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text: EMG

characteristic: INSDC center alias

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characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Treponema sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188233_bin.16_metaWRAP_v1.3_MAG


status: PUBLIC

tag: attribute

characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR7188233 of study SRP148527.

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

unit: DD

characteristic: geographic location (latitude)

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text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

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text: uncultured Bacteroidales bacterium

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text: Exploring the correlation between gut microbiota and feed efficiency in pigs

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188233_bin.17_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

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text: metaSPAdes v3.15.3

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characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Bacteroidales bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188233_bin.18_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

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characteristic: External Id

text: EMG

characteristic: INSDC center alias

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characteristic: completeness software

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characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

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characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

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characteristic: investigation type

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text: Illumina HiSeq 2500

characteristic: sequencing method

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characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188233_bin.19_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

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characteristic: geographic location (country and/or sea)

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text: pig gut metagenome

text: pig gut metagenome

text: uncultured Streptococcus sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188233_bin.21_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

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characteristic: External Id

text: EMG

characteristic: INSDC center alias

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characteristic: completeness software

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characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

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characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

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text: uncultured Campylobacter sp.

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text: Illumina HiSeq 2500

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text: Metagenome-assembled genome: SRR7188233_bin.22_metaWRAP_v1.3_MAG

characteristic: title


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characteristic: SRA accession

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characteristic: assembly quality

text: metaSPAdes v3.15.3

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characteristic: geographic location (country and/or sea)

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text: pig gut metagenome

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text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188233_bin.23_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

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text: EMG

characteristic: INSDC center alias

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text: metaSPAdes v3.15.3

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characteristic: completeness software

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text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

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characteristic: environment (material)

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characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

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characteristic: investigation type

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text: Illumina HiSeq 2500

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text: Metagenome-assembled genome: SRR7188233_bin.24_metaWRAP_v1.3_MAG

characteristic: title


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text: pig gut metagenome

text: pig gut metagenome

text: uncultured Bacteroidales bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188233_bin.26_metaWRAP_v1.3_MAG


characteristic: ENA first public

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characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

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characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

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characteristic: investigation type

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text: Metagenome-assembled genome: SRR7188233_bin.27_metaWRAP_v1.3_MAG

characteristic: title


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text: pig gut metagenome

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text: uncultured Clostridia bacterium

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text: multi-marker approach

text: Metagenome-assembled genome: SRR7188233_bin.28_metaWRAP_v1.3_MAG


characteristic: ENA first public

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text: uncultured Verrucomicrobia bacterium

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text: Illumina HiSeq 2500

characteristic: sequencing method

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text: Metagenome-assembled genome: SRR7188233_bin.3_metaWRAP_v1.3_MAG

characteristic: title


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text: uncultured Clostridium sp.

text: Illumina HiSeq 2500

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text: Metagenome-assembled genome: SRR7188233_bin.30_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

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text: metaWRAP v1.3

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characteristic: completeness software

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characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

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characteristic: sequencing method

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text: Metagenome-assembled genome: SRR7188233_bin.32_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

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text: Feces

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text: pig gut metagenome

text: pig gut metagenome

text: uncultured Bacteroidales bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188233_bin.33_metaWRAP_v1.3_MAG


characteristic: ENA first public

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text: EMG

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text: metaSPAdes v3.15.3

text: metaWRAP v1.3

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characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR7188233 of study SRP148527.

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

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characteristic: sequencing method

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characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188233_bin.35_metaWRAP_v1.3_MAG

characteristic: title


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text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188233_bin.36_metaWRAP_v1.3_MAG


characteristic: ENA first public

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text: EMG

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characteristic: completeness software

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characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

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characteristic: environment (material)

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characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

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text: Illumina HiSeq 2500

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text: Metagenome-assembled genome: SRR7188233_bin.37_metaWRAP_v1.3_MAG

characteristic: title


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text: metaSPAdes v3.15.3

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text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188233_bin.41_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

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characteristic: External Id

text: EMG

characteristic: INSDC center alias

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text: metaWRAP v1.3

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characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

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characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

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characteristic: project name

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text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188233_bin.43_metaWRAP_v1.3_MAG

characteristic: title


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characteristic: assembly quality

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characteristic: broker name

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text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Bacteroidales bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188233_bin.45_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

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characteristic: External Id

text: EMG

characteristic: INSDC center alias

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text: metaWRAP v1.3

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characteristic: completeness software

characteristic: contamination score

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characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

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text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188233_bin.46_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

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characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

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characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Bacteroidales bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188233_bin.49_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188233_bin.50_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188233_bin.51_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Prevotella sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188233_bin.52_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188233_bin.53_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Bacteroidales bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188233_bin.57_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR7188233 of study SRP148527.

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Alphaproteobacteria bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188233_bin.58_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: organism

text: Exploring the correlation between gut microbiota and feed efficiency in pigs

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188233_bin.60_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188233_bin.65_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188233_bin.7_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188233_bin.71_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Prevotellaceae bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188233_bin.9_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR7188234 of study SRP148527.

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Treponema sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188234_bin.1_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Coprococcus sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188234_bin.11_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

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text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

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characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188234_bin.12_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: Lactobacillus johnsonii

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188234_bin.18_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Treponema sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188234_bin.19_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Prevotella sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188234_bin.20_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188234_bin.21_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Methanomassiliicoccaceae bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188234_bin.22_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Treponema sp.

text: Exploring the correlation between gut microbiota and feed efficiency in pigs

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188234_bin.26_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Prevotellaceae bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188234_bin.28_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188234_bin.30_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188234_bin.31_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR7188234 of study SRP148527.

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188234_bin.33_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188234_bin.35_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Bacteroidales bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188234_bin.37_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Mollicutes bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188234_bin.39_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Prevotella sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188234_bin.40_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Bacteroidales bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188234_bin.44_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Prevotella sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188234_bin.49_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Lachnospiraceae bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188234_bin.5_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR7188235 of study SRP148527.

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Lactobacillus sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188235_bin.1_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: Phascolarctobacterium succinatutens

characteristic: organism

text: Exploring the correlation between gut microbiota and feed efficiency in pigs

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188235_bin.11_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Bacteroidales bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188235_bin.12_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: Treponema succinifaciens

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188235_bin.13_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: Megasphaera elsdenii

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188235_bin.14_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Veillonellaceae bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188235_bin.16_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Mollicutes bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188235_bin.17_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Prevotellaceae bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188235_bin.18_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188235_bin.19_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Prevotella sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188235_bin.20_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Prevotella sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188235_bin.21_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Clostridia bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188235_bin.22_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Myxococcales bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188235_bin.23_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR7188235 of study SRP148527.

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Mitsuokella sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188235_bin.26_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: Catenibacterium mitsuokai

text: Exploring the correlation between gut microbiota and feed efficiency in pigs

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188235_bin.27_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Dialister sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188235_bin.28_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Prevotella sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188235_bin.29_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Bacteroidales bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188235_bin.30_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188235_bin.32_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Prevotella sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188235_bin.34_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Clostridia bacterium

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188235_bin.35_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: Many fragments with little to no review of assembly other than reporting of standard assembly statistics

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Olsenella sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188235_bin.36_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

text: MaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Prevotella sp.

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188235_bin.4_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Erysipelotrichaceae bacterium

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188235_bin.40_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: Escherichia coli

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188235_bin.42_metaWRAP_v1.3_MAG


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

text: public

text: metaSPAdes v3.15.3

text: metaWRAP v1.3

text: EMG broker account, EMBL-EBI

text: CheckM

characteristic: completeness software

characteristic: contamination score

text: This sample represents a Third Party Annotation (TPA) Metagenome-Assembled Genome (MAG) assembled from the metagenomic run SRR7188235 of study SRP148527.

text: Pig digestive system

characteristic: environment (biome)

text: Colon

characteristic: environment (feature)

text: Feces

characteristic: environment (material)

text: China

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: metagenome-assembled genome

characteristic: investigation type

text: pig gut metagenome

characteristic: isolation source

text: pig gut metagenome

characteristic: metagenomic source

text: uncultured Solobacterium sp.

characteristic: organism

characteristic: project name

characteristic: sample derived from

text: Illumina HiSeq 2500

characteristic: sequencing method

text: multi-marker approach

characteristic: taxonomic identity marker

text: Metagenome-assembled genome: SRR7188235_bin.43_metaWRAP_v1.3_MAG

characteristic: title


characteristic: ENA first public

characteristic: ENA last update

characteristic: ENA-CHECKLIST

characteristic: External Id

text: EMG

characteristic: INSDC center alias

text: EMG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: assembly quality

text: metaSPAdes v3.15.3

characteristic: assembly software

characteristic: binning parameters

text: metaWRAP v1.3

characteristic: binning software

text: EMG broker account, EMBL-EBI

characteristic: broker name

characteristic: collection date

characteristic: common name

characteristic: completeness score

text: CheckM

characteristic: description

text: Pig digestive system

text: Colon

text: Feces

text: China

characteristic: geographic location (country and/or sea)

text: metagenome-assembled genome

text: pig gut metagenome

text: pig gut metagenome

text: uncultured Fibrobacter sp.

text: Exploring the correlation between gut microbiota and feed efficiency in pigs

text: Illumina HiSeq 2500

text: multi-marker approach

text: Metagenome-assembled genome: SRR7188235_bin.44_metaWRAP_v1.3_MAG