status: PUBLIC

text: Hordeum vulgare

characteristic: Organism

text: Resequencing of barley genomic DNA (CDB0083) - A two-rowed barley accession (CDB0083) carrying vrs1.a4

characteristic: description

text: Hordeum vulgare

characteristic: scientific name

text: leaf

BIT

Address: Corrensstrasse 3, 06466 Seeland OT Gatersleben, Germany

Anne Fiebig

FirstName: Anne

LastName: Fiebig


characteristic: External Id

text: CeNT, Uniwersytet Warszawski

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: untreated

tag: attribute

characteristic: agent

text: monoculture

characteristic: culture

text: COPD

characteristic: disease

text: Homo sapiens

characteristic: organism

text: primary nasal epithalial cells

characteristic: title


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: untreated

text: triple co-culture

text: asthma

text: Homo sapiens

text: primary nasal epithalial cells

text: epithelium co-cultivated with macrophages and dendritic cells_36_15


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: Urban Particulate Matter treated

text: triple co-culture

text: asthma

text: Homo sapiens

text: primary nasal epithalial cells

text: epithelium co-cultivated with macrophages and dendritic cells+UPM_36_16


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: Urban Particulate Matter treated

text: monoculture

text: asthma

text: Homo sapiens

text: primary nasal epithalial cells


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: untreated

text: monoculture

text: asthma

text: Homo sapiens

text: primary nasal epithalial cells


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: Urban Particulate Matter treated

text: monoculture

text: control

text: Homo sapiens

text: primary nasal epithalial cells


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: untreated

text: monoculture

text: control

text: Homo sapiens

text: primary nasal epithalial cells


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: Urban Particulate Matter treated

text: triple co-culture

text: COPD

text: Homo sapiens

text: primary nasal epithalial cells

text: epithelium co-cultivated with macrophages and dendritic cells+UPM_45_16


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: untreated

text: triple co-culture

text: COPD

text: Homo sapiens

text: primary nasal epithalial cells

text: epithelium co-cultivated with macrophages and dendritic cells_45_15


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: Urban Particulate Matter treated

text: monoculture

text: COPD

text: Homo sapiens

text: primary nasal epithalial cells


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: Urban Particulate Matter treated

text: triple co-culture

text: asthma

text: Homo sapiens

text: primary nasal epithalial cells

text: epithelium co-cultivated with macrophages and dendritic cells+UPM_40_16


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: untreated

text: triple co-culture

text: asthma

text: Homo sapiens

text: primary nasal epithalial cells

text: epithelium co-cultivated with macrophages and dendritic cells_40_15


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: Urban Particulate Matter treated

text: triple co-culture

text: COPD

text: Homo sapiens

text: primary nasal epithalial cells

text: epithelium co-cultivated with macrophages and dendritic cells+UPM_38_16


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: untreated

text: triple co-culture

text: COPD

text: Homo sapiens

text: primary nasal epithalial cells

text: epithelium co-cultivated with macrophages and dendritic cells_38_15


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: untreated

text: triple co-culture

text: COPD

text: Homo sapiens

text: primary nasal epithalial cells

text: epithelium co-cultivated with macrophages and dendritic cells_60_15


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: Urban Particulate Matter treated

text: triple co-culture

text: asthma

text: Homo sapiens

text: primary nasal epithalial cells

text: epithelium co-cultivated with macrophages and dendritic cells+UPM_58_16


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: untreated

text: triple co-culture

text: asthma

text: Homo sapiens

text: primary nasal epithalial cells

text: epithelium co-cultivated with macrophages and dendritic cells_58_15


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: Urban Particulate Matter treated

text: triple co-culture

text: control

text: Homo sapiens

text: primary nasal epithalial cells

text: epithelium co-cultivated with macrophages and dendritic cells+UPM_48_16


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: Urban Particulate Matter treated

text: triple co-culture

text: asthma

text: Homo sapiens

text: primary nasal epithalial cells

text: epithelium co-cultivated with macrophages and dendritic cells+UPM_52_16


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: untreated

text: triple co-culture

text: asthma

text: Homo sapiens

text: primary nasal epithalial cells

text: epithelium co-cultivated with macrophages and dendritic cells_52_15


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: Urban Particulate Matter treated

text: monoculture

text: asthma

text: Homo sapiens

text: primary nasal epithalial cells


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: untreated

text: triple co-culture

text: control

text: Homo sapiens

text: primary nasal epithalial cells

text: epithelium co-cultivated with macrophages and dendritic cells_48_15


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: Urban Particulate Matter treated

text: triple co-culture

text: control

text: Homo sapiens

text: primary nasal epithalial cells

text: epithelium co-cultivated with macrophages and dendritic cells+UPM_68_16


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: Urban Particulate Matter treated

text: triple co-culture

text: COPD

text: Homo sapiens

text: primary nasal epithalial cells

text: epithelium co-cultivated with macrophages and dendritic cells+UPM_63_16


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: untreated

text: monoculture

text: control

text: Homo sapiens

text: primary nasal epithalial cells


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: untreated

text: triple co-culture

text: control

text: Homo sapiens

text: primary nasal epithalial cells

text: epithelium co-cultivated with macrophages and dendritic cells_68_15


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: Urban Particulate Matter treated

text: monoculture

text: control

text: Homo sapiens

text: primary nasal epithalial cells


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: Urban Particulate Matter treated

text: triple co-culture

text: control

text: Homo sapiens

text: primary nasal epithalial cells

text: epithelium co-cultivated with macrophages and dendritic cells+UPM_65_16


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: untreated

text: triple co-culture

text: control

text: Homo sapiens

text: primary nasal epithalial cells

text: epithelium co-cultivated with macrophages and dendritic cells_65_15


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: untreated

text: triple co-culture

text: COPD

text: Homo sapiens

text: primary nasal epithalial cells

text: epithelium co-cultivated with macrophages and dendritic cells_63_15


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: Urban Particulate Matter treated

text: monoculture

text: COPD

text: Homo sapiens

text: primary nasal epithalial cells


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: untreated

text: monoculture

text: COPD

text: Homo sapiens

text: primary nasal epithalial cells


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: Urban Particulate Matter treated

text: triple co-culture

text: COPD

text: Homo sapiens

text: primary nasal epithalial cells

text: epithelium co-cultivated with macrophages and dendritic cells+UPM_60_16


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: Urban Particulate Matter treated

text: triple co-culture

text: control

text: Homo sapiens

text: primary nasal epithalial cells

text: epithelium co-cultivated with macrophages and dendritic cells+UPM_72_16


text: CeNT, Uniwersytet Warszawski

text: live

text: Generic

text: untreated

text: triple co-culture

text: control

text: Homo sapiens

text: primary nasal epithalial cells

text: epithelium co-cultivated with macrophages and dendritic cells_72_15


Podocnemis unifilis metagenome

text: Ulm Universtiy

text: live

text: Metagenome or environmental

text: Establishment and development of gut microbiomes during vertebrates early life are likely to be important predictors of health and fitness. Host-environment interactions are essential to these processes. In oviparous reptiles, the relative role of host-selection and stochastic environmental factors during gut microbiome assemblage remains unknown. We sampled eggs incubated in artificial nests and hatchlings of the yellow-spotted Amazon river turtle developing in tubs filled with river water. We examined the relative role of the internal egg microbiome and the abiotic environment on hatchling gut microbiome assemblages during the first 30 days of development. Nest environment strongly influenced the internal egg microbiome which in turn predicted gut microbiomes of hatchlings. During hatchling development the stochastic processes driven by the river environment plays a key role in the establishment of the gut microbiome and strongly influences shifts in microbial diversity and abundance. After one month shifts in gut microbiome composition were mainly driven by host-selection processes. Therefore environmental stochastic processes are key in the initial stages of gut microbiome establishment which is subsequently shaped by host-selection processes.

text: Ecuador

text: Podocnemis unifilis

characteristic: host

text: egg, cloaca, nest and river

text: 0.3818 S 76.90 W

text: gut metagenome

text: Swab

text: Yellow-spotted Amazon river turtle metagenome sample from egg and cloaca, and nest and river environment


Fungi Fusarium

text: Ulm Universtiy

text: live

text: Microbe, viral or environmental

text: Ecuador

text: Podocnemis unifilis

text: Freshwater turtle

characteristic: isolate

text: egg

text: 0.3818 S 76.90 W

text: Fusarium solani species complex

text: swab sample

text: Microbe sample from Fusarium solani species complex


G1 plastic 1 replicate

text: Universidad de Alcala

text: live

text: MIGS/MIMS/MIMARKS.microbial

text: MIMARKS.survey

text: 0 meters

characteristic: depth

text: Keywords: GSC:MIxS;MIMARKS:5.0

characteristic: description

text: 50 meters

characteristic: elev

text: Cyprus: Larnaca

text: 34.74525 N 33.36067 E

text: biofilm metagenome

characteristic: replicate

text: MIMARKS Survey related sample from biofilm metagenome


G1 plastic 2 replicate

characteristic: External Id

text: Universidad de Alcala

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIGS/MIMS/MIMARKS.microbial

text: MIMARKS.survey

text: 0 meters

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: 50 meters

text: Cyprus: Larnaca

text: 34.74525 N 33.36067 E

text: biofilm metagenome


G1 plastic 3 replicate

text: Universidad de Alcala

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.microbial

characteristic: NCBI submission model

text: MIMARKS.survey

characteristic: NCBI submission package

text: 0 meters

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: 50 meters

text: Cyprus: Larnaca

text: 34.74525 N 33.36067 E

text: biofilm metagenome


CG2 plastic 1 replicate

text: Universidad de Alcala

text: live

text: MIGS/MIMS/MIMARKS.microbial

text: MIMARKS.survey

characteristic: SRA accession

text: 0 meters

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: 50 meters

text: Cyprus: Larnaca

text: 34.74514 N 33.36086 E

text: biofilm metagenome


CG2 plastic 2 replicate

text: Universidad de Alcala

text: live

text: MIGS/MIMS/MIMARKS.microbial

text: MIMARKS.survey

text: 0 meters

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: 50 meters

text: Cyprus: Larnaca

text: 34.74514 N 33.36086 E

text: biofilm metagenome

characteristic: organism


CG2 plastic 3 replicate

text: Universidad de Alcala

text: live

text: MIGS/MIMS/MIMARKS.microbial

text: MIMARKS.survey

text: 0 meters

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: 50 meters

text: Cyprus: Larnaca

text: 34.74514 N 33.36086 E

text: biofilm metagenome

characteristic: title


R3 plastic 1 replicate

text: Universidad de Alcala

text: live

text: MIGS/MIMS/MIMARKS.microbial

text: MIMARKS.survey

text: 0 meters

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: 20 meters

text: Cyprus: Larnaca

text: 34.73289 N 33.36633 E

text: biofilm metagenome


R3 plastic 2 replicate

text: Universidad de Alcala

text: live

text: MIGS/MIMS/MIMARKS.microbial

text: MIMARKS.survey

text: 0 meters

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: 20 meters

text: Cyprus: Larnaca

text: 34.73289 N 33.36633 E

text: biofilm metagenome


R3 plastic 3 replicate

text: Universidad de Alcala

text: live

text: MIGS/MIMS/MIMARKS.microbial

text: MIMARKS.survey

text: 0 meters

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: 20 meters

text: Cyprus: Larnaca

text: 34.73289 N 33.36633 E

text: biofilm metagenome


R4 plastic 1 replicate

text: Universidad de Alcala

text: live

text: MIGS/MIMS/MIMARKS.microbial

text: MIMARKS.survey

text: 1 meters

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: 3 meters

text: Cyprus: Larnaca

text: 34.71339 N 33.16453 E

text: biofilm metagenome


R4 plastic 2 replicate

text: Universidad de Alcala

text: live

text: MIGS/MIMS/MIMARKS.microbial

text: MIMARKS.survey

text: 1 meters

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: 3 meters

text: Cyprus: Larnaca

text: 34.71339 N 33.16453 E

text: biofilm metagenome


R4 plastic 3 replicate

text: Universidad de Alcala

text: live

text: MIGS/MIMS/MIMARKS.microbial

text: MIMARKS.survey

text: 1 meters

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: 3 meters

text: Cyprus: Larnaca

text: 34.71339 N 33.16453 E

text: biofilm metagenome


S5 plastic 1 replicate

text: Universidad de Alcala

text: live

text: MIGS/MIMS/MIMARKS.microbial

text: MIMARKS.survey

text: 2 meters

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: 0 meters

text: Cyprus: Larnaca

text: 34.71222 N 33.16439 E

text: biofilm metagenome


S5 plastic 2 replicate

text: Universidad de Alcala

text: live

text: MIGS/MIMS/MIMARKS.microbial

text: MIMARKS.survey

text: 2 meters

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: 0 meters

text: Cyprus: Larnaca

text: 34.71222 N 33.16439 E

text: biofilm metagenome


S5 plastic 3 replicate

text: Universidad de Alcala

text: live

text: MIGS/MIMS/MIMARKS.microbial

text: MIMARKS.survey

text: 2 meters

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: 0 meters

text: Cyprus: Larnaca

text: 34.71222 N 33.16439 E

text: biofilm metagenome


Soil 1 replicate

text: Universidad de Alcala

text: live

text: MIGS/MIMS/MIMARKS.microbial

text: MIMARKS.survey

text: 1 meters

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: 50 meters

text: Cyprus: Larnaca

text: 34.74525 N 33.36067 E

text: soil metagenome

text: MIMARKS Survey related sample from soil metagenome


Soil 2 replicate

text: Universidad de Alcala

text: live

text: MIGS/MIMS/MIMARKS.microbial

text: MIMARKS.survey

text: 1 meters

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: 50 meters

text: Cyprus: Larnaca

text: 34.74514 N 33.36086 E

text: soil metagenome


Soil 3 replicate

text: Universidad de Alcala

text: live

text: MIGS/MIMS/MIMARKS.microbial

text: MIMARKS.survey

text: 1 meters

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: 20 meters

text: Cyprus: Larnaca

text: 34.73289 N 33.36633 E

text: soil metagenome


Freshwater 1 replicate

text: Universidad de Alcala

text: live

text: MIGS/MIMS/MIMARKS.microbial

text: MIMARKS.survey

text: 1 meters

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: 3 meters

text: Cyprus: Larnaca

text: 34.71339 N 33.16453 E

text: freshwater metagenome

text: MIMARKS Survey related sample from freshwater metagenome


Freshwater 2 replicate

text: Universidad de Alcala

text: live

text: MIGS/MIMS/MIMARKS.microbial

text: MIMARKS.survey

text: 1 meters

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: 3 meters

text: Cyprus: Larnaca

text: 34.71339 N 33.16453 E

text: freshwater metagenome


Freshwater 3 replicate

text: Universidad de Alcala

text: live

text: MIGS/MIMS/MIMARKS.microbial

text: MIMARKS.survey

text: 1 meters

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: 3 meters

text: Cyprus: Larnaca

text: 34.71339 N 33.16453 E

text: freshwater metagenome


Sea Water 1 replicate

text: Universidad de Alcala

text: live

text: MIGS/MIMS/MIMARKS.microbial

text: MIMARKS.survey

text: 2 meters

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: 0 meters

text: Cyprus: Larnaca

text: 34.71222 N 33.16439 E

text: seawater metagenome

text: MIMARKS Survey related sample from seawater metagenome


Sea Water 2 replicate

text: Universidad de Alcala

text: live

text: MIGS/MIMS/MIMARKS.microbial

text: MIMARKS.survey

text: 2 meters

text: Keywords: GSC:MIxS;MIMARKS:5.0

text: 0 meters

text: Cyprus: Larnaca

text: 34.71222 N 33.16439 E

text: seawater metagenome


text: University of Massachusetts Medical School

text: live

text: Generic

text: endogenous CTCF KO, CTCF-AID, TIR1

characteristic: genotype

text: Homo sapiens

text: HAP1 cells

characteristic: treatment


text: live

text: Generic

text: endogenous CTCF KO, CTCF-AID, TIR1

text: Homo sapiens

text: HAP1 cells

text: non-treated


text: live

text: Generic

text: endogenous CTCF KO, CTCF-AID

text: Homo sapiens

text: HAP1 cells


text: live

text: Generic

text: endogenous CTCF KO, CTCF-AID

text: Homo sapiens

text: HAP1 cells

text: non-treated


text: live

text: Generic

text: TAF5L (Proteintech, #19274-1-AP)

characteristic: chip antibody

text: endogenous CTCF KO, CTCF-AID, TIR1

text: Homo sapiens

text: HAP1 cells

text: auxin


text: live

text: Generic

text: TAF5L (Proteintech, #19274-1-AP)

text: endogenous CTCF KO, CTCF-AID, TIR1

text: Homo sapiens

text: HAP1 cells

text: non-treated


text: live

text: Generic

text: DDX55 (Bethyl Laboratories, #A303-027A)

text: endogenous CTCF KO, CTCF-AID, TIR1

text: Homo sapiens

text: HAP1 cells

text: auxin


text: live

text: Generic

text: DDX55 (Bethyl Laboratories, #A303-027A)

text: endogenous CTCF KO, CTCF-AID, TIR1

text: Homo sapiens

text: HAP1 cells

text: non-treated


text: live

text: Generic

text: RAD21 (Abcam, #ab992)

text: endogenous CTCF KO, CTCF-AID, TIR1

text: Homo sapiens

text: HAP1 cells

text: non-treated


text: live

text: Generic

text: CTCF (Cell signaling Technology, #2899)

text: endogenous CTCF KO, CTCF-AID, TIR1

text: Homo sapiens

text: HAP1 cells

text: auxin


text: live

text: Generic

text: CTCF (Cell signaling Technology, #2899)

text: endogenous CTCF KO, CTCF-AID, TIR1

text: Homo sapiens

text: HAP1 cells

text: non-treated


text: live

text: Generic

text: RAD21 (Abcam, #ab992)

text: endogenous CTCF KO, CTCF-AID, TIR1

text: Homo sapiens

text: HAP1 cells

text: auxin


text: live

text: Generic

text: input

text: endogenous CTCF KO, CTCF-AID, TIR1

text: Homo sapiens

text: HAP1 cells

text: auxin


text: live

text: Generic

text: input

text: endogenous CTCF KO, CTCF-AID, TIR1

text: Homo sapiens

text: HAP1 cells

text: non-treated


text: live

text: Generic

text: endogenous CTCF KO, CTCF-AID, TIR1, TAF5L KO

text: Homo sapiens

text: HAP1 cells

text: auxin


text: live

text: Generic

text: Homo sapiens

text: HAP1 cells

text: non-treated


text: live

text: Generic

text: endogenous CTCF KO, CTCF-AID, TIR1, DDX55 heterozygous KO

text: Homo sapiens

text: HAP1 cells

text: auxin


text: live

text: Generic

text: Homo sapiens

text: HAP1 cells

text: non-treated


text: live

text: Generic

text: endogenous CTCF KO, CTCF-AID, TIR1

text: Homo sapiens

text: HAP1 cells

text: auxin


text: live

text: Generic

text: endogenous CTCF KO, CTCF-AID, TIR1

text: Homo sapiens

text: HAP1 cells

text: non-treated


text: live

text: Generic

text: endogenous CTCF KO, CTCF-AID

text: Homo sapiens

text: HAP1 cells

text: auxin


text: live

text: Generic

text: endogenous CTCF KO, CTCF-AID

text: Homo sapiens

text: HAP1 cells

text: non-treated


text: live

text: Generic

text: endogenous CTCF KO, CTCF-AID, TIR1, AAVS1 locus mutation

text: Homo sapiens

text: HAP1 cells

text: auxin


text: live

text: Generic

text: Homo sapiens

text: HAP1 cells

text: non-treated


text: live

text: Generic

characteristic: cell line

text: DpnII

characteristic: enzyme

text: endogenous CTCF KO, CTCF-AID

text: Homo sapiens

text: HAP1 cells

text: non-treated


text: live

text: Generic

text: DpnII

text: endogenous CTCF KO, CTCF-AID

text: Homo sapiens

text: HAP1 cells

text: auxin


text: live

text: Generic

text: DpnII

text: endogenous CTCF KO, CTCF-AID, TIR1

text: Homo sapiens

text: HAP1 cells

text: non-treated


text: live

text: Generic

text: DpnII

text: endogenous CTCF KO, CTCF-AID, TIR1

text: Homo sapiens

text: HAP1 cells

text: auxin


text: live

text: Generic

text: DpnII

text: wild-type HAP1

text: Homo sapiens

text: HAP1 cells

text: auxin


text: live

text: Generic

text: DpnII

text: RPB1-AID, TIR1

text: Homo sapiens

text: HAP1 cells

text: non-treated


text: live

text: Generic

text: DpnII

text: RPB1-AID, TIR1

text: Homo sapiens

text: HAP1 cells

text: auxin


text: live

text: Generic

text: DpnII

text: endogenous CTCF KO, CTCF-AID, TIR1

text: Homo sapiens

text: HAP1 cells

text: non-treated, siCTRL


text: live

text: Generic

text: DpnII

text: endogenous CTCF KO, CTCF-AID, TIR1

text: Homo sapiens

text: HAP1 cells

text: auxin, siCTRL


text: live

text: Generic

text: DpnII

text: endogenous CTCF KO, CTCF-AID, TIR1

text: Homo sapiens

text: HAP1 cells

text: non-treated, siDDX55


text: live

text: Generic

text: DpnII

text: endogenous CTCF KO, CTCF-AID, TIR1

text: Homo sapiens

text: HAP1 cells

text: auxin, siDDX55


text: live

text: Generic

text: DpnII

text: endogenous CTCF KO, CTCF-AID, TIR1

text: Homo sapiens

text: HAP1 cells

text: auxin, siTAF5L


text: live

text: Generic

text: DpnII

text: Homo sapiens

text: HAP1 cells

text: non-treated


text: live

text: Generic

text: DpnII

text: Homo sapiens

text: HAP1 cells

text: auxin


text: live

text: Generic

text: DpnII

text: Homo sapiens

text: HAP1 cells

text: non-treated


text: live

text: Generic

text: DpnII

text: endogenous CTCF KO, CTCF-AID, TIR1

text: Homo sapiens

text: HAP1 cells

text: non-treated, siTAF5L


text: live

text: Generic

text: DpnII

text: Homo sapiens

text: HAP1 cells

text: auxin


text: live

text: Generic

text: DpnII

text: Homo sapiens

text: HAP1 cells

text: non-treated


text: live

text: Generic

text: DpnII

text: Homo sapiens

text: HAP1 cells

text: auxin


text: live

text: Generic

text: DpnII

text: wild-type HAP1

text: Homo sapiens

text: HAP1 cells

text: non-treated


text: RNA mediated Gene Regulation, RNA Biology Laboratory, National Cancer Institute

text: live

text: Generic

characteristic: cell line background

characteristic: genotype/replicate

text: IP RNA

characteristic: molecule type

text: Homo sapiens


characteristic: External Id

text: University of Texas Southwestern Medical Center

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: wild-type

text: Mus musculus

text: activated muscle stem cells

text: Activated muscle stem cells, purified from injured mouse tibialis anterior muscle

characteristic: tissue

text: activated muscle stem cells, wild-type, rep 1


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: wild-type

text: Mus musculus

text: activated muscle stem cells

text: activated muscle stem cells, wild-type, rep 2


text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: wild-type

text: Mus musculus

characteristic: organism

text: activated muscle stem cells

text: activated muscle stem cells, wild-type, rep 3

characteristic: title


text: live

text: Generic

text: wild-type

characteristic: genotype

text: Mus musculus

text: activated muscle stem cells

text: activated muscle stem cells, wild-type, rep 4


text: live

text: Generic

text: Mus musculus

text: activated muscle stem cells

text: activated muscle stem cells, mfn2-/-, rep 1


text: live

text: Generic

text: Mus musculus

text: activated muscle stem cells

text: activated muscle stem cells, mfn2-/-, rep 2


text: live

text: Generic

text: Mus musculus

text: activated muscle stem cells

text: activated muscle stem cells, mfn2-/-, rep 3


text: live

text: Generic

text: Mus musculus

text: activated muscle stem cells

text: activated muscle stem cells, mfn2-/-, rep 4


text: live

text: Generic

characteristic: cell line

characteristic: genotype/variation

text: Homo sapiens


text: University of British Columbia Okanagan

text: live

text: Model organism or animal

text: not collected

characteristic: age

text: GT-seq demultiplexed raw reads

characteristic: description

text: mature adult

text: stream-spawning kokanee

characteristic: ecotype

text: Canada: Skaha Lake, British Columbia

characteristic: isolate

text: Oncorhynchus nerka

text: male

characteristic: sex

text: Operculum

text: Model organism or animal sample from Oncorhynchus nerka


characteristic: External Id

text: University of British Columbia Okanagan

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Model organism or animal

text: not collected

text: GT-seq demultiplexed raw reads

text: mature adult

text: stream-spawning kokanee

text: Canada: Skaha Lake, British Columbia

text: Oncorhynchus nerka

text: female

text: Operculum

characteristic: tissue


text: University of British Columbia Okanagan

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

text: not collected

text: GT-seq demultiplexed raw reads

text: mature adult

text: Canada: Skaha Lake, British Columbia

text: Oncorhynchus nerka

text: female

text: Operculum


text: University of British Columbia Okanagan

text: live

text: Model organism or animal

characteristic: NCBI submission package

characteristic: SRA accession

text: not collected

text: GT-seq demultiplexed raw reads

text: mature adult

text: Canada: Skaha Lake, British Columbia

text: Oncorhynchus nerka

characteristic: organism

text: male

text: Operculum

characteristic: title


text: University of British Columbia Okanagan

text: live

text: Model organism or animal

text: not collected

characteristic: age

text: GT-seq demultiplexed raw reads

text: mature adult

text: backcross-Kokanee

text: Canada: Skaha Lake, British Columbia

text: Oncorhynchus nerka

text: male

text: Operculum


text: University of British Columbia Okanagan

text: live

text: Model organism or animal

text: not collected

text: GT-seq demultiplexed raw reads

characteristic: description

text: mature adult

text: F1 hybrid

text: Canada: Skaha Lake, British Columbia

text: Oncorhynchus nerka

text: male

text: Operculum


text: University of British Columbia Okanagan

text: live

text: Model organism or animal

text: not collected

text: GT-seq demultiplexed raw reads

text: mature adult

text: sockeye

characteristic: ecotype

text: Canada: Skaha Lake, British Columbia

text: Oncorhynchus nerka

text: female

text: Operculum


text: University of British Columbia Okanagan

text: live

text: Model organism or animal

text: not collected

text: GT-seq demultiplexed raw reads

text: mature adult

text: backcross-sockeye

text: Canada: Skaha Lake, British Columbia

characteristic: isolate

text: Oncorhynchus nerka

text: female

text: Operculum


text: University of British Columbia Okanagan

text: live

text: Model organism or animal

text: not collected

text: GT-seq demultiplexed raw reads

text: mature adult

text: backcross-sockeye

text: Canada: Skaha Lake, British Columbia

text: Oncorhynchus nerka

text: male

characteristic: sex

text: Operculum


characteristic: External Id

text: University of British Columbia Okanagan

text: live

text: Model organism or animal

text: not collected

text: GT-seq demultiplexed raw reads

text: mature adult

text: backcross-Kokanee

text: Canada: Skaha Lake, British Columbia

text: Oncorhynchus nerka

text: female

text: Operculum


text: University of British Columbia Okanagan

characteristic: INSDC center name

text: live

text: Model organism or animal

text: not collected

text: GT-seq demultiplexed raw reads

text: mature adult

text: F2 hybrid

text: Canada: Skaha Lake, British Columbia

text: Oncorhynchus nerka

text: male

text: Operculum


text: University of British Columbia Okanagan

characteristic: INSDC first public

text: live

text: Model organism or animal

text: not collected

text: GT-seq demultiplexed raw reads

text: mature adult

text: F1 hybrid

text: Canada: Skaha Lake, British Columbia

text: Oncorhynchus nerka

text: female

text: Operculum


text: University of British Columbia Okanagan

text: live

text: Model organism or animal

text: not collected

text: GT-seq demultiplexed raw reads

text: mature adult

text: sockeye

text: Canada: Skaha Lake, British Columbia

text: Oncorhynchus nerka

text: male

text: Operculum

characteristic: tissue


text: University of British Columbia Okanagan

characteristic: INSDC last update

text: live

text: Model organism or animal

text: not collected

text: GT-seq demultiplexed raw reads

text: mature adult

text: F2 hybrid

text: Canada: Skaha Lake, British Columbia

text: Oncorhynchus nerka

text: female

text: Operculum


text: University of British Columbia Okanagan

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

text: not collected

text: GT-seq demultiplexed raw reads

text: mature adult

text: hybrid

text: Canada: Skaha Lake, British Columbia

text: Oncorhynchus nerka

text: female

text: Operculum


text: University of British Columbia Okanagan

text: live

characteristic: INSDC status

text: Model organism or animal

text: not collected

text: GT-seq demultiplexed raw reads

text: mature adult

text: hybrid

text: Canada: Skaha Lake, British Columbia

text: Oncorhynchus nerka

text: male

text: Operculum


text: University of British Columbia Okanagan

text: live

text: Model organism or animal

characteristic: NCBI submission model

text: not collected

text: GT-seq demultiplexed raw reads

text: mature adult

text: hybrid

text: Canada: Skaha Lake, British Columbia

text: Oncorhynchus nerka

text: Operculum


text: University of British Columbia Okanagan

text: live

text: Model organism or animal

characteristic: NCBI submission package

text: not collected

text: GT-seq demultiplexed raw reads

text: mature adult

text: stream-spawning kokanee

text: Canada: Skaha Lake, British Columbia

text: Oncorhynchus nerka

text: male

text: Operculum


text: University of British Columbia Okanagan

text: live

text: Model organism or animal

characteristic: SRA accession

text: not collected

text: GT-seq demultiplexed raw reads

text: mature adult

text: stream-spawning kokanee

text: Canada: Skaha Lake, British Columbia

text: Oncorhynchus nerka

text: female

text: Operculum


text: live

text: Generic

text: none (input)

characteristic: chip antibody

text: wild-type

characteristic: genotype

text: Mus musculus

characteristic: organism

text: Myofibers

text: Regenerating myofibers were isolated for the tibialis anterior muscle at 14 days post induction of injury.

text: wild-type regenerating myofibers, replicate 1


text: live

text: Generic

text: H3K27me3 (Abcam, #ab6002)

text: Mus musculus

text: Myofibers

text: H3K27me3-ChipSeq from HIF1dPA regenerating myofibers, replicate 3

characteristic: title


text: live

text: Generic

text: H3K9me3 (Abcam, #ab8898)

text: Mus musculus

text: Myofibers

text: H3K9me3-ChipSeq from HIF1dPA regenerating myofibers, replicate 3


text: live

text: Generic

text: H3K27me3 (Abcam, #ab6002)

text: Mus musculus

text: Myofibers

text: H3K27me3-ChipSeq from HIF1dPA regenerating myofibers, replicate 2


text: live

text: Generic

text: H3K9me3 (Abcam, #ab8898)

text: Mus musculus

text: Myofibers

text: H3K9me3-ChipSeq from HIF1dPA regenerating myofibers, replicate 2


text: University of Texas Southwestern Medical Center

text: live

text: Generic

text: H3K27me3 (Abcam, #ab6002)

text: Mus musculus

text: Myofibers

text: H3K27me3-ChipSeq from HIF1dPA regenerating myofibers, replicate 1


text: live

text: Generic

text: H3K9me3 (Abcam, #ab8898)

text: Mus musculus

text: Myofibers

text: H3K9me3-ChipSeq from HIF1dPA regenerating myofibers, replicate 1


text: live

text: Generic

text: H3K27me3 (Abcam, #ab6002)

text: vhl-/-

text: Mus musculus

text: Myofibers

text: H3K27me3-ChipSeq from vhl-/- regenerating myofibers, replicate 3


text: live

text: Generic

text: H3K9me3 (Abcam, #ab8898)

text: vhl-/-

text: Mus musculus

text: Myofibers

text: H3K9me3-ChipSeq from vhl-/- regenerating myofibers, replicate 3


text: live

text: Generic

text: H3K27me3 (Abcam, #ab6002)

text: vhl-/-

text: Mus musculus

text: Myofibers

text: H3K27me3-ChipSeq from vhl-/- regenerating myofibers, replicate 2


text: live

text: Generic

text: H3K9me3 (Abcam, #ab8898)

text: vhl-/-

text: Mus musculus

text: Myofibers

text: H3K9me3-ChipSeq from vhl-/- regenerating myofibers, replicate 2


text: live

text: Generic

text: H3K27me3 (Abcam, #ab6002)

text: vhl-/-

text: Mus musculus

text: Myofibers

text: H3K27me3-ChipSeq from vhl-/- regenerating myofibers, replicate 1


text: live

text: Generic

text: H3K9me3 (Abcam, #ab8898)

text: vhl-/-

text: Mus musculus

text: Myofibers

text: H3K9me3-ChipSeq from vhl-/- regenerating myofibers, replicate 1


text: live

text: Generic

text: H3K27me3 (Abcam, #ab6002)

text: Mus musculus

text: Myofibers

text: H3K27me3-ChipSeq from mfn2-/- regenerating myofibers, replicate 3


text: live

text: Generic

text: H3K9me3 (Abcam, #ab8898)

text: Mus musculus

text: Myofibers

text: H3K9me3-ChipSeq from mfn2-/- regenerating myofibers, replicate 3


text: live

text: Generic

text: H3K27me3 (Abcam, #ab6002)

text: Mus musculus

text: Myofibers

text: Regenerating myofibers were isolated for the tibialis anterior muscle at 14 days post induction of injury.

text: H3K27me3-ChipSeq from mfn2-/- regenerating myofibers, replicate 2


text: live

text: Generic

text: H3K9me3 (Abcam, #ab8898)

text: Mus musculus

text: Myofibers

text: H3K9me3-ChipSeq from mfn2-/- regenerating myofibers, replicate 2


text: live

text: Generic

text: H3K27me3 (Abcam, #ab6002)

text: Mus musculus

text: Myofibers

text: H3K27me3-ChipSeq from mfn2-/- regenerating myofibers, replicate 1


text: live

text: Generic

text: H3K9me3 (Abcam, #ab8898)

text: Mus musculus

text: Myofibers

text: H3K9me3-ChipSeq from mfn2-/- regenerating myofibers, replicate 1


text: live

text: Generic

text: H3K27me3 (Abcam, #ab6002)

text: wild-type

text: Mus musculus

text: Myofibers

text: H3K27me3-ChipSeq from wild-type regenerating myofibers, replicate 3


text: University of Texas Southwestern Medical Center

text: live

text: Generic

text: H3K9me3 (Abcam, #ab8898)

text: wild-type

text: Mus musculus

text: Myofibers

text: H3K9me3-ChipSeq from wild-type regenerating myofibers, replicate 3


text: live

text: Generic

text: H3K27me3 (Abcam, #ab6002)

text: wild-type

text: Mus musculus

text: Myofibers

text: H3K27me3-ChipSeq from wild-type regenerating myofibers, replicate 2


text: live

text: Generic

text: H3K9me3 (Abcam, #ab8898)

text: wild-type

text: Mus musculus

text: Myofibers

text: H3K9me3-ChipSeq from wild-type regenerating myofibers, replicate 2


text: live

text: Generic

text: H3K27me3 (Abcam, #ab6002)

text: wild-type

text: Mus musculus

text: Myofibers

text: H3K27me3-ChipSeq from wild-type regenerating myofibers, replicate 1


text: live

text: Generic

text: H3K9me3 (Abcam, #ab8898)

text: wild-type

text: Mus musculus

text: Myofibers

text: H3K9me3-ChipSeq from wild-type regenerating myofibers, replicate 1


text: live

text: Generic

text: none (input)

text: wild-type

text: Mus musculus

text: Activated muscle stem cells

text: Activated muscle stem cells purified from injured mouse tibialis anterior muscle.

text: Input activated muscle stem cells, replicate 1


text: live

text: Generic

text: anti-Myog (DSHB, #F5D)

text: wild-type

text: Mus musculus

text: Activated muscle stem cells

text: Myog Chip-seq from activated muscle stem cells, replicate 3


text: live

text: Generic

text: anti-Myod (Santa Cruz Biotechnology, sc-32758X)

text: wild-type

text: Mus musculus

text: Activated muscle stem cells

text: Myod Chip-seq from activated muscle stem cells, replicate 3


text: live

text: Generic

text: anti-Myog (DSHB, #F5D)

text: wild-type

text: Mus musculus

text: Activated muscle stem cells

text: Myog Chip-seq from activated muscle stem cells, replicate 2


text: live

text: Generic

text: wild-type

text: Mus musculus

text: Activated muscle stem cells

text: Myod Chip-seq from activated muscle stem cells, replicate 2


text: live

text: Generic

text: anti-Myog (DSHB, #F5D)

text: wild-type

text: Mus musculus

text: Activated muscle stem cells

text: Myog Chip-seq from activated muscle stem cells, replicate 1


text: live

text: Generic

text: wild-type

text: Mus musculus

text: Activated muscle stem cells

text: Myod Chip-seq from activated muscle stem cells, replicate 1


text: live

text: Generic

text: none (input)

text: wild-type

text: Mus musculus

text: Quiescent muscle stem cells

text: Quiescent muscle stem cells purified from uninjured mouse tibialis anterior muscle.

text: Input quiescent muscle stem cells, replicate 1


text: University of Texas Southwestern Medical Center

text: live

text: Generic

text: anti-Myog (DSHB, #F5D)

text: wild-type

text: Mus musculus

text: Quiescent muscle stem cells

text: Myog Chip-seq from quiescent muscle stem cells, replicate 3


text: live

text: Generic

text: wild-type

text: Mus musculus

text: Quiescent muscle stem cells

text: Myod Chip-seq from quiescent muscle stem cells, replicate 3


text: live

text: Generic

text: anti-Myog (DSHB, #F5D)

text: wild-type

text: Mus musculus

text: Quiescent muscle stem cells

text: Myog Chip-seq from quiescent muscle stem cells, replicate 2


text: live

text: Generic

text: wild-type

text: Mus musculus

text: Quiescent muscle stem cells

text: Myod Chip-seq from quiescent muscle stem cells, replicate 2


text: live

text: Generic

text: anti-Myog (DSHB, #F5D)

text: wild-type

text: Mus musculus

text: Quiescent muscle stem cells

text: Myog Chip-seq from quiescent muscle stem cells, replicate 1


text: live

text: Generic

text: wild-type

text: Mus musculus

text: Quiescent muscle stem cells

text: Myod Chip-seq from quiescent muscle stem cells, replicate 1


text: live

text: Generic

text: none (input)

text: wild-type

text: Mus musculus

text: Myofibers

text: Regenerating myofibers were isolated for the tibialis anterior muscle at 14 days post induction of injury.

text: Input from wild-type regenerating myofibers, replicate 1


text: live

text: Generic

text: anti-NFAT1 (Santa Cruz Biotechnology, sc-32758X)

text: Mus musculus

text: Myofibers

text: NFAT1-chipseq from Mfn2-/- regenerating myofibers, replicate 2


text: live

text: Generic

text: Mus musculus

text: Myofibers

text: NFAT1-chipseq from Mfn2-/- regenerating myofibers, replicate 1


text: live

text: Generic

text: wild-type

text: Mus musculus

text: Myofibers

text: NFAT1-chipseq from wild-type regenerating myofibers, replicate 2


text: live

text: Generic

text: wild-type

text: Mus musculus

text: Myofibers

text: NFAT1-chipseq from wild-type regenerating myofibers, replicate 1


text: Lessnick, CCCBD, Nationwide Children's Hospital

text: live

text: Generic

text: parental

characteristic: condition

text: Homo sapiens

characteristic: replicate

text: A673 Ewing sarcoma cell line

text: A673-EWS/FLI-CUT&Tag 1


text: live

text: Generic

text: parental

text: Homo sapiens

text: A673 Ewing sarcoma cell line

text: A673-EWS/FLI-CUT&Tag 2


text: live

text: Generic

text: parental

text: Homo sapiens

text: A673 Ewing sarcoma cell line

text: A673-Rb-IgG-CUT&Tag 1


text: live

text: Generic

text: parental

text: Homo sapiens

text: A673 Ewing sarcoma cell line

text: A673-Rb-IgG-CUT&Tag 2


text: live

text: Generic

text: parental

text: Homo sapiens

text: TC71 Ewing sarcoma cell line

text: TC71-EWS/FLI-CUT&Tag 1


text: live

text: Generic

text: parental

text: Homo sapiens

text: TC71 Ewing sarcoma cell line

text: TC71-EWS/FLI-CUT&Tag 2


text: live

text: Generic

text: parental

text: Homo sapiens

text: TC71 Ewing sarcoma cell line

text: TC71-Rb-IgG-CUT&Tag 1


text: live

text: Generic

text: parental

text: Homo sapiens

text: TC71 Ewing sarcoma cell line

text: TC71-Rb-IgG-CUT&Tag 2


text: live

text: Generic

text: parental

text: Homo sapiens

text: EWS-502 Ewing sarcoma cell line

text: EWS502-EWS/FLI-CUT&Tag 1


text: live

text: Generic

text: parental

text: Homo sapiens

text: EWS-502 Ewing sarcoma cell line

text: EWS502-EWS/FLI-CUT&Tag 2


text: live

text: Generic

text: parental

text: Homo sapiens

text: EWS-502 Ewing sarcoma cell line

text: EWS502-Rb-IgG-CUT&Tag 1


text: live

text: Generic

text: parental

text: Homo sapiens

text: EWS-502 Ewing sarcoma cell line

text: EWS502-Rb-IgG-CUT&Tag 2


text: live

text: Generic

text: parental

text: Homo sapiens

text: SK-N-MC Ewing sarcoma cell line

text: SKNMC-EWS/FLI-CUT&Tag 1


text: live

text: Generic

text: parental

text: Homo sapiens

text: SK-N-MC Ewing sarcoma cell line

text: SKNMC-EWS/FLI-CUT&Tag 2


text: live

text: Generic

text: parental

text: Homo sapiens

text: SK-N-MC Ewing sarcoma cell line

text: SKNMC-Rb-IgG-CUT&Tag 1


text: live

text: Generic

text: parental

text: Homo sapiens

text: SK-N-MC Ewing sarcoma cell line

text: SKNMC-Rb-IgG-CUT&Tag 2


text: live

text: Generic

text: parental

text: Homo sapiens

text: TTC-466 Ewing sarcoma cell line

text: TTC466-EWS/ERG-CUT&Tag 1


text: live

text: Generic

text: parental

text: Homo sapiens

text: TTC-466 Ewing sarcoma cell line

text: TTC466-EWS/ERG-CUT&Tag 2


text: live

text: Generic

text: parental

text: Homo sapiens

text: TTC-466 Ewing sarcoma cell line

text: TTC466-Rb-IgG-CUT&Tag 1


text: live

text: Generic

text: parental

text: Homo sapiens

text: TTC-466 Ewing sarcoma cell line

text: TTC466-Rb-IgG-CUT&Tag 2


text: live

text: Generic

text: EF-Endo

text: Homo sapiens

text: A673 Ewing sarcoma cell line

text: A673-EWS/FLI-Endo-HiC 1

text: iLuc + empty cDNA

characteristic: transduced shrna


characteristic: External Id

text: live

text: Generic

text: EF-Endo

text: Homo sapiens

text: A673 Ewing sarcoma cell line

text: A673-EWS/FLI-Endo-HiC 2

text: iLuc + empty cDNA


characteristic: INSDC center name

text: live

text: Generic

text: EF-KD

text: Homo sapiens

text: A673 Ewing sarcoma cell line

text: A673-EWS/FLI-KD-HiC 1

text: iEF + empty cDNA


characteristic: INSDC first public

text: live

text: Generic

text: EF-KD

text: Homo sapiens

text: A673 Ewing sarcoma cell line

text: A673-EWS/FLI-KD-HiC 2

text: iEF + empty cDNA


text: live

text: Generic

text: EF-Rescue

text: Homo sapiens

text: A673 Ewing sarcoma cell line

text: A673-EWS/FLI-Rescue-HiC 1

text: iEF + 3XFLAG-EWS/FLI


text: live

text: Generic

text: EF-Rescue

text: Homo sapiens

text: A673 Ewing sarcoma cell line

text: A673-EWS/FLI-Rescue-HiC 2

text: iEF + 3XFLAG-EWS/FLI


text: live

text: Generic

text: EF-Endo

text: Homo sapiens

text: A673 Ewing sarcoma cells

text: A673-EFEndo-CTCF-CUT&Tag 1

text: iLuc + empty cDNA


text: live

text: Generic

text: EF-Endo

text: Homo sapiens

text: A673 Ewing sarcoma cells

text: A673-EFEndo-CTCF-CUT&Tag 2

text: iLuc + empty cDNA


text: live

text: Generic

text: EF-Endo

text: Homo sapiens

text: A673 Ewing sarcoma cells

text: A673-EFEndo-Rabbit-IgG-CUT&Tag 1

text: iLuc + empty cDNA


text: live

text: Generic

text: EF-Endo

text: Homo sapiens

text: A673 Ewing sarcoma cells

text: A673-EFEndo-Rabbit-IgG-CUT&Tag 2

text: iLuc + empty cDNA


text: live

text: Generic

text: EF-KD

text: Homo sapiens

text: A673 Ewing sarcoma cells

text: A673-EFKD-CTCF-CUT&Tag 1

text: iEF + empty cDNA


text: live

text: Generic

text: EF-KD

text: Homo sapiens

text: A673 Ewing sarcoma cells

text: A673-EFKD-CTCF-CUT&Tag 2

text: iEF + empty cDNA


text: live

text: Generic

text: EF-KD

text: Homo sapiens

text: A673 Ewing sarcoma cells

text: A673-EFKD-Rabbit-IgG-CUT&Tag 1

text: iEF + empty cDNA


text: live

text: Generic

text: EF-KD

text: Homo sapiens

text: A673 Ewing sarcoma cells

text: A673-EFKD-Rabbit-IgG-CUT&Tag 2

text: iEF + empty cDNA


text: live

text: Generic

text: EF-Rescue

text: Homo sapiens

text: A673 Ewing sarcoma cells

text: A673-EFRescue-CTCF-CUT&Tag 1

text: iEF + 3XFLAG-EWS/FLI


text: live

text: Generic

text: EF-Rescue

text: Homo sapiens

text: A673 Ewing sarcoma cells

text: A673-EFRescue-CTCF-CUT&Tag 2

text: iEF + 3XFLAG-EWS/FLI


text: live

text: Generic

text: EF-Rescue

text: Homo sapiens

text: A673 Ewing sarcoma cells

text: A673-EFRescue-Rabbit-IgG-CUT&Tag 1

text: iEF + 3XFLAG-EWS/FLI


text: live

text: Generic

text: EF-Rescue

text: Homo sapiens

text: A673 Ewing sarcoma cells

text: A673-EFRescue-Rabbit-IgG-CUT&Tag 2

text: iEF + 3XFLAG-EWS/FLI


text: live

text: Generic

text: EF-Endo

text: Homo sapiens

text: TC71 Ewing sarcoma cells

text: TC71-EFEndo-CTCF-CUT&Tag 1

text: iLuc


text: live

text: Generic

text: EF-Endo

text: Homo sapiens

text: TC71 Ewing sarcoma cells

text: TC71-EFEndo-CTCF-CUT&Tag 2

text: iLuc


text: live

text: Generic

text: EF-Endo

text: Homo sapiens

text: TC71 Ewing sarcoma cells

text: TC71-EFEndo-Rabbit-IgG-CUT&Tag 1

text: iLuc


text: live

text: Generic

text: EF-Endo

text: Homo sapiens

text: TC71 Ewing sarcoma cells

text: TC71-EFEndo-Rabbit-IgG-CUT&Tag 2

text: iLuc


text: live

text: Generic

text: EF-KD

text: Homo sapiens

text: TC71 Ewing sarcoma cells

text: TC71-EFKD-CTCF-CUT&Tag 1

text: iEF


text: live

text: Generic

text: EF-KD

text: Homo sapiens

text: TC71 Ewing sarcoma cells

text: TC71-EFKD-CTCF-CUT&Tag 2

text: iEF


text: live

text: Generic

text: EF-KD

text: Homo sapiens

text: TC71 Ewing sarcoma cells

text: TC71-EFKD-Rabbit-IgG-CUT&Tag 1

text: iEF


text: live

text: Generic

text: EF-KD

text: Homo sapiens

text: TC71 Ewing sarcoma cells

text: TC71-EFKD-Rabbit-IgG-CUT&Tag 2

text: iEF


text: live

text: Generic

text: Homo sapiens

text: TC71 Ewing sarcoma cells

text: TC71-EFEndo-RNAseq 1

text: iLuc


text: live

text: Generic

text: Homo sapiens

text: TC71 Ewing sarcoma cells

text: TC71-EFEndo-RNAseq 2

text: iLuc


text: live

text: Generic

text: Homo sapiens

text: TC71 Ewing sarcoma cells

text: TC71-EFKD-RNAseq 1

text: iEF


text: live

text: Generic

text: Homo sapiens

text: TC71 Ewing sarcoma cells

text: TC71-EFKD-RNAseq 2

text: iEF


text: live

text: Generic

text: Homo sapiens

text: EF-Endo

characteristic: sample condition

text: A673 Ewing sarcoma cells

text: iLuc + empty cDNA


characteristic: INSDC last update

text: live

text: Generic

text: Homo sapiens

text: EF-KD

text: A673 Ewing sarcoma cells

text: iEF + empty cDNA


characteristic: INSDC secondary accession

text: live

text: Generic

text: Homo sapiens

text: EF-Rescue

text: A673 Ewing sarcoma cells

text: iEF + 3XFLAG-EWS/FLI


text: live

characteristic: INSDC status

text: Generic

text: Homo sapiens

text: EF-Endo

text: TC71 Ewing sarcoma cells

text: iLuc + empty cDNA


text: live

text: Generic

characteristic: NCBI submission model

text: Homo sapiens

text: EF-KD

text: TC71 Ewing sarcoma cells

text: iEF + empty cDNA


text: New York University

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Ligature

characteristic: description

text: USA

text: Mus musculus

characteristic: host

text: 40.7128 N 74.0060 W

text: metagenome

text: Metagenome or environmental sample from metagenome


text: 851CEndOral Swab

text: New York University

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 851CFirOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome

characteristic: organism


text: 853CEndOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome

characteristic: title


text: 853CFirOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 854CEndOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 854CFirOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 855CEndOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 855CFirOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 856CEndOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 856CFirOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 857CEndOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 857CFirOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 858CEndOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 858CFirOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 861CEndOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 861CFirOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 862CEndOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 862CFirOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 863CEndOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 863CFirOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 864CFirOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 866CFirOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 868CEndOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 868CFirOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 869CEndOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 869CFirOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 871CFirOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 872CFirOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 873CFirOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 875CFirOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 876CEndOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 876CFirOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 878CEndOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 878CFirOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 880CEndOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 880CFirOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 881CEndOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 881CFirOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 882CEndOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 882CFirOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 883CEndOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 883CFirOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 884CEndOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 884CFirOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 885CEndOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 885CFirOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 886CEndOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 886CFirOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 887CEndOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 887CFirOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 888CEndOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 888CFirOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 889CEndOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: 889CFirOral Swab

text: New York University

text: live

text: Metagenome or environmental

text: Oral Swab

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: New York University

text: live

text: Metagenome or environmental

text: Ligature

text: USA

text: Mus musculus

text: 40.7128 N 74.0060 W

text: metagenome


text: New York University

text: live

text: Metagenome or environmental

text: subgingival plaque

text: USA

text: Homo sapiens

text: 40.7128 N 74.0060 W

text: metagenome


text: New York University

text: live

text: Metagenome or environmental

text: ExptControl

text: USA

text: EB buffer

text: 40.7128 N 74.0060 W

text: metagenome


text: UPMC Children's Hospital of Pittsburgh

text: live

text: Generic

text: immunized

characteristic: group

text: Mus musculus

text: Lung

text: Spatial transcriptomics data from slice A1 (immunized mouse)


text: UPMC Children's Hospital of Pittsburgh

text: live

text: Generic

text: immunized

text: Mus musculus

text: Lung

text: Spatial transcriptomics data from slice A2 (immunized mouse)


text: UPMC Children's Hospital of Pittsburgh

text: live

text: Generic

text: re-challenged

text: Mus musculus

text: Lung

text: Spatial transcriptomics data from slice A3 (re-challenged mouse)


text: UPMC Children's Hospital of Pittsburgh

text: live

text: Generic

text: re-challenged

text: Mus musculus

text: Lung

text: Spatial transcriptomics data from slice A4 (re-challenged mouse)


text: UPMC Children's Hospital of Pittsburgh

text: live

text: Generic

text: re-challenged

text: Mus musculus

text: Lung

text: RNA data from re-challenged mouse


text: UPMC Children's Hospital of Pittsburgh

text: live

text: Generic

text: re-challenged

text: Mus musculus

text: Lung

text: ATAC data from re-challenged mouse


text: Ann Romney Center for Neurologic Diseases, Neurology, Brigham and Women's Hospital

text: live

text: Generic

text: 6 months

characteristic: age

text: Gpnmb-/- Tyrp1b-/-

characteristic: genotype

text: Mus musculus

text: Microglia

characteristic: strain

text: Retina

characteristic: tissue

text: Early disease DBA/2J animal 5 OS


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: 6 months

text: Gpnmb-/- Tyrp1b-/-

text: Mus musculus

text: Microglia

text: Retina

text: Early disease DBA/2J animal 4 OS


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: 6 months

text: Gpnmb-/- Tyrp1b-/-

text: Mus musculus

text: Microglia

text: Retina

text: Early disease DBA/2J animal 3 OD


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: 6 months

text: Gpnmb-/- Tyrp1b-/-

text: Mus musculus

text: Microglia

text: Retina

text: Early disease DBA/2J animal 2 OS


text: live

text: Generic

characteristic: NCBI submission package

text: 6 months

text: Gpnmb-/- Tyrp1b-/-

text: Mus musculus

text: Microglia

text: Retina

text: Early disease DBA/2J animal 1 OD


text: live

text: Generic

text: 12 months

text: Gpnmb+/+ Tyrp1b-/-

text: Mus musculus

text: Microglia

text: DBA/2J Gpnmb+

text: Retina

text: DBA/2J Gpnmb+ animal 5 OS


text: live

text: Generic

text: 12 months

text: Gpnmb+/+ Tyrp1b-/-

text: Mus musculus

text: Microglia

text: DBA/2J Gpnmb+

text: Retina

text: DBA/2J Gpnmb+ animal 5 OD


text: live

text: Generic

text: 12 months

text: Gpnmb+/+ Tyrp1b-/-

text: Mus musculus

text: Microglia

text: DBA/2J Gpnmb+

text: Retina

text: DBA/2J Gpnmb+ animal 4 OD


text: live

text: Generic

text: 12 months

text: Gpnmb+/+ Tyrp1b-/-

text: Mus musculus

text: Microglia

text: DBA/2J Gpnmb+

text: Retina

text: DBA/2J Gpnmb+ animal 3 OS


text: live

text: Generic

text: 12 months

text: Gpnmb+/+ Tyrp1b-/-

text: Mus musculus

text: Microglia

text: DBA/2J Gpnmb+

text: Retina

text: DBA/2J Gpnmb+ animal 3 OD


text: live

text: Generic

text: 12 months

text: Gpnmb+/+ Tyrp1b-/-

text: Mus musculus

text: Microglia

text: DBA/2J Gpnmb+

text: Retina

text: DBA/2J Gpnmb+ animal 2 OS


text: live

text: Generic

text: 12 months

text: Gpnmb+/+ Tyrp1b-/-

text: Mus musculus

text: Microglia

text: DBA/2J Gpnmb+

text: Retina

text: DBA/2J Gpnmb+ animal 2 OD


text: live

text: Generic

text: 12 months

text: Gpnmb+/+ Tyrp1b-/-

text: Mus musculus

text: Microglia

text: DBA/2J Gpnmb+

text: Retina

text: DBA/2J Gpnmb+ animal 1 OS


text: live

text: Generic

text: 12 months

text: Gpnmb+/+ Tyrp1b-/-

text: Mus musculus

text: Microglia

text: DBA/2J Gpnmb+

text: Retina

text: DBA/2J Gpnmb+ animal 1 OD


text: live

text: Generic

text: 12 months

text: Gpnmb-/- Tyrp1b-/-

text: Mus musculus

text: Microglia

text: Retina

text: DBA/2J animal 5 OS


text: live

text: Generic

text: 12 months

text: Gpnmb-/- Tyrp1b-/-

text: Mus musculus

text: Microglia

text: Retina

text: DBA/2J animal 5 OD


text: live

text: Generic

text: 12 months

text: Gpnmb-/- Tyrp1b-/-

text: Mus musculus

text: Microglia

text: Retina

text: DBA/2J animal 4 OS


text: live

text: Generic

text: 12 months

text: Gpnmb-/- Tyrp1b-/-

text: Mus musculus

text: Microglia

text: Retina

text: DBA/2J animal 4 OD


text: live

text: Generic

text: 12 months

text: Gpnmb-/- Tyrp1b-/-

text: Mus musculus

text: Microglia

text: Retina

text: DBA/2J animal 3 OS


text: live

text: Generic

text: 12 months

text: Gpnmb-/- Tyrp1b-/-

text: Mus musculus

text: Microglia

text: Retina

text: DBA/2J animal 3 OD


text: live

text: Generic

text: 12 months

text: Gpnmb-/- Tyrp1b-/-

text: Mus musculus

text: Microglia

text: Retina

text: DBA/2J animal 2 OS


text: live

text: Generic

text: 12 months

text: Gpnmb-/- Tyrp1b-/-

text: Mus musculus

text: Microglia

text: Retina

text: DBA/2J animal 2 OD


text: live

text: Generic

text: 12 months

text: Gpnmb-/- Tyrp1b-/-

text: Mus musculus

text: Microglia

text: Retina

text: DBA/2J animal 1 OS


text: live

text: Generic

text: 12 months

text: Gpnmb-/- Tyrp1b-/-

text: Mus musculus

text: Microglia

text: Retina

text: DBA/2J animal 1 OD


text: live

text: Generic

text: 12 weeks

text: Apoe -/-

text: Mus musculus

text: Microglia

text: Apoe KO

text: Retina

text: Apoe -/- non-phagoctyic pooled sample 6

text: intravitreal injection of apoptotic neurons

characteristic: treatment


text: live

text: Generic

characteristic: SRA accession

text: 12 weeks

text: Apoe -/-

text: Mus musculus

text: Microglia

text: Apoe KO

text: Retina

text: Apoe -/- non-phagoctyic pooled sample 5


text: live

text: Generic

text: 12 weeks

text: Apoe -/-

text: Mus musculus

characteristic: organism

text: Microglia

text: Apoe KO

text: Retina

text: Apoe -/- non-phagoctyic pooled sample 4


text: live

text: Generic

text: 12 weeks

text: Apoe -/-

text: Mus musculus

text: Microglia

text: Apoe KO

text: Retina

text: Apoe -/- non-phagoctyic pooled sample 3

characteristic: title


text: live

text: Generic

text: 12 weeks

text: Apoe -/-

text: Mus musculus

text: Microglia

text: Apoe KO

text: Retina

text: Apoe -/- non-phagoctyic pooled sample 2


text: live

text: Generic

text: 12 weeks

text: Apoe -/-

text: Mus musculus

text: Microglia

text: Apoe KO

text: Retina

text: Apoe -/- non-phagoctyic pooled sample 1


text: live

text: Generic

text: 12 weeks

text: Apoe -/-

text: Mus musculus

text: Microglia

text: Apoe KO

text: Retina

text: Apoe -/- phagoctyic pooled sample 6


text: live

text: Generic

text: 12 weeks

text: Apoe -/-

text: Mus musculus

text: Microglia

text: Apoe KO

text: Retina

text: Apoe -/- phagoctyic pooled sample 5


text: live

text: Generic

text: 12 weeks

text: Apoe -/-

text: Mus musculus

text: Microglia

text: Apoe KO

text: Retina

text: Apoe -/- phagoctyic pooled sample 4


text: live

text: Generic

text: 12 weeks

text: Apoe -/-

text: Mus musculus

text: Microglia

text: Apoe KO

text: Retina

text: Apoe -/- phagoctyic pooled sample 3


text: live

text: Generic

text: 12 weeks

text: Apoe -/-

text: Mus musculus

text: Microglia

text: Apoe KO

text: Retina

text: Apoe -/- phagoctyic pooled sample 2


text: live

text: Generic

text: 12 weeks

text: Apoe -/-

text: Mus musculus

text: Microglia

text: Apoe KO

text: Retina

text: Apoe -/- phagoctyic pooled sample 1


text: live

text: Generic

text: 12 weeks

text: wild type

text: Mus musculus

text: Microglia

text: Retina

text: wild type non-phagocytic pooled sample 5


text: live

text: Generic

text: 12 weeks

text: wild type

text: Mus musculus

text: Microglia

text: Retina

text: wild type non-phagocytic pooled sample 4


text: live

text: Generic

text: 12 weeks

text: wild type

text: Mus musculus

text: Microglia

text: Retina

text: wild type non-phagocytic pooled sample 3


text: live

text: Generic

text: 12 weeks

text: wild type

text: Mus musculus

text: Microglia

text: Retina

text: wild type non-phagocytic pooled sample 2


text: live

text: Generic

text: 12 weeks

text: wild type

text: Mus musculus

text: Microglia

text: Retina

text: wild type non-phagocytic pooled sample 1


text: live

text: Generic

text: 12 weeks

text: wild type

text: Mus musculus

text: Microglia

text: Retina

text: wild type phagoctyic pooled sample 5


text: live

text: Generic

text: 12 weeks

text: wild type

text: Mus musculus

text: Microglia

text: Retina

text: wild type phagoctyic pooled sample 4


text: live

text: Generic

text: 12 weeks

text: wild type

text: Mus musculus

text: Microglia

text: Retina

text: wild type phagoctyic pooled sample 3


text: live

text: Generic

text: 12 weeks

text: wild type

text: Mus musculus

text: Microglia

text: Retina

text: wild type phagoctyic pooled sample 2


text: live

text: Generic

text: 12 weeks

text: wild type

text: Mus musculus

text: Microglia

text: Retina

text: wild type phagoctyic pooled sample 1


text: live

text: Generic

text: 12 weeks

text: wild type

text: Mus musculus

text: Microglia

text: Retina

text: naïve retina 4


text: live

text: Generic

text: 12 weeks

text: wild type

text: Mus musculus

text: Microglia

text: Retina

text: naïve retina 3


text: live

text: Generic

text: 12 weeks

text: wild type

text: Mus musculus

text: Microglia

text: Retina

text: naïve retina 2


text: live

text: Generic

text: 12 weeks

text: wild type

text: Mus musculus

text: Microglia

text: Retina

text: naïve retina 1


text: live

text: Generic

text: 12 weeks

text: wild type

text: Mus musculus

text: Microglia

text: Retina

text: sham-injected retina 4

text: sham injection


text: live

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text: 12 weeks

text: wild type

text: Mus musculus

text: Microglia

text: Retina

text: sham-injected retina 3

text: sham injection


text: live

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text: 12 weeks

text: wild type

text: Mus musculus

text: Microglia

text: Retina

text: sham-injected retina 2

text: sham injection


text: live

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text: 12 weeks

text: wild type

text: Mus musculus

text: Microglia

text: Retina

text: sham-injected retina 1

text: sham injection


text: live

text: Generic

text: 12 weeks

text: wild type

text: Mus musculus

text: Microglia

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text: live

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text: Mus musculus

text: Microglia

text: Retina

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text: live

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text: wild type

text: Mus musculus

text: Microglia

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text: live

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text: 12 weeks

text: wild type

text: Mus musculus

text: Microglia

text: Retina

text: microbead-injected retina 3

text: microbead injection


text: live

text: Generic

text: 12 weeks

text: wild type

text: Mus musculus

text: Microglia

text: Retina

text: microbead-injected retina 2

text: microbead injection


text: live

text: Generic

text: 12 weeks

text: wild type

text: Mus musculus

text: Microglia

text: Retina

text: microbead-injected retina 1

text: microbead injection


text: live

text: Generic

text: 12 weeks

text: APOE E4/E4

text: Mus musculus

text: Microglia

text: APOE E4

text: Retina

text: APOE E4 microbead-injected retina 3

text: microbead injection


text: live

text: Generic

text: 12 weeks

text: APOE E4/E4

text: Mus musculus

text: Microglia

text: APOE E4

text: Retina

text: APOE E4 microbead-injected retina 2

text: microbead injection


text: live

text: Generic

text: 12 weeks

text: APOE E4/E4

text: Mus musculus

text: Microglia

text: APOE E4

text: Retina

text: APOE E4 microbead-injected retina 1

text: microbead injection


text: live

text: Generic

text: 12 weeks

text: APOE E3/E3

text: Mus musculus

text: Microglia

text: APOE E3

text: Retina

text: APOE E3 microbead-injected retina 3

text: microbead injection


text: live

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text: 12 weeks

text: APOE E3/E3

text: Mus musculus

text: Microglia

text: APOE E3

text: Retina

text: APOE E3 microbead-injected retina 2

text: microbead injection


text: live

text: Generic

text: 12 weeks

text: APOE E3/E3

text: Mus musculus

text: Microglia

text: APOE E3

text: Retina

text: APOE E3 microbead-injected retina 1

text: microbead injection


text: live

text: Generic

text: 12 weeks

text: APOE E4/E4

text: Mus musculus

text: Microglia

text: APOE E4

text: Retina

text: APOE E4 sham-injected retina 4

text: sham-injection


text: live

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text: 12 weeks

text: APOE E4/E4

text: Mus musculus

text: Microglia

text: APOE E4

text: Retina

text: APOE E4 sham-injected retina 3

text: sham injection


text: live

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text: 12 weeks

text: APOE E4/E4

text: Mus musculus

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text: APOE E4

text: Retina

text: APOE E4 sham-injected retina 2

text: sham injection


text: live

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text: 12 weeks

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text: Mus musculus

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text: live

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text: Mus musculus

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text: APOE E3

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text: live

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text: Mus musculus

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text: live

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text: live

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text: live

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text: live

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text: live

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characteristic: ENA-FIRST-PUBLIC

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characteristic: Submitter Id

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characteristic: broker name

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text: Homo sapiens

text: HAP1 cell line

text: HAP1 cell line HAP_MS_2_S47262


text: public

text: NCBI

text: control cell line treated with MS275

text: human

text: Homo sapiens

text: HAP1 cell line

text: HAP1 cell line HAP_MS_1_S47267


text: public

text: NCBI

text: control cell line

text: human

text: Homo sapiens

text: HAP1 cell line

text: HAP1 cell line HAP_3_S47268


text: public

text: NCBI

text: control cell line

text: human

text: Homo sapiens

text: HAP1 cell line

text: HAP1 cell line HAP_2_S47265


text: public

text: NCBI

text: control cell line

text: human

text: Homo sapiens

text: HAP1 cell line

text: HAP1 cell line HAP_1_S47266


text: Ann Romney Center for Neurologic Diseases, Neurology, Brigham and Women's Hospital

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 12 weeks

characteristic: age

text: Apoe -/-

text: Mus musculus

text: Microglia

characteristic: strain

text: Retina

characteristic: tissue

text: Apoe -/- microbead-injected retina 4

text: microbead injection


text: live

text: Generic

characteristic: SRA accession

text: 12 weeks

text: Apoe -/-

text: Mus musculus

characteristic: organism

text: Microglia

text: Retina

text: Apoe -/- microbead-injected retina 3

characteristic: title

text: microbead injection

characteristic: treatment


characteristic: External Id

text: live

text: Generic

text: 12 weeks

text: Apoe -/-

text: Mus musculus

text: Microglia

text: Retina

text: Apoe -/- microbead-injected retina 2

text: microbead injection


text: live

text: Generic

text: 12 weeks

text: Apoe -/-

characteristic: genotype

text: Mus musculus

text: Microglia

text: Retina

text: Apoe -/- microbead-injected retina 1

text: microbead injection


characteristic: INSDC first public

text: live

text: Generic

text: 12 weeks

text: Apoe -/-

text: Mus musculus

text: Microglia

text: Retina

text: Apoe -/- sham-injected retina 4

text: sham-injection


characteristic: INSDC last update

text: live

text: Generic

text: 12 weeks

text: Apoe -/-

text: Mus musculus

text: Microglia

text: Retina

text: Apoe -/- sham-injected retina 3

text: sham injection


text: live

characteristic: INSDC status

text: Generic

text: 12 weeks

text: Apoe -/-

text: Mus musculus

text: Microglia

text: Retina

text: Apoe -/- sham-injected retina 2

text: sham injection


text: live

text: Generic

text: 12 weeks

text: Apoe -/-

text: Mus musculus

text: Microglia

text: Retina

text: Apoe -/- sham-injected retina 1

text: sham injection


name: Genome of Methanoplanus endosymbiosus DSM 3599

text: MIGS.ba

characteristic: BioSampleModel

text: MIGS/MIMS/MIMARKS.host-associated

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: pda|benbear.xe@gmail.com

characteristic: INSDC center alias

text: pda|benbear.xe@gmail.com

text: public

characteristic: Submitter Id

text: NCBI

characteristic: broker name

text: ciliate Metopus contortus

text: ciliate Metopus contortus

text: ciliate Metopus contortus

text: Metopus contortus

characteristic: host

text: bought from DSMZ

text: Methanoplanus endosymbiosus

text: DSM 3599

text: Methanoplanus endosymbiosus

text: type strain of Methanoplanus endosymbiosus

characteristic: type-material


text: Ghent University

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Leukemic stem cell

characteristic: cellular subpopulation

text: Leukemic

characteristic: disease state

text: Homo sapiens

text: Bone marrow


characteristic: External Id

text: Ghent University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Lymphocyt

text: Leukemic

text: Homo sapiens

characteristic: organism

text: Bone marrow

characteristic: title


text: Ghent University

text: live

characteristic: INSDC status

text: Generic

text: Myeloblast

text: Leukemic

text: Homo sapiens

text: Bone marrow


text: Ghent University

text: live

text: Generic

text: Lymphocyt

text: Healthy control

text: Homo sapiens

text: Bone marrow


text: Ghent University

text: live

text: Generic

text: Myeloblast

text: Healthy control

text: Homo sapiens

text: Cord blood


text: Ghent University

text: live

text: Generic

text: Hematopoeitic stem cell

text: Healthy control

text: Homo sapiens

text: Cord blood


name: Microdochium nivale highly virulent strain F00608

text: MIGS.eu

characteristic: BioSampleModel

text: MIGS/MIMS/MIMARKS.plant-associated

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: pda|itsers

characteristic: INSDC center alias

text: pda|itsers

text: public

characteristic: Submitter Id

text: NCBI

text: Microdochium nivale is a phytopathogenic fungus causing pink snow mold in winter cereals. This highly virulent strain was isolated from winter rye in spring 2019 for the collection of fungal pathogens of the Laboratory of Plant Infectious Diseases FRC KazSC RAS (Kazan, Russia).

characteristic: description

text: temperate biome[ENVO:01001831]

text: agricultural field [ENVO:00000114]

text: shoot system [PO:0009006]

text: Russia: fields of Tatar Research Institute of Agriculture, Tatarstan

text: Secale cereale

text: 55.6365 N 49.3159 E

text: Microdochium nivale

characteristic: strain


text: public

text: NCBI

characteristic: broker name

characteristic: cell line

text: human

characteristic: common name

text: Homo sapiens

text: HCT116 cell

text: Input (HSF1)_ChIP-Seq


text: public

characteristic: SRA accession

text: NCBI

characteristic: chip antibody

text: human

text: Homo sapiens

text: HCT116 cell


characteristic: External Id

characteristic: INSDC first public

text: public

text: NCBI

text: human

text: Homo sapiens

text: HCT116 cell

text: Input (H3K27ac)_ChIP-Seq


characteristic: INSDC last update

text: public

text: CTCF

characteristic: antibody

text: NCBI

text: house mouse

text: wild type

characteristic: genotype

text: Mus musculus

characteristic: organism

text: primary CD69-CD4+CD8+ cells

text: thymus

characteristic: tissue


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: INSDC status

text: NCBI

text: house mouse

text: wild type

text: Mus musculus

text: primary CD69-CD4+CD8+ cells

text: thymus

characteristic: title


text: public

characteristic: Submitter Id

text: NCBI

text: house mouse

text: wild type

text: Mus musculus

text: primary CD69-CD4+CD8+ cells

characteristic: strain

text: thymus


text: public

text: NCBI

characteristic: broker name

text: house mouse

text: CTCF-/-, Rad21-/-

text: Mus musculus

text: primary CD69-CD4+CD8+ cells

text: thymus


text: public

text: NCBI

text: house mouse

characteristic: common name

text: CTCF-/-

text: Mus musculus

text: primary CD69-CD4+CD8+ cells

text: thymus


text: Manipal Academy of Higher Education

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: India: Karnataka

text: Homo sapiens

characteristic: host

text: stool

text: Clostridium tertium

text: whole organism

text: Microbe sample from Clostridium tertium


characteristic: External Id

text: Manipal Academy of Higher Education

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: India: Karnataka

text: Homo sapiens

text: stool

text: Clostridium butyricum

text: whole organism

text: Microbe sample from Clostridium butyricum


text: public

characteristic: SRA accession

text: male

characteristic: Sex

text: 10 Week

characteristic: age

text: NCBI

text: Bone marrow B lineage cells

characteristic: cell type

text: house mouse

text: Mus musculus

characteristic: organism

text: Bone marrow B lineage cells

text: C57BL/6, 56R heterozygous


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: INSDC status

text: male

text: 10 Week

text: NCBI

text: Bone marrow B lineage cells

text: house mouse

text: Mus musculus

text: Bone marrow B lineage cells

text: C57BL/6, Laptm5KO56R heterozygous

characteristic: title


text: public

text: male

characteristic: Submitter Id

text: 10 Week

text: NCBI

characteristic: broker name

text: B220+ bone marrow cells

text: house mouse

characteristic: common name

text: Mus musculus

text: B220+ bone marrow cells

text: C57BL/6, 56R heterozygous

characteristic: strain


text: public

text: male

text: 10 Week

text: NCBI

text: B220+ bone marrow cells

text: house mouse

text: Mus musculus

text: B220+ bone marrow cells

text: C57BL/6, Laptm5KO56R heterozygous


text: MIMS.me

characteristic: BioSampleModel

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

text: NCBI

text: 0 - 5 cm

characteristic: depth

text: control for 018

characteristic: description

characteristic: elev

text: temperate woodland biome [ENVO:01000221]

text: forest soil [ENVO:00002261] | ultisol [ENVO:01001397] | loam [ENVO:00002258]

text: surface soil [ENVO:02000059]

text: control

text: USA: Knoxville, TN

text: 35.94 N 83.94 W

text: soil metagenome

characteristic: ph

text: yes, 5 (controls from 0, 1500, 2000, 3000, and 4000 ADH)

text: soil metagenome


text: MIMS.me

characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: SRA accession

text: NCBI

text: 0 - 5 cm

text: 018 0 ADH soil sample

text: surface soil [ENVO:02000059]

text: Human Decomposition

text: USA: Knoxville, TN

text: 35.94 N 83.94 W

text: soil metagenome

text: no

text: soil metagenome


text: MIMS.me

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: INSDC status

text: NCBI

text: 0 - 5 cm

text: 018 1500 ADH soil sample

text: surface soil [ENVO:02000059]

text: Human Decomposition

text: USA: Knoxville, TN

text: 35.94 N 83.94 W

text: soil metagenome

characteristic: organism

text: no

text: soil metagenome


text: MIMS.me

text: public

characteristic: Submitter Id

text: NCBI

characteristic: broker name

text: 0 - 5 cm

text: 018 2000 ADH soil sample

text: surface soil [ENVO:02000059]

text: Human Decomposition

text: USA: Knoxville, TN

text: 35.94 N 83.94 W

text: soil metagenome

text: no

text: soil metagenome

characteristic: title


text: MIMS.me

characteristic: BioSampleModel

characteristic: INSDC center alias

text: public

text: NCBI

text: 0 - 5 cm

text: 018 3000 ADH soil sample

text: surface soil [ENVO:02000059]

text: Human Decomposition

text: USA: Knoxville, TN

text: 35.94 N 83.94 W

text: soil metagenome

text: no

text: soil metagenome


text: MIMS.me

characteristic: INSDC center name

text: public

text: NCBI

text: 0 - 5 cm

characteristic: depth

text: 018 4000 ADH soil sample

text: surface soil [ENVO:02000059]

text: Human Decomposition

text: USA: Knoxville, TN

text: 35.94 N 83.94 W

text: soil metagenome

text: no

text: soil metagenome