text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069555/2022

text: clinical

text: Baseline surveillance


status: PUBLIC

characteristic: External Id

text: California Department of Public Health

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: CDPH VBL

tag: attribute

text: USA: California

text: Homo sapiens

characteristic: host

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069556/2022

characteristic: isolate

text: clinical

characteristic: organism

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2

characteristic: title


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069557/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069558/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069559/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069560/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069561/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069562/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069563/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069564/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069566/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069567/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069568/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069569/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069570/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069571/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069572/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069573/2022

text: clinical

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069574/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069575/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069576/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069577/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069578/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069579/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069580/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069581/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069582/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069583/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069584/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069585/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069587/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069588/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069589/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069592/2022

text: clinical

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069593/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069595/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069596/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069597/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069598/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069599/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069601/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069602/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069603/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069604/2022

text: clinical

text: Baseline surveillance


text: California Department of Public Health

text: live

text: SARS-CoV-2: clinical or host-associated

text: CDPH VBL

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-2000069606/2022

text: clinical

text: Baseline surveillance


text: Utah Public Health Laboratory Infectious Disease submission group

text: live

text: SARS-CoV-2: wastewater surveillance

text: USA: Utah

text: wastewater

text: wastewater metagenome

text: public health surveillance community-level

text: characterize diversity of lineages and mutations across entire genome

text: UPHL

text: SARS-CoV-2: wastewater surveillance sample from wastewater metagenome

text: no

text: Promega wastewater large volume TNA capture kit,Promega automated TNA kit

text: raw wastewater

text: wastewater treatment plant

text: composite

text: UT

text: copies/L wastewater

text: N1 & N2 combined

text: no

text: IDT Research Use Only Kit (https://www.idtdna.com/pages/landing/coronavirus-research-reagents/cdc-assays)


text: live

text: SARS-CoV-2: wastewater surveillance

text: USA: Utah

text: wastewater

text: wastewater metagenome

text: UPHL

text: no

text: raw wastewater

text: wastewater treatment plant

text: grab

text: UT

text: copies/L wastewater

text: N1 & N2 combined

text: no


text: live

text: SARS-CoV-2: wastewater surveillance

text: USA: Utah

text: wastewater

text: wastewater metagenome

text: UPHL

text: no

text: raw wastewater

text: wastewater treatment plant

text: composite

text: UT

text: N1 & N2 combined

text: no


text: Minnesota Department of Health Infectious Disease Laboratory Submission Group

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: whole organism

text: Rectal Swab

text: Escherichia coli

characteristic: strain

text: Microbe sample from Escherichia coli


text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: whole organism

text: urine

text: Proteus mirabilis

text: Microbe sample from Proteus mirabilis


text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: whole organism

text: urine

text: Providencia rettgeri

text: Microbe sample from Providencia rettgeri


text: FDA CVM NARMS-North Carolina State University

text: live

text: Pathogen.env

text: animal

characteristic: SourceType

text: NCSU CVM Thakur Lab

text: USA:NC

text: Pork Chop

text: Salmonella enterica

text: Pathogen: environmental/food/other sample from Salmonella enterica


text: NJDOH PHEL-Virology's shared submissions

text: live

text: SARS-CoV-2: clinical or host-associated

text: NJDOH, Public Health and Environmental Laboratories

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22031704/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032026/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032027/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032028/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032030/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032031/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032033/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032035/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032038/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032041/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032042/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032045/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032047/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJDOH PHEL-Virology's shared submissions

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032051/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: NJDOH, Public Health and Environmental Laboratories

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032054/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032057/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032096/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032367/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032615/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032659/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032867/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032869/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032878/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032881/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032884/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032886/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJDOH PHEL-Virology's shared submissions

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032889/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: NJDOH, Public Health and Environmental Laboratories

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032892/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032893/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032895/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032558/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032559/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032561/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032572/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032574/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032577/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032581/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032583/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032588/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJDOH PHEL-Virology's shared submissions

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032593/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: NJDOH, Public Health and Environmental Laboratories

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032595/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032600/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032607/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032609/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032625/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032633/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032639/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032672/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032689/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032888/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032890/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032894/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJDOH PHEL-Virology's shared submissions

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032916/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: NJDOH, Public Health and Environmental Laboratories

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032917/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032918/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032919/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032920/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032921/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032978/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032979/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032980/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032981/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: Centers for Disease Control and Prevention Enteric Diseases Laboratory Branch

text: live

text: Pathogen.cl

text: CDC

text: USA

text: Vibrio parahaemolyticus

text: PulseNet

text: human

text: Vibrio parahaemolyticus


text: live

text: Pathogen.cl

text: CDC

text: USA

text: Vibrio vulnificus

text: PulseNet

text: human

text: Vibrio vulnificus


text: Agricultural Reasearch Council

text: live

text: Metagenome or environmental

text: South Africa: Irene

text: Ovis aries

text: rumen T1R1

text: 25.8981 S 28.1903 E

text: gut metagenome

text: Treatment1 Rep1


text: Agricultural Reasearch Council

text: live

text: Metagenome or environmental

text: South Africa: Irene

text: Ovis aries

text: rumen T1R2

text: 25.8981 S 28.1903 E

text: gut metagenome

text: Treatment1 Rep2


text: Agricultural Reasearch Council

text: live

text: Metagenome or environmental

text: South Africa: Irene

text: Ovis aries

text: rumen T1R3

text: 25.8981 S 28.1903 E

text: gut metagenome

text: Treatment1 Rep3


text: Agricultural Reasearch Council

text: live

text: Metagenome or environmental

text: South Africa: Irene

text: Ovis aries

text: rumen T2R1

text: 25.8981 S 28.1903 E

text: gut metagenome

text: Treatment2 Rep1


text: Agricultural Reasearch Council

text: live

text: Metagenome or environmental

text: South Africa: Irene

text: Ovis aries

text: rumen T2R2

text: 25.8981 S 28.1903 E

text: gut metagenome

text: Treatment2 Rep2


text: Agricultural Reasearch Council

text: live

text: Metagenome or environmental

text: South Africa: Irene

text: Ovis aries

text: rumen T2R3

text: 25.8981 S 28.1903 E

text: gut metagenome

text: Treatment2 Rep3


text: Agricultural Reasearch Council

text: live

text: Metagenome or environmental

text: South Africa: Irene

text: Ovis aries

text: rumen T3R1

text: 25.8981 S 28.1903 E

text: gut metagenome

text: Treatment3 Rep1


text: Agricultural Reasearch Council

text: live

text: Metagenome or environmental

text: South Africa: Irene

text: Ovis aries

text: rumen T3R2

text: 25.8981 S 28.1903 E

text: gut metagenome

text: Treatment3 Rep2


text: Agricultural Reasearch Council

text: live

text: Metagenome or environmental

text: South Africa: Irene

text: Ovis aries

text: rumen T3R3

text: 25.8981 S 28.1903 E

text: gut metagenome

text: Treatment3 Rep3


text: Jilin university

text: live

text: Human

text: no

characteristic: age

text: melanoma

characteristic: disease

text: Homo sapiens

text: not collected

characteristic: sex

text: skin

characteristic: tissue

text: Human sample from Homo sapiens

text: no

characteristic: treatment


characteristic: External Id

text: Jilin university

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Human

text: no

text: melanoma

text: Homo sapiens

text: not collected

text: skin

text: Human sample from Homo sapiens

text: overexpression PBX1


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

characteristic: NCBI submission package

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032750/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: USA: New Jersey

text: Homo sapiens

characteristic: host

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032752/2022

characteristic: isolate

text: clinical

characteristic: organism

text: Clinical diagnostic

text: Baseline surveillance


text: NJDOH PHEL-Virology's shared submissions

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032756/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance

characteristic: title


text: live

text: SARS-CoV-2: clinical or host-associated

text: NJDOH, Public Health and Environmental Laboratories

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032757/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032762/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032764/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032765/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032792/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032795/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032796/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033020/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033024/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033044/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033045/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033047/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: NJDOH PHEL-Virology's shared submissions

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033048/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: NJDOH, Public Health and Environmental Laboratories

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033053/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033054/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033056/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033234/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033235/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033236/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033237/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033238/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033239/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033331/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033332/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033333/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJDOH PHEL-Virology's shared submissions

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033334/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: NJDOH, Public Health and Environmental Laboratories

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033335/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033336/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033338/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: Centers for Disease Control and Prevention Enteric Diseases Laboratory Branch

text: live

text: Pathogen.cl

text: CDC

text: USA

text: Vibrio fluvialis

text: PulseNet

text: human

characteristic: strain

text: Vibrio fluvialis


text: Universidad de La Frontera

text: live

text: Metagenome or environmental

text: Wheat (Triticum aestivum var. Fritz) rhizosphere, + 0 M NaCl, control treatment

characteristic: description

text: Chile: Angol

text: Wheat rhizosphere

text: 37.82449716 S 72.66155985 W

text: metagenome

text: Bead-beating; QIAGEN PowerSoil DNA extraction kit

text: Samples were obtained by shaking soil adhered to wheat roots

text: 0.25 g


text: Universidad de La Frontera

text: live

text: Metagenome or environmental

text: Wheat (Triticum aestivum var. Fritz) rhizosphere, + 0.15 M NaCl, control treatment

text: Chile: Angol

text: Wheat rhizosphere

text: 37.82449716 S 72.66155985 W

text: metagenome

text: 0.25 g


text: Universidad de La Frontera

text: live

text: Metagenome or environmental

text: Wheat (Triticum aestivum var. Fritz) rhizosphere, + 0.25 M NaCl, control treatment

text: Chile: Angol

text: Wheat rhizosphere

text: 37.82449716 S 72.66155985 W

text: metagenome

text: 0.25 g


text: Universidad de La Frontera

text: live

text: Metagenome or environmental

text: Wheat (Triticum aestivum var. Fritz) rhizosphere, + 0 M NaCl + inoculation with Variovorax soli (5), Corticicoccus populi (6),Curtobacterium plantarum (24)

text: Chile: Angol

text: Wheat rhizosphere

text: 37.82449716 S 72.66155985 W

text: metagenome

text: 0.25 g


text: Universidad de La Frontera

text: live

text: Metagenome or environmental

text: Wheat (Triticum aestivum var. Fritz) rhizosphere, + 0.15 M NaCl, + inoculation with Variovorax soli (5), Corticicoccus populi (6),Curtobacterium plantarum (24)

text: Chile: Angol

text: Wheat rhizosphere

text: 37.82449716 S 72.66155985 W

text: metagenome

text: 0.25 g


text: Universidad de La Frontera

text: live

text: Metagenome or environmental

text: Wheat (Triticum aestivum var. Fritz) rhizosphere, + 0.25 M NaCl, + inoculation with Variovorax soli (5), Corticicoccus populi (6),Curtobacterium plantarum (24)

text: Chile: Angol

text: Wheat rhizosphere

text: 37.82449716 S 72.66155985 W

text: metagenome

text: 0.25 g


text: Universidad de La Frontera

text: live

text: Metagenome or environmental

text: Wheat (Triticum aestivum var. Fritz) rhizosphere, + 0 M NaCl, + inoculation with Variovorax soli (5)+ Klebsiella sp. ID 8 strain + Klebsiella sp. ID 27 strain

text: Chile: Angol

text: Wheat rhizosphere

text: 37.82449716 S 72.66155985 W

text: metagenome

text: 0.25 g


text: Universidad de La Frontera

text: live

text: Metagenome or environmental

text: Wheat (Triticum aestivum var. Fritz) rhizosphere, + 0.15 M NaCl, + inoculation with Variovorax soli (5)+ Klebsiella sp. ID 8 strain + Klebsiella sp. ID 27 strain

text: Chile: Angol

text: Wheat rhizosphere

text: 37.82449716 S 72.66155985 W

text: metagenome

text: 0.25 g


text: Universidad de La Frontera

text: live

text: Metagenome or environmental

text: Wheat (Triticum aestivum var. Fritz) rhizosphere, + 0.25 M NaCl, + inoculation with Variovorax soli (5)+ Klebsiella sp. ID 8 strain + Klebsiella sp. ID 27 strain

text: Chile: Angol

text: Wheat rhizosphere

text: 37.82449716 S 72.66155985 W

text: metagenome

text: 0.25 g


text: University of Michigan

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: USA

text: 42.2820 N 83.7342 W

text: metagenome

text: MIMARKS Survey related sample from metagenome


text: University of Michigan

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: USA

text: 42.2820 N 83.7342 W

text: synthetic metagenome

text: MIMARKS Survey related sample from synthetic metagenome


text: University of Michigan

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: bleomycin [CHEBI: 22907]

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: digestive system [UBERON:0001007]

text: fecal material [ENVO:00002003]

text: USA

text: Mus musculus

text: female

text: fecal pellet

text: 42.2820 N 83.7342 W

text: spf

text: mouse gut metagenome

text: experiment

text: MIMARKS Survey related sample from mouse gut metagenome


text: University of Michigan

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: saline

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: digestive system [UBERON:0001007]

text: fecal material [ENVO:00002003]

text: USA

text: Mus musculus

text: female

text: fecal pellet

text: 42.2820 N 83.7342 W

text: spf

text: mouse gut metagenome

text: experiment


text: University of Michigan

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: saline

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: digestive system [UBERON:0001007]

text: fecal material [ENVO:00002003]

text: USA

text: Mus musculus

text: male

text: fecal pellet

text: 42.2820 N 83.7342 W

text: gf

text: mouse gut metagenome

text: experiment


text: University of Michigan

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: saline

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: digestive system [UBERON:0001007]

text: fecal material [ENVO:00002003]

text: USA

text: Mus musculus

text: male

text: fecal pellet

text: 42.2820 N 83.7342 W

text: gf

text: mouse gut metagenome

text: fp

text: experiment


text: University of Michigan

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: bleomycin [CHEBI: 22907]

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: digestive system [UBERON:0001007]

text: fecal material [ENVO:00002003]

text: USA

text: Mus musculus

text: female

text: fecal pellet

text: 42.2820 N 83.7342 W

text: gf

text: mouse gut metagenome

text: experiment


text: University of Michigan

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: bleomycin [CHEBI: 22907]

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: digestive system [UBERON:0001007]

text: fecal material [ENVO:00002003]

text: USA

text: Mus musculus

text: female

text: fecal pellet

text: 42.2820 N 83.7342 W

text: gf

text: mouse gut metagenome

text: fp

text: experiment


text: University of Michigan

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: bleomycin [CHEBI: 22907]

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: digestive system [UBERON:0001007]

text: fecal material [ENVO:00002003]

text: USA

text: Mus musculus

text: male

text: fecal pellet

text: 42.2820 N 83.7342 W

text: gf

text: mouse gut metagenome

text: experiment


text: University of Michigan

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: bleomycin [CHEBI: 22907]

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: digestive system [UBERON:0001007]

text: fecal material [ENVO:00002003]

text: USA

text: Mus musculus

text: male

text: fecal pellet

text: 42.2820 N 83.7342 W

text: gf

text: mouse gut metagenome

text: fp

text: experiment


text: University of Michigan

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: bleomycin [CHEBI: 22907]

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: digestive system [UBERON:0001007]

text: fecal material [ENVO:00002003]

text: USA

text: Mus musculus

text: male

text: fecal pellet

text: 42.2820 N 83.7342 W

text: spf

text: mouse gut metagenome

text: experiment


text: University of Michigan

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: saline

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: digestive system [UBERON:0001007]

text: fecal material [ENVO:00002003]

text: USA

text: Mus musculus

text: male

text: fecal pellet

text: 42.2820 N 83.7342 W

text: fmt

text: mouse gut metagenome

text: experiment


text: University of Michigan

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: bleomycin [CHEBI: 22907]

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: digestive system [UBERON:0001007]

text: fecal material [ENVO:00002003]

text: USA

text: Mus musculus

text: male

text: fecal pellet

text: 42.2820 N 83.7342 W

text: fmt

text: mouse gut metagenome

text: experiment


text: University of Michigan

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: saline

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: digestive system [UBERON:0001007]

text: fecal material [ENVO:00002003]

text: USA

text: Mus musculus

text: female

text: fecal pellet

text: 42.2820 N 83.7342 W

text: fmt

text: mouse gut metagenome

text: experiment


text: University of Michigan

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: bleomycin [CHEBI: 22907]

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: digestive system [UBERON:0001007]

text: fecal material [ENVO:00002003]

text: USA

text: Mus musculus

text: female

text: fecal pellet

text: 42.2820 N 83.7342 W

text: fmt

text: mouse gut metagenome

text: experiment


text: University of Michigan

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: saline

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: digestive system [UBERON:0001007]

text: fecal material [ENVO:00002003]

text: USA

text: Mus musculus

text: male

text: fecal pellet

text: 42.2820 N 83.7342 W

text: spf

text: mouse gut metagenome

text: experiment


text: NJDOH PHEL-Virology's shared submissions

text: live

text: SARS-CoV-2: clinical or host-associated

text: NJDOH, Public Health and Environmental Laboratories

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032808/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22032819/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033218/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033219/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033220/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033221/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033222/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033223/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033224/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033225/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033226/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033227/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033228/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJDOH PHEL-Virology's shared submissions

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033229/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: NJDOH, Public Health and Environmental Laboratories

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033230/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033232/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033233/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033253/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033254/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033255/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033258/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033260/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033261/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033262/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033264/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033267/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJDOH PHEL-Virology's shared submissions

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033295/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: NJDOH, Public Health and Environmental Laboratories

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033297/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033299/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033301/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033305/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033306/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: University of Michigan

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: USA

text: 42.2820 N 83.7342 W

text: synthetic metagenome

text: MIMARKS Survey related sample from synthetic metagenome


text: University of Michigan

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: USA

text: 42.2820 N 83.7342 W

text: metagenome

text: MIMARKS Survey related sample from metagenome


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033303/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033390/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033549/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033550/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033552/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJDOH PHEL-Virology's shared submissions

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033555/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: NJDOH, Public Health and Environmental Laboratories

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033557/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033559/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033563/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033565/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033567/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033568/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033572/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033576/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033620/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033621/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033622/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033623/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJDOH PHEL-Virology's shared submissions

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033624/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: NJDOH, Public Health and Environmental Laboratories

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033627/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033628/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033629/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033630/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033705/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033775/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033776/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22033778/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22034191/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22034192/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22034194/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22034268/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJDOH PHEL-Virology's shared submissions

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22034240/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: NJDOH, Public Health and Environmental Laboratories

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22034243/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22034247/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22034250/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22034255/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22034256/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22034262/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22034278/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22034280/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22034282/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22034284/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22034286/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22034288/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: NJDOH PHEL-Virology's shared submissions

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22034289/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: NJDOH, Public Health and Environmental Laboratories

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22034290/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22034291/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22034292/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22034314/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22034316/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22034411/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22034413/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22034414/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22034417/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22034421/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: male

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22034425/2022

text: clinical

text: Clinical diagnostic

text: Baseline surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: New Jersey

text: Homo sapiens

text: female

text: SARS-CoV-2/Human/USA/NJ-PHEL-V22034441/2022

text: clinical

text: Clinical diagnostic

text: Targetted surveillance


text: Cardiovascular Institute, University of Pennsylvania

text: live

text: Generic

characteristic: age

text: EPCAM+

characteristic: cell type

text: SP-C C121Gneo

characteristic: genotype

text: Mus musculus

text: lung

text: SP-C C121Gneo


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: EPCAM+

text: Sp-C C121G

text: Mus musculus

text: lung

text: SP-C C121G Day 3


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: EPCAM+

text: Sp-C C121G

text: Mus musculus

text: lung

text: SP-C C121G Day 7


text: Wadsworth Center NYSDOH

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

text: New York State Department of Health

text: USA:NY

text: Homo sapiens

text: stool

text: Clostridioides difficile

text: New York State Department of Health

text: human

text: Pathogen: clinical or host-associated sample from Clostridioides difficile


text: Public Health England

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

characteristic: serovar

text: Escherichia coli serovar Escherichia coli 1674841


text: Public Health England

text: live

text: Pathogen.env

characteristic: SRA accession

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

characteristic: host

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1674876


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

characteristic: organism

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1674797

characteristic: title


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

characteristic: strain

text: Escherichia coli serovar Escherichia coli 1674849


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1674820


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1674852


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1674802


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1674791


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1674783


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1674784


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1674859


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1674867


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1674836


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1674785


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1674792


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1674824


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1674845


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1674786


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1674821


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1674794


text: CDC

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: Urine, first void

text: Proteus mirabilis

text: Microbe sample from Proteus mirabilis


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1674830


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1674810


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1674853


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1674846


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1674874


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Shigella sonnei

text: None detected

text: Shigella sonnei

text: Shigella sonnei serovar Shigella sonnei 1674819


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1674823


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Shigella flexneri

text: None detected

text: Shigella flexneri

text: Shigella flexneri serovar Shigella flexneri 1674839


text: Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1674858


text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.env

text: TN

text: USA:TN

text: Pork Chop

text: Salmonella enterica

text: Salmonella enterica


text: CDC

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: sputum

text: Klebsiella oxytoca

text: Microbe sample from Klebsiella oxytoca


text: CDC

text: live

characteristic: MLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: Right Ureter

text: Acinetobacter baumannii

text: Microbe sample from Acinetobacter baumannii


text: Southwest University

text: live

text: Metagenome or environmental

text: Homo sapiens

text: feces metagenome

characteristic: tmp


text: University of Michigan

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Keywords: GSC:MIxS;MIMARKS:5.0

characteristic: description

text: USA

text: 42.2820 N 83.7342 W

text: metagenome

text: MIMARKS Survey related sample from metagenome


characteristic: External Id

text: University of Michigan

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: USA

text: 42.2820 N 83.7342 W

text: synthetic metagenome

text: MIMARKS Survey related sample from synthetic metagenome


text: University of Michigan

characteristic: INSDC center name

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: bleomycin [CHEBI: 22907]

text: no

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: digestive system [UBERON:0001007]

text: fecal material [ENVO:00002003]

text: USA

text: Mus musculus

text: female

text: jax

text: fecal pellet

text: 42.2820 N 83.7342 W

text: mouse gut metagenome

text: experiment

text: MIMARKS Survey related sample from mouse gut metagenome


text: University of Michigan

characteristic: INSDC first public

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: bleomycin [CHEBI: 22907]

text: no

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: digestive system [UBERON:0001007]

text: fecal material [ENVO:00002003]

text: USA

text: Mus musculus

text: female

text: cr

text: fecal pellet

text: 42.2820 N 83.7342 W

text: mouse gut metagenome

text: experiment


text: University of Michigan

characteristic: INSDC last update

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: bleomycin [CHEBI: 22907]

text: random

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: digestive system [UBERON:0001007]

text: fecal material [ENVO:00002003]

text: USA

text: Mus musculus

text: female

text: jax

text: fecal pellet

text: 42.2820 N 83.7342 W

text: mouse gut metagenome

text: experiment


text: University of Michigan

characteristic: INSDC secondary accession

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: bleomycin [CHEBI: 22907]

text: random

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: digestive system [UBERON:0001007]

text: fecal material [ENVO:00002003]

text: USA

text: Mus musculus

text: female

text: cr

text: fecal pellet

text: 42.2820 N 83.7342 W

text: mouse gut metagenome

text: experiment


text: CDC

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: stool

text: Klebsiella oxytoca

text: Microbe sample from Klebsiella oxytoca


text: CDC

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: USA

text: Homo sapiens

text: wound

text: Klebsiella aerogenes

text: Microbe sample from Klebsiella aerogenes


text: Seattle Flu Study submission group

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: Seattle Flu Study

text: USA: Washington, Snohomish County

text: Homo sapiens

characteristic: isolate

text: clinical

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: CDC

text: live

text: MLST764_Pasteur, MLST1780_Oxford

text: Microbe, viral or environmental

characteristic: SRA accession

text: USA

text: Homo sapiens

text: sputum

text: Acinetobacter baumannii


text: CDC

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

characteristic: host

text: urine

text: Klebsiella pneumoniae

text: Microbe sample from Klebsiella pneumoniae


text: Utah Public Health Laboratory Infectious Disease submission group

text: live

text: SARS-CoV-2: wastewater surveillance

text: USA: Utah

text: wastewater

text: wastewater metagenome

characteristic: organism

text: public health surveillance community-level

text: characterize diversity of lineages and mutations across entire genome

text: UPHL

text: SARS-CoV-2: wastewater surveillance sample from wastewater metagenome

text: no

text: Promega wastewater large volume TNA capture kit,Promega automated TNA kit

text: raw wastewater

text: wastewater treatment plant

text: composite

text: UT

text: copies/L wastewater

text: N1 & N2 combined

text: no

text: IDT Research Use Only Kit (https://www.idtdna.com/pages/landing/coronavirus-research-reagents/cdc-assays)


text: live

text: SARS-CoV-2: wastewater surveillance

text: USA: Utah

text: wastewater

text: wastewater metagenome

text: UPHL

characteristic: title

text: no

text: raw wastewater

text: wastewater treatment plant

text: composite

text: UT

text: N1 & N2 combined

text: no


text: live

text: SARS-CoV-2: wastewater surveillance

text: USA: Utah

text: wastewater

text: wastewater metagenome

text: UPHL

text: no

text: raw wastewater

text: wastewater treatment plant

text: grab

text: UT

text: copies/L wastewater

text: N1 & N2 combined

text: no


text: CDC

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: Urine, Clean catch

text: Klebsiella oxytoca

characteristic: strain

text: Microbe sample from Klebsiella oxytoca


text: CDC

text: live

characteristic: MLST

text: Microbe, viral or environmental

text: MiSeq paired reads

characteristic: filename

text: fastq

characteristic: filetype

text: USA

text: Homo sapiens

text: Illumina MiSeq

text: blood

text: paired

text: RANDOM

text: GENOMIC

text: WGS

text: Escherichia coli

text: ILLUMINA

characteristic: platform

text: MiSeq 2021GO-0235

text: Microbe sample from Escherichia coli


characteristic: External Id

text: CDC

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: MiSeq paired reads

text: fastq

text: USA

text: Homo sapiens

text: Illumina MiSeq

text: Urine Culture

text: paired

text: RANDOM

text: GENOMIC

text: WGS

text: Enterobacter cloacae

text: ILLUMINA

text: Microbe sample from Enterobacter cloacae

text: MiSeq 2021GO-0236


text: CDC

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: MiSeq paired reads

text: fastq

text: USA

text: Homo sapiens

text: Illumina MiSeq

text: Urine Culture

text: paired

text: RANDOM

text: GENOMIC

text: WGS

text: Providencia rettgeri

text: ILLUMINA

text: Microbe sample from Providencia rettgeri

text: MiSeq 2021GO-0237


text: CDC

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: MiSeq paired reads

text: fastq

text: USA

text: Homo sapiens

text: Illumina MiSeq

text: bronchoalveolar lavage

text: paired

text: RANDOM

text: GENOMIC

text: WGS

text: Enterobacter cloacae

text: ILLUMINA

text: MiSeq 2021GO-0238


text: CDC

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: MiSeq paired reads

text: fastq

text: USA

text: Homo sapiens

text: Illumina MiSeq

text: blood

text: paired

text: RANDOM

text: GENOMIC

text: WGS

text: Enterobacter cloacae

text: ILLUMINA

text: MiSeq 2021GO-0239


text: CDC

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: MiSeq paired reads

text: fastq

text: USA

text: Homo sapiens

text: Illumina MiSeq

text: Abscess, Abdominal

text: paired

text: RANDOM

text: GENOMIC

text: WGS

text: Klebsiella pneumoniae

text: ILLUMINA

text: MiSeq 2021GO-0240


text: CDC

text: live

text: Microbe, viral or environmental

text: MiSeq paired reads

text: fastq

text: USA

text: Homo sapiens

characteristic: host

text: Illumina MiSeq

text: Abscess, Abdominal

text: paired

text: RANDOM

text: GENOMIC

text: WGS

text: Klebsiella pneumoniae

text: ILLUMINA

text: MiSeq 2021GO-0241


text: CDC

text: live

text: Microbe, viral or environmental

text: MiSeq paired reads

text: fastq

text: USA

text: Homo sapiens

text: Illumina MiSeq

text: Urine, Clean Catch

text: paired

text: RANDOM

text: GENOMIC

text: WGS

text: Klebsiella pneumoniae

characteristic: organism

text: ILLUMINA

text: MiSeq 2021GO-0242


text: CDC

text: live

text: Microbe, viral or environmental

text: MiSeq paired reads

text: fastq

text: USA

text: Homo sapiens

text: Illumina MiSeq

text: Tissue

text: paired

text: RANDOM

text: GENOMIC

text: WGS

text: Klebsiella aerogenes

text: ILLUMINA

text: MiSeq 2021GO-0243

characteristic: title


text: CDC

text: live

text: Microbe, viral or environmental

text: MiSeq paired reads

text: fastq

text: USA

text: Homo sapiens

text: Illumina MiSeq

text: blood

text: paired

text: RANDOM

text: GENOMIC

text: WGS

text: Klebsiella pneumoniae

text: ILLUMINA

characteristic: strain

text: MiSeq 2021GO-0244


text: University of California, Berkeley

text: live

text: Metagenome or environmental

text: USA: Contra Costa County, California

text: Otospermophilus beecheyi

text: animal gut

text: 37.9570 N 122.1237 W

text: gut metagenome

text: Metagenome or environmental sample from gut metagenome

text: Sterile Tub


text: University of California, Berkeley

text: live

text: Metagenome or environmental

text: USA: Contra Costa County, California

text: Otospermophilus beecheyi

text: animal gut

text: 37.9570 N 122.1237 W

text: gut metagenome

text: Soil - LN2


text: University of California, Berkeley

text: live

text: Metagenome or environmental

text: USA: Contra Costa County, California

text: Otospermophilus beecheyi

text: animal gut

text: 37.9570 N 122.1237 W

text: gut metagenome

text: Soil - No LN2


text: The Jackson Laboratory

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:5.0

characteristic: description

text: human saliva

text: bacteria in saliva

text: saliva

text: USA: Hartford, CT

text: Homo sapiens

text: human oral metagenome

text: MIMS Environmental/Metagenome sample from human oral metagenome

text: Aging_16S_saliva_rep2_14_194J_100_080222


text: The Jackson Laboratory

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:5.0

text: human saliva

text: bacteria in saliva

text: saliva

text: USA: Hartford, CT

text: Homo sapiens

text: human oral metagenome

text: Aging_16S_saliva_rep2_14_194J_101_080222


text: The Jackson Laboratory

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:5.0

text: human saliva

text: bacteria in saliva

text: saliva

text: USA: Hartford, CT

text: Homo sapiens

text: human oral metagenome

text: Aging_16S_saliva_rep2_14_194J_102_080222


text: The Jackson Laboratory

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:5.0

text: human saliva

text: bacteria in saliva

text: saliva

text: USA: Hartford, CT

text: Homo sapiens

text: human oral metagenome

text: Aging_16S_saliva_rep2_14_194J_103_080222


text: The Jackson Laboratory

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:5.0

text: human saliva

text: bacteria in saliva

text: saliva

text: USA: Hartford, CT

text: Homo sapiens

text: human oral metagenome

text: Aging_16S_saliva_rep2_14_194J_104_080222


text: The Jackson Laboratory

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:5.0

text: human saliva

text: bacteria in saliva

text: saliva

text: USA: Hartford, CT

text: Homo sapiens

text: human oral metagenome

text: Aging_16S_saliva_rep2_14_194J_105_080222


text: The Jackson Laboratory

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:5.0

text: human saliva

text: bacteria in saliva

text: saliva

text: USA: Hartford, CT

text: Homo sapiens

text: human oral metagenome

text: Aging_16S_saliva_rep2_14_194J_106_080222


text: The Jackson Laboratory

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:5.0

text: human saliva

text: bacteria in saliva

text: saliva

text: USA: Hartford, CT

text: Homo sapiens

text: human oral metagenome

text: Aging_16S_saliva_rep2_14_194J_107_080222


text: The Jackson Laboratory

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:5.0

text: human saliva

text: bacteria in saliva

text: saliva

text: USA: Hartford, CT

text: Homo sapiens

text: human oral metagenome

text: Aging_16S_saliva_rep2_14_194J_108_080222


text: The Jackson Laboratory

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:5.0

text: human saliva

text: bacteria in saliva

text: saliva

text: USA: Hartford, CT

text: Homo sapiens

text: human oral metagenome

text: Aging_16S_saliva_rep2_14_194J_109_080222


text: The Jackson Laboratory

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:5.0

text: human saliva

text: bacteria in saliva

text: saliva

text: USA: Hartford, CT

text: Homo sapiens

text: human oral metagenome

text: Aging_16S_saliva_rep2_14_194J_200_080222