text: V

characteristic: BRrepeats

text: MIGS/MIMS/MIMARKS.host-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: FEVpcpred

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Not abnormal

characteristic: abnhr

text: Not abnormal

characteristic: abnrr

text: Not abnormal

characteristic: abnsat

text: no

text: Adherent

characteristic: adherence

text: no

characteristic: adm

characteristic: ageyart

text: yes

text: no

text: yes

text: no

text: EFV/NVP

characteristic: artreg

text: yes

characteristic: attendschool

characteristic: barcode

text: NCBI

characteristic: broker name

text: yes

text: no

text: COTRIMOXAZOLE

text: ['NA', '2019-02-20T00:00:00']

characteristic: endtreatdate

text: human

text: respiratory tract

text: sputum

text: black

text: Zimbabwe: Harare

text: trial

text: no

text: Homo sapiens

text: HIV-associated chronic lung disease

text: yes

text: student

text: male

text: human respiratory

text: GACTTGGTATTC

text: sputum

text: 18 mths

text: 17.82 S 31.04 E

text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: yes

text: COTRIMOXAZOLE

text: stored in primestore

text: ['1', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: yes

text: human sputum metagenome

text: Completed

text: Azithromycin

text: Week 72

text: yes

text: yes

text: yes

text: no


status: PUBLIC

text: MIGS/MIMS/MIMARKS.host-associated

tag: attribute

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: FVC

characteristic: FVCZ

characteristic: FVCpcpred

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Not abnormal

text: Not abnormal

text: Not abnormal

text: no

text: Adherent

text: no

text: yes

text: no

text: no

text: yes

text: ATV/LPV/PI

text: yes

text: NCBI

text: yes

characteristic: cotrimoxazole

text: no

characteristic: dateart

characteristic: datehiv

characteristic: duryart

characteristic: endfollowup

text: ['NA', '2019-03-07T00:00:00']

characteristic: enrolmonth

text: human

text: respiratory tract

text: sputum

text: black

characteristic: ethnicity

text: Zimbabwe: Harare

text: trial

characteristic: group

text: no

text: Homo sapiens

characteristic: host

text: HIV-associated chronic lung disease

text: yes

text: student

text: female

text: human respiratory

text: GCGTGTTAAACC

text: sputum

text: 18 mths

characteristic: lastvisit

text: 17.82 S 31.04 E

text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['1', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: no

text: human sputum metagenome

text: Completed

text: Azithromycin

text: Week 72

text: yes

text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.host-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: FEVpcpred

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: AAB

characteristic: WRrepeats

text: AAB

text: Not abnormal

characteristic: abnhr

text: Abnormal RR

characteristic: abnrr

text: Not abnormal

characteristic: abnsat

text: yes

text: Not Adherent

characteristic: adherence

text: no

characteristic: adm

characteristic: ageyart

text: yes

text: no

text: no

text: yes

text: ATV/LPV/PI

characteristic: artreg

text: no

characteristic: attendschool

characteristic: barcode

text: NCBI

characteristic: broker name

text: no

text: yes

text: ['2017-10-02T00:00:00', '2017-10-02T00:00:00']

characteristic: endtreatdate

text: human

text: respiratory tract

text: sputum

text: black

text: Malawi: Blantyre

text: trial

text: no

text: Homo sapiens

text: HIV-associated chronic lung disease

text: yes

text: male

text: human respiratory

text: ACGGCCAATCGA

text: sputum

text: 18 mths

characteristic: lastvisitdate

text: 15.77 S 35.02 E

text: no

text: no

text: human sputum metagenome

characteristic: organism

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['2', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: no

text: human sputum metagenome

text: Completed

text: Placebo

text: Week 0

text: yes

text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.host-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: FEVpcpred

characteristic: FVC

characteristic: FVCZ

characteristic: FVCpcpred

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Abnormal HR

text: Abnormal RR

text: Not abnormal

text: no

text: Not Adherent

text: no

text: no

text: yes

text: no

text: yes

text: ATV/LPV/PI

text: yes

text: NCBI

text: yes

characteristic: cotrimoxazole

text: no

characteristic: dateart

characteristic: datehiv

characteristic: duryart

characteristic: endfollowup

text: ['2018-01-10T00:00:00', '2018-01-10T00:00:00']

text: human

text: respiratory tract

text: sputum

text: black

characteristic: ethnicity

text: Malawi: Blantyre

text: trial

characteristic: group

text: no

text: Homo sapiens

characteristic: host

text: HIV-associated chronic lung disease

text: yes

text: student

text: male

text: human respiratory

text: CATCGGTCAAGG

text: sputum

text: 18 mths

characteristic: lastvisit

text: 15.77 S 35.02 E

text: no

text: yes

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['0.1', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: no

text: human sputum metagenome

text: Completed

text: Azithromycin

text: Week 0

text: no

text: yes

text: no

text: no


text: MIGS/MIMS/MIMARKS.host-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: FEVpcpred

characteristic: FVC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Not abnormal

characteristic: abnhr

text: Abnormal RR

characteristic: abnrr

text: Not abnormal

characteristic: abnsat

text: yes

text: Adherent

characteristic: adherence

text: no

characteristic: adm

characteristic: ageyart

text: no

text: no

text: no

text: yes

text: ATV/LPV/PI

characteristic: artreg

text: yes

characteristic: attendschool

characteristic: barcode

text: NCBI

characteristic: broker name

text: yes

text: no

text: ['2018-01-17T00:00:00', '2018-01-17T00:00:00']

characteristic: endtreatdate

characteristic: enrolmonth

text: human

text: respiratory tract

text: sputum

text: black

text: Malawi: Blantyre

text: trial

text: no

text: Homo sapiens

text: HIV-associated chronic lung disease

text: yes

text: student

text: male

text: human respiratory

text: TCGAATCACAGC

text: sputum

text: 15 mths

text: 15.77 S 35.02 E

text: yes

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['5', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: LTFU

text: yes

text: human sputum metagenome

text: Completed

text: Azithromycin

text: Week 0

text: no

text: no

text: no

text: no


text: MIGS/MIMS/MIMARKS.host-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: FVCZ

characteristic: FVCpcpred

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Not abnormal

text: Abnormal RR

text: Not abnormal

text: no

text: Not Adherent

text: no

text: no

text: no

text: no

text: yes

text: ATV/LPV/PI

text: yes

text: NCBI

text: yes

characteristic: cotrimoxazole

text: yes

characteristic: dateart

characteristic: datehiv

characteristic: duryart

characteristic: endfollowup

text: ['NA', 'NA']

text: human

text: respiratory tract

text: sputum

text: black

characteristic: ethnicity

text: Malawi: Blantyre

text: trial

characteristic: group

text: no

text: Homo sapiens

characteristic: host

text: HIV-associated chronic lung disease

text: yes

text: student

text: male

text: human respiratory

text: CCAAGTCTTACA

text: sputum

text: unscheduled

text: 15.77 S 35.02 E

text: no

text: yes

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['10', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: LTFU

text: no

text: human sputum metagenome

text: Completed

text: Placebo

text: Week 0

text: yes

text: no

text: no

text: no


text: MIGS/MIMS/MIMARKS.host-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: FEVpcpred

characteristic: FVC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Not abnormal

characteristic: abnhr

text: Not abnormal

characteristic: abnrr

text: Not abnormal

characteristic: abnsat

text: no

text: Not Adherent

characteristic: adherence

text: no

characteristic: adm

characteristic: ageyart

text: no

text: no

text: yes

text: no

text: EFV/NVP

characteristic: artreg

text: yes

characteristic: attendschool

characteristic: barcode

text: NCBI

characteristic: broker name

text: yes

text: yes

text: ['NA', 'NA']

characteristic: endtreatdate

characteristic: enrolmonth

text: human

text: respiratory tract

text: sputum

text: black

text: Malawi: Blantyre

text: trial

text: no

text: Homo sapiens

text: HIV-associated chronic lung disease

text: yes

text: student

text: male

text: human respiratory

text: ACGGCATGGCAT

text: sputum

text: 18 mths

text: 15.77 S 35.02 E

text: no

text: yes

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['0.5', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: no

text: human sputum metagenome

text: Completed

text: Placebo

text: Week 0

text: no

text: yes

text: no

text: no


text: MIGS/MIMS/MIMARKS.host-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: FVCZ

characteristic: FVCpcpred

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Not abnormal

text: Abnormal RR

text: Not abnormal

text: no

text: Adherent

text: no

text: yes

text: no

text: yes

text: no

text: EFV/NVP

text: yes

text: NCBI

text: yes

characteristic: cotrimoxazole

text: no

characteristic: dateart

characteristic: datehiv

characteristic: duryart

characteristic: endfollowup

text: ['2018-03-28T00:00:00', '2018-03-28T00:00:00']

text: human

text: respiratory tract

text: sputum

text: black

characteristic: ethnicity

text: Malawi: Blantyre

text: trial

characteristic: group

text: no

text: Homo sapiens

characteristic: host

text: HIV-associated chronic lung disease

text: yes

text: student

text: male

text: human respiratory

text: TAAACCGCGTGT

text: sputum

text: 18 mths

text: 15.77 S 35.02 E

text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['2', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: no

text: human sputum metagenome

text: Completed

text: Azithromycin

text: Week 0

text: yes

text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.host-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: FEVpcpred

characteristic: FVC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Not abnormal

characteristic: abnhr

text: Not abnormal

characteristic: abnrr

text: Abnormal Sat

characteristic: abnsat

text: no

text: Not Adherent

characteristic: adherence

text: no

characteristic: adm

characteristic: ageyart

text: yes

text: no

text: yes

text: no

text: EFV/NVP

characteristic: artreg

text: yes

characteristic: attendschool

characteristic: barcode

text: NCBI

characteristic: broker name

text: yes

text: no

text: ['2018-05-21T00:00:00', '2018-05-21T00:00:00']

characteristic: endtreatdate

characteristic: enrolmonth

text: human

text: respiratory tract

text: sputum

text: black

text: Malawi: Blantyre

text: trial

text: no

text: Homo sapiens

text: HIV-associated chronic lung disease

text: yes

text: student

text: female

text: human respiratory

text: GGATCGCAGATC

text: sputum

text: 18 mths

text: 15.77 S 35.02 E

text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['0.5', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: no

text: human sputum metagenome

text: Completed

text: Placebo

text: Week 0

text: yes

text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.host-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: FVCZ

characteristic: FVCpcpred

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Abnormal HR

text: Not abnormal

text: Not abnormal

text: no

text: Not Adherent

text: no

text: no

text: no

text: yes

text: no

text: EFV/NVP

text: yes

text: NCBI

text: yes

characteristic: cotrimoxazole

text: yes

characteristic: dateart

characteristic: datehiv

characteristic: dod

characteristic: duryart

characteristic: endfollowup

text: ['NA', 'NA']

text: human

text: respiratory tract

text: sputum

text: black

characteristic: ethnicity

text: Malawi: Blantyre

text: trial

characteristic: group

text: no

text: Homo sapiens

characteristic: host

text: HIV-associated chronic lung disease

text: yes

text: student

text: male

text: human respiratory

text: TCCCAGAACAAC

text: sputum

text: 6 mths

text: 15.77 S 35.02 E

text: yes

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['0.5', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: death

text: no

text: human sputum metagenome

text: Died

text: Placebo

text: Week 0

text: no

text: no

text: no

text: no


text: MIGS/MIMS/MIMARKS.host-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: FEVpcpred

characteristic: FVC

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Not abnormal

characteristic: abnhr

text: Abnormal RR

characteristic: abnrr

text: Abnormal Sat

characteristic: abnsat

text: no

text: Not Adherent

characteristic: adherence

text: no

characteristic: adm

characteristic: ageyart

text: yes

text: no

text: yes

text: no

text: EFV/NVP

characteristic: artreg

text: no

characteristic: attendschool

characteristic: barcode

text: NCBI

characteristic: broker name

text: yes

text: yes

text: ['2018-06-28T00:00:00', '2018-06-28T00:00:00']

characteristic: endtreatdate

characteristic: enrolmonth

text: human

text: respiratory tract

text: sputum

text: black

text: Malawi: Blantyre

text: trial

text: no

text: Homo sapiens

text: HIV-associated chronic lung disease

text: yes

text: male

text: human respiratory

text: CCATTCGCCCAT

text: sputum

text: 18 mths

characteristic: lastvisit

text: 15.77 S 35.02 E

text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['5', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: yes

text: human sputum metagenome

text: Completed

text: Azithromycin

text: Week 0

text: yes

text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.host-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: FEVpcpred

characteristic: FVCZ

characteristic: FVCpcpred

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Not abnormal

text: Not abnormal

text: Not abnormal

text: yes

text: Not Adherent

text: no

text: yes

text: no

text: no

text: yes

text: ATV/LPV/PI

text: no

text: NCBI

text: no

characteristic: cotrimoxazole

text: yes

characteristic: dateart

characteristic: duryart

characteristic: endfollowup

text: ['NA', '2017-10-02T00:00:00']

text: human

text: respiratory tract

text: sputum

text: black

characteristic: ethnicity

text: Malawi: Blantyre

text: trial

characteristic: group

text: no

text: Homo sapiens

characteristic: host

text: HIV-associated chronic lung disease

text: yes

text: male

text: human respiratory

text: TAATGGAGGAAC

text: sputum

text: 18 mths

characteristic: lastvisitdate

text: 15.77 S 35.02 E

text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['5', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: no

text: human sputum metagenome

text: Completed

text: Placebo

text: Week 48

text: yes

text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.host-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: no

text: Not Adherent

characteristic: adherence

text: no

characteristic: adm

characteristic: ageyart

text: no

text: no

text: no

text: yes

text: ATV/LPV/PI

characteristic: artreg

text: yes

characteristic: attendschool

characteristic: barcode

text: NCBI

characteristic: broker name

text: yes

text: yes

characteristic: datehiv

text: ['NA', 'NA']

characteristic: endtreatdate

characteristic: enrolmonth

text: human

text: respiratory tract

text: sputum

text: black

text: Malawi: Blantyre

text: trial

text: no

text: Homo sapiens

text: HIV-associated chronic lung disease

text: yes

text: student

text: male

text: human respiratory

text: GCACTACCGAAT

text: sputum

text: unscheduled

characteristic: lastvisit

text: 15.77 S 35.02 E

text: no

text: yes

text: human sputum metagenome

characteristic: organism

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['5', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

characteristic: smoker

text: LTFU

text: no

text: human sputum metagenome

text: Completed

text: Placebo

text: Week 48

text: yes

text: no

text: no

text: no


text: MIGS/MIMS/MIMARKS.host-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: FEVpcpred

characteristic: FVC

characteristic: FVCZ

characteristic: FVCpcpred

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Not abnormal

characteristic: abnhr

text: Not abnormal

characteristic: abnrr

text: Not abnormal

characteristic: abnsat

text: no

text: Adherent

text: no

text: yes

text: no

text: yes

text: no

text: EFV/NVP

text: yes

text: NCBI

text: yes

characteristic: cotrimoxazole

text: no

characteristic: dateart

characteristic: duryart

characteristic: endfollowup

text: ['NA', '2018-03-28T00:00:00']

text: human

text: respiratory tract

text: sputum

text: black

characteristic: ethnicity

text: Malawi: Blantyre

text: trial

characteristic: group

text: no

text: Homo sapiens

characteristic: host

text: HIV-associated chronic lung disease

text: yes

text: student

text: male

text: human respiratory

text: GCTCAGTGCAGA

text: sputum

text: 18 mths

text: 15.77 S 35.02 E

text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['5', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: no

text: human sputum metagenome

text: Completed

text: Azithromycin

text: Week 48

text: yes

text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.host-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: FEVpcpred

characteristic: FVC

characteristic: FVCZ

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Not abnormal

text: Not abnormal

text: Not abnormal

text: no

text: Adherent

characteristic: adherence

text: no

characteristic: adm

characteristic: ageyart

text: no

text: no

text: yes

text: no

text: EFV/NVP

characteristic: artreg

text: yes

characteristic: attendschool

characteristic: barcode

text: NCBI

characteristic: broker name

text: yes

text: no

characteristic: datehiv

text: ['NA', '2018-05-21T00:00:00']

characteristic: endtreatdate

characteristic: enrolmonth

text: human

text: respiratory tract

text: sputum

text: black

text: Malawi: Blantyre

text: trial

text: no

text: Homo sapiens

text: HIV-associated chronic lung disease

text: yes

text: student

text: female

text: human respiratory

text: CGAGAAGAGAAC

text: sputum

text: 18 mths

text: 15.77 S 35.02 E

text: no

text: yes

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['2', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: no

text: human sputum metagenome

text: Completed

text: Placebo

text: Week 48

text: no

text: no

text: yes

text: no


text: MIGS/MIMS/MIMARKS.host-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: FVCpcpred

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Not abnormal

characteristic: abnhr

text: Not abnormal

characteristic: abnrr

text: Not abnormal

characteristic: abnsat

text: no

text: Not Adherent

text: no

text: yes

text: no

text: yes

text: no

text: EFV/NVP

text: yes

text: NCBI

text: yes

characteristic: cotrimoxazole

text: no

characteristic: dateart

characteristic: duryart

characteristic: endfollowup

text: ['NA', '2018-05-21T00:00:00']

text: human

text: respiratory tract

text: sputum

text: black

characteristic: ethnicity

text: Malawi: Blantyre

text: trial

characteristic: group

text: no

text: Homo sapiens

characteristic: host

text: HIV-associated chronic lung disease

text: yes

text: student

text: female

text: human respiratory

text: GACTTTCCCTCG

text: sputum

text: 18 mths

text: 15.77 S 35.02 E

text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['3', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: no

text: human sputum metagenome

text: Completed

text: Placebo

text: Week 48

text: yes

text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.host-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: FEVpcpred

characteristic: FVC

characteristic: FVCZ

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Not abnormal

text: Not abnormal

text: Not abnormal

text: no

text: Not Adherent

characteristic: adherence

text: no

characteristic: adm

characteristic: ageyart

text: yes

text: no

text: yes

text: no

text: EFV/NVP

characteristic: artreg

text: no

characteristic: attendschool

characteristic: barcode

text: NCBI

characteristic: broker name

text: yes

text: yes

characteristic: datehiv

text: ['NA', '2018-06-28T00:00:00']

characteristic: endtreatdate

characteristic: enrolmonth

text: human

text: respiratory tract

text: sputum

text: black

text: Malawi: Blantyre

text: trial

text: no

text: Homo sapiens

text: HIV-associated chronic lung disease

text: yes

text: male

text: human respiratory

text: CGAGATACCCAG

text: sputum

text: 18 mths

characteristic: lastvisit

text: 15.77 S 35.02 E

text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['2', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: yes

text: human sputum metagenome

text: Completed

text: Azithromycin

text: Week 48

text: yes

text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.host-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: FVCpcpred

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Not abnormal

characteristic: abnhr

text: Not abnormal

characteristic: abnrr

text: Not abnormal

characteristic: abnsat

text: no

text: Adherent

text: no

text: yes

text: no

text: yes

text: no

text: EFV/NVP

text: yes

text: NCBI

text: yes

characteristic: cotrimoxazole

text: no

characteristic: dateart

characteristic: duryart

characteristic: endfollowup

text: ['NA', '2018-03-28T00:00:00']

text: human

text: respiratory tract

text: sputum

text: black

characteristic: ethnicity

text: Malawi: Blantyre

text: trial

characteristic: group

text: no

text: Homo sapiens

characteristic: host

text: HIV-associated chronic lung disease

text: yes

text: student

text: male

text: human respiratory

text: CTACCGGATCAA

text: sputum

text: 18 mths

text: 15.77 S 35.02 E

text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['2', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: no

text: human sputum metagenome

text: Completed

text: Azithromycin

text: Week 72

text: yes

text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.host-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: FEVpcpred

characteristic: FVC

characteristic: FVCZ

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Not abnormal

text: Not abnormal

text: Not abnormal

text: no

text: Adherent

characteristic: adherence

text: no

characteristic: adm

characteristic: ageyart

text: no

text: no

text: yes

text: no

text: EFV/NVP

characteristic: artreg

text: yes

characteristic: attendschool

characteristic: barcode

text: NCBI

characteristic: broker name

text: yes

text: no

characteristic: datehiv

text: ['NA', '2018-05-21T00:00:00']

characteristic: endtreatdate

characteristic: enrolmonth

text: human

text: respiratory tract

text: sputum

text: black

text: Malawi: Blantyre

text: trial

text: no

text: Homo sapiens

text: HIV-associated chronic lung disease

text: yes

text: student

text: female

text: human respiratory

text: ATCGGCGTTACA

text: sputum

text: 18 mths

characteristic: lastvisit

text: 15.77 S 35.02 E

text: no

text: yes

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['1', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: no

text: human sputum metagenome

text: Completed

text: Placebo

text: Week 72

text: no

text: no

text: yes

text: no


text: MIGS/MIMS/MIMARKS.host-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: FVCpcpred

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Not abnormal

characteristic: abnhr

text: Not abnormal

characteristic: abnrr

text: Not abnormal

characteristic: abnsat

text: no

text: Not Adherent

text: no

text: yes

text: no

text: yes

text: no

text: EFV/NVP

text: yes

text: NCBI

text: yes

characteristic: cotrimoxazole

text: no

characteristic: dateart

characteristic: duryart

characteristic: endfollowup

text: ['NA', '2018-05-21T00:00:00']

text: human

text: respiratory tract

text: sputum

text: black

characteristic: ethnicity

text: Malawi: Blantyre

text: trial

characteristic: group

text: no

text: Homo sapiens

characteristic: host

text: HIV-associated chronic lung disease

text: yes

text: student

text: female

text: human respiratory

text: TCTAGCGTAGTG

text: sputum

text: 18 mths

text: 15.77 S 35.02 E

text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['1', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: no

text: human sputum metagenome

text: Completed

text: Placebo

text: Week 72

text: yes

text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.host-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: FEVpcpred

characteristic: FVC

characteristic: FVCZ

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Not abnormal

text: Abnormal RR

text: Not abnormal

text: yes

text: Not Adherent

characteristic: adherence

text: no

characteristic: adm

characteristic: ageyart

text: yes

text: no

text: no

text: yes

text: ATV/LPV/PI

characteristic: artreg

text: no

characteristic: attendschool

characteristic: barcode

text: NCBI

characteristic: broker name

text: no

text: yes

text: ['NA', '2017-10-02T00:00:00']

characteristic: endtreatdate

characteristic: enrolmonth

text: human

text: respiratory tract

text: sputum

text: black

text: Malawi: Blantyre

text: trial

text: no

text: Homo sapiens

text: HIV-associated chronic lung disease

text: yes

text: male

text: human respiratory

text: ACGTGCCGTAGA

text: sputum

text: 18 mths

characteristic: lastvisit

characteristic: lastvisitdate

text: 15.77 S 35.02 E

text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['1', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: no

text: human sputum metagenome

text: Completed

text: Placebo

text: Week 72

text: yes

text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.host-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: FVCpcpred

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Abnormal HR

characteristic: abnhr

text: Abnormal RR

characteristic: abnrr

text: Not abnormal

characteristic: abnsat

text: no

text: Not Adherent

text: no

text: no

text: yes

text: no

text: yes

text: ATV/LPV/PI

text: yes

text: NCBI

text: yes

characteristic: cotrimoxazole

text: no

characteristic: dateart

characteristic: datehiv

characteristic: duryart

characteristic: endfollowup

text: ['NA', '2018-01-10T00:00:00']

text: human

text: respiratory tract

text: sputum

text: black

characteristic: ethnicity

text: Malawi: Blantyre

text: trial

characteristic: group

text: no

text: Homo sapiens

characteristic: host

text: HIV-associated chronic lung disease

text: yes

text: student

text: male

text: human respiratory

text: TACGTCCCGTTC

text: sputum

text: 18 mths

text: 15.77 S 35.02 E

text: no

text: yes

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['1', '']

text: -80 °C

text: no

text: SP

text: induced

text: no

text: no

text: completed 18 months

text: no

text: human sputum metagenome

text: Completed

text: Azithromycin

text: Week 72

text: no

text: yes

text: no

text: no


text: MIGS/MIMS/MIMARKS.host-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: FEVpcpred

characteristic: FVC

characteristic: FVCZ

characteristic: FVCpcpred

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Not abnormal

text: Not abnormal

text: Not abnormal

text: no

text: Not Adherent

characteristic: adherence

text: no

characteristic: adm

characteristic: ageyart

text: no

text: no

text: yes

text: no

text: EFV/NVP

characteristic: artreg

text: yes

characteristic: attendschool

characteristic: barcode

text: NCBI

characteristic: broker name

text: yes

text: yes

text: ['NA', 'NA']

characteristic: endtreatdate

characteristic: enrolmonth

text: human

text: respiratory tract

text: sputum

text: black

text: Malawi: Blantyre

text: trial

text: no

text: Homo sapiens

text: HIV-associated chronic lung disease

text: yes

text: student

text: male

text: human respiratory

text: TAACACCACATC

text: sputum

text: 18 mths

characteristic: lastvisit

text: 15.77 S 35.02 E

text: no

text: yes

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['2', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: no

text: human sputum metagenome

text: Completed

text: Placebo

text: Week 72

text: no

text: yes

text: no

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: no

text: yes

text: no

text: EFV/NVP

text: yes

text: NCBI

text: yes

characteristic: cotrimoxazole

characteristic: dateart

characteristic: datehiv

characteristic: duryart

text: ['NA', 'not applicable']

text: human

text: respiratory tract

text: sputum

text: black

characteristic: ethnicity

text: Zimbabwe: Harare

text: comparison group

characteristic: group

text: Homo sapiens

characteristic: host

text: No HIV-associated chronic lung disease

text: yes

text: student

text: female

text: human respiratory

text: CACGGTTGTGAG

text: sputum

text: 17.82 S 31.04 E

text: yes

text: human sputum metagenome

characteristic: organism

text: HIV-associated chronic lung disease

text: no

text: stored in primestore

text: ['1', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

characteristic: smoker

text: no

characteristic: tbtreat

text: human sputum metagenome

text: Week 0

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: FEVpcpred

characteristic: FVC

characteristic: FVCZ

characteristic: FVCpcpred

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: E

characteristic: WRrepeats

text: E

text: no

characteristic: adm

characteristic: ageyart

text: yes

text: no

text: EFV/NVP

characteristic: artreg

text: yes

characteristic: attendschool

characteristic: barcode

text: NCBI

characteristic: broker name

text: yes

text: COTRIMOXAZOLE

text: ['NA', 'not applicable']

characteristic: endtreatdate

text: human

text: respiratory tract

text: sputum

text: black

text: Zimbabwe: Harare

text: comparison group

text: Homo sapiens

text: No HIV-associated chronic lung disease

text: yes

text: student

text: male

text: human respiratory

text: CACATCTAACAC

text: sputum

text: 17.82 S 31.04 E

text: yes

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: yes

text: COTRIMOXAZOLE

text: stored in primestore

text: ['1', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: no

text: human sputum metagenome

text: Week 0

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: no

text: yes

text: no

text: EFV/NVP

text: yes

text: NCBI

text: yes

characteristic: cotrimoxazole

characteristic: dateart

characteristic: datehiv

characteristic: duryart

text: ['NA', 'not applicable']

text: human

text: respiratory tract

text: sputum

text: black

characteristic: ethnicity

text: Zimbabwe: Harare

text: comparison group

characteristic: group

text: Homo sapiens

characteristic: host

text: No HIV-associated chronic lung disease

text: yes

text: student

text: female

text: human respiratory

text: TGTCTTGATAGC

text: sputum

text: 17.82 S 31.04 E

text: yes

text: human sputum metagenome

characteristic: organism

text: HIV-associated chronic lung disease

text: no

text: stored in primestore

text: ['2', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

characteristic: smoker

text: no

characteristic: tbtreat

text: human sputum metagenome

text: Week 0

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: FEVpcpred

characteristic: FVC

characteristic: FVCZ

characteristic: FVCpcpred

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: no

characteristic: adm

characteristic: ageyart

text: no

text: yes

text: ATV/LPV/PI

characteristic: artreg

text: yes

characteristic: attendschool

characteristic: barcode

text: NCBI

characteristic: broker name

text: yes

text: COTRIMOXAZOLE

text: ['NA', 'not applicable']

characteristic: endtreatdate

text: human

text: respiratory tract

text: sputum

text: black

text: Zimbabwe: Harare

text: comparison group

text: Homo sapiens

text: No HIV-associated chronic lung disease

text: yes

text: student

text: female

text: human respiratory

text: TCCCAACTTCGC

text: sputum

text: 17.82 S 31.04 E

text: yes

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: yes

text: COTRIMOXAZOLE

text: stored in primestore

text: ['2', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: no

text: human sputum metagenome

text: Week 0

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: no

text: yes

text: no

text: EFV/NVP

text: no

text: NCBI

text: yes

characteristic: cotrimoxazole

characteristic: dateart

characteristic: datehiv

text: COTRIMOXAZOLE

characteristic: duryart

text: ['NA', 'not applicable']

text: human

text: respiratory tract

text: sputum

text: black

characteristic: ethnicity

text: Zimbabwe: Harare

text: comparison group

characteristic: group

text: Homo sapiens

characteristic: host

text: No HIV-associated chronic lung disease

text: yes

text: female

text: human respiratory

text: GTGGGATGTTTC

text: sputum

text: 17.82 S 31.04 E

text: yes

text: human sputum metagenome

characteristic: organism

text: HIV-associated chronic lung disease

text: yes

text: COTRIMOXAZOLE

text: stored in primestore

text: ['1', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

characteristic: smoker

text: no

text: human sputum metagenome

text: Week 0

text: no


text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: FEVpcpred

characteristic: FVC

characteristic: FVCZ

characteristic: FVCpcpred

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: no

characteristic: adm

characteristic: ageyart

text: yes

text: no

text: EFV/NVP

characteristic: artreg

text: yes

characteristic: attendschool

characteristic: barcode

text: NCBI

characteristic: broker name

text: yes

text: COTRIMOXAZOLE

text: ['NA', 'not applicable']

characteristic: endtreatdate

text: human

text: respiratory tract

text: sputum

text: black

text: Zimbabwe: Harare

text: comparison group

text: Homo sapiens

text: No HIV-associated chronic lung disease

text: yes

text: student

text: female

text: human respiratory

text: ATGATGACCCGT

text: sputum

text: 17.82 S 31.04 E

text: yes

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: yes

text: COTRIMOXAZOLE

text: stored in primestore

text: ['1', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: no

text: human sputum metagenome

text: Week 0

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: no

text: yes

text: no

text: EFV/NVP

text: yes

text: NCBI

text: yes

characteristic: cotrimoxazole

characteristic: dateart

characteristic: datehiv

text: COTRIMOXAZOLE

characteristic: duryart

text: ['NA', 'not applicable']

text: human

text: respiratory tract

text: sputum

text: black

characteristic: ethnicity

text: Zimbabwe: Harare

text: comparison group

characteristic: group

text: Homo sapiens

characteristic: host

text: No HIV-associated chronic lung disease

text: yes

text: student

text: male

text: human respiratory

text: GAAGAAGCGGTA

text: sputum

text: 17.82 S 31.04 E

text: yes

text: human sputum metagenome

characteristic: organism

text: HIV-associated chronic lung disease

text: yes

text: COTRIMOXAZOLE

text: stored in primestore

text: ['2', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

characteristic: smoker

text: no

text: human sputum metagenome

text: Week 0

text: no


text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: FEVpcpred

characteristic: FVC

characteristic: FVCZ

characteristic: FVCpcpred

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: no

characteristic: adm

characteristic: ageyart

text: yes

text: no

text: EFV/NVP

characteristic: artreg

text: yes

characteristic: attendschool

characteristic: barcode

text: NCBI

characteristic: broker name

text: yes

text: COTRIMOXAZOLE

text: ['NA', 'not applicable']

characteristic: endtreatdate

text: human

text: respiratory tract

text: sputum

text: black

text: Zimbabwe: Harare

text: comparison group

text: Homo sapiens

text: No HIV-associated chronic lung disease

text: yes

text: student

text: male

text: human respiratory

text: AGCAAACACCCG

text: sputum

text: 17.82 S 31.04 E

text: yes

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: yes

text: COTRIMOXAZOLE

text: stored in primestore

text: ['2', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: no

text: human sputum metagenome

text: Week 0

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: no

text: yes

text: no

text: EFV/NVP

text: yes

text: NCBI

text: no

characteristic: cotrimoxazole

characteristic: dateart

characteristic: datehiv

characteristic: duryart

text: ['NA', 'not applicable']

text: human

text: respiratory tract

text: sputum

text: black

characteristic: ethnicity

text: Zimbabwe: Harare

text: comparison group

characteristic: group

text: Homo sapiens

characteristic: host

text: No HIV-associated chronic lung disease

text: yes

text: student

text: female

text: human respiratory

text: ACACAAAGGGAG

text: sputum

text: 17.82 S 31.04 E

text: yes

text: human sputum metagenome

characteristic: organism

text: HIV-associated chronic lung disease

text: no

text: stored in primestore

text: ['1', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

characteristic: smoker

text: no

characteristic: tbtreat

text: human sputum metagenome

text: Week 0

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: FEVpcpred

characteristic: FVC

characteristic: FVCZ

characteristic: FVCpcpred

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: no

characteristic: adm

characteristic: ageyart

text: yes

text: no

text: EFV/NVP

characteristic: artreg

text: yes

characteristic: attendschool

characteristic: barcode

text: NCBI

characteristic: broker name

text: yes

text: COTRIMOXAZOLE

text: ['NA', 'not applicable']

characteristic: endtreatdate

text: human

text: respiratory tract

text: sputum

text: black

text: Zimbabwe: Harare

text: comparison group

text: Homo sapiens

text: No HIV-associated chronic lung disease

text: yes

text: student

text: female

text: human respiratory

text: GTCATTCACGAG

text: sputum

text: 17.82 S 31.04 E

text: yes

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: yes

text: COTRIMOXAZOLE

text: stored in primestore

text: ['2', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: no

text: human sputum metagenome

text: Week 0

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: no

text: yes

text: no

text: EFV/NVP

text: yes

text: NCBI

text: yes

characteristic: cotrimoxazole

characteristic: dateart

characteristic: datehiv

text: COTRIMOXAZOLE

characteristic: duryart

text: ['NA', 'not applicable']

text: human

text: respiratory tract

text: sputum

text: black

characteristic: ethnicity

text: Zimbabwe: Harare

text: comparison group

characteristic: group

text: Homo sapiens

characteristic: host

text: No HIV-associated chronic lung disease

text: yes

text: student

text: male

text: human respiratory

text: TAAGGCCTATCG

text: sputum

text: 17.82 S 31.04 E

text: yes

text: human sputum metagenome

characteristic: organism

text: HIV-associated chronic lung disease

text: yes

text: COTRIMOXAZOLE

text: stored in primestore

text: ['2', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

characteristic: smoker

text: no

text: human sputum metagenome

text: Week 0

text: no


text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: FEVpcpred

characteristic: FVC

characteristic: FVCZ

characteristic: FVCpcpred

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: no

characteristic: adm

characteristic: ageyart

text: yes

text: no

text: EFV/NVP

characteristic: artreg

text: yes

characteristic: attendschool

characteristic: barcode

text: NCBI

characteristic: broker name

text: yes

text: ['NA', 'not applicable']

characteristic: endtreatdate

text: human

text: respiratory tract

text: sputum

text: black

text: Zimbabwe: Harare

text: comparison group

text: Homo sapiens

text: No HIV-associated chronic lung disease

text: yes

text: student

text: male

text: human respiratory

text: GTATGCGCTGTA

text: sputum

text: 17.82 S 31.04 E

text: yes

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: stored in primestore

text: ['1', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: no

characteristic: tbtreat

text: human sputum metagenome

text: Week 0

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: no

text: yes

text: no

text: EFV/NVP

text: yes

text: NCBI

text: yes

characteristic: cotrimoxazole

characteristic: dateart

characteristic: datehiv

text: COTRIMOXAZOLE

characteristic: duryart

text: ['NA', 'not applicable']

text: human

text: respiratory tract

text: sputum

text: black

characteristic: ethnicity

text: Zimbabwe: Harare

text: comparison group

characteristic: group

text: Homo sapiens

characteristic: host

text: No HIV-associated chronic lung disease

text: yes

text: student

text: female

text: human respiratory

text: TAACAAGGAACG

text: sputum

text: 17.82 S 31.04 E

text: yes

text: human sputum metagenome

characteristic: organism

text: HIV-associated chronic lung disease

text: yes

text: COTRIMOXAZOLE

text: stored in primestore

text: ['2', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

characteristic: smoker

text: no

text: human sputum metagenome

text: Week 0

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: FEVpcpred

characteristic: FVC

characteristic: FVCZ

characteristic: FVCpcpred

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: no

characteristic: adm

characteristic: ageyart

text: yes

text: no

text: EFV/NVP

characteristic: artreg

text: yes

characteristic: attendschool

characteristic: barcode

text: NCBI

characteristic: broker name

text: yes

text: COTRIMOXAZOLE

text: ['NA', 'not applicable']

characteristic: endtreatdate

text: human

text: respiratory tract

text: sputum

text: black

text: Zimbabwe: Harare

text: comparison group

text: Homo sapiens

text: No HIV-associated chronic lung disease

text: yes

text: student

text: female

text: human respiratory

text: AGATAGGACAGG

text: sputum

text: 17.82 S 31.04 E

text: yes

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: yes

text: COTRIMOXAZOLE

text: stored in primestore

text: ['1', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: no

text: human sputum metagenome

text: Week 0

text: no


text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

characteristic: DOB

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: no

text: yes

text: no

text: EFV/NVP

text: yes

text: NCBI

text: yes

characteristic: cotrimoxazole

characteristic: dateart

characteristic: datehiv

text: COTRIMOXAZOLE

characteristic: duryart

text: ['NA', 'not applicable']

text: human

text: respiratory tract

text: sputum

text: black

characteristic: ethnicity

text: Zimbabwe: Harare

text: comparison group

characteristic: group

text: Homo sapiens

characteristic: host

text: No HIV-associated chronic lung disease

text: yes

text: student

text: female

text: human respiratory

text: GCACACACGTTA

text: sputum

text: 17.82 S 31.04 E

text: yes

text: human sputum metagenome

characteristic: organism

text: HIV-associated chronic lung disease

text: yes

text: COTRIMOXAZOLE

text: stored in primestore

text: ['1', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

characteristic: smoker

text: no

text: human sputum metagenome

text: Week 0

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: FEVpcpred

characteristic: FVC

characteristic: FVCZ

characteristic: FVCpcpred

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: no

characteristic: adm

characteristic: ageyart

text: yes

text: no

text: EFV/NVP

characteristic: artreg

text: yes

characteristic: attendschool

characteristic: barcode

text: NCBI

characteristic: broker name

text: no

text: ['NA', 'not applicable']

characteristic: endtreatdate

text: human

text: respiratory tract

text: sputum

text: black

text: Zimbabwe: Harare

text: comparison group

text: Homo sapiens

text: No HIV-associated chronic lung disease

text: yes

text: student

text: female

text: human respiratory

text: CTTCGGCAGAAT

text: sputum

text: 17.82 S 31.04 E

text: yes

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: stored in primestore

text: ['2', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: yes

characteristic: tbtreat

text: human sputum metagenome

text: Week 0

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: no

text: yes

text: no

text: EFV/NVP

text: no

text: NCBI

text: no

characteristic: cotrimoxazole

characteristic: dateart

characteristic: datehiv

characteristic: duryart

text: ['NA', 'not applicable']

text: human

text: respiratory tract

text: sputum

text: black

characteristic: ethnicity

text: Zimbabwe: Harare

text: comparison group

characteristic: group

text: Homo sapiens

characteristic: host

text: No HIV-associated chronic lung disease

text: yes

text: male

text: human respiratory

text: GATCTTCAGTAC

text: sputum

text: 17.82 S 31.04 E

text: yes

text: human sputum metagenome

characteristic: organism

text: HIV-associated chronic lung disease

text: no

text: stored in primestore

text: ['1', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

characteristic: smoker

text: no

text: human sputum metagenome

text: Week 0

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: FEVpcpred

characteristic: FVC

characteristic: FVCZ

characteristic: FVCpcpred

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: no

characteristic: adm

characteristic: ageyart

text: yes

text: no

text: EFV/NVP

characteristic: artreg

text: no

characteristic: attendschool

characteristic: barcode

text: NCBI

characteristic: broker name

text: no

text: ['NA', 'not applicable']

characteristic: endtreatdate

text: human

text: respiratory tract

text: sputum

text: black

text: Zimbabwe: Harare

text: comparison group

text: Homo sapiens

text: No HIV-associated chronic lung disease

text: yes

text: female

text: human respiratory

text: GACACATTTCTG

text: sputum

text: 17.82 S 31.04 E

text: yes

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: stored in primestore

text: ['1', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: no

characteristic: tbtreat

text: human sputum metagenome

text: Week 0

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: no

text: yes

text: no

text: EFV/NVP

text: no

text: NCBI

text: yes

characteristic: cotrimoxazole

characteristic: dateart

characteristic: datehiv

text: COTRIMOXAZOLE

characteristic: duryart

text: ['NA', 'not applicable']

text: human

text: respiratory tract

text: sputum

text: black

characteristic: ethnicity

text: Zimbabwe: Harare

text: comparison group

characteristic: group

text: Homo sapiens

characteristic: host

text: No HIV-associated chronic lung disease

text: yes

text: female

text: human respiratory

text: CGTTTAGAGTCG

text: sputum

text: 17.82 S 31.04 E

text: yes

text: human sputum metagenome

characteristic: organism

text: HIV-associated chronic lung disease

text: yes

text: COTRIMOXAZOLE

text: stored in primestore

text: ['1.5', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

characteristic: smoker

text: no

text: human sputum metagenome

text: Week 0

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: FEVpcpred

characteristic: FVC

characteristic: FVCZ

characteristic: FVCpcpred

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Not abnormal

characteristic: abnhr

text: Not abnormal

characteristic: abnrr

text: Not abnormal

characteristic: abnsat

text: no

text: Adherent

characteristic: adherence

text: no

characteristic: adm

characteristic: ageyart

text: yes

text: no

text: yes

text: no

text: EFV/NVP

characteristic: artreg

text: yes

characteristic: attendschool

characteristic: barcode

text: NCBI

characteristic: broker name

text: yes

text: yes

characteristic: endfollowup

text: ['2018-07-02T00:00:00', '2018-07-02T00:00:00']

characteristic: endtreatdate

characteristic: enrolmonth

text: human

text: respiratory tract

text: sputum

text: black

text: Malawi: Blantyre

text: trial

text: no

text: Homo sapiens

text: HIV-associated chronic lung disease

text: yes

text: student

text: female

text: human respiratory

text: ACAAGGAGGTGA

text: sputum

text: 18 mths

text: 15.77 S 35.02 E

text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['0.5', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: yes

text: human sputum metagenome

text: Completed

text: Azithromycin

text: Week 0

text: yes

text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: FEVpcpred

characteristic: FVC

characteristic: FVCZ

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Not abnormal

text: Not abnormal

text: Not abnormal

text: no

text: Adherent

text: no

text: yes

text: no

text: yes

text: no

text: EFV/NVP

text: yes

text: NCBI

text: yes

characteristic: cotrimoxazole

text: no

characteristic: dateart

characteristic: datehiv

characteristic: duryart

text: ['2018-07-12T00:00:00', '2018-07-12T00:00:00']

text: human

text: respiratory tract

text: sputum

text: black

characteristic: ethnicity

text: Malawi: Blantyre

text: trial

characteristic: group

text: no

text: Homo sapiens

characteristic: host

text: HIV-associated chronic lung disease

text: yes

text: student

text: female

text: human respiratory

text: CGTAACCAACCA

text: sputum

text: 18 mths

text: 15.77 S 35.02 E

text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['5', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: no

text: human sputum metagenome

text: Completed

text: Azithromycin

text: Week 0

text: yes

text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: FVCpcpred

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Not abnormal

characteristic: abnhr

text: Abnormal RR

characteristic: abnrr

text: Not abnormal

characteristic: abnsat

text: no

text: Not Adherent

characteristic: adherence

text: no

characteristic: adm

characteristic: ageyart

text: yes

text: no

text: yes

text: no

text: EFV/NVP

characteristic: artreg

text: yes

characteristic: attendschool

characteristic: barcode

text: NCBI

characteristic: broker name

text: yes

text: no

characteristic: endfollowup

text: ['2018-08-22T00:00:00', '2018-08-22T00:00:00']

characteristic: endtreatdate

characteristic: enrolmonth

text: human

text: respiratory tract

text: sputum

text: black

text: Malawi: Blantyre

text: trial

text: no

text: Homo sapiens

text: HIV-associated chronic lung disease

text: yes

text: student

text: female

text: human respiratory

text: GAGTATGCAGCC

text: sputum

text: 18 mths

text: 15.77 S 35.02 E

text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['2', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: no

text: human sputum metagenome

text: Completed

text: Placebo

text: Week 0

text: yes

text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: FEVpcpred

characteristic: FVC

characteristic: FVCZ

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Not abnormal

text: Not abnormal

text: Not abnormal

text: no

text: Not Adherent

text: no

text: yes

text: no

text: no

text: yes

text: ATV/LPV/PI

text: yes

text: NCBI

text: yes

characteristic: cotrimoxazole

text: no

characteristic: dateart

characteristic: datehiv

characteristic: duryart

text: ['2018-11-12T00:00:00', '2018-11-12T00:00:00']

text: human

text: respiratory tract

text: sputum

text: black

characteristic: ethnicity

text: Malawi: Blantyre

text: trial

characteristic: group

text: no

text: Homo sapiens

characteristic: host

text: HIV-associated chronic lung disease

text: yes

text: student

text: male

text: human respiratory

text: CAGCTAGAACGC

text: sputum

text: 18 mths

text: 15.77 S 35.02 E

text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['1', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: yes

text: human sputum metagenome

text: Completed

text: Placebo

text: Week 0

text: yes

text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: FVCpcpred

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Not abnormal

characteristic: abnhr

text: Not abnormal

characteristic: abnrr

text: Not abnormal

characteristic: abnsat

text: no

text: Adherent

characteristic: adherence

text: yes

text: no

characteristic: barcode

text: NCBI

characteristic: broker name

text: ['2018-08-27T00:00:00', 'missing']

characteristic: endtreatdate

text: human

text: respiratory tract

text: sputum

text: black

text: Malawi: Blantyre

text: trial

text: no

text: Homo sapiens

text: HIV-associated chronic lung disease

text: yes

text: human respiratory

text: TAACGCTTGGGT

text: sputum

text: 15.77 S 35.02 E

text: no

text: no

text: human sputum metagenome

characteristic: organism

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['5', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

characteristic: smoker

text: human sputum metagenome

characteristic: title

text: Azithromycin

text: Week 0

characteristic: visit

text: yes

text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: External Id

characteristic: FEVpcpred

characteristic: FVC

characteristic: FVCZ

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Not abnormal

text: Not abnormal

text: Not abnormal

text: no

text: Not Adherent

text: yes

text: no

text: NCBI

text: ['2018-03-29T00:00:00', 'missing']

text: human

text: respiratory tract

text: sputum

text: black

characteristic: ethnicity

text: Malawi: Blantyre

text: trial

characteristic: group

text: no

text: Homo sapiens

characteristic: host

text: HIV-associated chronic lung disease

text: yes

text: human respiratory

text: TACGGTATGTCT

text: sputum

text: 15.77 S 35.02 E

text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['5', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: human sputum metagenome

text: Azithromycin

text: Week 0

text: yes

text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: FVCpcpred

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: Not abnormal

characteristic: abnhr

text: Not abnormal

characteristic: abnrr

text: Not abnormal

characteristic: abnsat

text: no

text: Not Adherent

characteristic: adherence

text: no

characteristic: adm

characteristic: ageyart

text: yes

text: no

text: yes

text: no

text: EFV/NVP

characteristic: artreg

text: yes

characteristic: attendschool

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text: NCBI

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text: no

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characteristic: datehiv

characteristic: duryart

characteristic: endfollowup

text: ['2018-11-05T00:00:00', '2018-11-05T00:00:00']

characteristic: endtreatdate

characteristic: enrolmonth

text: human

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text: sputum

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text: no

text: Homo sapiens

text: HIV-associated chronic lung disease

text: yes

text: student

text: female

text: human respiratory

text: CAGGCGTATTGG

text: sputum

text: 15 mths

text: 15.77 S 35.02 E

text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['5', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: no

text: human sputum metagenome

text: Completed

text: Azithromycin

text: Week 0

text: yes

text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

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characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

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characteristic: FVCpcpred

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text: public

characteristic: INSDC status

characteristic: SRA accession

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characteristic: abnhr

text: Not abnormal

text: Not abnormal

text: no

text: Not Adherent

text: no

text: yes

text: no

text: yes

text: no

text: EFV/NVP

text: yes

text: NCBI

text: no

text: no

text: human

text: respiratory tract

text: sputum

text: black

characteristic: ethnicity

text: Malawi: Blantyre

text: trial

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text: yes

text: Homo sapiens

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text: HIV-associated chronic lung disease

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text: female

text: human respiratory

text: ACTATTGTCACG

text: sputum

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text: 15.77 S 35.02 E

text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: severe anaemia

text: no

text: stored in primestore

text: ['5', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: no

text: human sputum metagenome

text: Completed

text: Placebo

text: Week 0

text: yes

text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: Not abnormal

text: Abnormal RR

characteristic: abnrr

text: Not abnormal

characteristic: abnsat

text: no

text: Adherent

characteristic: adherence

text: no

characteristic: adm

characteristic: ageyart

text: no

text: no

text: yes

text: no

text: EFV/NVP

characteristic: artreg

text: yes

characteristic: attendschool

characteristic: barcode

text: NCBI

characteristic: broker name

text: yes

characteristic: cotrimoxazole

text: no

characteristic: dateart

characteristic: datehiv

characteristic: duryart

characteristic: endfollowup

text: ['2018-12-31T00:00:00', '2018-12-31T00:00:00']

characteristic: endtreatdate

characteristic: enrolmonth

text: human

text: respiratory tract

text: sputum

text: black

text: Malawi: Blantyre

text: trial

text: no

text: Homo sapiens

text: HIV-associated chronic lung disease

text: yes

text: student

text: male

text: human respiratory

text: TCGCATGAAGTC

text: sputum

text: 12 mths

text: 15.77 S 35.02 E

text: no

text: yes

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['1', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: study ended

text: no

text: human sputum metagenome

text: Completed

text: Placebo

text: Week 0

text: yes

text: no

text: no

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: FEVpcpred

characteristic: FVC

characteristic: FVCZ

characteristic: FVCpcpred

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Not abnormal

characteristic: abnhr

text: Abnormal RR

text: Not abnormal

text: no

text: Not Adherent

text: yes

text: no

text: NCBI

text: ['2018-12-31T00:00:00', 'missing']

text: human

text: respiratory tract

text: sputum

text: black

characteristic: ethnicity

text: Malawi: Blantyre

text: trial

characteristic: group

text: no

text: Homo sapiens

characteristic: host

text: HIV-associated chronic lung disease

text: yes

text: human respiratory

text: AAGGAGCGCCTT

text: sputum

text: 15.77 S 35.02 E

text: no

text: no

text: human sputum metagenome

characteristic: organism

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['1', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

characteristic: smoker

text: human sputum metagenome

characteristic: title

text: Azithromycin

text: Week 0

characteristic: visit

text: yes

text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: FEVpcpred

characteristic: FVC

characteristic: FVCZ

text: public

text: Not abnormal

text: Abnormal RR

characteristic: abnrr

text: Not abnormal

characteristic: abnsat

text: no

text: Not Adherent

characteristic: adherence

text: no

characteristic: adm

text: no

text: no

text: yes

text: no

text: EFV/NVP

characteristic: artreg

text: no

characteristic: attendschool

characteristic: barcode

text: NCBI

characteristic: broker name

text: yes

characteristic: cotrimoxazole

text: no

characteristic: endfollowup

text: ['2018-07-16T00:00:00', '2018-07-16T00:00:00']

characteristic: endtreatdate

characteristic: enrolmonth

text: human

text: respiratory tract

text: sputum

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text: Malawi: Blantyre

text: trial

text: no

text: Homo sapiens

text: HIV-associated chronic lung disease

text: yes

text: male

text: human respiratory

text: GTCTCATGTAGG

text: sputum

text: 6 mths

characteristic: lastvisit

characteristic: lastvisitdate

text: 15.77 S 35.02 E

text: yes

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['0.5', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: LTFU

text: no

text: human sputum metagenome

text: Defaulted

text: Placebo

text: Week 0

text: no

text: no

text: no

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: FEVpcpred

characteristic: FVCpcpred

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Not abnormal

characteristic: abnhr

text: Not abnormal

text: Not abnormal

text: no

text: Adherent

text: no

characteristic: ageyart

text: no

text: no

text: yes

text: no

text: EFV/NVP

text: yes

text: NCBI

text: yes

text: no

characteristic: dateart

characteristic: datehiv

characteristic: duryart

text: ['2019-01-07T00:00:00', '2019-01-07T00:00:00']

text: human

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text: sputum

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characteristic: ethnicity

text: Malawi: Blantyre

text: trial

characteristic: group

text: no

text: Homo sapiens

characteristic: host

text: HIV-associated chronic lung disease

text: yes

text: student

text: male

text: human respiratory

text: TTAGGTGCAGCT

text: sputum

text: 15 mths

text: 15.77 S 35.02 E

text: no

text: yes

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['1', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: study ended

text: no

text: human sputum metagenome

text: Completed

text: Placebo

text: Week 0

text: yes

text: no

text: no

text: no


text: X

characteristic: BRrepeats

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: FEVpcpred

characteristic: FVC

characteristic: FVCZ

text: public

text: Not abnormal

text: Not abnormal

characteristic: abnrr

text: Not abnormal

characteristic: abnsat

text: no

text: Not Adherent

characteristic: adherence

text: no

characteristic: adm

text: no

text: no

text: yes

text: no

text: EFV/NVP

characteristic: artreg

text: yes

characteristic: attendschool

characteristic: barcode

text: NCBI

characteristic: broker name

text: yes

characteristic: cotrimoxazole

text: no

characteristic: endfollowup

characteristic: endtreatdate

characteristic: enrolmonth

text: human

text: respiratory tract

text: sputum

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text: Malawi: Blantyre

text: trial

text: no

text: Homo sapiens

text: HIV-associated chronic lung disease

text: yes

text: student

text: female

text: human respiratory

text: CCTCGTTCGACT

text: sputum

text: 18 mths

text: 15.77 S 35.02 E

text: no

text: yes

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['1', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: no

text: human sputum metagenome

text: Completed

text: Azithromycin

text: Week 0

text: yes

text: no

text: no

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: FVCpcpred

characteristic: INSDC center alias

characteristic: INSDC center name

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characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Not abnormal

characteristic: abnhr

text: Not abnormal

text: Not abnormal

text: no

text: Not Adherent

text: no

characteristic: ageyart

text: yes

text: no

text: yes

text: no

text: EFV/NVP

text: yes

text: NCBI

text: no

characteristic: dateart

characteristic: datehiv

characteristic: duryart

text: ['2019-01-14T00:00:00', '2019-01-14T00:00:00']

text: human

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characteristic: ethnicity

text: Malawi: Blantyre

text: trial

characteristic: group

text: no

text: Homo sapiens

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text: HIV-associated chronic lung disease

text: yes

text: student

text: female

text: human respiratory

text: ATCGCTCGAGGA

text: sputum

text: 18 mths

characteristic: lastvisit

text: 15.77 S 35.02 E

text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['1', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: no

text: human sputum metagenome

text: Completed

text: Azithromycin

text: Week 0

text: yes

text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: FEVpcpred

characteristic: FVC

characteristic: FVCZ

characteristic: FVCpcpred

text: public

text: Not abnormal

text: Not abnormal

characteristic: abnrr

text: Not abnormal

characteristic: abnsat

text: no

text: Not Adherent

characteristic: adherence

text: no

characteristic: adm

text: no

text: no

text: yes

text: no

text: EFV/NVP

characteristic: artreg

text: yes

characteristic: attendschool

characteristic: barcode

text: NCBI

characteristic: broker name

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characteristic: cotrimoxazole

text: no

characteristic: endfollowup

characteristic: endtreatdate

characteristic: enrolmonth

text: human

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text: Homo sapiens

text: HIV-associated chronic lung disease

text: yes

text: student

text: female

text: human respiratory

text: AATTAGGCAGAG

text: sputum

text: 18 mths

text: 15.77 S 35.02 E

text: no

text: yes

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['1', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: no

text: human sputum metagenome

text: Completed

text: Azithromycin

text: Week 0

text: yes

text: no

text: no

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

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characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

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characteristic: abnhr

text: Not abnormal

text: Not abnormal

text: no

text: Adherent

text: yes

characteristic: ageyart

text: no

text: no

text: yes

text: no

text: EFV/NVP

text: NCBI

text: no

text: no

characteristic: dateart

characteristic: datehiv

characteristic: duryart

text: ['2019-04-10T00:00:00', '2019-04-10T00:00:00']

text: human

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characteristic: ethnicity

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text: no

text: Homo sapiens

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text: HIV-associated chronic lung disease

text: yes

text: female

text: human respiratory

text: ATCCCGAATTTG

text: sputum

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characteristic: lastvisit

characteristic: lastvisitdate

text: 15.77 S 35.02 E

text: yes

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['1', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: study ended

text: no

text: human sputum metagenome

text: Completed

text: Azithromycin

text: Week 0

text: no

text: no

text: no

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: FEVpcpred

characteristic: FVC

characteristic: FVCZ

characteristic: FVCpcpred

characteristic: INSDC center alias

text: public

text: Not abnormal

text: Not abnormal

characteristic: abnrr

text: Not abnormal

characteristic: abnsat

text: no

text: Not Adherent

characteristic: adherence

text: no

characteristic: adm

text: no

text: no

text: yes

text: no

text: EFV/NVP

characteristic: artreg

text: yes

characteristic: attendschool

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characteristic: broker name

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characteristic: cotrimoxazole

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characteristic: endfollowup

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characteristic: endtreatdate

characteristic: enrolmonth

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text: Homo sapiens

text: HIV-associated chronic lung disease

text: yes

text: student

text: female

text: human respiratory

text: AGGATTACTCCG

text: sputum

text: 15 mths

text: 15.77 S 35.02 E

text: no

text: yes

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['5', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: study ended

text: no

text: human sputum metagenome

text: Completed

text: Azithromycin

text: Week 0

text: yes

text: no

text: no

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

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characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: AAH

characteristic: WRrepeats

text: AAH

text: Not abnormal

characteristic: abnhr

text: Not abnormal

text: Not abnormal

text: no

text: Adherent

text: no

characteristic: ageyart

text: no

text: no

text: yes

text: no

text: EFV/NVP

text: yes

text: NCBI

text: yes

text: no

characteristic: dateart

characteristic: datehiv

characteristic: duryart

text: ['2019-02-25T00:00:00', '2019-02-25T00:00:00']

text: human

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characteristic: ethnicity

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text: HIV-associated chronic lung disease

text: yes

text: student

text: male

text: human respiratory

text: GCTGGGTCATAT

text: sputum

text: 15 mths

text: 15.77 S 35.02 E

text: no

text: yes

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['5', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: study ended

text: no

text: human sputum metagenome

text: Completed

text: Azithromycin

text: Week 0

text: yes

text: no

text: no

text: no


text: MIGS/MIMS/MIMARKS.human-associated

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text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: FVC

characteristic: FVCZ

characteristic: FVCpcpred

characteristic: INSDC center alias

text: public

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text: Not abnormal

characteristic: abnrr

text: Not abnormal

characteristic: abnsat

text: no

text: Adherent

characteristic: adherence

text: no

text: no

characteristic: barcode

text: NCBI

characteristic: broker name

text: ['2019-03-14T00:00:00', 'missing']

characteristic: endtreatdate

text: human

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text: Malawi: Blantyre

text: trial

text: no

text: Homo sapiens

text: HIV-associated chronic lung disease

text: yes

text: human respiratory

text: CGCATGAGGATC

text: sputum

text: 15.77 S 35.02 E

text: no

text: yes

text: human sputum metagenome

characteristic: organism

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['2', '']

text: -80 °C

text: no

text: SP

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text: no

text: no

characteristic: smoker

text: human sputum metagenome

characteristic: title

text: Azithromycin

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text: Not abnormal

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text: no

characteristic: adm

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text: no

text: no

text: no

text: yes

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text: yes

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text: 15.77 S 35.02 E

text: no

text: yes

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text: HIV-associated chronic lung disease

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text: yes

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text: no

text: no


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text: Not abnormal

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text: no

text: no


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text: no

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text: no

text: no


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text: yes

text: yes

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text: public

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text: no

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text: human sputum metagenome

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text: yes

text: no