status: PUBLIC

text: Phaseolus vulgaris

characteristic: Organism

text: Common bean

characteristic: common name

text: Old cultivar

characteristic: derived from

characteristic: description

text: Phaseolus vulgaris

characteristic: scientific name

Plant Genetics Group

Address: Ctra AS-267 PK 19, 33300, Villaviciosa, Asturias, Spain

Ana Campa

FirstName: Ana

LastName: Campa


text: Phaseolus vulgaris

text: Common bean

text: Breeding line

text: Phaseolus vulgaris


text: Phaseolus vulgaris

text: Common bean

text: Landrace

text: Phaseolus vulgaris


text: Phaseolus vulgaris

text: Common bean

text: Elite cultivar

text: Phaseolus vulgaris


unit: YYYY

characteristic: birth date

text: Pig crossbreed

characteristic: breed

text: normal

characteristic: health status

text: organism

characteristic: material

text: Sus scrofa

characteristic: organism

text: FAANG

characteristic: project

text: Crossbreed pig, adult male, 6 months of age

characteristic: sample description

characteristic: sample name

text: intact male

characteristic: sex

text: Bulk RNAseq data from porcine sorted immune cells and single-cell RNAseq from porcine PBMCs

characteristic: submission description

text: ISU-AG2PI-FAANG-Swine_Immune_cells-011521

characteristic: submission title

type: derived from

Iowa State University (ISU)

Role: institution

Address: Iowa State University, Department of Animal Science, 806 Stange Road, 2255 Kildee Hall. Ames, IA 50010

Name: The United States Department of Agriculture (USDA)

Role: funder

Address: 1920 Dayton Ave, Ames, IA 50010

Juber Herrera

FirstName: Juber

LastName: Herrera

Role: experiment performer

Muskan Kapoor

FirstName: Muskan

LastName: Kapoor


text: Pig crossbreed

text: normal

text: organism

text: Sus scrofa

text: FAANG

text: intact male


text: Pig crossbreed

text: normal

text: organism

text: Sus scrofa

text: FAANG

text: Crossbreed pig, adult, 1 year of age

text: castrated male


text: Pig crossbreed

text: normal

text: organism

text: Sus scrofa

text: FAANG

text: Crossbreed pig, adult, 1 year of age

text: intact male


text: Pig crossbreed

text: normal

text: organism

text: Sus scrofa

text: FAANG

text: Crossbreed pig, adult, 8 weeks of age post-weaning

text: intact female


text: Pig crossbreed

text: normal

text: organism

text: Sus scrofa

text: FAANG

text: Crossbreed pig, adult, 4 weeks post-weaning

text: intact male


unit: month

characteristic: animal age at collection

text: adult

characteristic: developmental stage

text: normal

characteristic: health status at collection

text: specimen from organism

text: Sus scrofa

text: peripheral blood cells

characteristic: organism part

text: FAANG

text: Blood, Pig_A1

characteristic: specimen collection date

characteristic: specimen collection protocol


characteristic: derived from

text: adult

text: normal

text: specimen from organism

text: Sus scrofa

text: peripheral blood cells

text: FAANG

text: Blood, Pig_A2


text: adult

text: normal

text: specimen from organism

text: Sus scrofa

text: peripheral blood cells

text: FAANG

text: Blood, Pig_B1


text: adult

text: normal

text: specimen from organism

text: Sus scrofa

text: peripheral blood cells

text: FAANG

text: Blood, Pig_B2


text: adult

text: normal

text: specimen from organism

text: Sus scrofa

text: peripheral blood cells

text: FAANG

text: Blood, Pig_B3


text: adult

text: normal

text: specimen from organism

text: Sus scrofa

text: peripheral blood cells

text: FAANG

text: Blood, Pig_C1


text: adult

text: normal

text: specimen from organism

text: Sus scrofa

text: peripheral blood cells

text: FAANG

text: Blood, Pig_C2


text: adult

text: normal

text: specimen from organism

text: Sus scrofa

text: peripheral blood cells

text: FAANG

text: Blood, Pig_C3


text: adult

text: normal

text: specimen from organism

text: Sus scrofa

text: peripheral blood cells

text: FAANG

text: Blood, Pig_D1


text: adult

text: normal

text: specimen from organism

text: Sus scrofa

text: peripheral blood cells

text: FAANG

text: Blood, Pig_D2


text: peripheral blood mononuclear cell

characteristic: cell type

text: cell specimen

text: Sus scrofa

text: FAANG

characteristic: purification protocol

text: Unstimulated PBMCs sorted cell


characteristic: External Id

text: Pathology, UCI

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Homo sapiens

text: GEO accession GSM3332213 is currently private and is scheduled to be released on Feb 08, 2023.

characteristic: title


text: Pathology, UCI

text: live

text: Generic

text: Homo sapiens

characteristic: organism

text: GEO accession GSM3332220 is currently private and is scheduled to be released on Feb 08, 2023.


text: Pathology, UCI

text: live

text: Generic

text: Homo sapiens

text: GEO accession GSM3332219 is currently private and is scheduled to be released on Feb 08, 2023.


text: Pathology, UCI

text: live

text: Generic

text: Homo sapiens

text: GEO accession GSM3332218 is currently private and is scheduled to be released on Feb 08, 2023.


text: Pathology, UCI

text: live

text: Generic

text: Homo sapiens

text: GEO accession GSM3332217 is currently private and is scheduled to be released on Feb 08, 2023.


text: Pathology, UCI

text: live

text: Generic

text: Homo sapiens

text: GEO accession GSM3332216 is currently private and is scheduled to be released on Feb 08, 2023.


text: Pathology, UCI

text: live

text: Generic

text: Homo sapiens

text: GEO accession GSM3332215 is currently private and is scheduled to be released on Feb 08, 2023.


text: Pathology, UCI

text: live

text: Generic

text: Homo sapiens

text: GEO accession GSM3332214 is currently private and is scheduled to be released on Feb 08, 2023.


text: Pathology, UCI

text: live

text: Generic

text: Homo sapiens

text: GEO accession GSM3336803 is currently private and is scheduled to be released on Feb 08, 2023.


text: Rutgers RWJMS

text: live

text: Generic

text: Mus musculus

text: GEO accession GSM4301162 is currently private and is scheduled to be released on Feb 07, 2023.


text: Rutgers RWJMS

text: live

text: Generic

text: Mus musculus

text: GEO accession GSM4301161 is currently private and is scheduled to be released on Feb 07, 2023.


text: Metagenome or environmental

tag: attribute

characteristic: BioSampleModel

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

text: pda|tlumpi@orcid

characteristic: INSDC center alias

text: pda|tlumpi@orcid

text: public

characteristic: Submitter Id

text: NCBI

characteristic: broker name

characteristic: dummy variable

text: Sweden: Uppsala

text: 59.849056 N 17.623528 E

text: bacterioplankton metagenome

text: biological replicate 5

characteristic: replicate


text: Metagenome or environmental

characteristic: External Id

text: pda|tlumpi@orcid

text: pda|tlumpi@orcid

characteristic: INSDC center name

characteristic: INSDC first public

text: public

text: NCBI

text: Sweden: Uppsala

text: 59.849056 N 17.623528 E

text: bacterioplankton metagenome

text: not replicate


text: Metagenome or environmental

text: pda|tlumpi@orcid

text: pda|tlumpi@orcid

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: NCBI

text: Sweden: Uppsala

text: 59.849056 N 17.623528 E

text: bacterioplankton metagenome

text: biological replicate 3


text: Metagenome or environmental

text: pda|tlumpi@orcid

text: pda|tlumpi@orcid

text: public

text: NCBI

text: Sweden: Uppsala

text: 59.849056 N 17.623528 E

text: bacterioplankton metagenome

text: biological replicate 2


text: Metagenome or environmental

text: pda|tlumpi@orcid

text: pda|tlumpi@orcid

text: public

text: NCBI

text: Sweden: Uppsala

text: 59.849056 N 17.623528 E

text: bacterioplankton metagenome

text: biological replicate 1


text: Metagenome or environmental

text: pda|tlumpi@orcid

text: pda|tlumpi@orcid

text: public

text: NCBI

text: Sweden: Uppsala

text: 59.849056 N 17.623528 E

text: bacterioplankton metagenome

text: biological replicate 4