characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Clostridium sp.

characteristic: project name

characteristic: sample derived from

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR14474046_bin.38_metaWRAP_v1.3_MAG

characteristic: title


status: PUBLIC

tag: attribute

characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR14474046 of study SRP319028.

text: Pig digestive system

text: Colon

text: Feces

text: China

unit: DD

text: metagenome-assembled genome

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

text: uncultured bacterium

characteristic: organism

text: Analyze the bacteria and antibiotic resistance gene in pig fecal in China

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR14474046_bin.4_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Parabacteroides sp.

characteristic: project name

characteristic: sample derived from

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR14474046_bin.40_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

text: Pig digestive system

text: Colon

text: Feces

text: China

text: metagenome-assembled genome

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

text: uncultured Mollicutes bacterium

characteristic: organism

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR14474046_bin.7_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR14474047 of study SRP319028.

characteristic: description

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Butyrivibrio sp.

characteristic: project name

characteristic: sample derived from

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR14474047_bin.10_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

text: Pig digestive system

text: Colon

text: Feces

text: China

text: metagenome-assembled genome

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

text: uncultured Clostridia bacterium

characteristic: organism

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR14474047_bin.15_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Verrucomicrobia bacterium

characteristic: project name

characteristic: sample derived from

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR14474047_bin.16_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

text: Pig digestive system

text: Colon

text: Feces

text: China

text: metagenome-assembled genome

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

text: uncultured Bacteroidales bacterium

characteristic: organism

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR14474047_bin.17_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

characteristic: project name

characteristic: sample derived from

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR14474047_bin.23_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

text: Pig digestive system

text: Colon

text: Feces

text: China

text: metagenome-assembled genome

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

text: uncultured Bacteroidales bacterium

characteristic: organism

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR14474047_bin.26_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Fibrobacter sp.

characteristic: project name

characteristic: sample derived from

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR14474047_bin.28_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

text: Pig digestive system

text: Colon

text: Feces

text: China

text: metagenome-assembled genome

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

text: uncultured Treponema sp.

characteristic: organism

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR14474047_bin.29_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Prevotella sp.

characteristic: project name

characteristic: sample derived from

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR14474047_bin.30_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

text: Pig digestive system

text: Colon

text: Feces

text: China

text: metagenome-assembled genome

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

text: uncultured Bacteroidales bacterium

characteristic: organism

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR14474047_bin.4_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Bacteroidales bacterium

characteristic: project name

characteristic: sample derived from

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR14474047_bin.7_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR14474048 of study SRP319028.

text: Pig digestive system

text: Colon

text: Feces

text: China

text: metagenome-assembled genome

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

text: uncultured Treponema sp.

characteristic: organism

text: Analyze the bacteria and antibiotic resistance gene in pig fecal in China

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR14474048_bin.10_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

characteristic: project name

characteristic: sample derived from

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR14474048_bin.13_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

text: Pig digestive system

text: Colon

text: Feces

text: China

text: metagenome-assembled genome

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

text: uncultured Bacteroides sp.

characteristic: organism

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR14474048_bin.17_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

text: pig gut metagenome

characteristic: metagenomic source

text: Acinetobacter lwoffii

characteristic: project name

characteristic: sample derived from

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR14474048_bin.18_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

text: Pig digestive system

text: Colon

text: Feces

text: China

text: metagenome-assembled genome

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

text: uncultured Bacteroidales bacterium

characteristic: organism

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR14474048_bin.2_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Gammaproteobacteria bacterium

characteristic: project name

characteristic: sample derived from

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR14474048_bin.21_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

text: Pig digestive system

text: Colon

text: Feces

text: China

text: metagenome-assembled genome

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

text: uncultured Lachnospiraceae bacterium

characteristic: organism

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR14474048_bin.22_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Ruminococcus sp.

characteristic: project name

characteristic: sample derived from

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR14474048_bin.25_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

text: Pig digestive system

text: Colon

text: Feces

text: China

text: metagenome-assembled genome

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

text: uncultured bacterium

characteristic: organism

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR14474048_bin.31_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Prevotellaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR14474048_bin.9_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR14474049 of study SRP319028.

text: Pig digestive system

text: Colon

text: Feces

text: China

text: metagenome-assembled genome

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

text: uncultured Prevotella sp.

characteristic: organism

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR14474049_bin.1_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Erysipelotrichaceae bacterium

characteristic: project name

characteristic: sample derived from

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR14474049_bin.12_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

text: Pig digestive system

text: Colon

text: Feces

text: China

text: metagenome-assembled genome

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

text: uncultured Bacteroidales bacterium

characteristic: organism

text: Analyze the bacteria and antibiotic resistance gene in pig fecal in China

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR14474049_bin.13_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Prevotella sp.

characteristic: project name

characteristic: sample derived from

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR14474049_bin.15_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

text: Pig digestive system

text: Colon

text: Feces

text: China

text: metagenome-assembled genome

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

text: Chlamydia suis

characteristic: organism

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR14474049_bin.16_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

text: pig gut metagenome

characteristic: metagenomic source

text: Megasphaera elsdenii

characteristic: project name

characteristic: sample derived from

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR14474049_bin.18_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

text: Pig digestive system

text: Colon

text: Feces

text: China

text: metagenome-assembled genome

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

text: uncultured Dialister sp.

characteristic: organism

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR14474049_bin.19_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Bacteroidales bacterium

characteristic: project name

characteristic: sample derived from

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR14474049_bin.23_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

text: Pig digestive system

text: Colon

text: Feces

text: China

text: metagenome-assembled genome

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

text: uncultured Lactobacillus sp.

characteristic: organism

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR14474049_bin.24_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Psychrobacter sp.

characteristic: project name

characteristic: sample derived from

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR14474049_bin.25_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

text: Pig digestive system

text: Colon

text: Feces

text: China

text: metagenome-assembled genome

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

text: uncultured Treponema sp.

characteristic: organism

text: Illumina NovaSeq 6000

text: multi-marker approach

text: Metagenome-assembled genome: SRR14474049_bin.26_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

characteristic: description

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: project name

characteristic: sample derived from

text: Illumina NovaSeq 6000

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR14474049_bin.29_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

text: statens serum institut and the danish covid19 genome consortium (dcgc)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

tag: Namespace:Statens Serum Institut and the Danish Covid19 Genome Consortium (DCGC)

characteristic: Submitter Id

text: Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Hovedstaden

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: active surveillance in response to outbreak

characteristic: sample capture status


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Statens Serum Institut and the Danish Covid19 Genome Consortium (DCGC)

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Danish Covid-19 Genome Consortium

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Midtjylland

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

text: Denmark

text: Sjaelland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Hovedstaden

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Syddanmark

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Midtjylland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2022-01-24

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Sjaelland

text: Human

text: n_infections=2,last_infection_date=2022-02-07

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Syddanmark

text: Human

text: n_infections=2,last_infection_date=2020-11-23

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Sjaelland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-183243/2021

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Hovedstaden

text: Human

text: n_infections=2,last_infection_date=2021-12-06

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Midtjylland

text: Human

text: n_infections=2,last_infection_date=2022-01-17

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Hovedstaden

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2021-12-27

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Sjaelland

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-188099/2021

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Midtjylland

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Hovedstaden

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2022-01-10

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Syddanmark

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-303582/2022

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Sjaelland

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Hovedstaden

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-194951/2021

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Midtjylland

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Sjaelland

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Nordjylland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2022-01-03

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

text: statens serum institut and the danish covid19 genome consortium (dcgc)

characteristic: INSDC center name

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Hovedstaden

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Syddanmark

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Hovedstaden

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

text: Severe acute respiratory syndrome coronavirus 2


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

text: active surveillance in response to outbreak

characteristic: sample capture status


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: Statens Serum Institut and the Danish Covid19 Genome Consortium (DCGC)

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Nordjylland

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Sjaelland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Nordjylland

text: Human

text: n_infections=2,last_infection_date=2021-11-01

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Midtjylland

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Midtjylland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2021-12-13

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Syddanmark

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Sjaelland

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-67867/2021

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Hovedstaden

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-322680/2022

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Sjaelland

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-68104/2021

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Midtjylland

text: Human

text: n_infections=2,last_infection_date=2021-01-04

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Midtjylland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Sjaelland

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-198831/2021

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Sjaelland

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Hovedstaden

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Syddanmark

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Hovedstaden

text: Human

text: n_infections=2,last_infection_date=2022-01-24

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Syddanmark

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Nordjylland

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Syddanmark

text: Human

text: n_infections=2,last_infection_date=2022-01-31

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Midtjylland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Syddanmark

text: Human

text: n_infections=3,last_infection_date=2022-01-31

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Hovedstaden

text: Human

text: n_infections=2,last_infection_date=2021-12-06

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Hovedstaden

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Sjaelland

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-187522/2021

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


text: statens serum institut and the danish covid19 genome consortium (dcgc)

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Hovedstaden

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2022-01-03

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

text: Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Hovedstaden

text: Human

text: n_infections=2,last_infection_date=2021-11-15

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

characteristic: sample capture status


text: Statens Serum Institut and the Danish Covid19 Genome Consortium (DCGC)

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Midtjylland

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

text: active surveillance in response to outbreak

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Hovedstaden

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-165406/2021

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Syddanmark

text: Human

text: n_infections=2,last_infection_date=2022-02-21

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Hovedstaden

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Midtjylland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-177074/2021

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Syddanmark

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Sjaelland

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Nordjylland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Hovedstaden

text: Human

text: n_infections=2,last_infection_date=2021-01-04

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Hovedstaden

text: Human

text: n_infections=2,last_infection_date=2020-11-02

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Syddanmark

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2022-03-21

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Midtjylland

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-471506/2022

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Syddanmark

text: Human

text: n_infections=2,last_infection_date=2020-12-07

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Syddanmark

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=3,last_infection_date=2022-02-28

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Hovedstaden

text: Human

text: n_infections=2,last_infection_date=2020-11-16

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

text: statens serum institut and the danish covid19 genome consortium (dcgc)

characteristic: INSDC center name

text: public

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Sjaelland

text: Human

text: n_infections=2,last_infection_date=2021-12-27

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Midtjylland

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Hovedstaden

text: Human

text: n_infections=2,last_infection_date=2021-12-06

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Syddanmark

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: n_infections=2,last_infection_date=2022-01-24

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided

text: Severe acute respiratory syndrome coronavirus 2


text: Statens Serum Institut and the Danish Covid19 Genome Consortium (DCGC)

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Hovedstaden

text: Human

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

text: active surveillance in response to outbreak

characteristic: sample capture status


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Midtjylland

text: Human

text: n_infections=2,last_infection_date=2020-12-21

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Syddanmark

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Hovedstaden

text: Human

text: n_infections=2,last_infection_date=2020-10-12

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Nordjylland

text: Human

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Sjaelland

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Hovedstaden

text: Human

text: n_infections=2,last_infection_id=hCoV-19/Denmark/DCGC-130816/2021

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Sjaelland

text: Human

text: n_infections=2,last_infection_date=2021-12-13

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Syddanmark

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

characteristic: host description

text: not provided

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: not provided

text: not provided

text: not provided


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

text: Danish Covid-19 Genome Consortium

text: Original

text: Denmark

text: Syddanmark

text: Human

text: n_infections=2,last_infection_date=2022-02-07

text: not provided

text: Homo sapiens

text: not provided

characteristic: host sex

text: not provided

characteristic: host subject id

text: not provided

characteristic: isolate

characteristic: organism

characteristic: sample capture status


characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: collecting institution

characteristic: collection date

text: Danish Covid-19 Genome Consortium

characteristic: collector name

text: Original

characteristic: description

text: Denmark

characteristic: geographic location (country and/or sea)

text: Syddanmark

text: Human

text: n_infections=2,last_infection_date=2020-08-24

text: not provided

text: Homo sapiens

text: not provided

text: not provided

text: not provided

characteristic: title