text: University of California San Diego

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: yes

text: no

text: no

text: no

text: not collected

text: not collected

text: not collected

text: yes

text: not collected

text: not collected

text: hospital

text: daily

text: not collected

text: not collected

text: not collected

text: vaginal

text: ucsd NICU, neonate, week 2, milk feed

text: Control

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: daily

text: Animal secretion

text: breast milk

text: hispanic, white

text: MBM

text: daily

text: not collected

text: not collected

text: USA: Southern CA

characteristic: gravida

text: no

text: not collected

text: not collected

text: Homo sapiens

text: UBERON:breast

text: yes

text: yes

text: no

text: no

text: not collected

text: NICU

text: no

text: FALSE

text: True, requiring flagyl

text: True, cervical dilation

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: no

text: metagenome

text: yes

text: yes

text: daily

text: yes

text: yes

text: no

text: CPAP

text: not collected

text: not collected

text: milk

text: human milk metagenome

text: female

text: never

text: daily

text: not applicable

text: not applicable

text: not applicable

text: no

text: rarely

text: not collected

text: Timepoint 2

text: daily

text: not applicable

text: FALSE

text: not applicable

text: MBM

text: Mothers

text: dog

text: not applicable

text: daily


status: PUBLIC

characteristic: External Id

text: University of California San Diego

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIMS.me

characteristic: NCBI submission package

text: yes

tag: attribute

text: no

text: no

text: no

text: not collected

text: not collected

text: not collected

text: yes

text: not collected

text: not collected

text: hospital

characteristic: broad-scale environmental context

text: daily

text: not collected

text: not collected

text: not collected

text: vaginal

text: ucsd NICU, neonate, week 2, stool

characteristic: description

text: Control

characteristic: diagnosis

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: daily

characteristic: egg

text: Animal distal gut

text: feces

text: hispanic, white

characteristic: ethnicity

text: MBM

text: daily

characteristic: fish

text: not collected

text: not collected

text: USA: Southern CA

characteristic: geographic location

text: no

text: not collected

text: not collected

text: Homo sapiens

characteristic: host

text: UBERON:feces

text: yes

text: yes

text: no

text: no

characteristic: ivh

text: not applicable

text: not collected

characteristic: latitude and longitude

text: NICU

characteristic: local-scale environmental context

text: no

text: FALSE

text: True, requiring flagyl

text: True, cervical dilation

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: no

text: metagenome

text: yes

text: yes

text: daily

text: yes

text: yes

text: no

text: CPAP

text: not collected

text: not collected

text: stool

text: human gut metagenome

text: female

text: never

text: daily

text: not applicable

text: not applicable

text: not applicable

text: no

text: rarely

text: not collected

text: Timepoint 2

text: MIMS Environmental/Metagenome sample from metagenome

text: daily

text: not applicable

text: FALSE

text: not applicable

text: not applicable

text: Fecal

text: dog

text: not applicable

text: daily


text: University of California San Diego

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: yes

text: no

text: no

text: no

text: not collected

text: not collected

text: yes

text: no

text: no

text: hospital

text: rarely

text: caesarean

text: ucsd NICU, neonate, week 2, milk feed

text: Control

text: weekly

text: Animal secretion

text: breast milk

text: asian

text: MBM

text: weekly

text: no

text: USA: Southern CA

characteristic: gravida

text: current

text: no

text: Homo sapiens

text: UBERON:breast

text: no

text: no

text: no

text: no

text: not applicable

text: not collected

text: NICU

text: no

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: TRUE

text: True, severe

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: no

text: metagenome

text: no

text: no

text: monthly

text: yes

text: yes

text: no

text: RA

text: milk

text: human milk metagenome

text: female

text: weekly

text: weekly

text: not applicable

text: not applicable

text: not applicable

text: no

text: rarely

text: no

text: Timepoint 2

text: rarely

text: not applicable

text: FALSE

text: not applicable

text: MBM

text: Mothers

text: not collected

text: not applicable

text: monthly


characteristic: External Id

text: University of California San Diego

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: yes

text: no

text: no

text: no

text: not collected

text: not collected

text: yes

text: no

text: no

text: hospital

text: rarely

text: caesarean

text: ucsd NICU, neonate, week 2, stool

text: Control

text: weekly

text: Animal distal gut

text: feces

text: asian

text: MBM

text: weekly

text: no

text: USA: Southern CA

text: current

text: no

text: Homo sapiens

text: UBERON:feces

text: no

text: no

text: no

text: no

text: not applicable

text: not applicable

text: not collected

text: NICU

text: no

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: TRUE

text: True, severe

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: no

text: metagenome

text: no

text: no

text: monthly

text: yes

text: yes

text: no

text: RA

text: stool

text: human gut metagenome

text: female

text: weekly

text: weekly

text: not applicable

text: not applicable

text: not applicable

text: no

text: rarely

text: no

text: Timepoint 2

text: rarely

text: not applicable

text: FALSE

text: not applicable

text: not applicable

text: Fecal

text: not collected

text: not applicable

text: monthly


text: University of California San Diego

text: live

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIMS.me

characteristic: NCBI submission package

text: yes

text: yes

text: no

text: no

text: not collected

text: not collected

text: yes

text: yes

text: no

text: hospital

characteristic: broad-scale environmental context

text: never

text: caesarean

text: ucsd NICU, neonate, week 2, milk feed

text: Asthma

text: weekly

text: Animal secretion

text: breast milk

text: asian

text: DBM

text: weekly

text: no

text: USA: Southern CA

text: current

text: EFC 24 +MBM

text: no

text: Homo sapiens

text: UBERON:breast

text: no

text: no

text: no

text: no

text: not applicable

text: not collected

text: NICU

text: no

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: True, selective

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: asthma (childhood), eczema

text: no

text: metagenome

text: yes

text: no

text: daily

text: no

text: yes

text: no

text: RA

text: milk

text: human milk metagenome

text: male

text: rarely

text: monthly

text: not applicable

text: not applicable

text: not applicable

text: asthma

text: no

text: rarely

text: no

text: Timepoint 2

text: daily

text: not applicable

text: FALSE

text: not applicable

text: DBM

text: Donor

text: not applicable

text: not applicable

text: weekly


text: University of California San Diego

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: yes

text: yes

text: no

text: no

text: not collected

text: not collected

text: yes

text: yes

text: no

text: hospital

text: never

text: caesarean

text: ucsd NICU, neonate, week 2, stool

characteristic: description

text: Asthma

characteristic: diagnosis

text: weekly

characteristic: egg

text: Animal distal gut

text: feces

text: asian

text: DBM

text: weekly

text: no

text: USA: Southern CA

text: current

text: EFC 24 +MBM

text: no

text: Homo sapiens

text: UBERON:feces

text: no

text: no

text: no

text: no

text: not applicable

text: not applicable

text: not collected

text: NICU

text: no

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: True, selective

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: asthma (childhood), eczema

text: no

text: metagenome

text: yes

text: no

text: daily

text: no

text: yes

text: no

text: RA

text: stool

text: human gut metagenome

text: male

text: rarely

text: monthly

text: not applicable

text: not applicable

text: not applicable

text: asthma

text: no

text: rarely

text: no

text: Timepoint 2

text: daily

text: not applicable

text: FALSE

text: not applicable

text: not applicable

text: Fecal

text: not applicable

text: not applicable

text: weekly


text: University of California San Diego

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: yes

text: yes

text: no

text: no

text: not collected

text: yes

text: yes

text: yes

text: hospital

text: rarely

text: allergyic rhinitis

text: caesarean

text: ucsd NICU, neonate, week 2, milk feed

text: Control

text: daily

text: Animal secretion

text: breast milk

text: hispanic, white

characteristic: ethnicity

text: MBM and DBM

text: daily

characteristic: fish

text: no

text: USA: Southern CA

characteristic: geographic location

text: no

text: EFC 24 (with MBM when available)

text: no

text: Homo sapiens

text: UBERON:breast

text: no

text: no

text: no

text: no

text: not applicable

text: not collected

text: NICU

text: no

text: FALSE

text: FALSE

text: FALSE

text: True, gestational

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: yes

text: metagenome

text: yes

text: no

text: daily

text: yes

text: yes

text: no

text: RA

text: not collected

text: not collected

text: milk

text: human milk metagenome

text: male

text: never

text: never

text: allergic rhinitis, allergy (penicillin, peanut)

text: not applicable

text: no

text: never

text: no

text: Timepoint 2

text: daily

text: A

text: FALSE

text: DBM

text: Mothers

text: dog

text: not applicable

text: daily


text: University of California San Diego

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: yes

text: yes

text: no

text: no

text: not collected

text: yes

text: yes

text: yes

text: hospital

text: rarely

text: allergyic rhinitis

text: caesarean

text: ucsd NICU, neonate, week 2, stool

text: Control

text: daily

text: Animal distal gut

text: feces

text: hispanic, white

text: MBM and DBM

text: daily

text: no

text: USA: Southern CA

text: no

text: EFC 24 (with MBM when available)

text: no

text: Homo sapiens

characteristic: host

text: UBERON:feces

text: no

text: no

text: no

text: no

text: not applicable

characteristic: ivh

text: not applicable

text: not collected

characteristic: latitude and longitude

text: NICU

text: no

text: FALSE

text: FALSE

text: FALSE

text: True, gestational

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: yes

text: metagenome

text: yes

text: no

text: daily

text: yes

text: yes

text: no

text: RA

text: not collected

text: not collected

text: stool

text: human gut metagenome

text: male

text: never

text: never

text: not applicable

text: no

text: never

text: no

text: Timepoint 2

text: daily

text: A

text: FALSE

text: not applicable

text: Fecal

text: dog

text: not applicable

text: daily


text: University of California San Diego

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: no

text: yes

text: no

text: yes

text: not collected

text: not collected

text: yes

text: no

text: yes

text: hospital

text: weekly

text: vaginal

text: ucsd NICU, neonate, week 2, milk feed

text: Control

text: weekly

text: Animal secretion

text: breast milk

text: hispanic, white

text: MBM and DBM

text: weekly

text: no

text: USA: Southern CA

text: no

text: EFC 22 + MBM

text: no

text: Homo sapiens

text: UBERON:breast

text: no

text: no

text: no

text: no

text: not applicable

text: not collected

text: NICU

characteristic: local-scale environmental context

text: no

text: FALSE

text: FALSE

text: True, premature cervical dilation

text: FALSE

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: yes

text: metagenome

text: yes

text: no

text: never

text: no

text: yes

text: yes

text: RA

text: milk

text: human milk metagenome

text: female

text: never

text: weekly

text: not applicable

text: no

text: rarely

text: no

text: Timepoint 2

text: never

text: not applicable

text: FALSE

text: not applicable

text: MBM

text: Mothers

text: not applicable

text: not applicable

text: weekly


characteristic: External Id

text: University of California San Diego

characteristic: INSDC first public

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: no

text: yes

text: no

text: yes

text: not collected

text: not collected

text: yes

text: no

text: yes

text: hospital

text: weekly

text: vaginal

text: ucsd NICU, neonate, week 2, stool

text: Control

text: weekly

text: Animal distal gut

text: feces

text: hispanic, white

text: MBM and DBM

text: weekly

text: no

text: USA: Southern CA

characteristic: gravida

text: no

text: EFC 22 + MBM

text: no

text: Homo sapiens

text: UBERON:feces

text: no

text: no

text: no

text: no

text: not applicable

text: not applicable

text: not collected

text: NICU

text: no

text: FALSE

text: FALSE

text: True, premature cervical dilation

text: FALSE

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: yes

text: metagenome

text: yes

text: no

text: never

text: no

text: yes

text: yes

text: RA

text: stool

text: human gut metagenome

text: female

text: never

text: weekly

text: not applicable

text: no

text: rarely

text: no

text: Timepoint 2

text: never

text: not applicable

text: FALSE

text: not applicable

text: not applicable

text: Fecal

text: not applicable

text: not applicable

text: weekly


text: University of California San Diego

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIMS.me

characteristic: NCBI submission package

text: yes

text: no

text: no

text: no

text: not collected

text: not collected

text: yes

text: yes

text: yes

text: hospital

text: weekly

text: caesarean

text: ucsd NICU, neonate, week 5, milk feed

text: Asthma

text: weekly

text: Animal secretion

text: breast milk

text: hispanic, white

text: MBM and PE

text: monthly

text: no

text: USA: Southern CA

text: current

text: MBM + PE30

text: no

text: Homo sapiens

text: UBERON:breast

text: no

text: no

text: no

text: no

text: not applicable

text: not collected

text: not collected

text: NICU

text: no

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: asthma, allergic rhinitis

text: yes

text: metagenome

text: no

text: no

text: weekly

text: no

text: yes

text: no

text: RA

text: milk

text: human milk metagenome

text: male

text: never

text: never

text: not applicable

text: not applicable

text: asthma

text: no

text: rarely

text: no

text: Timepoint 3

text: monthly

text: not applicable

text: FALSE

text: not applicable

text: not collected

text: Mothers

text: not applicable

text: not applicable

text: weekly


text: University of California San Diego

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: yes

text: no

text: no

text: no

text: not collected

text: not collected

text: yes

text: yes

text: yes

text: hospital

characteristic: broad-scale environmental context

text: weekly

text: caesarean

text: ucsd NICU, neonate, week 5, stool

characteristic: description

text: Asthma

characteristic: diagnosis

text: weekly

text: Animal distal gut

text: feces

text: hispanic, white

text: MBM and PE

text: monthly

text: no

text: USA: Southern CA

text: current

text: MBM + PE30

text: no

text: Homo sapiens

text: UBERON:feces

text: no

text: no

text: no

text: no

text: not applicable

text: not applicable

text: not collected

text: NICU

text: no

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: asthma, allergic rhinitis

text: yes

text: metagenome

text: no

text: no

text: weekly

text: no

text: yes

text: no

text: RA

text: stool

text: human gut metagenome

text: male

text: never

text: never

text: not applicable

text: not applicable

text: asthma

text: no

text: rarely

text: no

text: Timepoint 3

text: monthly

text: not applicable

text: FALSE

text: not applicable

text: not applicable

text: Fecal

text: not applicable

text: not applicable

text: weekly


text: University of California San Diego

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: yes

text: no

text: no

text: no

text: not collected

text: not collected

text: yes

text: yes

text: yes

text: hospital

text: daily

text: vaginal

text: ucsd NICU, neonate, week 6, milk feed

text: Control

text: daily

characteristic: egg

text: Animal secretion

text: breast milk

text: hispanic, white

characteristic: ethnicity

text: MBM

text: monthly

characteristic: fish

text: yes

text: USA: Southern CA

text: no

text: AR+MBM via G, AR via PO

text: no

text: Homo sapiens

text: UBERON:breast

text: yes

text: no

text: no

text: no

text: not applicable

text: not collected

text: NICU

text: no

text: FALSE

text: FALSE

text: FALSE

text: True, gestational

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: no

text: metagenome

text: no

text: no

text: weekly

text: yes

text: yes

text: no

text: RA

text: fully matured

text: fully matured

text: milk

text: human milk metagenome

text: male

text: never

text: monthly

text: not applicable

text: not applicable

text: not applicable

text: no

text: rarely

text: yes

text: Timepoint 3

text: weekly

text: not applicable

text: FALSE

text: not applicable

text: MBM

text: Mothers

text: dog

text: not applicable

text: daily


text: University of California San Diego

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: yes

text: no

text: no

text: no

text: not collected

text: not collected

text: yes

text: yes

text: yes

text: hospital

text: daily

text: vaginal

text: ucsd NICU, neonate, week 6, stool

text: Control

text: daily

text: Animal distal gut

text: feces

text: hispanic, white

text: MBM

text: monthly

text: yes

text: USA: Southern CA

characteristic: geographic location

text: no

text: AR+MBM via G, AR via PO

text: no

text: Homo sapiens

characteristic: host

text: UBERON:feces

text: yes

text: no

text: no

text: no

text: not applicable

characteristic: ivh

text: not applicable

text: not collected

text: NICU

text: no

text: FALSE

text: FALSE

text: FALSE

text: True, gestational

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: no

text: metagenome

text: no

text: no

text: weekly

text: yes

text: yes

text: no

text: RA

text: fully matured

text: fully matured

text: stool

text: human gut metagenome

text: male

text: never

text: monthly

text: not applicable

text: not applicable

text: not applicable

text: no

text: rarely

text: yes

text: Timepoint 3

text: weekly

text: not applicable

text: FALSE

text: not applicable

text: not applicable

text: Fecal

text: dog

text: not applicable

text: daily


text: University of California San Diego

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: yes

text: yes

text: no

text: no

text: not collected

text: not collected

text: yes

text: no

text: yes

text: hospital

text: daily

text: caesarean

text: ucsd NICU, neonate, week 6, milk feed

text: Asthma

text: daily

text: Animal secretion

text: breast milk

text: white

text: MBM and DBM

text: rarely

text: not collected

text: USA: Southern CA

text: past

text: not collected

text: not collected

text: Homo sapiens

text: UBERON:breast

text: no

text: no

text: yes

text: no

text: not collected

characteristic: latitude and longitude

text: NICU

text: no

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: asthma, allergy (antibiotics)

text: no

text: metagenome

text: yes

text: no

text: daily

text: yes

text: yes

text: no

text: CPAP

text: milk

text: human milk metagenome

text: male

text: never

text: monthly

text: not applicable

text: not applicable

text: not applicable

text: asthma

text: no

text: rarely

text: no

text: Timepoint 3

text: rarely

text: not applicable

text: FALSE

text: not applicable

text: MBM

text: Mothers

text: dog, cat

text: not applicable

text: daily


characteristic: External Id

text: University of California San Diego

characteristic: INSDC first public

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: yes

text: yes

text: no

text: no

text: not collected

text: not collected

text: yes

text: no

text: yes

text: hospital

text: daily

text: caesarean

text: ucsd NICU, neonate, week 6, stool

text: Asthma

text: daily

text: Animal distal gut

text: feces

text: white

text: MBM and DBM

text: rarely

text: not collected

text: USA: Southern CA

text: past

text: not collected

text: not collected

text: Homo sapiens

text: UBERON:feces

text: no

text: no

text: yes

text: no

text: not applicable

text: not collected

text: NICU

characteristic: local-scale environmental context

text: no

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: asthma, allergy (antibiotics)

text: no

text: metagenome

text: yes

text: no

text: daily

text: yes

text: yes

text: no

text: CPAP

text: stool

text: human gut metagenome

text: male

text: never

text: monthly

text: not applicable

text: not applicable

text: not applicable

text: asthma

text: no

text: rarely

text: no

text: Timepoint 3

text: rarely

text: not applicable

text: FALSE

text: not applicable

text: not applicable

text: Fecal

text: dog, cat

text: not applicable

text: daily


text: University of California San Diego

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIMS.me

text: yes

text: no

text: no

text: no

text: not collected

text: not collected

text: yes

text: yes

text: yes

text: hospital

text: weekly

text: allergic rhinitis

text: caesarean

text: ucsd NICU, neonate, week 3, milk feed

text: Asthma

text: weekly

text: Animal secretion

text: breast milk

text: mixed (hispanic and white)

text: MBM

text: weekly

text: no

text: USA: Southern CA

characteristic: gravida

text: no

text: MBM + PE30

text: no

text: Homo sapiens

text: UBERON:breast

text: no

text: no

text: no

text: no

text: not applicable

text: not collected

text: NICU

text: no

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: asthma, allergic rhinitis

text: no

text: metagenome

text: no

text: no

text: never

text: no

text: yes

text: no

text: RA

text: not collected

text: not collected

text: milk

text: human milk metagenome

text: female

text: weekly

text: weekly

text: not applicable

text: not applicable

text: not applicable

text: asthma

text: no

text: weekly

text: no

text: Timepoint 3

text: never

text: not applicable

text: FALSE

text: not applicable

text: MBM

text: Mothers

text: not applicable

text: not applicable

text: weekly


text: University of California San Diego

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

characteristic: NCBI submission package

text: no

text: yes

text: no

text: yes

text: not collected

text: yes

text: no

text: no

text: hospital

characteristic: broad-scale environmental context

text: weekly

text: vaginal

text: ucsd NICU, neonate, week 6, milk feed

characteristic: description

text: Control

text: not collected

text: not collected

text: not collected

text: not collected

text: daily

text: Animal secretion

text: breast milk

text: white

text: MBM and DBM

text: monthly

text: not collected

text: not collected

text: USA: Southern CA

text: no

text: not collected

text: not collected

text: Homo sapiens

text: UBERON:breast

text: no

text: no

text: yes

text: no

text: not collected

text: NICU

text: no

text: FALSE

text: FALSE

text: True, cervical insufficiency

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: yes

text: metagenome

text: no

text: yes

text: weekly

text: yes

text: yes

text: yes

text: CPAP

text: not collected

text: not collected

text: milk

text: human milk metagenome

text: female

text: never

text: never

text: not applicable

text: not applicable

text: no

text: rarely

text: not collected

text: Timepoint 3

text: weekly

text: not applicable

text: FALSE

text: not applicable

text: MBM

text: Mothers

text: dog

text: hydrocortisone

text: daily


text: University of California San Diego

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: no

text: yes

text: no

text: yes

text: not collected

text: yes

text: no

text: no

text: hospital

text: weekly

text: vaginal

text: ucsd NICU, neonate, week 6, stool

text: Control

characteristic: diagnosis

text: not collected

text: not collected

text: not collected

text: not collected

text: daily

characteristic: egg

text: Animal distal gut

text: feces

text: white

characteristic: ethnicity

text: MBM and DBM

text: monthly

text: not collected

text: not collected

text: USA: Southern CA

text: no

text: not collected

text: not collected

text: Homo sapiens

text: UBERON:feces

text: no

text: no

text: yes

text: no

text: not applicable

text: not collected

text: NICU

text: no

text: FALSE

text: FALSE

text: True, cervical insufficiency

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: yes

text: metagenome

text: no

text: yes

text: weekly

text: yes

text: yes

text: yes

text: CPAP

text: not collected

text: not collected

text: stool

text: human gut metagenome

text: female

text: never

text: never

text: not applicable

text: not applicable

text: no

text: rarely

text: not collected

text: Timepoint 3

text: weekly

text: not applicable

text: FALSE

text: not applicable

text: not applicable

text: Fecal

text: dog

text: hydrocortisone

text: daily


text: University of California San Diego

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: yes

text: yes

text: yes

text: yes

text: not collected

text: not collected

text: yes

text: no

text: no

text: hospital

text: daily

text: caesarean

text: ucsd NICU, neonate, week 6, milk feed

text: Asthma

text: monthly

text: Animal secretion

text: breast milk

text: mixed (white and black)

text: MBM and DBM

text: weekly

characteristic: fish

text: no

text: USA: Southern CA

characteristic: geographic location

text: no

text: EFC 22 (2/3) + MBM (1/3)

text: no

text: Homo sapiens

characteristic: host

text: UBERON:breast

text: no

text: no

text: no

text: no

text: not applicable

text: not collected

text: NICU

text: yes

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: asthma (childhood)

text: no

text: metagenome

text: yes

text: no

text: weekly

text: no

text: yes

text: no

text: RA

text: milk

text: human milk metagenome

text: male

text: monthly

text: monthly

text: not applicable

text: not applicable

text: not applicable

text: asthma

text: no

text: never

text: no

text: Timepoint 3

text: monthly

text: A

text: TRUE

text: DMB

text: Donor

text: not applicable

text: not applicable

text: daily


text: University of California San Diego

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: yes

text: yes

text: yes

text: yes

text: not collected

text: not collected

text: yes

text: no

text: no

text: hospital

text: daily

text: caesarean

text: ucsd NICU, neonate, week 6, stool

text: Asthma

text: monthly

text: Animal distal gut

text: feces

text: mixed (white and black)

text: MBM and DBM

text: weekly

text: no

text: USA: Southern CA

text: no

text: EFC 22 (2/3) + MBM (1/3)

text: no

text: Homo sapiens

text: UBERON:feces

text: no

text: no

text: no

text: no

text: not applicable

characteristic: ivh

text: not applicable

text: not collected

text: NICU

text: yes

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: asthma (childhood)

text: no

text: metagenome

text: yes

text: no

text: weekly

text: no

text: yes

text: no

text: RA

text: stool

text: human gut metagenome

text: male

text: monthly

text: monthly

text: not applicable

text: not applicable

text: not applicable

text: asthma

text: no

text: never

text: no

text: Timepoint 3

text: monthly

text: A

text: TRUE

text: not applicable

text: Fecal

text: not applicable

text: not applicable

text: daily


characteristic: External Id

text: University of California San Diego

characteristic: INSDC first public

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: yes

text: yes

text: yes

text: yes

text: yes

text: no

text: no

text: hospital

text: daily

text: caesarean

text: ucsd NICU, neonate, week 6, milk feed

text: Asthma

text: monthly

text: Animal secretion

text: breast milk

text: mixed (white and black)

text: MBM and DBM

text: weekly

text: no

text: USA: Southern CA

text: no

text: EFC (a little MBM)

text: yes

text: Homo sapiens

text: UBERON:breast

text: no

text: no

text: yes

text: no

text: not collected

characteristic: latitude and longitude

text: NICU

text: yes

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: asthma (childhood)

text: no

text: metagenome

text: yes

text: no

text: weekly

text: no

text: yes

text: yes

text: HFNC

text: milk

text: human milk metagenome

text: male

text: monthly

text: monthly

text: not applicable

text: not applicable

text: not applicable

text: asthma

text: no

text: never

text: yes

text: Timepoint 3

text: monthly

text: B

text: TRUE

text: DBM/MBM

text: Mix Donor and Mother

text: not applicable

text: not applicable

text: daily


text: University of California San Diego

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIMS.me

text: yes

text: yes

text: yes

text: yes

text: yes

text: no

text: no

text: hospital

text: daily

text: caesarean

text: ucsd NICU, neonate, week 6, stool

text: Asthma

text: monthly

text: Animal distal gut

text: feces

text: mixed (white and black)

text: MBM and DBM

text: weekly

text: no

text: USA: Southern CA

text: no

text: EFC (a little MBM)

text: yes

text: Homo sapiens

text: UBERON:feces

text: no

text: no

text: yes

text: no

text: not applicable

text: not collected

text: NICU

characteristic: local-scale environmental context

text: yes

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: asthma (childhood)

text: no

text: metagenome

text: yes

text: no

text: weekly

text: no

text: yes

text: yes

text: HFNC

text: stool

text: human gut metagenome

text: male

text: monthly

text: monthly

text: not applicable

text: not applicable

text: not applicable

text: asthma

text: no

text: never

text: yes

text: Timepoint 3

text: monthly

text: B

text: TRUE

text: not applicable

text: Fecal

text: not applicable

text: not applicable

text: daily


text: University of California San Diego

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

characteristic: NCBI submission package

text: yes

text: no

text: no

text: no

text: not collected

text: not collected

text: yes

text: yes

text: yes

text: hospital

characteristic: broad-scale environmental context

text: rarely

text: unsure

text: caesarean

text: ucsd NICU, neonate, week 6, milk feed

text: Asthma

text: monthly

text: Animal secretion

text: breast milk

text: native hawaiian or pacific islander

text: MBM and EFC

text: rarely

text: no

text: USA: Southern CA

characteristic: gravida

text: no

text: EFC 24 (a little MBM)

text: no

text: Homo sapiens

text: UBERON:breast

text: no

text: no

text: no

text: no

text: not applicable

text: not collected

text: NICU

text: no

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: TRUE

text: TRUE

text: FALSE

text: asthma, allergic rhinitis

text: no

text: metagenome

text: no

text: no

text: monthly

text: no

text: yes

text: no

text: RA

text: milk

text: human milk metagenome

text: female

text: rarely

text: rarely

text: not applicable

text: not applicable

text: not applicable

text: asthma

text: no

text: never

text: no

text: Timepoint 3

text: monthly

text: A

text: TRUE

text: EFC

text: Formula

text: not applicable

text: not applicable

text: rarely


text: University of California San Diego

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: yes

text: no

text: no

text: no

text: not collected

text: not collected

text: yes

text: yes

text: yes

text: hospital

text: rarely

text: unsure

text: caesarean

text: ucsd NICU, neonate, week 6, stool

characteristic: description

text: Asthma

characteristic: diagnosis

text: monthly

characteristic: egg

text: Animal distal gut

text: feces

text: native hawaiian or pacific islander

text: MBM and EFC

text: rarely

text: no

text: USA: Southern CA

text: no

text: EFC 24 (a little MBM)

text: no

text: Homo sapiens

text: UBERON:feces

text: no

text: no

text: no

text: no

text: not applicable

text: not applicable

text: not collected

text: NICU

text: no

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: TRUE

text: TRUE

text: FALSE

text: asthma, allergic rhinitis

text: no

text: metagenome

text: no

text: no

text: monthly

text: no

text: yes

text: no

text: RA

text: stool

text: human gut metagenome

text: female

text: rarely

text: rarely

text: not applicable

text: not applicable

text: not applicable

text: asthma

text: no

text: never

text: no

text: Timepoint 3

text: monthly

text: A

text: TRUE

text: not applicable

text: Fecal

text: not applicable

text: not applicable

text: rarely


text: University of California San Diego

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: yes

text: no

text: no

text: no

text: not collected

text: not collected

text: yes

text: yes

text: yes

text: hospital

text: rarely

text: unsure

text: caesarean

text: ucsd NICU, neonate, week 6, milk feed

text: Asthma

text: monthly

text: Animal secretion

text: breast milk

text: native hawaiian or pacific islander

characteristic: ethnicity

text: MBM and Nutramagin

text: rarely

characteristic: fish

text: no

text: USA: Southern CA

characteristic: geographic location

text: no

text: EFC 24 (a little MBM)

text: no

text: Homo sapiens

text: UBERON:breast

text: no

text: no

text: no

text: no

text: not applicable

text: not collected

text: NICU

text: no

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: TRUE

text: TRUE

text: FALSE

text: asthma, allergic rhinitis

text: no

text: metagenome

text: no

text: no

text: monthly

text: no

text: yes

text: no

text: RA

text: milk

text: human milk metagenome

text: female

text: rarely

text: rarely

text: not applicable

text: not applicable

text: not applicable

text: asthma

text: no

text: never

text: no

text: Timepoint 3

text: monthly

text: B

text: TRUE

text: MBM

text: Mothers

text: not applicable

text: not applicable

text: rarely


text: University of California San Diego

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: yes

text: no

text: no

text: no

text: not collected

text: not collected

text: yes

text: yes

text: yes

text: hospital

text: rarely

text: unsure

text: caesarean

text: ucsd NICU, neonate, week 6, stool

text: Asthma

text: monthly

text: Animal distal gut

text: feces

text: native hawaiian or pacific islander

text: MBM and Nutramagin

text: rarely

text: no

text: USA: Southern CA

text: no

text: EFC 24 (a little MBM)

text: no

text: Homo sapiens

characteristic: host

text: UBERON:feces

text: no

text: no

text: no

text: no

text: not applicable

text: not applicable

text: not collected

text: NICU

text: no

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: TRUE

text: TRUE

text: FALSE

text: asthma, allergic rhinitis

text: no

text: metagenome

text: no

text: no

text: monthly

text: no

text: yes

text: no

text: RA

text: stool

text: human gut metagenome

text: female

text: rarely

text: rarely

text: not applicable

text: not applicable

text: not applicable

text: asthma

text: no

text: never

text: no

text: Timepoint 3

text: monthly

text: B

text: TRUE

text: not applicable

text: Fecal

text: not applicable

text: not applicable

text: rarely


characteristic: External Id

text: University of California San Diego

characteristic: INSDC first public

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: yes

text: no

text: no

text: no

text: not collected

text: not collected

text: yes

text: yes

text: yes

text: hospital

text: monthly

text: allergic rhinitis

text: caesarean

text: ucsd NICU, neonate, week 4, milk feed

text: Control

text: weekly

text: Animal secretion

text: breast milk

text: hispanic, white

text: MBM, DBM, and PE

text: monthly

text: no

text: USA: Southern CA

text: no

text: EFC 22 + MBM (50%)

text: no

text: Homo sapiens

text: UBERON:breast

text: no

text: no

text: no

text: no

text: not applicable

characteristic: ivh

text: not collected

text: NICU

text: no

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: TRUE

text: FALSE

text: TRUE

text: TRUE

text: TRUE

text: FALSE

text: yes

text: metagenome

text: no

text: no

text: daily

text: yes

text: yes

text: no

text: RA

text: milk

text: human milk metagenome

text: female

text: never

text: monthly

text: allergic rhinitis

text: allergic rhinitis

text: not applicable

text: no

text: never

text: no

text: Timepoint 3

text: monthly

text: A

text: TRUE

text: PE

text: Formula

text: dog

text: not applicable

text: daily


text: University of California San Diego

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIMS.me

text: yes

text: no

text: no

text: no

text: not collected

text: not collected

text: yes

text: yes

text: yes

text: hospital

text: monthly

text: allergic rhinitis

text: caesarean

text: ucsd NICU, neonate, week 4, stool

text: Control

text: weekly

text: Animal distal gut

text: feces

text: hispanic, white

text: MBM, DBM, and PE

text: monthly

text: no

text: USA: Southern CA

text: no

text: EFC 22 + MBM (50%)

text: no

text: Homo sapiens

text: UBERON:feces

text: no

text: no

text: no

text: no

text: not applicable

text: not applicable

text: not collected

characteristic: latitude and longitude

text: NICU

text: no

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: TRUE

text: FALSE

text: TRUE

text: TRUE

text: TRUE

text: FALSE

text: yes

text: metagenome

text: no

text: no

text: daily

text: yes

text: yes

text: no

text: RA

text: stool

text: human gut metagenome

text: female

text: never

text: monthly

text: allergic rhinitis

text: allergic rhinitis

text: not applicable

text: no

text: never

text: no

text: Timepoint 3

text: monthly

text: A

text: TRUE

text: not applicable

text: Fecal

text: dog

text: not applicable

text: daily


text: University of California San Diego

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

characteristic: NCBI submission package

text: yes

text: no

text: no

text: no

text: not collected

text: not collected

text: yes

text: yes

text: yes

text: hospital

characteristic: broad-scale environmental context

text: monthly

text: allergic rhinitis

text: caesarean

text: ucsd NICU, neonate, week 6, milk feed

text: Control

text: weekly

text: Animal secretion

text: breast milk

text: hispanic, white

text: MBM and EFC

text: monthly

text: no

text: USA: Southern CA

text: no

text: EFC 22 + MBM (50%)

text: no

text: Homo sapiens

text: UBERON:breast

text: no

text: no

text: no

text: no

text: not applicable

text: not collected

text: NICU

characteristic: local-scale environmental context

text: no

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: TRUE

text: FALSE

text: TRUE

text: TRUE

text: TRUE

text: FALSE

text: yes

text: metagenome

text: no

text: no

text: daily

text: yes

text: yes

text: no

text: RA

text: milk

text: human milk metagenome

text: female

text: never

text: monthly

text: allergic rhinitis

text: allergic rhinitis

text: not applicable

text: no

text: never

text: no

text: Timepoint 3

text: monthly

text: B

text: TRUE

text: MBM

text: Mothers

text: dog

text: not applicable

text: daily


text: University of California San Diego

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: yes

text: no

text: no

text: no

text: not collected

text: not collected

text: yes

text: yes

text: yes

text: hospital

text: monthly

text: allergic rhinitis

text: caesarean

text: ucsd NICU, neonate, week 6, stool

characteristic: description

text: Control

characteristic: diagnosis

text: weekly

text: Animal distal gut

text: feces

text: hispanic, white

text: MBM and EFC

text: monthly

text: no

text: USA: Southern CA

characteristic: gravida

text: no

text: EFC 22 + MBM (50%)

text: no

text: Homo sapiens

text: UBERON:feces

text: no

text: no

text: no

text: no

text: not applicable

text: not applicable

text: not collected

text: NICU

text: no

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: TRUE

text: FALSE

text: TRUE

text: TRUE

text: TRUE

text: FALSE

text: yes

text: metagenome

text: no

text: no

text: daily

text: yes

text: yes

text: no

text: RA

text: stool

text: human gut metagenome

text: female

text: never

text: monthly

text: allergic rhinitis

text: allergic rhinitis

text: not applicable

text: no

text: never

text: no

text: Timepoint 3

text: monthly

text: B

text: TRUE

text: not applicable

text: Fecal

text: dog

text: not applicable

text: daily


text: University of California San Diego

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: yes

text: yes

text: no

text: no

text: not collected

text: not collected

text: yes

text: yes

text: not collected

text: hospital

text: weekly

text: caesarean

text: ucsd NICU, neonate, week 4, milk feed

text: Control

text: n

text: weekly

characteristic: egg

text: Animal secretion

text: breast milk

text: african american

characteristic: ethnicity

text: EFC

text: rarely

characteristic: fish

text: no

text: USA: Southern CA

text: no

text: EFC 22

text: no

text: Homo sapiens

text: UBERON:breast

text: no

text: no

text: no

text: no

text: not applicable

text: not collected

text: NICU

text: no

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: TRUE

text: TRUE

text: FALSE

text: yes

text: metagenome

text: yes

text: no

text: rarely

text: no

text: yes

text: no

text: RA

text: not collected

text: not collected

text: milk

text: human milk metagenome

text: female

text: never

text: never

text: no

text: rarely

text: no

text: Timepoint 3

text: monthly

text: A

text: FALSE

text: EFC

text: Formula

text: not applicable

text: not applicable

text: weekly


text: University of California San Diego

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: yes

text: yes

text: no

text: no

text: not collected

text: not collected

text: yes

text: yes

text: not collected

text: hospital

text: weekly

text: caesarean

text: ucsd NICU, neonate, week 4, stool

text: Control

text: n

text: weekly

text: Animal distal gut

text: feces

text: african american

text: EFC

text: rarely

text: no

text: USA: Southern CA

characteristic: geographic location

text: no

text: EFC 22

text: no

text: Homo sapiens

text: UBERON:feces

text: no

text: no

text: no

text: no

text: not applicable

text: not applicable

text: not collected

text: NICU

text: no

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: TRUE

text: TRUE

text: FALSE

text: yes

text: metagenome

text: yes

text: no

text: rarely

text: no

text: yes

text: no

text: RA

text: not collected

text: not collected

text: stool

text: human gut metagenome

text: female

text: never

text: never

text: no

text: rarely

text: no

text: Timepoint 3

text: monthly

text: A

text: FALSE

text: not applicable

text: Fecal

text: not applicable

text: not applicable

text: weekly


characteristic: External Id

text: University of California San Diego

characteristic: INSDC first public

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: yes

text: no

text: no

text: no

text: not collected

text: not collected

text: yes

text: no

text: no

text: hospital

text: daily

text: not collected

text: not collected

text: not collected

text: not collected

text: vaginal

text: ucsd NICU, neonate, week 5, milk feed

text: Asthma

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: weekly

text: Animal secretion

text: breast milk

text: hispanic, white

text: MBM

text: rarely

text: not collected

text: not collected

text: USA: Southern CA

text: past

text: not collected

text: not collected

text: Homo sapiens

characteristic: host

text: UBERON:breast

text: no

text: no

text: yes

text: yes

text: not collected

text: NICU

text: no

text: FALSE

text: FALSE

text: True, cervical insufficiency

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: asthma

text: yes

text: metagenome

text: no

text: yes

text: weekly

text: yes

text: yes

text: no

text: CPAP

text: not collected

text: not collected

text: milk

text: human milk metagenome

text: female

text: never

text: monthly

text: asthma

text: not applicable

text: not applicable

text: asthma

text: no

text: rarely

text: not collected

text: Timepoint 3

text: weekly

text: not applicable

text: FALSE

text: not applicable

text: MBM

text: Mothers

text: dog

text: hydrocortisone

text: rarely


text: University of California San Diego

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIMS.me

text: yes

text: no

text: no

text: no

text: not collected

text: not collected

text: yes

text: no

text: no

text: hospital

text: daily

text: not collected

text: not collected

text: not collected

text: not collected

text: vaginal

text: ucsd NICU, neonate, week 5, stool

text: Asthma

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: weekly

text: Animal distal gut

text: feces

text: hispanic, white

text: MBM

text: rarely

text: not collected

text: not collected

text: USA: Southern CA

text: past

text: not collected

text: not collected

text: Homo sapiens

text: UBERON:feces

text: no

text: no

text: yes

text: yes

characteristic: ivh

text: not applicable

text: not collected

text: NICU

text: no

text: FALSE

text: FALSE

text: True, cervical insufficiency

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: asthma

text: yes

text: metagenome

text: no

text: yes

text: weekly

text: yes

text: yes

text: no

text: CPAP

text: not collected

text: not collected

text: stool

text: human gut metagenome

text: female

text: never

text: monthly

text: asthma

text: not applicable

text: not applicable

text: asthma

text: no

text: rarely

text: not collected

text: Timepoint 3

text: weekly

text: not applicable

text: FALSE

text: not applicable

text: not applicable

text: Fecal

text: dog

text: hydrocortisone

text: rarely


text: University of California San Diego

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

characteristic: NCBI submission package

text: yes

text: no

text: no

text: no

text: not collected

text: not collected

text: not collected

text: yes

text: not collected

text: not collected

text: hospital

characteristic: broad-scale environmental context

text: daily

text: not collected

text: not collected

text: not collected

text: vaginal

text: ucsd NICU, neonate, week 6, milk feed

text: Control

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: daily

text: Animal secretion

text: breast milk

text: hispanic, white

text: DBM

text: daily

text: not collected

text: not collected

text: USA: Southern CA

text: no

text: not collected

text: not collected

text: Homo sapiens

text: UBERON:breast

text: no

text: no

text: no

text: no

text: not collected

characteristic: latitude and longitude

text: NICU

text: no

text: FALSE

text: True, requiring flagyl

text: True, cervical dilation

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: no

text: metagenome

text: yes

text: yes

text: daily

text: yes

text: yes

text: no

text: CPAP

text: not collected

text: not collected

text: milk

text: human milk metagenome

text: female

text: never

text: daily

text: not applicable

text: not applicable

text: not applicable

text: no

text: rarely

text: not collected

text: Timepoint 3

text: daily

text: not applicable

text: FALSE

text: not applicable

text: DBM

text: Donor

text: dog

text: not applicable

text: daily


text: University of California San Diego

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: yes

text: no

text: no

text: no

text: not collected

text: not collected

text: not collected

text: yes

text: not collected

text: not collected

text: hospital

text: daily

text: not collected

text: not collected

text: not collected

text: vaginal

text: ucsd NICU, neonate, week 6, stool

characteristic: description

text: Control

characteristic: diagnosis

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: not collected

text: daily

text: Animal distal gut

text: feces

text: hispanic, white

text: DBM

text: daily

text: not collected

text: not collected

text: USA: Southern CA

text: no

text: not collected

text: not collected

text: Homo sapiens

text: UBERON:feces

text: no

text: no

text: no

text: no

text: not applicable

text: not collected

text: NICU

characteristic: local-scale environmental context

text: no

text: FALSE

text: True, requiring flagyl

text: True, cervical dilation

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: no

text: metagenome

text: yes

text: yes

text: daily

text: yes

text: yes

text: no

text: CPAP

text: not collected

text: not collected

text: stool

text: human gut metagenome

text: female

text: never

text: daily

text: not applicable

text: not applicable

text: not applicable

text: no

text: rarely

text: not collected

text: Timepoint 3

text: daily

text: not applicable

text: FALSE

text: not applicable

text: not applicable

text: Fecal

text: dog

text: not applicable

text: daily


text: University of California San Diego

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: yes

text: no

text: no

text: no

text: not collected

text: not collected

text: yes

text: yes

text: yes

text: hospital

text: rarely

text: caesarean

text: ucsd NICU, neonate, week 6, milk feed

text: Control

text: weekly

characteristic: egg

text: Animal secretion

text: breast milk

text: asian

characteristic: ethnicity

text: MBM

text: weekly

text: no

text: USA: Southern CA

characteristic: gravida

text: current

text: no

text: Homo sapiens

text: UBERON:breast

text: no

text: no

text: no

text: no

text: not applicable

text: not collected

text: NICU

text: no

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: TRUE

text: True, severe

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: no

text: metagenome

text: no

text: no

text: monthly

text: yes

text: yes

text: no

text: RA

text: milk

text: human milk metagenome

text: female

text: weekly

text: weekly

text: not applicable

text: not applicable

text: not applicable

text: no

text: rarely

text: no

text: Timepoint 3

text: rarely

text: not applicable

text: FALSE

text: not applicable

text: MBM

text: Mothers

text: not collected

text: not applicable

text: monthly


text: University of California San Diego

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: yes

text: no

text: no

text: no

text: not collected

text: not collected

text: yes

text: yes

text: yes

text: hospital

text: rarely

text: caesarean

text: ucsd NICU, neonate, week 6, stool

text: Control

text: weekly

text: Animal distal gut

text: feces

text: asian

text: MBM

text: weekly

characteristic: fish

text: no

text: USA: Southern CA

text: current

text: no

text: Homo sapiens

text: UBERON:feces

text: no

text: no

text: no

text: no

text: not applicable

text: not applicable

text: not collected

text: NICU

text: no

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: TRUE

text: True, severe

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: no

text: metagenome

text: no

text: no

text: monthly

text: yes

text: yes

text: no

text: RA

text: stool

text: human gut metagenome

text: female

text: weekly

text: weekly

text: not applicable

text: not applicable

text: not applicable

text: no

text: rarely

text: no

text: Timepoint 3

text: rarely

text: not applicable

text: FALSE

text: not applicable

text: not applicable

text: Fecal

text: not collected

text: not applicable

text: monthly


characteristic: External Id

text: University of California San Diego

characteristic: INSDC first public

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: yes

text: yes

text: no

text: no

text: not collected

text: not collected

text: yes

text: yes

text: yes

text: hospital

text: never

text: caesarean

text: ucsd NICU, neonate, week 6, milk feed

text: Asthma

text: weekly

text: Animal secretion

text: breast milk

text: asian

text: MBM and PE or EFC

text: weekly

text: no

text: USA: Southern CA

characteristic: geographic location

text: current

text: EFC 24 +MBM

text: no

text: Homo sapiens

text: UBERON:breast

text: no

text: no

text: no

text: no

text: not applicable

text: not collected

text: not collected

text: NICU

text: no

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: True, selective

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: asthma (childhood), eczema

text: no

text: metagenome

text: yes

text: no

text: daily

text: no

text: yes

text: no

text: RA

text: milk

text: human milk metagenome

text: male

text: rarely

text: monthly

text: not applicable

text: not applicable

text: not applicable

text: asthma

text: no

text: rarely

text: no

text: Timepoint 3

text: daily

text: not applicable

text: FALSE

text: not applicable

text: not collected

text: Mothers

text: not applicable

text: not applicable

text: weekly


text: University of California San Diego

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIMS.me

text: yes

text: yes

text: no

text: no

text: not collected

text: not collected

text: yes

text: yes

text: yes

text: hospital

text: never

text: caesarean

text: ucsd NICU, neonate, week 6, stool

text: Asthma

text: weekly

text: Animal distal gut

text: feces

text: asian

text: MBM and PE

text: weekly

text: no

text: USA: Southern CA

text: current

text: EFC 24 +MBM

text: no

text: Homo sapiens

characteristic: host

text: UBERON:feces

text: no

text: no

text: no

text: no

text: not applicable

text: not applicable

text: not collected

text: NICU

text: no

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: True, selective

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: asthma (childhood), eczema

text: no

text: metagenome

text: yes

text: no

text: daily

text: no

text: yes

text: no

text: RA

text: stool

text: human gut metagenome

text: male

text: rarely

text: monthly

text: not applicable

text: not applicable

text: not applicable

text: asthma

text: no

text: rarely

text: no

text: Timepoint 3

text: daily

text: not applicable

text: FALSE

text: not applicable

text: not applicable

text: Fecal

text: not applicable

text: not applicable

text: weekly


text: University of California San Diego

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

characteristic: NCBI submission package

text: yes

text: yes

text: no

text: no

text: not collected

text: yes

text: yes

text: yes

text: hospital

characteristic: broad-scale environmental context

text: rarely

text: allergyic rhinitis

text: caesarean

text: ucsd NICU, neonate, week 5, milk feed

text: Control

text: daily

text: Animal secretion

text: breast milk

text: hispanic, white

text: EFC

text: daily

text: no

text: USA: Southern CA

text: no

text: EFC 24 (with MBM when available)

text: no

text: Homo sapiens

text: UBERON:breast

text: no

text: no

text: no

text: no

text: not applicable

characteristic: ivh

text: not collected

text: NICU

text: no

text: FALSE

text: FALSE

text: FALSE

text: True, gestational

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: yes

text: metagenome

text: yes

text: no

text: daily

text: yes

text: yes

text: no

text: RA

text: not collected

text: not collected

text: milk

text: human milk metagenome

text: male

text: never

text: never

text: not applicable

text: no

text: never

text: no

text: Timepoint 3

text: daily

text: A

text: FALSE

text: EFC

text: Mothers

text: dog

text: not applicable

text: daily


text: University of California San Diego

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: yes

text: yes

text: no

text: no

text: not collected

text: yes

text: yes

text: yes

text: hospital

text: rarely

text: allergyic rhinitis

text: caesarean

text: ucsd NICU, neonate, week 5, stool

characteristic: description

text: Control

characteristic: diagnosis

text: daily

text: Animal distal gut

text: feces

text: hispanic, white

text: EFC

text: daily

text: no

text: USA: Southern CA

text: no

text: EFC 24 (with MBM when available)

text: no

text: Homo sapiens

text: UBERON:feces

text: no

text: no

text: no

text: no

text: not applicable

text: not applicable

text: not collected

characteristic: latitude and longitude

text: NICU

text: no

text: FALSE

text: FALSE

text: FALSE

text: True, gestational

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: FALSE

text: yes

text: metagenome

text: yes

text: no

text: daily

text: yes

text: yes

text: no

text: RA

text: not collected

text: not collected

text: stool

text: human gut metagenome

text: male

text: never

text: never

text: not applicable

text: no

text: never

text: no

text: Timepoint 3

text: daily

text: A

text: FALSE

text: not applicable

text: Fecal

text: dog

text: not applicable

text: daily


text: University of California San Diego

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: no

text: yes

text: no

text: yes

text: not collected

text: not collected

text: yes

text: yes

text: yes

text: hospital

text: weekly

text: vaginal

text: ucsd NICU, neonate, week 6, milk feed

text: Control

text: weekly

characteristic: egg

text: Animal secretion

text: breast milk

text: hispanic, white

characteristic: ethnicity

text: MBM and EFC

text: weekly

text: no

text: USA: Southern CA

text: no

text: EFC 22 + MBM

text: no

text: Homo sapiens

text: UBERON:breast

text: no

text: no

text: no

text: no

text: not applicable

text: not collected

text: NICU

characteristic: local-scale environmental context

text: no

text: FALSE

text: FALSE

text: True, premature cervical dilation

text: FALSE

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: yes

text: metagenome

text: yes

text: no

text: never

text: no

text: yes

text: yes

text: RA

text: milk

text: human milk metagenome

text: female

text: never

text: weekly

text: not applicable

text: no

text: rarely

text: no

text: Timepoint 3

text: never

text: not applicable

text: FALSE

text: not applicable

text: EFC

text: Formula

text: not applicable

text: not applicable

text: weekly


text: University of California San Diego

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: no

text: yes

text: no

text: yes

text: not collected

text: not collected

text: yes

text: yes

text: yes

text: hospital

text: weekly

text: vaginal

text: ucsd NICU, neonate, week 6, stool

text: Control

text: weekly

text: Animal distal gut

text: feces

text: hispanic, white

text: MBM and EFC

text: weekly

text: no

text: USA: Southern CA

characteristic: gravida

text: no

text: EFC 22 + MBM

text: no

text: Homo sapiens

text: UBERON:feces

text: no

text: no

text: no

text: no

text: not applicable

text: not applicable

text: not collected

text: NICU

text: no

text: FALSE

text: FALSE

text: True, premature cervical dilation

text: FALSE

text: TRUE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: yes

text: metagenome

text: yes

text: no

text: never

text: no

text: yes

text: yes

text: RA

text: stool

text: human gut metagenome

text: female

text: never

text: weekly

text: not applicable

text: no

text: rarely

text: no

text: Timepoint 3

text: never

text: not applicable

text: FALSE

text: not applicable

text: not applicable

text: Fecal

text: not applicable

text: not applicable

text: weekly


characteristic: External Id

text: University of California San Diego

characteristic: INSDC first public

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: Sterile water blank

text: sterile water

text: not applicable

text: not applicable

text: not applicable

characteristic: fish

text: not applicable

text: not applicable

text: USA: Southern CA

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: metagenome

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: control blank

text: metagenome

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: FALSE

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable


text: University of California San Diego

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIMS.me

text: yes

text: no

text: no

text: no

text: not collected

text: not collected

text: yes

text: yes

text: yes

text: hospital

text: weekly

text: allergic rhinitis

text: caesarean

text: ucsd NICU, neonate, week 4, stool

text: Asthma

text: weekly

text: Animal distal gut

text: feces

text: mixed (hispanic and white)

text: MBM and PE

text: weekly

text: no

text: USA: Southern CA

characteristic: geographic location

text: no

text: MBM + PE30

text: no

text: Homo sapiens

text: UBERON:feces

text: no

text: no

text: no

text: no

text: not applicable

text: not applicable

text: not collected

text: NICU

text: no

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: TRUE

text: asthma, allergic rhinitis

text: no

text: metagenome

text: no

text: no

text: never

text: no

text: yes

text: no

text: RA

text: not collected

text: not collected

text: stool

text: human gut metagenome

text: female

text: weekly

text: weekly

text: not applicable

text: not applicable

text: not applicable

text: asthma

text: no

text: weekly

text: no

text: not recorded

text: never

text: not applicable

text: FALSE

text: not applicable

text: not applicable

text: not collected

text: not applicable

text: not applicable

text: weekly


text: University of California San Diego

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

characteristic: NCBI submission package

text: no

text: yes

text: no

text: yes

text: not collected

text: yes

text: no

text: no

text: hospital

characteristic: broad-scale environmental context

text: weekly

text: vaginal

text: ucsd NICU, neonate, week 2, milk feed

text: Control

text: not collected

text: not collected

text: not collected

text: not collected

text: daily

text: Animal secretion

text: breast milk

text: white

text: MBM and DBM

text: monthly

text: not collected

text: not collected

text: USA: Southern CA

text: no

text: not collected

text: not collected

text: Homo sapiens

characteristic: host

text: UBERON:breast

text: yes

text: yes

text: yes

text: no

text: not collected

text: NICU

text: no

text: FALSE

text: FALSE

text: True, cervical insufficiency

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: yes

text: metagenome

text: no

text: yes

text: weekly

text: yes

text: yes

text: yes

text: intubation

text: not collected

text: not collected

text: milk

text: human milk metagenome

text: female

text: never

text: never

text: not applicable

text: not applicable

text: no

text: rarely

text: not collected

text: not recorded

text: weekly

text: not applicable

text: FALSE

text: not applicable

text: MBM

text: not collected

text: dog

text: hydrocortisone

text: daily


text: University of California San Diego

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: no

text: yes

text: no

text: yes

text: not collected

text: yes

text: no

text: no

text: hospital

text: weekly

text: vaginal

text: ucsd NICU, neonate, week 2, stool

characteristic: description

text: Control

characteristic: diagnosis

text: not collected

text: not collected

text: not collected

text: not collected

text: daily

text: Animal distal gut

text: feces

text: white

text: MBM and DBM

text: monthly

text: not collected

text: not collected

text: USA: Southern CA

text: no

text: not collected

text: not collected

text: Homo sapiens

text: UBERON:feces

text: yes

text: yes

text: yes

text: no

characteristic: ivh

text: not applicable

text: not collected

text: NICU

text: no

text: FALSE

text: FALSE

text: True, cervical insufficiency

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: FALSE

text: yes

text: metagenome

text: no

text: yes

text: weekly

text: yes

text: yes

text: yes

text: intubation

text: not collected

text: not collected

text: stool

text: human gut metagenome

text: female

text: never

text: never

text: not applicable

text: not applicable

text: no

text: rarely

text: not collected

text: not recorded

text: weekly

text: not applicable

text: FALSE

text: not applicable

text: not applicable

text: not collected

text: dog

text: hydrocortisone

text: daily


Caulokaempferia coenobialis

text: South China Normal University

characteristic: INSDC secondary accession

text: live

text: Plant

characteristic: SRA accession

text: not collected

characteristic: age

text: China

text: not collected

characteristic: isolate

text: Monolophus coenobialis

characteristic: organism

text: anther

characteristic: tissue

text: Plant sample from Monolophus coenobialis

characteristic: title


Hornstedtia hainanensis

characteristic: External Id

text: South China Normal University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Plant

text: not collected

text: China

text: not collected

text: Hornstedtia hainanensis

text: anther

text: Plant sample from Hornstedtia hainanensis


Zingiber nudicarpum

text: South China Normal University

text: live

characteristic: INSDC status

text: Plant

characteristic: NCBI submission model

characteristic: NCBI submission package

text: not collected

text: China

text: not collected

text: Zingiber nudicarpum

text: anther

text: Plant sample from Zingiber nudicarpum


Pyrgophyllum yunnanense

text: South China Normal University

text: live

text: Plant

text: not collected

text: China

text: not collected

text: Pyrgophyllum yunnanense

text: anther

text: Plant sample from Pyrgophyllum yunnanense


text: Huazhong Agricultural University

text: live

text: Plant

text: lettuce

characteristic: cultivar

characteristic: ecotype

text: China:wuhan

text: Lactuca sativa

text: leaf


text: Huazhong Agricultural University

text: live

text: Plant

text: lettuce

text: China:wuhan

text: Lactuca sativa

text: leaf


text: Shuguang Hospital Affiliated to Shanghai University of Traditional Chinese Medicine

text: live

text: Model organism or animal

text: Nine weeks old

text: Mus musculus

text: biological replicate1

characteristic: replicate

text: male

characteristic: sex

characteristic: strain

text: kidney

text: Model organism or animal sample from Mus musculus


characteristic: INSDC secondary accession

text: live

text: Model organism or animal

characteristic: SRA accession

text: Nine weeks old

text: Mus musculus

text: biological replicate2

text: male

text: kidney


text: live

text: Model organism or animal

text: Nine weeks old

text: Mus musculus

characteristic: organism

text: biological replicate3

text: male

text: kidney


text: live

text: Model organism or animal

text: Nine weeks old

text: Mus musculus

text: biological replicate4

text: male

text: kidney

characteristic: tissue


text: live

text: Model organism or animal

text: Nine weeks old

text: Mus musculus

text: biological replicate5

text: male

text: kidney

characteristic: title


characteristic: External Id

text: live

text: Model organism or animal

text: Nine weeks old

text: Mus musculus

text: biological replicate6

text: male

text: kidney


text: Model Animal Research Center of Nanjing University, Nanjing University

characteristic: INSDC center name

text: live

text: Generic

text: 6 weeks of age

characteristic: age

text: LONP1ATF4 DmKO mouse

characteristic: genotype

text: Mus musculus

text: Gastrocnemius muscle from 6-week-old LONP1ATF4 DmKO mouse

text: Gastrocnemius muscle

text: LONP1ATF4 DmKO biological rep2


characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: 6 weeks of age

text: LONP1ATF4 DmKO mouse

text: Mus musculus

text: Gastrocnemius muscle

text: LONP1ATF4 DmKO biological rep1


text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 6 weeks of age

text: LONP1 mKO mouse

text: Mus musculus

text: Gastrocnemius muscle from 6-week-old LONP1 mKO mouse

text: Gastrocnemius muscle

text: LONP1 mKO biological rep2


text: live

text: Generic

text: 6 weeks of age

text: LONP1 mKO mouse

text: Mus musculus

text: Gastrocnemius muscle

text: LONP1 mKO biological rep1


text: live

text: Generic

text: 6 weeks of age

text: wild-type mouse-control mouse for LONP1 mKO

text: Mus musculus

text: Gastrocnemius muscle from 6-week-old wild-type mouse

text: Gastrocnemius muscle

text: wild-type biological rep2


text: live

text: Generic

text: 6 weeks of age

text: Mus musculus

text: Gastrocnemius muscle

text: wild-type biological rep1


text: live

text: Generic

text: 2 weeks of age

text: skeletal muscle specific overexpression a deletion mutant form of ornithine transcarbamylase

characteristic: genotype/variation

text: Mus musculus

text: Gastrocnemius muscle from 2-week-old MCK-ΔOTC mouse

characteristic: strain background

text: Gastrocnemius muscle

text: MCK-ΔOTC biological rep2


text: live

text: Generic

text: 2 weeks of age

text: Mus musculus

text: Gastrocnemius muscle

text: MCK-ΔOTC biological rep1


text: live

text: Generic

text: 2 weeks of age

text: non-transgenic (NTG)

text: Mus musculus

text: Gastrocnemius muscle from 2-week-old NTG mouse

text: Gastrocnemius muscle

text: NTG biological rep2


text: live

text: Generic

text: 2 weeks of age

text: non-transgenic (NTG)

text: Mus musculus

text: Gastrocnemius muscle

text: NTG biological rep1


text: Nanjing Forestry University

text: live

text: Invertebrate

text: Yuchao Yuan

text: China:huangshan

text: pine

characteristic: host

characteristic: isolate

text: 29.72 N 118.33 E

text: Bursaphelenchus xylophilus

text: whole organism


text: Nanjing Forestry University

characteristic: INSDC secondary accession

text: live

text: Invertebrate

characteristic: SRA accession

text: Yuchao Yuan

text: China:huangshan

text: pine

text: 29.72 N 118.34 E

text: Bursaphelenchus xylophilus

text: whole organism


text: Nanjing Forestry University

text: live

text: Invertebrate

text: Yuchao Yuan

text: China:huangshan

text: pine

text: 29.72 N 118.35 E

text: Bursaphelenchus xylophilus

characteristic: organism

text: whole organism

characteristic: tissue


characteristic: External Id

text: Nanjing Forestry University

text: live

text: Invertebrate

text: Yuchao Yuan

text: China:huangshan

text: pine

text: 29.72 N 118.36 E

text: Bursaphelenchus xylophilus

text: whole organism

characteristic: title


text: Nanjing Forestry University

characteristic: INSDC center name

text: live

text: Invertebrate

text: Yuchao Yuan

text: China:huangshan

text: pine

text: 29.72 N 118.37 E

text: Bursaphelenchus xylophilus

text: whole organism


text: Nanjing Forestry University

text: live

text: Invertebrate

text: Yuchao Yuan

text: China:huangshan

text: pine

text: 29.72 N 118.38 E

text: Bursaphelenchus xylophilus

text: whole organism


text: Nanjing Forestry University

text: live

text: Invertebrate

text: Yuchao Yuan

text: China:huangshan

text: pine

text: 29.72 N 118.39 E

text: Bursaphelenchus xylophilus

text: whole organism


text: Nanjing Forestry University

text: live

text: Invertebrate

text: Yuchao Yuan

text: China:huangshan

text: pine

text: 29.72 N 118.40 E

text: Bursaphelenchus xylophilus

text: whole organism


text: Nanjing Forestry University

text: live

text: Invertebrate

text: Yuchao Yuan

text: China:huangshan

text: pine

text: 29.72 N 118.41 E

text: Bursaphelenchus xylophilus

text: whole organism


text: Nanjing Forestry University

text: live

text: Invertebrate

text: Yuchao Yuan

text: China:huangshan

text: pine

text: 29.72 N 118.42 E

text: Bursaphelenchus xylophilus

text: whole organism


text: University of Copenhagen

text: live

text: Generic

characteristic: cell line

text: beta cells differentiatied in vitro from hiPSCs

characteristic: cell type

text: HNF1A wt/R272C

characteristic: genotype

text: Homo sapiens

text: NKX6.1+/Cpep+ FACS sorted

characteristic: purification

text: beta cells

text: hiPSC-derived beta cells - HNF1A wt/R272C_rep4


text: University of Copenhagen

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: HNF1A wt/R272C

text: Homo sapiens

text: NKX6.1+/Cpep+ FACS sorted

text: beta cells

text: hiPSC-derived beta cells - HNF1A wt/R272C_rep3


text: University of Copenhagen

text: live

text: Generic

characteristic: NCBI submission package

text: HNF1A wt/R272C

text: Homo sapiens

text: NKX6.1+/Cpep+ FACS sorted

text: beta cells

text: hiPSC-derived beta cells - HNF1A wt/R272C_rep2


text: University of Copenhagen

text: live

text: Generic

text: HNF1A wt/R272C

text: Homo sapiens

text: NKX6.1+/Cpep+ FACS sorted

text: beta cells

text: hiPSC-derived beta cells - HNF1A wt/R272C_rep1


text: University of Copenhagen

text: live

text: Generic

text: HNF1A wt/wt

text: Homo sapiens

text: NKX6.1+/Cpep+ FACS sorted

text: beta cells

text: hiPSC-derived beta cells - HNF1A wt/wt_rep4


text: University of Copenhagen

text: live

text: Generic

text: HNF1A wt/wt

text: Homo sapiens

text: NKX6.1+/Cpep+ FACS sorted

text: beta cells

text: hiPSC-derived beta cells - HNF1A wt/wt_rep3


text: University of Copenhagen

text: live

text: Generic

text: HNF1A wt/wt

text: Homo sapiens

text: NKX6.1+/Cpep+ FACS sorted

text: beta cells

text: hiPSC-derived beta cells - HNF1A wt/wt_rep2


text: University of Copenhagen

text: live

text: Generic

text: HNF1A wt/wt

text: Homo sapiens

text: NKX6.1+/Cpep+ FACS sorted

text: beta cells

text: hiPSC-derived beta cells - HNF1A wt/wt_rep1


text: Molecular Genetics, The Weizmann Institute

text: live

text: Generic

text: hESC H9 (Wa-09)

text: Homo sapiens

characteristic: phenotype

text: Embryonic stem cells

text: hESCs shDAP5_total_rep4

text: RNA

characteristic: treatment


characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: hESC H9 (Wa-09)

text: Homo sapiens

text: Embryonic stem cells

text: hESCs shDAP5_total_rep3

text: RNA


text: live

text: Generic

text: hESC H9 (Wa-09)

text: Homo sapiens

characteristic: organism

text: Embryonic stem cells

text: hESCs shDAP5_total_rep2

text: RNA


characteristic: External Id

text: live

text: Generic

text: hESC H9 (Wa-09)

text: Homo sapiens

text: Embryonic stem cells

text: hESCs shDAP5_total_rep1

text: RNA


text: live

text: Generic

text: hESC H9 (Wa-09)

text: Homo sapiens

text: shNT

text: Embryonic stem cells

text: hESCs shNT_total_rep4

characteristic: title

text: RNA


characteristic: INSDC center name

text: live

text: Generic

text: hESC H9 (Wa-09)

text: Homo sapiens

text: shNT

text: Embryonic stem cells

text: hESCs shNT_total_rep3

text: RNA


text: live

text: Generic

text: hESC H9 (Wa-09)

text: Homo sapiens

text: shNT

text: Embryonic stem cells

text: hESCs shNT_total_rep2

text: RNA


text: live

text: Generic

text: hESC H9 (Wa-09)

text: Homo sapiens

text: shNT

text: Embryonic stem cells

text: hESCs shNT_total_rep1

text: RNA


text: live

text: Generic

text: hESC H9 (Wa-09)

text: Homo sapiens

text: Embryonic stem cells

text: hESCs shDAP5_RP_rep4

text: RNA


text: live

text: Generic

text: hESC H9 (Wa-09)

text: Homo sapiens

text: Embryonic stem cells

text: hESCs shDAP5_RP_rep3

text: RNA


text: live

text: Generic

text: hESC H9 (Wa-09)

text: Homo sapiens

text: Embryonic stem cells

text: hESCs shDAP5_RP_rep2

text: RNA


text: live

text: Generic

text: hESC H9 (Wa-09)

text: Homo sapiens

text: Embryonic stem cells

text: hESCs shDAP5_RP_rep1

text: RNA


text: live

text: Generic

text: hESC H9 (Wa-09)

text: Homo sapiens

text: shNT

text: Embryonic stem cells

text: hESCs shNT_RP_rep4

text: RNA


text: live

text: Generic

text: hESC H9 (Wa-09)

text: Homo sapiens

text: shNT

text: Embryonic stem cells

text: hESCs shNT_RP_rep3

text: RNA


text: live

text: Generic

text: hESC H9 (Wa-09)

text: Homo sapiens

text: shNT

text: Embryonic stem cells

text: hESCs shNT_RP_rep2

text: RNA


text: live

text: Generic

text: hESC H9 (Wa-09)

text: Homo sapiens

text: shNT

text: Embryonic stem cells

text: hESCs shNT_RP_rep1

text: RNA


text: live

text: Generic

text: hESC H9 (Wa-09)

text: Anti-EIF4G2 (Cell Signaling, C-5169S)

characteristic: clip antibody

text: Homo sapiens

text: Embryonic stem cells

text: UV crosslinking


text: live

text: Generic

text: hESC H9 (Wa-09)

characteristic: cell type

text: Anti-EIF4G2 (MBL, RN003P)

text: Homo sapiens

text: Embryonic stem cells

text: UV crosslinking


text: live

text: Generic

text: hESC H9 (Wa-09)

text: Homo sapiens

text: Embryonic stem cells

text: UV crosslinking


R1, day 18

text: University of Antwerp

text: live

text: MIMARKS.survey

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMARKS:5.0

characteristic: description

text: Reactor R1

text: Synthetic wastewater

text: Belgium:Antwerp

text: 51.1781 N 4.4156 E

text: bioreactor metagenome

text: mechanical stirring

characteristic: perturbation

text: MIMARKS Survey related sample from bioreactor metagenome


R1, day 30

text: University of Antwerp

characteristic: INSDC first public

text: live

text: MIMARKS.survey

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: Reactor R1

text: Synthetic wastewater

text: Belgium:Antwerp

text: 51.1781 N 4.4156 E

text: bioreactor metagenome

text: mechanical stirring


R1, day 47

text: University of Antwerp

characteristic: INSDC last update

text: live

text: MIMARKS.survey

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: Reactor R1

text: Synthetic wastewater

text: Belgium:Antwerp

text: 51.1781 N 4.4156 E

text: bioreactor metagenome

text: mechanical stirring


R1, day 87

text: University of Antwerp

text: live

characteristic: INSDC status

text: MIMARKS.survey

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: Reactor R1

text: Synthetic wastewater

text: Belgium:Antwerp

text: 51.1781 N 4.4156 E

text: bioreactor metagenome

text: mechanical stirring


R1, day 143

text: University of Antwerp

text: live

text: MIMARKS.survey

characteristic: NCBI submission model

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: Reactor R1

text: Synthetic wastewater

text: Belgium:Antwerp

text: 51.1781 N 4.4156 E

text: bioreactor metagenome

text: mechanical stirring


R1, day 222

text: University of Antwerp

text: live

text: MIMARKS.survey

text: MIGS/MIMS/MIMARKS.wastewater

characteristic: NCBI submission package

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: Reactor R1

text: Synthetic wastewater

text: Belgium:Antwerp

text: 51.1781 N 4.4156 E

text: bioreactor metagenome

text: mechanical stirring


R1, day 264

text: University of Antwerp

text: live

text: MIMARKS.survey

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: Reactor R1

text: Synthetic wastewater

text: Belgium:Antwerp

text: 51.1781 N 4.4156 E

text: bioreactor metagenome

text: mechanical stirring


R1, day 310

text: University of Antwerp

text: live

text: MIMARKS.survey

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: Reactor R1

text: Synthetic wastewater

text: Belgium:Antwerp

text: 51.1781 N 4.4156 E

text: bioreactor metagenome

text: mechanical stirring


R1, day 387

text: University of Antwerp

text: live

text: MIMARKS.survey

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: Reactor R1

text: Synthetic wastewater

text: Belgium:Antwerp

text: 51.1781 N 4.4156 E

text: bioreactor metagenome


R1, day 412

text: University of Antwerp

text: live

text: MIMARKS.survey

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: Reactor R1

text: Synthetic wastewater

text: Belgium:Antwerp

text: 51.1781 N 4.4156 E

text: bioreactor metagenome


R1, day 430

text: University of Antwerp

text: live

text: MIMARKS.survey

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: Reactor R1

text: Synthetic wastewater

text: Belgium:Antwerp

text: 51.1781 N 4.4156 E

text: bioreactor metagenome


R1, day 460

text: University of Antwerp

text: live

text: MIMARKS.survey

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: Reactor R1

text: Synthetic wastewater

text: Belgium:Antwerp

text: 51.1781 N 4.4156 E

text: bioreactor metagenome


R2, day 18

text: University of Antwerp

text: live

text: MIMARKS.survey

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: Reactor R2

text: Synthetic wastewater

text: Belgium:Antwerp

text: 51.1781 N 4.4156 E

text: bioreactor metagenome


R2, day 53

text: University of Antwerp

text: live

text: MIMARKS.survey

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: Reactor R2

text: Synthetic wastewater

text: Belgium:Antwerp

text: 51.1781 N 4.4156 E

text: bioreactor metagenome


R2, day 87

text: University of Antwerp

text: live

text: MIMARKS.survey

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: Reactor R2

text: Synthetic wastewater

text: Belgium:Antwerp

text: 51.1781 N 4.4156 E

text: bioreactor metagenome


R2, day 130

text: University of Antwerp

text: live

text: MIMARKS.survey

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: Reactor R2

text: Synthetic wastewater

text: Belgium:Antwerp

text: 51.1781 N 4.4156 E

text: bioreactor metagenome


R2, day 158

text: University of Antwerp

text: live

text: MIMARKS.survey

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: Reactor R2

text: Synthetic wastewater

text: Belgium:Antwerp

text: 51.1781 N 4.4156 E

text: bioreactor metagenome


R2, day 222

text: University of Antwerp

text: live

text: MIMARKS.survey

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: Reactor R2

text: Synthetic wastewater

text: Belgium:Antwerp

text: 51.1781 N 4.4156 E

text: bioreactor metagenome


R2, day 264

text: University of Antwerp

text: live

text: MIMARKS.survey

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: Reactor R2

text: Synthetic wastewater

text: Belgium:Antwerp

text: 51.1781 N 4.4156 E

text: bioreactor metagenome


R2, day 310

text: University of Antwerp

text: live

text: MIMARKS.survey

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: Reactor R2

text: Synthetic wastewater

text: Belgium:Antwerp

text: 51.1781 N 4.4156 E

text: bioreactor metagenome


R2, day 387

text: University of Antwerp

text: live

text: MIMARKS.survey

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: Reactor R2

text: Synthetic wastewater

text: Belgium:Antwerp

text: 51.1781 N 4.4156 E

text: bioreactor metagenome


R2, day 412

text: University of Antwerp

text: live

text: MIMARKS.survey

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: Reactor R2

text: Synthetic wastewater

text: Belgium:Antwerp

text: 51.1781 N 4.4156 E

text: bioreactor metagenome


R2, day 430

text: University of Antwerp

text: live

text: MIMARKS.survey

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: Reactor R2

text: Synthetic wastewater

text: Belgium:Antwerp

text: 51.1781 N 4.4156 E

text: bioreactor metagenome


R2, day 460

text: University of Antwerp

text: live

text: MIMARKS.survey

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: Reactor R2

text: Synthetic wastewater

text: Belgium:Antwerp

text: 51.1781 N 4.4156 E

text: bioreactor metagenome


name: Infectious Bronchitis virus serotype M41-CK

text: The Pirbright Institute

text: live

text: Pathogen.cl

text: Sarah Keep

text: cultured virus swarm

characteristic: genotype

text: United Kingdom

text: Gallus gallus

characteristic: host

text: CK cells

text: Infectious Bronchitis

text: Massachusetts

characteristic: isolate

text: Cultured in-ovo

text: 51.2798 N 0.6350 W

text: Infectious bronchitis virus

text: passaged 100 times in CK cells

characteristic: serotype

characteristic: strain


Pseudomonas Kunmingensis7850S

characteristic: External Id

text: Institute of Deepp-sea Science and Engineering

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

characteristic: collection date

text: not collected

text: segiment

text: not collected

characteristic: isolation source

text: Stutzerimonas kunmingensis

characteristic: organism

text: cell culture

characteristic: sample type

text: Microbe sample from Stutzerimonas kunmingensis

characteristic: tmp


Pseudomonas Kunmingensis7850S_pacbio

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: not collected

text: segiment

text: not collected

text: Stutzerimonas kunmingensis

text: cell culture

characteristic: title


text: Peking University

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: cell line

text: CTCF-mAID-mClover

characteristic: genotype

text: Homo sapiens

text: cultured cell

text: EdUHU-K562-CTCF-mAC-5C9-RPKM-rmblacklist-1k.bedgraph


characteristic: External Id

text: Peking University

text: live

text: Generic

text: WT

text: Homo sapiens

text: cultured cell

text: EdUHU-K562-WT+IAA-RPKM-rmblacklist-1k.bw


text: Sunghyouk Park's lab, Natural Products, Seoul National University

characteristic: INSDC secondary accession

text: live

text: Generic

text: Clear cell renal cell carcinoma (ccRCC) cell

characteristic: cell type

text: GPX8 knockout

text: Homo sapiens

text: GPX8-KO-Caki1, rep3


text: live

text: Generic

characteristic: SRA accession

text: GPX8 knockout

text: Homo sapiens

text: GPX8-KO-Caki1, rep2


text: live

text: Generic

text: GPX8 knockout

text: Homo sapiens

text: GPX8-KO-Caki1, rep1


text: live

text: Generic

text: Wild type

text: Homo sapiens

text: WT-Caki1, rep3


text: live

text: Generic

text: Wild type

text: Homo sapiens

text: WT-Caki1, rep2


text: live

text: Generic

text: Wild type

text: Homo sapiens

text: WT-Caki1, rep1


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: female

characteristic: Sex

characteristic: Submitter Id

text: 2-5 months

characteristic: age

text: NCBI

characteristic: broker name

text: house mouse

characteristic: common name

text: BMMNCs

characteristic: markers

text: Mus musculus

text: Bone Marrow

text: mixed samples (five C.B10 BM failure control mice and five bone marrow failure mice treated with G-MDSCs)

characteristic: subject

text: Bone Marrow

characteristic: tissue

text: Bone Marrow Mononuclear Cells, VDJ