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text: chicken MAG catalogue data from Caecum content; animal CA23.10 from cage CA23 with treatment CC

text: Spain

text: El Morell; Tarragona

text: Caecum content

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text: Chicken

text: Control

text: Gallus gallus

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tag: attribute

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characteristic: description

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characteristic: geographic location (country and/or sea)

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characteristic: geographic location (latitude)

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characteristic: geographic location (region and locality)

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characteristic: host breed

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characteristic: host common name

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characteristic: host storage container temperature

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text: D-rex protocol

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text: Shield

text: E-matrix 2ml

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unit: mL

unit: day

type: EXTERNAL LINKS

type: BIOGENIC AMINES

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value: Sample code

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value: Index PCR cycles

value: UCPH

value: Sequencing company

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value: Chicken

value: Lab Process ID

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characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

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text: chicken MAG catalogue data from Caecum content; animal CB01.15 from cage CB01 with treatment CE

characteristic: description

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characteristic: geographic location (country and/or sea)

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characteristic: geographic location (longitude)

text: El Morell; Tarragona

characteristic: geographic location (region and locality)

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characteristic: host body site

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characteristic: host breed

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characteristic: host common name

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characteristic: ENA-CHECKLIST

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text: Caecum content

text: Ross

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text: Gallus gallus

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characteristic: ENA-CHECKLIST

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: El Morell; Tarragona

characteristic: geographic location (region and locality)

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characteristic: host body site

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characteristic: host common name

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characteristic: ENA-CHECKLIST

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text: chicken MAG catalogue data from Caecum content; animal CB03.16 from cage CB03 with treatment CC

text: Spain

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text: Chicken

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text: Gallus gallus

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text: chicken MAG catalogue data from Caecum content; animal CB05.02 from cage CB05 with treatment CO

characteristic: description

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: El Morell; Tarragona

characteristic: geographic location (region and locality)

text: Caecum content

characteristic: host body site

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characteristic: host breed

text: Chicken

characteristic: host common name

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characteristic: host scientific name

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characteristic: ENA-CHECKLIST

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text: Chicken

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text: Gallus gallus

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

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characteristic: geographic location (region and locality)

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characteristic: host body site

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characteristic: host breed

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characteristic: ENA-CHECKLIST

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text: Spain

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text: Caecum content

text: Cobb

text: Chicken

text: Probiotic

text: Gallus gallus

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text: chicken MAG catalogue data from Caecum content; animal CB10.16 from cage CB10 with treatment CC

characteristic: description

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

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characteristic: geographic location (region and locality)

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characteristic: host body site

text: Ross

characteristic: host breed

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characteristic: host common name

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characteristic: ENA-CHECKLIST

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text: Spain

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text: Chicken

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text: Gallus gallus

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text: chicken MAG catalogue data from Caecum content; animal CB15.01 from cage CB15 with treatment CO

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

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characteristic: geographic location (region and locality)

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characteristic: host body site

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characteristic: host breed

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characteristic: host common name

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characteristic: host diet treatment

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characteristic: ENA-CHECKLIST

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text: Probiotic

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text: chicken MAG catalogue data from Caecum content; animal CB19.09 from cage CB19 with treatment CO

characteristic: description

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

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characteristic: geographic location (region and locality)

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characteristic: host body site

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characteristic: host breed

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characteristic: host common name

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characteristic: Submitter Id

text: AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAA;GAACGACATGGCTACGATCCGACTT

characteristic: adapters

text: chicken MAG catalogue data from Caecum content; animal CB20.03 from cage CB20 with treatment CC

text: Spain

text: El Morell; Tarragona

text: Caecum content

text: Ross

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characteristic: ENA-CHECKLIST

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characteristic: ENA-LAST-UPDATE

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characteristic: description

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characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

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characteristic: geographic location (region and locality)

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characteristic: host body site

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characteristic: host breed

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value: Lab Process ID


characteristic: ENA-CHECKLIST

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text: chicken MAG catalogue data from Caecum content; animal CB23.18 from cage CB23 with treatment CO

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text: Caecum content

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text: Chicken

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text: Gallus gallus

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characteristic: host total mass

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characteristic: sample volume or weight for DNA extraction

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characteristic: ENA-CHECKLIST

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characteristic: INSDC center name

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text: Gallus gallus

characteristic: Organism

characteristic: SRA accession

characteristic: collection date

text: chicken MAG catalogue data from Caecum content; animal CC01.18 from cage CC01 with treatment CO

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: El Morell; Tarragona

characteristic: geographic location (region and locality)

text: Caecum content

characteristic: host body site

text: Cobb

characteristic: host breed

text: Chicken

characteristic: host common name

text: Probiotic

characteristic: host diet treatment

text: Gallus gallus

characteristic: host scientific name

text: male

characteristic: host sex

characteristic: host storage container temperature

characteristic: host subject id

characteristic: host taxid

text: D-rex protocol

text: chicken gut metagenome

text: HoloFood

characteristic: project

text: Shield

text: E-matrix 2ml

text: UCPH


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Gallus gallus

characteristic: Organism

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

text: chicken MAG catalogue data from Caecum content; animal CC02.12 from cage CC02 with treatment CO

text: Spain

text: El Morell; Tarragona

text: Caecum content

text: Cobb

text: Chicken

text: Probiotic

text: Gallus gallus

text: female

characteristic: host total mass

text: D-rex protocol

characteristic: nucleic acid extraction

text: chicken gut metagenome

characteristic: organism

text: HoloFood

characteristic: project name

characteristic: reference host genome for decontamination

text: Shield

characteristic: sample storage buffer

text: E-matrix 2ml

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

characteristic: sequencing method

characteristic: title

characteristic: trial length

characteristic: trial timepoint

value: Experiment

value: metagenomics


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Gallus gallus

characteristic: Organism

characteristic: SRA accession

characteristic: collection date

text: chicken MAG catalogue data from Caecum content; animal CC05.02 from cage CC05 with treatment CE

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: El Morell; Tarragona

characteristic: geographic location (region and locality)

text: Caecum content

characteristic: host body site

text: Cobb

characteristic: host breed

text: Chicken

characteristic: host common name

text: Prebiotic

characteristic: host diet treatment

text: Gallus gallus

characteristic: host scientific name

text: female

characteristic: host sex

characteristic: host storage container temperature

characteristic: host subject id

characteristic: host taxid

text: D-rex protocol

text: chicken gut metagenome

text: HoloFood

characteristic: project

text: Shield

text: E-matrix 2ml

text: UCPH

value: ng used for library build

value: Project


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Gallus gallus

characteristic: Organism

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

text: chicken MAG catalogue data from Caecum content; animal CC07.10 from cage CC07 with treatment CE

text: Spain

text: El Morell; Tarragona

text: Caecum content

text: Ross

text: Chicken

text: Prebiotic

text: Gallus gallus

text: male

characteristic: host total mass

text: D-rex protocol

characteristic: nucleic acid extraction

text: chicken gut metagenome

characteristic: organism

text: HoloFood

characteristic: project name

characteristic: reference host genome for decontamination

text: Shield

characteristic: sample storage buffer

text: E-matrix 2ml

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

characteristic: sequencing method

characteristic: title

characteristic: trial length

characteristic: trial timepoint

value: Sample code


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Gallus gallus

characteristic: Organism

characteristic: SRA accession

characteristic: collection date

text: chicken MAG catalogue data from Caecum content; animal CC09.09 from cage CC09 with treatment CO

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: El Morell; Tarragona

characteristic: geographic location (region and locality)

text: Caecum content

characteristic: host body site

text: Ross

characteristic: host breed

text: Chicken

characteristic: host common name

text: Probiotic

characteristic: host diet treatment

text: Gallus gallus

characteristic: host scientific name

text: male

characteristic: host sex

characteristic: host storage container temperature

characteristic: host subject id

characteristic: host taxid

text: D-rex protocol

text: chicken gut metagenome

text: HoloFood

characteristic: project

text: Shield

text: E-matrix 2ml

text: UCPH

value: Body site

value: caecum content


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Gallus gallus

characteristic: Organism

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

text: chicken MAG catalogue data from Caecum content; animal CC09.13 from cage CC09 with treatment CO

text: Spain

text: El Morell; Tarragona

text: Caecum content

text: Ross

text: Chicken

text: Probiotic

text: Gallus gallus

text: male

characteristic: host total mass

text: D-rex protocol

characteristic: nucleic acid extraction

text: chicken gut metagenome

characteristic: organism

text: HoloFood

characteristic: project name

characteristic: reference host genome for decontamination

text: Shield

characteristic: sample storage buffer

text: E-matrix 2ml

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

characteristic: sequencing method

characteristic: title

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characteristic: trial timepoint

value: UCPH

value: Index PCR cycles


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Gallus gallus

characteristic: Organism

characteristic: SRA accession

characteristic: collection date

text: chicken MAG catalogue data from Caecum content; animal CC11.07 from cage CC11 with treatment CC

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: El Morell; Tarragona

characteristic: geographic location (region and locality)

text: Caecum content

characteristic: host body site

text: Cobb

characteristic: host breed

text: Chicken

characteristic: host common name

text: Control

characteristic: host diet treatment

text: Gallus gallus

characteristic: host scientific name

text: female

characteristic: host sex

characteristic: host storage container temperature

characteristic: host subject id

characteristic: host taxid

text: D-rex protocol

text: chicken gut metagenome

text: HoloFood

characteristic: project

text: Shield

text: E-matrix 2ml

text: UCPH

value: Sequencing company

value: BGI


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Gallus gallus

characteristic: Organism

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

text: chicken MAG catalogue data from Caecum content; animal CC11.15 from cage CC11 with treatment CC

text: Spain

text: El Morell; Tarragona

text: Caecum content

text: Cobb

text: Chicken

text: Control

text: Gallus gallus

text: female

characteristic: host total mass

text: D-rex protocol

characteristic: nucleic acid extraction

text: chicken gut metagenome

characteristic: organism

text: HoloFood

characteristic: project name

characteristic: reference host genome for decontamination

text: Shield

characteristic: sample storage buffer

text: E-matrix 2ml

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

characteristic: sequencing method

characteristic: title

characteristic: trial length

characteristic: trial timepoint

value: Pool

value: Raw sequence name


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Gallus gallus

characteristic: Organism

characteristic: SRA accession

characteristic: collection date

text: chicken MAG catalogue data from Caecum content; animal CC12.06 from cage CC12 with treatment CE

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: El Morell; Tarragona

characteristic: geographic location (region and locality)

text: Caecum content

characteristic: host body site

text: Cobb

characteristic: host breed

text: Chicken

characteristic: host common name

text: Prebiotic

characteristic: host diet treatment

text: Gallus gallus

characteristic: host scientific name

text: male

characteristic: host sex

characteristic: host storage container temperature

characteristic: host subject id

characteristic: host taxid

text: D-rex protocol

text: chicken gut metagenome

text: HoloFood

characteristic: project

text: Shield

text: E-matrix 2ml

text: UCPH

value: Organism


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Gallus gallus

characteristic: Organism

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

text: chicken MAG catalogue data from Caecum content; animal CC14.01 from cage CC14 with treatment CO

text: Spain

text: El Morell; Tarragona

text: Caecum content

text: Cobb

text: Chicken

text: Probiotic

text: Gallus gallus

text: female

characteristic: host total mass

text: D-rex protocol

characteristic: nucleic acid extraction

text: chicken gut metagenome

characteristic: organism

text: HoloFood

characteristic: project name

characteristic: reference host genome for decontamination

text: Shield

characteristic: sample storage buffer

text: E-matrix 2ml

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

characteristic: sequencing method

characteristic: title

characteristic: trial length

characteristic: trial timepoint


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Gallus gallus

characteristic: Organism

characteristic: SRA accession

characteristic: collection date

text: chicken MAG catalogue data from Caecum content; animal CC14.08 from cage CC14 with treatment CO

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: El Morell; Tarragona

characteristic: geographic location (region and locality)

text: Caecum content

characteristic: host body site

text: Cobb

characteristic: host breed

text: Chicken

characteristic: host common name

text: Probiotic

characteristic: host diet treatment

text: Gallus gallus

characteristic: host scientific name

text: female

characteristic: host sex

characteristic: host storage container temperature

characteristic: host subject id

characteristic: host taxid

text: D-rex protocol

text: chicken gut metagenome

text: HoloFood

characteristic: project

text: Shield

text: E-matrix 2ml

text: UCPH


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Gallus gallus

characteristic: Organism

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

text: chicken MAG catalogue data from Caecum content; animal CC14.17 from cage CC14 with treatment CO

text: Spain

text: El Morell; Tarragona

text: Caecum content

text: Cobb

text: Chicken

text: Probiotic

text: Gallus gallus

text: female

characteristic: host total mass

text: D-rex protocol

characteristic: nucleic acid extraction

text: chicken gut metagenome

characteristic: organism

text: HoloFood

characteristic: project name

characteristic: reference host genome for decontamination

text: Shield

characteristic: sample storage buffer

text: E-matrix 2ml

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

characteristic: sequencing method

characteristic: title

characteristic: trial length

characteristic: trial timepoint


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Gallus gallus

characteristic: Organism

characteristic: SRA accession

text: AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAA;GAACGACATGGCTACGATCCGACTT

characteristic: collection date

text: chicken MAG catalogue data from Caecum content; animal CC17.12 from cage CC17 with treatment CC

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: El Morell; Tarragona

characteristic: geographic location (region and locality)

text: Caecum content

characteristic: host body site

text: Cobb

characteristic: host breed

text: Chicken

characteristic: host common name

text: Control

characteristic: host diet treatment

text: Gallus gallus

characteristic: host scientific name

text: male

characteristic: host sex

characteristic: host storage container temperature

characteristic: host subject id

characteristic: host taxid

text: D-rex protocol

text: chicken gut metagenome

text: HoloFood

characteristic: project

text: Shield

text: E-matrix 2ml

text: UCPH

value: Chicken


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Gallus gallus

characteristic: Organism

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

text: chicken MAG catalogue data from Caecum content; animal CC19.18 from cage CC19 with treatment CC

text: Spain

text: El Morell; Tarragona

text: Caecum content

text: Ross

text: Chicken

text: Control

text: Gallus gallus

text: male

characteristic: host total mass

text: D-rex protocol

characteristic: nucleic acid extraction

text: chicken gut metagenome

characteristic: organism

text: HoloFood

characteristic: project name

characteristic: reference host genome for decontamination

text: Shield

characteristic: sample storage buffer

text: E-matrix 2ml

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

characteristic: sequencing method

characteristic: title

characteristic: trial length

characteristic: trial timepoint

value: HoloFood


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Gallus gallus

characteristic: Organism

characteristic: SRA accession

characteristic: collection date

text: chicken MAG catalogue data from Caecum content; animal CC20.14 from cage CC20 with treatment CC

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: El Morell; Tarragona

characteristic: geographic location (region and locality)

text: Caecum content

characteristic: host body site

text: Cobb

characteristic: host breed

text: Chicken

characteristic: host common name

text: Control

characteristic: host diet treatment

text: Gallus gallus

characteristic: host scientific name

text: female

characteristic: host sex

characteristic: host storage container temperature

characteristic: host subject id

characteristic: host taxid

text: D-rex protocol

text: chicken gut metagenome

text: HoloFood

characteristic: project

text: HoloFood Chicken - MAG Catalogue from Caecum content

text: Shield

text: E-matrix 2ml

text: UCPH

value: Lab Process ID


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Gallus gallus

characteristic: Organism

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

text: chicken MAG catalogue data from Caecum content; animal CC21.08 from cage CC21 with treatment CE

text: Spain

text: El Morell; Tarragona

text: Caecum content

text: Ross

text: Chicken

text: Prebiotic

text: Gallus gallus

text: male

characteristic: host total mass

text: D-rex protocol

characteristic: nucleic acid extraction

text: chicken gut metagenome

characteristic: organism

text: HoloFood

characteristic: project name

characteristic: reference host genome for decontamination

text: Shield

characteristic: sample storage buffer

text: E-matrix 2ml

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

characteristic: sequencing method

characteristic: title

characteristic: trial length

characteristic: trial timepoint

value: Experiment


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Gallus gallus

characteristic: Organism

characteristic: SRA accession

characteristic: collection date

text: chicken MAG catalogue data from Caecum content; animal CC21.15 from cage CC21 with treatment CE

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: El Morell; Tarragona

characteristic: geographic location (region and locality)

text: Caecum content

characteristic: host body site

text: Ross

characteristic: host breed

text: Chicken

characteristic: host common name

text: Prebiotic

characteristic: host diet treatment

text: Gallus gallus

characteristic: host scientific name

text: male

characteristic: host sex

characteristic: host storage container temperature

characteristic: host subject id

characteristic: host taxid

text: D-rex protocol

text: chicken gut metagenome

text: HoloFood

characteristic: project

text: Shield

text: E-matrix 2ml

text: UCPH

value: metagenomics


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Gallus gallus

characteristic: Organism

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

text: chicken MAG catalogue data from Caecum content; animal CC22.10 from cage CC22 with treatment CC

text: Spain

text: El Morell; Tarragona

text: Caecum content

text: Ross

text: Chicken

text: Control

text: Gallus gallus

text: female

characteristic: host total mass

text: D-rex protocol

characteristic: nucleic acid extraction

text: chicken gut metagenome

characteristic: organism

text: HoloFood

characteristic: project name

characteristic: reference host genome for decontamination

text: Shield

characteristic: sample storage buffer

text: E-matrix 2ml

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

characteristic: sequencing method

characteristic: title

characteristic: trial length

characteristic: trial timepoint

value: ng used for library build


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Gallus gallus

characteristic: Organism

characteristic: SRA accession

characteristic: collection date

text: chicken MAG catalogue data from Caecum content; animal CC22.15 from cage CC22 with treatment CC

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: El Morell; Tarragona

characteristic: geographic location (region and locality)

text: Caecum content

characteristic: host body site

text: Ross

characteristic: host breed

text: Chicken

characteristic: host common name

text: Control

characteristic: host diet treatment

text: Gallus gallus

characteristic: host scientific name

text: female

characteristic: host sex

characteristic: host storage container temperature

characteristic: host subject id

characteristic: host taxid

text: D-rex protocol

text: chicken gut metagenome

text: HoloFood

characteristic: project

text: Shield

text: E-matrix 2ml

text: UCPH

value: Project

value: too low


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Gallus gallus

characteristic: Organism

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

text: chicken MAG catalogue data from Ileum content; animal CA03.14 from cage CA03 with treatment CO

text: Spain

text: El Morell; Tarragona

text: Ileum content

text: Cobb

text: Chicken

text: Probiotic

text: Gallus gallus

text: female

characteristic: host total mass

text: D-rex protocol

characteristic: nucleic acid extraction

text: chicken gut metagenome

characteristic: organism

text: HoloFood

text: HoloFood Chicken - MAG Catalogue from Ileum content

characteristic: project name

characteristic: reference host genome for decontamination

text: Shield

characteristic: sample storage buffer

text: E-matrix 2ml

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

characteristic: sequencing method

characteristic: title

characteristic: trial length

characteristic: trial timepoint

value: Sample code

value: Body site

value: ileum content


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Gallus gallus

characteristic: Organism

characteristic: SRA accession

characteristic: collection date

text: chicken MAG catalogue data from Ileum content; animal CA06.05 from cage CA06 with treatment CO

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: El Morell; Tarragona

characteristic: geographic location (region and locality)

text: Ileum content

characteristic: host body site

text: Cobb

characteristic: host breed

text: Chicken

characteristic: host common name

text: Probiotic

characteristic: host diet treatment

text: Gallus gallus

characteristic: host scientific name

text: male

characteristic: host sex

characteristic: host storage container temperature

characteristic: host subject id

characteristic: host taxid

text: D-rex protocol

text: chicken gut metagenome

text: HoloFood

characteristic: project

text: Shield

text: E-matrix 2ml

text: UCPH

value: Index PCR cycles

value: UCPH


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Gallus gallus

characteristic: Organism

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

text: chicken MAG catalogue data from Ileum content; animal CA13.03 from cage CA13 with treatment CE

text: Spain

text: El Morell; Tarragona

text: Ileum content

text: Cobb

text: Chicken

text: Prebiotic

text: Gallus gallus

text: male

characteristic: host total mass

text: D-rex protocol

characteristic: nucleic acid extraction

text: chicken gut metagenome

characteristic: organism

text: HoloFood

characteristic: project name

characteristic: reference host genome for decontamination

text: Shield

characteristic: sample storage buffer

text: E-matrix 2ml

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

characteristic: sequencing method

characteristic: title

characteristic: trial length

characteristic: trial timepoint

value: Sequencing company

value: BGI


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Gallus gallus

characteristic: Organism

characteristic: SRA accession

characteristic: collection date

text: chicken MAG catalogue data from Ileum content; animal CA19.13 from cage CA19 with treatment CO

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: El Morell; Tarragona

characteristic: geographic location (region and locality)

text: Ileum content

characteristic: host body site

text: Ross

characteristic: host breed

text: Chicken

characteristic: host common name

text: Probiotic

characteristic: host diet treatment

text: Gallus gallus

characteristic: host scientific name

text: female

characteristic: host sex

characteristic: host storage container temperature

characteristic: host subject id

characteristic: host taxid

text: D-rex protocol

text: chicken gut metagenome

text: HoloFood

characteristic: project

text: Shield

text: E-matrix 2ml

text: UCPH

value: Raw sequence name


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Gallus gallus

characteristic: Organism

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

text: chicken MAG catalogue data from Ileum content; animal CA19.18 from cage CA19 with treatment CO

text: Spain

text: El Morell; Tarragona

text: Ileum content

text: Ross

text: Chicken

text: Probiotic

text: Gallus gallus

text: female

characteristic: host total mass

text: D-rex protocol

characteristic: nucleic acid extraction

text: chicken gut metagenome

characteristic: organism

text: HoloFood

characteristic: project name

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text: Shield

characteristic: sample storage buffer

text: E-matrix 2ml

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

characteristic: sequencing method

characteristic: title

characteristic: trial length

characteristic: trial timepoint

value: Pool

value: Organism


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Gallus gallus

characteristic: Organism

characteristic: SRA accession

characteristic: collection date

text: chicken MAG catalogue data from Ileum content; animal CA21.09 from cage CA21 with treatment CE

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: El Morell; Tarragona

characteristic: geographic location (region and locality)

text: Ileum content

characteristic: host body site

text: Ross

characteristic: host breed

text: Chicken

characteristic: host common name

text: Prebiotic

characteristic: host diet treatment

text: Gallus gallus

characteristic: host scientific name

text: male

characteristic: host sex

characteristic: host storage container temperature

characteristic: host subject id

characteristic: host taxid

text: D-rex protocol

text: chicken gut metagenome

text: HoloFood

characteristic: project

text: Shield

text: E-matrix 2ml

text: UCPH

value: Chicken


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Gallus gallus

characteristic: Organism

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

text: chicken MAG catalogue data from Ileum content; animal CA24.01 from cage CA24 with treatment CE

text: Spain

text: El Morell; Tarragona

text: Ileum content

text: Ross

text: Chicken

text: Prebiotic

text: Gallus gallus

text: female

characteristic: host total mass

text: D-rex protocol

characteristic: nucleic acid extraction

text: chicken gut metagenome

characteristic: organism

text: HoloFood

characteristic: project name

characteristic: reference host genome for decontamination

text: Shield

characteristic: sample storage buffer

text: E-matrix 2ml

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

characteristic: sequencing method

characteristic: title

characteristic: trial length

characteristic: trial timepoint

value: Lab Process ID


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Gallus gallus

characteristic: Organism

characteristic: SRA accession

text: AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAA;GAACGACATGGCTACGATCCGACTT

characteristic: collection date

text: chicken MAG catalogue data from Ileum content; animal CB07.06 from cage CB07 with treatment CE

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: El Morell; Tarragona

characteristic: geographic location (region and locality)

text: Ileum content

characteristic: host body site

text: Cobb

characteristic: host breed

text: Chicken

characteristic: host common name

text: Prebiotic

characteristic: host diet treatment

text: Gallus gallus

characteristic: host scientific name

text: male

characteristic: host sex

characteristic: host storage container temperature

characteristic: host subject id

characteristic: host taxid

text: D-rex protocol

text: chicken gut metagenome

text: HoloFood

characteristic: project

text: Shield

text: E-matrix 2ml

text: UCPH

value: Experiment

value: HoloFood


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Gallus gallus

characteristic: Organism

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

text: chicken MAG catalogue data from Ileum content; animal CB20.03 from cage CB20 with treatment CC

text: Spain

text: El Morell; Tarragona

text: Ileum content

text: Ross

text: Chicken

text: Control

text: Gallus gallus

text: male

characteristic: host total mass

text: D-rex protocol

characteristic: nucleic acid extraction

text: chicken gut metagenome

characteristic: organism

text: HoloFood

characteristic: project name

characteristic: reference host genome for decontamination

text: Shield

characteristic: sample storage buffer

text: E-matrix 2ml

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

characteristic: sequencing method

characteristic: title

characteristic: trial length

characteristic: trial timepoint

value: metagenomics

value: ng used for library build


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Gallus gallus

characteristic: Organism

characteristic: SRA accession

characteristic: collection date

text: chicken MAG catalogue data from Ileum content; animal CC09.13 from cage CC09 with treatment CO

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: El Morell; Tarragona

characteristic: geographic location (region and locality)

text: Ileum content

characteristic: host body site

text: Ross

characteristic: host breed

text: Chicken

characteristic: host common name

text: Probiotic

characteristic: host diet treatment

text: Gallus gallus

characteristic: host scientific name

text: male

characteristic: host sex

characteristic: host storage container temperature

characteristic: host subject id

characteristic: host taxid

text: D-rex protocol

text: chicken gut metagenome

text: HoloFood

characteristic: project

text: Shield

text: E-matrix 2ml

text: UCPH

value: Project


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Gallus gallus

characteristic: Organism

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

text: chicken MAG catalogue data from Ileum content; animal CC19.18 from cage CC19 with treatment CC

text: Spain

text: El Morell; Tarragona

text: Ileum content

text: Ross

text: Chicken

text: Control

text: Gallus gallus

text: male

characteristic: host total mass

text: D-rex protocol

characteristic: nucleic acid extraction

text: chicken gut metagenome

characteristic: organism

text: HoloFood

characteristic: project name

characteristic: reference host genome for decontamination

text: Shield

characteristic: sample storage buffer

text: E-matrix 2ml

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

characteristic: sequencing method

characteristic: title

characteristic: trial length

characteristic: trial timepoint

value: Sample code


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Gallus gallus

characteristic: Organism

characteristic: SRA accession

characteristic: collection date

text: chicken MAG catalogue data from Ileum content; animal CC20.14 from cage CC20 with treatment CC

characteristic: description

text: Spain

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: El Morell; Tarragona

characteristic: geographic location (region and locality)

text: Ileum content

characteristic: host body site

text: Cobb

characteristic: host breed

text: Chicken

characteristic: host common name

text: Control

characteristic: host diet treatment

text: Gallus gallus

characteristic: host scientific name

text: female

characteristic: host sex

characteristic: host storage container temperature

characteristic: host subject id

characteristic: host taxid

text: D-rex protocol

text: chicken gut metagenome

text: HoloFood

characteristic: project

text: Shield

text: E-matrix 2ml

text: UCPH


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Salmo salar

characteristic: Organism

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

text: Salmon metagenomic DNA data from Distal gut content; animal SB10.13 from tank SB10 with treatment Neptune

text: Norway

text: Dønna; Nordland county

text: Distal gut content

text: Atlantic salmon

text: Sanford Blue Mussel Meal

characteristic: host diet

text: Neptune: SB 13.1% blue mussel meal

unit: % mass

characteristic: host diet treatment concentration

text: Wounded:-

characteristic: host disease status

characteristic: host gutted mass

unit: cm

characteristic: host length

text: Salmo salar

text: LetSea Tank: Neptune

characteristic: host storage container

characteristic: host storage container pH

characteristic: host total mass

text: D-rex protocol

characteristic: nucleic acid extraction

text: fish gut metagenome

characteristic: organism

text: HoloFood

text: HoloFood Salmon - Metagenomic DNA

characteristic: project name

characteristic: reference host genome for decontamination

text: Shield

characteristic: sample storage buffer

text: 2ml E-matrix

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

characteristic: sequencing method

characteristic: title

characteristic: trial timepoint

value: Salmon


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Salmo salar

characteristic: Organism

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Salmon metagenomic DNA data from Distal gut content; animal SA01.01 from tank SA01 with treatment Tiger

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Dønna; Nordland county

characteristic: geographic location (region and locality)

text: Distal gut content

characteristic: host body site

text: Atlantic salmon

characteristic: host common name

text: Fermented algae meal (added in in oil coating)

characteristic: host diet

text: Tiger: SA Control

characteristic: host diet treatment

characteristic: host diet treatment concentration

text: Wounded:-

characteristic: host disease status

characteristic: host gutted mass

text: Salmo salar

characteristic: host scientific name

text: LetSea Tank: Tiger

characteristic: host storage container temperature

characteristic: host subject id

characteristic: host taxid

text: D-rex protocol

text: fish gut metagenome

text: HoloFood

characteristic: project

text: HoloFood Salmon - Metagenomic DNA

text: Shield

text: 2ml E-matrix

text: UCPH

value: Omics

value: Metagenomics


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Salmo salar

characteristic: Organism

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Salmon metagenomic DNA data from Distal gut content; animal SA01.03 from tank SA01 with treatment Tiger

characteristic: description

text: Norway

text: Dønna; Nordland county

text: Distal gut content

text: Atlantic salmon

text: Tiger: SA Control

text: Wounded:-

characteristic: host length

text: Salmo salar

text: LetSea Tank: Tiger

characteristic: host storage container

characteristic: host storage container pH

characteristic: host total mass

text: D-rex protocol

characteristic: nucleic acid extraction

text: fish gut metagenome

characteristic: organism

text: HoloFood

text: HoloFood Salmon - Metagenomic DNA

characteristic: project name

characteristic: reference host genome for decontamination

text: Shield

characteristic: sample storage buffer

text: 2ml E-matrix

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

characteristic: sequencing method

characteristic: title

characteristic: trial timepoint

value: Body site

value: distal gut content

value: Index PCR cycles

value: UCPH

value: Fermented algae meal (added in in oil coating)


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Salmo salar

characteristic: Organism

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Salmon metagenomic DNA data from Distal gut content; animal SA01.04 from tank SA01 with treatment Tiger

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Dønna; Nordland county

characteristic: geographic location (region and locality)

text: Distal gut content

characteristic: host body site

text: Atlantic salmon

characteristic: host common name

characteristic: host diet

text: Tiger: SA Control

characteristic: host diet treatment

characteristic: host diet treatment concentration

text: Wounded:-

characteristic: host disease status

characteristic: host gutted mass

text: Salmo salar

characteristic: host scientific name

text: LetSea Tank: Tiger

characteristic: host storage container temperature

characteristic: host subject id

characteristic: host taxid

text: D-rex protocol

text: fish gut metagenome

text: HoloFood

characteristic: project

text: HoloFood Salmon - Metagenomic DNA

text: Shield

text: 2ml E-matrix

text: UCPH

value: Organism

value: Sequencing company

value: BGI


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Salmo salar

characteristic: Organism

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Salmon metagenomic DNA data from Distal gut content; animal SA01.11 from tank SA01 with treatment Tiger

characteristic: description

text: Norway

text: Dønna; Nordland county

text: Distal gut content

text: Atlantic salmon

text: Tiger: SA Control

text: Wounded:-

characteristic: host length

text: Salmo salar

text: LetSea Tank: Tiger

characteristic: host storage container

characteristic: host storage container pH

characteristic: host total mass

text: D-rex protocol

characteristic: nucleic acid extraction

text: fish gut metagenome

characteristic: organism

text: HoloFood

text: HoloFood Salmon - Metagenomic DNA

characteristic: project name

characteristic: reference host genome for decontamination

text: Shield

characteristic: sample storage buffer

text: 2ml E-matrix

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

characteristic: sequencing method

characteristic: title

characteristic: trial timepoint

value: Pool


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Salmo salar

characteristic: Organism

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Salmon metagenomic DNA data from Distal gut content; animal SA01.12 from tank SA01 with treatment Tiger

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Dønna; Nordland county

characteristic: geographic location (region and locality)

text: Distal gut content

characteristic: host body site

text: Atlantic salmon

characteristic: host common name

characteristic: host diet

text: Tiger: SA Control

characteristic: host diet treatment

characteristic: host diet treatment concentration

text: Wounded:-

characteristic: host disease status

characteristic: host gutted mass

text: Salmo salar

characteristic: host scientific name

text: LetSea Tank: Tiger

characteristic: host storage container temperature

characteristic: host subject id

characteristic: host taxid

text: D-rex protocol

text: fish gut metagenome

text: HoloFood

characteristic: project

text: HoloFood Salmon - Metagenomic DNA

text: Shield

text: 2ml E-matrix

text: UCPH

value: Raw seq. name


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Salmo salar

characteristic: Organism

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Salmon metagenomic DNA data from Distal gut content; animal SA01.13 from tank SA01 with treatment Tiger

characteristic: description

text: Norway

text: Dønna; Nordland county

text: Distal gut content

text: Atlantic salmon

text: Tiger: SA Control

text: Wounded:-

characteristic: host length

text: Salmo salar

text: LetSea Tank: Tiger

characteristic: host storage container

characteristic: host storage container pH

characteristic: host total mass

text: D-rex protocol

characteristic: nucleic acid extraction

text: fish gut metagenome

characteristic: organism

text: HoloFood

text: HoloFood Salmon - Metagenomic DNA

characteristic: project name

characteristic: reference host genome for decontamination

text: Shield

characteristic: sample storage buffer

text: 2ml E-matrix

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

characteristic: sequencing method

characteristic: title

characteristic: trial timepoint

value: HoloFood


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Salmo salar

characteristic: Organism

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Salmon metagenomic DNA data from Distal gut content; animal SA01.14 from tank SA01 with treatment Tiger

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Dønna; Nordland county

characteristic: geographic location (region and locality)

text: Distal gut content

characteristic: host body site

text: Atlantic salmon

characteristic: host common name

characteristic: host diet

text: Tiger: SA Control

characteristic: host diet treatment

characteristic: host diet treatment concentration

text: Wounded:-

characteristic: host disease status

characteristic: host gutted mass

text: Salmo salar

characteristic: host scientific name

text: LetSea Tank: Tiger

characteristic: host storage container temperature

characteristic: host subject id

characteristic: host taxid

text: D-rex protocol

text: fish gut metagenome

text: HoloFood

characteristic: project

text: HoloFood Salmon - Metagenomic DNA

text: Shield

text: 2ml E-matrix

text: UCPH

value: Lab Process ID


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Salmo salar

characteristic: Organism

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Salmon metagenomic DNA data from Distal gut content; animal SA01.15 from tank SA01 with treatment Tiger

characteristic: description

text: Norway

text: Dønna; Nordland county

text: Distal gut content

text: Atlantic salmon

text: Tiger: SA Control

text: Wounded:-

characteristic: host length

text: Salmo salar

text: LetSea Tank: Tiger

characteristic: host storage container

characteristic: host storage container pH

characteristic: host total mass

text: D-rex protocol

characteristic: nucleic acid extraction

text: fish gut metagenome

characteristic: organism

text: HoloFood

text: HoloFood Salmon - Metagenomic DNA

characteristic: project name

characteristic: reference host genome for decontamination

text: Shield

characteristic: sample storage buffer

text: 2ml E-matrix

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

characteristic: sequencing method

characteristic: title

characteristic: trial timepoint

value: Project


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Salmo salar

characteristic: Organism

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Salmon metagenomic DNA data from Distal gut content; animal SA01.16 from tank SA01 with treatment Tiger

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Dønna; Nordland county

characteristic: geographic location (region and locality)

text: Distal gut content

characteristic: host body site

text: Atlantic salmon

characteristic: host common name

characteristic: host diet

text: Tiger: SA Control

characteristic: host diet treatment

characteristic: host diet treatment concentration

text: Wounded:-

characteristic: host disease status

characteristic: host gutted mass

text: Salmo salar

characteristic: host scientific name

text: LetSea Tank: Tiger

characteristic: host storage container temperature

characteristic: host subject id

characteristic: host taxid

text: D-rex protocol

text: fish gut metagenome

text: HoloFood

characteristic: project

text: HoloFood Salmon - Metagenomic DNA

text: Shield

text: 2ml E-matrix

text: UCPH


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Salmo salar

characteristic: Organism

characteristic: SRA accession

characteristic: Submitter Id

text: AAGTCGGAGGCCAAGCGGTCTTAGGAAGACAA;GAACGACATGGCTACGATCCGACTT

characteristic: adapters

characteristic: collection date

text: Salmon metagenomic DNA data from Distal gut content; animal SA01.17 from tank SA01 with treatment Tiger

characteristic: description

text: Norway

text: Dønna; Nordland county

text: Distal gut content

text: Atlantic salmon

text: Tiger: SA Control

text: Wounded:-

characteristic: host length

text: Salmo salar

text: LetSea Tank: Tiger

characteristic: host storage container

characteristic: host storage container pH

characteristic: host total mass

text: D-rex protocol

characteristic: nucleic acid extraction

text: fish gut metagenome

characteristic: organism

text: HoloFood

text: HoloFood Salmon - Metagenomic DNA

characteristic: project name

characteristic: reference host genome for decontamination

text: Shield

characteristic: sample storage buffer

text: 2ml E-matrix

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

characteristic: sequencing method

characteristic: title

characteristic: trial timepoint


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Salmo salar

characteristic: Organism

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Salmon metagenomic DNA data from Distal gut content; animal SA01.18 from tank SA01 with treatment Tiger

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Dønna; Nordland county

characteristic: geographic location (region and locality)

text: Distal gut content

characteristic: host body site

text: Atlantic salmon

characteristic: host common name

characteristic: host diet

text: Tiger: SA Control

characteristic: host diet treatment

characteristic: host diet treatment concentration

text: Wounded:-

characteristic: host disease status

characteristic: host gutted mass

text: Salmo salar

characteristic: host scientific name

text: LetSea Tank: Tiger

characteristic: host storage container temperature

characteristic: host subject id

characteristic: host taxid

text: D-rex protocol

text: fish gut metagenome

text: HoloFood

characteristic: project

text: HoloFood Salmon - Metagenomic DNA

text: Shield

text: 2ml E-matrix

text: UCPH

value: Sample code


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Salmo salar

characteristic: Organism

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Salmon metagenomic DNA data from Distal gut content; animal SA01.19 from tank SA01 with treatment Tiger

characteristic: description

text: Norway

text: Dønna; Nordland county

text: Distal gut content

text: Atlantic salmon

text: Tiger: SA Control

text: Wounded:-

characteristic: host length

text: Salmo salar

text: LetSea Tank: Tiger

characteristic: host storage container

characteristic: host storage container pH

characteristic: host total mass

text: D-rex protocol

characteristic: nucleic acid extraction

text: fish gut metagenome

characteristic: organism

text: HoloFood

text: HoloFood Salmon - Metagenomic DNA

characteristic: project name

characteristic: reference host genome for decontamination

text: Shield

characteristic: sample storage buffer

text: 2ml E-matrix

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

characteristic: sequencing method

characteristic: title

characteristic: trial timepoint


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Salmo salar

characteristic: Organism

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Salmon metagenomic DNA data from Distal gut content; animal SA01.20 from tank SA01 with treatment Tiger

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Dønna; Nordland county

characteristic: geographic location (region and locality)

text: Distal gut content

characteristic: host body site

text: Atlantic salmon

characteristic: host common name

characteristic: host diet

text: Tiger: SA Control

characteristic: host diet treatment

characteristic: host diet treatment concentration

text: Wounded:-

characteristic: host disease status

characteristic: host gutted mass

text: Salmo salar

characteristic: host scientific name

text: LetSea Tank: Tiger

characteristic: host storage container temperature

characteristic: host subject id

characteristic: host taxid

text: D-rex protocol

text: fish gut metagenome

text: HoloFood

characteristic: project

text: HoloFood Salmon - Metagenomic DNA

text: Shield

text: 2ml E-matrix

text: UCPH


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Salmo salar

characteristic: Organism

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Salmon metagenomic DNA data from Distal gut content; animal SA01.21 from tank SA01 with treatment Tiger

characteristic: description

text: Norway

text: Dønna; Nordland county

text: Distal gut content

text: Atlantic salmon

text: Tiger: SA Control

text: Wounded:-

characteristic: host length

text: Salmo salar

text: LetSea Tank: Tiger

characteristic: host storage container

characteristic: host storage container pH

characteristic: host total mass

text: D-rex protocol

characteristic: nucleic acid extraction

text: fish gut metagenome

characteristic: organism

text: HoloFood

text: HoloFood Salmon - Metagenomic DNA

characteristic: project name

characteristic: reference host genome for decontamination

text: Shield

characteristic: sample storage buffer

text: 2ml E-matrix

characteristic: sample storage container

text: UCPH

characteristic: sample storage location

characteristic: sample storage temperature

characteristic: sample volume or weight for DNA extraction

characteristic: sequencing method

characteristic: title

characteristic: trial timepoint


characteristic: ENA-CHECKLIST

characteristic: ENA-FIRST-PUBLIC

characteristic: ENA-LAST-UPDATE

characteristic: External Id

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center alias

text: UNIVERSITY OF COPENHAGEN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: public

characteristic: INSDC status

text: Salmo salar

characteristic: Organism

characteristic: SRA accession

characteristic: Submitter Id

characteristic: adapters

characteristic: collection date

text: Salmon metagenomic DNA data from Distal gut content; animal SA01.22 from tank SA01 with treatment Tiger

characteristic: description

text: Norway

characteristic: geographic location (country and/or sea)

characteristic: geographic location (latitude)

characteristic: geographic location (longitude)

text: Dønna; Nordland county

characteristic: geographic location (region and locality)

text: Distal gut content

characteristic: host body site

text: Atlantic salmon

characteristic: host common name

characteristic: host diet

text: Tiger: SA Control

characteristic: host diet treatment

characteristic: host diet treatment concentration

text: Wounded:-

characteristic: host disease status

characteristic: host gutted mass

text: Salmo salar

characteristic: host scientific name

text: LetSea Tank: Tiger

characteristic: host storage container temperature

characteristic: host subject id

characteristic: host taxid

text: D-rex protocol

text: fish gut metagenome

text: HoloFood

characteristic: project

text: HoloFood Salmon - Metagenomic DNA

text: Shield

text: 2ml E-matrix

text: UCPH

value: Experiment

value: metagenomics

value: Salmon