JEX/A-267 Inoculated

text: PCN resistant (Globodera rostochiensis)

text: live

text: Plant

characteristic: SRA accession

text: 40 days

text: 15th July 2019

text: JEX/A-267 control roots after inoculation

text: Colombia

text: RNA

text: Solanum tuberosum

characteristic: organism

text: Inoculated

text: roots

text: Plant sample from Solanum tuberosum

characteristic: title


status: PUBLIC

characteristic: External Id

text: Huazhong Agricultural University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Plant

characteristic: NCBI submission model

characteristic: NCBI submission package

text: mature stage

tag: attribute

text: not collected

characteristic: isolate

text: Pueraria montana

text: replicate = biological replicate 1

characteristic: replicate

text: leaf

characteristic: tissue

text: Plant sample from Pueraria montana


text: ICAR-National Research Center on Camel

text: live

text: Metagenome or environmental

text: India

text: Camel

characteristic: host

text: Rumen Liquor

text: 27.98 N 73.36 E

text: gut metagenome

text: anaerobe

text: DEPC treated bottle

text: 50 ML

text: DNA extraction kit

text: Camel Rumen metagenome


text: ICAR-National Research Center on Camel

text: live

text: Metagenome or environmental

text: India

text: Camel

text: Rumen Liquor

text: 27.98 N 73.36 E

text: gut metagenome

text: anaerobe

text: DEPC treated bottle

text: 50 mL

text: DNA extraction kit

text: Camel Rumen Metagenome 2


text: ICAR-National Research Center on Camel

text: live

text: Metagenome or environmental

text: India

text: Camel

text: Rumen Liquor

text: 27.98 N 73.36 E

text: gut metagenome

text: anaerobe

text: DEPC treated bottle

text: 50 mL

text: DNA extraction kit

text: Camel Rumen Metagenome 3


sample 35

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

characteristic: description

text: Fibroblast derived iPSCs

text: Homo sapiens

text: PCR product

text: Fibroblast

text: PARN mutant patient iPSCs-1

text: DMSO

characteristic: treatment


sample 36

text: Boston Childrens Hospital

text: live

text: Human

characteristic: SRA accession

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: Fibroblast derived iPSCs

text: Homo sapiens

text: PCR product

text: Fibroblast

text: PARN mutant patient iPSCs-1

text: PAPD5 inhibitor (RG7834)


sample 37

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: Fibroblast derived iPSCs

text: Homo sapiens

characteristic: organism

text: PCR product

text: Fibroblast

text: PARN mutant patient iPSCs-1

text: CRISPR-Cas9 mediated PAPD5 knockout


sample 38

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: Fibroblast derived iPSCs

text: Homo sapiens

text: PCR product

text: Fibroblast

text: PARN mutant patient iPSCs-2

characteristic: title

text: DMSO


sample 39

characteristic: External Id

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: Fibroblast derived iPSCs

text: Homo sapiens

text: PCR product

text: Fibroblast

text: PARN mutant patient iPSCs-2

text: PAPD5 inhibitor (RG7834)


sample 40

text: Boston Childrens Hospital

characteristic: INSDC center name

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: Fibroblast derived iPSCs

text: Homo sapiens

text: PCR product

text: Fibroblast

text: PARN mutant patient iPSCs-2

text: CRISPR-Cas9 mediated PAPD5 knockout


sample 41

text: Boston Childrens Hospital

characteristic: INSDC first public

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: Fibroblast derived iPSCs

text: Homo sapiens

text: PCR product

text: Fibroblast

text: PARN mutant patient iPSCs-3

text: DMSO


sample 42

text: Boston Childrens Hospital

characteristic: INSDC last update

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: Fibroblast derived iPSCs

text: Homo sapiens

text: PCR product

text: Fibroblast

text: PARN mutant patient iPSCs-3

text: PAPD5 inhibitor (RG7834)


sample 43

text: Boston Childrens Hospital

characteristic: INSDC secondary accession

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: Fibroblast derived iPSCs

text: Homo sapiens

text: PCR product

text: Fibroblast

text: PARN mutant patient iPSCs-3

text: CRISPR-Cas9 mediated PAPD5 knockout


sample 44

text: Boston Childrens Hospital

text: live

characteristic: INSDC status

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: Fibroblast derived iPSCs

text: Homo sapiens

text: PCR product

text: Fibroblast

text: DKC1 mutant patient iPSCs-1

text: Control


sample 45

text: Boston Childrens Hospital

text: live

text: Human

characteristic: NCBI submission model

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: Fibroblast derived iPSCs

text: Homo sapiens

text: PCR product

text: Fibroblast

text: DKC1 mutant patient iPSCs-1

text: CRISPR-Cas9 mediated PAPD5 knockout


sample 46

text: Boston Childrens Hospital

text: live

text: Human

characteristic: NCBI submission package

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: Fibroblast derived iPSCs

text: Homo sapiens

text: PCR product

text: Fibroblast

text: DKC1 mutant patient iPSCs-2

text: Control


sample 47

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: Fibroblast derived iPSCs

characteristic: isolate

text: Homo sapiens

text: PCR product

text: Fibroblast

text: DKC1 mutant patient iPSCs-2

text: CRISPR-Cas9 mediated PAPD5 knockout


sample 48

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: Fibroblast derived iPSCs

text: Homo sapiens

text: PCR product

text: Fibroblast

text: DKC1 mutant patient iPSCs-3

text: Control


sample 49

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: Fibroblast derived iPSCs

text: Homo sapiens

text: PCR product

text: Fibroblast

text: DKC1 mutant patient iPSCs-3

text: CRISPR-Cas9 mediated PAPD5 knockout


sample 50

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: TERC

text: Fibroblast derived iPSCs

text: Homo sapiens

text: PCR product

text: Fibroblast

text: WT iPSCs-No indel Ctrl

text: Control


sample 51

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: TERC

text: Fibroblast derived iPSCs

text: Homo sapiens

text: PCR product

text: Fibroblast

text: WT iPSCs-DKC1-NTE-Mutant-1

text: CRISPR-Cas9 mediated disruption of N-terminal of DKC1


sample 52

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: TERC

text: Fibroblast derived iPSCs

text: Homo sapiens

text: PCR product

text: Fibroblast

text: WT iPSCs-DKC1-NTE-Mutant-2


sample 53

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: Fibroblast derived iPSCs

text: Homo sapiens

text: scNFF-Clone-mr1-DMSO_S1_L001_R1_001.fastq.gz

text: scNFF-Clone-mr1-DMSO_S1_L001_R2_001.fastq.gz

text: PCR product

text: Fibroblast

text: WT iPSCs-No indel Ctrl

text: DMSO


sample 54

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: Fibroblast derived iPSCs

text: Homo sapiens

text: scNFF-Clone-mr17-DMSO_S3_L001_R1_001.fastq.gz

text: scNFF-Clone-mr17-DMSO_S3_L001_R2_001.fastq.gz

text: PCR product

text: Fibroblast

text: WT iPSCs-DKC1-NTE-Mutant-1

text: DMSO


sample 55

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: Fibroblast derived iPSCs

text: Homo sapiens

text: scNFF-Clone-mr17-RG_S4_L001_R1_001.fastq.gz

text: scNFF-Clone-mr17-RG_S4_L001_R2_001.fastq.gz

text: PCR product

text: Fibroblast

text: WT iPSCs-DKC1-NTE-Mutant-1

text: PAPD5 inhibitor (RG7834)


sample 56

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: Fibroblast derived iPSCs

text: Homo sapiens

text: scNFF-Clone-mr21-DMSO_S5_L001_R1_001.fastq.gz

text: scNFF-Clone-mr21-DMSO_S5_L001_R2_001.fastq.gz

text: PCR product

text: Fibroblast

text: WT iPSCs-DKC1-NTE-Mutant-2

text: DMSO


sample 57

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: Fibroblast derived iPSCs

text: Homo sapiens

text: scNFF-Clone-mr21-RG_S6_L001_R1_001.fastq.gz

text: scNFF-Clone-mr21-RG_S6_L001_R2_001.fastq.gz

text: PCR product

text: Fibroblast

text: WT iPSCs-DKC1-NTE-Mutant-2

text: PAPD5 inhibitor (RG7834)


sample 58

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: Fibroblast derived iPSCs

text: Homo sapiens

text: scNFF-Clone-mr7-DMSO_S7_L001_R1_001.fastq.gz

text: scNFF-Clone-mr7-DMSO_S7_L001_R2_001.fastq.gz

text: PCR product

text: Fibroblast

text: WT iPSCs-DKC1-NTE-Mutant-3

text: DMSO


sample 59

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: Fibroblast derived iPSCs

text: Homo sapiens

text: scNFF-Clone-mr7-RG_S8_L001_R1_001.fastq.gz

text: scNFF-Clone-mr7-RG_S8_L001_R2_001.fastq.gz

text: PCR product

text: Fibroblast

text: WT iPSCs-DKC1-NTE-Mutant-3

text: PAPD5 inhibitor (RG7834)


sample 60

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: Fibroblast derived iPSCs

text: Homo sapiens

text: scNFF-Clone-mr13-DMSO_S9_L001_R1_001.fastq.gz

text: scNFF-Clone-mr13-DMSO_S9_L001_R2_001.fastq.gz

text: PCR product

text: Fibroblast

text: WT iPSCs-DKC1-NTE-Mutant-4

text: DMSO


sample 61

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: Fibroblast derived iPSCs

text: Homo sapiens

text: scNFF-Clone-mr13-RG_S10_L001_R1_001.fastq.gz

text: scNFF-Clone-mr13-RG_S10_L001_R2_001.fastq.gz

text: PCR product

text: Fibroblast

text: WT iPSCs-DKC1-NTE-Mutant-4

text: PAPD5 inhibitor (RG7834)


sample 62

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: Fibroblast derived iPSCs

text: Homo sapiens

text: scNFF-Clone-mr2-DMSO_S11_L001_R1_001.fastq.gz

text: scNFF-Clone-mr2-DMSO_S11_L001_R2_001.fastq.gz

text: PCR product

text: Fibroblast

text: WT iPSCs-DKC1-NTE-Mutant-5

text: DMSO


sample 63

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: Fibroblast derived iPSCs

text: Homo sapiens

text: scNFF-Clone-mr2-RG_S12_L001_R1_001.fastq.gz

text: scNFF-Clone-mr2-RG_S12_L001_R2_001.fastq.gz

text: PCR product

text: Fibroblast

text: WT iPSCs-DKC1-NTE-Mutant-5

text: PAPD5 inhibitor (RG7834)


sample 64

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: Fibroblast derived iPSCs

text: Homo sapiens

text: scNFF-Clone-mr3-DMSO_S13_L001_R1_001.fastq.gz

text: scNFF-Clone-mr3-DMSO_S13_L001_R2_001.fastq.gz

text: PCR product

text: Fibroblast

text: WT iPSCs-DKC1-NTE-Mutant-6

text: DMSO


sample 65

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: Fibroblast derived iPSCs

text: Homo sapiens

text: scNFF-Clone-mr3-RG_S14_L001_R1_001.fastq.gz

text: scNFF-Clone-mr3-RG_S14_L001_R2_001.fastq.gz

text: PCR product

text: Fibroblast

text: WT iPSCs-DKC1-NTE-Mutant-6

text: PAPD5 inhibitor (RG7834)


sample 66

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: Fibroblast derived iPSCs

text: Homo sapiens

text: PCR product

text: Fibroblast

text: DKC1 mutant patient iPSCs-1

text: DMSO


sample 67

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: Fibroblast derived iPSCs

text: Homo sapiens

text: PCR product

text: Fibroblast

text: DKC1 mutant patient iPSCs-1

text: PAPD5 inhibitor (RG7834)


sample 68

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: Fibroblast derived iPSCs

text: Homo sapiens

text: PCR product

text: Fibroblast

text: DKC1 mutant patient iPSCs-2

text: DMSO


sample 69

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: Fibroblast derived iPSCs

text: Homo sapiens

text: PCR product

text: Fibroblast

text: DKC1 mutant patient iPSCs-3

text: DMSO


sample 70

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: TERC

text: Fibroblast derived iPSCs

text: Homo sapiens

text: PCR product

text: Fibroblast

text: DKC1 mutant patient iPSCs-1

text: DMSO


sample 71

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: TERC

text: Fibroblast derived iPSCs

text: Homo sapiens

text: PCR product

text: Fibroblast

text: DKC1 mutant patient iPSCs-2

text: DMSO


sample 72

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: TERC

text: Fibroblast derived iPSCs

text: Homo sapiens

text: PCR product

text: Fibroblast

text: DKC1 mutant patient iPSCs-3

text: DMSO


sample 73

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: Fibroblast derived iPSCs

text: Homo sapiens

text: PCR product

text: Fibroblast

text: DMSO


sample 74

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: Fibroblast derived iPSCs

text: Homo sapiens

text: PCR product

text: Fibroblast

text: No treatment


sample 75

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: 5' half of scaRNA13

text: Fibroblast derived iPSCs

text: Homo sapiens

text: 2_sc-NHSF-3del-clone1-1F_S2_L001_R1_001.fastq.gz

text: 2_sc-NHSF-3del-clone1-1F_S2_L001_R2_001.fastq.gz

text: PCR product

text: Fibroblast

text: CRISPR-Cas9 mediated deletion of 138-273nt of scaRNA13


sample 76

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: 5' half of scaRNA13

text: Fibroblast derived iPSCs

text: Homo sapiens

text: 3_sc-NHSF-3del-clone2-1F_S3_L001_R1_001.fastq.gz

text: 3_sc-NHSF-3del-clone2-1F_S3_L001_R2_001.fastq.gz

text: PCR product

text: Fibroblast


sample 77

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: 5' half of scaRNA13

text: Fibroblast derived iPSCs

text: Homo sapiens

text: 5_sc-1774d-3del-clone1-1F_S5_L001_R1_001.fastq.gz

text: 5_sc-1774d-3del-clone1-1F_S5_L001_R2_001.fastq.gz

text: PCR product

text: Fibroblast

text: DKC1 mutant patient iPSCs-1-scaRNA13-3'del-clone1


sample 78

text: Boston Childrens Hospital

text: live

text: Human

text: Agarwal Lab

text: Induced Pluripotent Stem Cells

text: 5' half of scaRNA13

text: Fibroblast derived iPSCs

text: Homo sapiens

text: 6_sc-1774d-3del-clone2-1F_S6_L001_R1_001.fastq.gz

text: 6_sc-1774d-3del-clone2-1F_S6_L001_R2_001.fastq.gz

text: PCR product

text: Fibroblast

text: DKC1 mutant patient iPSCs-1-scaRNA13-3'del-clone2


fmdv tdf 041

text: University of Veterinary and Animal Sciences

text: live

text: Pathogen.cl

text: Anam Munir

text: Pakistan: Lahore

text: Cattle

text: Foot & Mouth Disease

text: mouth epithelial scrapings

text: Livestock & Dairy Development herd

text: 31.5204 N 74.3587 E

text: Foot-and-mouth disease virus

text: Type O

characteristic: strain

text: Pathogen: clinical or host-associated sample from Foot-and-mouth disease virus


text: GenomeTrakr Project: Maryland Department of Health and Mental Hygiene

text: live

text: Pathogen.env

text: FDA

text: USA: GA

text: Sub 1

text: Potable bulk water

text: Legionella pneumophila

characteristic: serovar

text: Pathogen: environmental/food/other sample from Legionella pneumophila


text: live

text: Pathogen.env

text: FDA

text: USA: GA

text: Sub 2

text: Potable bulk water

text: Legionella pneumophila


text: live

text: Pathogen.env

text: FDA

text: USA: GA

text: Sub 3

text: Potable bulk water

text: Legionella pneumophila


text: live

text: Pathogen.env

text: FDA

text: USA: GA

text: Sub 4

text: Potable bulk water

text: Legionella pneumophila


text: live

text: Pathogen.env

text: FDA

text: USA: GA

text: Sub 5

text: Potable bulk water

text: Legionella taurinensis

text: Pathogen: environmental/food/other sample from Legionella taurinensis


text: live

text: Pathogen.env

text: FDA

text: USA: GA

text: Sub 6

text: Potable bulk water

text: Legionella taurinensis


text: live

text: Pathogen.env

text: FDA

text: USA: GA

text: Sub 7

text: Potable bulk water

text: Legionella pneumophila


text: live

text: Pathogen.env

text: FDA

text: USA: GA

text: Sub 8

text: Potable bulk water

text: Legionella pneumophila


text: live

text: Pathogen.env

text: FDA

text: USA: GA

text: Sub 9

text: Potable bulk water

text: Legionella pneumophila


text: live

text: Pathogen.env

text: FDA

text: USA: GA

text: Sub 10

text: Potable bulk water

text: Legionella pneumophila


text: live

text: Pathogen.env

text: FDA

text: USA: GA

text: Sub 11

text: Potable bulk water

text: Legionella pneumophila


text: live

text: Pathogen.env

text: FDA

text: USA: GA

text: Sub 12

text: Potable bulk water

text: Legionella pneumophila


text: live

text: Pathogen.env

text: FDA

text: USA: GA

text: Sub 13

text: Potable bulk water

text: Legionella pneumophila


text: live

text: Pathogen.env

text: FDA

text: USA: GA

text: Sub 1

text: Biofilm swab

text: Legionella taurinensis


text: live

text: Pathogen.env

text: FDA

text: USA: GA

text: Sub 2

text: Biofilm swab

text: Legionella taurinensis


text: live

text: Pathogen.env

text: FDA

text: USA: GA

text: Sub 3

text: Biofilm swab

text: Legionella pneumophila


text: live

text: Pathogen.env

text: FDA

text: USA: GA

text: Sub 7

text: Biofilm swab

text: Legionella taurinensis


text: live

text: Pathogen.env

text: FDA

text: USA: GA

text: Sub 8

text: Biofilm swab

text: Legionella pneumophila


text: Mississippi Public Health Laboratory

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

characteristic: host

text: whole organism

text: sputum

text: Enterobacter sp. 2022SY-00037

text: Microbe sample from Enterobacter sp. 2022SY-00037


text: Mississippi Public Health Laboratory

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: whole organism

text: tissue

text: Enterobacter cloacae

text: Microbe sample from Enterobacter cloacae


JCHEC

text: Wuhan University

text: live

text: Plant

text: young

text: SJLC

characteristic: ecotype

text: China: Tibet

text: JCHEC

text: Saxifraga sessiliflora

text: leaf

characteristic: tissue

text: Saxifraga sessiliflora clean data


QGHEC

text: Wuhan University

text: live

text: Plant

characteristic: SRA accession

text: young

text: SJLC

text: China: Tibet

text: QGHEC

text: Saxifraga saginoides

text: leaf

text: Saxifraga saginoides clean data


text: Nankai University

text: live

text: Microbe, viral or environmental

text: Total RNA of each sample was extracted to generate RNA libraries. The library preparations were sequenced on an Illumina Hiseq platform. Reference genome, P. aeruginosa P8W (NZ_CP081477.2).

characteristic: description

text: China:Tianjin,Affiliated Hospital of Nankai University

text: Severely burned patient

text: hospital

text: 39.0674 N 117.2693 E

text: Pseudomonas aeruginosa

characteristic: organism

text: obligate aerobe

text: Cells were grown to OD600nm of 0.8 and harvested by centrifugation. The collected cells were immediately subjected to freezing in liquid nitrogen and delivered to Novogene (Beijing) in dry ice for transcriptome analysis.

text: Microbe sample from Pseudomonas aeruginosa


characteristic: External Id

text: Nankai University

text: live

text: Microbe, viral or environmental

text: Severely burned patient

text: hospital

text: 39.0674 N 117.2695 E

text: Pseudomonas aeruginosa

text: obligate aerobe

text: Cells were grown to OD600nm of 0.10 and harvested by centrifugation. The collected cells were immediately subjected to freezing in liquid nitrogen and delivered to Novogene (Beijing) in dry ice for transcriptome analysis.

characteristic: title


text: University Hospital of Cologne

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Human

characteristic: age

text: Florian Klein

text: CD19+ MACS enriched, IgG+/CD20+ B cells sorted from PBMCs, 100000 cells in total

text: Homo sapiens

text: Primary cells

text: female

characteristic: sex

text: PBMCs

text: Human sample from Homo sapiens


text: University Hospital of Cologne

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Human

characteristic: NCBI submission model

text: Florian Klein

text: Homo sapiens

text: Primary cells

text: male

text: PBMCs

text: Human sample from Homo sapiens


text: University Hospital of Cologne

text: live

text: Human

characteristic: NCBI submission package

text: Florian Klein

characteristic: isolate

text: Homo sapiens

text: Primary cells

text: PBMCs

text: Human sample from Homo sapiens


text: University Hospital of Cologne

text: live

text: Human

text: not collected

text: Florian Klein

text: Homo sapiens

text: Primary cells

text: not collected

text: PBMCs

text: Human sample from Homo sapiens


text: University Hospital of Cologne

text: live

text: Human

text: not collected

text: Florian Klein

text: MEC-1, RAMOS, SuDHL5, RI-1

text: Mix of four cell lines, 25000 cells each, 100000 cells in total

text: Homo sapiens

text: Mixed culture

text: not collected

text: Human sample from Homo sapiens


text: University Hospital of Cologne

text: live

text: Human

text: not collected

text: Florian Klein

text: CD19+ MACS enriched, IgM+/CD20+ B cells sorted from PBMCs and mixed with 10 MEC-1 (cell line) cells, 100000 cells in total

text: Homo sapiens

text: Primary cells mixed with cell line

text: not collected

text: PBMCs and cell line

text: Human sample from Homo sapiens


text: University Hospital of Cologne

text: live

text: Human

text: not collected

text: Florian Klein

text: CD19+ MACS enriched, IgM+/CD20+ B cells sorted from PBMCs and mixed with 100 MEC-1 (cell line) cells, 100000 cells in total

text: Homo sapiens

text: Primary cells mixed with cell line

text: not collected

text: PBMCs and cell line

text: Human sample from Homo sapiens


text: University Hospital of Cologne

text: live

text: Human

text: not collected

text: Florian Klein

text: CD19+ MACS enriched, IgM+/CD20+ B cells sorted from PBMCs and mixed with 1000 MEC-1 (cell line) cells, 100000 cells in total

text: Homo sapiens

text: Primary cells mixed with cell line

text: not collected

text: PBMCs and cell line

text: Human sample from Homo sapiens


text: University Hospital of Cologne

text: live

text: Human

text: not collected

text: Florian Klein

text: CD19+ MACS enriched, IgM+/CD20+ B cells sorted from PBMCs and mixed with 10000 MEC-1 (cell line) cells, 100000 cells in total

text: Homo sapiens

text: Primary cells mixed with cell line

text: not collected

text: PBMCs and cell line

text: Human sample from Homo sapiens


text: University Hospital of Cologne

text: live

text: Human

text: not collected

text: Florian Klein

text: RAMOS

text: CD19+ MACS enriched, IgM+/CD20+ B cells sorted from PBMCs and mixed with 10 RAMOS (cell line) cells, 100000 cells in total

text: Homo sapiens

text: Primary cells mixed with cell line

text: not collected

text: PBMCs and cell line

text: Human sample from Homo sapiens


text: University Hospital of Cologne

text: live

text: Human

text: not collected

text: Florian Klein

text: RAMOS

text: CD19+ MACS enriched, IgM+/CD20+ B cells sorted from PBMCs and mixed with 100 RAMOS (cell line) cells, 100000 cells in total

text: Homo sapiens

text: Primary cells mixed with cell line

text: not collected

text: PBMCs and cell line

text: Human sample from Homo sapiens


text: University Hospital of Cologne

text: live

text: Human

text: not collected

text: Florian Klein

text: RAMOS

text: CD19+ MACS enriched, IgM+/CD20+ B cells sorted from PBMCs and mixed with 1000 RAMOS (cell line) cells, 100000 cells in total

text: Homo sapiens

text: Primary cells mixed with cell line

text: not collected

text: PBMCs and cell line

text: Human sample from Homo sapiens


text: University Hospital of Cologne

text: live

text: Human

text: not collected

text: Florian Klein

text: RAMOS

text: CD19+ MACS enriched, IgM+/CD20+ B cells sorted from PBMCs and mixed with 10000 RAMOS (cell line) cells, 100000 cells in total

text: Homo sapiens

text: Primary cells mixed with cell line

text: not collected

text: PBMCs and cell line

text: Human sample from Homo sapiens


BR

text: Hunan Normal University

text: live

text: Model organism or animal

text: hybrid rare gudgeon

characteristic: breed

text: female

text: liver

text: Model organism or animal sample from Megalobrama amblycephala x Gobiocypris rarus


text: Rutgers University

text: live

text: Viral

text: USA: mid-Atlantic

text: wastewater influent

text: wastewater treatment plant

text: Staphylococcus aureus RN4220

text: Staphylococcus phage StAP1

text: Viral sample from Staphylococcus phage StAP1


text: University of Portsmouth

text: live

text: Metagenome or environmental

text: Spain:Barcelona

text: wastewater

text: 41.547540 N 2.178035 E

text: wastewater metagenome

text: Metagenome or environmental sample from wastewater metagenome


text: Labrador tea - mesic

text: Pj-Sb/Labrador Tea Mesic

text: University of Wisconsin-Madison

text: live

text: Long

characteristic: Interval

text: Upland

text: PINUBAN

text: Mesic

text: MIMS.me

text: M

text: conifers (e.g. pine,spruce,fir,cypress)

text: Labrador tea - mesic

text: Beckingham, J. D., and J. H. Archibald. 1996. Fieldguide to ecosites of Northern Alberta. NaturalResources Canada, Canadian Forest Service,Northern Forestry Centre, Edmonton, Alberta,Canada.

text: 0.065-0.115 m

characteristic: depth

text: Keywords: GSC:MIxS;MIMS:5.0

text: 257 m

characteristic: elev

text: subpolar coniferous forest biome [ENVO:01000250]

text: soil [ENVO:00001998]

text: forest soil [ENVO:00002261] | burned soil [ENVO:00005760]

text: yes

characteristic: fire

text: Canada: Northwest Territories

text: A horizon

characteristic: horizon

text: subjective

text: 60.613978 N 114.418814 W

text: Qiagen / MoBio PowerLyzer PowerSoil DNA extraction kit

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 30

text: FWD: AATGATACGGCGACCACCGAGATCTACACNNNNNNNNTATGGTAATTGTGTGYCAGCMGCCGCGGTAA REV: CAAGCAGAAGACGGCATACGAGATNNNNNNNNAGTCAGCCAGCCGGACTACNVGGGTWTCTAAT

characteristic: ph

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: Preserved in Lifeguard soil preservation solution, as cold as possible in field, then frozen, and finally -80°C

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Labrador tea - mesic

text: Pj-Sb/Labrador Tea Mesic

characteristic: External Id

text: University of Wisconsin-Madison

characteristic: INSDC center name

text: live

text: Long

text: Upland

text: PINUBAN

text: Mesic

text: MIMS.me

characteristic: SRA accession

text: O

text: conifers (e.g. pine,spruce,fir,cypress)

text: Labrador tea - mesic

text: 0-0.065 m

text: Keywords: GSC:MIxS;MIMS:5.0

characteristic: description

text: 257 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 60.613978 N 114.418814 W

text: soil metagenome

characteristic: organism

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 31

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA

characteristic: title


text: Labrador tea - mesic

text: Pj-Sb/Labrador Tea Mesic

text: University of Wisconsin-Madison

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Short

text: Upland

text: POPUTRE

text: Submesic

text: MIMS.me

text: M

text: intermixed hardwood and conifers

text: Labrador tea - mesic

text: 0.01-0.06 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 250 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: A horizon

text: subjective

text: 60.61778 N 114.411256 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 32

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Labrador tea - mesic

text: Pj-Sb/Labrador Tea Mesic

text: University of Wisconsin-Madison

text: live

text: Short

text: Upland

text: POPUTRE

text: Submesic

text: MIMS.me

characteristic: NCBI submission model

characteristic: NCBI submission package

text: O

text: intermixed hardwood and conifers

text: Labrador tea - mesic

text: 0-0.01 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 250 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 60.61778 N 114.411256 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 33

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Horsetail

text: Sw/Horsetail

text: University of Wisconsin-Madison

text: live

text: Long

characteristic: Interval

text: Wetland

text: PICEGLA

text: Submesic

text: MIMS.me

text: M

text: swamp (permanent or semi-permanent water body dominated by woody plants)

text: Horsetail

text: 0.0433-0.0933 m

characteristic: depth

text: Keywords: GSC:MIxS;MIMS:5.0

text: 250 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: A horizon

text: subjective

text: 60.5783 N 114.440612 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 34

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Horsetail

text: Sw/Horsetail

text: University of Wisconsin-Madison

text: live

text: Long

text: Wetland

text: PICEGLA

text: Submesic

text: MIMS.me

text: O

text: Horsetail

text: 0-0.0433 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 250 m

characteristic: elev

text: soil [ENVO:00001998]

text: yes

characteristic: fire

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 60.5783 N 114.440612 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 35

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Horsetail

text: Sw/Horsetail

text: University of Wisconsin-Madison

text: live

text: Short

text: Wetland

text: POPUBAL

text: Subhygric

text: MIMS.me

text: M

text: Horsetail

text: 0.005-0.055 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 249 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: A horizon

characteristic: horizon

text: subjective

text: 60.618799 N 114.401926 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 36

characteristic: ph

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Horsetail

text: Sw/Horsetail

characteristic: External Id

text: University of Wisconsin-Madison

characteristic: INSDC center name

text: live

text: Short

text: Wetland

text: POPUBAL

text: Subhygric

text: MIMS.me

text: O

text: Horsetail

text: 0-0.005 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 249 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 60.618799 N 114.401926 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 37

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Dogwood - Pb-Sw

text: Pb-Sw/Bracted Honeysuckle/fern

text: University of Wisconsin-Madison

text: live

text: Long

text: Wetland

text: POPUTRE/PINUBAN

text: Hygric

text: MIMS.me

characteristic: SRA accession

text: M

text: Dogwood - Pb-Sw

text: 0.055-0.105 m

text: Keywords: GSC:MIxS;MIMS:5.0

characteristic: description

text: 251 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: A horizon

text: subjective

text: 60.56296 N 114.42266 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 38

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Dogwood - Pb-Sw

text: Pb-Sw/Bracted Honeysuckle/fern

text: University of Wisconsin-Madison

text: live

text: Long

text: Wetland

text: POPUTRE/PINUBAN

text: Hygric

text: MIMS.me

text: O

text: Dogwood - Pb-Sw

text: 0-0.055 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 251 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 60.56296 N 114.42266 W

text: soil metagenome

characteristic: organism

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 39

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA

characteristic: title


text: Dogwood - Pb-Sw

text: Pb-Sw/Bracted Honeysuckle/fern

text: University of Wisconsin-Madison

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Short

text: Wetland

text: PINUBAN/POPUTRE

text: Subhydric

text: MIMS.me

text: M

text: Dogwood - Pb-Sw

text: Beckingham, J. D., and J. H. Archibald. 1996. Fieldguide to ecosites of Northern Alberta. NaturalResources Canada, Canadian Forest Service,Northern Forestry Centre, Edmonton, Alberta,Canada.

text: 0.0443-0.0943 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 247 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: A horizon

text: subjective

text: 60.621822 N 114.396124 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 40

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Dogwood - Pb-Sw

text: Pb-Sw/Bracted Honeysuckle/fern

text: University of Wisconsin-Madison

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Short

text: Wetland

text: PINUBAN/POPUTRE

text: Subhydric

text: MIMS.me

text: O

text: Dogwood - Pb-Sw

text: 0-0.0443 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 247 m

text: subpolar coniferous forest biome [ENVO:01000250]

text: soil [ENVO:00001998]

text: forest soil [ENVO:00002261] | burned soil [ENVO:00005760]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 60.621822 N 114.396124 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 41

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Labrador tea - mesic

text: Pj-Sb/Labrador tea/feathermoss

text: University of Wisconsin-Madison

text: live

text: Long

text: Upland

text: PINUBAN

text: Submesic

text: MIMS.me

characteristic: NCBI submission model

characteristic: NCBI submission package

text: M

text: conifers (e.g. pine,spruce,fir,cypress)

text: Labrador tea - mesic

text: 0.0283-0.0783 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 170 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: A horizon

text: subjective

text: 62.738597 N 116.071032 W

text: Qiagen / MoBio PowerLyzer PowerSoil DNA extraction kit

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 42

text: FWD: AATGATACGGCGACCACCGAGATCTACACNNNNNNNNTATGGTAATTGTGTGYCAGCMGCCGCGGTAA REV: CAAGCAGAAGACGGCATACGAGATNNNNNNNNAGTCAGCCAGCCGGACTACNVGGGTWTCTAAT

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Labrador tea - mesic

text: Pj-Sb/Labrador tea/feathermoss

text: University of Wisconsin-Madison

text: live

text: Long

characteristic: Interval

text: Upland

text: PINUBAN

text: Submesic

text: MIMS.me

text: O

text: conifers (e.g. pine,spruce,fir,cypress)

text: Labrador tea - mesic

text: 0-0.0283 m

characteristic: depth

text: Keywords: GSC:MIxS;MIMS:5.0

text: 170 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 62.738597 N 116.071032 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 43

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: Preserved in Lifeguard soil preservation solution, as cold as possible in field, then frozen, and finally -80°C

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Labrador tea - mesic

text: Pj-Sb/green alder/feathermoss

text: University of Wisconsin-Madison

text: live

text: Short

text: Upland

text: PINUBAN

text: Subxeric

text: MIMS.me

text: M

text: conifers (e.g. pine,spruce,fir,cypress)

text: Labrador tea - mesic

text: 0.085-0.135 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 167 m

characteristic: elev

text: soil [ENVO:00001998]

text: yes

characteristic: fire

text: Canada: Northwest Territories

text: A horizon

text: subjective

text: 62.778261 N 116.09681 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 44

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Labrador tea - mesic

text: Pj-Sb/green alder/feathermoss

text: University of Wisconsin-Madison

text: live

text: Short

text: Upland

text: PINUBAN

text: Subxeric

text: MIMS.me

text: O

text: conifers (e.g. pine,spruce,fir,cypress)

text: Labrador tea - mesic

text: 0-0.085 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 167 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

characteristic: horizon

text: subjective

text: 62.778261 N 116.09681 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 45

characteristic: ph

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Lichen

text: Pj/bearberry/lichen

characteristic: External Id

text: University of Wisconsin-Madison

characteristic: INSDC center name

text: live

text: Long

text: Upland

text: PINUBAN

text: Subxeric

text: MIMS.me

text: M

text: conifers (e.g. pine,spruce,fir,cypress)

text: Lichen

text: 0.025-0.075 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 172 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: A horizon

text: subjective

text: 62.741151 N 116.076079 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 46

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Lichen

text: Pj/bearberry/lichen

text: University of Wisconsin-Madison

text: live

text: Long

text: Upland

text: PINUBAN

text: Subxeric

text: MIMS.me

characteristic: SRA accession

text: O

text: conifers (e.g. pine,spruce,fir,cypress)

text: Lichen

text: 0-0.025 m

text: Keywords: GSC:MIxS;MIMS:5.0

characteristic: description

text: 172 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 62.741151 N 116.076079 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 47

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Lichen

text: Pj/bearberry/lichen

text: University of Wisconsin-Madison

text: live

text: Short

text: Upland

text: PINUBAN

text: Subxeric

text: MIMS.me

text: M

text: conifers (e.g. pine,spruce,fir,cypress)

text: Lichen

text: 0.005-0.055 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 172 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: A horizon

text: subjective

text: 62.74564 N 116.077931 W

text: soil metagenome

characteristic: organism

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 48

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA

characteristic: title


text: Lichen

text: Pj/bearberry/lichen

text: University of Wisconsin-Madison

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Short

text: Upland

text: PINUBAN

text: Subxeric

text: MIMS.me

text: O

text: conifers (e.g. pine,spruce,fir,cypress)

text: Lichen

text: 0-0.005 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 172 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 62.74564 N 116.077931 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 49

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Treed poor fen

text: Sb-Lt/dwarf birch/sedge/peat moss

text: University of Wisconsin-Madison

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Long

text: Wetland

text: PICEMAR

text: Hygric

text: MIMS.me

text: O

text: swamp (permanent or semi-permanent water body dominated by woody plants)

text: Treed poor fen

text: 0-0.10 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 226 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 62.171845 N 116.281031 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 50

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Treed poor fen

text: Sb-Lt/dwarf birch/sedge/peat moss

text: University of Wisconsin-Madison

text: live

text: Short

text: Wetland

text: PICEMAR

text: Subhydric

text: MIMS.me

characteristic: NCBI submission model

characteristic: NCBI submission package

text: O

text: Treed poor fen

text: Beckingham, J. D., and J. H. Archibald. 1996. Fieldguide to ecosites of Northern Alberta. NaturalResources Canada, Canadian Forest Service,Northern Forestry Centre, Edmonton, Alberta,Canada.

text: 0-0.10 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 220 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 62.157862 N 116.251671 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 51

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Lichen

text: Pj/bearberry/lichen

text: University of Wisconsin-Madison

text: live

text: Long

characteristic: Interval

text: Upland

text: PINUBAN

text: Subxeric

text: MIMS.me

text: M

text: conifers (e.g. pine,spruce,fir,cypress)

text: Lichen

text: 0.0217-0.0717 m

characteristic: depth

text: Keywords: GSC:MIxS;MIMS:5.0

text: 240 m

text: subpolar coniferous forest biome [ENVO:01000250]

text: soil [ENVO:00001998]

text: forest soil [ENVO:00002261] | burned soil [ENVO:00005760]

text: yes

text: Canada: Northwest Territories

text: A horizon

text: subjective

text: 62.499045 N 113.414147 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 52

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Lichen

text: Pj/bearberry/lichen

text: University of Wisconsin-Madison

text: live

text: Long

text: Upland

text: PINUBAN

text: Subxeric

text: MIMS.me

text: O

text: conifers (e.g. pine,spruce,fir,cypress)

text: Lichen

text: 0-0.0217 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 240 m

characteristic: elev

text: soil [ENVO:00001998]

text: yes

characteristic: fire

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 62.499045 N 113.414147 W

text: Qiagen / MoBio PowerLyzer PowerSoil DNA extraction kit

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 53

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Lichen

text: Pj/bearberry/lichen

text: University of Wisconsin-Madison

text: live

text: Short

text: Upland

text: PINUBAN

text: Subxeric

text: MIMS.me

text: M

text: conifers (e.g. pine,spruce,fir,cypress)

text: Lichen

text: 0.0133-0.0633 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 240 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: A horizon

characteristic: horizon

text: subjective

text: 62.502498 N 113.421023 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 54

text: FWD: AATGATACGGCGACCACCGAGATCTACACNNNNNNNNTATGGTAATTGTGTGYCAGCMGCCGCGGTAA REV: CAAGCAGAAGACGGCATACGAGATNNNNNNNNAGTCAGCCAGCCGGACTACNVGGGTWTCTAAT

characteristic: ph

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Lichen

text: Pj/bearberry/lichen

characteristic: External Id

text: University of Wisconsin-Madison

characteristic: INSDC center name

text: live

text: Short

text: Upland

text: PINUBAN

text: Subxeric

text: MIMS.me

text: O

text: conifers (e.g. pine,spruce,fir,cypress)

text: Lichen

text: 0-0.0133 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 240 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 62.502498 N 113.421023 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 55

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: Preserved in Lifeguard soil preservation solution, as cold as possible in field, then frozen, and finally -80°C

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Treed poor fen

text: Sb-Lt/dwarf birch/sedge/peat moss

text: University of Wisconsin-Madison

text: live

text: Long

text: Wetland

text: PICEMAR

text: Hygric

text: MIMS.me

characteristic: SRA accession

text: O

text: Treed poor fen

text: 0-0.1 m

text: Keywords: GSC:MIxS;MIMS:5.0

characteristic: description

text: 228 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 62.496747 N 113.419783 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 56

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Treed poor fen

text: Sb-Lt/dwarf birch/sedge/peat moss

text: University of Wisconsin-Madison

text: live

text: Short

text: Wetland

text: PICEMAR/LARILAR

text: Hygric

text: MIMS.me

text: O

text: Treed poor fen

text: 0-0.1 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 240 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 62.503429 N 113.420535 W

text: soil metagenome

characteristic: organism

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 57

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA

characteristic: title


text: Blueberry Pj-Aw

text: Pj-Aw/blueberry-green alder

text: University of Wisconsin-Madison

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Long

text: Upland

text: PINUBAN

text: Mesic

text: MIMS.me

text: M

text: conifers (e.g. pine,spruce,fir,cypress)

text: Blueberry Pj-Aw

text: 0.0233-0.0733 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 255 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: A horizon

text: subjective

text: 61.143712 N 119.139399 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 58

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Blueberry Pj-Aw

text: Pj-Aw/blueberry-green alder

text: University of Wisconsin-Madison

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Long

text: Upland

text: PINUBAN

text: Mesic

text: MIMS.me

text: M

text: conifers (e.g. pine,spruce,fir,cypress)

text: Blueberry Pj-Aw

text: 0.0233-0.0733 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 255 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: A horizon

text: subjective

text: 61.143712 N 119.139399 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 59

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Blueberry Pj-Aw

text: Pj-Aw/blueberry-green alder

text: University of Wisconsin-Madison

text: live

text: Long

text: Upland

text: PINUBAN

text: Mesic

text: MIMS.me

characteristic: NCBI submission model

characteristic: NCBI submission package

text: O

text: conifers (e.g. pine,spruce,fir,cypress)

text: Blueberry Pj-Aw

text: 0-0.0233 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 255 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 61.143712 N 119.139399 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 60

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Blueberry Pj-Aw

text: Pj-Aw/blueberry-green alder

text: University of Wisconsin-Madison

text: live

text: Long

characteristic: Interval

text: Upland

text: PINUBAN

text: Mesic

text: MIMS.me

text: O

text: conifers (e.g. pine,spruce,fir,cypress)

text: Blueberry Pj-Aw

text: 0-0.0422 m

characteristic: depth

text: Keywords: GSC:MIxS;MIMS:5.0

text: 255 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 61.143712 N 119.139399 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 61

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Treed rich fen

text: Lt/dwarf birch/sedge/golden moss

text: University of Wisconsin-Madison

text: live

text: Long

text: Wetland

text: PICEGLA

text: Subygric

text: MIMS.me

text: M

text: swamp (permanent or semi-permanent water body dominated by woody plants)

text: Treed rich fen

text: Beckingham, J. D., and J. H. Archibald. 1996. Fieldguide to ecosites of Northern Alberta. NaturalResources Canada, Canadian Forest Service,Northern Forestry Centre, Edmonton, Alberta,Canada.

text: 0.10-0.15 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 257 m

characteristic: elev

text: soil [ENVO:00001998]

text: yes

characteristic: fire

text: Canada: Northwest Territories

text: A horizon

text: subjective

text: 61.14252 N 119.139266 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 62

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Treed rich fen

text: Lt/dwarf birch/sedge/golden moss

text: University of Wisconsin-Madison

text: live

text: Long

text: Wetland

text: PICEGLA

text: Subygric

text: MIMS.me

text: O

text: Treed rich fen

text: 0-0.10 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 257 m

text: subpolar coniferous forest biome [ENVO:01000250]

text: soil [ENVO:00001998]

text: forest soil [ENVO:00002261] | burned soil [ENVO:00005760]

text: yes

text: Canada: Northwest Territories

text: O horizon

characteristic: horizon

text: subjective

text: 61.14252 N 119.139266 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 63

characteristic: ph

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Treed rich fen

text: Lt/dwarf birch/sedge/golden moss

characteristic: External Id

text: University of Wisconsin-Madison

characteristic: INSDC center name

text: live

text: Short

text: Wetland

text: POPUBAL/POPUTRE

text: Subhygric

text: MIMS.me

text: M

text: Treed rich fen

text: 0.06-0.11 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 263 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: A horizon

text: subjective

text: 61.142544 N 119.089904 W

text: Qiagen / MoBio PowerLyzer PowerSoil DNA extraction kit

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 64

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Treed rich fen

text: Lt/dwarf birch/sedge/golden moss

text: University of Wisconsin-Madison

text: live

text: Short

text: Wetland

text: POPUBAL/POPUTRE

text: Subhygric

text: MIMS.me

characteristic: SRA accession

text: O

text: Treed rich fen

text: 0-0.06 m

text: Keywords: GSC:MIxS;MIMS:5.0

characteristic: description

text: 263 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 61.142544 N 119.089904 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 65

text: FWD: AATGATACGGCGACCACCGAGATCTACACNNNNNNNNTATGGTAATTGTGTGYCAGCMGCCGCGGTAA REV: CAAGCAGAAGACGGCATACGAGATNNNNNNNNAGTCAGCCAGCCGGACTACNVGGGTWTCTAAT

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Treed rich fen

text: Lt/dwarf birch/sedge/golden moss

text: University of Wisconsin-Madison

text: live

text: Long

text: Wetland

text: PICEMAR

text: Subhygric

text: MIMS.me

text: O

text: Treed rich fen

text: 0-0.1 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 231 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 61.974893 N 118.447023 W

text: soil metagenome

characteristic: organism

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 66

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: Preserved in Lifeguard soil preservation solution, as cold as possible in field, then frozen, and finally -80°C

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA

characteristic: title


text: Treed rich fen

text: Lt/dwarf birch/sedge/golden moss

text: University of Wisconsin-Madison

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Short

text: Wetland

text: LARILAR

text: Hygric

text: MIMS.me

text: O

text: Treed rich fen

text: 0-0.1 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 228 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 61.966415 N 118.45063 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 67

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Treed bog

text: Sb/labrador tea.cloudberry/peat moss

text: University of Wisconsin-Madison

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Long

text: Wetland

text: PICEMAR/LARILAR

text: Mesic

text: MIMS.me

text: O

text: Treed bog

text: 0-0.1 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 232 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 61.975253 N 118.446378 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 68

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Treed bog

text: Sb/labrador tea.cloudberry/peat moss

text: University of Wisconsin-Madison

text: live

text: Short

text: Wetland

text: LARILAR

text: Hygric

text: MIMS.me

characteristic: NCBI submission model

characteristic: NCBI submission package

text: O

text: Treed bog

text: 0-0.1 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 229 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 61.96788 N 118.447877 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 69

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Labrador tea - mesic

text: Pj-Sb/Labrador tea/feathermoss

text: University of Wisconsin-Madison

text: live

text: Long

characteristic: Interval

text: Upland

text: PICEMAR

text: Submesic

text: MIMS.me

text: M

text: conifers (e.g. pine,spruce,fir,cypress)

text: Labrador tea - mesic

text: 0.0167-0.0667 m

characteristic: depth

text: Keywords: GSC:MIxS;MIMS:5.0

text: 259 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: A horizon

text: subjective

text: 60.14011 N 113.419232 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 70

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Labrador tea - mesic

text: Pj-Sb/Labrador tea/feathermoss

text: University of Wisconsin-Madison

text: live

text: Long

text: Upland

text: PICEMAR

text: Submesic

text: MIMS.me

text: O

text: conifers (e.g. pine,spruce,fir,cypress)

text: Labrador tea - mesic

text: 0-0.0167 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 259 m

characteristic: elev

text: soil [ENVO:00001998]

text: yes

characteristic: fire

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 60.14011 N 113.419232 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 71

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Labrador tea - mesic

text: Pj-Sb/Labrador tea/feathermoss

text: University of Wisconsin-Madison

text: live

text: Short

text: Upland

text: PICEMAR

text: Submesic

text: MIMS.me

text: M

text: conifers (e.g. pine,spruce,fir,cypress)

text: Labrador tea - mesic

text: 0.0317-0.0817 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 260 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: A horizon

characteristic: horizon

text: subjective

text: 60.135219 N 113.404954 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 72

characteristic: ph

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Labrador tea - mesic

text: Pj-Sb/Labrador tea/feathermoss

characteristic: External Id

text: University of Wisconsin-Madison

characteristic: INSDC center name

text: live

text: Short

text: Upland

text: PICEMAR

text: Submesic

text: MIMS.me

text: O

text: conifers (e.g. pine,spruce,fir,cypress)

text: Labrador tea - mesic

text: Beckingham, J. D., and J. H. Archibald. 1996. Fieldguide to ecosites of Northern Alberta. NaturalResources Canada, Canadian Forest Service,Northern Forestry Centre, Edmonton, Alberta,Canada.

text: 0-0.0317 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 260 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 60.135219 N 113.404954 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 73

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Lichen

text: Pj/bearberry/lichen

text: University of Wisconsin-Madison

text: live

text: Long

text: Upland

text: PINUBAN

text: Subxeric

text: MIMS.me

characteristic: SRA accession

text: M

text: conifers (e.g. pine,spruce,fir,cypress)

text: Lichen

text: 0.0117-0.0617 m

text: Keywords: GSC:MIxS;MIMS:5.0

characteristic: description

text: 243 m

text: subpolar coniferous forest biome [ENVO:01000250]

text: soil [ENVO:00001998]

text: yes

text: Canada: Alberta

text: A horizon

text: subjective

text: 59.160346 N 112.574247 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 74

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Lichen

text: Pj/bearberry/lichen

text: University of Wisconsin-Madison

text: live

text: Long

text: Upland

text: PINUBAN

text: Subxeric

text: MIMS.me

text: O

text: conifers (e.g. pine,spruce,fir,cypress)

text: Lichen

text: 0-0.0117 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 243 m

text: soil [ENVO:00001998]

text: forest soil [ENVO:00002261] | burned soil [ENVO:00005760]

text: yes

text: Canada: Alberta

text: O horizon

text: subjective

text: 59.160346 N 112.574247 W

text: soil metagenome

characteristic: organism

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 75

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA

characteristic: title


text: Lichen

text: Pj/bearberry/lichen

text: University of Wisconsin-Madison

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Short

text: Upland

text: POPUTRE

text: Subxeric

text: MIMS.me

text: M

text: intermixed hardwood and conifers

text: Lichen

text: 0-0.05 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 245 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Alberta

text: A horizon

text: subjective

text: 59.160835 N 112.582744 W

text: Qiagen / MoBio PowerLyzer PowerSoil DNA extraction kit

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 76

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Lichen

text: Pj/bearberry/lichen

text: University of Wisconsin-Madison

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Long

text: Upland

text: PINUBAN

text: Submesic

text: MIMS.me

text: M

text: conifers (e.g. pine,spruce,fir,cypress)

text: Lichen

text: 0.025-0.075 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 276 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: A horizon

text: subjective

text: 60.30568 N 114.102251 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 77

text: FWD: AATGATACGGCGACCACCGAGATCTACACNNNNNNNNTATGGTAATTGTGTGYCAGCMGCCGCGGTAA REV: CAAGCAGAAGACGGCATACGAGATNNNNNNNNAGTCAGCCAGCCGGACTACNVGGGTWTCTAAT

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Lichen

text: Pj/bearberry/lichen

text: University of Wisconsin-Madison

text: live

text: Long

text: Upland

text: PINUBAN

text: Submesic

text: MIMS.me

characteristic: NCBI submission model

characteristic: NCBI submission package

text: O

text: conifers (e.g. pine,spruce,fir,cypress)

text: Lichen

text: 0-0.025 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 276 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 60.30568 N 114.102251 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 78

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: Preserved in Lifeguard soil preservation solution, as cold as possible in field, then frozen, and finally -80°C

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Lichen

text: Pj/bearberry/lichen

text: University of Wisconsin-Madison

text: live

text: Short

characteristic: Interval

text: Upland

text: POPUTRE

text: Subxeric

text: MIMS.me

text: M

text: intermixed hardwood and conifers

text: Lichen

text: 0.0058-0.0558 m

characteristic: depth

text: Keywords: GSC:MIxS;MIMS:5.0

text: 280 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: A horizon

text: subjective

text: 60.294805 N 114.103506 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 79

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Lichen

text: Pj/bearberry/lichen

text: University of Wisconsin-Madison

text: live

text: Short

text: Upland

text: POPUTRE

text: Subxeric

text: MIMS.me

text: O

text: intermixed hardwood and conifers

text: Lichen

text: 0-0.0058 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 280 m

characteristic: elev

text: soil [ENVO:00001998]

text: yes

characteristic: fire

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 60.294805 N 114.103506 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 80

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Lichen

text: Pj/bearberry/lichen

text: University of Wisconsin-Madison

text: live

text: Long

text: Upland

text: PINUBAN

text: Submesic

text: MIMS.me

text: M

text: conifers (e.g. pine,spruce,fir,cypress)

text: Lichen

text: 0.0217-0.0717 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 272 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: A horizon

characteristic: horizon

text: subjective

text: 60.336168 N 114.156273 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 81

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Lichen

text: Pj/bearberry/lichen

characteristic: External Id

text: University of Wisconsin-Madison

text: live

text: Long

text: Upland

text: PINUBAN

text: Submesic

text: MIMS.me

text: O

text: conifers (e.g. pine,spruce,fir,cypress)

text: Lichen

text: 0-0.0217 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 272 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 60.336168 N 114.156273 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 82

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Lichen

text: Pj/bearberry/lichen

text: University of Wisconsin-Madison

characteristic: INSDC center name

text: live

text: Short

text: Upland

text: PINUBAN

text: Submesic

text: MIMS.me

text: M

text: conifers (e.g. pine,spruce,fir,cypress)

text: Lichen

text: 0.0217-0.0717 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 279 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: A horizon

text: subjective

text: 60.296923 N 114.096977 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 83

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Lichen

text: Pj/bearberry/lichen

text: University of Wisconsin-Madison

text: live

text: Short

text: Upland

text: PINUBAN

text: Submesic

text: MIMS.me

characteristic: SRA accession

text: O

text: conifers (e.g. pine,spruce,fir,cypress)

text: Lichen

text: Beckingham, J. D., and J. H. Archibald. 1996. Fieldguide to ecosites of Northern Alberta. NaturalResources Canada, Canadian Forest Service,Northern Forestry Centre, Edmonton, Alberta,Canada.

text: 0-0.0217 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 279 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 60.296923 N 114.096977 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 84

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Low-bush cranberry Aw-Sw

text: Aw-Sw/rose

text: University of Wisconsin-Madison

text: live

text: Long

text: Upland

text: POPUTRE

text: Mesic

text: MIMS.me

text: M

text: intermixed hardwood and conifers

text: Low-bush cranberry Aw-Sw

text: 0.03-0.08 m

text: Keywords: GSC:MIxS;MIMS:5.0

characteristic: description

text: 202 m

text: subpolar coniferous forest biome [ENVO:01000250]

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: A horizon

text: subjective

text: 60.136079 N 112.668628 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 85

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Low-bush cranberry Aw-Sw

text: Aw-Sw/rose

text: University of Wisconsin-Madison

text: live

text: Long

text: Upland

text: POPUTRE

text: Mesic

text: MIMS.me

text: O

text: intermixed hardwood and conifers

text: Low-bush cranberry Aw-Sw

text: 0-0.03 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 202 m

text: soil [ENVO:00001998]

text: forest soil [ENVO:00002261] | burned soil [ENVO:00005760]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 60.136079 N 112.668628 W

text: soil metagenome

characteristic: organism

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 86

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Low-bush cranberry Aw-Sw

text: Aw-Sw/beaked willow

text: University of Wisconsin-Madison

text: live

text: Short

text: Upland

text: POPUTRE

text: Mesic

text: MIMS.me

text: M

text: intermixed hardwood and conifers

text: Low-bush cranberry Aw-Sw

text: 0.0177-0.0677 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 207 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: A horizon

text: subjective

text: 60.137165 N 112.662001 W

text: Qiagen / MoBio PowerLyzer PowerSoil DNA extraction kit

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 87

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA

characteristic: title


text: Low-bush cranberry Aw-Sw

text: Aw-Sw/beaked willow

text: University of Wisconsin-Madison

characteristic: INSDC first public

text: live

text: Short

text: Upland

text: POPUTRE

text: Mesic

text: MIMS.me

text: O

text: intermixed hardwood and conifers

text: Low-bush cranberry Aw-Sw

text: 0-0.0177 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 207 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 60.137165 N 112.662001 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 88

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Low-bush cranberry Aw-Sw

text: Aw-Sw/forb

text: University of Wisconsin-Madison

characteristic: INSDC last update

text: live

text: Long

text: Upland

text: PICEMAR/POPUTRE

text: Subygric

text: MIMS.me

text: M

text: intermixed hardwood and conifers

text: Low-bush cranberry Aw-Sw

text: 0.05-0.1 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 229 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: A horizon

text: subjective

text: 60.05938 N 112.780787 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 89

text: FWD: AATGATACGGCGACCACCGAGATCTACACNNNNNNNNTATGGTAATTGTGTGYCAGCMGCCGCGGTAA REV: CAAGCAGAAGACGGCATACGAGATNNNNNNNNAGTCAGCCAGCCGGACTACNVGGGTWTCTAAT

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Low-bush cranberry Aw-Sw

text: Aw-Sw/forb

text: University of Wisconsin-Madison

characteristic: INSDC secondary accession

text: live

text: Long

text: Upland

text: PICEMAR/POPUTRE

text: Subygric

text: MIMS.me

text: O

text: intermixed hardwood and conifers

text: Low-bush cranberry Aw-Sw

text: 0-0.05 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 229 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 60.05938 N 112.780787 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 90

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: Preserved in Lifeguard soil preservation solution, as cold as possible in field, then frozen, and finally -80°C

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Low-bush cranberry Aw-Sw

text: Aw-Sw/forb

text: University of Wisconsin-Madison

text: live

characteristic: INSDC status

text: Short

text: Upland

text: POPUTRE

text: Mesic

text: MIMS.me

text: M

text: intermixed hardwood and conifers

text: Low-bush cranberry Aw-Sw

text: 0.0067-0.0567 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 203 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: A horizon

text: subjective

text: 60.134274 N 112.664855 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 91

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Low-bush cranberry Aw-Sw

text: Aw-Sw/forb

text: University of Wisconsin-Madison

text: live

text: Short

text: Upland

text: POPUTRE

text: Mesic

text: MIMS.me

characteristic: NCBI submission model

text: O

text: intermixed hardwood and conifers

text: Low-bush cranberry Aw-Sw

text: 0-0.0067 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 203 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 60.134274 N 112.664855 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 92

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Blueberry Pj-Aw

text: Pj-Aw/blueberry-bearberry

text: University of Wisconsin-Madison

text: live

text: Long

text: Upland

text: PINUBAN

text: Submesic

text: MIMS.me

characteristic: NCBI submission package

text: M

text: conifers (e.g. pine,spruce,fir,cypress)

text: Blueberry Pj-Aw

text: 0.015-0.065 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 268 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: A horizon

text: subjective

text: 60.164268 N 113.680968 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 93

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Blueberry Pj-Aw

text: Pj-Aw/blueberry-bearberry

text: University of Wisconsin-Madison

text: live

text: Long

characteristic: Interval

text: Upland

text: PINUBAN

text: Submesic

text: MIMS.me

text: O

text: conifers (e.g. pine,spruce,fir,cypress)

text: Blueberry Pj-Aw

text: 0-0.015 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 268 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 60.164268 N 113.680968 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 94

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Blueberry Sw-Pj

text: Sw-Pj/blueberry-bearberry

text: University of Wisconsin-Madison

text: live

text: Short

text: Upland

text: PINUBAN

text: Subxeric

text: MIMS.me

text: M

text: conifers (e.g. pine,spruce,fir,cypress)

text: Blueberry Sw-Pj

text: Beckingham, J. D., and J. H. Archibald. 1996. Fieldguide to ecosites of Northern Alberta. NaturalResources Canada, Canadian Forest Service,Northern Forestry Centre, Edmonton, Alberta,Canada.

text: 0.0033-0.0533 m

characteristic: depth

text: Keywords: GSC:MIxS;MIMS:5.0

text: 265 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: A horizon

text: subjective

text: 60.16987 N 113.70436 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 95

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Blueberry Sw-Pj

text: Sw-Pj/blueberry-bearberry

text: University of Wisconsin-Madison

text: live

text: Short

text: Upland

text: PINUBAN

text: Subxeric

text: MIMS.me

text: O

text: conifers (e.g. pine,spruce,fir,cypress)

text: Blueberry Sw-Pj

text: 0-0.0033 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 265 m

characteristic: elev

text: subpolar coniferous forest biome [ENVO:01000250]

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 60.16987 N 113.70436 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 96

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Treed poor fen

text: Sb-Lt/dwarf birch/sedge/peat moss

text: University of Wisconsin-Madison

text: live

text: Long

text: Wetland

text: PICEMAR/LARILAR

text: Subhydric

text: MIMS.me

text: O

text: swamp (permanent or semi-permanent water body dominated by woody plants)

text: Treed poor fen

text: 0-0.10 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 268 m

text: soil [ENVO:00001998]

text: forest soil [ENVO:00002261] | burned soil [ENVO:00005760]

text: yes

characteristic: fire

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 60.165456 N 113.680703 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 97

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Treed poor fen

text: Sb-Lt/dwarf birch/sedge/peat moss

text: University of Wisconsin-Madison

text: live

text: Short

text: Wetland

text: PICEMAR

text: Hydric

text: MIMS.me

text: B

text: Treed poor fen

text: 0-0.10 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 266 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

characteristic: horizon

text: subjective

text: 60.168977 N 113.706332 W

text: Qiagen / MoBio PowerLyzer PowerSoil DNA extraction kit

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 98

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Treed poor fen

text: Sb-Lt/dwarf birch/sedge/peat moss

characteristic: External Id

text: University of Wisconsin-Madison

text: live

text: Short

text: Wetland

text: PICEMAR

text: Hydric

text: MIMS.me

text: UB

text: Treed poor fen

text: 0-0.10 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 266 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 60.168977 N 113.706332 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 99

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Lichen

text: Pj/bearberry/lichen

text: University of Wisconsin-Madison

characteristic: INSDC center name

text: live

text: Long

text: Upland

text: PINUBAN

text: Mesic

text: MIMS.me

text: M

text: conifers (e.g. pine,spruce,fir,cypress)

text: Lichen

text: 0.015-0.065 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 268 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: A horizon

text: subjective

text: 60.239685 N 113.902635 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 100

text: FWD: AATGATACGGCGACCACCGAGATCTACACNNNNNNNNTATGGTAATTGTGTGYCAGCMGCCGCGGTAA REV: CAAGCAGAAGACGGCATACGAGATNNNNNNNNAGTCAGCCAGCCGGACTACNVGGGTWTCTAAT

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Lichen

text: Pj/bearberry/lichen

text: University of Wisconsin-Madison

text: live

text: Long

text: Upland

text: PINUBAN

text: Mesic

text: MIMS.me

characteristic: SRA accession

text: O

text: conifers (e.g. pine,spruce,fir,cypress)

text: Lichen

text: 0-0.015 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 268 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 60.239685 N 113.902635 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 101

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: Preserved in Lifeguard soil preservation solution, as cold as possible in field, then frozen, and finally -80°C

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Lichen

text: Pj/bearberry/lichen

text: University of Wisconsin-Madison

text: live

text: Short

text: Upland

text: POPUTRE

text: Submesic

text: MIMS.me

text: M

text: intermixed hardwood and conifers

text: Lichen

text: 0.0023-0.0523 m

text: Keywords: GSC:MIxS;MIMS:5.0

characteristic: description

text: 279 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: A horizon

text: subjective

text: 60.228584 N 113.927788 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 102

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Lichen

text: Pj/bearberry/lichen

text: University of Wisconsin-Madison

text: live

text: Short

text: Upland

text: POPUTRE

text: Submesic

text: MIMS.me

text: O

text: intermixed hardwood and conifers

text: Lichen

text: 0-0.0023 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 279 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 60.228584 N 113.927788 W

text: soil metagenome

characteristic: organism

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 103

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Blueberry Pj-Aw

text: Pj-Aw/blueberry-bearberry

text: University of Wisconsin-Madison

text: live

text: Long

text: Upland

text: PINUBAN

text: Submesic

text: MIMS.me

text: M

text: conifers (e.g. pine,spruce,fir,cypress)

text: Blueberry Pj-Aw

text: 0.07-0.12 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 270 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: A horizon

text: subjective

text: 60.272088 N 113.995944 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 104

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA

characteristic: title


text: Blueberry Pj-Aw

text: Pj-Aw/blueberry-bearberry

text: University of Wisconsin-Madison

characteristic: INSDC first public

text: live

text: Long

text: Upland

text: PINUBAN/POPUTRE

text: Submesic

text: MIMS.me

text: O

text: intermixed hardwood and conifers

text: Blueberry Pj-Aw

text: Beckingham, J. D., and J. H. Archibald. 1996. Fieldguide to ecosites of Northern Alberta. NaturalResources Canada, Canadian Forest Service,Northern Forestry Centre, Edmonton, Alberta,Canada.

text: 0-0.07 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 270 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 60.272088 N 113.995944 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 105

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Blueberry Pj-Aw

text: Pj-Aw/blueberry-bearberry

text: University of Wisconsin-Madison

characteristic: INSDC last update

text: live

text: Short

text: Upland

text: PINUBAN

text: Subxeric

text: MIMS.me

text: M

text: conifers (e.g. pine,spruce,fir,cypress)

text: Blueberry Pj-Aw

text: 0-0.05 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 266 m

text: subpolar coniferous forest biome [ENVO:01000250]

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: A horizon

text: subjective

text: 60.260533 N 113.972932 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 106

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Blueberry Pj-Aw

text: Pj-Aw/blueberry-bearberry

text: University of Wisconsin-Madison

characteristic: INSDC secondary accession

text: live

text: Long

text: Upland

text: PINUBAN

text: Submesic

text: MIMS.me

text: M

text: conifers (e.g. pine,spruce,fir,cypress)

text: Blueberry Pj-Aw

text: 0.0233-0.0733 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 273 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: A horizon

text: subjective

text: 60.318709 N 114.126761 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 107

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Blueberry Pj-Aw

text: Pj-Aw/blueberry-bearberry

text: University of Wisconsin-Madison

text: live

characteristic: INSDC status

text: Long

text: Upland

text: PINUBAN

text: Submesic

text: MIMS.me

text: O

text: conifers (e.g. pine,spruce,fir,cypress)

text: Blueberry Pj-Aw

text: 0-0.0233 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 273 m

text: soil [ENVO:00001998]

text: forest soil [ENVO:00002261] | burned soil [ENVO:00005760]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 60.318709 N 114.126761 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 108

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Blueberry Pj-Aw

text: Pj-Aw/blueberry-bearberry

text: University of Wisconsin-Madison

text: live

text: Short

text: Upland

text: POPUTRE

text: Subxeric

text: MIMS.me

characteristic: NCBI submission model

text: M

text: intermixed hardwood and conifers

text: Blueberry Pj-Aw

text: 0-0.05 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 275 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: A horizon

text: subjective

text: 60.311247 N 114.114144 W

text: Qiagen / MoBio PowerLyzer PowerSoil DNA extraction kit

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 109

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Blueberry Pj-Aw

text: Pj-Aw/blueberry-bearberry

text: University of Wisconsin-Madison

text: live

text: Long

text: Upland

text: POPUTRE/PINUBAN

text: Mesic

text: MIMS.me

characteristic: NCBI submission package

text: M

text: intermixed hardwood and conifers

text: Blueberry Pj-Aw

text: 0.0367-0.0867 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 273 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: A horizon

text: subjective

text: 60.325803 N 114.139268 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 110

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Blueberry Pj-Aw

text: Pj-Aw/blueberry-bearberry

text: University of Wisconsin-Madison

text: live

text: Long

characteristic: Interval

text: Upland

text: POPUTRE/PINUBAN

text: Mesic

text: MIMS.me

text: O

text: intermixed hardwood and conifers

text: Blueberry Pj-Aw

text: 0-0.0367 m

text: Keywords: GSC:MIxS;MIMS:5.0

text: 273 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: O horizon

text: subjective

text: 60.325803 N 114.139268 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 111

text: 1:5 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: Blueberry Pj-Aw

text: Pj-Aw/blueberry-bearberry

text: University of Wisconsin-Madison

text: live

text: Short

text: Upland

text: PINUBAN/POPUTRE

text: Submesic

text: MIMS.me

text: M

text: intermixed hardwood and conifers

text: Blueberry Pj-Aw

text: 0-0.05 m

characteristic: depth

text: Keywords: GSC:MIxS;MIMS:5.0

text: 274 m

text: soil [ENVO:00001998]

text: yes

text: Canada: Northwest Territories

text: A horizon

text: subjective

text: 60.312646 N 114.116021 W

text: soil metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 112

text: FWD: AATGATACGGCGACCACCGAGATCTACACNNNNNNNNTATGGTAATTGTGTGYCAGCMGCCGCGGTAA REV: CAAGCAGAAGACGGCATACGAGATNNNNNNNNAGTCAGCCAGCCGGACTACNVGGGTWTCTAAT

text: 1:2 soil dry mass to DI water

text: Metal core, 5.5 cm i.d.

text: 250 mg

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: University of Wisconsin-Madison

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:5.0

text: metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 113

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: University of Wisconsin-Madison

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:5.0

text: metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 114

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: University of Wisconsin-Madison

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:5.0

text: metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 115

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: University of Wisconsin-Madison

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:5.0

text: metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 116

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


text: University of Wisconsin-Madison

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:5.0

text: metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 117

text: Illumina MiSeq 2x250 PE

text: 16S rRNA


Multicom

text: University of Wisconsin-Madison

text: live

text: MIMS.me

text: Multicom

text: Keywords: GSC:MIxS;MIMS:5.0

text: metagenome

text: initial denaturation:98_2; denaturation:98_0.5; annealing:58_0.25; elongation:72_0.167; final elongation:72_2; total cycles: 118

text: Illumina MiSeq 2x250 PE

text: 16S rRNA

text: Multicom


text: Fujian Agriculture and Forestry University

text: live

text: Metagenome or environmental

text: China:Fuzhou

characteristic: isolate

text: root metagenome

text: Root

characteristic: tissue

text: Metagenome or environmental sample from root metagenome