text: Gujarat Biotechnology Research Centre

text: live

text: SARS-CoV-2: clinical or host-associated

text: AmpliGene laboratory, Ahmedabad

text: India: Gandhinagar, Gujarat

text: Homo sapiens

text: Nasopharyngeal and Oropharyngeal


status: PUBLIC

characteristic: External Id

text: Gujarat Biotechnology Research Centre

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Cellcare Patholab, Ahmedabad

tag: attribute

text: India: Ahmedabad, Gujarat

text: Homo sapiens

characteristic: host

characteristic: isolate

text: Nasopharyngeal and Oropharyngeal

characteristic: organism

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2

characteristic: title


text: Gujarat Biotechnology Research Centre

text: live

text: SARS-CoV-2: clinical or host-associated

text: Cellcare Patholab, Ahmedabad

text: India: Ahmedabad, Gujarat

text: Homo sapiens

text: Nasopharyngeal and Oropharyngeal

text: Severe acute respiratory syndrome coronavirus 2


text: Gujarat Biotechnology Research Centre

text: live

text: SARS-CoV-2: clinical or host-associated

text: GMERS Medical College, Junagadh

text: India: Junagadh, Gujarat

text: Homo sapiens

text: Nasopharyngeal and Oropharyngeal


text: Gujarat Biotechnology Research Centre

text: live

text: SARS-CoV-2: clinical or host-associated

text: Pangenomics International Pvt. Ltd, Ahmedabad

text: India: Ahmedabad, Gujarat

text: Homo sapiens

text: Nasopharyngeal and Oropharyngeal


text: Gujarat Biotechnology Research Centre

text: live

text: SARS-CoV-2: clinical or host-associated

text: India: Gandhinagar, Gujarat

text: Homo sapiens

text: Nasopharyngeal and Oropharyngeal


text: Gujarat Biotechnology Research Centre

text: live

text: SARS-CoV-2: clinical or host-associated

text: India: Sabarkantha, Gujarat

text: Homo sapiens

text: Nasopharyngeal and Oropharyngeal


text: Gujarat Biotechnology Research Centre

text: live

text: SARS-CoV-2: clinical or host-associated

text: Unipeth Pathology Laboratory -Vadodara

text: India: Vadodara, Gujarat

text: Homo sapiens

text: Nasopharyngeal and Oropharyngeal


text: Gujarat Biotechnology Research Centre

text: live

text: SARS-CoV-2: clinical or host-associated

text: Government Medical College, Surat

text: India: Surat, Gujarat

text: Homo sapiens

text: Nasopharyngeal and Oropharyngeal


text: Gujarat Biotechnology Research Centre

text: live

text: SARS-CoV-2: clinical or host-associated

text: Gujarat Pathology laboratory & Diagnostic Center,

text: India: Ahmedabad, Gujarat

text: Homo sapiens

text: Nasopharyngeal and Oropharyngeal


text: Gujarat Biotechnology Research Centre

text: live

text: SARS-CoV-2: clinical or host-associated

text: Unipath Speciality Laboaratory, Ahmedabad

text: India: Vadodara, Gujarat

text: Homo sapiens

text: Nasopharyngeal and Oropharyngeal


text: Gujarat Biotechnology Research Centre

text: live

text: SARS-CoV-2: clinical or host-associated

text: India: Junagadh, Gujarat

text: Homo sapiens

text: Nasopharyngeal and Oropharyngeal


text: Gujarat Biotechnology Research Centre

text: live

text: SARS-CoV-2: clinical or host-associated

text: Scientific Diagnostic Center Pvt.Ltd, Ahmedabad

text: India: Ahmedabad, Gujarat

text: Homo sapiens

text: Nasopharyngeal and Oropharyngeal


text: Gujarat Biotechnology Research Centre

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterling Accurish Vadodara

text: India: Vadodara, Gujarat

text: Homo sapiens

text: Nasopharyngeal and Oropharyngeal


text: Gujarat Biotechnology Research Centre

text: live

text: SARS-CoV-2: clinical or host-associated

text: India: Ahmedabad, Gujarat

text: Homo sapiens

text: Nasopharyngeal and Oropharyngeal


text: Gujarat Biotechnology Research Centre

text: live

text: SARS-CoV-2: clinical or host-associated

text: Green Cross Genetics Lab Pvt Ltd, Ahmedabad

text: India: Ahmedabad, Gujarat

text: Homo sapiens

text: Nasopharyngeal and Oropharyngeal


text: Gujarat Biotechnology Research Centre

text: live

text: SARS-CoV-2: clinical or host-associated

text: Green Cross Pathology Laboratory, Navrangpura, Ahm

text: India: Ahmedabad, Gujarat

text: Homo sapiens

text: Nasopharyngeal and Oropharyngeal


text: Gujarat Biotechnology Research Centre

text: live

text: SARS-CoV-2: clinical or host-associated

text: APRL Pathlabs - Vadodara

text: India: Vadodara, Gujarat

text: Homo sapiens

text: Nasopharyngeal and Oropharyngeal


text: Gujarat Biotechnology Research Centre

text: live

text: SARS-CoV-2: clinical or host-associated

text: GMERS Medical College, Sola, Ahemdabad

text: India: Ahmedabad, Gujarat

text: Homo sapiens

text: Nasopharyngeal and Oropharyngeal


text: Gujarat Biotechnology Research Centre

text: live

text: SARS-CoV-2: clinical or host-associated

text: Pathocare Pathology Laboratory, Vadodara

text: India: Vadodara, Gujarat

text: Homo sapiens

text: Nasopharyngeal and Oropharyngeal


text: Gujarat Biotechnology Research Centre

text: live

text: SARS-CoV-2: clinical or host-associated

text: SSG Hospital Vadodara

text: India: Vadodara, Gujarat

text: Homo sapiens

text: Nasopharyngeal and Oropharyngeal


text: Tsinghua university

text: live

text: MIMARKS.survey

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMARKS:5.0

characteristic: description

text: not collected

text: fermentation reactor

text: fermentation broth

text: China: Beijing

text: food waste

text: food waste

text: not collected

text: food fermentation metagenome

text: MIMARKS Survey related sample from food fermentation metagenome


text: Sichuan University

text: live

text: Metagenome or environmental

text: China:SiChuan

text: missing

text: missing

text: 28.20 N 105.11 E

text: soil metagenome

text: Metagenome or environmental sample from soil metagenome


text: SARS-CoV-2/Human/USA/WV-CDC-STM-BX4N6BPWD/2022

text: CDC-OAMD

text: live

characteristic: Isolate

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: West Virginia

text: Homo sapiens

text: White

text: male

text: nasal swab

characteristic: lineage/clade name

text: baseline surveillance (random sampling)

text: CDC Sars CoV2 Sequencing Baseline Constellation


text: SARS-CoV-2/Human/USA/WV-CDC-STM-8VJ99W5XV/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: West Virginia

text: Homo sapiens

text: White

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/TX-CDC-STM-YT5B2SH6K/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Texas

text: Homo sapiens

text: Asian

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/TX-CDC-STM-SHV58AUUX/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Texas

text: Homo sapiens

text: White

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/TX-CDC-STM-KQAQASQ3S/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Texas

text: Homo sapiens

text: Other Race

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/TX-CDC-STM-9EFPRN5WC/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Texas

text: Homo sapiens

text: Other Race

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/TX-CDC-STM-92QTUBQ7J/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Texas

text: Homo sapiens

text: White

text: male

text: nasal swab

text: Severe acute respiratory syndrome coronavirus 2

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/TX-CDC-STM-7VEK6SMTC/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Texas

text: Homo sapiens

text: Black or African American

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/TX-CDC-STM-5WKNTCS6W/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Texas

text: Homo sapiens

text: Other Race

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/TX-CDC-STM-3CTHV5SAV/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Texas

text: Homo sapiens

text: Black or African American

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/SC-CDC-STM-S684552YV/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: South Carolina

text: Homo sapiens

text: White

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/PA-CDC-STM-RAD5CTGUB/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Pennsylvania

text: Homo sapiens

text: White

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/PA-CDC-STM-K5B8MJMSD/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Pennsylvania

text: Homo sapiens

text: White

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/PA-CDC-STM-E7A2EPFGP/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Pennsylvania

text: Homo sapiens

text: White

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/PA-CDC-STM-7NC9HEZ7F/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Pennsylvania

text: Homo sapiens

text: White

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/NY-CDC-STM-5Q32KCRF9/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: New York

text: Homo sapiens

text: Not sure

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/NJ-CDC-STM-PP896MGUP/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: New Jersey

text: Homo sapiens

text: White

text: male

text: nasal swab

text: baseline surveillance (random sampling)

text: CDC Sars CoV2 Sequencing Baseline Constellation


text: SARS-CoV-2/Human/USA/NC-CDC-STM-2U8F87D32/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: North Carolina

text: Homo sapiens

text: Black or African American

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/MN-CDC-STM-5J6ZCJA2X/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Minnesota

text: Homo sapiens

text: White

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/MI-CDC-STM-US3TRB495/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Michigan

text: Homo sapiens

text: White

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/MI-CDC-STM-J4YMZNE3V/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Michigan

text: Homo sapiens

text: White

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/LA-CDC-STM-SPQTDFURM/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Louisiana

text: Homo sapiens

text: Black or African American

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/LA-CDC-STM-CPDW775DE/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Louisiana

text: Homo sapiens

text: White

text: male

text: nasal swab

text: Severe acute respiratory syndrome coronavirus 2

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/LA-CDC-STM-AMFVBJ6RY/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Louisiana

text: Homo sapiens

text: Other Race

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/LA-CDC-STM-2ACDEC6V4/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Louisiana

text: Homo sapiens

text: White

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/KY-CDC-STM-FDGMBANJX/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Kentucky

text: Homo sapiens

text: White

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/IN-CDC-STM-U3EA6SBW9/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Indiana

text: Homo sapiens

text: Other Race

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/IN-CDC-STM-KUX5NSFRX/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Indiana

text: Homo sapiens

text: White

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/IN-CDC-STM-KPTB9HKTG/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Indiana

text: Homo sapiens

text: White

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/IN-CDC-STM-HX9CS6C9Z/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Indiana

text: Homo sapiens

text: Not sure

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/IN-CDC-STM-F6BXDHD4J/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Indiana

text: Homo sapiens

text: White

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/IL-CDC-STM-ZG97C5PNG/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Illinois

text: Homo sapiens

text: White

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/IL-CDC-STM-YJ7376NTP/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Illinois

text: Homo sapiens

text: Other Race

text: female

text: nasal swab

text: baseline surveillance (random sampling)

text: CDC Sars CoV2 Sequencing Baseline Constellation


text: SARS-CoV-2/Human/USA/IL-CDC-STM-RZ2VAG6WZ/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Illinois

text: Homo sapiens

text: White

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/IL-CDC-STM-KXD385PNM/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Illinois

text: Homo sapiens

text: White

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/IL-CDC-STM-H36K3V94J/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Illinois

text: Homo sapiens

text: White

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/IL-CDC-STM-GWW6X33TT/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Illinois

text: Homo sapiens

text: White

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/IL-CDC-STM-A2W4JW3G9/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Illinois

text: Homo sapiens

text: White

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/IL-CDC-STM-7P9D2JABD/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Illinois

text: Homo sapiens

text: Asian

text: male

text: nasal swab

text: Severe acute respiratory syndrome coronavirus 2

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/IL-CDC-STM-7CEKGMZ85/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Illinois

text: Homo sapiens

text: White

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/IL-CDC-STM-49G6ZKKSB/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Illinois

text: Homo sapiens

text: White

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/IL-CDC-STM-3UUPJN2PC/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Illinois

text: Homo sapiens

text: White

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/IA-CDC-STM-4X663NK52/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Iowa

text: Homo sapiens

text: Asian

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/GA-CDC-STM-WY57WGNXD/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Georgia

text: Homo sapiens

text: Other Race

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/GA-CDC-STM-SWDDJP6UR/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Georgia

text: Homo sapiens

text: White

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/GA-CDC-STM-NCCTR2HTU/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Georgia

text: Homo sapiens

text: White

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/GA-CDC-STM-HCC9VBYVN/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Georgia

text: Homo sapiens

text: Black or African American

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/GA-CDC-STM-GQC95ABMU/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Georgia

text: Homo sapiens

text: White

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/GA-CDC-STM-BGZ55NEVV/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Georgia

text: Homo sapiens

text: White

text: male

text: nasal swab

text: baseline surveillance (random sampling)

text: CDC Sars CoV2 Sequencing Baseline Constellation


text: SARS-CoV-2/Human/USA/GA-CDC-STM-83KMWX8KY/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Georgia

text: Homo sapiens

text: Not sure

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/GA-CDC-STM-7BBG92CUK/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Georgia

text: Homo sapiens

text: Other Race

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/GA-CDC-STM-646TKWJGH/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Georgia

text: Homo sapiens

text: Other Race

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/FL-CDC-STM-RAAP3KQR6/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Florida

text: Homo sapiens

text: White

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/FL-CDC-STM-JY2SYP8Z7/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Florida

text: Homo sapiens

text: Black or African American

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/FL-CDC-STM-FHKWZ4QG6/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Florida

text: Homo sapiens

text: Black or African American

text: female

text: nasal swab

text: Severe acute respiratory syndrome coronavirus 2

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/FL-CDC-STM-B4CWTHMX2/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Florida

text: Homo sapiens

text: White

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/FL-CDC-STM-844RGFQ3J/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Florida

text: Homo sapiens

text: White

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/FL-CDC-STM-7E2N7V7UT/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Florida

text: Homo sapiens

text: Other Race

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/FL-CDC-STM-3D8FP3GGJ/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Florida

text: Homo sapiens

text: White

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-XDC8SJSM7/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: White

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-WFDSZE7H9/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: Asian

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-VRJXUSC2Z/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: Asian

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-UAKS5K4JY/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: Other Race

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-TUCA4Q3U2/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: Black or African American

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-TGDYCNFJN/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: Not sure

text: female

text: nasal swab

text: baseline surveillance (random sampling)

text: CDC Sars CoV2 Sequencing Baseline Constellation


text: SARS-CoV-2/Human/USA/CA-CDC-STM-S9T3XM5D9/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: Asian

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-RRWTD5BDP/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: White

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-QNRGCAKRC/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: Asian

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-PVADKWWXC/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: Black or African American

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-MCD66BVU8/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: White

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-J4ERWNJSM/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: Asian

text: male

text: nasal swab

text: Severe acute respiratory syndrome coronavirus 2

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-HFDJTFTUW/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: White

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-H39RH7ZMU/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: Asian

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-GNHHQVZH7/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: White

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-ETJH97SXW/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: Not sure

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-EE9V9XA9F/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: Asian

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-DSBZMSCSR/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: White

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-DQ8FQC6KY/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: Not sure

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-DMHJWMUNW/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: Other Race

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-DBSKP7FYP/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: Other Race

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-CATW4Y6TU/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: Other Race

text: female

text: nasal swab

text: baseline surveillance (random sampling)

text: CDC Sars CoV2 Sequencing Baseline Constellation


text: SARS-CoV-2/Human/USA/CA-CDC-STM-AZSKPXA52/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: White

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-8QM4Z7JPG/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: Asian

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-7V6RZDQD5/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: Other Race

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-7H6T8XU3K/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: White

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-6UE5XPQXH/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: Other Race

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-6BBPU2GX7/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: White

text: male

text: nasal swab

text: Severe acute respiratory syndrome coronavirus 2

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-4Z6B76M2N/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: Not sure

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-3PJVKCATB/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: White

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-STM-22665QEBN/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: California

text: Homo sapiens

text: Asian

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/AZ-CDC-STM-QBKT6HRZ5/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Arizona

text: Homo sapiens

text: Other Race

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/AZ-CDC-STM-FJTHA9D6E/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Arizona

text: Homo sapiens

text: Not sure

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/AZ-CDC-STM-BC6MXF6UB/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Arizona

text: Homo sapiens

text: Other Race

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/AL-CDC-STM-WFEARKNYF/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Alabama

text: Homo sapiens

text: Black or African American

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/AL-CDC-STM-U452QRVGE/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Alabama

text: Homo sapiens

text: Not sure

text: male

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/AL-CDC-STM-FF2582JRJ/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Alabama

text: Homo sapiens

text: White

text: female

text: nasal swab

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/AL-CDC-STM-BR9UK59SG/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: 'Helix'

text: Nasal swab

text: Nasal swab

text: N

text: S

text: Unknown

text: Unknown

text: Unknown

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: Helix COVID-19 and Flu Test

text: USA: Alabama

text: Homo sapiens

text: Asian

text: female

text: nasal swab

text: baseline surveillance (random sampling)

text: CDC Sars CoV2 Sequencing Baseline Constellation


text: Kyung Hee University

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.human-oral

text: Keywords: GSC:MIxS;MIGS:5.0

text: human-associated habitat

text: oral cavity

text: subgingival plaque

text: South Korea: Seoul

text: Homo sapiens

text: ATCC medium 416

text: 37.59 N 127.05 E

text: Limosilactobacillus fermentum

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Limosilactobacillus fermentum


characteristic: External Id

text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Clinical Lab, Aga Khan University Hospital

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-44514-S1/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)

text: Infectious Diseases Research Laboratory, Department of Pediatrics and Child Health, Faculty of Health Sciences, Medical College, The Aga Khan University, Stadium Road, Karachi-74800, Pakistan

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: The Aga Khan University

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-45814-S2/2022

text: Homo sapiens

text: nasopharynx

text: raised D-dimer & homocysteine

text: female

text: nasal swab

text: Severe acute respiratory syndrome coronavirus 2

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-45825-S9/2022

text: Homo sapiens

text: nasopharynx

text: Reinfection

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-46063-S4/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-46065-S3/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-46195-S10/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-46427-S14/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-46468-S11/2022

text: Homo sapiens

text: nasopharynx

text: Covid test not found

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-46518-S5/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-46566-S6/2022

text: Homo sapiens

characteristic: host

text: nasopharynx

text: raised D-dimer, WBCs, ESR & CRP

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-46567-S7/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: female

characteristic: isolate

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-46616-S8/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: female

text: nasal swab

characteristic: organism

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-47383-S16/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)

characteristic: title


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Clinical Lab, Aga Khan University Hospital

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-47456-S15/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-48467-S17/2022

text: Homo sapiens

text: nasopharynx

text: raised SGPT & neutrophils

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)

text: Infectious Diseases Research Laboratory, Department of Pediatrics and Child Health, Faculty of Health Sciences, Medical College, The Aga Khan University, Stadium Road, Karachi-74800, Pakistan


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-48500-S18/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-49075-S19/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: male

text: nasal swab

text: Severe acute respiratory syndrome coronavirus 2

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-51494-S20/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-52482-S21/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-57989-S25/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-58078-S24/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-62784-S1/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-62911-S2/2022

text: Homo sapiens

text: nasopharynx

text: Viral fever

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-62916-S4/2022

text: Homo sapiens

text: nasopharynx

text: raised ESR

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-62983-S3/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63039-S6/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Clinical Lab, Aga Khan University Hospital

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63056-S5/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63060-S7/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63151-S9/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)

text: Infectious Diseases Research Laboratory, Department of Pediatrics and Child Health, Faculty of Health Sciences, Medical College, The Aga Khan University, Stadium Road, Karachi-74800, Pakistan


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63167-S8/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63198-S11/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: male

text: nasal swab

text: Severe acute respiratory syndrome coronavirus 2

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63224-S10/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63233-S13/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63249-S12/2022

text: Homo sapiens

text: nasopharynx

text: Has Hypertension, Ishemic heart disease, Atrial Fibrillation, Admitted at the hospital for 01 day with COVID pneumonia

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63257-S15/2022

text: Homo sapiens

text: nasopharynx

text: Has Diabetes, Ischemic Heart Disease, Hypothyroidism

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63268-S14/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63308-S17/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Clinical Lab, Aga Khan University Hospital

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63311-S18/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63316-S16/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63405-S20/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63409-S21/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)

text: Infectious Diseases Research Laboratory, Department of Pediatrics and Child Health, Faculty of Health Sciences, Medical College, The Aga Khan University, Stadium Road, Karachi-74800, Pakistan


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63411-S22/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63426-S19/2022

text: Homo sapiens

text: nasopharynx

text: Has Rheumatoid Arthritis, Anemia, decreases Creatinine, raised CRP

text: female

text: nasal swab

text: Severe acute respiratory syndrome coronavirus 2

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63441-S23/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63454-S24/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63702-S1/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63724-S2/2022

text: Homo sapiens

text: nasopharynx

text: Pregnant, thrombocytopenia, Admitted for fever and body aches, LAMA after 1 day

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63735-S6/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Clinical Lab, Aga Khan University Hospital

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63745-S3/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63755-S4/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63760-S5/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63768-S7/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63777-S20/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)

text: Infectious Diseases Research Laboratory, Department of Pediatrics and Child Health, Faculty of Health Sciences, Medical College, The Aga Khan University, Stadium Road, Karachi-74800, Pakistan


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63794-S18/2022

text: Homo sapiens

text: nasopharynx

text: Diabetic, raised ESR

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63827-S13/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63838-S9/2022

text: Homo sapiens

text: nasopharynx

text: hypothyroidism

text: female

text: nasal swab

text: Severe acute respiratory syndrome coronavirus 2

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63850-S12/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63863-S8/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63869-S15/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63871-S17/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63872-S11/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Clinical Lab, Aga Khan University Hospital

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63878-S19/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63879-S21/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63882-S14/2022

text: Homo sapiens

text: nasopharynx

text: raised CRP

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63887-S10/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63906-S16/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-3662-S27/2022

text: Homo sapiens

text: nasopharynx

text: Diabetes, Hypertension, Ischemic Heart Disease, Admitted for two days with COVID pneumonia

text: Female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)

text: Infectious Diseases Research Laboratory, Department of Pediatrics and Child Health, Faculty of Health Sciences, Medical College, The Aga Khan University, Stadium Road, Karachi-74800, Pakistan


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-5173-S20/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: Female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-33670-S26/2022

text: Homo sapiens

text: nasopharynx

text: Pregnant, Admitted for one day with abdominal pain and vomiting

text: Female

text: nasal swab

text: Severe acute respiratory syndrome coronavirus 2

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-36398-S21/2022

text: Homo sapiens

text: nasopharynx

text: Low grade fever, cough and shortness of breath for ten days and altered level of consciousness for one day, Comorbids: Diabetic, Hypertension, Ischemic Heart Disease Hospital course, Non-invasive ventilation was applied with supplemental oxygen. Intravenous broadspectrum antibiotics, steroids and prophylactic anticoagulation were started, Inj remdesvir was given for five days, Admitted in hospital for twenty days with Critical Covid Pneumonia with mucormycosis/Health-care associated pneumonia/Acute Kidney Injury

text: Female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-37679-S22/2022

text: Homo sapiens

text: nasopharynx

text: Diffuse axonal injury and Left humerus fracture secondary to road traffic accident, Tested positive on the routine hospital testing, for ER patients

text: Male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Clinical Lab, Aga Khan University Hospital

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-38263-S23/2022

text: Homo sapiens

text: nasopharynx

text: Right forearm wounds, ulna segmental open fracture, right thigh multiple wounds after bomb blast, Tested positive as part of pre-surgery testing protocol

text: Male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-39548-S24/2022

text: Homo sapiens

text: nasopharynx

text: Diabetes mellitus, Hypertension, Ischemic Heart Disease, Benign Prostatic Enlargement

text: Male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-47186-S25/2022

text: Homo sapiens

text: 4 M 1 D

text: nasopharynx

text: Expired, Covid Pneumonia/Mulitple Organ Dysfunction syndrome, Suspected Neurometabolic

text: Male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63862-S2/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: Female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)

text: Infectious Diseases Research Laboratory, Department of Pediatrics and Child Health, Faculty of Health Sciences, Medical College, The Aga Khan University, Stadium Road, Karachi-74800, Pakistan


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63884-S3/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: Male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63885-S5/2022

text: Homo sapiens

text: nasopharynx

text: Pregnant

text: Female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63897-S1/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: Female

text: nasal swab

text: Severe acute respiratory syndrome coronavirus 2

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63901-S4/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: Female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63915-S6/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: Male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63916-S8/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: Female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Clinical Lab, Aga Khan University Hospital

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63929-S9/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: Male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63930-S12/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: Male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63931-S10/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: Female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63934-S11/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: Female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63971-S15/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: Male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63979-S13/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: Male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-63986-S14/2022

text: Homo sapiens

text: nasopharynx

text: unknown

text: Female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: Guizhou University

text: live

text: Plant

text: Li zhi

text: fruiting

text: China

characteristic: ecotype

text: China:Guizhou

text: Camellia lipingensis

text: not collected

characteristic: sex

text: leaf

characteristic: tissue

text: Plant sample from Camellia lipingensis


text: China Agricultural University

text: live

text: Microbe, viral or environmental

text: China

text: pickle

text: Lactiplantibacillus plantarum

text: bacteria

characteristic: strain

text: Microbe sample from Lactiplantibacillus plantarum


characteristic: External Id

text: Shanghai Agrobiological Gene Center

text: live

text: Plant

text: 15 days after germination

characteristic: age

characteristic: cultivar

text: four leaf seedling

text: China:Shanghai

text: Oryza sativa

text: leaf

text: Plant sample from Oryza sativa


text: Lanzhou University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Plant

text: seedling

text: China: Lanzhou

text: Medicago sativa

text: leaf

text: Plant sample from Medicago sativa


text: Faculty of pharmaceutical science, Chulalongkorn University

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: Thailand:Satun

text: Syzygium jambos

text: tree bark

text: Sporolactobacillus sp. STSJ-5

text: Bacteria

text: Microbe sample from Sporolactobacillus sp. STSJ-5


text: University of Rome "La Sapienza"

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: Dr. Marco Sortichini

text: Italy: Lazio, Rome province

text: Apricot

text: 41.932611 N 12.554222 E

text: Pantoea agglomerans

text: ISF 438

text: Pathogen: environmental/food/other sample from Pantoea agglomerans


text: Faculty of Veterinary Science, Chulalongkorn University

text: live

text: Microbe, viral or environmental

text: Thailand:Nakhon pathom

text: Capra hircus

characteristic: host

text: rumen fluid

text: Ligilactobacillus sp. MP3

text: Bacteria

text: Microbe sample from Ligilactobacillus sp. MP3


text: live

text: Microbe, viral or environmental

text: Thailand:Nakhon pathom

text: Capra hircus

text: rumen fluid

text: Megasphaera sp. SC8-1

text: Bacteria

text: Microbe sample from Megasphaera sp. SC8-1


text: live

text: Microbe, viral or environmental

text: Thailand:Nakhon pathom

text: Capra hircus

text: rumen fluid

text: Cutibacterium sp. SC8-2W

text: Bacteria

text: Microbe sample from Cutibacterium sp. SC8-2W


HNU ISR0

text: Hunan University

text: live

text: Metagenome or environmental

text: China: Hunan

text: Suspended sludge

text: Anaerobic digestor R0

text: not collected

text: metagenome

text: Metagenome or environmental sample from metagenome


HNU ISR1

text: Hunan University

text: live

text: Metagenome or environmental

text: China: Hunan

text: Suspended sludge

text: Anaerobic digestor R1

text: not collected

text: metagenome


HNU ISR2

text: Hunan University

text: live

text: Metagenome or environmental

text: China: Hunan

text: Suspended sludge

text: Anaerobic digestor R2

text: not collected

text: metagenome


HNU ISR3

text: Hunan University

text: live

text: Metagenome or environmental

text: China: Hunan

text: Suspended sludge

text: Anaerobic digestor R3

text: not collected

text: metagenome


HNU IISR0

text: Hunan University

text: live

text: Metagenome or environmental

text: China: Hunan

text: Suspended sludge

text: Anaerobic digestor R0

text: not collected

text: metagenome


HNU IISR1

text: Hunan University

text: live

text: Metagenome or environmental

text: China: Hunan

text: Suspended sludge

text: Anaerobic digestor R1

text: not collected

text: metagenome


HNU IISR2

text: Hunan University

text: live

text: Metagenome or environmental

text: China: Hunan

text: Suspended sludge

text: Anaerobic digestor R2

text: not collected

text: metagenome


HNU IISR3

text: Hunan University

text: live

text: Metagenome or environmental

text: China: Hunan

text: Suspended sludge

text: Anaerobic digestor R3

text: not collected

text: metagenome


HNU IIACR0 replicate 1

text: Hunan University

text: live

text: Metagenome or environmental

text: China: Hunan

text: Biofilm 1

text: Anaerobic digestor R0

text: not collected

text: metagenome


HNU IIAR1

text: Hunan University

text: live

text: Metagenome or environmental

text: China: Hunan

text: Anodic biofilm

text: Anaerobic digestor R1

text: not collected

text: metagenome


HNU IIAR2

text: Hunan University

text: live

text: Metagenome or environmental

text: China: Hunan

text: Anodic biofilm

text: Anaerobic digestor R2

text: not collected

text: metagenome


HNU IIAR3

text: Hunan University

text: live

text: Metagenome or environmental

text: China: Hunan

text: Anodic biofilm

text: Anaerobic digestor R3

text: not collected

text: metagenome


HNU IIACR0 replicate 2

text: Hunan University

text: live

text: Metagenome or environmental

text: China: Hunan

text: Biofilm 2

text: Anaerobic digestor R0

text: not collected

text: metagenome


HNU IICR1

text: Hunan University

text: live

text: Metagenome or environmental

text: China: Hunan

text: Cathodic biofilm

text: Anaerobic digestor R1

text: not collected

text: metagenome


HNU IICR2

text: Hunan University

text: live

text: Metagenome or environmental

text: China: Hunan

text: Cathodic biofilm

text: Anaerobic digestor R2

text: not collected

text: metagenome


HNU IICR3

text: Hunan University

text: live

text: Metagenome or environmental

text: China: Hunan

text: Cathodic biofilm

text: Anaerobic digestor R3

text: not collected

text: metagenome


HNU WAS

text: Hunan University

text: live

text: Metagenome or environmental

text: China: Hunan

text: Waste activated sludge

text: WTTP

text: not collected

text: metagenome


HNU Inocula

text: Hunan University

text: live

text: Metagenome or environmental

text: China: Hunan

text: Digested sludge

text: Anaerobic digestor

text: not collected

text: metagenome


text: University of Missouri

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

characteristic: SRA accession

text: Stowers Institute

text: adult

text: Pachon

text: Astyanax mexicanus

text: female

text: muscle

text: Model organism or animal sample from Astyanax mexicanus


text: Zhejiang agriculture and Forestry University

text: live

text: Metagenome or environmental

text: G1 replicate1

characteristic: description

text: China

text: Cecal contents

text: 30.80 N 119.81 E

text: chicken gut metagenome

characteristic: organism

text: biological replicate 1

characteristic: replicate

text: Metagenome or environmental sample from chicken gut metagenome

characteristic: title


text: live

text: Metagenome or environmental

text: G1 replicate2

text: China

text: Cecal contents

text: 30.80 N 119.81 E

text: chicken gut metagenome

text: biological replicate 2


text: live

text: Metagenome or environmental

text: G1 replicate3

text: China

text: Cecal contents

text: 30.80 N 119.81 E

text: chicken gut metagenome

text: biological replicate 3


text: live

text: Metagenome or environmental

text: G1 replicate4

text: China

text: Cecal contents

text: 30.80 N 119.81 E

text: chicken gut metagenome

text: biological replicate 4


text: live

text: Metagenome or environmental

text: G1 replicate5

text: China

text: Cecal contents

text: 30.80 N 119.81 E

text: chicken gut metagenome

text: biological replicate 5


text: live

text: Metagenome or environmental

text: G1 replicate6

text: China

text: Cecal contents

text: 30.80 N 119.81 E

text: chicken gut metagenome

text: biological replicate 6


text: live

text: Metagenome or environmental

text: G1 replicate7

text: China

text: Cecal contents

text: 30.80 N 119.81 E

text: chicken gut metagenome

text: biological replicate 7


text: live

text: Metagenome or environmental

text: G1 replicate8

text: China

text: Cecal contents

text: 30.80 N 119.81 E

text: chicken gut metagenome

text: biological replicate 8


text: live

text: Metagenome or environmental

text: G2 replicate1

text: China

text: Cecal contents

text: 30.80 N 119.81 E

text: chicken gut metagenome

text: biological replicate 1


text: live

text: Metagenome or environmental

text: G2 replicate2

text: China

text: Cecal contents

text: 30.80 N 119.81 E

text: chicken gut metagenome

text: biological replicate 2


text: live

text: Metagenome or environmental

text: G2 replicate3

text: China

text: Cecal contents

text: 30.80 N 119.81 E

text: chicken gut metagenome

text: biological replicate 3


text: live

text: Metagenome or environmental

text: G2 replicate4

text: China

text: Cecal contents

text: 30.80 N 119.81 E

text: chicken gut metagenome

text: biological replicate 4


text: live

text: Metagenome or environmental

text: G2 replicate5

text: China

text: Cecal contents

text: 30.80 N 119.81 E

text: chicken gut metagenome

text: biological replicate 5


text: live

text: Metagenome or environmental

text: G2 replicate6

text: China

text: Cecal contents

text: 30.80 N 119.81 E

text: chicken gut metagenome

text: biological replicate 6


text: live

text: Metagenome or environmental

text: G2 replicate7

text: China

text: Cecal contents

text: 30.80 N 119.81 E

text: chicken gut metagenome

text: biological replicate 7


text: live

text: Metagenome or environmental

text: G2 replicate8

text: China

text: Cecal contents

text: 30.80 N 119.81 E

text: chicken gut metagenome

text: biological replicate 8