text: CIRI - INSERM U1111

text: live

text: Generic

text: Mus musculus

text: draining lymph node

text: OVA+DCs 8 weeks (s005)


status: PUBLIC

characteristic: External Id

text: CIRI - INSERM U1111

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: mixed sample (representing LC, cDC2, cDC1)

tag: attribute

characteristic: cell type

text: Mus musculus

characteristic: organism

text: draining lymph node

characteristic: time

text: OVA+DCs 1 week (s006)

characteristic: title


text: CIRI - INSERM U1111

text: live

text: Generic

text: Mus musculus

text: draining lymph node

text: OVA+DCs 3 weeks (s007)


text: CIRI - INSERM U1111

text: live

text: Generic

text: Mus musculus

text: draining lymph node

text: OVA+DCs 8 weeks (s008)


text: CIRI - INSERM U1111

text: live

text: Generic

text: Mus musculus

text: draining lymph node

text: OVA-DCs allergic mice (s009)


text: Okinawa Institute of Science and Technology Graduate University

text: live

text: Microbe, viral or environmental

text: Yohei Yokobayashi, Yokobayashi Unit, OIST

text: E. coli MG1655 was cultured in LB medium supplemented with 50mM MOPS pH 7.2 and 0.2 % glucose. Overnight cultures grown at 37°C were diluted into fresh medium and grown until reaching an OD600 of about 1.0 at the target temperature. These cultures were used to inoculate 50 ml medium at the desired temperature in 500ml Erlenmeyer flasks with baffles at a target OD of 0.01. Cultivation was always performed with shaking at 250 rpm. OD was determined with a NanoDrop One in cuvette mode. The cultures (1.4 ml) were harvested by centrifugation at 21000g for 20 seconds after reaching an OD of around 0.5 (mid-exponential phase). Cells were kept growing for at least 45 doubling times (as measured in exponential phase) to reach stationary phase. Samples of 0.2 ml from the stationary phase cultures were harvested for DNA extraction. The pellets were immediately frozen at -80°C until DNA extraction. DNA was extracted in parallel using Genomic DNA Purification Kit from Thermo Fisher Scientific.

characteristic: description

text: Japan: Okinawa

text: exponential

text: not applicable

characteristic: host

characteristic: isolate

text: not applicable

text: Escherichia coli K-12

text: biological replicate 1

characteristic: replicate

text: cell culture

characteristic: strain

characteristic: temp

text: Escherichia coli str. K-12 substr. MG1655 grown at 17 °C in exponential phase, replicate 1


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: Japan: Okinawa

text: exponential

text: not applicable

text: not applicable

text: Escherichia coli K-12

text: biological replicate 2

text: cell culture

text: Escherichia coli str. K-12 substr. MG1655 grown at 17 °C in exponential phase, replicate 2


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: Japan: Okinawa

text: exponential

text: not applicable

text: not applicable

text: Escherichia coli K-12

text: biological replicate 3

text: cell culture

text: Escherichia coli str. K-12 substr. MG1655 grown at 17 °C in exponential phase, replicate 3


text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Japan: Okinawa

text: stationary

text: not applicable

text: not applicable

text: Escherichia coli K-12

text: no replicate

text: cell culture

text: Escherichia coli str. K-12 substr. MG1655 grown at 17 °C in stationary phase (no replicates)


text: live

text: Microbe, viral or environmental

text: Japan: Okinawa

text: exponential

text: not applicable

text: not applicable

text: Escherichia coli K-12

characteristic: organism

text: biological replicate 1

text: cell culture

text: Escherichia coli str. K-12 substr. MG1655 grown at 22 °C in exponential phase, replicate 1


text: live

text: Microbe, viral or environmental

text: Japan: Okinawa

text: exponential

text: not applicable

text: not applicable

text: Escherichia coli K-12

text: biological replicate 2

text: cell culture

text: Escherichia coli str. K-12 substr. MG1655 grown at 22 °C in exponential phase, replicate 2

characteristic: title


text: live

text: Microbe, viral or environmental

characteristic: description

text: Japan: Okinawa

text: exponential

text: not applicable

text: not applicable

text: Escherichia coli K-12

text: biological replicate 3

text: cell culture

text: Escherichia coli str. K-12 substr. MG1655 grown at 22 °C in exponential phase, replicate 3


text: live

text: Microbe, viral or environmental

text: Japan: Okinawa

text: exponential

text: not applicable

characteristic: host

text: not applicable

text: Escherichia coli K-12

text: biological replicate 1

text: cell culture

text: Escherichia coli str. K-12 substr. MG1655 grown at 27 °C in exponential phase, replicate 1


text: live

text: Microbe, viral or environmental

text: Japan: Okinawa

text: exponential

text: not applicable

characteristic: isolate

text: not applicable

text: Escherichia coli K-12

text: biological replicate 2

text: cell culture

text: Escherichia coli str. K-12 substr. MG1655 grown at 27 °C in exponential phase, replicate 2


text: live

text: Microbe, viral or environmental

text: Japan: Okinawa

text: exponential

text: not applicable

text: not applicable

text: Escherichia coli K-12

text: biological replicate 3

characteristic: replicate

text: cell culture

text: Escherichia coli str. K-12 substr. MG1655 grown at 27 °C in exponential phase, replicate 3


text: live

text: Microbe, viral or environmental

text: Japan: Okinawa

text: stationary

text: not applicable

text: not applicable

text: Escherichia coli K-12

text: no replicate

text: cell culture

characteristic: strain

text: Escherichia coli str. K-12 substr. MG1655 grown at 27 °C in stationary phase (no replicates)


text: live

text: Microbe, viral or environmental

text: Japan: Okinawa

text: exponential

text: not applicable

text: not applicable

text: Escherichia coli K-12

text: biological replicate 1

text: cell culture

characteristic: temp

text: Escherichia coli str. K-12 substr. MG1655 grown at 32 °C in exponential phase, replicate 1


characteristic: External Id

text: live

text: Microbe, viral or environmental

text: Japan: Okinawa

text: exponential

text: not applicable

text: not applicable

text: Escherichia coli K-12

text: biological replicate 2

text: cell culture

text: Escherichia coli str. K-12 substr. MG1655 grown at 32 °C in exponential phase, replicate 2


characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: Japan: Okinawa

text: exponential

text: not applicable

text: not applicable

text: Escherichia coli K-12

text: biological replicate 3

text: cell culture

text: Escherichia coli str. K-12 substr. MG1655 grown at 32 °C in exponential phase, replicate 3


text: Okinawa Institute of Science and Technology Graduate University

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: Japan: Okinawa

text: exponential

text: not applicable

text: not applicable

text: Escherichia coli K-12

text: biological replicate 1

text: cell culture

text: Escherichia coli str. K-12 substr. MG1655 grown at 37 °C in exponential phase, replicate 1


characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Yohei Yokobayashi, Yokobayashi Unit, OIST

text: E. coli MG1655 was cultured in LB medium supplemented with 50mM MOPS pH 7.2 and 0.2 % glucose. Overnight cultures grown at 37°C were diluted into fresh medium and grown until reaching an OD600 of about 1.0 at the target temperature. These cultures were used to inoculate 50 ml medium at the desired temperature in 500ml Erlenmeyer flasks with baffles at a target OD of 0.01. Cultivation was always performed with shaking at 250 rpm. OD was determined with a NanoDrop One in cuvette mode. The cultures (1.4 ml) were harvested by centrifugation at 21000g for 20 seconds after reaching an OD of around 0.5 (mid-exponential phase). Cells were kept growing for at least 45 doubling times (as measured in exponential phase) to reach stationary phase. Samples of 0.2 ml from the stationary phase cultures were harvested for DNA extraction. The pellets were immediately frozen at -80°C until DNA extraction. DNA was extracted in parallel using Genomic DNA Purification Kit from Thermo Fisher Scientific.

text: Japan: Okinawa

text: exponential

text: not applicable

text: not applicable

text: Escherichia coli K-12

text: biological replicate 2

text: cell culture

text: Escherichia coli str. K-12 substr. MG1655 grown at 37 °C in exponential phase, replicate 2


characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

text: Japan: Okinawa

text: exponential

text: not applicable

text: not applicable

text: Escherichia coli K-12

text: biological replicate 3

text: cell culture

text: Escherichia coli str. K-12 substr. MG1655 grown at 37 °C in exponential phase, replicate 3


text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: Japan: Okinawa

text: stationary

text: not applicable

text: not applicable

text: Escherichia coli K-12

text: no replicate

text: cell culture

text: Escherichia coli str. K-12 substr. MG1655 grown at 37 °C in stationary phase (no replicates)


microbiomes

text: Shenzhen institution of advanced technology

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

text: China

text: Mouse

text: feces

text: 22.5431 N 114.0579 E

text: mouse gut metagenome

text: Metagenome or environmental sample from mouse gut metagenome


text: YanTai University

text: live

text: Model organism or animal

characteristic: NCBI submission package

text: six-week-old

characteristic: age

text: mouse gut metagenome

text: male

characteristic: sex

text: Mice feces

characteristic: tissue


text: Gustave Roussy

text: live

text: Generic

characteristic: SRA accession

text: Leukemic erythroid cells

characteristic: cell type

text: Mus musculus

characteristic: organism

text: Bone marrow leukemic cells

text: RNAseq_Dox_Untreated_rep1 [722]

characteristic: title

characteristic: treatment


text: Gustave Roussy

text: live

text: Generic

text: Leukemic erythroid cells

text: Mus musculus

text: Bone marrow leukemic cells

text: RNAseq_Dox_Untreated_rep2 [722]


text: Gustave Roussy

text: live

text: Generic

text: Leukemic erythroid cells

text: Mus musculus

text: Bone marrow leukemic cells

text: RNAseq_Dox_Untreated_rep3 [722]


text: Gustave Roussy

text: live

text: Generic

text: Leukemic erythroid cells

text: Mus musculus

text: Bone marrow leukemic cells

text: RNAseq_Dox_Treated_rep1 [722]


text: Gustave Roussy

text: live

text: Generic

text: Leukemic erythroid cells

text: Mus musculus

text: Bone marrow leukemic cells

text: RNAseq_Dox_Treated_rep2 [722]


text: Gustave Roussy

text: live

text: Generic

text: Leukemic erythroid cells

text: Mus musculus

text: Bone marrow leukemic cells

text: RNAseq_Dox_Treated_rep3 [722]


text: SARS-CoV-2/Human/USA/WV-CDC-LC0361858/2021

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Laboratory Corporation of America

characteristic: collected by

characteristic: collection date

text: Nasal Swabs

characteristic: collection method

text: Nasal Swabs

text: N1 gene

text: N2 gene

text: RP gene

text: Labcorp LDT

text: Labcorp LDT

text: Labcorp LDT

text: USA: West Virginia

characteristic: geo loc name

text: Homo sapiens

characteristic: host

characteristic: host age

characteristic: host disease

text: male

characteristic: host sex

characteristic: isolate

text: Nasal Swabs

characteristic: isolation source

characteristic: lineage/clade name

text: Severe acute respiratory syndrome coronavirus 2

text: baseline surveillance (random sampling)

text: CDC Sars CoV2 Sequencing Baseline Constellation


characteristic: External Id

text: SARS-CoV-2/Human/USA/WV-CDC-LC0361831/2021

text: CDC-OAMD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Laboratory Corporation of America

text: Nasal Swabs

text: Nasal Swabs

text: N1 gene

text: N2 gene

text: RP gene

text: Labcorp LDT

text: Labcorp LDT

text: Labcorp LDT

text: USA: West Virginia

text: Homo sapiens

text: female

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/WV-CDC-LC0361814/2021

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: Laboratory Corporation of America

characteristic: collected by

characteristic: collection date

text: Nasal Swabs

characteristic: collection method

text: Nasal Swabs

text: N1 gene

text: N2 gene

text: RP gene

text: Labcorp LDT

text: Labcorp LDT

text: Labcorp LDT

text: USA: West Virginia

text: Homo sapiens

text: female

text: Nasal Swabs

characteristic: organism

text: baseline surveillance (random sampling)

characteristic: title


text: SARS-CoV-2/Human/USA/TX-CDC-LC0362440/2021

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Laboratory Corporation of America

text: Nasal Swabs

text: Nasal Swabs

text: N1 gene

text: N2 gene

text: RP gene

text: Labcorp LDT

text: Labcorp LDT

text: Labcorp LDT

text: USA: Texas

characteristic: geo loc name

text: Homo sapiens

characteristic: host

characteristic: host age

characteristic: host disease

text: female

characteristic: host sex

characteristic: isolate

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/TX-CDC-LC0362433/2021

characteristic: External Id

text: CDC-OAMD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: Laboratory Corporation of America

text: Nasal Swabs

text: Nasal Swabs

text: N1 gene

text: N2 gene

text: RP gene

text: Labcorp LDT

text: Labcorp LDT

text: Labcorp LDT

text: USA: Texas

text: Homo sapiens

text: male

text: Nasal Swabs

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/TX-CDC-LC0361830/2021

text: CDC-OAMD

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Laboratory Corporation of America

characteristic: collected by

text: Nasal Swabs

text: Nasal Swabs

text: N1 gene

text: N2 gene

text: RP gene

text: Labcorp LDT

text: Labcorp LDT

text: Labcorp LDT

text: USA: Texas

text: Homo sapiens

text: female

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/TX-CDC-LC0361741/2021

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Laboratory Corporation of America

characteristic: collection date

text: Nasal Swabs

characteristic: collection method

text: Nasal Swabs

text: N1 gene

text: N2 gene

text: RP gene

text: Labcorp LDT

text: Labcorp LDT

text: Labcorp LDT

text: USA: Texas

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: female

text: Nasal Swabs

characteristic: organism

text: baseline surveillance (random sampling)

characteristic: title


characteristic: External Id

text: SARS-CoV-2/Human/USA/TX-CDC-LC0361738/2021

text: CDC-OAMD

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: Laboratory Corporation of America

text: Nasal Swabs

text: Nasal Swabs

text: N1 gene

text: N2 gene

text: RP gene

text: Labcorp LDT

text: Labcorp LDT

text: Labcorp LDT

text: USA: Texas

text: Homo sapiens

characteristic: host age

characteristic: host disease

text: female

characteristic: host sex

characteristic: isolate

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/TN-CDC-LC0362448/2021

text: CDC-OAMD

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: Laboratory Corporation of America

text: Nasal Swabs

text: Nasal Swabs

text: N1 gene

text: N2 gene

text: RP gene

text: Labcorp LDT

text: Labcorp LDT

text: Labcorp LDT

text: USA: Tennessee

text: Homo sapiens

text: male

text: Nasal Swabs

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/TN-CDC-LC0362420/2021

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Laboratory Corporation of America

characteristic: collected by

characteristic: collection date

text: Nasal Swabs

characteristic: collection method

text: Nasal Swabs

text: N1 gene

text: N2 gene

text: RP gene

text: Labcorp LDT

text: Labcorp LDT

text: Labcorp LDT

text: USA: Tennessee

text: Homo sapiens

text: female

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/TN-CDC-LC0362404/2021

characteristic: External Id

text: CDC-OAMD

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: Laboratory Corporation of America

text: Nasal Swabs

text: Nasal Swabs

text: N1 gene

text: N2 gene

text: RP gene

text: Labcorp LDT

text: Labcorp LDT

text: Labcorp LDT

text: USA: Tennessee

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: male

text: Nasal Swabs

characteristic: organism

text: baseline surveillance (random sampling)

characteristic: title


text: SARS-CoV-2/Human/USA/TN-CDC-LC0362394/2021

text: CDC-OAMD

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: Laboratory Corporation of America

text: Nasal Swabs

text: Nasal Swabs

text: N1 gene

text: N2 gene

text: RP gene

text: Labcorp LDT

text: Labcorp LDT

text: Labcorp LDT

text: USA: Tennessee

text: Homo sapiens

characteristic: host age

characteristic: host disease

text: male

characteristic: host sex

characteristic: isolate

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/TN-CDC-LC0362393/2021

text: CDC-OAMD

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Laboratory Corporation of America

text: Nasal Swabs

text: Nasal Swabs

text: N1 gene

text: N2 gene

text: RP gene

text: Labcorp LDT

text: Labcorp LDT

text: Labcorp LDT

text: USA: Tennessee

text: Homo sapiens

text: male

text: Nasal Swabs

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/TN-CDC-LC0362387/2021

characteristic: External Id

text: CDC-OAMD

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: Laboratory Corporation of America

characteristic: collected by

characteristic: collection date

text: Nasal Swabs

characteristic: collection method

text: Nasal Swabs

text: N1 gene

text: N2 gene

text: RP gene

text: Labcorp LDT

text: Labcorp LDT

text: Labcorp LDT

text: USA: Tennessee

text: Homo sapiens

text: female

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/TN-CDC-LC0362067/2021

text: CDC-OAMD

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: Laboratory Corporation of America

text: Nasal Swabs

text: Nasal Swabs

text: N1 gene

text: N2 gene

text: RP gene

text: Labcorp LDT

text: Labcorp LDT

text: Labcorp LDT

text: USA: Tennessee

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: male

text: Nasal Swabs

characteristic: organism

text: baseline surveillance (random sampling)

characteristic: title


text: SARS-CoV-2/Human/USA/TN-CDC-LC0361674/2021

text: CDC-OAMD

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: Laboratory Corporation of America

text: Nasal Swabs

text: Nasal Swabs

text: N1 gene

text: N2 gene

text: RP gene

text: Labcorp LDT

text: Labcorp LDT

text: Labcorp LDT

text: USA: Tennessee

text: Homo sapiens

characteristic: host age

characteristic: host disease

text: female

characteristic: host sex

characteristic: isolate

text: Nasal Swabs

text: baseline surveillance (random sampling)


characteristic: External Id

text: SARS-CoV-2/Human/USA/TN-CDC-LC0361655/2021

text: CDC-OAMD

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Laboratory Corporation of America

text: Nasal Swabs

text: Nasal Swabs

text: N1 gene

text: N2 gene

text: RP gene

text: Labcorp LDT

text: Labcorp LDT

text: Labcorp LDT

text: USA: Tennessee

text: Homo sapiens

text: male

text: Nasal Swabs

characteristic: isolation source

characteristic: lineage/clade name

text: Severe acute respiratory syndrome coronavirus 2

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/TN-CDC-LC0361652/2021

text: CDC-OAMD

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: Laboratory Corporation of America

characteristic: collected by

characteristic: collection date

text: Nasal Swabs

characteristic: collection method

text: Nasal Swabs

text: N1 gene

text: N2 gene

text: RP gene

text: Labcorp LDT

text: Labcorp LDT

text: Labcorp LDT

text: USA: Tennessee

text: Homo sapiens

text: female

text: Nasal Swabs

text: baseline surveillance (random sampling)

text: CDC Sars CoV2 Sequencing Baseline Constellation


text: SARS-CoV-2/Human/USA/TN-CDC-LC0361634/2021

text: CDC-OAMD

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: Laboratory Corporation of America

text: Nasal Swabs

text: Nasal Swabs

text: N1 gene

text: N2 gene

text: RP gene

text: Labcorp LDT

text: Labcorp LDT

text: Labcorp LDT

text: USA: Tennessee

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: female

text: Nasal Swabs

characteristic: organism

text: baseline surveillance (random sampling)

characteristic: title


text: SARS-CoV-2/Human/USA/TN-CDC-LC0361633/2021

characteristic: External Id

text: CDC-OAMD

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: Laboratory Corporation of America

text: Nasal Swabs

text: Nasal Swabs

text: N1 gene

text: N2 gene

text: RP gene

text: Labcorp LDT

text: Labcorp LDT

text: Labcorp LDT

text: USA: Tennessee

text: Homo sapiens

characteristic: host age

characteristic: host disease

text: female

characteristic: host sex

characteristic: isolate

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/TN-CDC-LC0361632/2021

text: CDC-OAMD

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Laboratory Corporation of America

text: Nasal Swabs

text: Nasal Swabs

text: N1 gene

text: N2 gene

text: RP gene

text: Labcorp LDT

text: Labcorp LDT

text: Labcorp LDT

text: USA: Tennessee

text: Homo sapiens

text: male

text: Nasal Swabs

characteristic: isolation source

characteristic: lineage/clade name

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/TN-CDC-LC0361620/2021

text: CDC-OAMD

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: Laboratory Corporation of America

characteristic: collected by

characteristic: collection date

text: Nasal Swabs

characteristic: collection method

text: Nasal Swabs

text: N1 gene

text: N2 gene

text: RP gene

text: Labcorp LDT

text: Labcorp LDT

text: Labcorp LDT

text: USA: Tennessee

text: Homo sapiens

text: female

text: Nasal Swabs

text: baseline surveillance (random sampling)


characteristic: External Id

text: SARS-CoV-2/Human/USA/SC-CDC-LC0362441/2021

text: CDC-OAMD

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: Laboratory Corporation of America

text: Nasal Swabs

text: Nasal Swabs

text: N1 gene

text: N2 gene

text: RP gene

text: Labcorp LDT

text: Labcorp LDT

text: Labcorp LDT

text: USA: South Carolina

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: female

text: Nasal Swabs

characteristic: organism

text: baseline surveillance (random sampling)

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