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text: SARS-CoV-2/Human/USA/CA-CDC-QDX41592193/2022

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text: Nasal Swabs

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text: SARS-CoV-2/Human/USA/CA-CDC-QDX41592188/2022

text: CDC-OAMD

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text: SARS-CoV-2: clinical or host-associated

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text: Nasal Swabs

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text: Homo sapiens

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text: Quest Diagnostics Incorporated

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text: Nasal Swabs

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text: USA: California

text: Homo sapiens

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text: CDC-OAMD

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text: Nasal Swabs

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text: USA: California

text: Homo sapiens

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text: Nasal Swabs

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text: USA: California

text: Homo sapiens

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text: Nasal Swabs

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text: USA: California

text: Homo sapiens

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text: CDC-OAMD

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text: SARS-CoV-2: clinical or host-associated

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text: Nasal Swabs

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text: LDT

text: USA: California

text: Homo sapiens

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text: baseline surveillance (random sampling)


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text: CDC-OAMD

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text: Nasal Swabs

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text: LDT

text: USA: California

text: Homo sapiens

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text: baseline surveillance (random sampling)


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text: CDC-OAMD

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text: Quest Diagnostics Incorporated

text: Nasal Swabs

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text: USA: California

text: Homo sapiens

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text: CDC-OAMD

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text: USA: California

text: Homo sapiens

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text: Quest Diagnostics Incorporated

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text: USA: California

text: Homo sapiens

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text: baseline surveillance (random sampling)


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text: CDC-OAMD

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text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

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text: LDT

text: USA: California

text: Homo sapiens

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text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX41592151/2022

text: CDC-OAMD

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text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

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text: LDT

text: USA: California

text: Homo sapiens

text: male

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text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX41592150/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: LDT

text: USA: California

text: Homo sapiens

text: male

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text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX41592148/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: LDT

text: USA: California

text: Homo sapiens

text: male

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text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX41592146/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: LDT

text: USA: California

text: Homo sapiens

text: female

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text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX41592145/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: LDT

text: USA: California

text: Homo sapiens

text: male

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text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX41592142/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: LDT

text: USA: California

text: Homo sapiens

text: female

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text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX41592141/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: LDT

text: USA: California

text: Homo sapiens

text: female

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text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX41592139/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: LDT

text: USA: California

text: Homo sapiens

text: female

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX41592138/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: LDT

text: USA: California

text: Homo sapiens

text: female

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX41592137/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: LDT

text: USA: California

text: Homo sapiens

text: male

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text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX41592136/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: LDT

text: USA: California

text: Homo sapiens

text: male

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX41592135/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: LDT

text: USA: California

text: Homo sapiens

text: male

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX41592132/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: LDT

text: USA: California

text: Homo sapiens

text: male

text: Nasal Swabs

text: Severe acute respiratory syndrome coronavirus 2

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX41592130/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: LDT

text: USA: California

text: Homo sapiens

text: male

text: Nasal Swabs

text: baseline surveillance (random sampling)

text: CDC Sars CoV2 Sequencing Baseline Constellation


text: SARS-CoV-2/Human/USA/CA-CDC-QDX41592129/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: LDT

text: USA: California

text: Homo sapiens

text: male

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX41592128/2022

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: LDT

text: USA: California

text: Homo sapiens

text: male

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX41592127/2022

text: CDC-OAMD

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text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: LDT

text: USA: California

text: Homo sapiens

text: female

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX41592125/2022

text: CDC-OAMD

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text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: LDT

text: USA: California

text: Homo sapiens

text: male

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX41592124/2022

text: CDC-OAMD

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text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: LDT

text: USA: California

text: Homo sapiens

text: female

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX41592123/2022

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text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: LDT

text: USA: California

text: Homo sapiens

text: male

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text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX41592122/2022

text: CDC-OAMD

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text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

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text: Nasal Swabs

text: LDT

text: USA: California

text: Homo sapiens

text: male

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX41592121/2022

text: CDC-OAMD

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text: SARS-CoV-2: clinical or host-associated

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text: Homo sapiens

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text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

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text: LDT

text: USA: California

text: Homo sapiens

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text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX41592119/2022

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text: SARS-CoV-2: clinical or host-associated

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text: Nasal Swabs

text: LDT

text: USA: California

text: Homo sapiens

text: male

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text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX41592118/2022

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text: SARS-CoV-2: clinical or host-associated

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text: Nasal Swabs

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text: LDT

text: USA: California

text: Homo sapiens

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text: baseline surveillance (random sampling)


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text: CDC-OAMD

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text: SARS-CoV-2: clinical or host-associated

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text: LDT

text: USA: California

text: Homo sapiens

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text: Homo sapiens

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text: baseline surveillance (random sampling)

text: CDC Sars CoV2 Sequencing Baseline Constellation


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text: Homo sapiens

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text: SARS-CoV-2: clinical or host-associated

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text: Homo sapiens

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text: SARS-CoV-2/Human/USA/CA-CDC-QDX41592107/2022

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text: USA: California

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text: SARS-CoV-2: clinical or host-associated

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text: LDT

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text: Homo sapiens

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text: SARS-CoV-2/Human/USA/CA-CDC-QDX41592105/2022

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characteristic: AGE

characteristic: Animal

text: MIMS.me

characteristic: BioSampleModel

text: MIGS/MIMS/MIMARKS.host-associated

characteristic: Collection date

characteristic: ENA-FIRST-PUBLIC

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text: pda|mekadim@iapg.cas.cz

characteristic: INSDC center alias

text: pda|mekadim@iapg.cas.cz

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characteristic: Library

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characteristic: MELIM

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text: bodily fluid material biome [ENVO:02000019]

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text: NCBI

characteristic: broker name

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text: fecal material [ENVO:00002003]

characteristic: environmental medium

text: Czech Republic: Libechov

characteristic: geographic location

text: Sus scrofa f. domestica

text: 49.75 N 15.5 E

characteristic: latitude and longitude

text: excreta material [ENVO:02000022]

characteristic: local-scale environmental context

characteristic: mother

text: feces metagenome

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characteristic: AGE

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text: MIMS.me

characteristic: BioSampleModel

text: MIGS/MIMS/MIMARKS.host-associated

characteristic: External Id

text: pda|mekadim@iapg.cas.cz

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characteristic: INSDC center name

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text: Sus scrofa f. domestica

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characteristic: organism

text: feces metagenome

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text: pda|mekadim@iapg.cas.cz

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characteristic: AGE

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characteristic: expressing

text: in antibiotic-free Murashige and Skoog medium supplemented with 3 % sucrose (w/v)

text: Solanum lycopersicum

characteristic: organism

characteristic: replicate

text: 24 C

characteristic: temp

text: hairy roots

characteristic: tissue

characteristic: title

text: 100 M estradiol

characteristic: treatment


text: Plant

characteristic: BioSampleModel

characteristic: External Id

text: pda|borisstojilkovic@orcid

text: pda|borisstojilkovic@orcid

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: 2 weeks

text: NCBI

characteristic: broker name

text: tomato

text: Moneymaker

text: GFP

text: Solanum lycopersicum

text: 24 C

text: hairy roots

text: 100 M estradiol


text: Plant

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: pda|borisstojilkovic@orcid

characteristic: INSDC center alias

text: pda|borisstojilkovic@orcid

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: 2 weeks

characteristic: age

text: NCBI

text: tomato

text: Moneymaker

text: NEROSscTPmut

text: Solanum lycopersicum

text: 24 C

text: hairy roots

text: 45-NEROSscTPmut-1-E6_S45_L001_R1_001.fastq.gz

text: 100 M estradiol


text: Plant

text: pda|borisstojilkovic@orcid

text: pda|borisstojilkovic@orcid

text: public

text: 2 weeks

text: NCBI

text: tomato

characteristic: common name

text: Moneymaker

characteristic: cultivar

text: NEROSscTPmut

characteristic: expressing

text: Solanum lycopersicum

characteristic: organism

characteristic: replicate

text: 24 C

characteristic: temp

text: hairy roots

text: 45-NEROSscTPmut-1-E6_S45_L002_R1_001.fastq.gz

text: 100 M estradiol


text: Plant

characteristic: BioSampleModel

characteristic: External Id

text: pda|borisstojilkovic@orcid

text: pda|borisstojilkovic@orcid

characteristic: INSDC center name

text: public

text: 2 weeks

text: NCBI

text: tomato

text: Moneymaker

text: NEROSscTPmut

text: Solanum lycopersicum

text: 24 C

text: hairy roots

characteristic: tissue

text: 45-NEROSscTPmut-1-E6_S45_L003_R1_001.fastq.gz

characteristic: title

text: 100 M estradiol

characteristic: treatment


text: Plant

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: pda|borisstojilkovic@orcid

text: pda|borisstojilkovic@orcid

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: 2 weeks

text: NCBI

characteristic: broker name

text: tomato

text: Moneymaker

text: NEROSscTPmut

text: Solanum lycopersicum

text: 24 C

text: hairy roots

text: 45-NEROSscTPmut-1-E6_S45_L004_R1_001.fastq.gz

text: 100 M estradiol


text: Plant

text: pda|borisstojilkovic@orcid

characteristic: INSDC center alias

text: pda|borisstojilkovic@orcid

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: 2 weeks

characteristic: age

text: NCBI

text: tomato

characteristic: common name

text: Moneymaker

characteristic: cultivar

text: NEROSscTPmut

text: Solanum lycopersicum

text: 24 C

text: hairy roots

text: 46-NEROSscTPmut-2-F6_S46_L001_R1_001.fastq.gz

text: 100 M estradiol


text: Plant

characteristic: BioSampleModel

characteristic: External Id

text: pda|borisstojilkovic@orcid

text: pda|borisstojilkovic@orcid

text: public

text: 2 weeks

text: NCBI

text: tomato

text: Moneymaker

text: NEROSscTPmut

characteristic: expressing

text: Solanum lycopersicum

characteristic: organism

characteristic: replicate

text: 24 C

characteristic: temp

text: hairy roots

text: 46-NEROSscTPmut-2-F6_S46_L002_R1_001.fastq.gz

text: 100 M estradiol


text: Plant

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: pda|borisstojilkovic@orcid

text: pda|borisstojilkovic@orcid

characteristic: INSDC center name

text: public

text: 2 weeks

text: NCBI

text: tomato

text: Moneymaker

text: NEROSscTPmut

text: Solanum lycopersicum

text: 24 C

text: hairy roots

characteristic: tissue

text: 46-NEROSscTPmut-2-F6_S46_L003_R1_001.fastq.gz

characteristic: title

text: 100 M estradiol

characteristic: treatment


text: Plant

text: pda|borisstojilkovic@orcid

characteristic: INSDC center alias

text: pda|borisstojilkovic@orcid

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 2 weeks

text: NCBI

characteristic: broker name

text: tomato

text: Moneymaker

text: NEROSscTPmut

text: Solanum lycopersicum

text: 24 C

text: hairy roots

text: 46-NEROSscTPmut-2-F6_S46_L004_R1_001.fastq.gz

text: 100 M estradiol


text: Plant

characteristic: BioSampleModel

characteristic: External Id

text: pda|borisstojilkovic@orcid

text: pda|borisstojilkovic@orcid

text: public

characteristic: Submitter Id

text: 2 weeks

characteristic: age

text: NCBI

text: tomato

characteristic: common name

text: Moneymaker

characteristic: cultivar

text: NEROSscTPmut

text: Solanum lycopersicum

text: 24 C

text: hairy roots

text: 47-NEROSscTPmut-3-G6_S47_L001_R1_001.fastq.gz

text: 100 M estradiol


text: Plant

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: pda|borisstojilkovic@orcid

text: pda|borisstojilkovic@orcid

text: public

text: 2 weeks

text: NCBI

text: tomato

text: Moneymaker

text: NEROSscTPmut

characteristic: expressing

text: Solanum lycopersicum

characteristic: organism

characteristic: replicate

text: 24 C

characteristic: temp

text: hairy roots

text: 47-NEROSscTPmut-3-G6_S47_L002_R1_001.fastq.gz

text: 100 M estradiol


text: Plant

text: pda|borisstojilkovic@orcid

characteristic: INSDC center alias

text: pda|borisstojilkovic@orcid

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: 2 weeks

text: NCBI

text: tomato

text: Moneymaker

text: NEROSscTPmut

text: Solanum lycopersicum

text: 24 C

text: hairy roots

characteristic: tissue

text: 47-NEROSscTPmut-3-G6_S47_L003_R1_001.fastq.gz

characteristic: title

text: 100 M estradiol

characteristic: treatment


text: Plant

characteristic: BioSampleModel

characteristic: External Id

text: pda|borisstojilkovic@orcid

text: pda|borisstojilkovic@orcid

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 2 weeks

text: NCBI

characteristic: broker name

text: tomato

text: Moneymaker

text: NEROSscTPmut

text: Solanum lycopersicum

text: 24 C

text: hairy roots

text: 47-NEROSscTPmut-3-G6_S47_L004_R1_001.fastq.gz

text: 100 M estradiol


text: Plant

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: pda|borisstojilkovic@orcid

text: pda|borisstojilkovic@orcid

text: public

characteristic: Submitter Id

text: 2 weeks

characteristic: age

text: NCBI

text: tomato

characteristic: common name

text: Moneymaker

characteristic: cultivar

text: NEROSscTPmut

text: Solanum lycopersicum

text: 24 C

text: hairy roots

text: 48-NEROSscTPmut-4-H6_S48_L001_R1_001.fastq.gz

text: 100 M estradiol


text: Plant

text: pda|borisstojilkovic@orcid

characteristic: INSDC center alias

text: pda|borisstojilkovic@orcid

characteristic: INSDC center name

text: public

text: 2 weeks

text: NCBI

text: tomato

text: Moneymaker

text: NEROSscTPmut

characteristic: expressing

text: Solanum lycopersicum

characteristic: organism

characteristic: replicate

text: 24 C

characteristic: temp

text: hairy roots

text: 48-NEROSscTPmut-4-H6_S48_L002_R1_001.fastq.gz

text: 100 M estradiol


text: Plant

characteristic: BioSampleModel

characteristic: External Id

text: pda|borisstojilkovic@orcid

text: pda|borisstojilkovic@orcid

characteristic: INSDC first public

text: public

text: 2 weeks

text: NCBI

text: tomato

text: Moneymaker

text: NEROSscTPmut

text: Solanum lycopersicum

text: 24 C

text: hairy roots

characteristic: tissue

text: 48-NEROSscTPmut-4-H6_S48_L003_R1_001.fastq.gz

characteristic: title

text: 100 M estradiol

characteristic: treatment


text: Plant

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: pda|borisstojilkovic@orcid

text: pda|borisstojilkovic@orcid

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 2 weeks

text: NCBI

characteristic: broker name

text: tomato

text: Moneymaker

text: NEROSscTPmut

text: Solanum lycopersicum

text: 24 C

text: hairy roots

text: 48-NEROSscTPmut-4-H6_S48_L004_R1_001.fastq.gz

text: 100 M estradiol


text: Model organism or animal

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: 36 weks

characteristic: age

text: NCBI

text: feces metagenome

text: replicate = biological replicate 1

text: male

characteristic: sex

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

characteristic: BioSampleModel

text: public

text: 36 weks

text: NCBI

text: feces metagenome

characteristic: organism

text: replicate = biological replicate 2

characteristic: replicate

text: male

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

characteristic: External Id

characteristic: INSDC first public

text: public

text: 36 weks

text: NCBI

text: feces metagenome

text: replicate = biological replicate 3

text: male

text: Fecal pellet

characteristic: tissue

text: feces metagenome


text: Model organism or animal

characteristic: ENA-FIRST-PUBLIC

text: public

text: 36 weks

text: NCBI

text: feces metagenome

text: replicate = biological replicate 4

text: male

text: Fecal pellet

text: feces metagenome

characteristic: title


text: Model organism or animal

characteristic: ENA-LAST-UPDATE

characteristic: INSDC last update

text: public

text: 36 weks

text: NCBI

text: feces metagenome

text: replicate = biological replicate 5

text: male

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 36 weks

text: NCBI

text: feces metagenome

text: replicate = biological replicate 6

text: male

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

characteristic: INSDC center alias

text: public

text: 36 weks

text: NCBI

characteristic: broker name

text: feces metagenome

text: replicate = biological replicate 7

text: male

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: 36 weks

text: NCBI

text: feces metagenome

text: replicate = biological replicate 8

text: male

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

text: public

text: 36 weks

characteristic: age

text: NCBI

text: feces metagenome

text: replicate = biological replicate 9

text: male

characteristic: sex

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

characteristic: BioSampleModel

text: public

text: 36 weks

text: NCBI

text: feces metagenome

characteristic: organism

text: replicate = biological replicate 10

text: male

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

characteristic: External Id

text: public

text: 36 weks

text: NCBI

text: feces metagenome

text: replicate = biological replicate 11

characteristic: replicate

text: male

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

characteristic: INSDC first public

text: public

text: 36 weks

text: NCBI

text: feces metagenome

text: replicate = biological replicate 12

text: male

text: Fecal pellet

characteristic: tissue

text: feces metagenome


text: Model organism or animal

characteristic: ENA-FIRST-PUBLIC

text: public

text: 36 weks

text: NCBI

text: feces metagenome

text: replicate = biological replicate 13

text: male

text: Fecal pellet

text: feces metagenome

characteristic: title


text: Model organism or animal

characteristic: ENA-LAST-UPDATE

characteristic: INSDC last update

text: public

text: 36 weks

text: NCBI

text: feces metagenome

text: replicate = biological replicate 14

text: male

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 36 weks

text: NCBI

text: feces metagenome

text: replicate = biological replicate 15

text: male

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

characteristic: INSDC center alias

text: public

text: 36 weks

text: NCBI

characteristic: broker name

text: feces metagenome

text: replicate = biological replicate 16

text: male

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: 36 weks

text: NCBI

text: feces metagenome

text: replicate = biological replicate 17

text: male

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

text: public

text: 36 weks

characteristic: age

text: NCBI

text: feces metagenome

text: replicate = biological replicate 18

text: male

characteristic: sex

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

characteristic: BioSampleModel

text: public

text: 36 weks

text: NCBI

text: feces metagenome

characteristic: organism

text: replicate = biological replicate 19

text: male

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

characteristic: External Id

text: public

text: 36 weks

text: NCBI

text: feces metagenome

text: replicate = biological replicate 20

characteristic: replicate

text: male

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

characteristic: INSDC first public

text: public

text: 36 weks

text: NCBI

text: feces metagenome

text: replicate = biological replicate 21

text: male

text: Fecal pellet

characteristic: tissue

text: feces metagenome


text: Model organism or animal

characteristic: ENA-FIRST-PUBLIC

text: public

text: 36 weks

text: NCBI

text: feces metagenome

text: replicate = biological replicate 22

text: male

text: Fecal pellet

text: feces metagenome

characteristic: title


text: Model organism or animal

characteristic: ENA-LAST-UPDATE

characteristic: INSDC last update

text: public

text: 36 weks

text: NCBI

text: feces metagenome

text: replicate = biological replicate 23

text: male

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 36 weks

text: NCBI

text: feces metagenome

text: replicate = biological replicate 24

text: male

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

characteristic: INSDC center alias

text: public

text: 36 weks

text: NCBI

characteristic: broker name

text: feces metagenome

text: replicate = biological replicate 25

text: male

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: 36 weks

text: NCBI

text: feces metagenome

text: replicate = biological replicate 26

text: male

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

text: public

text: 36 weks

characteristic: age

text: NCBI

text: feces metagenome

text: replicate = biological replicate 27

text: male

characteristic: sex

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

characteristic: BioSampleModel

text: public

text: 36 weks

text: NCBI

text: feces metagenome

characteristic: organism

text: replicate = biological replicate 28

text: male

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

characteristic: External Id

text: public

text: 36 weks

text: NCBI

text: feces metagenome

text: replicate = biological replicate 29

characteristic: replicate

text: male

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

characteristic: INSDC first public

text: public

text: 36 weks

text: NCBI

text: feces metagenome

text: replicate = biological replicate 30

text: male

text: Fecal pellet

characteristic: tissue

text: feces metagenome


text: Model organism or animal

characteristic: ENA-FIRST-PUBLIC

text: public

text: 36 weks

text: NCBI

text: feces metagenome

text: replicate = biological replicate 31

text: male

text: Fecal pellet

text: feces metagenome

characteristic: title


text: Model organism or animal

characteristic: ENA-LAST-UPDATE

characteristic: INSDC last update

text: public

text: 36 weks

text: NCBI

text: feces metagenome

text: replicate = biological replicate 32

text: male

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 36 weks

text: NCBI

text: feces metagenome

text: replicate = biological replicate 33

text: male

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

characteristic: INSDC center alias

text: public

text: 36 weks

text: NCBI

characteristic: broker name

text: feces metagenome

text: replicate = biological replicate 34

text: male

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: 36 weks

text: NCBI

text: feces metagenome

text: replicate = biological replicate 35

text: male

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

text: public

text: 36 weks

characteristic: age

text: NCBI

text: feces metagenome

text: replicate = biological replicate 36

text: male

characteristic: sex

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

characteristic: BioSampleModel

text: public

text: 36 weks

text: NCBI

text: feces metagenome

characteristic: organism

text: replicate = biological replicate 37

text: male

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

characteristic: External Id

text: public

text: 36 weks

text: NCBI

text: feces metagenome

text: replicate = biological replicate 38

characteristic: replicate

text: male

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

characteristic: INSDC first public

text: public

text: 36 weks

text: NCBI

text: feces metagenome

text: replicate = biological replicate 39

text: male

text: Fecal pellet

characteristic: tissue

text: feces metagenome


text: Model organism or animal

characteristic: ENA-FIRST-PUBLIC

text: public

text: 36 weks

text: NCBI

text: feces metagenome

text: replicate = biological replicate 40

text: male

text: Fecal pellet

text: feces metagenome

characteristic: title


text: Model organism or animal

characteristic: ENA-LAST-UPDATE

characteristic: INSDC last update

text: public

text: 36 weks

text: NCBI

text: feces metagenome

text: replicate = biological replicate 41

text: male

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

text: public

characteristic: INSDC status

characteristic: SRA accession

text: 36 weks

text: NCBI

text: feces metagenome

text: replicate = biological replicate 42

text: male

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

characteristic: INSDC center alias

text: public

text: 36 weks

text: NCBI

characteristic: broker name

text: feces metagenome

text: replicate = biological replicate 43

text: male

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: 36 weks

text: NCBI

text: feces metagenome

text: replicate = biological replicate 44

text: male

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

text: public

text: 36 weks

characteristic: age

text: NCBI

text: feces metagenome

text: replicate = biological replicate 45

text: male

characteristic: sex

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

characteristic: BioSampleModel

text: public

text: 36 weks

text: NCBI

text: feces metagenome

characteristic: organism

text: replicate = biological replicate 46

text: male

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

characteristic: External Id

text: public

text: 36 weks

text: NCBI

text: feces metagenome

text: replicate = biological replicate 47

characteristic: replicate

text: male

text: Fecal pellet

text: feces metagenome


text: Model organism or animal

characteristic: INSDC first public

text: public

text: 36 weks

text: NCBI

text: feces metagenome

text: replicate = biological replicate 48

text: male

text: Fecal pellet

characteristic: tissue

text: feces metagenome


text: Pathogen.cl

characteristic: ENA-FIRST-PUBLIC

text: public

text: NCBI

text: National Institute of Hygiene and Epidemiology

text: Viet Nam

text: Homo sapiens

characteristic: host

text: bloodstream infections

text: blood

text: 20.9998 N 105.8407 E

text: Staphylococcus aureus

characteristic: strain

text: Pathogen: clinical or host-associated sample from Staphylococcus aureus

characteristic: title


Hi-C

text: Model organism or animal

characteristic: ENA-LAST-UPDATE

text: pda|jmei@mail.hzau.edu.cn

text: pda|jmei@mail.hzau.edu.cn

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

text: Hi-C

text: NCBI

text: adult

characteristic: isolate

text: Tachysurus vachellii

text: female

text: blood

text: Hi-C of pelteobagrus vachellii: adult XX female


text: Microbe, viral or environmental

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: Tyrone Pitt HPA

text: NCBI

characteristic: broker name

text: Tyrone Pitt HPA

text: not provided

text: Tyrone Pitt HPA

text: Burkholderia thailandensis


text: MIGS.ba

characteristic: BioSampleModel

characteristic: External Id

text: pda|kalshaib@kau.edu.sa

text: pda|kalshaib@kau.edu.sa

text: public

text: NCBI

text: 10 cm

characteristic: depth

text: Saudi Arabia

text: Mineral salt medium

text: soil polluted with engine oil

text: Cronobacter sakazakii

characteristic: organism

text: Cronobacter sakazakii


text: MIGS.ba

characteristic: ENA-FIRST-PUBLIC

text: pda|kalshaib@kau.edu.sa

text: pda|kalshaib@kau.edu.sa

characteristic: INSDC first public

text: public

text: NCBI

text: 10 cm

text: Saudi Arabia

text: Mineral salt medium

text: soil polluted with engine oil

text: Enterobacter hormaechei

text: Enterobacter hormaechei


text: MIGS.ba

text: pda|kalshaib@kau.edu.sa

text: pda|kalshaib@kau.edu.sa

text: public

text: NCBI

text: 8 Cm

text: Saudi Arabia

text: Mineral salt medium

text: soil polluted with engine oil

text: Klebsiella pneumoniae

characteristic: strain

text: Klebsiella pneumoniae


text: Model organism or animal

text: public

text: NCBI

text: C. elegans treated by ethanol, sample 3

text: Caenorhabditis elegans

text: whole organism

characteristic: tissue

text: Caenorhabditis elegans

characteristic: title


text: Model organism or animal

characteristic: ENA-LAST-UPDATE

characteristic: INSDC last update

text: public

text: NCBI

text: C. elegans treated by ethanol, sample 2

text: Caenorhabditis elegans

text: whole organism

text: Caenorhabditis elegans


text: Model organism or animal

text: public

characteristic: INSDC status

characteristic: SRA accession

text: NCBI

text: C. elegans treated by ethanol, sample 1

text: Caenorhabditis elegans

text: whole organism

text: Caenorhabditis elegans


text: Model organism or animal

characteristic: INSDC center alias

text: public

text: NCBI

text: C. elegans control, sample 3

characteristic: isolate

text: Caenorhabditis elegans

text: whole organism

text: Caenorhabditis elegans


text: Model organism or animal

characteristic: INSDC center name

text: public

characteristic: Submitter Id

text: NCBI

text: C. elegans control, sample 2

text: Caenorhabditis elegans

text: whole organism

text: Caenorhabditis elegans


text: Model organism or animal

characteristic: BioSampleModel

text: public

text: NCBI

characteristic: broker name

text: C. elegans control, sample 1

text: Caenorhabditis elegans

text: whole organism

text: Caenorhabditis elegans


text: Metagenome or environmental

characteristic: External Id

text: pda|nicvaliente

text: pda|nicvaliente

text: public

text: NCBI

characteristic: description

text: Spain: Toledo

text: Mus musculus

characteristic: host

text: gut metagenome


text: Metagenome or environmental

characteristic: ENA-FIRST-PUBLIC

text: pda|nicvaliente

text: pda|nicvaliente

characteristic: INSDC first public

text: public

text: NCBI

text: WT

text: Spain: Toledo

text: Mus musculus

text: gut metagenome

characteristic: organism


name: Community changes in osmoprotectants mediated anaerobic digestion system

text: Metagenome or environmental

text: pda|seuyanyixin@gmail.com

text: pda|seuyanyixin@gmail.com

text: public

text: NCBI

text: Denmark:lyngby

text: digestate of betaine mediated anaerobic digestion system

text: 55.47 N 12.31 E

text: anaerobic digester metagenome

text: anaerobic digester metagenome

characteristic: title


text: SARS-CoV-2: clinical or host-associated

characteristic: ENA-LAST-UPDATE

text: public

text: NCBI

text: CENTRACARE LABORATORY SERVICES

text: USA: Minnesota

text: Homo sapiens

text: oropharynx

text: Severe acute respiratory syndrome coronavirus 2

text: baseline surveillance (random sampling)

text: Minnesota Department of Health, Public Health Laboratory


text: SARS-CoV-2: clinical or host-associated

characteristic: INSDC last update

text: public

text: NCBI

text: CENTER FOR AMERICAN INDIAN RESOURCES

text: USA: Minnesota

text: Homo sapiens

text: nares


text: SARS-CoV-2: clinical or host-associated

text: public

characteristic: INSDC status

text: NCBI

text: ESSENTIA HEALTH-ADA

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: SARS-CoV-2: clinical or host-associated

text: public

characteristic: SRA accession

text: NCBI

text: GLENCOE REGIONAL HEALTH SERVICE

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: SARS-CoV-2: clinical or host-associated

characteristic: INSDC center alias

text: public

text: NCBI

text: VALLEY MEDICAL & WELLNESS

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: SARS-CoV-2: clinical or host-associated

text: public

text: NCBI

text: CARRIS HEALTH - RICE MEMORIAL HOSPITAL

text: USA: Minnesota

text: Homo sapiens

characteristic: isolate

text: nasopharynx

text: baseline surveillance (random sampling)


text: SARS-CoV-2: clinical or host-associated

characteristic: INSDC center name

text: public

text: NCBI

text: CARRIS HEALTH - RICE MEMORIAL HOSPITAL

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx


text: SARS-CoV-2: clinical or host-associated

text: public

characteristic: Submitter Id

text: NCBI

text: HUTCHINSON HEALTH HOSPITAL

text: USA: Minnesota

text: Homo sapiens

text: nares

text: baseline surveillance (random sampling)


text: SARS-CoV-2: clinical or host-associated

characteristic: BioSampleModel

text: public

text: NCBI

text: LAKE REGION HEALTHCARE

text: USA: Minnesota

text: Homo sapiens

text: oropharynx

text: baseline surveillance (random sampling)


text: SARS-CoV-2: clinical or host-associated

text: public

text: NCBI

characteristic: broker name

text: AVERA TYLER HOSPITAL

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx


text: SARS-CoV-2: clinical or host-associated

characteristic: External Id

text: public

text: NCBI

text: ALLINA HEALTH LABORATORY - ABBOTT NORTHWESTERN

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: SARS-CoV-2: clinical or host-associated

text: public

text: NCBI

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx


text: SARS-CoV-2: clinical or host-associated

text: public

text: NCBI

text: AVERA TYLER HOSPITAL

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: SARS-CoV-2: clinical or host-associated

text: public

text: NCBI

text: ST CLOUD VA HEALTH CARE SYSTEM

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx

text: baseline surveillance (random sampling)


text: SARS-CoV-2: clinical or host-associated

text: public

text: NCBI

text: INFINITY BIOLOGIX

text: USA: Minnesota

text: Homo sapiens

text: saliva

text: baseline surveillance (random sampling)


text: SARS-CoV-2: clinical or host-associated

text: public

text: NCBI

text: CENTRACARE LABORATORY SERVICES

text: USA: Minnesota

text: Homo sapiens

text: nasopharynx


text: Model organism or animal

text: public

text: 55 weeks

characteristic: age

text: not collected

characteristic: breed

text: NCBI

text: house mouse

characteristic: common name

text: postmenopause

text: not collected

characteristic: ecotype

text: wild-type

characteristic: genotype

text: not collected

text: Mus musculus

text: female

characteristic: sex

characteristic: strain

text: fecal samples

characteristic: tissue

text: Mus musculus


text: MIGS.ba

text: MIGS/MIMS/MIMARKS.human-gut

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: NCBI

text: CdtR gene knocked out in R20291 clone 10.3

characteristic: description

text: USA: Chicago

text: PMID: 24084491

text: Clostridioides difficile

characteristic: organism

characteristic: title


text: MIGS.ba

characteristic: BioSampleModel

text: MIGS/MIMS/MIMARKS.human-gut

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: NCBI

characteristic: broker name

text: CdtR gene knocked out in R20291 clone 8.1

text: USA: Chicago

text: PMID: 24084491

text: Clostridioides difficile


text: MIGS.ba

text: MIGS/MIMS/MIMARKS.human-gut

text: public

text: NCBI

text: CdtR gene with premature stop codon in R20291 clone 4.2

text: USA: Chicago

text: PMID: 24084491

text: Clostridioides difficile

characteristic: strain


text: MIGS.ba

text: MIGS/MIMS/MIMARKS.human-gut

text: public

text: NCBI

text: CdtR gene with premature stop codon in R20291 clone 8

text: USA: Chicago

text: PMID: 24084491

text: Clostridioides difficile


text: MIGS.ba

text: MIGS/MIMS/MIMARKS.human-gut

text: public

text: NCBI

text: CdtR gene with 69bp deletion (as in ST1-75) in R20291 clone 6.1

text: USA: Chicago

text: PMID: 24084491

text: Clostridioides difficile


text: MIGS.ba

text: MIGS/MIMS/MIMARKS.human-gut

text: public

text: NCBI

text: CdtR gene with 69bp deletion (as in ST1-75) in R20291 clone 8.1

text: USA: Chicago

text: PMID: 24084491

text: Clostridioides difficile


text: MIGS.ba

text: MIGS/MIMS/MIMARKS.human-gut

text: public

text: NCBI

text: Lysogeny R20921 with prophage phiCD75-2

text: USA: Chicago

text: PMID: 24084491

text: Clostridioides difficile

text: Lysogeny R20921 with prophage phiCD75-2

text: Lysogeny R20921 with prophage phiCD75-2


text: MIGS.ba

text: MIGS/MIMS/MIMARKS.human-gut

text: public

text: NCBI

text: Lysogeny R20921 with prophage phiCD75-2 and phiCD75-3

text: USA: Chicago

text: PMID: 24084491

text: Clostridioides difficile


text: MIGS.ba

text: MIGS/MIMS/MIMARKS.human-gut

text: public

text: NCBI

text: Lysogeny R20921 with prophage phiCD75-3

text: USA: Chicago

text: PMID: 24084491

text: Clostridioides difficile

text: Lysogeny R20921 with prophage phiCD75-3

text: Lysogeny R20921 with prophage phiCD75-3