text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Shigella sonnei

text: None detected

text: Shigella sonnei

text: Shigella sonnei serovar Shigella sonnei 1747309


status: PUBLIC

characteristic: External Id

text: Gastrointestinal Bacteria Reference Unit, Public Health England

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: PHE

tag: attribute

text: United Kingdom: United Kingdom

text: Homo sapiens

characteristic: host

text: Not available

text: human

text: Escherichia coli

characteristic: organism

text: Morganella morganii subsp. morganii KT

text: NOVEL alleles. cannot determine closest ST (DLV)

text: Escherichia coli

characteristic: serovar

characteristic: strain

text: Escherichia coli serovar Escherichia coli 1747637

characteristic: title


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1747595


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1747628


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1747554


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1747616


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1747580


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1747597


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia albertii

text: None detected

text: Escherichia albertii

text: Escherichia albertii serovar Escherichia albertii 1742574


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1747552


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Shigella sonnei

text: None detected

text: Shigella sonnei

text: Shigella sonnei serovar Shigella sonnei 1747333


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1746693


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Shigella sonnei

text: None detected

text: Shigella sonnei

text: Shigella sonnei serovar Shigella sonnei 1747375


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1746695


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1747579


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Shigella sonnei

text: None detected

text: Shigella sonnei

text: Shigella sonnei serovar Shigella sonnei 1747605


text: Gastrointestinal Bacteria Reference Unit, Public Health England

text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1747584


text: live

text: Pathogen.env

text: PHE

text: United Kingdom: United Kingdom

text: Homo sapiens

text: Not available

text: human

text: Escherichia coli

text: None detected

text: Escherichia coli

text: Escherichia coli serovar Escherichia coli 1747556


Mycobacterium phage Baudelaire

text: Viral

characteristic: BioSampleModel

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC center alias

text: public

text: Mycobacterium phage Baudelaire

characteristic: Submitter Id

text: NCBI

characteristic: broker name

text: USA: Orono, ME

text: Mycobacteroides chelonae ATCC-35752

text: Katelyn Amero

characteristic: isolate

text: soil

text: Mycobacterium phage Baudelaire

text: Mycobacterium phage Baudelaire


Mycobacterium phage Zolita

text: Viral

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Mycobacterium phage Zolita

text: NCBI

text: USA: Providence, RI

text: Mycolicibacterium smegmatis mc155

text: Samantha Otalvaro

text: soil

text: Mycobacterium phage Zolita

text: Mycobacterium phage Zolita


text: Microbe, viral or environmental

text: public

characteristic: INSDC status

characteristic: SRA accession

text: NCBI

text: baker's yeast

characteristic: common name

text: USA: Atlanta

text: Lab strain

text: Saccharomyces cerevisiae

text: Monoclonal colony

text: Saccharomyces cerevisiae


text: SARS-CoV-2: clinical or host-associated

text: pda|emily.smith@theiagen.com

text: pda|emily.smith@theiagen.com

text: public

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text: Kaiser Regional-72 Fresno

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text: Homo sapiens

characteristic: host

text: SARS-CoV-2/Human/USA/CA-CDPH-6000013316/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: Baseline surveillance


text: SARS-CoV-2: clinical or host-associated

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text: pda|emily.smith@theiagen.com

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text: SARS-CoV-2/Human/USA/CA-CDPH-6000013317/2022

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characteristic: title


text: SARS-CoV-2: clinical or host-associated

characteristic: BioSampleModel

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text: pda|emily.smith@theiagen.com

text: public

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text: SARS-CoV-2/Human/USA/CA-CDPH-6000013319/2022

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text: public

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text: pda|emily.smith@theiagen.com

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text: SARS-CoV-2/Human/USA/CA-CDPH-6000013327/2022

characteristic: isolate

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text: SARS-CoV-2: clinical or host-associated

characteristic: External Id

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text: public

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text: clinical

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text: SARS-CoV-2: clinical or host-associated

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characteristic: INSDC last update

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text: clinical

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text: SARS-CoV-2: clinical or host-associated

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text: SARS-CoV-2: clinical or host-associated

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characteristic: SRA accession

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text: USA: California

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text: clinical

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text: SARS-CoV-2: clinical or host-associated

text: pda|emily.smith@theiagen.com

text: pda|emily.smith@theiagen.com

text: public

text: NCBI

text: Kaiser Regional-37 Redwood Cit

text: USA: California

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text: clinical

text: Baseline surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|emily.smith@theiagen.com

text: pda|emily.smith@theiagen.com

text: public

text: NCBI

text: Kaiser Regional-60 S. Sacramen

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000013336/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Baseline surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|emily.smith@theiagen.com

text: pda|emily.smith@theiagen.com

text: public

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text: USA: California

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text: clinical

text: Baseline surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|emily.smith@theiagen.com

text: pda|emily.smith@theiagen.com

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text: Kaiser Regional-60 S. Sacramen

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text: clinical

text: Baseline surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|emily.smith@theiagen.com

text: pda|emily.smith@theiagen.com

text: public

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text: Kaiser Regional-63 S. Teresa M

text: USA: California

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text: clinical

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text: SARS-CoV-2: clinical or host-associated

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text: pda|emily.smith@theiagen.com

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text: SARS-CoV-2: clinical or host-associated

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text: pda|emily.smith@theiagen.com

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text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000013504/2022

text: clinical

text: Baseline surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|emily.smith@theiagen.com

text: pda|emily.smith@theiagen.com

text: public

text: NCBI

text: Color

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000013505/2022

text: clinical

text: Baseline surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|emily.smith@theiagen.com

text: pda|emily.smith@theiagen.com

text: public

text: NCBI

text: Kaiser Regional-59 Roseville

text: USA: California

text: Homo sapiens

text: SARS-CoV-2/Human/USA/CA-CDPH-6000013506/2022

text: clinical

text: Baseline surveillance


Mycobacterium tuberculosis IMSS082

text: Pathogen.cl

text: pda|paumayell@orcid

text: pda|paumayell@orcid

text: public

text: MEX

text: Mycobacterium tuberculosis IMSS082

text: NCBI

text: Tecnologico de Monterrey

text: Mycobacterium

characteristic: genus

text: Mexico:Oaxaca

text: Homo sapiens

text: Pulmonary tuberculosis

text: Type-2 Diabetes Mellitus

text: female

text: sputum

text: respiratory tract

text: 15.8327 N 96.3206 W

text: Mycobacterium tuberculosis

characteristic: strain

type: AMR curated data - CABBAGE

value: pyrazinamide

value: CLSI

value: susceptible

value: Mycobacterium tuberculosis

value: ethambutol

value: rifampin

value: isoniazid

value: streptomycin


Mycobacterium tuberculosis IMSS083

text: Pathogen.cl

text: pda|paumayell@orcid

text: pda|paumayell@orcid

text: public

text: MEX

text: Mycobacterium tuberculosis IMSS083

text: NCBI

text: Tecnologico de Monterrey

text: Mycobacterium

text: Mexico:Sinaloa

text: Homo sapiens

characteristic: host

text: Pulmonary tuberculosis

text: female

text: sputum

text: respiratory tract

text: 24.7903 N 107.3878 W

text: Mycobacterium tuberculosis

characteristic: organism


Mycobacterium tuberculosis IMSS084

text: Pathogen.cl

characteristic: BioSampleModel

text: pda|paumayell@orcid

text: pda|paumayell@orcid

text: public

text: MEX

text: Mycobacterium tuberculosis IMSS084

text: NCBI

text: Tecnologico de Monterrey

text: Mycobacterium

text: Mexico:Campeche

text: Homo sapiens

text: Pulmonary tuberculosis

text: female

text: sputum

text: respiratory tract

text: 19.8439 N 90.5255 W

text: Mycobacterium tuberculosis

characteristic: title


Mycobacterium tuberculosis IMSS085

text: Pathogen.cl

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: pda|paumayell@orcid

text: pda|paumayell@orcid

text: public

text: MEX

text: Mycobacterium tuberculosis IMSS085

text: NCBI

text: Tecnologico de Monterrey

text: Mycobacterium

text: Mexico:Campeche

text: Homo sapiens

text: Pulmonary tuberculosis

text: female

text: sputum

text: respiratory tract

text: 19.8439 N 90.5255 W

text: Mycobacterium tuberculosis

value: resistant


Mycobacterium tuberculosis IMSS086

text: Pathogen.cl

text: pda|paumayell@orcid

characteristic: INSDC center alias

text: pda|paumayell@orcid

text: public

text: MEX

text: Mycobacterium tuberculosis IMSS086

characteristic: Submitter Id

text: NCBI

text: Tecnologico de Monterrey

text: Mycobacterium

text: Mexico:Nayarit

text: Homo sapiens

text: Pulmonary tuberculosis

text: male

text: sputum

text: respiratory tract

text: 21.5095 N 104.8957 W

text: Mycobacterium tuberculosis


Mycobacterium tuberculosis IMSS087

text: Pathogen.cl

text: pda|paumayell@orcid

text: pda|paumayell@orcid

text: public

text: MEX

text: Mycobacterium tuberculosis IMSS087

text: NCBI

characteristic: broker name

text: Tecnologico de Monterrey

text: Mycobacterium

text: Mexico:Jalisco

text: Homo sapiens

text: Pulmonary tuberculosis

text: Type-2 Diabetes Mellitus

text: male

characteristic: isolate

text: sputum

text: respiratory tract

text: 20.6668 N 103.3918 W

text: Mycobacterium tuberculosis


Mycobacterium tuberculosis IMSS088

text: Pathogen.cl

characteristic: External Id

text: pda|paumayell@orcid

text: pda|paumayell@orcid

characteristic: INSDC center name

text: public

text: MEX

text: Mycobacterium tuberculosis IMSS088

text: NCBI

text: Tecnologico de Monterrey

text: Mycobacterium

text: Mexico:Sinaloa

text: Homo sapiens

text: Pulmonary tuberculosis

text: Type-2 Diabetes Mellitus

text: male

text: sputum

text: respiratory tract

text: 24.7903 N 107.3878 W

text: Mycobacterium tuberculosis


Mycobacterium tuberculosis IMSS089

text: Pathogen.cl

text: pda|paumayell@orcid

text: pda|paumayell@orcid

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: MEX

text: Mycobacterium tuberculosis IMSS089

text: NCBI

text: Tecnologico de Monterrey

text: Mycobacterium

text: Mexico:Jalisco

text: Homo sapiens

text: Pulmonary tuberculosis

text: female

text: sputum

text: respiratory tract

text: 20.6668 N 103.3918 W

text: Mycobacterium tuberculosis


Mycobacterium tuberculosis IMSS091

text: Pathogen.cl

text: pda|paumayell@orcid

text: pda|paumayell@orcid

text: public

characteristic: INSDC status

text: MEX

characteristic: SRA accession

text: Mycobacterium tuberculosis IMSS091

text: NCBI

text: Tecnologico de Monterrey

text: Mycobacterium

text: Mexico:Campeche

text: Homo sapiens

text: Pulmonary tuberculosis

text: Type-2 Diabetes Mellitus

text: male

text: sputum

text: respiratory tract

text: 19.8439 N 90.5255 W

text: Mycobacterium tuberculosis


Mycobacterium tuberculosis IMSS092

text: Pathogen.cl

text: pda|paumayell@orcid

text: pda|paumayell@orcid

text: public

text: MEX

text: Mycobacterium tuberculosis IMSS092

text: NCBI

text: Tecnologico de Monterrey

text: Mycobacterium

characteristic: genus

text: Mexico:Campeche

text: Homo sapiens

text: Pulmonary tuberculosis

text: Type-2 Diabetes Mellitus

text: female

text: sputum

text: respiratory tract

text: 19.8439 N 90.5255 W

text: Mycobacterium tuberculosis

characteristic: strain


Mycobacterium tuberculosis IMSS093

text: Pathogen.cl

text: pda|paumayell@orcid

text: pda|paumayell@orcid

text: public

text: MEX

text: Mycobacterium tuberculosis IMSS093

text: NCBI

text: Tecnologico de Monterrey

text: Mycobacterium

text: Mexico:Sinaloa

text: Homo sapiens

characteristic: host

text: Pulmonary tuberculosis

text: female

text: sputum

text: respiratory tract

text: 24.7903 N 107.3878 W

text: Mycobacterium tuberculosis

characteristic: organism


Mycobacterium tuberculosis IMSS094

text: Pathogen.cl

characteristic: BioSampleModel

text: pda|paumayell@orcid

text: pda|paumayell@orcid

text: public

text: MEX

text: Mycobacterium tuberculosis IMSS094

text: NCBI

text: Tecnologico de Monterrey

text: Mycobacterium

text: Mexico:Baja California

text: Homo sapiens

text: Pulmonary tuberculosis

text: male

text: sputum

text: respiratory tract

text: 32.5027 N 117.0037 W

text: Mycobacterium tuberculosis

characteristic: title


Mycobacterium tuberculosis IMSS095

text: Pathogen.cl

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: pda|paumayell@orcid

text: pda|paumayell@orcid

text: public

text: MEX

text: Mycobacterium tuberculosis IMSS095

text: NCBI

text: Tecnologico de Monterrey

text: Mycobacterium

text: Mexico:Oaxaca

text: Homo sapiens

text: Pulmonary tuberculosis

text: Type-2 Diabetes Mellitus

text: female

text: sputum

text: respiratory tract

text: 15.8327 N 96.3206 W

text: Mycobacterium tuberculosis


Mycobacterium tuberculosis IMSS096

text: Pathogen.cl

text: pda|paumayell@orcid

characteristic: INSDC center alias

text: pda|paumayell@orcid

text: public

text: MEX

text: Mycobacterium tuberculosis IMSS096

characteristic: Submitter Id

text: NCBI

text: Tecnologico de Monterrey

text: Mycobacterium

text: Mexico:Yucatan

text: Homo sapiens

text: Pulmonary tuberculosis

text: male

text: sputum

text: respiratory tract

text: 20.9754 N 89.617 W

text: Mycobacterium tuberculosis


Mycobacterium tuberculosis IMSS097

text: Pathogen.cl

text: pda|paumayell@orcid

text: pda|paumayell@orcid

text: public

text: MEX

text: Mycobacterium tuberculosis IMSS097

text: NCBI

characteristic: broker name

text: Tecnologico de Monterrey

text: Mycobacterium

text: Mexico:Oaxaca

text: Homo sapiens

text: Pulmonary tuberculosis

text: male

characteristic: isolate

text: sputum

text: respiratory tract

text: 15.8327 N 96.3206 W

text: Mycobacterium tuberculosis


Mycobacterium tuberculosis IMSS099

text: Pathogen.cl

characteristic: External Id

text: pda|paumayell@orcid

text: pda|paumayell@orcid

characteristic: INSDC center name

text: public

text: MEX

text: Mycobacterium tuberculosis IMSS099

text: NCBI

text: Tecnologico de Monterrey

text: Mycobacterium

text: Mexico:Baja California

text: Homo sapiens

text: Pulmonary tuberculosis

text: male

text: sputum

text: respiratory tract

text: 32.5027 N 117.0037 W

text: Mycobacterium tuberculosis


Mycobacterium tuberculosis IMSS100

text: Pathogen.cl

text: pda|paumayell@orcid

text: pda|paumayell@orcid

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: MEX

text: Mycobacterium tuberculosis IMSS100

text: NCBI

text: Tecnologico de Monterrey

text: Mycobacterium

text: Mexico:Estado de Mexico

text: Homo sapiens

text: Pulmonary tuberculosis

text: Type-2 Diabetes Mellitus

text: female

text: sputum

text: respiratory tract

text: 19.685 N 99.1281 W

text: Mycobacterium tuberculosis


Mycobacterium tuberculosis IMSS101

text: Pathogen.cl

text: pda|paumayell@orcid

text: pda|paumayell@orcid

text: public

characteristic: INSDC status

text: MEX

characteristic: SRA accession

text: Mycobacterium tuberculosis IMSS101

text: NCBI

text: Tecnologico de Monterrey

text: Mycobacterium

text: Mexico:Jalisco

text: Homo sapiens

text: Pulmonary tuberculosis

text: Type-2 Diabetes Mellitus

text: male

text: sputum

text: respiratory tract

text: 20.6668 N 103.3918 W

text: Mycobacterium tuberculosis


Mycobacterium tuberculosis IMSS102

text: Pathogen.cl

text: pda|paumayell@orcid

text: pda|paumayell@orcid

text: public

text: MEX

text: Mycobacterium tuberculosis IMSS102

text: NCBI

text: Tecnologico de Monterrey

text: Mycobacterium

characteristic: genus

text: Mexico:Chiapas

text: Homo sapiens

text: Pulmonary tuberculosis

text: Type-2 Diabetes Mellitus

text: female

text: sputum

text: respiratory tract

text: 14.9039 N 92.2575 W

text: Mycobacterium tuberculosis

characteristic: strain


Mycobacterium tuberculosis IMSS103

text: Pathogen.cl

text: pda|paumayell@orcid

text: pda|paumayell@orcid

text: public

text: MEX

text: Mycobacterium tuberculosis IMSS103

text: NCBI

text: Tecnologico de Monterrey

text: Mycobacterium

text: Mexico:Sinaloa

text: Homo sapiens

characteristic: host

text: Pulmonary tuberculosis

text: female

text: sputum

text: respiratory tract

text: 24.7903 N 107.3878 W

text: Mycobacterium tuberculosis

characteristic: organism


Mycobacterium tuberculosis IMSS104

text: Pathogen.cl

characteristic: BioSampleModel

text: pda|paumayell@orcid

text: pda|paumayell@orcid

text: public

text: MEX

text: Mycobacterium tuberculosis IMSS104

text: NCBI

text: Tecnologico de Monterrey

text: Mycobacterium

text: Mexico:Nuevo Leon

text: Homo sapiens

text: Pulmonary tuberculosis

text: female

text: sputum

text: respiratory tract

text: 25.6751 N 100.3185 W

text: Mycobacterium tuberculosis

characteristic: title


Mycobacterium tuberculosis IMSS106

text: Pathogen.cl

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: pda|paumayell@orcid

text: pda|paumayell@orcid

text: public

text: MEX

text: Mycobacterium tuberculosis IMSS106

text: NCBI

text: Tecnologico de Monterrey

text: Mycobacterium

text: Mexico:Baja California

text: Homo sapiens

text: Pulmonary tuberculosis

text: Type-2 Diabetes Mellitus

text: female

text: sputum

text: respiratory tract

text: 32.5027 N 117.0037 W

text: Mycobacterium tuberculosis


Mycobacterium tuberculosis IMSS107

text: Pathogen.cl

text: pda|paumayell@orcid

characteristic: INSDC center alias

text: pda|paumayell@orcid

text: public

text: MEX

text: Mycobacterium tuberculosis IMSS107

characteristic: Submitter Id

text: NCBI

text: Tecnologico de Monterrey

text: Mycobacterium

text: Mexico:Sinaloa

text: Homo sapiens

text: Pulmonary tuberculosis

text: Type-2 Diabetes Mellitus

text: male

text: sputum

text: respiratory tract

text: 24.7903 N 107.3878 W

text: Mycobacterium tuberculosis


Mycobacterium tuberculosis IMSS108

text: Pathogen.cl

text: pda|paumayell@orcid

text: pda|paumayell@orcid

text: public

text: MEX

text: Mycobacterium tuberculosis IMSS108

text: NCBI

characteristic: broker name

text: Tecnologico de Monterrey

text: Mycobacterium

text: Mexico:Estado de Mexico

text: Homo sapiens

text: Pulmonary tuberculosis

text: male

characteristic: isolate

text: sputum

text: respiratory tract

text: 19.685 N 99.1281 W

text: Mycobacterium tuberculosis


Mycobacterium tuberculosis IMSS109

text: Pathogen.cl

characteristic: External Id

text: pda|paumayell@orcid

text: pda|paumayell@orcid

characteristic: INSDC center name

text: public

text: MEX

text: Mycobacterium tuberculosis IMSS109

text: NCBI

text: Tecnologico de Monterrey

text: Mycobacterium

text: Mexico:Jalisco

text: Homo sapiens

text: Pulmonary tuberculosis

text: Type-2 Diabetes Mellitus

text: female

text: sputum

text: respiratory tract

text: 20.6668 N 103.3918 W

text: Mycobacterium tuberculosis


Mycobacterium tuberculosis IMSS120

text: Pathogen.cl

text: pda|paumayell@orcid

text: pda|paumayell@orcid

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: MEX

text: Mycobacterium tuberculosis IMSS120

text: NCBI

text: Tecnologico de Monterrey

text: Mycobacterium

text: Mexico:Campeche

text: Homo sapiens

text: Pulmonary tuberculosis

text: Type-2 Diabetes Mellitus

text: female

text: sputum

text: respiratory tract

text: 19.8439 N 90.5255 W

text: Mycobacterium tuberculosis


Mycobacterium tuberculosis IMSS121

text: Pathogen.cl

text: pda|paumayell@orcid

text: pda|paumayell@orcid

text: public

characteristic: INSDC status

text: MEX

characteristic: SRA accession

text: Mycobacterium tuberculosis IMSS121

text: NCBI

text: Tecnologico de Monterrey

text: Mycobacterium

text: Mexico:Oaxaca

text: Homo sapiens

text: Pulmonary tuberculosis

text: Type-2 Diabetes Mellitus

text: male

text: sputum

text: respiratory tract

text: 15.8327 N 96.3206 W

text: Mycobacterium tuberculosis


Mycobacterium tuberculosis IMSS125

text: Pathogen.cl

text: pda|paumayell@orcid

text: pda|paumayell@orcid

text: public

text: MEX

text: Mycobacterium tuberculosis IMSS125

text: NCBI

text: Tecnologico de Monterrey

text: Mycobacterium

characteristic: genus

text: Mexico:Zacatecas

text: Homo sapiens

text: Pulmonary tuberculosis

text: female

text: sputum

text: respiratory tract

text: 22.7684 N 102.5814 W

text: Mycobacterium tuberculosis

characteristic: strain


Mycobacterium tuberculosis IMSS127

text: Pathogen.cl

text: pda|paumayell@orcid

text: pda|paumayell@orcid

text: public

text: MEX

text: Mycobacterium tuberculosis IMSS127

text: NCBI

text: Tecnologico de Monterrey

text: Mycobacterium

text: Mexico:Baja California

text: Homo sapiens

characteristic: host

text: Pulmonary tuberculosis

text: Type-2 Diabetes Mellitus

text: male

text: sputum

text: respiratory tract

text: 32.5027 N 117.0037 W

text: Mycobacterium tuberculosis

characteristic: organism


Mycobacterium tuberculosis IMSS128

text: Pathogen.cl

characteristic: BioSampleModel

text: pda|paumayell@orcid

text: pda|paumayell@orcid

text: public

text: MEX

text: Mycobacterium tuberculosis IMSS128

text: NCBI

text: Tecnologico de Monterrey

text: Mycobacterium

text: Mexico:Nayarit

text: Homo sapiens

text: Pulmonary tuberculosis

text: Type-2 Diabetes Mellitus

text: male

text: sputum

text: respiratory tract

text: 21.5095 N 104.8957 W

text: Mycobacterium tuberculosis

characteristic: title


Mycobacterium tuberculosis IMSS130

text: Pathogen.cl

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: pda|paumayell@orcid

text: pda|paumayell@orcid

text: public

text: MEX

text: Mycobacterium tuberculosis IMSS130

text: NCBI

text: Tecnologico de Monterrey

text: Mycobacterium

text: Mexico:San Luis Potosi

text: Homo sapiens

text: Pulmonary tuberculosis

text: Type-2 Diabetes Mellitus

text: female

text: sputum

text: respiratory tract

text: 21.9243 N 99.3937 W

text: Mycobacterium tuberculosis


Mycobacterium tuberculosis IMSS136

text: Pathogen.cl

text: pda|paumayell@orcid

characteristic: INSDC center alias

text: pda|paumayell@orcid

text: public

text: MEX

text: Mycobacterium tuberculosis IMSS136

characteristic: Submitter Id

text: NCBI

text: Tecnologico de Monterrey

text: Mycobacterium

text: Mexico:Nuevo Leon

text: Homo sapiens

text: Pulmonary tuberculosis

text: Type-2 Diabetes Mellitus

text: male

text: sputum

text: respiratory tract

text: 25.6751 N 100.3185 W

text: Mycobacterium tuberculosis


text: Pathogen.cl

text: pda|tseuberlich

text: pda|tseuberlich

text: public

text: NCBI

characteristic: broker name

text: University of Bern

text: Switzerland

text: Homo sapiens

text: 26 years

text: Poliomyelitis

text: death

text: human brain tissue

text: restricted access

text: Enterovirus C

text: Poliovirus 1 strain CHE1884/53

text: Enterovirus C


text: Pathogen.cl

characteristic: External Id

text: pda|tseuberlich

text: pda|tseuberlich

text: public

text: NCBI

text: University of Bern

text: Switzerland

text: Homo sapiens

text: 14 days

text: Poliomyelitis

text: death

text: human brain tissue

text: restricted access

text: Enterovirus C

text: Poliovirus 1 strain CHE2132/54

text: Enterovirus C


text: Shanxi University

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: China: Taiyuan

text: zebrafish gut

text: 30.15 N 112.33 E

text: metagenome

text: replicate=replicate biological 1

characteristic: replicate

text: Metagenome or environmental sample from metagenome


text: Shanxi University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: SRA accession

text: China: Taiyuan

text: zebrafish gut

text: 30.15 N 112.33 E

text: metagenome

text: replicate=replicate biological 2


text: Shanxi University

text: live

text: Metagenome or environmental

text: China: Taiyuan

text: zebrafish gut

text: 30.15 N 112.33 E

text: metagenome

characteristic: organism

text: replicate=replicate biological 3


text: Shanxi University

text: live

text: Metagenome or environmental

text: China: Taiyuan

text: zebrafish gut

text: 30.15 N 112.33 E

text: metagenome

text: replicate=replicate biological 4

characteristic: title


text: Shanxi University

text: live

text: Metagenome or environmental

text: China: Taiyuan

text: zebrafish gut

text: 30.15 N 112.33 E

text: metagenome

text: replicate=replicate biological 5


text: Shanxi University

text: live

text: Metagenome or environmental

text: China: Taiyuan

text: zebrafish gut

text: 30.15 N 112.33 E

text: metagenome

text: replicate=replicate biological 6


text: Shanxi University

text: live

text: Metagenome or environmental

text: China: Taiyuan

text: zebrafish gut

text: 30.15 N 112.33 E

text: metagenome

text: replicate=replicate biological 7


text: Shanxi University

text: live

text: Metagenome or environmental

text: China: Taiyuan

text: zebrafish gut

text: 30.15 N 112.33 E

text: metagenome

text: replicate=replicate biological 8


text: Shanxi University

text: live

text: Metagenome or environmental

text: China: Taiyuan

text: zebrafish gut

text: 30.15 N 112.33 E

text: metagenome

text: replicate=replicate biological 9


text: Shanxi University

text: live

text: Metagenome or environmental

text: China: Taiyuan

text: zebrafish gut

text: 30.15 N 112.33 E

text: metagenome

text: replicate=replicate biological 10


text: Shanxi University

text: live

text: Metagenome or environmental

text: China: Taiyuan

text: zebrafish gut

text: 30.15 N 112.33 E

text: metagenome

text: replicate=replicate biological 11


text: Shanxi University

text: live

text: Metagenome or environmental

text: China: Taiyuan

text: zebrafish gut

text: 30.15 N 112.33 E

text: metagenome

text: replicate=replicate biological 12


text: Shanxi University

text: live

text: Metagenome or environmental

text: China: Taiyuan

text: zebrafish gut

text: 30.15 N 112.33 E

text: metagenome

text: replicate=replicate biological 13


text: Shanxi University

text: live

text: Metagenome or environmental

text: China: Taiyuan

text: zebrafish gut

text: 30.15 N 112.33 E

text: metagenome

text: replicate=replicate biological 14


text: Shanxi University

text: live

text: Metagenome or environmental

text: China: Taiyuan

text: zebrafish gut

text: 30.15 N 112.33 E

text: metagenome

text: replicate=replicate biological 15


text: Shanxi University

text: live

text: Metagenome or environmental

text: China: Taiyuan

text: zebrafish gut

text: 30.15 N 112.33 E

text: metagenome

text: replicate=replicate biological 16


text: Shanxi University

text: live

text: Metagenome or environmental

text: China: Taiyuan

text: zebrafish gut

text: 30.15 N 112.33 E

text: metagenome

text: replicate=replicate biological 17


text: Shanxi University

text: live

text: Metagenome or environmental

text: China: Taiyuan

text: zebrafish gut

text: 30.15 N 112.33 E

text: metagenome

text: replicate=replicate biological 18


text: Shanxi University

text: live

text: Metagenome or environmental

text: China: Taiyuan

text: zebrafish gut

text: 30.15 N 112.33 E

text: metagenome

text: replicate=replicate biological 19


text: Shanxi University

text: live

text: Metagenome or environmental

text: China: Taiyuan

text: zebrafish gut

text: 30.15 N 112.33 E

text: metagenome

text: replicate=replicate biological 20


text: Shanxi University

text: live

text: Metagenome or environmental

text: China: Taiyuan

text: zebrafish gut

text: 30.15 N 112.33 E

text: metagenome

text: replicate=replicate biological 21


text: Shanxi University

text: live

text: Metagenome or environmental

text: China: Taiyuan

text: zebrafish gut

text: 30.15 N 112.33 E

text: metagenome

text: replicate=replicate biological 22


text: Shanxi University

text: live

text: Metagenome or environmental

text: China: Taiyuan

text: zebrafish gut

text: 30.15 N 112.33 E

text: metagenome

text: replicate=replicate biological 23


text: Shanxi University

text: live

text: Metagenome or environmental

text: China: Taiyuan

text: zebrafish gut

text: 30.15 N 112.33 E

text: metagenome

text: replicate=replicate biological 24


text: Shanxi University

text: live

text: Metagenome or environmental

text: China: Taiyuan

text: zebrafish gut

text: 30.15 N 112.33 E

text: metagenome

text: replicate=replicate biological 25


text: Shanxi University

text: live

text: Metagenome or environmental

text: China: Taiyuan

text: zebrafish gut

text: 30.15 N 112.33 E

text: metagenome

text: replicate=replicate biological 26


text: Shanxi University

text: live

text: Metagenome or environmental

text: China: Taiyuan

text: zebrafish gut

text: 30.15 N 112.33 E

text: metagenome

text: replicate=replicate biological 27


text: Shanxi University

text: live

text: Metagenome or environmental

text: China: Taiyuan

text: zebrafish gut

text: 30.15 N 112.33 E

text: metagenome

text: replicate=replicate biological 28


text: Shanxi University

text: live

text: Metagenome or environmental

text: China: Taiyuan

text: zebrafish gut

text: 30.15 N 112.33 E

text: metagenome

text: replicate=replicate biological 29


text: Shanxi University

text: live

text: Metagenome or environmental

text: China: Taiyuan

text: zebrafish gut

text: 30.15 N 112.33 E

text: metagenome

text: replicate=replicate biological 30


text: Shanxi University

text: live

text: Metagenome or environmental

text: China: Taiyuan

text: zebrafish gut

text: 30.15 N 112.33 E

text: metagenome

text: replicate=replicate biological 31


text: Guangxi University

text: live

text: Metagenome or environmental

characteristic: date

text: root metagenome

text: Metagenome or environmental sample from root metagenome


text: Guangxi University

text: live

text: Metagenome or environmental

text: root metagenome


text: Southwest Medical University

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIGS:5.0

characteristic: description

text: wastewater treatment plant

text: sewage influx

text: no

text: China:Luzhou

text: no

text: 28.87 N 105.48 E

text: Enterobacter kobei

text: no

characteristic: strain

text: Enterobacter kobei SCLZS19


Bovine tannery effluent batch 1

text: Cape Peninsula University of Technology

text: live

text: Metagenome or environmental

text: South Africa: Gqeberha

text: Tannery effluent

text: wastewater metagenome

text: BTE


HLFCR1 # 1

text: Cape Peninsula University of Technology

text: live

text: Metagenome or environmental

text: South Africa: Cape Town laboratory wastewater treatment system

text: Hybrid linear channel flow 1 reactor bulk liquid

text: wastewater metagenome

text: channel 1 3 June


HLFCR1 #2

text: Cape Peninsula University of Technology

text: live

text: Metagenome or environmental

text: wastewater metagenome

text: channel 1 14 July


HLFCR1 #3

text: Cape Peninsula University of Technology

text: live

text: Metagenome or environmental

text: wastewater metagenome

text: channel 1 20 June


HLFCR1 #4

text: Cape Peninsula University of Technology

text: live

text: Metagenome or environmental

text: wastewater metagenome

text: channel 1 26 Aug


Channel 2 1

text: Cape Peninsula University of Technology

text: live

text: Metagenome or environmental

text: Hybrid linear channel flow reactor 2 bulk liquid

text: wastewater metagenome

text: channel 2 7 June


Channel 2 2

text: Cape Peninsula University of Technology

text: live

text: Metagenome or environmental

text: wastewater metagenome

text: channel 2 15 July


Channel 2 3

text: Cape Peninsula University of Technology

text: live

text: Metagenome or environmental

text: wastewater metagenome

text: channel 2 20 Aug


Channel 2 4

text: Cape Peninsula University of Technology

text: live

text: Metagenome or environmental

text: wastewater metagenome

text: channel 2 27 Aug


HLFCR2 inoculum

text: Cape Peninsula University of Technology

text: live

text: Metagenome or environmental

text: Inoculum for hybrid linear channel flow reactor

text: wastewater metagenome

text: Inoculum


text: Kangwon National University

text: live

text: Microbe, viral or environmental

text: South Korea

text: apple orchard

text: Bacillus altitudinis

text: cell culture

text: Microbe sample from Bacillus altitudinis


text: Ningbo University

text: live

text: Invertebrate

text: China: Ningbo

text: rice

characteristic: host

text: NBU

characteristic: isolate

text: Ischnura

text: Arthropod tissue

characteristic: tissue

text: Invertebrate sample from Ischnura


characteristic: External Id

text: Zhongnan Hospital of Wuhan University

characteristic: INSDC center name

text: live

text: Model organism or animal

text: 3 days

characteristic: age

characteristic: genotype

text: Mus musculus

text: male

characteristic: sex

text: pre-osteoblasts

text: Model organism or animal sample from Mus musculus

text: Osteoblast differentiation for 6 days

characteristic: treatment


Bglap-Cre; Niban2-flox/flox

text: Zhongnan Hospital of Wuhan University

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 3 days

text: Bglap-Cre; Niban2-flox/flox

text: Mus musculus

text: male

text: Bglap-Cre; Niban2flox/flox-C57BL/6

text: pre-osteoblasts

text: Osteoblast differentiation for 6 days


Bacillus safensis KPB31

text: Kangwon National University

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: South Korea

text: apple orchard

text: Bacillus safensis

characteristic: organism

text: cell culture

text: Microbe sample from Bacillus safensis

characteristic: title


Bacillus subtilis YFI-E109

text: Chinese Academy of Fishery Sciences

text: live

text: Microbe, viral or environmental

text: China:Wuhan

text: Tachysurus fulvidraco

characteristic: host

text: Bacillus subtilis

text: mix culture

characteristic: strain

text: Microbe sample from Bacillus subtilis


R.solani Ra1-1

text: Northwest A&F University

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: China:Inner Mongolia

text: Solanum tuberosum

text: potato

characteristic: isolate

text: Rhizoctonia solani

text: Fungus sample

text: R.solani Ra1_S1

text: CMV infected


R.solani Ra1-2

characteristic: External Id

text: Northwest A&F University

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: China:Inner Mongolia

text: Solanum tuberosum

text: potato

text: Rhizoctonia solani

text: Fungus sample

text: R.solani Ra1_S2

text: CMV infected


R.solani Ra1/CMV-cured-1

text: Northwest A&F University

text: live

text: Microbe, viral or environmental

text: China:Inner Mongolia

text: Solanum tuberosum

text: potato

text: Rhizoctonia solani

text: Fungus sample

text: R.solani Ra1_VF1

text: virus free


R.solani Ra1/CMV-cured-2

text: Northwest A&F University

text: live

text: Microbe, viral or environmental

text: China:Inner Mongolia

text: Solanum tuberosum

text: potato

text: Rhizoctonia solani

text: Fungus sample

text: R.solani Ra1_VF2

text: virus free


R.solani/CMV Fny

text: Northwest A&F University

text: live

text: Microbe, viral or environmental

text: China:Inner Mongolia

text: Solanum tuberosum

text: potato

text: Rhizoctonia solani

text: Fungus sample

text: R.solani Ra1/Fny

text: CMV infected


R.Solani 80-1

text: Northwest A&F University

text: live

text: Microbe, viral or environmental

text: China:Inner Mongolia

text: Solanum tuberosum

text: potato

text: Rhizoctonia solani

text: Fungus sample

text: R.Solani 80_V1

text: RsEnLV1 infected


R.Solani 80-2

text: Northwest A&F University

text: live

text: Microbe, viral or environmental

text: China:Inner Mongolia

text: Solanum tuberosum

text: potato

text: Rhizoctonia solani

text: Fungus sample

text: R.Solani 80_V2

text: RsEnLV1 infected


R.Solani 80/virus-cured-1

text: Northwest A&F University

text: live

text: Microbe, viral or environmental

text: China:Inner Mongolia

text: Solanum tuberosum

text: potato

text: Rhizoctonia solani

text: Fungus sample

text: R.Solani 80_VF1

text: virus free


R.Solani 80/virus-cured-2

text: Northwest A&F University

text: live

text: Microbe, viral or environmental

text: China:Inner Mongolia

text: Solanum tuberosum

text: potato

text: Rhizoctonia solani

text: Fungus sample

text: R.Solani 80_VF2

text: virus free


F.graminearum Wt/virus free-1

text: Northwest A&F University

text: live

text: Microbe, viral or environmental

text: China:Shaanxi

text: Solanum tuberosum

text: potato

text: Fusarium graminearum

text: Fungus sample

text: F.graminearum PH-1 WT_VF1

text: virus free


F.graminearum Wt/virus free-2

text: Northwest A&F University

text: live

text: Microbe, viral or environmental

text: China:Shaanxi

text: Solanum tuberosum

text: potato

text: Fusarium graminearum

text: Fungus sample

text: F.graminearum PH-1 WT_VF2

text: virus free


F.graminearum Wt-1

text: Northwest A&F University

text: live

text: Microbe, viral or environmental

text: China:Shaanxi

text: Solanum tuberosum

text: potato

text: Fusarium graminearum

text: Fungus sample

text: F.graminearum PH-1 WT_V1

text: TMV infected


F.graminearum Wt-2

text: Northwest A&F University

text: live

text: Microbe, viral or environmental

text: China:Shaanxi

text: Solanum tuberosum

text: potato

text: Fusarium graminearum

text: Fungus sample

text: F.graminearum PH-1 WT_V2

text: TMV infected


F.graminearum dcl1-1

text: Northwest A&F University

text: live

text: Microbe, viral or environmental

text: China:Shaanxi

text: Solanum tuberosum

text: potato

text: Fusarium graminearum

text: Fungus sample

text: F.graminearum PH-1 dcl1 mutant_V1

text: TMV infected


F.graminearum dcl1-2

text: Northwest A&F University

text: live

text: Microbe, viral or environmental

text: China:Shaanxi

text: Solanum tuberosum

text: potato

text: Fusarium graminearum

text: Fungus sample

text: F.graminearum PH-1 dcl1 mutant_V2

text: TMV infected


F.graminearum dcl2-1

text: Northwest A&F University

text: live

text: Microbe, viral or environmental

text: China:Shaanxi

text: Solanum tuberosum

text: potato

text: Fusarium graminearum

text: Fungus sample

text: F.graminearum PH-1 dcl2 mutant_V1

text: TMV infected


F.graminearum dcl2-2

text: Northwest A&F University

text: live

text: Microbe, viral or environmental

text: China:Shaanxi

text: Solanum tuberosum

text: potato

text: Fusarium graminearum

text: Fungus sample

text: F.graminearum PH-1 dcl2 mutant_V2

text: TMV infected


F.graminearum dcl1dcl2-1

text: Northwest A&F University

text: live

text: Microbe, viral or environmental

text: China:Shaanxi

text: Solanum tuberosum

text: potato

text: Fusarium graminearum

text: Fungus sample

text: F.graminearum PH-1 dcl1/dcl2 mutant_V1

text: TMV infected


F.graminearum dcl1dcl2-2

text: Northwest A&F University

text: live

text: Microbe, viral or environmental

text: China:Shaanxi

text: Solanum tuberosum

text: potato

text: Fusarium graminearum

text: Fungus sample

text: F.graminearum PH-1 dcl1/dcl2 mutant_V2

text: TMV infected


MUT 1

text: Southwest University

text: live

text: Model organism or animal

text: larvae

text: Danio rerio

text: replicate = biological replicate 1

characteristic: replicate

text: pooled male and female

text: AB

text: heart

characteristic: tissue

text: Model organism or animal sample from Danio rerio


MUT 2

text: Southwest University

text: live

text: Model organism or animal

text: larvae

text: Danio rerio

text: replicate = biological replicate 2

text: pooled male and female

characteristic: sex

text: AB

text: heart


MUT 3

text: Southwest University

characteristic: INSDC first public

text: live

text: Model organism or animal

text: larvae

text: Danio rerio

text: replicate = biological replicate 3

text: pooled male and female

text: AB

text: heart


WT 1

text: Southwest University

characteristic: INSDC last update

text: live

text: Model organism or animal

text: larvae

text: Danio rerio

text: replicate = biological replicate 4

text: pooled male and female

text: AB

text: heart


WT 2

text: Southwest University

text: live

text: Model organism or animal

text: larvae

text: Danio rerio

text: replicate = biological replicate 5

text: pooled male and female

text: AB

text: heart


WT 3

text: Southwest University

text: live

text: Model organism or animal

text: larvae

text: Danio rerio

text: replicate = biological replicate 6

text: pooled male and female

text: AB

text: heart