characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Bacteroidales bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188235_bin.45_metaWRAP_v1.3_MAG

characteristic: title


status: PUBLIC

tag: attribute

characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

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text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR7188235 of study SRP148527.

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

unit: DD

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Lachnospiraceae bacterium

text: Exploring the correlation between gut microbiota and feed efficiency in pigs

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188235_bin.48_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

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text: metaSPAdes v3.15.3

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characteristic: completeness software

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text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

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text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

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text: pig gut metagenome

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text: uncultured Clostridia bacterium

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text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188235_bin.49_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

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text: metaSPAdes v3.15.3

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text: EMG broker account, EMBL-EBI

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text: Pig digestive system

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characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Prevotellaceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188235_bin.50_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

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text: metaSPAdes v3.15.3

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characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

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text: uncultured Bacteroidales bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188235_bin.52_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

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characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

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characteristic: completeness score

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text: Pig digestive system

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text: Feces

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characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Prevotella sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188235_bin.53_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

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text: metaSPAdes v3.15.3

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characteristic: completeness software

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characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

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text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

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text: pig gut metagenome

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text: Desulfovibrio piger

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characteristic: project name

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text: Illumina HiSeq 2500

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text: multi-marker approach

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text: Metagenome-assembled genome: SRR7188235_bin.55_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

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characteristic: External Id

text: EMG

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characteristic: SRA accession

characteristic: Submitter Id

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text: metaSPAdes v3.15.3

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text: metaWRAP v1.3

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text: EMG broker account, EMBL-EBI

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text: Pig digestive system

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text: Feces

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characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Bacteroidales bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188235_bin.57_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

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text: metaSPAdes v3.15.3

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characteristic: completeness software

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characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

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text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

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text: Illumina HiSeq 2500

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text: Metagenome-assembled genome: SRR7188235_bin.6_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

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text: metaSPAdes v3.15.3

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text: pig gut metagenome

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text: uncultured Faecalibacterium sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188235_bin.63_metaWRAP_v1.3_MAG


characteristic: ENA first public

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text: EMG

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characteristic: completeness software

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text: Colon

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text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

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text: pig gut metagenome

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text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

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text: Metagenome-assembled genome: SRR7188235_bin.7_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

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characteristic: SRA accession

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text: metaSPAdes v3.15.3

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text: pig gut metagenome

text: pig gut metagenome

text: uncultured Prevotellaceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188235_bin.9_metaWRAP_v1.3_MAG


characteristic: ENA first public

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characteristic: External Id

text: EMG

characteristic: INSDC center alias

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text: metaSPAdes v3.15.3

text: metaWRAP v1.3

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characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR7188236 of study SRP148527.

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

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text: pig gut metagenome

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text: uncultured Alphaproteobacteria bacterium

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characteristic: project name

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text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

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text: Metagenome-assembled genome: SRR7188236_bin.12_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

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characteristic: External Id

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characteristic: INSDC center alias

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characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

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characteristic: collection date

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text: Feces

text: China

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text: metagenome-assembled genome

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text: pig gut metagenome

text: uncultured Bacteroidales bacterium

text: Illumina HiSeq 2500

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text: Metagenome-assembled genome: SRR7188236_bin.13_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

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text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

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characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

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text: pig gut metagenome

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text: uncultured Spirochaetales bacterium

characteristic: organism

text: Exploring the correlation between gut microbiota and feed efficiency in pigs

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188236_bin.15_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

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characteristic: External Id

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text: metaSPAdes v3.15.3

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text: Pig digestive system

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text: Feces

text: China

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text: pig gut metagenome

text: pig gut metagenome

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text: Illumina HiSeq 2500

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text: Metagenome-assembled genome: SRR7188236_bin.16_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

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characteristic: External Id

text: EMG

characteristic: INSDC center alias

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characteristic: completeness software

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characteristic: environment (biome)

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text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

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characteristic: investigation type

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text: Illumina HiSeq 2500

characteristic: sequencing method

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text: Metagenome-assembled genome: SRR7188236_bin.18_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

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characteristic: External Id

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characteristic: INSDC center alias

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characteristic: INSDC center name

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text: pig gut metagenome

text: pig gut metagenome

text: uncultured Prevotellaceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188236_bin.2_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

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characteristic: External Id

text: EMG

characteristic: INSDC center alias

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text: metaSPAdes v3.15.3

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characteristic: completeness software

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characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

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text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188236_bin.21_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

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characteristic: External Id

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characteristic: assembly quality

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characteristic: assembly software

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text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Ruminococcus sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188236_bin.22_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

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characteristic: completeness software

characteristic: contamination score

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characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

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characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188236_bin.25_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

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characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

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characteristic: SRA accession

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characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

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characteristic: broker name

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characteristic: completeness score

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characteristic: description

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text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Treponema sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188236_bin.26_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

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characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: Succinatimonas hippei

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188236_bin.27_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188236_bin.28_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR7188236 of study SRP148527.

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188236_bin.29_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Bacteroidales bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188236_bin.3_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Spirochaetales bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188236_bin.31_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188236_bin.32_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: Candidatus Methanomethylophilus alvus

characteristic: organism

text: Exploring the correlation between gut microbiota and feed efficiency in pigs

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188236_bin.33_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Fibrobacter sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188236_bin.34_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Bacteroidales bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188236_bin.35_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188236_bin.37_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188236_bin.4_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Prevotellaceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188236_bin.40_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Bacillales bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188236_bin.41_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188236_bin.43_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188236_bin.44_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR7188236 of study SRP148527.

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Bacteroidales bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188236_bin.46_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Bacteroidales bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188236_bin.47_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188236_bin.49_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Spirochaetales bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188236_bin.50_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Lachnospiraceae bacterium

text: Exploring the correlation between gut microbiota and feed efficiency in pigs

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188236_bin.53_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Bacteroidales bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188236_bin.54_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured cyanobacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188236_bin.56_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Lentisphaeraceae bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188236_bin.57_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Verrucomicrobia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188236_bin.58_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Treponema sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188236_bin.59_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Elusimicrobia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188236_bin.6_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR7188237 of study SRP148527.

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188237_bin.1_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Veillonellaceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188237_bin.13_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188237_bin.15_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188237_bin.18_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188237_bin.20_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Treponema sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188237_bin.21_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Bacteroidales bacterium

characteristic: organism

text: Exploring the correlation between gut microbiota and feed efficiency in pigs

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188237_bin.22_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Prevotella sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188237_bin.30_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188237_bin.31_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Prevotellaceae bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188237_bin.32_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Bacteroidales bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188237_bin.34_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188237_bin.38_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Bacteroidales bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188237_bin.4_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR7188237 of study SRP148527.

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188237_bin.40_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Treponema sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188237_bin.41_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Prevotella sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188237_bin.42_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188237_bin.45_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Succinatimonas sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188237_bin.46_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Alphaproteobacteria bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188237_bin.49_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Selenomonas sp.

text: Exploring the correlation between gut microbiota and feed efficiency in pigs

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188237_bin.54_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Bacteroidales bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188237_bin.55_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Eubacterium sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188237_bin.56_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188237_bin.57_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Eubacterium sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188237_bin.6_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Ruminococcus sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188237_bin.60_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR7188237 of study SRP148527.

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188237_bin.9_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC center alias

text: laboratory of genomics and metagenomics, institute of microbiology, university hospital centre and university of lausanne, switzerland

text: public

tag: Namespace:Laboratory of genomics and metagenomics, Institute of Microbiology, University Hospital Centre and University of Lausanne, Switzerland

text: Swiss Institute of Bioinformatics, Quartier Sorge, Batiment Amphipole, CH-1015, Lausanne

text: EHNV, CH-1400 Yverdon, Switzerland

characteristic: collecting institution

text: Trestan Pillonel, Damien Jacot, Sébastien Aeby, Gilbert Greub, Claire Bertelli

characteristic: collector name

text: Switzerland

text: VD

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VD-CHUV-GEN12245/2022

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: active surveillance in response to outbreak

characteristic: sample capture status

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

text: Laboratory of genomics and metagenomics, Institute of Microbiology, University Hospital Centre and University of Lausanne, Switzerland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: broker name

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collection date

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VD

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN12211/2022


characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC center alias

text: public

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collecting institution

characteristic: collector name

text: Switzerland

text: VD

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN12269/2022


characteristic: ENA first public

characteristic: ENA last update

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: EHNV, CH-1400 Yverdon, Switzerland

text: Switzerland

text: VD

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VD-CHUV-GEN12268/2022

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC center alias

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: broker name

text: EHNV, CH-1400 Yverdon, Switzerland

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VD

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN12244/2022


characteristic: ENA first public

characteristic: ENA last update

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: CHUV, CH-1011 Lausanne, Switzerland

text: Switzerland

text: VD

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN12219/2022


characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC center alias

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: CHUV, CH-1011 Lausanne, Switzerland

text: Switzerland

text: VD

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VD-CHUV-GEN12255/2022

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: broker name

text: CHUV, CH-1011 Lausanne, Switzerland

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VD

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN12237/2022


characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC center alias

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: EHNV, CH-1400 Yverdon, Switzerland

text: Switzerland

text: VD

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN12259/2022


characteristic: ENA first public

characteristic: ENA last update

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: CHUV, CH-1011 Lausanne, Switzerland

text: Switzerland

text: VD

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

characteristic: host subject id

text: hCoV-19/Switzerland/VD-CHUV-GEN12236/2022

characteristic: isolate

characteristic: organism

characteristic: sample capture status

characteristic: title


characteristic: ENA-CHECKLIST

characteristic: External Id

characteristic: GISAID Accession ID

characteristic: INSDC center alias

text: public

characteristic: SRA accession

characteristic: Submitter Id

characteristic: broker name

text: EHNV, CH-1400 Yverdon, Switzerland

characteristic: collecting institution

characteristic: collection date

characteristic: collector name

text: Switzerland

characteristic: geographic location (country and/or sea)

text: VD

text: Human

text: restricted access

text: Homo sapiens

text: restricted access

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN12223/2022


characteristic: ENA first public

characteristic: ENA last update

text: laboratory of genomics and metagenomics, institute of microbiology, university hospital centre and university of lausanne, switzerland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: CHUV, CH-1011 Lausanne, Switzerland

text: Switzerland

text: VD

characteristic: geographic location (region and locality)

text: Human

characteristic: host common name

text: restricted access

characteristic: host health state

text: Homo sapiens

characteristic: host scientific name

text: restricted access

characteristic: host sex

text: restricted access

text: hCoV-19/Switzerland/VD-CHUV-GEN12248/2022