text: MIGS/MIMS/MIMARKS.human-associated

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characteristic: External Id

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characteristic: INSDC last update

text: public

text: no

text: Not Adherent

text: no

text: yes

text: no

text: yes

text: no

text: EFV/NVP

text: no

text: NCBI

text: yes

text: no

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text: COTRIMOXAZOLE

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characteristic: endfollowup

text: ['NA', '2018-01-26T00:00:00']

characteristic: endtreatdate

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text: human

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text: Zimbabwe: Harare

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characteristic: lastvisit

characteristic: lastvisitdate

text: 17.82 S 31.04 E

text: no

text: no

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text: no

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text: stored in primestore

text: ['1', '']

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status: PUBLIC

text: MIGS/MIMS/MIMARKS.human-associated

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text: public

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text: yes

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text: ['NA', '2017-09-08T00:00:00']

text: human

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text: yes

text: student

text: male

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text: 17.82 S 31.04 E

text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

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text: ['1', '']

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text: MIGS/MIMS/MIMARKS.human-associated

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text: MIMARKS.survey

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text: public

text: Abnormal HR

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text: ['2', '']

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text: MIGS/MIMS/MIMARKS.human-associated

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text: Not abnormal

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text: Not abnormal

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text: no

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text: MIGS/MIMS/MIMARKS.human-associated

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text: MIMARKS.survey

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text: public

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text: AGTAGAGGGATG

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text: no

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text: MIGS/MIMS/MIMARKS.human-associated

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text: no

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text: MIGS/MIMS/MIMARKS.human-associated

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text: MIMARKS.survey

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text: MIMARKS.survey

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text: Not abnormal

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text: LTFU

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text: yes

text: no

text: no

text: no


text: MIGS/MIMS/MIMARKS.human-associated

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text: MIMARKS.survey

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text: public

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text: no

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text: stored in primestore

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text: MIGS/MIMS/MIMARKS.human-associated

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text: MIMARKS.survey

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characteristic: ENA-FIRST-PUBLIC

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text: Not abnormal

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characteristic: lastvisit

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text: human sputum metagenome

text: Completed

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text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.human-associated

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text: MIMARKS.survey

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text: GTTTCTAGAGCT

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text: 17.82 S 31.04 E

text: no

text: no

text: human sputum metagenome

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text: yes

text: COTRIMOXAZOLE

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text: ['1', '']

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text: human sputum metagenome

text: Completed

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text: yes

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text: MIGS/MIMS/MIMARKS.human-associated

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text: MIMARKS.survey

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characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

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text: female

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text: sputum

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text: 17.82 S 31.04 E

text: no

text: no

text: human sputum metagenome

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text: no

text: yes

text: COTRIMOXAZOLE

text: stored in primestore

text: ['1.5', '']

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text: yes

text: yes

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text: MIGS/MIMS/MIMARKS.human-associated

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text: MIMARKS.survey

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text: 17.82 S 31.04 E

text: no

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text: human sputum metagenome

text: HIV-associated chronic lung disease

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text: MIGS/MIMS/MIMARKS.human-associated

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text: sputum

text: 18 mths

text: 17.82 S 31.04 E

text: no

text: yes

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: yes

text: COTRIMOXAZOLE

text: stored in primestore

text: ['1.5', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: no

text: human sputum metagenome

text: Completed

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text: no

text: no

text: no


text: MIGS/MIMS/MIMARKS.human-associated

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text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

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characteristic: FVCpcpred

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characteristic: INSDC last update

text: public

text: S

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text: S

text: Abnormal HR

text: Not abnormal

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text: no

text: yes

text: no

text: yes

text: no

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text: NCBI

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characteristic: dateart

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characteristic: endfollowup

text: ['NA', '2017-11-03T00:00:00']

characteristic: endtreatdate

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characteristic: ethnicity

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text: HIV-associated chronic lung disease

text: yes

text: male

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text: ACATCCGCGAAG

text: sputum

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text: 17.82 S 31.04 E

text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['2', '']

text: -80 °C

text: no

text: SP

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text: no

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text: completed 18 months

text: no

text: human sputum metagenome

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text: yes

text: yes

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text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

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text: public

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characteristic: Submitter Id

text: Not abnormal

characteristic: abnhr

text: Not abnormal

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text: Not abnormal

characteristic: abnsat

text: no

text: Adherent

characteristic: adherence

text: no

characteristic: adm

characteristic: ageyart

text: yes

text: no

text: yes

text: no

text: EFV/NVP

characteristic: artreg

text: yes

characteristic: attendschool

characteristic: barcode

text: NCBI

characteristic: broker name

text: no

characteristic: cotrimoxazole

text: no

characteristic: datehiv

text: ['NA', '2018-05-17T00:00:00']

text: human

text: respiratory tract

text: sputum

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text: trial

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text: Homo sapiens

text: HIV-associated chronic lung disease

text: yes

text: student

text: male

text: human respiratory

text: TCCAGGCTTAAT

text: sputum

text: 18 mths

text: 17.82 S 31.04 E

text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['1.5', '']

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text: yes

text: yes

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text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

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characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Not abnormal

text: Abnormal RR

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text: yes

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text: COTRIMOXAZOLE

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text: human respiratory

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text: sputum

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characteristic: lastvisit

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text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: yes

text: COTRIMOXAZOLE

text: stored in primestore

text: ['2', '']

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text: human sputum metagenome

text: Completed

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text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

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text: public

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text: Not abnormal

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text: Abnormal RR

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text: Not abnormal

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text: Adherent

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text: no

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text: COTRIMOXAZOLE

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text: respiratory tract

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text: human respiratory

text: AGGCTTTCGTAG

text: sputum

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characteristic: lastvisitdate

text: 17.82 S 31.04 E

text: no

text: yes

text: human sputum metagenome

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text: no

text: yes

text: COTRIMOXAZOLE

text: stored in primestore

text: ['1', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: no

text: human sputum metagenome

text: Completed

text: Placebo

text: Week 72

text: no

text: no

text: yes

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

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characteristic: FVCZ

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characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: T

characteristic: WRrepeats

text: T

text: Not abnormal

text: Abnormal RR

text: Not abnormal

text: no

text: Adherent

text: no

text: yes

text: no

text: no

text: yes

text: ATV/LPV/PI

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text: NCBI

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text: no

characteristic: dateart

characteristic: datehiv

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characteristic: endfollowup

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text: HIV-associated chronic lung disease

text: yes

text: male

text: human respiratory

text: TTCGCCCTTCAG

text: sputum

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text: 17.82 S 31.04 E

text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: yes

text: COTRIMOXAZOLE

text: stored in primestore

text: ['1.5', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

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text: completed 18 months

text: yes

text: human sputum metagenome

text: Completed

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text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: FEVpcpred

characteristic: FVC

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Not abnormal

characteristic: abnhr

text: Abnormal RR

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text: Not abnormal

characteristic: abnsat

text: no

text: Not Adherent

characteristic: adherence

text: no

characteristic: adm

characteristic: ageyart

text: yes

text: no

text: yes

text: no

text: EFV/NVP

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text: no

characteristic: attendschool

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characteristic: broker name

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characteristic: cotrimoxazole

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text: COTRIMOXAZOLE

text: ['NA', '2018-01-26T00:00:00']

text: human

text: respiratory tract

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text: trial

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text: Homo sapiens

text: HIV-associated chronic lung disease

text: yes

text: male

text: human respiratory

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text: sputum

text: 18 mths

characteristic: lastvisit

text: 17.82 S 31.04 E

text: no

text: no

text: human sputum metagenome

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text: no

text: yes

text: COTRIMOXAZOLE

text: stored in primestore

text: ['1.5', '']

text: -80 °C

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text: SP

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text: no

text: no

text: completed 18 months

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text: human sputum metagenome

text: Completed

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text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.human-associated

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text: MIMARKS.survey

characteristic: DOB

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text: yes

text: no

text: yes

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text: EFV/NVP

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text: NCBI

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text: HIV-associated chronic lung disease

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text: 17.82 S 31.04 E

text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

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text: yes

text: COTRIMOXAZOLE

text: stored in primestore

text: ['7', '']

text: -80 °C

text: no

text: SP

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text: human sputum metagenome

text: Completed

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text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.human-associated

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text: MIMARKS.survey

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characteristic: ENA-FIRST-PUBLIC

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text: Not abnormal

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text: Not abnormal

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text: no

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text: no

text: yes

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text: ['NA', '2018-01-10T00:00:00']

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text: respiratory tract

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text: HIV-associated chronic lung disease

text: yes

text: student

text: female

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text: sputum

text: 18 mths

text: 17.82 S 31.04 E

text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: yes

text: COTRIMOXAZOLE

text: stored in primestore

text: ['1', '']

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text: human sputum metagenome

text: Completed

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text: yes

text: yes

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text: MIGS/MIMS/MIMARKS.human-associated

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text: MIMARKS.survey

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characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

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characteristic: FVCpcpred

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characteristic: INSDC last update

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text: Not abnormal

text: Abnormal RR

text: Not abnormal

text: no

text: Not Adherent

text: no

text: yes

text: no

text: yes

text: no

text: EFV/NVP

text: yes

text: NCBI

text: yes

text: no

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characteristic: datehiv

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characteristic: endfollowup

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text: yes

text: student

text: male

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text: sputum

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text: 17.82 S 31.04 E

text: no

text: no

text: human sputum metagenome

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text: yes

text: COTRIMOXAZOLE

text: stored in primestore

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text: human sputum metagenome

text: Completed

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text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

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text: Not Adherent

characteristic: adherence

text: no

characteristic: adm

characteristic: ageyart

text: no

text: no

text: yes

text: no

text: EFV/NVP

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text: no

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characteristic: barcode

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characteristic: broker name

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characteristic: dow

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text: trial

text: yes

text: Homo sapiens

text: HIV-associated chronic lung disease

text: yes

text: female

text: human respiratory

text: TAGACTGTACTC

text: sputum

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characteristic: lastvisit

characteristic: lastvisitdate

text: 17.82 S 31.04 E

text: no

text: yes

text: human sputum metagenome

characteristic: organism

text: HIV-associated chronic lung disease

text: pure red cell aplaxia

text: no

text: stored in primestore

text: ['1.5', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: withdrawal

text: no

text: human sputum metagenome

text: Refused

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text: yes

text: no

text: no

text: no


text: MIGS/MIMS/MIMARKS.human-associated

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text: MIMARKS.survey

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characteristic: ENA-FIRST-PUBLIC

characteristic: External Id

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text: Abnormal RR

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text: yes

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text: yes

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text: NCBI

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text: yes

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characteristic: datehiv

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text: female

text: human respiratory

text: ATACTTCGCAGG

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text: 17.82 S 31.04 E

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text: no

text: human sputum metagenome

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text: yes

text: COTRIMOXAZOLE

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text: ['2', '']

text: -80 °C

text: no

text: SP

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text: completed 18 months

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text: human sputum metagenome

text: Completed

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text: yes

text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.human-associated

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text: MIMARKS.survey

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characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

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characteristic: FVC

characteristic: FVCZ

characteristic: FVCpcpred

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characteristic: INSDC status

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text: Adherent

characteristic: adherence

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characteristic: adm

characteristic: ageyart

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text: yes

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characteristic: cotrimoxazole

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characteristic: lastvisit

text: 17.82 S 31.04 E

text: no

text: no

text: human sputum metagenome

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text: COTRIMOXAZOLE

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text: ['2', '']

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text: yes

text: yes

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characteristic: ENA-FIRST-PUBLIC

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text: Not abnormal

characteristic: abnsat

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text: yes

text: NCBI

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text: male

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text: TGTACACGGCGA

text: sputum

text: 18 mths

text: 17.82 S 31.04 E

text: no

text: no

text: human sputum metagenome

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text: yes

text: yes

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text: no

text: yes

text: ATV/LPV/PI

characteristic: artreg

text: yes

characteristic: attendschool

characteristic: barcode

text: NCBI

characteristic: broker name

text: yes

characteristic: cotrimoxazole

text: yes

text: COTRIMOXAZOLE

text: ['NA', '2018-03-22T00:00:00']

text: human

text: respiratory tract

text: sputum

text: black

text: Zimbabwe: Harare

text: trial

text: no

text: Homo sapiens

text: HIV-associated chronic lung disease

text: yes

text: student

text: female

text: human respiratory

text: GAGGCCATCAGT

text: sputum

text: 18 mths

text: 17.82 S 31.04 E

text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: yes

text: COTRIMOXAZOLE

text: stored in primestore

text: ['1.5', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: yes

text: human sputum metagenome

text: Completed

text: Azithromycin

text: Week 72

text: yes

text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: Not abnormal

characteristic: abnhr

text: Not abnormal

characteristic: abnrr

text: Not abnormal

characteristic: abnsat

text: no

text: Adherent

text: no

text: yes

text: no

text: no

text: yes

text: ATV/LPV/PI

text: yes

text: NCBI

text: yes

text: no

characteristic: dateart

characteristic: datehiv

text: COTRIMOXAZOLE

characteristic: duryart

characteristic: endfollowup

text: ['NA', '2018-04-11T00:00:00']

characteristic: endtreatdate

characteristic: enrolmonth

text: human

text: respiratory tract

text: sputum

text: black

characteristic: ethnicity

text: Zimbabwe: Harare

text: trial

characteristic: group

text: no

text: Homo sapiens

characteristic: host

text: HIV-associated chronic lung disease

text: yes

text: student

text: female

text: human respiratory

text: TACTAATCTGCG

text: sputum

text: 18 mths

text: 17.82 S 31.04 E

text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: yes

text: COTRIMOXAZOLE

text: stored in primestore

text: ['1.5', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: no

text: human sputum metagenome

text: Completed

text: Azithromycin

text: Week 72

text: yes

text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: FEVpcpred

characteristic: FVC

characteristic: FVCZ

characteristic: FVCpcpred

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Not abnormal

text: Not abnormal

text: Not abnormal

text: no

text: Not Adherent

characteristic: adherence

text: no

characteristic: adm

characteristic: ageyart

text: yes

text: no

text: yes

text: no

text: EFV/NVP

characteristic: artreg

text: yes

characteristic: attendschool

characteristic: barcode

text: NCBI

characteristic: broker name

text: yes

characteristic: cotrimoxazole

text: no

text: COTRIMOXAZOLE

text: ['NA', '2018-04-19T00:00:00']

text: human

text: respiratory tract

text: sputum

text: black

text: Zimbabwe: Harare

text: trial

text: no

text: Homo sapiens

text: HIV-associated chronic lung disease

text: yes

text: student

text: male

text: human respiratory

text: GTTGGTCAATCT

text: sputum

text: 18 mths

text: 17.82 S 31.04 E

text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: yes

text: COTRIMOXAZOLE

text: stored in primestore

text: ['2', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: no

text: human sputum metagenome

text: Completed

text: Placebo

text: Week 72

text: yes

text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: AI

characteristic: WRrepeats

text: AI

text: Not abnormal

characteristic: abnhr

text: Not abnormal

characteristic: abnrr

text: Not abnormal

characteristic: abnsat

text: no

text: Adherent

text: no

text: yes

text: no

text: yes

text: no

text: EFV/NVP

text: yes

text: NCBI

text: no

text: no

characteristic: dateart

characteristic: datehiv

characteristic: duryart

characteristic: endfollowup

text: ['NA', '2018-05-17T00:00:00']

characteristic: endtreatdate

characteristic: enrolmonth

text: human

text: respiratory tract

text: sputum

text: black

characteristic: ethnicity

text: Zimbabwe: Harare

text: trial

characteristic: group

text: no

text: Homo sapiens

characteristic: host

text: HIV-associated chronic lung disease

text: yes

text: student

text: male

text: human respiratory

text: TGAGTTCGCTAT

text: sputum

text: 18 mths

text: 17.82 S 31.04 E

text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: no

text: stored in primestore

text: ['1.5', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: no

text: human sputum metagenome

text: Completed

text: Placebo

text: Week 72

text: yes

text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center alias

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

characteristic: barcode

text: NCBI

characteristic: broker name

text: ['not applicable', 'not applicable']

text: TCCTCTGTCGAC

characteristic: mock

text: metagenome

characteristic: organism

text: ['not applicable', '']

text: -20 °C

text: no

text: yes

text: metagenome

characteristic: title

characteristic: well

text: no


text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: NCBI

text: ['not applicable', 'not applicable']

characteristic: endtreatdate

text: ATTAGTTCGCGT

text: metagenome

text: ['not applicable', '']

text: -20 °C

text: no

text: yes

text: metagenome

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: ENA-FIRST-PUBLIC

text: public

text: NCBI

text: ['not applicable', 'not applicable']

text: TGATTTGGACCT

text: metagenome

text: ['not applicable', '']

text: -20 °C

text: no

text: yes

text: metagenome

text: no


text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: NCBI

text: ['not applicable', 'not applicable']

text: GACCCAATGTGG

text: metagenome

text: ['not applicable', '']

text: -20 °C

text: no

text: yes

text: metagenome

text: no


text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

characteristic: INSDC center alias

text: public

characteristic: INSDC status

text: MilliQ

text: NCBI

text: ['not applicable', 'not applicable']

text: water

text: CTAGCGAACATC

text: milliQ

characteristic: nontemplate

text: metagenome

text: ['not applicable', '']

text: -20 °C

text: no

text: MilliQ

text: yes

text: metagenome

text: no


text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: MilliQ

characteristic: barcode

text: NCBI

text: ['not applicable', 'not applicable']

text: water

text: CCATAGGGTTCA

text: milliQ

text: metagenome

text: ['not applicable', '']

text: -20 °C

text: no

text: MilliQ

text: yes

text: metagenome

text: no


text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

text: public

text: MilliQ

text: NCBI

characteristic: broker name

text: ['not applicable', 'not applicable']

text: water

text: CTGGAAATCTGC

text: milliQ

text: metagenome

characteristic: organism

text: ['not applicable', '']

text: -20 °C

text: no

text: MilliQ

text: yes

text: metagenome

text: no


text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

text: public

text: MilliQ

text: NCBI

text: ['not applicable', 'not applicable']

text: water

text: TTCAGCGCCCTT

text: milliQ

text: metagenome

text: ['not applicable', '']

text: -20 °C

text: no

text: MilliQ

text: yes

text: metagenome

characteristic: title

characteristic: well

text: no


text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Primestore

text: NCBI

text: ['not applicable', 'not applicable']

text: Primestore

text: GGCCACGTAGTA

text: Primestore

text: metagenome

text: ['not applicable', '']

text: -20 °C

text: no

text: Primestore

text: yes

text: metagenome

text: no


text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

characteristic: INSDC last update

text: public

text: Primestore

text: NCBI

text: ['not applicable', 'not applicable']

characteristic: endtreatdate

text: Primestore

text: TAGGAACTGGCC

text: Primestore

text: metagenome

text: ['not applicable', '']

text: -20 °C

text: no

text: Primestore

text: yes

text: metagenome

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: ENA-FIRST-PUBLIC

text: public

text: Primestore

text: NCBI

text: ['not applicable', 'not applicable']

text: Primestore

text: AAGAGATGTCGA

text: Primestore

text: metagenome

text: ['not applicable', '']

text: -20 °C

text: no

text: Primestore

text: yes

text: metagenome

text: no


text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Primestore

text: NCBI

text: ['not applicable', 'not applicable']

text: Primestore

text: ACACGTAAGCCT

text: Primestore

text: metagenome

text: ['not applicable', '']

text: -20 °C

text: no

text: Primestore

text: yes

text: metagenome

text: no


text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

characteristic: INSDC center alias

text: public

characteristic: INSDC status

text: Primestore

text: NCBI

text: ['not applicable', 'not applicable']

text: Primestore

text: GCATGGCTCTAA

text: Primestore

text: metagenome

text: ['not applicable', '']

text: -20 °C

text: no

text: Primestore

text: yes

text: metagenome

text: no


text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

text: public

characteristic: SRA accession

text: Primestore

text: NCBI

text: ['not applicable', 'not applicable']

text: Primestore

text: TGGCAAGACTCT

text: Primestore

characteristic: nontemplate

text: metagenome

text: ['not applicable', '']

text: -20 °C

text: no

text: Primestore

text: yes

text: metagenome

text: no


text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

text: public

characteristic: Submitter Id

text: Primestore

characteristic: barcode

text: NCBI

text: ['not applicable', 'not applicable']

text: Primestore

text: AATCTTGCTGCA

text: Primestore

text: metagenome

text: ['not applicable', '']

text: -20 °C

text: no

text: Primestore

text: yes

text: metagenome

text: no


text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

text: public

text: Primestore

text: NCBI

characteristic: broker name

text: ['not applicable', 'not applicable']

text: Primestore

text: GGTCACTGACAG

text: Primestore

text: metagenome

characteristic: organism

text: ['not applicable', '']

text: -20 °C

text: no

text: Primestore

text: yes

text: metagenome

text: no


text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

text: public

text: Primestore

text: NCBI

text: ['not applicable', 'not applicable']

text: Primestore

text: CAAGTTTACGGC

text: Primestore

text: metagenome

text: ['not applicable', '']

text: -20 °C

text: no

text: Primestore

text: yes

text: metagenome

characteristic: title

characteristic: well

text: no


text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: Primestore

text: NCBI

text: ['not applicable', 'not applicable']

text: Primestore

text: GACTGATCATCT

text: Primestore

text: metagenome

text: ['not applicable', '']

text: -20 °C

text: no

text: Primestore

text: yes

text: metagenome

text: no


text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

characteristic: INSDC last update

text: public

text: Primestore

text: NCBI

text: ['not applicable', 'not applicable']

characteristic: endtreatdate

text: Primestore

text: TTACGAGACGGC

text: Primestore

text: metagenome

text: ['not applicable', '']

text: -20 °C

text: no

text: Primestore

text: yes

text: metagenome

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: ENA-FIRST-PUBLIC

text: public

text: Primestore

text: NCBI

text: ['not applicable', 'not applicable']

text: Primestore

text: CTGGCCTAGGAA

text: Primestore

text: metagenome

text: ['not applicable', '']

text: -20 °C

text: no

text: Primestore

text: yes

text: metagenome

text: no


text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: Primestore

text: NCBI

text: ['not applicable', 'not applicable']

text: Primestore

text: CATGGCTACACA

text: Primestore

text: metagenome

text: ['not applicable', '']

text: -20 °C

text: no

text: Primestore

text: yes

text: metagenome

text: no


text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

characteristic: INSDC center alias

text: public

characteristic: INSDC status

text: Primestore

text: NCBI

text: ['not applicable', 'not applicable']

text: Primestore

text: CACCACGGAAAC

text: Primestore

text: metagenome

text: ['not applicable', '']

text: -20 °C

text: no

text: Primestore

text: yes

text: metagenome

text: no


text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

text: public

characteristic: SRA accession

text: Primestore

text: NCBI

text: ['not applicable', 'not applicable']

text: Primestore

text: GGTACATCGGTT

text: Primestore

characteristic: nontemplate

text: metagenome

text: ['not applicable', '']

text: -20 °C

text: no

text: Primestore

text: yes

text: metagenome

text: no


text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

text: public

characteristic: Submitter Id

text: Primestore

characteristic: barcode

text: NCBI

text: ['not applicable', 'not applicable']

text: Primestore

text: CCTAAGCACATG

text: Primestore

text: metagenome

text: ['not applicable', '']

text: -20 °C

text: no

text: Primestore

text: yes

text: metagenome

text: no


text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

characteristic: DOB

text: public

text: B

characteristic: WRrepeats

text: B

text: Adherent

characteristic: adherence

text: no

characteristic: adm

characteristic: ageyart

text: yes

text: no

text: EFV/NVP

characteristic: artreg

text: yes

characteristic: attendschool

text: NCBI

characteristic: broker name

text: yes

characteristic: cotrimoxazole

text: no

characteristic: dateart

characteristic: datehiv

characteristic: duryart

characteristic: endfollowup

text: ['not applicable', '2017-09-08T00:00:00']

characteristic: enrolmonth

text: human

text: respiratory tract

text: sputum

text: black

characteristic: ethnicity

text: Zimbabwe: Harare

text: trial

characteristic: group

text: Homo sapiens

characteristic: host

text: HIV-associated chronic lung disease

text: yes

text: student

text: male

text: human respiratory

text: AGAACACGTCTC

text: sputum

text: 18 mths

characteristic: lastvisit

characteristic: lastvisitdate

text: 17.82 S 31.04 E

text: human sputum metagenome

characteristic: organism

text: HIV-associated chronic lung disease

text: no

text: stored in primestore

text: ['not applicable', '']

text: -80 °C

text: no

text: expectorated

text: WRrepeat

text: yes

text: no

characteristic: smoker

text: completed 18 months

text: no

characteristic: tbtreat

text: human sputum metagenome

text: Completed

text: Placebo

text: Week 0

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: E

characteristic: WRrepeats

text: E

text: no

characteristic: adm

characteristic: ageyart

text: yes

text: no

text: EFV/NVP

characteristic: artreg

text: yes

characteristic: barcode

text: NCBI

text: yes

text: COTRIMOXAZOLE

text: ['not applicable', 'not applicable']

characteristic: endtreatdate

text: human

text: respiratory tract

text: sputum

text: black

text: Zimbabwe: Harare

text: comparison group

text: Homo sapiens

text: No HIV-associated chronic lung disease

text: yes

text: student

text: male

text: human respiratory

text: GTACGTGGGATC

text: sputum

text: 17.82 S 31.04 E

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: yes

text: COTRIMOXAZOLE

text: stored in primestore

text: ['not applicable', '']

text: -80 °C

text: no

text: expectorated

text: WRrepeat

text: yes

text: no

text: no

text: human sputum metagenome

characteristic: title

text: Week 0

characteristic: visit

characteristic: well

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: F

text: F

text: Adherent

characteristic: adherence

text: no

text: no

text: yes

text: ATV/LPV/PI

text: yes

characteristic: attendschool

text: NCBI

characteristic: broker name

text: yes

characteristic: cotrimoxazole

text: no

characteristic: dateart

characteristic: datehiv

text: COTRIMOXAZOLE

characteristic: duryart

characteristic: endfollowup

text: ['not applicable', '2017-07-20T00:00:00']

characteristic: enrolmonth

text: human

text: respiratory tract

text: sputum

text: black

characteristic: ethnicity

text: Zimbabwe: Harare

text: trial

characteristic: group

text: Homo sapiens

characteristic: host

text: HIV-associated chronic lung disease

text: yes

text: student

text: male

text: human respiratory

text: GACAGGAGATAG

text: sputum

text: 18 mths

characteristic: lastvisit

characteristic: lastvisitdate

text: 17.82 S 31.04 E

text: human sputum metagenome

characteristic: organism

text: HIV-associated chronic lung disease

text: yes

text: COTRIMOXAZOLE

text: stored in primestore

text: ['not applicable', '']

text: -80 °C

text: no

text: expectorated

text: WRrepeat

text: yes

text: no

characteristic: smoker

text: completed 18 months

text: no

characteristic: tbtreat

text: human sputum metagenome

text: Completed

text: Placebo

text: Week 48

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: I

characteristic: WRrepeats

text: I

text: Adherent

characteristic: adherence

text: no

characteristic: adm

characteristic: ageyart

text: yes

text: no

text: EFV/NVP

characteristic: artreg

text: yes

characteristic: barcode

text: NCBI

text: yes

text: no

text: COTRIMOXAZOLE

text: ['not applicable', '2018-08-16T00:00:00']

characteristic: endtreatdate

text: human

text: respiratory tract

text: sputum

text: black

text: Zimbabwe: Harare

text: trial

text: Homo sapiens

text: HIV-associated chronic lung disease

text: yes

text: student

text: female

text: human respiratory

text: TACTTCGCTCGC

text: sputum

text: 18 mths

text: 17.82 S 31.04 E

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: yes

text: COTRIMOXAZOLE

text: stored in primestore

text: ['not applicable', '']

text: -80 °C

text: no

text: expectorated

text: WRrepeat

text: yes

text: no

text: completed 18 months

text: yes

text: human sputum metagenome

text: Completed

text: Azithromycin

text: Week 0

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

text: public

text: M

text: M

text: Adherent

text: no

text: yes

text: no

text: EFV/NVP

text: no

characteristic: attendschool

text: NCBI

characteristic: broker name

text: yes

characteristic: cotrimoxazole

text: yes

characteristic: dateart

characteristic: datehiv

text: COTRIMOXAZOLE

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characteristic: lastvisit

characteristic: lastvisitdate

text: 17.82 S 31.04 E

text: human sputum metagenome

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text: MIGS/MIMS/MIMARKS.human-associated

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text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

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text: MIGS/MIMS/MIMARKS.human-associated

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text: MIMARKS.survey

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text: human sputum metagenome

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characteristic: lastvisit

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text: human sputum metagenome

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text: MIGS/MIMS/MIMARKS.human-associated

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characteristic: endtreatdate

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text: human sputum metagenome

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text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

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characteristic: attendschool

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characteristic: enrolmonth

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characteristic: lastvisit

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text: human sputum metagenome

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text: MIGS/MIMS/MIMARKS.human-associated

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text: MIMARKS.survey

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text: human sputum metagenome

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text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

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text: MIGS/MIMS/MIMARKS.human-associated

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text: MIMARKS.survey

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text: human sputum metagenome

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text: MIMARKS.survey

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characteristic: ENA-FIRST-PUBLIC

text: public

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text: yes

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characteristic: attendschool

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characteristic: broker name

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characteristic: endfollowup

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characteristic: enrolmonth

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text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

text: public

text: AAB

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characteristic: attendschool

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characteristic: lastvisit

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text: human sputum metagenome

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text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: AAN

text: AAN

text: Adherent

text: yes

text: yes

text: no

text: EFV/NVP

text: yes

characteristic: attendschool

text: NCBI

characteristic: broker name

text: yes

characteristic: cotrimoxazole

text: no

characteristic: endfollowup

text: ['not applicable', '2018-11-07T00:00:00']

characteristic: enrolmonth

text: human

text: respiratory tract

text: sputum

text: black

characteristic: ethnicity

text: Malawi: Blantyre

text: trial

characteristic: group

text: Homo sapiens

characteristic: host

text: HIV-associated chronic lung disease

text: yes

text: student

text: male

text: human respiratory

text: GCTCGAAGATCG

text: sputum

text: 18 mths

characteristic: lastvisit

characteristic: lastvisitdate

text: 15.77 S 35.02 E

characteristic: nadm

text: human sputum metagenome

characteristic: organism

text: HIV-associated chronic lung disease

text: no

text: stored in primestore

text: ['not applicable', '']

text: -80 °C

text: no

text: expectorated

text: WRrepeat

text: yes

text: no

characteristic: smoker

text: completed 18 months

text: no

characteristic: tbtreat

text: human sputum metagenome

characteristic: title

text: Completed

characteristic: treatstopreason

text: Placebo

text: Week 48

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: AAT

characteristic: WRrepeats

text: AAT

text: Adherent

characteristic: adherence

text: yes

characteristic: adm

text: yes

text: no

text: EFV/NVP

characteristic: artreg

text: yes

characteristic: barcode

text: NCBI

text: yes

text: no

characteristic: endtreatdate

text: human

text: respiratory tract

text: sputum

text: black

text: Malawi: Blantyre

text: trial

text: Homo sapiens

text: HIV-associated chronic lung disease

text: yes

text: student

text: male

text: human respiratory

text: CAGCATGTGTTG

text: sputum

text: 18 mths

text: 15.77 S 35.02 E

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: stored in primestore

text: ['not applicable', '']

text: -80 °C

text: no

text: expectorated

text: WRrepeat

text: yes

text: no

text: completed 18 months

text: no

text: human sputum metagenome

text: Completed

text: Placebo

text: Week 72

text: no


text: MIGS/MIMS/MIMARKS.human-associated

characteristic: BioSampleModel

text: MIMARKS.survey

text: public

text: NCBI

characteristic: broker name

text: ['not applicable', 'not applicable']

text: CTATTTGCGACA

characteristic: mock

text: metagenome

characteristic: organism

text: ['not applicable', '']

text: -20 °C

text: no

text: yes

text: metagenome

characteristic: title

characteristic: well

text: yes


text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: NCBI

text: ['not applicable', 'not applicable']

text: CCATACATAGCT

text: metagenome

text: ['not applicable', '']

text: -20 °C

text: no

text: yes

text: metagenome

text: yes


text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: NCBI

text: ['not applicable', 'not applicable']

text: TGTGAGCACGGT

text: metagenome

text: ['not applicable', '']

text: -20 °C

text: no

text: yes

text: metagenome

text: yes


text: MIGS/MIMS/MIMARKS.human-associated

text: MIMARKS.survey

text: public

characteristic: barcode

text: NCBI

text: ['not applicable', 'not applicable']

characteristic: endtreatdate

text: TCATCTGACTGA

text: metagenome

text: ['not applicable', '']

text: -20 °C

text: no

text: yes

text: metagenome

text: yes


text: MIGS/MIMS/MIMARKS.host-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: FEVpcpred

characteristic: FVC

characteristic: FVCZ

characteristic: FVCpcpred

text: public

text: Not abnormal

characteristic: abnhr

text: Not abnormal

characteristic: abnrr

text: Not abnormal

characteristic: abnsat

text: no

text: Adherent

characteristic: adherence

text: no

characteristic: adm

characteristic: ageyart

text: yes

text: no

text: yes

text: no

text: EFV/NVP

characteristic: artreg

text: yes

characteristic: attendschool

text: NCBI

characteristic: broker name

text: yes

characteristic: cotrimoxazole

text: no

characteristic: dateart

characteristic: datehiv

text: COTRIMOXAZOLE

characteristic: duryart

characteristic: endfollowup

text: ['2018-06-08T00:00:00', '2018-06-08T00:00:00']

characteristic: enrolmonth

text: human

text: respiratory tract

text: sputum

text: black

characteristic: ethnicity

text: Zimbabwe: Harare

text: trial

characteristic: group

text: no

text: Homo sapiens

characteristic: host

text: HIV-associated chronic lung disease

text: yes

text: student

text: male

text: human respiratory

text: GATTGGTTGCAC

text: sputum

text: 18 mths

text: 17.82 S 31.04 E

text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: yes

text: COTRIMOXAZOLE

text: stored in primestore

text: ['2', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: no

text: human sputum metagenome

text: Completed

text: Azithromycin

text: Week 0

text: yes

text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.host-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

characteristic: FEVpcpred

characteristic: FVC

characteristic: FVCZ

characteristic: FVCpcpred

characteristic: INSDC center alias

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

characteristic: SRA accession

characteristic: Submitter Id

text: Not abnormal

characteristic: abnhr

text: Not abnormal

characteristic: abnrr

text: Not abnormal

text: no

text: Adherent

text: no

text: yes

text: no

text: yes

text: no

text: EFV/NVP

text: yes

characteristic: barcode

text: NCBI

text: yes

text: no

text: COTRIMOXAZOLE

text: ['2018-06-29T00:00:00', '2018-06-29T00:00:00']

characteristic: endtreatdate

text: human

text: respiratory tract

text: sputum

text: black

text: Zimbabwe: Harare

text: trial

text: no

text: Homo sapiens

text: HIV-associated chronic lung disease

text: yes

text: student

text: female

text: human respiratory

text: ATTCATGGACGC

text: sputum

text: 18 mths

text: 17.82 S 31.04 E

text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: yes

text: COTRIMOXAZOLE

text: stored in primestore

text: ['2', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: no

text: human sputum metagenome

text: Completed

text: Azithromycin

text: Week 0

text: yes

text: yes

text: yes

text: no


text: MIGS/MIMS/MIMARKS.host-associated

characteristic: BioSampleModel

text: MIMARKS.survey

characteristic: DOB

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: public

text: Not abnormal

text: Not abnormal

text: Not abnormal

characteristic: abnsat

text: no

text: Adherent

characteristic: adherence

text: no

characteristic: adm

characteristic: ageyart

text: yes

text: no

text: yes

text: no

text: EFV/NVP

characteristic: artreg

text: yes

characteristic: attendschool

text: NCBI

characteristic: broker name

text: yes

characteristic: cotrimoxazole

text: no

characteristic: dateart

characteristic: datehiv

text: COTRIMOXAZOLE

characteristic: duryart

characteristic: endfollowup

characteristic: enrolmonth

text: human

text: respiratory tract

text: sputum

text: black

characteristic: ethnicity

text: Zimbabwe: Harare

text: trial

characteristic: group

text: no

text: Homo sapiens

characteristic: host

text: HIV-associated chronic lung disease

text: yes

text: student

text: male

text: human respiratory

text: ACTCACGGTATG

text: sputum

text: 18 mths

text: 17.82 S 31.04 E

text: no

text: no

text: human sputum metagenome

text: HIV-associated chronic lung disease

text: no

text: yes

text: COTRIMOXAZOLE

text: stored in primestore

text: ['2', '']

text: -80 °C

text: no

text: SP

text: expectorated

text: no

text: no

text: completed 18 months

text: no

text: human sputum metagenome

text: Completed

text: Placebo

text: Week 0

text: yes

text: yes

text: yes

text: no