Homo sapiens

text: replicate 3

text: unsorted Raji-JLat

text: not applicable

text: Bcells

text: human cell line


text: NIAID, NIH

text: live

text: Human

characteristic: NCBI submission model

text: not applicable

text: Boritz

text: Tcells +Bcells

text: not applicable

text: Homo sapiens

text: replicate 1

text: not applicable

text: Tcells +Bcells

text: human cell line


text: NIAID, NIH

text: live

text: Human

characteristic: NCBI submission package

text: not applicable

text: Boritz

text: Tcells +Bcells

text: not applicable

text: Homo sapiens

text: replicate 2

text: not applicable

text: Tcells +Bcells

text: human cell line


text: NIAID, NIH

text: live

text: Human

text: not applicable

text: Boritz

text: Tcells +Bcells

text: not applicable

text: Homo sapiens

characteristic: organism

text: replicate 3

text: not applicable

text: Tcells +Bcells

text: human cell line


text: NIAID, NIH

characteristic: INSDC first public

text: live

text: Human

text: not applicable

text: Boritz

text: Tcells +Bcells

text: not applicable

text: Homo sapiens

text: replicate 4

text: not applicable

text: Tcells +Bcells

text: human cell line


text: 1 month

characteristic: Age

text: ClosNEC

characteristic: Cohort

text: Universite Paris Cite

characteristic: INSDC secondary accession

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: Gut microbiota

text: non applicable

text: non applicable

text: France

text: Homo sapiens

characteristic: host

text: feces

text: missing

text: human gut metagenome

text: MIMARKS Survey related sample from human gut metagenome


text: 1 week

text: EPIFLORE

text: Universite Paris Cite

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIMARKS:5.0

characteristic: description

text: Gut microbiota

text: non applicable

text: non applicable

text: France

text: Homo sapiens

text: feces

text: missing

text: human gut metagenome


text: 1 month

text: EPIFLORE

text: Universite Paris Cite

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: Gut microbiota

text: non applicable

text: non applicable

text: France

text: Homo sapiens

text: feces

text: missing

text: human gut metagenome


text: Lorenz Studer, Memorial Sloan Kettering Cancer Center; Weill Graduate School of Medical Sciences of Cornell University

text: live

text: Generic

text: hPSC-derived sacral neural crest cells

characteristic: cell type

text: Homo sapiens

text: Neural crest cells

characteristic: time point

characteristic: treatment


characteristic: External Id

text: live

text: Generic

text: hESC

text: Homo sapiens

text: Neural crest cells

characteristic: title

text: no treatment


text: Baotou Normal College, Inner Mongolia

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: missing

text: Carex pediformis var. pediformis.

text: missing

text: missing

text: root metagenome

text: Carex pediformis var. pediformis.1

characteristic: tmp


text: Baotou Normal College, Inner Mongolia

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: missing

text: Carex pediformis var. pediformis.

text: missing

text: missing

text: root metagenome

text: Carex pediformis var. pediformis.2


text: Baotou Normal College, Inner Mongolia

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: missing

text: Carex pediformis var. pediformis.

text: missing

text: missing

text: root metagenome

characteristic: organism

text: Carex pediformis var. pediformis.3


text: Baotou Normal College, Inner Mongolia

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: missing

text: Carex pediformis var. pediformis.

text: missing

text: missing

text: root metagenome

text: Carex pediformis var. pediformis.4


text: Baotou Normal College, Inner Mongolia

text: live

text: Metagenome or environmental

text: missing

text: Carex pediformis var. pediformis.

characteristic: host

text: missing

text: missing

text: root metagenome

text: Carex pediformis var. pediformis.5


text: Baotou Normal College, Inner Mongolia

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: missing

text: Carex pediformis var. pediformis.

text: missing

text: missing

text: root metagenome

text: Carex pediformis var. pediformis.6


text: Baotou Normal College, Inner Mongolia

text: live

text: Metagenome or environmental

text: missing

text: Carex pediformis var. pediformis.

text: missing

text: missing

text: root metagenome

text: Carex pediformis var. pediformis.7


text: Baotou Normal College, Inner Mongolia

text: live

text: Metagenome or environmental

text: missing

text: Carex pediformis var. pediformis.

text: missing

text: missing

text: root metagenome

text: Carex pediformis var. pediformis.8


text: Baotou Normal College, Inner Mongolia

text: live

text: Metagenome or environmental

text: missing

text: Carex pediformis var. pediformis.

text: missing

text: missing

text: root metagenome

text: Carex pediformis var. pediformis.9


text: Baotou Normal College, Inner Mongolia

text: live

text: Metagenome or environmental

text: missing

text: Carex pediformis var. pediformis.

text: missing

text: missing

text: root metagenome

text: Carex pediformis var. pediformis.10


text: Baotou Normal College, Inner Mongolia

text: live

text: Metagenome or environmental

text: missing

text: Carex pediformis var. pediformis.

text: missing

text: missing

text: root metagenome

text: Carex pediformis var. pediformis.11


text: Baotou Normal College, Inner Mongolia

text: live

text: Metagenome or environmental

text: missing

text: Carex pediformis var. pediformis.

text: missing

text: missing

text: root metagenome

text: Carex pediformis var. pediformis.12


text: Baotou Normal College, Inner Mongolia

text: live

text: Metagenome or environmental

text: missing

text: Carex pediformis var. pediformis.

text: missing

text: missing

text: root metagenome

text: Carex pediformis var. pediformis.13


text: Baotou Normal College, Inner Mongolia

text: live

text: Metagenome or environmental

text: missing

text: Carex pediformis var. pediformis.

text: missing

text: missing

text: root metagenome

text: Carex pediformis var. pediformis.14


text: Baotou Normal College, Inner Mongolia

text: live

text: Metagenome or environmental

text: missing

text: Koenigia divaricata

text: missing

text: missing

text: root metagenome

text: Polygonum divaricatum L.1


text: Baotou Normal College, Inner Mongolia

text: live

text: Metagenome or environmental

text: missing

text: Koenigia divaricata

text: missing

text: missing

text: root metagenome

text: Polygonum divaricatum L.2


text: Baotou Normal College, Inner Mongolia

text: live

text: Metagenome or environmental

text: missing

text: Koenigia divaricata

text: missing

text: missing

text: root metagenome

text: Polygonum divaricatum L.3


text: Baotou Normal College, Inner Mongolia

text: live

text: Metagenome or environmental

text: missing

text: Koenigia divaricata

text: missing

text: missing

text: root metagenome

text: Polygonum divaricatum L.4


text: Baotou Normal College, Inner Mongolia

text: live

text: Metagenome or environmental

text: missing

text: Koenigia divaricata

text: missing

text: missing

text: root metagenome

text: Polygonum divaricatum L.5


text: Baotou Normal College, Inner Mongolia

text: live

text: Metagenome or environmental

text: missing

text: Koenigia divaricata

text: missing

text: missing

text: root metagenome

text: Polygonum divaricatum L.6


text: Baotou Normal College, Inner Mongolia

text: live

text: Metagenome or environmental

text: missing

text: Koenigia divaricata

text: missing

text: missing

text: root metagenome

text: Polygonum divaricatum L.7


text: Baotou Normal College, Inner Mongolia

text: live

text: Metagenome or environmental

text: missing

text: Koenigia divaricata

text: missing

text: missing

text: root metagenome

text: Polygonum divaricatum L.8


text: Baotou Normal College, Inner Mongolia

text: live

text: Metagenome or environmental

text: missing

text: Koenigia divaricata

text: missing

text: missing

text: root metagenome

text: Polygonum divaricatum L.9


text: South China Agricultural University

text: live

text: Pathogen.cl

text: Chong Chen

text: China: Qinghai

text: Migratory bird

text: Not collected

text: feces

text: 36.47 N 100.16 E

text: Acinetobacter indicus

characteristic: strain

text: Pathogen: clinical or host-associated sample from Acinetobacter indicus


text: South China Agricultural University

text: live

text: Pathogen.cl

text: Chong Chen

text: China: Guangdong

text: Homo sapiens

text: Not collected

text: urine

text: 23.12 N 114.42 E

text: Acinetobacter pseudolwoffii

text: Pathogen: clinical or host-associated sample from Acinetobacter pseudolwoffii


text: jining medical university

text: live

text: Metagenome or environmental

text: China:jining

text: feces

text: Not collected

text: mouse metagenome

text: replicate = biological replicate 1

characteristic: replicate


text: jining medical university

text: live

text: Metagenome or environmental

text: China:jining

text: feces

text: Not collected

text: mouse metagenome

text: replicate = biological replicate 2


text: jining medical university

text: live

text: Metagenome or environmental

text: China:jining

text: feces

text: Not collected

text: mouse metagenome

text: replicate = biological replicate 3


text: jining medical university

text: live

text: Metagenome or environmental

text: China:jining

text: feces

text: Not collected

text: mouse metagenome

text: replicate = biological replicate 4


text: jining medical university

text: live

text: Metagenome or environmental

text: China:jining

text: feces

text: Not collected

text: mouse metagenome

text: replicate = biological replicate 5


text: jining medical university

text: live

text: Metagenome or environmental

text: China:jining

text: feces

text: Not collected

text: mouse metagenome

text: replicate = biological replicate 6


text: jining medical university

text: live

text: Metagenome or environmental

text: China:jining

text: feces

text: Not collected

text: mouse metagenome

text: replicate = biological replicate 7


text: New York State GenomeTrakr

text: live

text: Pathogen.env

text: New York State Department of Health

characteristic: collected by

characteristic: collection date

text: USA:NY

characteristic: geo loc name

text: milk

characteristic: isolation source

text: Yersinia enterocolitica

text: GenomeTrakr; LFFM-FY2

characteristic: project name

text: New York State Department of Health

text: food

text: Pathogen: environmental/food/other sample from Yersinia enterocolitica


characteristic: External Id

text: New York State GenomeTrakr

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Pathogen.env

text: New York State Department of Health

text: USA:NY

text: turkey sandwich

text: Yersinia enterocolitica

text: GenomeTrakr; LFFM-FY2

text: New York State Department of Health

text: food

characteristic: title


text: New York State GenomeTrakr

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: New York State Department of Health

text: USA:NY

text: white tail deer

text: Yersinia enterocolitica

text: GenomeTrakr; LFFM-FY2

text: New York State Department of Health

text: animal


text: New York State GenomeTrakr

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

text: New York State Department of Health

text: USA:NY

text: deer

text: Yersinia enterocolitica

characteristic: organism

text: GenomeTrakr; LFFM-FY2

text: New York State Department of Health

text: animal


text: New York State GenomeTrakr

text: live

text: Pathogen.cl

characteristic: SRA accession

text: New York State Department of Health

text: USA:NY

text: Homo sapiens

characteristic: host

text: stool

text: Yersinia enterocolitica

text: GenomeTrakr; LFFM-FY2

text: New York State Department of Health

text: human

characteristic: strain

text: Pathogen: clinical or host-associated sample from Yersinia enterocolitica


text: Wadsworth Center NYSDOH

text: live

text: Pathogen.cl

text: New York State Department of Health

characteristic: collected by

characteristic: collection date

text: USA:NY

text: Homo sapiens

text: stool

text: Clostridioides difficile

text: New York State Department of Health

text: human

text: Pathogen: clinical or host-associated sample from Clostridioides difficile


text: Algoma University

text: live

text: MIMARKS.survey

text: 0-10 cm

characteristic: depth

text: Keywords: GSC:MIxS;MIMARKS:5.0

characteristic: description

characteristic: elev

text: mixed forest biome

text: mixed forest biome

text: soil

text: Canada: Sault Ste. Marie

text: 46.5465 N 84.4556 W

text: soil metagenome


characteristic: External Id

text: Tufts University

characteristic: INSDC center name

text: live

text: Pathogen.cl

text: PRISMA

text: Peru: Lima

text: Homo sapiens

text: healthy

characteristic: isolate

text: stool

text: 12.2241 S 76.9528 W

text: Escherichia coli

text: Pathogen: clinical or host-associated sample from Escherichia coli


text: Xijing Hospital,The Fourth Military Medical University

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Human

text: missing

characteristic: age

text: missing

text: Hypertrophic scar-derived fibroblasts cultured in DMEM medium containing 10% FBS for 24 h replicate 1

text: missing

text: Homo sapiens

text: missing

characteristic: sex

text: missing

characteristic: tissue

text: control replicate 1

characteristic: title

characteristic: treatment


characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Human

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: missing

text: missing

text: Hypertrophic scar-derived fibroblasts cultured in DMEM medium containing 10% FBS for 24 h replicate 2

text: missing

text: Homo sapiens

characteristic: organism

text: missing

text: missing

text: control replicate 2


text: live

text: Human

text: missing

text: missing

text: Hypertrophic scar-derived fibroblasts cultured in DMEM medium containing 10% FBS for 24 h replicate 3

characteristic: description

text: missing

text: Homo sapiens

text: missing

text: missing

text: control replicate 3


characteristic: External Id

text: live

text: Human

text: missing

text: missing

text: Hypertrophic scar-derived fibroblasts cultured in DMEM medium containing 10% FBS and 10 μg/ml APN for 24 h replicate 1

text: missing

text: Homo sapiens

text: missing

text: missing

text: APN replicate 1


characteristic: INSDC center name

text: live

text: Human

text: missing

text: missing

text: Hypertrophic scar-derived fibroblasts cultured in DMEM medium containing 10% FBS and 10 μg/ml APN for 24 h replicate 2

text: missing

text: Homo sapiens

text: missing

text: missing

text: APN replicate 2


text: live

text: Human

text: missing

text: missing

text: Hypertrophic scar-derived fibroblasts cultured in DMEM medium containing 10% FBS and 10 μg/ml APN for 24 h replicate 3

text: missing

characteristic: isolate

text: Homo sapiens

text: missing

text: missing

text: APN replicate 3


text: Cancer Therapeutics Program, Ottawa Hospital Research Institute

characteristic: INSDC last update

text: live

text: Generic

text: Aged, Young

text: Mus musculus

text: Ovary

characteristic: strain

text: Ovary

text: Ovaries, poolC

text: metformin


text: live

characteristic: INSDC status

text: Generic

text: Aged, Young

characteristic: age

text: Mus musculus

text: Ovary

text: Ovary

text: Ovaries, poolB

text: metformin


text: live

text: Generic

text: Aged, Young

text: Mus musculus

text: Ovary

text: Ovary

characteristic: tissue

text: Ovaries, poolA

text: metformin


text: Southwest University

text: live

text: Plant

text: not collected

text: China: SiChuan

text: not collected

text: Citrus sinensis

text: replicate = biological replicate 1

characteristic: replicate

text: Leaves

text: Plant sample from Citrus sinensis

characteristic: title


text: Southwest University

characteristic: INSDC first public

text: live

text: Plant

text: not collected

text: China: SiChuan

text: not collected

text: Citrus sinensis

text: replicate = biological replicate 2

text: Leaves

text: Plant sample from Citrus sinensis


text: Southwest University

text: live

text: Plant

text: not collected

text: China: SiChuan

text: not collected

text: Citrus sinensis

text: replicate = biological replicate 3

text: Leaves

text: Plant sample from Citrus sinensis


text: Southwest University

text: live

text: Plant

text: not collected

text: China: SiChuan

text: not collected

text: Citrus sinensis

text: replicate = biological replicate 4

text: Leaves

text: Plant sample from Citrus sinensis


text: Southwest University

text: live

text: Plant

text: not collected

text: China: SiChuan

text: not collected

text: Citrus sinensis

text: replicate = biological replicate 5

text: Leaves

text: Plant sample from Citrus sinensis


text: Southwest University

text: live

text: Plant

text: not collected

text: China: SiChuan

text: not collected

text: Citrus sinensis

text: replicate = biological replicate 6

text: Leaves

text: Plant sample from Citrus sinensis


text: Southwest University

text: live

text: Plant

text: not collected

text: China: SiChuan

text: not collected

text: Citrus sinensis

text: replicate = biological replicate 7

text: Leaves

text: Plant sample from Citrus sinensis


text: Southwest University

text: live

text: Plant

text: not collected

text: China: SiChuan

text: not collected

text: Citrus sinensis

text: replicate = biological replicate 8

text: Leaves

text: Plant sample from Citrus sinensis


text: Southwest University

text: live

text: Plant

text: not collected

text: China: SiChuan

text: not collected

text: Citrus sinensis

text: replicate = biological replicate 9

text: Leaves

text: Plant sample from Citrus sinensis


text: Southwest University

text: live

text: Plant

text: not collected

text: China: SiChuan

text: not collected

text: Citrus sinensis

text: replicate = biological replicate 10

text: Leaves

text: Plant sample from Citrus sinensis


text: Southwest University

text: live

text: Plant

text: not collected

text: China: SiChuan

text: not collected

text: Citrus sinensis

text: replicate = biological replicate 11

text: Leaves

text: Plant sample from Citrus sinensis


text: Southwest University

text: live

text: Plant

text: not collected

text: China: SiChuan

text: not collected

text: Citrus sinensis

text: replicate = biological replicate 12

text: Leaves

text: Plant sample from Citrus sinensis


text: Department of Molecular regulation of Inflammatory and Immune Diseases, Tokyo University of Science

characteristic: INSDC secondary accession

text: live

text: Generic

text: 8 week old

text: WT

characteristic: genotype

text: Mus musculus

text: lung

text: lung

text: murine adult lung replicate1


text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 8 week old

text: WT

text: Mus musculus

text: lung

text: lung

text: murine adult lung replicate2


text: live

text: Generic

characteristic: SRA accession

text: 8 week old

text: WT

text: Mus musculus

characteristic: organism

text: lung

text: lung

text: murine adult lung replicate3


characteristic: External Id

text: live

text: Generic

text: 8 week old

text: WT

text: Mus musculus

text: spleen

text: spleen

text: murine adult splenocytes replicate1


characteristic: INSDC center name

text: live

text: Generic

text: 8 week old

text: WT

text: Mus musculus

text: spleen

text: spleen

text: murine adult splenocytes replicate2


text: live

text: Generic

text: 8 week old

text: WT

text: Mus musculus

text: spleen

text: spleen

text: murine adult splenocytes replicate3


text: live

text: Generic

text: 8 week old

text: WT

text: Mus musculus

text: spleen

text: spleen

text: murine adult splenocytes replicate1 BD WTA kit


text: live

text: Generic

text: 8 week old

text: WT

text: Mus musculus

text: spleen

text: spleen

text: murine adult splenocytes replicate2 BD WTA kit


text: live

text: Generic

text: 8 week old

text: WT

text: Mus musculus

text: spleen

text: spleen

text: murine adult splenocytes replicate3 BD WTA kit


text: live

text: Generic

text: 8 week old

text: WT

text: Mus musculus

text: kidney

text: kidney

text: murine adult kidney replicate1


text: FDA CVM NARMS-North Carolina State University

text: live

text: Pathogen.env

text: animal

characteristic: SourceType

text: NCSU CVM Thakur Lab

characteristic: collected by

characteristic: collection date

text: USA:NC

characteristic: geo loc name

text: chicken breast

characteristic: isolation source

text: Salmonella enterica

text: Pathogen: environmental/food/other sample from Salmonella enterica


characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: animal

text: NCSU CVM Thakur Lab

text: USA:NC

text: Chicken Thighs

text: Salmonella enterica

characteristic: strain


characteristic: INSDC first public

text: live

text: Pathogen.env

text: animal

text: NCSU CVM Thakur Lab

text: USA:NC

text: ground turkey

text: Salmonella enterica

characteristic: title


characteristic: INSDC secondary accession

text: live

text: Pathogen.env

text: animal

text: NCSU CVM Thakur Lab

text: USA:NC

text: Chicken Leg

text: Salmonella enterica


text: live

text: Pathogen.env

characteristic: NCBI submission model

text: animal

text: NCSU CVM Thakur Lab

text: USA:NC

text: chicken breast

text: Escherichia coli

text: Pathogen: environmental/food/other sample from Escherichia coli


text: live

text: Pathogen.env

characteristic: NCBI submission package

text: animal

text: NCSU CVM Thakur Lab

text: USA:NC

text: ground turkey

text: Escherichia coli


text: live

text: Pathogen.env

text: animal

text: NCSU CVM Thakur Lab

text: USA:NC

text: ground turkey

text: Escherichia coli


text: live

text: Pathogen.env

characteristic: SRA accession

text: animal

text: NCSU CVM Thakur Lab

text: USA:NC

text: Ground Pork

text: Escherichia coli


text: live

text: Pathogen.env

text: animal

text: NCSU CVM Thakur Lab

text: USA:NC

text: Chicken Wings

text: Escherichia coli

characteristic: organism


characteristic: External Id

text: live

text: Pathogen.env

text: animal

text: NCSU CVM Thakur Lab

text: USA:NC

text: Ground Pork

text: Escherichia coli


text: NYSDOH Wadsworth Center Bacteriology Laboratory WGS Group

characteristic: INSDC center name

text: live

text: Pathogen.cl

text: New York State Department of Health

text: USA:NY

text: Homo sapiens

characteristic: host

text: stool

text: Escherichia coli O157:H7

text: New York State Department of Health

text: human

text: Pathogen: clinical or host-associated sample from Escherichia coli O157:H7


text: live

text: Pathogen.cl

text: New York State Department of Health

text: USA:NY

text: Homo sapiens

text: missing

text: stool

text: missing

text: Escherichia coli

text: New York State Department of Health

text: human

text: Pathogen: clinical or host-associated sample from Escherichia coli


text: live

text: Pathogen.cl

text: New York State Department of Health

characteristic: collected by

text: USA:NY

text: Homo sapiens

text: stool

text: Escherichia coli O21:H2

text: New York State Department of Health

text: human

text: Pathogen: clinical or host-associated sample from Escherichia coli O21:H2


text: Wadsworth Center NYSDOH

text: live

text: Pathogen.cl

text: New York State Department of Health

characteristic: collection date

text: USA:NY

text: Homo sapiens

text: stool

text: Clostridioides difficile

text: New York State Department of Health

text: human

text: Pathogen: clinical or host-associated sample from Clostridioides difficile


Initial infection repeat 1

characteristic: ID

text: Institute of hydrobiology, Chinese academy of sciences

text: live

text: Pathogen.env

text: Center for Microalgal Biotechnology and Biofuels, Institute of Hydrobiology, Chinese Academy of Sciences

text: Initial infection repeat 1

characteristic: description

text: China

text: CMBB

characteristic: isolate

text: From Haematococcus pluvialis cultures

text: 30.55 N 114.36 E

text: Paraphysoderma sedebokerense

text: Pathogen: environmental/food/other sample from Paraphysoderma sedebokerense


Initial infection repeat 2

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: Initial infection repeat 2

text: China

text: CMBB

text: From Haematococcus pluvialis cultures

text: 30.55 N 114.36 E

text: Paraphysoderma sedebokerense


Initial infection repeat 3

characteristic: INSDC first public

text: live

text: Pathogen.env

text: Initial infection repeat 3

text: China

text: CMBB

text: From Haematococcus pluvialis cultures

text: 30.55 N 114.36 E

text: Paraphysoderma sedebokerense


Initial infection repeat 4

text: live

text: Pathogen.env

text: Initial infection repeat 4

text: China

text: CMBB

text: From Haematococcus pluvialis cultures

text: 30.55 N 114.36 E

text: Paraphysoderma sedebokerense

characteristic: title