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text: Mary-Ann Delta Case-Control Study

characteristic: title


text: live

text: SARS-CoV-2: clinical or host-associated

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text: Homo sapiens

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text: Mary-Ann Delta Case-Control Study

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characteristic: BioSampleModel

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: pda|luicer.olubayo@uct.ac.za

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text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-C877/2021

text: NCBI

text: 2 Military Hospital wc MAA

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-C877/2021

text: Homo sapiens

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text: Severe acute respiratory syndrome coronavirus 2

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text: SARS-CoV-2: clinical or host-associated

characteristic: External Id

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characteristic: INSDC center alias

text: pda|luicer.olubayo@uct.ac.za

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characteristic: Submitter Id

text: NCBI

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text: Homo sapiens

text: female

text: Mary-Ann Delta Case-Control Study


text: SARS-CoV-2: clinical or host-associated

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characteristic: INSDC center name

characteristic: INSDC first public

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text: Victoria Hospital wc VHW

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-C901/2021

text: Homo sapiens

text: female

text: Mary-Ann Delta Case-Control Study


text: University of Cape Town and National Health Laboratory Service

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characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

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text: Homo sapiens

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text: Mary-Ann Delta Case-Control Study


characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

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text: Homo sapiens

characteristic: host

text: male

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text: Mary-Ann Delta Case-Control Study


text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: Red Cross Children's Hospital wc RXH

text: South Africa:Western Cape

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text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-C944/2021

characteristic: isolate

text: Mary-Ann Delta Case-Control Study

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

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text: Homo sapiens

text: female

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characteristic: organism

text: Mary-Ann Delta Case-Control Study

characteristic: title


text: SARS-CoV-2: clinical or host-associated

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text: pda|luicer.olubayo@uct.ac.za

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text: NCBI

characteristic: broker name

text: Oudtshoorn Sick Bay (SANDF)

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text: Homo sapiens

text: female

text: Mary-Ann Delta Case-Control Study

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text: SARS-CoV-2: clinical or host-associated

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-D066/2021

text: NCBI

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-D066/2021

text: Homo sapiens

text: female

text: Severe acute respiratory syndrome coronavirus 2

text: Mary-Ann Delta Case-Control Study


characteristic: External Id

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: Groote Schuur Hospital wc GSH

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text: hCoV-19/SouthAfrica/NHLS-UCT-GS-D114/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-D114/2021

text: Mary-Ann Delta Case-Control Study


text: University of Cape Town and National Health Laboratory Service

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

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text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-D146/2021

text: Mary-Ann Delta Case-Control Study


characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-D158/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-D158/2021

text: Mary-Ann Delta Case-Control Study


characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mitchells Plain Hospital wc MPH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-D521/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-D521/2021

text: Mary-Ann Delta Case-Control Study


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

characteristic: INSDC center alias

text: pda|luicer.olubayo@uct.ac.za

text: public

characteristic: INSDC status

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characteristic: Submitter Id

text: NCBI

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA18/2022

text: Homo sapiens

text: male

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

characteristic: SRA accession

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA19/2022

text: NCBI

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA19/2022

text: Homo sapiens

characteristic: host

text: female

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA20/2022

text: NCBI

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA20/2022

text: Homo sapiens

text: female

characteristic: isolate

text: Surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA21/2022

text: NCBI

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA21/2022

text: Homo sapiens

text: female

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA22/2022

text: NCBI

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA22/2022

text: Homo sapiens

text: male

text: Surveillance

characteristic: title


text: SARS-CoV-2: clinical or host-associated

characteristic: BioSampleModel

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA23/2022

text: NCBI

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA23/2022

text: Homo sapiens

text: male

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA24/2022

text: NCBI

characteristic: broker name

text: Lancet

text: South Africa:Western Cape

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text: Homo sapiens

text: male

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

characteristic: ENA-FIRST-PUBLIC

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA25/2022

text: NCBI

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA25/2022

text: Homo sapiens

text: female

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

characteristic: ENA-LAST-UPDATE

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA26/2022

text: NCBI

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA26/2022

text: Homo sapiens

text: female

text: Surveillance/Pfizer vaccine breakthrough


characteristic: External Id

text: University of Cape Town and National Health Laboratory Service

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA39/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA39/2022

text: June week1 private surveilance/Pfizer vaccine breakthrough

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA40/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA40/2022

text: Severe acute respiratory syndrome coronavirus 2

text: June week1 private surveilance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


characteristic: INSDC last update

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA41/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA41/2022

text: June week1 private surveilance


text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA42/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA42/2022

text: June week1 private surveilance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA43/2022

text: Homo sapiens

characteristic: host

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA43/2022

text: June week1 private surveilance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA44/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA44/2022

characteristic: isolate

text: June week1 private surveilance


text: University of Cape Town and National Health Laboratory Service

text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA45/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA45/2022

characteristic: organism

text: June week1 private surveilance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA46/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA46/2022

text: June week1 private surveilance

characteristic: title


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA47/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA47/2022

text: June week1 private surveilance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA48/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA48/2022

text: Severe acute respiratory syndrome coronavirus 2

text: June week1 private surveilance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA49/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA49/2022

text: June week1 private surveilance/J&J vaccine breakthrough


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA50/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA50/2022

text: June week1 private surveilance/Vaccine breakthrough


text: University of Cape Town and National Health Laboratory Service

text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA51/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA51/2022

text: June week2 private surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA52/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA52/2022

text: June week2 private surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA53/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA53/2022

text: June week2 private surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA54/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA54/2022

text: June week2 private surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA55/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA55/2022

text: Severe acute respiratory syndrome coronavirus 2

text: June week2 private surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA56/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA56/2022

text: June week2 private surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA57/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA57/2022

text: June week2 private surveillance/Vaccine breakthrough


text: University of Cape Town and National Health Laboratory Service

text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA58/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA58/2022


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA59/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA59/2022

text: June week2 private surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA61/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA61/2022

text: June week2 private surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA62/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA62/2022

text: June week2 private surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: public

characteristic: Submitter Id

text: NCBI

characteristic: cell line

text: Hepatocyte

characteristic: cell type

text: human

characteristic: common name

text: Homo sapiens

text: 7 hour

characteristic: time

text: HepAD38 mRNA, B02 (20 uM), 7h, rep3 [s18]

text: B02 (20 uM)

characteristic: treatment


characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: public

text: NCBI

characteristic: broker name

text: Hepatocyte

text: human

text: Homo sapiens

text: 7 hour

text: HepAD38 mRNA, B02 (20 uM), 7h, rep2 [s17]

text: B02 (20 uM)


characteristic: INSDC first public

characteristic: INSDC last update

text: public

text: NCBI

text: Hepatocyte

text: human

text: Homo sapiens

text: 7 hour

text: HepAD38 mRNA, B02 (20 uM), 7h, rep1 [s16]

text: B02 (20 uM)


text: public

characteristic: INSDC status

characteristic: SRA accession

text: NCBI

text: Hepatocyte

text: human

text: Homo sapiens

text: 7 hour

text: HepAD38 mRNA, DMSO, 7h, rep3 [s15]

text: DMSO


text: public

text: NCBI

text: Hepatocyte

text: human

text: Homo sapiens

text: 7 hour

text: HepAD38 mRNA, DMSO, 7h, rep2 [s14]

text: DMSO


text: public

text: NCBI

text: Hepatocyte

text: human

text: Homo sapiens

text: 7 hour

text: HepAD38 mRNA, DMSO, 7h, rep1 [s13]

text: DMSO


text: Invertebrate

characteristic: BioSampleModel

text: pda|iorlov.bio@gmail.com

characteristic: INSDC center alias

text: pda|iorlov.bio@gmail.com

characteristic: INSDC center name

text: public

text: Not infected

characteristic: Infection with B. polonica

text: NCBI

text: Hemocytes from the uninfected snails which did not shed any cercariae. Control sample.

characteristic: description

text: Russia: Saint-Petersburg, Lake Finskoe

text: Mix of hemocytes from 10 uninfected snails

characteristic: isolate

text: Lake Finskoe in the outskirts of Saint-Petersburg

text: 60.082 N 30.285 E

text: Planorbarius corneus

text: hermaphrodite

characteristic: sex

text: hemocytes

characteristic: tissue


text: Invertebrate

text: pda|iorlov.bio@gmail.com

text: pda|iorlov.bio@gmail.com

text: public

text: Infected

characteristic: Submitter Id

text: NCBI

text: Hemocytes from the snails infected with Bilharziella polonica. Infection was confirmed by shedding cercariae and morphological examination of sporocyst.

text: Russia: Saint-Petersburg, Lake Finskoe

text: Mix of hemocytes from 10 infected snails

text: 60.082 N 30.285 E

text: Planorbarius corneus

characteristic: organism

text: hermaphrodite

text: hemocytes

characteristic: title


characteristic: External Id

text: Chines Academy of Agricultural Sciences

characteristic: INSDC secondary accession

text: live

text: Invertebrate

characteristic: NCBI submission model

characteristic: NCBI submission package

text: China

text: artifical diet_1

text: Agrotis ipsilon

text: larva

text: Invertebrate sample from Agrotis ipsilon


text: Chines Academy of Agricultural Sciences

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Invertebrate

text: China

text: artifical diet_2

text: Agrotis ipsilon

text: larva


text: Chines Academy of Agricultural Sciences

text: live

text: Invertebrate

characteristic: SRA accession

text: China

text: artifical diet_3

text: Agrotis ipsilon

text: larva


text: Chines Academy of Agricultural Sciences

characteristic: INSDC center name

text: live

text: Invertebrate

text: China

text: artifical diet_4

text: Agrotis ipsilon

text: larva


text: Chines Academy of Agricultural Sciences

text: live

text: Invertebrate

text: China

text: artifical diet_5

text: Agrotis ipsilon

text: larva


text: Chines Academy of Agricultural Sciences

text: live

text: Invertebrate

text: China

text: artifical diet_6

text: Agrotis ipsilon

text: larva


text: Chines Academy of Agricultural Sciences

text: live

text: Invertebrate

text: China

text: Agrotis ipsilon

text: larva


text: Chines Academy of Agricultural Sciences

text: live

text: Invertebrate

text: China

text: Agrotis ipsilon

text: larva


Sham + CON01

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

characteristic: host

text: intestinal tract

text: 35.60 N 140.14 E

text: gut metagenome

text: replicate=biological replicate 1

characteristic: replicate


Sham + CON02

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.14 E

text: gut metagenome

text: replicate=biological replicate 2


Sham + CON03

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.14 E

text: gut metagenome

text: replicate=biological replicate 3


Sham + CON04

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.14 E

text: gut metagenome

text: replicate=biological replicate 4


Sham + CON05

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.14 E

text: gut metagenome

text: replicate=biological replicate 5


Sham + CON06

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.14 E

text: gut metagenome

text: replicate=biological replicate 6


Sham + CON07

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.14 E

text: gut metagenome

text: replicate=biological replicate 7


Sham + CON08

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.14 E

text: gut metagenome

text: replicate=biological replicate 8


Sham + CON09

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.14 E

text: gut metagenome

text: replicate=biological replicate 9


SDV + CPZ01

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.14 E

text: gut metagenome

text: replicate=biological replicate 1


SDV + CPZ02

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.14 E

text: gut metagenome

text: replicate=biological replicate 2


SDV + CPZ03

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.14 E

text: gut metagenome

text: replicate=biological replicate 3


SDV + CPZ04

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.14 E

text: gut metagenome

text: replicate=biological replicate 4


SDV + CPZ06

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.14 E

text: gut metagenome

text: replicate=biological replicate 5


SDV + CPZ07

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.14 E

text: gut metagenome

text: replicate=biological replicate 6


SDV + CPZ08

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.14 E

text: gut metagenome

text: replicate=biological replicate 7


SDV + CPZ10

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.14 E

text: gut metagenome

text: replicate=biological replicate 8


SDV + CPZ11

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.14 E

text: gut metagenome

text: replicate=biological replicate 9


SDV + CPZ12

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.14 E

text: gut metagenome

text: replicate=biological replicate 10


SDV + CON03

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.14 E

text: gut metagenome

text: replicate=biological replicate 1


SDV + CON04

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.14 E

text: gut metagenome

text: replicate=biological replicate 2


SDV + CON05

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.14 E

text: gut metagenome

text: replicate=biological replicate 3


SDV + CON06

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.14 E

text: gut metagenome

text: replicate=biological replicate 4


SDV + CON07

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.14 E

text: gut metagenome

text: replicate=biological replicate 5


SDV + CON08

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.15 E

text: gut metagenome

text: replicate=biological replicate 6


SDV + CON09

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.16 E

text: gut metagenome

text: replicate=biological replicate 7


SDV + CON10

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.17 E

text: gut metagenome

text: replicate=biological replicate 8


SDV + CON11

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.18 E

text: gut metagenome

text: replicate=biological replicate 9


SDV + CON12

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.19 E

text: gut metagenome

text: replicate=biological replicate 10


Sham + CPZ01

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.20 E

text: gut metagenome

text: replicate=biological replicate 1


Sham + CPZ02

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.21 E

text: gut metagenome

text: replicate=biological replicate 2


Sham + CPZ03

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.22 E

text: gut metagenome

text: replicate=biological replicate 3


Sham + CPZ04

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.23 E

text: gut metagenome

text: replicate=biological replicate 4


Sham + CPZ05

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.24 E

text: gut metagenome

text: replicate=biological replicate 5


Sham + CPZ06

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.25 E

text: gut metagenome

text: replicate=biological replicate 6


Sham + CPZ07

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.26 E

text: gut metagenome

text: replicate=biological replicate 7


Sham + CPZ08

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.27 E

text: gut metagenome

text: replicate=biological replicate 8


Sham + CPZ09

text: Chiba university

text: live

text: Metagenome or environmental

text: not collected

text: Japan:Chiba

text: Mus musculus

text: intestinal tract

text: 35.60 N 140.28 E

text: gut metagenome

text: replicate=biological replicate 9


text: Guizhou University

text: live

text: Model organism or animal

text: two-year-old

characteristic: age

text: Jianbai Xiang Pig

characteristic: breed

text: not collected

characteristic: cultivar

text: Growth and finishing stage

text: not collected

characteristic: ecotype

characteristic: isolate

text: Sus scrofa

text: female

text: not collected

characteristic: strain

text: white epidermis

text: Model organism or animal sample from Sus scrofa


characteristic: External Id

text: Guizhou University

text: live

text: Model organism or animal

text: two-year-old

text: Jianbai Xiang Pig

text: not collected

text: Growth and finishing stage

text: not collected

text: Sus scrofa

characteristic: organism

text: female

characteristic: sex

text: not collected

text: black epidermis

characteristic: tissue

characteristic: title


text: Chines Academy of Agricultural Sciences

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Invertebrate

characteristic: NCBI submission model

characteristic: NCBI submission package

text: China

text: Agrotis ipsilon

text: larva


text: Chines Academy of Agricultural Sciences

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Invertebrate

text: China

text: Agrotis ipsilon

text: larva


text: Microbe, viral or environmental

characteristic: BioSampleModel

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: pda|daniel.ekhlas@orcid

characteristic: INSDC center alias

text: pda|daniel.ekhlas@orcid

text: public

characteristic: SRA accession

characteristic: Submitter Id

text: NCBI

characteristic: broker name

text: Teagasc Food Research Centre, Dublin

text: Ireland

text: bird feces

text: Escherichia coli

text: surveillance study

text: animal

text: Escherichia coli serotype O9:H17

text: Escherichia coli


text: Microbe, viral or environmental

characteristic: External Id

text: pda|daniel.ekhlas@orcid

text: pda|daniel.ekhlas@orcid

text: public

text: NCBI

text: Teagasc Food Research Centre, Dublin

text: Exposure to 0 mM zinc nitrate

text: Ireland

text: in vitro experiment

text: Salmonella enterica

characteristic: organism

text: conjugation study

text: other

text: Salmonella enterica serovar Infantis

characteristic: strain

text: Salmonella enterica


text: Microbe, viral or environmental

text: pda|daniel.ekhlas@orcid

text: pda|daniel.ekhlas@orcid

characteristic: INSDC first public

text: public

text: NCBI

text: Teagasc Food Research Centre, Dublin

text: Exposure to 1 mM zinc nitrate

text: Ireland

text: in vitro experiment

text: Salmonella enterica

text: conjugation study

text: other

text: Salmonella enterica serovar Infantis

text: Salmonella enterica

characteristic: title


text: Microbe, viral or environmental

text: pda|daniel.ekhlas@orcid

text: pda|daniel.ekhlas@orcid

characteristic: INSDC last update

text: public

text: NCBI

text: Teagasc Food Research Centre, Dublin

text: Exposure to 0 mM zinc nitrate

text: Ireland

text: in vitro experiment

text: Salmonella enterica

text: conjugation study

text: other

text: Salmonella enterica serovar London

text: Salmonella enterica


text: Microbe, viral or environmental

text: pda|daniel.ekhlas@orcid

text: pda|daniel.ekhlas@orcid

text: public

text: NCBI

text: Teagasc Food Research Centre, Dublin

text: Exposure to 1 mM zinc nitrate

text: Ireland

text: in vitro experiment

text: Salmonella enterica

text: conjugation study

text: other

text: Salmonella enterica serovar London

text: Salmonella enterica


text: Microbe, viral or environmental

text: pda|daniel.ekhlas@orcid

text: pda|daniel.ekhlas@orcid

text: public

text: NCBI

text: Teagasc Food Research Centre, Dublin

text: Exposure to 0 mM zinc nitrate

text: Ireland

text: in vitro experiment

text: Salmonella enterica

text: conjugation study

text: other

text: Salmonella enterica serovar Enteriditis

text: Salmonella enterica


text: Microbe, viral or environmental

text: pda|daniel.ekhlas@orcid

text: pda|daniel.ekhlas@orcid

text: public

text: NCBI

text: Teagasc Food Research Centre, Dublin

text: Exposure to 1 mM zinc nitrate

text: Ireland

text: in vitro experiment

text: Salmonella enterica

text: conjugation study

text: other

text: Salmonella enterica serovar Enteriditis

text: Salmonella enterica


text: Microbe, viral or environmental

text: pda|daniel.ekhlas@orcid

text: pda|daniel.ekhlas@orcid

text: public

text: NCBI

text: Teagasc Food Research Centre, Dublin

text: Ireland

text: pig feces

text: Salmonella enterica

text: surveillance study

text: animal

text: Salmonella enterica serovar Infantis

text: Salmonella enterica


text: Microbe, viral or environmental

text: pda|daniel.ekhlas@orcid

text: pda|daniel.ekhlas@orcid

text: public

text: NCBI

text: Teagasc Food Research Centre, Dublin

text: Ireland

text: pig feed bin

text: Salmonella enterica

text: surveillance study

text: environmental

text: Salmonella enterica serovar London

text: Salmonella enterica


text: Microbe, viral or environmental

text: pda|daniel.ekhlas@orcid

text: pda|daniel.ekhlas@orcid

text: public

text: NCBI

text: Teagasc Food Research Centre, Dublin

text: Ireland

text: poultry samples

text: Salmonella enterica

text: surveillance study

text: animal

text: Salmonella enterica serovar Enteriditis

text: Salmonella enterica


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BL17/2022

text: NCBI

text: D'Almeida Clinic wc DAL

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BL17/2022

text: Homo sapiens

characteristic: host

text: female

characteristic: isolate

text: Severe acute respiratory syndrome coronavirus 2

text: Surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

characteristic: INSDC center name

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-O950/2022

text: NCBI

text: New Somerset Hospital wc NSH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-O950/2022

text: Homo sapiens

text: female

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

characteristic: INSDC status

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA91/2022

text: NCBI

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA91/2022

text: Homo sapiens

text: male

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

characteristic: BioSampleModel

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-O975/2022

text: NCBI

text: Oudtshoorn Sick Bay (SANDF)

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-O975/2022

text: Homo sapiens

text: male

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

characteristic: ENA-FIRST-PUBLIC

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-O955/2022

text: NCBI

text: Montagu Clinic wc MGH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-O955/2022

text: Homo sapiens

text: female

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

characteristic: ENA-LAST-UPDATE

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-O977/2022

text: NCBI

text: Gansbaai Clinic wc GBP

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-O977/2022

text: Homo sapiens

text: male

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

characteristic: INSDC center alias

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BK93/2022

text: NCBI

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BK93/2022

text: Homo sapiens

text: male

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

characteristic: SRA accession

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA96/2022

text: NCBI

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA96/2022

text: Homo sapiens

text: male

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BL19/2022

characteristic: Submitter Id

text: NCBI

text: Red Cross Children's Hospital wc RXH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BL19/2022

text: Homo sapiens

text: female

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-O963/2022

text: NCBI

characteristic: broker name

text: Valkenberg Hospital wc VBH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-O963/2022

text: Homo sapiens

text: male

text: Severe acute respiratory syndrome coronavirus 2

text: Surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: SARS-CoV-2: clinical or host-associated

characteristic: External Id

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BK97/2022

text: NCBI

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BK97/2022

text: Homo sapiens

text: female

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BK95/2022

text: NCBI

text: Groote Schuur Hospital wc GSH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BK95/2022

text: Homo sapiens

text: male

characteristic: organism

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA95/2022

text: NCBI

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA95/2022

text: Homo sapiens

text: male

text: Surveillance/Vaccine breakthrough


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA75/2022

text: NCBI

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA75/2022

text: Homo sapiens

text: male

text: Surveillance/Pfizer vaccine breakthrough


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-O971/2022

text: NCBI

text: Springbok PHC Clinic

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-O971/2022

text: Homo sapiens

text: female

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BL08/2022

text: NCBI

text: 2 Military Hospital wc MAA

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BL08/2022

text: Homo sapiens

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BL01/2022

text: NCBI

text: Forensic Medicine - UCT

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BL01/2022

text: Homo sapiens

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-O976/2022

text: NCBI

text: Gansbaai Clinic wc GBP

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-O976/2022

text: Homo sapiens

text: female

text: Severe acute respiratory syndrome coronavirus 2

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BL24/2022

text: NCBI

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BL24/2022

text: Homo sapiens

text: male

text: Surveillance/Novel FIND POC

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-O973/2022

text: NCBI

text: New Somerset Hospital wc NSH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-O973/2022

text: Homo sapiens

text: female

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BK99/2022

text: NCBI

text: Groote Schuur Hospital wc GSH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BK99/2022

text: Homo sapiens

text: female

text: Surveillance/Novel FIND POC


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA92/2022

text: NCBI

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA92/2022

text: Homo sapiens

text: female

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA89/2022

text: NCBI

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA89/2022

text: Homo sapiens

text: female

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BL04/2022

text: NCBI

text: 2 Military Hospital wc MAA

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BL04/2022

text: Homo sapiens

text: male

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BL27/2022

text: NCBI

text: Mitchells Plain Hospital wc MPH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BL27/2022

text: Homo sapiens

text: female

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BL31/2022

text: NCBI

text: Mitchells Plain Hospital wc MPH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BL31/2022

text: Homo sapiens

text: male

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BL15/2022

text: NCBI

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BL15/2022

text: Homo sapiens

text: male

text: Severe acute respiratory syndrome coronavirus 2

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BL06/2022

text: NCBI

text: Great Brak River Clinic wc GBC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BL06/2022

text: Homo sapiens

text: male

text: Surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA76/2022

text: NCBI

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA76/2022

text: Homo sapiens

text: female

text: Surveillance/Pfizer vaccine breakthrough


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA73/2022

text: NCBI

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA73/2022

text: Homo sapiens

text: male

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA77/2022

text: NCBI

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA77/2022

text: Homo sapiens

text: female

text: Surveillance/Vaccine breakthrough


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-O983/2022

text: NCBI

text: Citrusdal Hospital wc CIT

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-O983/2022

text: Homo sapiens

text: male

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-O979/2022

text: NCBI

text: New Somerset Hospital wc NSH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-O979/2022

text: Homo sapiens

text: female

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BL30/2022

text: NCBI

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BL30/2022

text: Homo sapiens

text: male

text: Surveillance/Novel FIND POC


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BK98/2022

text: NCBI

text: 2 Military Hospital wc MAA

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BK98/2022

text: Homo sapiens

text: male

text: Severe acute respiratory syndrome coronavirus 2

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BL16/2022

text: NCBI

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BL16/2022

text: Homo sapiens

text: male

text: Surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-O958/2022

text: NCBI

text: New Somerset Hospital wc NSH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-O958/2022

text: Homo sapiens

text: male

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-O980/2022

text: NCBI

text: SAS Saldanha

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-O980/2022

text: Homo sapiens

text: female

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-O965/2022

text: NCBI

text: Springbok PHC Clinic

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-O965/2022

text: Homo sapiens

text: female

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-O960/2022

text: NCBI

text: SAS Saldanha

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-O960/2022

text: Homo sapiens

text: female

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-O961/2022

text: NCBI

text: New Somerset Hospital wc NSH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-O961/2022

text: Homo sapiens

text: male

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BL10/2022

text: NCBI

text: Plettenberg Bay Clinic wc PLC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BL10/2022

text: Homo sapiens

text: male

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BK94/2022

text: NCBI

text: Groote Schuur Hospital wc GSH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BK94/2022

text: Homo sapiens

text: male

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA94/2022

text: NCBI

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA94/2022

text: Homo sapiens

text: male

text: Severe acute respiratory syndrome coronavirus 2

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BL07/2022

text: NCBI

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BL07/2022

text: Homo sapiens

text: male

text: Surveillance/Novel FIND POC

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-O969/2022

text: NCBI

text: Robertson Hospital wc ROB

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-O969/2022

text: Homo sapiens

text: female

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-O985/2022

text: NCBI

text: SAS Saldanha

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-O985/2022

text: Homo sapiens

text: male

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-O951/2022

text: NCBI

text: Langebaan Clinic wc LBC

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-O951/2022

text: Homo sapiens

text: female

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BL18/2022

text: NCBI

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BL18/2022

text: Homo sapiens

text: male

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA74/2022

text: NCBI

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA74/2022

text: Homo sapiens

text: female

text: Surveillance/Pfizer vaccine breakthrough


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA90/2022

text: NCBI

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA90/2022

text: Homo sapiens

text: female

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA78/2022

text: NCBI

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA78/2022

text: Homo sapiens

text: female

text: Severe acute respiratory syndrome coronavirus 2


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BL11/2022

text: NCBI

text: Heideveld Emergency Centre

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BL11/2022

text: Homo sapiens

text: male

text: Surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BL13/2022

text: NCBI

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BL13/2022

text: Homo sapiens

text: male

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-O978/2022

text: NCBI

text: Macassar CDC wc MCP

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-O978/2022

text: Homo sapiens

text: female

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BL28/2022

text: NCBI

text: Mitchells Plain Hospital wc MPH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BL28/2022

text: Homo sapiens

text: male

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-O949/2022

text: NCBI

text: Worcester Hospital wc WOC

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-O949/2022

text: Homo sapiens

text: male

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-O974/2022

text: NCBI

text: SAS Saldanha

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-O974/2022

text: Homo sapiens

text: male

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BL09/2022

text: NCBI

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BL09/2022

text: Homo sapiens

text: male

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZA93/2022

text: NCBI

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZA93/2022

text: Homo sapiens

text: male

text: Surveillance


text: SARS-CoV-2: clinical or host-associated

text: pda|luicer.olubayo@uct.ac.za

text: pda|luicer.olubayo@uct.ac.za

text: public

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-O947/2022

text: NCBI

text: New Somerset Hospital wc NSH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-O947/2022

text: Homo sapiens

text: male

text: Severe acute respiratory syndrome coronavirus 2

text: Surveillance


text: Microbe, viral or environmental

text: pda|zhangxiaoxu@orcid

text: pda|zhangxiaoxu@orcid

text: public

text: NCBI

text: Qin Yingxue, Professor, Fisheries College, Jimei University

text: China:Tong 'an Bay, Xiamen

text: Grouper infected with canker disease

text: Vibrio harveyi

text: bacteria

characteristic: strain

text: Vibrio harveyi


characteristic: INSDC first public

text: public

text: NCBI

characteristic: cell line

text: human myelogenous leukemia cell line

characteristic: cell type

text: human

characteristic: common name

text: Homo sapiens

text: K562, rep2, Input

text: Input

characteristic: treatment


characteristic: INSDC last update

text: public

text: NCBI

text: human myelogenous leukemia cell line

text: human

text: Homo sapiens

text: K562, rep1, Input

characteristic: title

text: Input


text: public

characteristic: INSDC status

text: NCBI

text: human myelogenous leukemia cell line

text: human

text: Homo sapiens

text: K562, pH7.2, 37C, rep2, iMotif

text: i-Motif pulldown


characteristic: ENA-FIRST-PUBLIC

text: public

text: NCBI

text: human myelogenous leukemia cell line

text: human

text: Homo sapiens

text: K562, pH7.2, 37C, rep1, iMotif

text: i-Motif pulldown


characteristic: ENA-LAST-UPDATE

text: public

text: postnatal day 14 (p14)

characteristic: age

text: NCBI

text: pericyte

text: house mouse

characteristic: genotype

text: Mus musculus

text: cerebellum

text: cerebellum

characteristic: tissue

text: pericytes, KO, p14, rep 3


text: public

characteristic: SRA accession

characteristic: Submitter Id

text: postnatal day 14 (p14)

text: NCBI

characteristic: broker name

text: pericyte

text: house mouse

text: Mus musculus

text: cerebellum

text: cerebellum

text: pericytes, KO, p14, rep 2


characteristic: External Id

text: public

text: postnatal day 14 (p14)

text: NCBI

text: pericyte

text: house mouse

text: Mus musculus

characteristic: organism

text: cerebellum

text: cerebellum

text: pericytes, KO, p14, rep 1


characteristic: INSDC first public

text: public

text: postnatal day 14 (p14)

text: NCBI

text: pericyte

text: house mouse

text: Mus musculus

text: cerebellum

text: cerebellum

text: pericytes, Control, p14, rep 3


text: public

text: postnatal day 14 (p14)

text: NCBI

text: pericyte

characteristic: cell type

text: house mouse

text: Mus musculus

text: cerebellum

text: cerebellum

text: pericytes, Control, p14, rep 2


text: public

text: postnatal day 14 (p14)

text: NCBI

text: pericyte

text: house mouse

characteristic: common name

text: Mus musculus

text: cerebellum

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