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text: pda|emily.smith@theiagen.com

text: pda|emily.smith@theiagen.com

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text: SARS-CoV-2: clinical or host-associated

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text: pda|emily.smith@theiagen.com

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text: SARS-CoV-2: clinical or host-associated

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text: pda|emily.smith@theiagen.com

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text: SARS-CoV-2: clinical or host-associated

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text: pda|emily.smith@theiagen.com

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text: pda|emily.smith@theiagen.com

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text: pda|emily.smith@theiagen.com

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text: pda|emily.smith@theiagen.com

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text: pda|emily.smith@theiagen.com

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text: pda|emily.smith@theiagen.com

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characteristic: SRA accession

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text: P5 (Axenic) Light 5 hr Rep A

text: USA: Washington

text: freshwater growth medium

text: 47.6519 N 122.3113 W

text: mixed culture metagenome

text: P5 (Axenic) Light 5 hr Rep A


text: Metagenome or environmental

text: pda|tbiondi

text: pda|tbiondi

text: public

characteristic: Submitter Id

text: NCBI

text: P5 (Axenic) Light 5 hr Rep B

text: USA: Washington

text: freshwater growth medium

text: 47.6519 N 122.3113 W

text: mixed culture metagenome

text: P5 (Axenic) Light 5 hr Rep B


text: Metagenome or environmental

text: pda|tbiondi

text: pda|tbiondi

text: public

text: NCBI

characteristic: broker name

text: P5 (Axenic) Dark 11 hr Rep A

text: USA: Washington

text: freshwater growth medium

text: 47.6519 N 122.3113 W

text: mixed culture metagenome

text: P5 (Axenic) Dark 11 hr Rep A


text: Metagenome or environmental

text: pda|tbiondi

text: pda|tbiondi

text: public

text: NCBI

text: P5 (Axenic) Dark 11 hr Rep B

text: USA: Washington

text: freshwater growth medium

text: 47.6519 N 122.3113 W

text: mixed culture metagenome

characteristic: organism

text: P5 (Axenic) Dark 11 hr Rep B


text: Metagenome or environmental

text: pda|tbiondi

text: pda|tbiondi

text: public

text: NCBI

text: P5 (Axenic) Dark 2 hr Rep A

text: USA: Washington

text: freshwater growth medium

text: 47.6519 N 122.3113 W

text: mixed culture metagenome

text: P5 (Axenic) Dark 2 hr Rep A

characteristic: title


text: Metagenome or environmental

text: pda|tbiondi

text: pda|tbiondi

text: public

text: NCBI

text: P5 (Axenic) Dark 2 hr Rep B

text: USA: Washington

text: freshwater growth medium

text: 47.6519 N 122.3113 W

text: mixed culture metagenome

text: P5 (Axenic) Dark 2 hr Rep B


text: Metagenome or environmental

text: pda|tbiondi

text: pda|tbiondi

text: public

text: NCBI

text: P5 (Axenic) Dark 8 hr Rep A

text: USA: Washington

text: freshwater growth medium

text: 47.6519 N 122.3113 W

text: mixed culture metagenome

text: P5 (Axenic) Dark 8 hr Rep A


text: Metagenome or environmental

text: pda|tbiondi

text: pda|tbiondi

text: public

text: NCBI

text: P5 (Axenic) Dark 8 hr Rep B

text: USA: Washington

text: freshwater growth medium

text: 47.6519 N 122.3113 W

text: mixed culture metagenome

text: P5 (Axenic) Dark 8 hr Rep B


text: Metagenome or environmental

text: pda|tbiondi

text: pda|tbiondi

text: public

text: NCBI

text: P3 (Non-axenic) Dark 11 hrs Rep A

text: USA: Washington

text: freshwater growth medium

text: 47.6519 N 122.3113 W

text: mixed culture metagenome

text: P3 (Non-axenic) Dark 11 hrs Rep A


text: Metagenome or environmental

text: pda|tbiondi

text: pda|tbiondi

text: public

text: NCBI

text: P3 (Non-axenic) Dark 11 hrs Rep B

text: USA: Washington

text: freshwater growth medium

text: 47.6519 N 122.3113 W

text: mixed culture metagenome

text: P3 (Non-axenic) Dark 11 hrs Rep B


text: Metagenome or environmental

text: pda|tbiondi

text: pda|tbiondi

text: public

text: NCBI

text: P3 (Non-axenic) Dark 2 hrs Rep A

text: USA: Washington

text: freshwater growth medium

text: 47.6519 N 122.3113 W

text: mixed culture metagenome

text: P3 (Non-axenic) Dark 2 hrs Rep A


text: Metagenome or environmental

text: pda|tbiondi

text: pda|tbiondi

text: public

text: NCBI

text: P3 (Non-axenic) Dark 2 hrs Rep B

text: USA: Washington

text: freshwater growth medium

text: 47.6519 N 122.3113 W

text: mixed culture metagenome

text: P3 (Non-axenic) Dark 2 hrs Rep B


text: Metagenome or environmental

text: pda|tbiondi

text: pda|tbiondi

text: public

text: NCBI

text: P3 (Non-axenic) Dark 8 hrs Rep A

text: USA: Washington

text: freshwater growth medium

text: 47.6519 N 122.3113 W

text: mixed culture metagenome

text: P3 (Non-axenic) Dark 8 hrs Rep A


text: Metagenome or environmental

text: pda|tbiondi

text: pda|tbiondi

text: public

text: NCBI

text: P3 (Non-axenic) Dark 8 hrs Rep B

text: USA: Washington

text: freshwater growth medium

text: 47.6519 N 122.3113 W

text: mixed culture metagenome

text: P3 (Non-axenic) Dark 8 hrs Rep B


text: Metagenome or environmental

text: pda|tbiondi

text: pda|tbiondi

text: public

text: NCBI

text: P3 (Non-axenic) Light 0.5 hrs Rep A

text: USA: Washington

text: freshwater growth medium

text: 47.6519 N 122.3113 W

text: mixed culture metagenome

text: P3 (Non-axenic) Light 0.5 hrs Rep A


text: Metagenome or environmental

text: pda|tbiondi

text: pda|tbiondi

text: public

text: NCBI

text: P3 (Non-axenic) Light 0.5 hrs Rep B

text: USA: Washington

text: freshwater growth medium

text: 47.6519 N 122.3113 W

text: mixed culture metagenome

text: P3 (Non-axenic) Light 0.5 hrs Rep B


text: Metagenome or environmental

text: pda|tbiondi

text: pda|tbiondi

text: public

text: NCBI

text: P3 (Non-axenic) Light 10 hrs Rep A

text: USA: Washington

text: freshwater growth medium

text: 47.6519 N 122.3113 W

text: mixed culture metagenome

text: P3 (Non-axenic) Light 10 hrs Rep A


text: Metagenome or environmental

text: pda|tbiondi

text: pda|tbiondi

text: public

text: NCBI

text: P3 (Non-axenic) Light 10 hrs Rep B

text: USA: Washington

text: freshwater growth medium

text: 47.6519 N 122.3113 W

text: mixed culture metagenome

text: P3 (Non-axenic) Light 10 hrs Rep B


text: Metagenome or environmental

text: pda|tbiondi

text: pda|tbiondi

text: public

text: NCBI

text: P3 (Non-axenic) Light 5 hrs Rep A

text: USA: Washington

text: freshwater growth medium

text: 47.6519 N 122.3113 W

text: mixed culture metagenome

text: P3 (Non-axenic) Light 5 hrs Rep A


text: Metagenome or environmental

text: pda|tbiondi

text: pda|tbiondi

text: public

text: NCBI

text: P3 (Non-axenic) Light 5 hrs Rep B

text: USA: Washington

text: freshwater growth medium

text: 47.6519 N 122.3113 W

text: mixed culture metagenome

text: P3 (Non-axenic) Light 5 hrs Rep B


text: Metagenome or environmental

text: public

text: NCBI

text: Mexico: Cueva de Villa Luz

text: Cave biofilm

text: 17.4425 N 92.7758 W

text: biofilm metagenome

text: Snottite sample 4 VL13-4

text: biofilm metagenome


text: Metagenome or environmental

text: public

text: NCBI

text: Mexico: Cueva de Villa Luz

text: Cave biofilm

text: 17.4425 N 92.7758 W

text: biofilm metagenome

text: Snottite sample 1 VL13-1

text: biofilm metagenome


text: MIMARKS.survey

text: MIGS/MIMS/MIMARKS.human-oral

text: public

text: NCBI

text: human oral microbiome

text: oral microbiome

text: India

text: Homo sapiens

characteristic: host

text: human oral metagenome

text: Tobacco chewers


text: MIGS/MIMS/MIMARKS.host-associated

text: MIGS.vi

text: public

text: NCBI

text: Canada: Alberta

text: Cervus canadensis

characteristic: isolate

text: small intestine tissue

text: Deer atadenovirus A

text: Deer atadenovirus A


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: CRP

characteristic: HighestCRP

text: pda|hjmharmsen

text: pda|hjmharmsen

text: public

characteristic: Number of patient sample

characteristic: age

text: NCBI

characteristic: crp

characteristic: description

text: ICU hospital

text: Ventilated patients

text: Sputum

text: Netherlands

characteristic: highestcrp

text: Homo sapiens

text: 53.2194 N 6.5665 E

text: human gut metagenome

text: sputum bacteria


text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

text: nd

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: nd

text: pda|hjmharmsen

characteristic: INSDC center alias

text: pda|hjmharmsen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: NCBI

text: nd

text: ICU hospital

text: Ventilated patients

text: Sputum

text: Netherlands

text: nd

text: Homo sapiens

text: 53.2194 N 6.5665 E

text: human gut metagenome

text: sputum bacteria


text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

text: nd

text: nd

text: pda|hjmharmsen

text: pda|hjmharmsen

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: nd

text: NCBI

characteristic: broker name

text: nd

text: ICU hospital

text: Ventilated patients

text: Sputum

text: Netherlands

text: nd

text: Homo sapiens

characteristic: host

text: 53.2194 N 6.5665 E

text: human gut metagenome

characteristic: organism

text: sputum bacteria

characteristic: title


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: CRP

characteristic: HighestCRP

text: pda|hjmharmsen

text: pda|hjmharmsen

text: public

characteristic: Number of patient sample

characteristic: age

text: NCBI

characteristic: crp

text: ICU hospital

text: Ventilated patients

text: Sputum

text: Netherlands

text: Homo sapiens

text: 53.2194 N 6.5665 E

text: human gut metagenome

text: sputum fungi


text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

text: nd

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: nd

text: pda|hjmharmsen

characteristic: INSDC center alias

text: pda|hjmharmsen

text: public

text: NCBI

text: nd

characteristic: description

text: ICU hospital

text: Ventilated patients

text: Sputum

text: Netherlands

text: nd

characteristic: highestcrp

text: Homo sapiens

text: 53.2194 N 6.5665 E

text: human gut metagenome

text: sputum fungi


text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

text: nd

text: nd

text: pda|hjmharmsen

text: pda|hjmharmsen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: nd

text: NCBI

text: nd

text: ICU hospital

text: Ventilated patients

text: Sputum

text: Netherlands

text: nd

text: Homo sapiens

text: 53.2194 N 6.5665 E

text: human gut metagenome

text: sputum fungi


text: Pathogen.cl

characteristic: BioSampleModel

text: pda|christine.foxx@usda.gov

text: pda|christine.foxx@usda.gov

text: public

text: NCBI

characteristic: broker name

text: University of Wisconsin Veterinary Diagnostic Laboratory, Madison, WI

text: USA: WI

text: goat

characteristic: host

text: Not collected

text: Not collected

text: Culture

characteristic: isolate

text: Not collected

text: Not collected

text: Campylobacter coli

characteristic: organism

text: Campylobacter coli

characteristic: title


text: Pathogen.cl

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: pda|christine.foxx@usda.gov

text: pda|christine.foxx@usda.gov

text: public

text: NCBI

text: USA: WI

text: pig

text: Not collected

text: Not collected

text: Culture

text: Not collected

text: Not collected

text: Campylobacter coli

text: Campylobacter coli


text: Metagenome or environmental

characteristic: External Id

text: pda|lucaszhaoxiang@gmail.com

characteristic: INSDC center alias

text: pda|lucaszhaoxiang@gmail.com

text: public

text: NCBI

text: China:Guangzhou

text: wildlife

text: Wild animal Forest Park

text: 21.67 N 110.92 E

text: feces metagenome


text: Pathogen.cl

text: pda|christine.foxx@usda.gov

text: pda|christine.foxx@usda.gov

text: public

text: NCBI

characteristic: description

text: USA: WI

text: cow

text: Not collected

text: Not collected

text: Culture

text: Not collected

text: Not collected

text: Campylobacter fetus

text: Campylobacter fetus


text: Pathogen.cl

text: pda|christine.foxx@usda.gov

text: pda|christine.foxx@usda.gov

characteristic: INSDC center name

text: public

text: NCBI

text: USA: WI

text: sheep

text: Not collected

text: Not collected

text: Culture

text: Not collected

text: Not collected

text: Campylobacter jejuni

text: Campylobacter jejuni


text: Pathogen.env

characteristic: INSDC first public

text: public

text: Dudley Lab

characteristic: Lab

text: NCBI

text: University of Puerto Rico Aguadilla-NARMS

text: USA:PR

text: Turkey

text: Poultry

text: Escherichia coli

text: GenomeTrakr; LFFM-FY3

text: Pennsylvania State University|Dudley Lab

text: food

characteristic: strain

text: Escherichia coli


text: Pathogen.env

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Dudley Lab

characteristic: SRA accession

text: NCBI

text: USA:PR

text: Chicken

text: Poultry

text: Escherichia coli

text: GenomeTrakr; LFFM-FY3

text: food

text: Escherichia coli


text: Pathogen.env

characteristic: BioSampleModel

text: public

text: Dudley Lab

characteristic: Submitter Id

text: NCBI

characteristic: broker name

text: USA:PR

text: Pig

text: Pork

text: Escherichia coli

text: GenomeTrakr; LFFM-FY3

text: food

text: Escherichia coli


text: SARS-CoV-2: clinical or host-associated

text: pda|emily.smith@theiagen.com

text: pda|emily.smith@theiagen.com

text: public

text: NCBI

text: Ventura CHD

text: USA: California

text: Homo sapiens

characteristic: host

text: SARS-CoV-2/Human/USA/CA-CDPH-6000011368/2022

characteristic: isolate

text: clinical

characteristic: organism

text: Baseline surveillance