characteristic: External Id

text: dairy| other (confectionery)

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: UC Davis

characteristic: collection date

text: USA:CA

characteristic: geo loc name

text: ice cream bar

text: ice cream bar:FOODON_03302564

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

text: food


status: PUBLIC

text: beans| sprouts

tag: attribute

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: FDA

characteristic: collected by

characteristic: fda lab id

text: USA:CA

text: soy bean sprout

characteristic: isolation source

text: soy sprout:CURATION_0001519| soybean (whole):FOODON_03301415

characteristic: ontological term

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: project name

text: United States Food and Drug Administration|Office of Regulatory Affairs|San Francisco Laboratory

characteristic: sequenced by

text: food

characteristic: source type

characteristic: strain

text: Pathogen: environmental/food/other sample from Listeria monocytogenes

characteristic: title


FDA895868 C1-1

characteristic: External Id

text: herbs

text: FDA/CFSAN

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FDA

characteristic: collection date

text: 895868 C1-1

text: Lebanon

text: mixed thyme

text: thyme food product:FOODON_00002312

text: Salmonella enterica

text: GenomeTrakr

text: United States Food and Drug Administration|Office of Regulatory Affairs|Northeast Food and Feed Laboratory

text: food

text: FDA895868 C1-1

text: Pathogen: environmental/food/other sample from Salmonella enterica


FDA895868 C2-27

text: herbs

characteristic: IFSAC+ Category

text: FDA/CFSAN

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: FDA

text: 895868 C2-27

text: Lebanon

characteristic: geo loc name

text: mixed thyme

text: thyme food product:FOODON_00002312

text: Salmonella enterica

characteristic: organism

text: GenomeTrakr

text: food

text: FDA895868 C2-27


text: live

text: Pathogen.env

characteristic: NCBI submission package

text: FDA

characteristic: collected by

characteristic: fda lab id

text: India

text: nehari masala (mixed spices)

characteristic: isolation source

text: Salmonella enterica

text: GenomeTrakr

characteristic: project name

text: United States Food and Drug Administration|Office of Regulatory Affairs|Southeast Food and Feed Laboratory


characteristic: External Id

text: other (confectionery)| pome fruit

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA

text: USA

text: caramel apple

text: caramel:FOODON_03317034| apple (whole):FOODON_00002473

characteristic: ontological term

text: Listeria monocytogenes

text: GenomeTrakr

text: United States Food and Drug Administration|Office of Regulatory Affairs|Arkansas Laboratory

characteristic: sequenced by

text: food

characteristic: source type

characteristic: strain

characteristic: title


text: pork

characteristic: IFSAC+ Category

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: Minnesota Department of Health

characteristic: collection date

text: USA:MN

text: raw pork

text: pork (raw):FOODON_03302735

text: Listeria monocytogenes

text: food


text: Health Canada

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Bureau of Microbial Hazards

text: Vibrio parahaemolyticus O11:KUT

characteristic: description

text: Canada: Ontario

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: Gastroenteritis

characteristic: host disease

text: Vibrio parahaemolyticus

characteristic: organism

characteristic: serovar

text: Pathogen: clinical or host-associated sample from Vibrio parahaemolyticus


characteristic: External Id

text: Health Canada

text: live

text: Pathogen.cl

text: Bureau of Microbial Hazards

characteristic: collected by

text: Vibrio parahaemolyticus O5:KUT

text: Canada: Alberta

text: Homo sapiens

text: Gastroenteritis

text: Vibrio parahaemolyticus

characteristic: strain

text: Vibrio parahaemolyticus O5:KUT

characteristic: title


text: Health Canada

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

text: Bureau of Microbial Hazards

text: Vibrio parahaemolyticus O2:K3

text: Canada: Alberta

text: Homo sapiens

text: Gastroenteritis

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus O2:K3


text: Health Canada

characteristic: INSDC center name

text: live

text: Pathogen.cl

characteristic: SRA accession

text: Bureau of Microbial Hazards

characteristic: collection date

text: Vibrio parahaemolyticus O1:K58

text: Canada: Alberta

text: Homo sapiens

text: Gastroenteritis

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus O1:K58


text: Health Canada

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Bureau of Microbial Hazards

text: Vibrio parahaemolyticus O1:KUT

text: Canada: British Columbia

text: Homo sapiens

text: Gastroenteritis

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus O1:KUT


text: Health Canada

text: live

text: Pathogen.cl

text: Bureau of Microbial Hazards

text: Vibrio parahaemolyticus O3:K6

characteristic: description

text: Canada: British Columbia

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: Gastroenteritis

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus O3:K6


text: Health Canada

text: live

text: Pathogen.cl

text: Bureau of Microbial Hazards

text: Vibrio parahaemolyticus O8:KUT

text: Canada: British Columbia

text: Homo sapiens

text: Gastroenteritis

characteristic: host disease

text: Vibrio parahaemolyticus

characteristic: organism

characteristic: serovar

text: Vibrio parahaemolyticus O8:KUT


characteristic: External Id

text: Health Canada

text: live

text: Pathogen.cl

text: Bureau of Microbial Hazards

characteristic: collected by

text: Vibrio parahaemolyticus O1:K56

text: Canada: British Columbia

text: Homo sapiens

text: Gastroenteritis

text: Vibrio parahaemolyticus

characteristic: strain

text: Vibrio parahaemolyticus O1:K56


text: Health Canada

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.cl

text: Bureau of Microbial Hazards

text: Vibrio parahaemolyticus O6:K18

text: Canada: British Columbia

text: Homo sapiens

text: Gastroenteritis

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus O6:K18

characteristic: title


text: Health Canada

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: SRA accession

text: Bureau of Microbial Hazards

text: Vibrio parahaemolyticus O1:K58

text: Canada: British Columbia

text: Homo sapiens

text: Gastroenteritis

text: Vibrio parahaemolyticus

text: Vibrio parahaemolyticus O1:K58


text: Volcani Research Center

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

text: MIGS/MIMS/MIMARKS.plant-associated

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:6.0

text: Wheat rhizosphere

characteristic: env biome

characteristic: env feature

text: soil

text: Israel: West Negev region

text: Triticum turgidum

text: PMID: 25232638

text: 31.21 N 34.27 E

characteristic: lat lon

text: Stutzerimonas stutzeri

text: PMID: 25232638

text: MIGS Cultured Bacterial/Archaeal sample from Stutzerimonas stutzeri


text: Agriculture & Agri-Food Canada

text: live

text: Invertebrate

characteristic: NCBI submission package

text: adult

characteristic: age

characteristic: altitude

text: Dr. Jeffrey Skevington

characteristic: biomaterial provider

text: J. Skevington

characteristic: depth

text: adult

characteristic: dev stage

text: not available

text: Indonesia: West Papua, Arfak Mountains

characteristic: geo loc name

text: full insect

text: J. Skevington

characteristic: identified by

characteristic: isolate

characteristic: isolation source

text: 1.097 S 133.918 E

text: Citrogramma circumdatum

characteristic: organism

text: male

characteristic: sex

characteristic: specimen voucher

characteristic: temp

text: full insect

characteristic: tissue

text: Anchored Enrichment Data from Diptera: Syrphidae: Citrogramma circumdatus


characteristic: External Id

text: fish

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: SRA accession

text: environmental/food/other

text: FDA

characteristic: collected by

characteristic: collection date

characteristic: fda lab id

text: Chile

text: fresh salmon

text: food (fresh):FOODON_00002457|salmon food product:FOODON_00002220

characteristic: ontological term

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: project name

text: United States Food and Drug Administration|Office of Regulatory Affairs|Pacific Southwest Food and Feed Laboratory

characteristic: sequenced by

text: food

characteristic: source type

characteristic: strain

characteristic: title


characteristic: External Id

text: fish

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: FDA

text: China

characteristic: geo loc name

text: frozen whole colossoma red pompano fish (Piaractus brachypomus)

characteristic: isolation source

text: fish (frozen):FOODON_03301083|pompano:FOODON_03411475|whole:FOODON_03430131

text: Salmonella enterica

characteristic: organism

text: GenomeTrakr

text: food

text: Piaractus brachypomus

characteristic: specific host


text: environmental

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: SRA accession

text: FDA

text: USA:OR

text: environmental swab

text: environmental (swab or sampling):GENEPIO_0001732

text: Listeria monocytogenes

text: GenomeTrakr

text: United States Food and Drug Administration|Office of Regulatory Affairs|Pacific Northwest Laboratory

text: environmental


text: clinical/research| human

text: FDA Center for Food Safety and Applied Nutrition

text: live

text: Pathogen.cl

text: USDA

characteristic: collected by

text: USA:IL

text: Homo sapiens

characteristic: host

text: NRRL B-33621

characteristic: ontological term

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

characteristic: serovar

text: human

characteristic: source type

text: Pathogen: clinical or host-associated sample from Listeria monocytogenes


characteristic: External Id

text: clinical/research| human

characteristic: IFSAC+ Category

text: live

text: Pathogen.cl

characteristic: NCBI submission package

text: USDA

text: USA:IL

characteristic: geo loc name

text: Homo sapiens

text: NRRL B-33645

text: Listeria monocytogenes

text: GenomeTrakr

text: human

characteristic: strain

characteristic: title


text: clinical/research| human

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

text: USDA

text: USA:IL

text: Homo sapiens

text: NRRL B-33657

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

text: human


text: clinical/research| human

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: SRA accession

text: USDA

characteristic: collected by

text: USA:IL

text: Homo sapiens

characteristic: host

text: NRRL B-33686

text: Listeria monocytogenes

text: GenomeTrakr

text: human


text: clinical/research| human

text: live

text: Pathogen.cl

characteristic: Outbreak

text: USDA

characteristic: collection date

text: USA:CA

text: Homo sapiens

text: NRRL B-33143

characteristic: ontological term

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

characteristic: serovar

text: human

characteristic: source type


characteristic: External Id

text: clinical/research| human

characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

text: Pathogen.cl

characteristic: NCBI submission package

text: USDA

text: Canada

characteristic: geo loc name

text: Homo sapiens

text: NRRL B-33141

text: stool

characteristic: isolation source

text: Listeria monocytogenes

text: GenomeTrakr

text: human

characteristic: strain

characteristic: title


text: clinical/research| human

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: SRA accession

text: USDA

characteristic: collected by

text: Canada

text: Homo sapiens

text: NRRL B-33056

text: vagina

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

text: human


text: other animal

text: live

text: Pathogen.env

text: USDA

characteristic: culture collection

text: USA

text: Ovine

characteristic: host

text: NRRL B-33116

text: sheep

characteristic: ontological term

text: Listeria monocytogenes ATCC 19117

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

characteristic: serovar

text: animal

characteristic: source type

text: ATCC 19117

text: Pathogen: environmental/food/other sample from Listeria monocytogenes ATCC 19117


characteristic: External Id

text: veterinary clinical/research| other animal

characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: USDA

text: Ovine

text: NRRL B-33078

text: ovine brain

characteristic: isolation source

text: brain:UBERON_0000955, sheep:FOODON_03411183

text: Listeria monocytogenes

text: GenomeTrakr

text: animal

characteristic: strain

text: Pathogen: environmental/food/other sample from Listeria monocytogenes


characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: USDA

text: Monkey

text: NRRL B-33015

text: monkey placenta

text: monkey:FOODON_03412439, placenta:UBERON_0001987

text: Listeria monocytogenes

text: GenomeTrakr

text: animal

characteristic: title


text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: USDA

characteristic: collected by

characteristic: collection date

text: NRRL B-33369

text: equine liver

text: equine:CURATION_0001431| liver:UBERON_0002107

characteristic: ontological term

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

text: animal

text: Equine

characteristic: specific host


characteristic: External Id

text: veterinary clinical/research| cow

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

text: USDA

text: USA:NY

characteristic: geo loc name

text: NRRL B-57602

text: feces bovine

text: bovine:FOODON_03414374, feces:UBERON_0001988

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

characteristic: serovar

text: animal

characteristic: source type


text: clinical/research| human

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: NCBI submission package

text: USDA

text: USA:MD

text: Homo sapiens

characteristic: host

text: NRRL B-57355

text: Listeria monocytogenes

text: GenomeTrakr

text: human

characteristic: strain


text: clinical/research| human

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: SRA accession

text: USDA

characteristic: collected by

characteristic: collection date

text: USA:CT

text: Homo sapiens

text: NRRL B-33563

text: blood

characteristic: isolation source

characteristic: ontological term

text: Listeria monocytogenes

characteristic: pfge primary enzyme pattern

text: GenomeTrakr

text: human

characteristic: title


characteristic: External Id

text: clinical/research| human

characteristic: IFSAC+ Category

text: live

text: Pathogen.cl

text: USDA

text: USA:CO

characteristic: geo loc name

text: Homo sapiens

text: NRRL B-33577

text: blood

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

characteristic: serovar

text: human

characteristic: source type


text: clinical/research

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: USDA

text: USA:OH

text: NRRL B-33593

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: strain


text: clinical/research

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: SRA accession

text: environmental/food/other

text: USDA

characteristic: collected by

characteristic: collection date

text: USA:OR

text: NRRL B-33595

characteristic: ontological term

text: Listeria monocytogenes

characteristic: pfge primary enzyme pattern

text: GenomeTrakr


characteristic: External Id

text: clinical/research| human

characteristic: IFSAC+ Category

text: live

text: Pathogen.cl

text: USDA

text: USA:CT

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: NRRL B-33597

text: blood

characteristic: isolation source

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

characteristic: project name

text: human

characteristic: title


text: cow

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

text: USDA

text: USA:NY

text: NRRL B-57610

text: bovine

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: sequenced by

characteristic: serovar

text: animal

characteristic: source type


text: clinical/research| human

text: live

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: USDA

characteristic: collected by

characteristic: collection date

text: USA:KS

text: Homo sapiens

text: NRRL B-57611

characteristic: ontological term

text: Listeria monocytogenes

text: GenomeTrakr

text: human

characteristic: strain


characteristic: External Id

text: clinical/research| human

characteristic: IFSAC+ Category

text: live

text: Pathogen.cl

text: USDA

text: Homo sapiens

characteristic: host

text: NRRL B-33222

text: tissue

characteristic: isolation source

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

characteristic: project name

text: human


text: clinical/research

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: USDA

text: NRRL B-33225

text: laboratory control strain

text: laboratory:NCIT_C37984| organism strain:NCIT_C14419

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: title


text: clinical/research

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: USDA

text: NRRL B-33226

text: laboratory control strain

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: sequenced by

characteristic: serovar


characteristic: External Id

text: clinical/research| human

text: live

text: Pathogen.cl

text: North Carolina (2000)

characteristic: Outbreak

text: USDA

characteristic: collected by

characteristic: collection date

text: USA:NC

characteristic: geo loc name

text: Homo sapiens

text: NRRL B-33422

characteristic: ontological term

text: Listeria monocytogenes

text: GenomeTrakr

text: human

characteristic: source type

characteristic: strain


text: clinical/research

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: USDA

text: NRRL B-57615

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

characteristic: project name


text: clinical/research| human

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: USDA

text: USA:NC

text: Homo sapiens

characteristic: host

text: NRRL B-57614

text: Listeria monocytogenes

text: GenomeTrakr

text: Indeterminate (4c)

text: human

characteristic: title


characteristic: External Id

text: clinical/research| human

text: live

text: Pathogen.cl

text: USDA

characteristic: collected by

characteristic: collection date

text: USA:NC

characteristic: geo loc name

text: Homo sapiens

text: NRRL B-57613

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: sequenced by

characteristic: serovar

text: human


text: clinical/research| human

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.cl

text: USDA

text: USA:NC

text: Homo sapiens

text: NRRL B-57612

characteristic: ontological term

text: Listeria monocytogenes

text: GenomeTrakr

text: human

characteristic: source type

characteristic: strain


text: clinical/research| human

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

text: Carlisle, 1981

characteristic: Outbreak

text: USDA

text: United Kingdom

text: Homo sapiens

text: NRRL B-33491

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

characteristic: project name

text: human


characteristic: External Id

text: clinical/research| human

text: live

text: Pathogen.cl

characteristic: NCBI submission package

characteristic: SRA accession

text: USDA

characteristic: collected by

text: United Kingdom

text: Homo sapiens

characteristic: host

text: NRRL B-33512

text: Listeria monocytogenes

text: GenomeTrakr

text: human

characteristic: title


text: multi-ingredient| beef

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: USDA

characteristic: collection date

text: USA:MO

characteristic: geo loc name

text: NRRL B-33287

text: cooked roast beef brisket

characteristic: isolation source

text: beef cooked:FOODON_03309738|roast beef:FOODON_00002734|brisket:FOODON_03530020

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: sequenced by

characteristic: serovar

text: food


text: turkey

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: USDA

text: USA:WI

text: NRRL B-33327

text: smoked turkey drumstick

text: drumstick:CURATION_0001378| turkey (smoked):FOODON_03311736

characteristic: ontological term

text: Listeria monocytogenes

text: GenomeTrakr

text: food

characteristic: source type

characteristic: strain


characteristic: External Id

text: root/underground (bulbs)

text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: USDA

characteristic: collected by

text: USA:AR

text: NRRL B-33902

text: garlic hot link

text: garlic (whole, raw):FOODON_03305208

text: Listeria monocytogenes

characteristic: organism

characteristic: pfge primary enzyme pattern

text: GenomeTrakr

characteristic: project name

text: food


text: multi-ingredient| meat

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: USDA

characteristic: collection date

text: USA:NC

characteristic: geo loc name

text: NRRL B-33358

text: cooked sweet italian sausage

characteristic: isolation source

text: sausage (cooked):FOODON_00001224|italian sausage:FOODON_03317294

text: Listeria monocytogenes

text: GenomeTrakr

text: food

characteristic: title


text: multi-ingredient| pork

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: USDA

text: USA:PR

text: NRRL B-33742

text: cooked ham sliced

text: ham (sliced|cooked):FOODON_03311694

characteristic: ontological term

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: sequenced by

characteristic: serovar

text: food


characteristic: External Id

text: beef| seeded vegetables (other)

text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: USDA

characteristic: collected by

text: USA:NY

text: NRRL B-33329

text: corn beef brisket

text: corn vegetable food product:FOODON_00001765| beef food product:FOODON_00001041| brisket:FOODON_03530020

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

text: food

characteristic: source type

characteristic: strain


text: multi-ingredient| beef| chicken

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: USDA

characteristic: collection date

text: USA:IL

characteristic: geo loc name

text: NRRL B-33308

text: seasoned chicken beef

text: food seasoned:FOODON_00002733| chicken:FOODON_03411457| beef food product:FOODON_00001041

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: project name

text: food


text: pork

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: environmental/food/other

characteristic: NCBI Sample Category

text: Pathogen.env

characteristic: NCBI submission model

text: USDA

text: USA:TX

text: NRRL B-57113

text: uncured canadian bacon

characteristic: isolation source

text: canadian bacon:FOODON_00003149; CURATION

text: Listeria monocytogenes

characteristic: pfge primary enzyme pattern

text: GenomeTrakr

text: food

characteristic: title


characteristic: External Id

text: environmental-factory/production facility

text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: SRA accession

text: USDA

characteristic: collected by

text: USA:NJ

text: NRRL B-33458

text: environmental swab sponge

text: environmental (swab or sampling):GENEPIO_0001732| environmental sponge:CURATION_0000359

characteristic: ontological term

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

characteristic: sequenced by

characteristic: serovar

text: environmental


text: multi-ingredient

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: USDA

text: USA:MD

characteristic: geo loc name

text: NRRL B-57121

text: chix salad wrap

text: salad:FOODON_03316042|flatbread wrap:FOODON_00002941

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: project name

text: food

characteristic: source type

characteristic: strain


text: multi-ingredient| pork

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: USDA

characteristic: collection date

text: USA:TN

text: NRRL B-33312

text: cooked ham

characteristic: isolation source

text: ham (cooked):FOODON_03312046

text: Listeria monocytogenes

text: GenomeTrakr

text: food


characteristic: External Id

text: multi-ingredient\,seeded vegetables (legumes)| beef

text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: USDA

characteristic: collected by

text: USA:OK

text: NRRL B-33853

text: barbeque bean beef

text: food (barbequed):FOODON_03301942| bean (whole):FOODON_00002753| beef food product:FOODON_00001041

characteristic: ontological term

text: Listeria monocytogenes

characteristic: pfge primary enzyme pattern

text: GenomeTrakr

text: food

characteristic: title


text: multi-ingredient| chicken

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: USDA

text: USA:VA

characteristic: geo loc name

text: NRRL B-57112

text: chicken frank

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

characteristic: sequenced by

characteristic: serovar

text: food

text: Pathogen: environmental/food/other sample from Listeria monocytogenes


text: multi-ingredient| beef| pork

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: USDA

text: USA:NJ

text: NRRL B-33237

text: beef pork frankfurter

text: beef frankfurter:FOODON_03310577| pork meat food product:FOODON_00001038

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: project name

text: food

characteristic: source type

characteristic: strain


characteristic: External Id

text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: SRA accession

text: USDA

characteristic: collected by

text: USA:PA

text: NRRL B-33846

text: environmental swab sponge non food contact surface

characteristic: isolation source

text: environmental (swab or sampling):GENEPIO_0001732| environmental sponge:CURATION_0000359| swab - food contact surface (deprecated):GENEPIO_0001720

characteristic: ontological term

text: Listeria monocytogenes

text: GenomeTrakr

text: environmental


text: pork

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: USDA

text: USA:NC

characteristic: geo loc name

text: NRRL B-33786

text: boneless country ham

text: ham (boneless):FOODON_03312069|country ham:FOODON_03309929

text: Listeria monocytogenes

characteristic: pfge primary enzyme pattern

text: GenomeTrakr

text: food

characteristic: title


text: multi-ingredient| pork

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: USDA

text: Spain

text: NRRL B-57090

text: chorizo pork sausage

text: pork sausage:FOODON_00002729|chorizo:FOODON_03316070

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

characteristic: sequenced by

characteristic: serovar

text: food


characteristic: External Id

text: pork

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: Outbreak

text: environmental/food/other

text: USDA

text: USA:GA

text: NRRL B-33763

text: baked ham

text: food (baked):FOODON_00002456|ham food product:FOODON_00002502

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: project name

text: food

characteristic: source type

characteristic: strain


text: multi-ingredient| meat

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: USDA

characteristic: collected by

characteristic: collection date

text: USA:WA

text: NRRL B-33252

text: sausage

characteristic: isolation source

text: sausage (formed):FOODON_03315904

characteristic: ontological term

text: Listeria monocytogenes

text: GenomeTrakr

text: food


text: multi-ingredient| poultry

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: USDA

text: USA:NC

characteristic: geo loc name

text: NRRL B-33452

text: chicken burrito

text: chicken:FOODON_03411457|burrito:FOODON_00002510

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

characteristic: sequenced by

text: food

characteristic: title


characteristic: External Id

text: multi-ingredient| pork

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: USDA

text: USA:PR

text: NRRL B-33706

text: sliced cooked ham manual

text: ham (sliced|cooked):FOODON_03311694

text: Listeria monocytogenes

characteristic: pfge primary enzyme pattern

text: GenomeTrakr

characteristic: project name

characteristic: serovar

text: food

characteristic: source type


text: multi-ingredient| meat

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

characteristic: Outbreak

characteristic: SRA accession

text: environmental/food/other

text: USDA

characteristic: collected by

text: USA:TN

text: NRRL B-33703

text: fully cooked sausage patty

text: fully heat-treated:FOODON_03440014|patty:FOODON_00002951|sausage (cooked):FOODON_00001224

text: Listeria monocytogenes

text: GenomeTrakr

text: food

characteristic: strain


text: multi-ingredient| pork

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: USDA

text: USA:PA

characteristic: geo loc name

text: NRRL B-33782

text: ham salad

characteristic: isolation source

text: ham salad:FOODON_03306091

characteristic: ontological term

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

text: food


characteristic: External Id

text: multi-ingredient| pork

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: USDA

text: USA:AR

text: NRRL B-33946

text: barbeque seasoned fresh cooked ham

text: ham (cooked):FOODON_03312046|food (barbequed):FOODON_03301942|food (seasoned):FOODON_00002733|food (fresh):FOODON_00002457

text: Listeria monocytogenes

characteristic: pfge primary enzyme pattern

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: food

characteristic: title


text: multi-ingredient| meat

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: USDA

characteristic: collection date

text: USA:CA

text: NRRL B-33260

text: beef sausage link

text: beef sausage:FOODON_00002958

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: serovar

text: food

characteristic: source type


text: multi-ingredient| meat

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: USDA

characteristic: collected by

text: USA:MI

characteristic: geo loc name

text: NRRL B-33281

text: dried sausage

characteristic: isolation source

text: sausage (dried):FOODON_03315801

text: Listeria monocytogenes

text: GenomeTrakr

text: food

characteristic: strain


characteristic: External Id

text: multi-ingredient

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: USDA

text: USA:PA

text: NRRL B-33985

text: sorapple

text: Listeria monocytogenes

characteristic: organism

characteristic: pfge primary enzyme pattern

text: GenomeTrakr

characteristic: project name

text: food


text: multi-ingredient| beef

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: USDA

text: USA:FL

text: NRRL B-33290

text: quesadilla with beef

text: quesadilla:FOODON_00002538|beef food product:FOODON_00001041

characteristic: ontological term

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: sequenced by

text: food

characteristic: title


text: pork

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

text: USDA

characteristic: collected by

text: USA:IN

text: NRRL B-33777

text: smoked pork loin

text: pork (smoked):FOODON_03306416| pork loin:FOODON_00002570

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: serovar

text: food

characteristic: source type


characteristic: External Id

text: beef

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: USDA

characteristic: collection date

text: USA:IL

characteristic: geo loc name

text: NRRL B-33316

text: roast beef

characteristic: isolation source

text: roast beef:FOODON_00002734

text: Listeria monocytogenes

text: GenomeTrakr

text: food

characteristic: strain


text: game

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: USDA

text: USA:NH

text: NRRL B-33321

text: roast duckling

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

characteristic: project name

text: food


text: multi-ingredient| pork

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

text: USDA

text: USA:CA

text: NRRL B-33324

text: pork spring roll

text: pork meat food product:FOODON_00001038| spring roll:CURATION_0001432

characteristic: ontological term

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: sequenced by

text: food

characteristic: title


characteristic: External Id

text: multi-ingredient| herbs| pork

text: FDA Center for Food Safety and Applied Nutrition

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: USDA

characteristic: collected by

text: USA:NJ

text: NRRL B-33326

text: hungarian paprika salami

text: hungarian wax pepper plant:FOODON_03411353| salami:FOODON_03312067

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: serovar

text: food

characteristic: source type


text: multi-ingredient| beef| pork

characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

text: Pathogen.env

text: environmental/food/other

text: USDA

characteristic: collection date

text: USA:NH

characteristic: geo loc name

text: NRRL B-33348

text: sweet bologna

characteristic: isolation source

text: Listeria monocytogenes

text: GenomeTrakr

text: food

characteristic: strain


text: pork

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: USDA

text: USA:PA

text: NRRL B-33349

text: smoked pork chop

text: pork (smoked):foodon_03306416| pork chop food product:foodon_00001049

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

characteristic: project name

text: food


characteristic: External Id

text: multi-ingredient| meat

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: USDA

text: USA:KY

text: NRRL B-57045

text: wiener sausage

text: frankfurter:foodon_03302012| sausage (formed):foodon_03315904

characteristic: ontological term

text: Listeria monocytogenes

characteristic: pfge primary enzyme pattern

text: GenomeTrakr

characteristic: sequenced by

text: food

characteristic: title


text: seeded vegetables (solanaceous)

characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: USDA

characteristic: collected by

characteristic: collection date

text: USA:CT

text: NRRL B-33447

text: pepper

text: pepper (raw):FOODON_03309928

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: serovar

text: food

characteristic: source type

text: Pathogen: environmental/food/other sample from Listeria monocytogenes


text: environmental

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: USDA

text: USA:NJ

characteristic: geo loc name

text: NRRL B-33460

text: environment

characteristic: isolation source

text: environmental system:envo_01000254

text: Listeria monocytogenes

text: GenomeTrakr

text: environmental

characteristic: strain


characteristic: External Id

text: chicken

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: USDA

text: USA:CA

text: NRRL B-33857

text: grilled chicken breast

text: chicken breast:FOODON_00002703|food broiled or grilled:FOODON_00002647

characteristic: ontological term

text: Listeria monocytogenes

characteristic: organism

characteristic: pfge primary enzyme pattern

text: GenomeTrakr

characteristic: project name

text: food


text: multi-ingredient| beef| pork

characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: USDA

characteristic: collected by

characteristic: collection date

text: USA:HI

text: NRRL B-33235

text: beef pork frankfurter

text: beef frankfurter:FOODON_03310577| pork meat food product:FOODON_00001038

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: sequenced by

text: food

characteristic: title


text: chicken| eggs

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: USDA

text: USA:TX

characteristic: geo loc name

text: NRRL B-33759

text: chicken mini egg roll

text: hen egg whole:FOODON_03316061| chicken roll:FOODON_03310589

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: serovar

text: food

characteristic: source type


characteristic: External Id

text: multi-ingredient| chicken| herbs

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: USDA

text: USA:CA

text: NRRL B-33790

text: herb chicken wrap

characteristic: isolation source

text: herb:FOODON_00003042| chicken:FOODON_03411457| flatbread wrap:FOODON_00002941

characteristic: ontological term

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

text: food

characteristic: strain


text: beef

characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: USDA

characteristic: collected by

text: USA:MN

text: NRRL B-33836

text: beef weiner

text: beef food product:FOODON_00001041|sausage (formed):FOODON_03315904

text: Listeria monocytogenes

characteristic: pfge primary enzyme pattern

text: GenomeTrakr

characteristic: project name

text: food


text: multi-ingredient| beef

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: USDA

text: USA:PA

text: NRRL B-57065

text: cooked cured beef loaf

text: beef cured|cooked:FOODON_03311654

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: sequenced by

text: food

characteristic: title


characteristic: External Id

text: multi-ingredient| poultry

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: USDA

text: USA:OH

characteristic: geo loc name

text: NRRL B-33877

text: fries chicken nuggets

text: chicken nugget:foodon_00002672

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: serovar

text: food

characteristic: source type


text: chicken

characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

text: Pathogen.env

text: USDA

text: USA:LA

text: NRRL B-57032

text: king creole chicken andouille

characteristic: isolation source

characteristic: ontological term

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

text: food

characteristic: strain


text: beef

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: USDA

characteristic: collected by

text: USA:CO

text: NRRL B-57044

text: roasted beef

text: beef (roasted):foodon_03311662

text: Listeria monocytogenes

characteristic: pfge primary enzyme pattern

text: GenomeTrakr

characteristic: project name

text: food


characteristic: External Id

text: multi-ingredient| pork

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: USDA-FSIS

characteristic: collection date

text: USA:CA

text: ready to eat black forest ham

text: food (ready-to-serve):FOODON_03316636|ham food product:FOODON_00002502

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: sequenced by

text: food

characteristic: title


text: multi-ingredient

characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: USDA-FSIS

text: USA:NJ

characteristic: geo loc name

text: ready to eat product fully cooked not sliced

characteristic: isolation source

text: fully heat-treated:FOODON_03440014|sliced:FOODON_03430137

text: Listeria monocytogenes

text: GenomeTrakr

text: food

characteristic: source type


text: multi-ingredient| poultry

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: USDA-FSIS

text: USA:GA

text: ready to eat fully cooked chicken breast

text: chicken breast (cooked):FOODON_03311140|fully heat-treated:FOODON_03440014

characteristic: ontological term

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

text: food

characteristic: strain


characteristic: External Id

text: environmental-factory/production facility

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

text: USDA-FSIS

characteristic: collected by

text: USA:WI

text: environmental swab sponge non food contact surface

text: environmental (swab or sampling):GENEPIO_0001732| environmental sponge:CURATION_0000359| swab - food contact surface (deprecated):GENEPIO_0001720

text: Listeria monocytogenes

characteristic: pfge primary enzyme pattern

text: GenomeTrakr

characteristic: project name

text: environmental


text: turkey

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC center name

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: USDA-FSIS

characteristic: collection date

text: USA:MN

text: ready to eat fully cooked sliced turkey

text: food (ready-to-serve):FOODON_03316636|domestic turkey:FOODON_03414166|fully heat-treated:FOODON_03440014|sliced:FOODON_03430137

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: sequenced by

text: food

characteristic: title


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: USDA-FSIS

text: USA:IL

characteristic: geo loc name

text: environmental swab sponge food contact surface

characteristic: isolation source

text: Listeria monocytogenes

text: GenomeTrakr

text: environmental

characteristic: source type


characteristic: External Id

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: USDA-FSIS

text: USA:WA

characteristic: ontological term

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

text: environmental

characteristic: strain

text: Pathogen: environmental/food/other sample from Listeria monocytogenes


characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Pathogen.env

text: USDA-FSIS

characteristic: collected by

text: USA:OH

text: Listeria monocytogenes

characteristic: pfge primary enzyme pattern

text: GenomeTrakr

characteristic: project name

text: environmental


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: SRA accession

text: USDA-FSIS

characteristic: collection date

text: USA:IL

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: sequenced by

text: environmental

characteristic: title


characteristic: External Id

text: multi-ingredient| beef

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: USDA-FSIS

text: USA:TX

characteristic: geo loc name

text: ready to eat fully cooked sausage beef link

characteristic: isolation source

text: food (ready-to-serve):FOODON_03316636|fully heat-treated:FOODON_03440014|sausage cooked:FOODON_00001224|beef cooked:FOODON_03309738

text: Listeria monocytogenes

text: GenomeTrakr

text: food

characteristic: source type


text: multi-ingredient| pork

characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: USDA-FSIS

text: USA:CA

text: ready to eat smoked bratwurst

text: bratwurst:FOODON_00002911|food (ready-to-serve):FOODON_03316636|food (smoked):FOODON_03310311

characteristic: ontological term

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

text: food

characteristic: strain


text: multi-ingredient| beef| pork

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: USDA-FSIS

characteristic: collected by

text: USA:PA

text: ready to eat knockwurst

text: food (ready-to-serve):FOODON_03316636| knockwurst:FOODON_03317269

text: Listeria monocytogenes

characteristic: pfge primary enzyme pattern

text: GenomeTrakr

characteristic: project name

text: food


characteristic: External Id

text: dbGaP

text: live

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: GRU

text: SNP Genotypes (Array)

characteristic: molecular data type

text: Homo sapiens

text: male

characteristic: sex

text: Mendelian

characteristic: study design

text: Familial Idiopathic Pulmonary Fibrosis

characteristic: study disease

characteristic: study name

text: Yes

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: DNA sample from a human male participant in the dbGaP study Yale Center for Mendelian Genomics (YCMG)

characteristic: title


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

text: GRU

text: SNP Genotypes (Array)

text: Homo sapiens

characteristic: organism

text: male

text: Mendelian

text: Familial Idiopathic Pulmonary Fibrosis

text: Yale Center for Mendelian Genomics (YCMG)

text: Yes


characteristic: External Id

text: dbGaP

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: GRU

text: SNP Genotypes (NGS)

characteristic: molecular data type

text: Homo sapiens

text: male

text: Mendelian

text: Familial Idiopathic Pulmonary Fibrosis

text: Yes


text: dbGaP

text: live

text: Generic

text: DNA

text: GRU

text: SNP Genotypes (NGS)

text: Homo sapiens

text: male

characteristic: sex

text: Mendelian

characteristic: study design

characteristic: study name

text: No

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: DNA

text: GRU

text: SNP Genotypes (NGS)

text: Homo sapiens

text: female

text: Mendelian

text: No

characteristic: submitter handle

text: DNA sample from a human female participant in the dbGaP study Yale Center for Mendelian Genomics (YCMG)

characteristic: title


characteristic: External Id

text: multi-ingredient, meat

characteristic: IFSAC Category

text: University of California at Davis

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Dwayne Roberson/FDA

characteristic: biomaterial provider

text: deli meat

characteristic: isolation source

text: luncheon meat:FOODON_03310675

characteristic: ontological term

text: Listeria monocytogenes

characteristic: organism

text: whole organism

characteristic: sample type

text: food

characteristic: source type

characteristic: strain


text: clinical/research, human

characteristic: IFSAC+ Category

text: University of California at Davis

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.cl

text: clinical/host-associated

text: Dwayne Roberson/FDA

text: Homo sapiens

characteristic: host

text: Listeria monocytogenes

text: whole organism

text: human

text: Pathogen: clinical or host-associated sample from Listeria monocytogenes


characteristic: External Id

text: cow

text: University of California at Davis

text: live

characteristic: INSDC status

text: Pathogen.env

text: Dwayne Roberson/FDA

text: bovine (Bos taurus)

text: bos taurus:NCBITAXON_9913, bovine:FOODON_03414374

text: Listeria monocytogenes

text: whole organism

text: animal

characteristic: title


text: environmental

text: University of California at Davis

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Dwayne Roberson/FDA

text: environment

text: environmental system:ENVO_01000254

text: Listeria monocytogenes

text: whole organism

text: environmental


text: multi-ingredient

characteristic: IFSAC Category

text: University of California at Davis

text: live

text: Pathogen.env

characteristic: SRA accession

text: Dwayne Roberson/FDA

characteristic: biomaterial provider

text: food

characteristic: isolation source

text: Listeria monocytogenes

text: whole organism

text: food


text: multi-ingredient, meat

text: University of California at Davis

text: live

text: Pathogen.env

text: Dwayne Roberson/FDA

text: hot dog

text: hot dog:FOODON_00001009

characteristic: ontological term

text: Listeria monocytogenes

characteristic: organism

text: whole organism

characteristic: sample type

text: food

characteristic: source type


text: fish

text: University of California at Davis

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: Dwayne Roberson/FDA

text: salmon

text: salmon food product:FOODON_00002220

text: Listeria monocytogenes

text: whole organism

text: food

characteristic: strain


characteristic: External Id

text: mollusks (bi-valve)

characteristic: IFSAC+ Category

text: University of California at Davis

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: Jessica Jones/FDA

text: FDA

characteristic: collected-by

characteristic: collection date

text: USA: TX

characteristic: geo loc name

text: CFSAN011096; FDA_R5

text: oyster

text: Vibrio parahaemolyticus

text: whole organism

characteristic: serovar

text: food

text: Pathogen: environmental/food/other sample from Vibrio parahaemolyticus


text: mollusks (bi-valve)

text: University of California at Davis

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: Jessica Jones/FDA

text: FDA

text: USA: FL

text: CFSAN011100; FDA_R10

text: oyster

text: Vibrio parahaemolyticus

text: whole organism

text: food

characteristic: title


text: mollusks (bi-valve)

text: University of California at Davis

text: live

text: Pathogen.env

text: environmental/food/other

text: Jessica Jones/FDA

characteristic: biomaterial provider

text: FDA

text: USA: WA

text: CFSAN011112; FDA_R42

text: oyster

characteristic: isolation source

characteristic: ontological term

text: Vibrio parahaemolyticus

characteristic: organism

text: whole organism

characteristic: sample type

text: food

characteristic: source type


characteristic: External Id

text: mollusks (bi-valve)

characteristic: IFSAC+ Category

text: University of California at Davis

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: Jessica Jones/FDA

text: FDA

text: USA: AL

text: CFSAN011115; FDA_R51

text: oyster

text: Vibrio parahaemolyticus

text: whole organism

text: food

characteristic: strain


text: mollusks (bi-valve)

text: University of California at Davis

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: Jessica Jones/FDA

text: FDA

characteristic: collected-by

characteristic: collection date

text: USA: ME

characteristic: geo loc name

text: CFSAN011122; FDA_R59

text: oyster

text: Vibrio parahaemolyticus

text: whole organism

characteristic: serovar

text: food


text: mollusks (bi-valve)

text: University of California at Davis

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: Jessica Jones/FDA

characteristic: biomaterial provider

text: FDA

text: Canada: PEI

text: CFSAN011138; FDA_R96

text: oyster

characteristic: isolation source

text: Vibrio parahaemolyticus

text: whole organism

text: food

characteristic: title


characteristic: External Id

text: mollusks (bi-valve)

characteristic: IFSAC+ Category

text: University of California at Davis

text: live

text: Pathogen.env

text: environmental/food/other

text: Jessica Jones/FDA

text: FDA

text: Canada: PEI

text: CFSAN011140; FDA_R98

text: oyster

characteristic: ontological term

text: Vibrio parahaemolyticus

characteristic: organism

text: whole organism

characteristic: sample type

text: food

characteristic: source type


text: mollusks (bi-valve)

text: University of California at Davis

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: Jessica Jones/FDA

text: FDA

text: Canada: PEI

text: CFSAN011143; FDA_R108

text: oyster

text: Vibrio parahaemolyticus

text: whole organism

text: food

characteristic: strain


text: mollusks (bi-valve)

text: University of California at Davis

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: Jessica Jones/FDA

text: FDA

characteristic: collected-by

characteristic: collection date

text: Canada: PEI

characteristic: geo loc name

text: CFSAN011145; FDA_R110

text: oyster

text: Vibrio parahaemolyticus

text: whole organism

characteristic: serovar

text: food


characteristic: External Id

text: mollusks (bi-valve)

characteristic: IFSAC+ Category

text: University of California at Davis

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: Jessica Jones/FDA

characteristic: biomaterial provider

text: FDA

text: USA: FL

text: CFSAN011157; FDA_R144

text: oyster

characteristic: isolation source

text: Vibrio parahaemolyticus

text: whole organism

text: food

characteristic: title


text: mollusks (bi-valve)

text: University of California at Davis

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: Jessica Jones/FDA

text: FDA

text: USA: FL

text: CFSAN011159; FDA_R146

text: oyster

characteristic: ontological term

text: Vibrio parahaemolyticus

characteristic: organism

text: whole organism

characteristic: sample type

text: food

characteristic: source type


text: chicken

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:OH

text: chicken

text: Salmonella enterica

text: food

characteristic: strain

text: Pathogen: environmental/food/other sample from Salmonella enterica


characteristic: External Id

text: chicken

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

characteristic: collection date

text: USA:AZ

characteristic: geo loc name

text: chicken

text: Salmonella enterica

text: food


text: chicken

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:CA

text: chicken

characteristic: isolation source

text: Salmonella enterica

text: food

characteristic: title


text: chicken

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:AR

text: chicken

characteristic: ontological term

text: Salmonella enterica

text: food


text: chicken

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:MS

text: chicken

text: Salmonella enterica

characteristic: organism

text: food

characteristic: source type


text: chicken

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:CO

text: chicken

text: Salmonella enterica

text: food


text: chicken

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:IL

text: chicken

text: Salmonella enterica

text: food


text: chicken

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:OR

text: chicken

text: Salmonella enterica

text: food

characteristic: strain


characteristic: External Id

text: chicken

characteristic: IFSAC Category

text: live

text: Pathogen.env

text: FDA Contracted Laboratory

text: USA:CA

text: chicken

text: Salmonella enterica

text: food


text: chicken

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

characteristic: collection date

text: USA:KY

characteristic: geo loc name

text: chicken

text: Salmonella enterica

text: food


text: chicken

text: live

text: Pathogen.env

characteristic: SRA accession

text: FDA Contracted Laboratory

text: USA:AZ

text: chicken

characteristic: isolation source

text: Salmonella enterica

text: food

characteristic: title


text: chicken

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:NE

text: chicken

characteristic: ontological term

text: Salmonella enterica

text: food


text: chicken

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:MN

text: chicken

text: Salmonella enterica

characteristic: organism

text: food

characteristic: source type


text: chicken

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: FDA Contracted Laboratory

text: USA:TX

text: chicken

text: Salmonella enterica

text: food


characteristic: External Id

text: chicken

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: FDA Contracted Laboratory

text: USA:CA

text: chicken

text: Salmonella enterica

text: food

characteristic: strain


text: chicken

characteristic: IFSAC Category

text: live

text: Pathogen.env

text: FDA Contracted Laboratory

characteristic: collection date

text: USA:NE

text: chicken

text: Salmonella enterica

text: food


text: chicken

text: live

text: Pathogen.env

text: FDA Contracted Laboratory

text: USA:AR

characteristic: geo loc name

text: chicken

text: Salmonella enterica

text: food


text: chicken

text: live

text: Pathogen.env

text: FDA Contracted Laboratory

text: USA:KY

text: chicken

characteristic: isolation source

text: Salmonella enterica

text: food


text: turkey

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:MN

text: turkey

text: domestic turkey:FOODON_03414166

text: Salmonella enterica

text: food

characteristic: title


text: turkey

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: FDA Contracted Laboratory

text: USA:MN

text: turkey

text: domestic turkey:FOODON_03414166

characteristic: ontological term

text: Salmonella enterica

text: food


text: chicken

characteristic: INSDC last update

text: live

text: Pathogen.env

text: FDA Contracted Laboratory

text: USA:AR

text: chicken

text: Salmonella enterica

characteristic: organism

text: food

characteristic: source type


text: chicken

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:AR

text: chicken

text: Salmonella enterica

text: food


characteristic: External Id

text: chicken

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:CA

text: chicken

text: Salmonella enterica

text: food

characteristic: strain


text: chicken

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

characteristic: collection date

text: USA:OH

characteristic: geo loc name

text: chicken

text: Salmonella enterica

text: food


text: chicken

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:MS

text: chicken

characteristic: isolation source

text: Salmonella enterica

text: food


text: chicken

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:CO

text: chicken

text: Salmonella enterica

text: food

characteristic: title


text: chicken

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:TX

text: chicken

text: Salmonella enterica

text: food


text: chicken

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:MD

text: chicken

characteristic: ontological term

text: Salmonella enterica

text: food


text: chicken

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:AZ

text: chicken

text: Salmonella enterica

characteristic: organism

text: food

characteristic: source type


text: chicken

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:MN

text: chicken

text: Salmonella enterica

text: food


characteristic: External Id

text: Vanderbilt University

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: France:Paris

text: Homo sapiens

characteristic: host

text: Aspergillus fumigatus

text: Cell culture

characteristic: sample type

text: Aspergillus fumigatus wild-type


text: Vanderbilt University

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: collection date

text: USA:Illinois

characteristic: geo loc name

text: Homo sapiens

text: Aspergillus fumigatus

text: Cell culture

characteristic: strain

text: Aspergillus fumigatus mtfA deletion


text: Vanderbilt University

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: USA:Illinois

text: Homo sapiens

text: Aspergillus fumigatus

text: Cell culture

text: Aspergillus fumigatus veA deletion

characteristic: title


Csak NM1240

text: clinical/research| human

characteristic: IFSAC+ Category

text: USFDA

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: clinical/host-associated

text: CDC

characteristic: collected by

text: USA:NM

text: Homo sapiens

text: cerebrospinal fluid from a fatal case of infantile meningitis

characteristic: isolation source

text: cerebrospinal fluid:uberon_0001359| meningitis:ncit_c26828

text: Cronobacter sakazakii

characteristic: serogroup

text: human

text: Pathogen: environmental/food/other sample from Cronobacter sakazakii


text: fish

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

text: FDA

characteristic: fda lab id

text: USA:CA

text: salmon fillet

text: fillet:CURATION_0001377| salmon food product:FOODON_00002220

characteristic: ontological term

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

characteristic: project name

text: United States Food and Drug Administration|Office of Regulatory Affairs|Pacific Southwest Food and Feed Laboratory

characteristic: sequenced by

text: food

characteristic: source type


characteristic: External Id

text: Environmental | Aquatic | Deep subsurface | Groundwater | Porewater

characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

text: live

text: MIMS.me

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: collection date

characteristic: depth

text: Opalinus Clay porewater sample

characteristic: description

text: Deep subsurface

characteristic: env biome

text: Opalinus Clay porewater

characteristic: env feature

text: Clay

text: Switzerland: Mt. Terri

characteristic: geo loc name

text: 47.3790 N 7.1648 E

characteristic: lat lon

text: subsurface metagenome

text: MIMS Environmental/Metagenome sample of Deep subsurface microbial communities from Mt. Terri, Switzerland - Autotrophic microbial communities BRH/37_all


name: Deep subsurface microbial communities from Mt. Terri, Switzerland - Autotrophic microbial communities BRH/23

text: DOE Joint Genome Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIMS.me

text: 562.73 m

text: Opalinus Clay porewater sample

text: Deep subsurface

text: Opalinus Clay porewater

text: Clay

text: Switzerland: Mt. Terri

text: 47.3790 N 7.1648 E

text: subsurface metagenome

text: MIMS Environmental/Metagenome sample from subsurface metagenome

characteristic: title


name: Deep subsurface microbial communities from Mt. Terri, Switzerland - Autotrophic microbial communities BRH/21

characteristic: External Id

characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

text: live

text: MIMS.me

text: Opalinus Clay porewater sample

text: Deep subsurface

text: Opalinus Clay porewater

text: Clay

text: Switzerland: Mt. Terri

text: 47.3790 N 7.1648 E

text: subsurface metagenome

characteristic: organism


name: Deep subsurface microbial communities from Mt. Terri, Switzerland - Autotrophic microbial communities BRH/17

text: DOE Joint Genome Institute

text: live

text: MIMS.me

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: 562.73 m

text: Opalinus Clay porewater sample

text: Deep subsurface

text: Opalinus Clay porewater

text: Clay

text: Switzerland: Mt. Terri

text: 47.3790 N 7.1648 E

text: subsurface metagenome


name: Deep subsurface microbial communities from Mt. Terri, Switzerland - Autotrophic microbial communities BRH/9

text: DOE Joint Genome Institute

text: live

text: MIMS.me

characteristic: collection date

characteristic: depth

text: Opalinus Clay porewater sample

characteristic: description

text: Deep subsurface

text: Opalinus Clay porewater

text: Clay

text: Switzerland: Mt. Terri

text: 47.3790 N 7.1648 E

text: subsurface metagenome


name: Deep subsurface microbial communities from Mt. Terri, Switzerland - Autotrophic microbial communities BRH/5

text: DOE Joint Genome Institute

text: live

text: MIMS.me

text: Opalinus Clay porewater sample

text: Deep subsurface

characteristic: env biome

text: Opalinus Clay porewater

characteristic: env feature

text: Clay

text: Switzerland: Mt. Terri

characteristic: geo loc name

text: 47.3790 N 7.1648 E

text: subsurface metagenome


text: crustaceans

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA

characteristic: collected by

characteristic: fda lab id

text: Philippines

text: frozen fresh shrimp

characteristic: isolation source

text: shrimp (frozen):FOODON_03301169|food fresh:FOODON_00002457

characteristic: ontological term

text: Salmonella enterica

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: food

characteristic: source type

characteristic: strain


characteristic: External Id

text: mollusks (non-bi-valve)

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: FDA

characteristic: collection date

text: Indonesia

text: frozen wild caught whole cleaned octopus

text: Salmonella enterica

characteristic: organism

text: GenomeTrakr

text: food

characteristic: title


text: fish

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA

characteristic: collected by

characteristic: fda lab id

text: Taiwan

characteristic: geo loc name

text: frozen whole farmed red drum fish

text: fish (frozen):FOODON_03301083|red drum:FOODON_03412460|whole:FOODON_03430131

text: Salmonella enterica

text: GenomeTrakr

text: food


text: University of Texas, Department of Integrative Biology

text: live

text: Generic

characteristic: common name

text: Sinsheimervirus phiX174

text: USA

characteristic: country

text: gut

characteristic: isolation-source

text: Apis mellifera

characteristic: nat-host

text: Enterobacteriaceae bacterium bta3-1

characteristic: strain

text: Sample from Enterobacteriaceae bacterium bta3-1


characteristic: External Id

text: University of Missouri - Columbia, Dept. of Veterinary Pathobiology

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: culture-collection

text: Mesomycoplasma dispar

text: ATCC 27140

text: Sample from Mesomycoplasma dispar

text: type strain of Mycoplasma dispar

characteristic: type material


text: Shandong University

text: live

text: MIGS.ba

characteristic: NCBI submission package

characteristic: collection date

characteristic: culture collection

text: Genetics of Pseudoalteromonas paragorgicola

characteristic: description

text: water

characteristic: env biome

text: seawater

characteristic: env feature

text: gorgonian

text: Pacific Ocean

text: 49.37 N 154.15 E

characteristic: lat lon

text: Pseudoalteromonas distincta KMM 3548

characteristic: organism

text: KMM 3548

text: Pseudoalteromonas paragorgicola str. DSM 26439 genome sequencing

characteristic: title

text: type strain of Pseudoalteromonas paragorgicola


text: Broad Institute of MIT and Harvard

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: AQHV

characteristic: common name

text: DSM 19448

text: Sample from Parabacteroides goldsteinii DSM 19448 = WAL 12034

text: type strain of Bacteroides goldsteinii

characteristic: type-material


characteristic: External Id

text: University of British Columbia

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: SRA accession

text: Canada: Matane, QC

characteristic: geo loc name

text: Populus balsamifera

characteristic: host

text: Sphaerulina populicola

text: Fungal culture

characteristic: sample type

characteristic: strain

text: Funal culture from Mycosphaerella populicola


text: multi-ingredient| meat

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: Wisconsin State Laboratory of Hygiene

characteristic: collected by

characteristic: collection date

text: USA:WI

text: brown serve breakfast sausage

characteristic: isolation source

text: breakfast sausage:FOODON_03317292|brown:PATO_0000952

characteristic: ontological term

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: food

characteristic: source type

text: Pathogen: environmental/food/other sample from Listeria monocytogenes


characteristic: External Id

text: environmental-factory/production facility

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

text: SC

text: USA:SC

text: environmental swab sponge distribution center

text: environmental (swab or sampling):GENEPIO_0001732| environmental sponge:CURATION_0000359| spatial pattern:PATO_0000060

text: Listeria monocytogenes

characteristic: organism

characteristic: pfge primary enzyme pattern

text: GenomeTrakr

text: environmental

characteristic: title


text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: SRA accession

text: SC

text: USA:SC

characteristic: geo loc name

text: distribution center

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: strain


text: veterinary clinical/research| other animal

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: State of Alaska Public Health Laboratory

characteristic: collected by

characteristic: collection date

text: USA:AK

text: Antigone canadensis

characteristic: host

text: crane stool (Grus canadensis)

characteristic: isolation source

characteristic: ontological term

text: Campylobacter jejuni

text: animal

text: Pathogen: environmental/food/other sample from Campylobacter jejuni


characteristic: External Id

text: veterinary clinical/research, other animal

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: USA:AK

text: Antigone canadensis

text: crane stool (Grus canadensis)

text: Campylobacter jejuni

text: animal

characteristic: source type


text: environmental-water| dairy

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: Outbreak

text: USA:AK

text: dairy gutter

text: dairy:ENVO_00003862| watercourse:ENVO_00000029

text: Campylobacter jejuni

characteristic: organism

characteristic: pfge primary enzyme pattern

text: environmental

characteristic: title


text: environmental-animal housing

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: USA:AK

characteristic: geo loc name

text: feces right side calf barn

text: agricultural feature:ENVO_00000077| feces:UBERON_0001988| hindlimb zeugopod:UBERON_0003823| right:PATO_0000367

text: Campylobacter jejuni

text: environmental

text: Bos taurus

characteristic: specific host

characteristic: strain


characteristic: External Id

text: environmental-animal housing

characteristic: INSDC center name

text: live

text: Pathogen.env

characteristic: collected by

characteristic: collection date

text: USA:AK

text: feces calf barn

characteristic: isolation source

text: agricultural feature:ENVO_00000077| feces:UBERON_0001988| hindlimb zeugopod:UBERON_0003823

characteristic: ontological term

text: Campylobacter jejuni

text: environmental

text: Bos taurus


text: environmental-farm| dairy

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

text: USA:AK

text: dairy farm field

text: dairy farm:CURATION_0001498| field:ENVO_01000352

text: Campylobacter jejuni

text: environmental

characteristic: source type


text: environmental-animal housing| environmental-farm

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: Outbreak

text: USA:AK

text: dairy farm calf barn

text: agricultural feature:ENVO_00000077| dairy farm:CURATION_0001498| hindlimb zeugopod:UBERON_0003823

text: Campylobacter jejuni

characteristic: organism

characteristic: pfge primary enzyme pattern

text: environmental

characteristic: title


characteristic: External Id

text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: SRA accession

text: USA:AK

characteristic: geo loc name

text: dairy farm calf barn

text: Campylobacter jejuni

text: environmental

characteristic: strain


text: environmental-farm| dairy

characteristic: INSDC center name

text: live

text: Pathogen.env

characteristic: collected by

characteristic: collection date

text: USA:AK

text: dairy farm field

characteristic: isolation source

characteristic: ontological term

text: Campylobacter jejuni

text: environmental


text: clinical/research

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: FDA

characteristic: fda lab id

text: Viet Nam

text: Salmonella enterica

text: GenomeTrakr

characteristic: project name

text: United States Food and Drug Administration|Office of Regulatory Affairs|San Francisco Laboratory

characteristic: sequenced by

text: Pathogen: environmental/food/other sample from Salmonella enterica


Paenibacillus durus ATCC 35681

characteristic: External Id

text: Universiti Sains Malaysia

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: Brazil: Parana State

text: Wheat roots

text: Paenibacillus durus ATCC 35681

characteristic: organism

text: cell culture

characteristic: sample type

text: ATCC 35681

text: Microbe sample from Paenibacillus durus ATCC 35681

characteristic: title

text: type strain of Bacillus azotofixans

characteristic: type material


text: Universite Laval

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: India

characteristic: geo loc name

text: chicken

characteristic: host

text: Aeromonas salmonicida

text: whole organism

characteristic: strain

text: Microbe sample from Aeromonas salmonicida


text: Universite Laval

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: India

text: fish

text: Aeromonas salmonicida

text: whole organism


text: fish

characteristic: IFSAC Category

text: FDA Center for Food Safety and Applied Nutrition

text: live

characteristic: INSDC status

text: Pathogen.env

text: FDA

characteristic: collected by

characteristic: collection date

text: Thailand

text: frozen whole tilapia

characteristic: isolation source

text: fish (frozen):FOODON_03301083, tilapia:FOODON_03412434, whole:FOODON_03430131

characteristic: ontological term

text: Salmonella enterica

text: GenomeTrakr

text: United States Food and Drug Administration|Office of Regulatory Affairs|Southeast Food and Feed Laboratory

text: food

characteristic: source type


characteristic: External Id

text: fish

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: FDA

characteristic: fda lab id

text: Sierra Leone

text: smoked dried fish

text: fish smoked, dried:FOODON_03310852

text: Salmonella enterica

characteristic: organism

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: food


text: multi-ingredient| grains| herbs

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: Washington State Department of Health | Public Health Laboratories

text: USA:WA

characteristic: geo loc name

text: basil pesto pasta salad

text: pesto sauce:FOODON_03310218| pasta:FOODON_03306347| salad:FOODON_03316042

text: Listeria monocytogenes

text: food

text: Pathogen: environmental/food/other sample from Listeria monocytogenes

characteristic: title


Polynucleobacter Ross1-W9

text: University of Innsbruck

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: collection date

text: Austria

text: freshwater

text: Polynucleobacter parvulilacunae

text: freshwater

characteristic: sample type

characteristic: strain

text: Polynucleobacter sp. Ross1-W9

text: type strain of Polynucleobacter parvulilacunae

characteristic: type-material


characteristic: External Id

text: multi-ingredient

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: AP-LTMC-219 (01)

text: environmental/food/other

text: TX Dept State Health Services, Milk and Dairy Div.

characteristic: collected by

text: USA:TX

text: food

characteristic: isolation source

characteristic: ontological term

text: Listeria monocytogenes

characteristic: organism

characteristic: pfge primary enzyme pattern

text: GenomeTrakr

text: food

characteristic: source type


text: multi-ingredient

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: USA:TX

characteristic: geo loc name

text: food

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: food


text: multi-ingredient

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: AP-LTMC-220 (01)

text: environmental/food/other

characteristic: collection date

text: USA:TX

text: food

text: Listeria monocytogenes

text: GenomeTrakr

text: food

characteristic: strain

characteristic: title


characteristic: External Id

text: chicken

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:MN

text: chicken

characteristic: isolation source

characteristic: ontological term

text: Salmonella enterica

characteristic: organism

text: food


text: chicken

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:CA

text: chicken

text: Salmonella enterica

text: food

characteristic: source type


text: chicken

text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:AR

characteristic: geo loc name

text: chicken

text: Salmonella enterica

text: food


text: chicken

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:OH

text: chicken

text: Salmonella enterica

text: food


text: chicken

text: live

characteristic: INSDC status

text: Pathogen.env

text: FDA Contracted Laboratory

characteristic: collection date

text: USA:TX

text: chicken

text: Salmonella enterica

text: food


text: chicken

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:CO

text: chicken

text: Salmonella enterica

text: food

characteristic: strain

characteristic: title


characteristic: External Id

text: chicken

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:MD

text: chicken

text: Salmonella enterica

text: food


text: chicken

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:KY

text: chicken

characteristic: isolation source

characteristic: ontological term

text: Salmonella enterica

text: food


text: chicken

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:IL

text: chicken

text: Salmonella enterica

characteristic: organism

text: food


text: chicken

characteristic: IFSAC Category

characteristic: INSDC center name

text: live

text: Pathogen.env

text: FDA Contracted Laboratory

text: USA:CA

text: chicken

text: Salmonella enterica

text: food


text: chicken

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: FDA Contracted Laboratory

text: USA:OH

text: chicken

text: Salmonella enterica

text: food

characteristic: source type


text: chicken

text: live

text: Pathogen.env

text: FDA Contracted Laboratory

text: USA:MN

characteristic: geo loc name

text: chicken

text: Salmonella enterica

text: food


text: chicken

characteristic: INSDC first public

text: live

text: Pathogen.env

text: FDA Contracted Laboratory

text: USA:NE

text: chicken

text: Salmonella enterica

text: food


text: chicken

characteristic: INSDC last update

text: live

text: Pathogen.env

text: FDA Contracted Laboratory

text: USA:KY

text: chicken

text: Salmonella enterica

text: food


text: turkey

text: live

characteristic: INSDC status

text: Pathogen.env

text: FDA Contracted Laboratory

text: USA:MN

text: turkey

text: domestic turkey:FOODON_03414166

text: Salmonella enterica

text: food


text: chicken

text: live

text: Pathogen.env

text: FDA Contracted Laboratory

characteristic: collection date

text: USA:CO

text: chicken

text: Salmonella enterica

text: food


text: chicken

text: live

text: Pathogen.env

text: FDA Contracted Laboratory

text: USA:IL

text: chicken

text: Salmonella enterica

text: food

characteristic: strain


text: chicken

text: live

text: Pathogen.env

text: FDA Contracted Laboratory

text: USA:AR

text: chicken

text: Salmonella enterica

text: food

characteristic: title


characteristic: External Id

text: chicken

text: live

text: Pathogen.env

text: FDA Contracted Laboratory

text: USA:AZ

text: chicken

text: Salmonella enterica

text: food


text: chicken

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: FDA Contracted Laboratory

text: USA:PA

text: chicken

text: Salmonella enterica

text: food


text: turkey

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:CA

text: turkey

characteristic: isolation source

text: domestic turkey:FOODON_03414166

text: Salmonella enterica

text: food


text: chicken

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

text: FDA Contracted Laboratory

text: USA:OH

text: chicken

characteristic: ontological term

text: Salmonella enterica

characteristic: organism

text: food


text: chicken

characteristic: INSDC center name

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:MN

text: chicken

text: Salmonella enterica

text: food


text: chicken

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:CA

characteristic: geo loc name

text: chicken

text: Salmonella enterica

text: food

characteristic: source type


text: chicken

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:AR

text: chicken

text: Salmonella enterica

text: food


text: chicken

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

characteristic: collection date

text: USA:IL

text: chicken

text: Salmonella enterica

text: food


text: chicken

text: live

text: Pathogen.env

text: FDA Contracted Laboratory

text: USA:CA

text: chicken

text: Salmonella enterica

text: food

characteristic: strain

characteristic: title


characteristic: External Id

text: chicken

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:PA

text: chicken

text: Salmonella enterica

text: food


text: chicken

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:MA

text: chicken

text: Salmonella enterica

text: food


text: turkey

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:PA

text: turkey

characteristic: isolation source

text: domestic turkey:FOODON_03414166

text: Salmonella enterica

text: food