text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Hong Kong

text: Anaerobic digester

text: 22.2800 N 114.1700 E

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Hong Kong - AD_UKC115_MetaG


status: PUBLIC

characteristic: External Id

tag: Namespace:DOE Joint Genome Institute

text: Engineered | Bioreactor | Anaerobic | Digestate | Unclassified

tag: attribute

characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: collection date

text: Japan

characteristic: geo loc name

text: Anaerobic digester

characteristic: isolation source

text: 35.9200 N 139.6300 E

characteristic: lat lon

text: activated sludge metagenome

characteristic: organism

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHW2_MetaG

characteristic: title

type: SRA BioSample


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Japan

text: anaerobic digester from wastewater treatment plant

text: 36.2900 N 139.3800 E

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR3_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA

text: 37.8000 N 122.2700 W

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC075_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA

text: Anaerobic digester

text: 40.1200 N 87.6300 W

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC045_MetaG


text: Host-associated | Plants | Phyllosphere | Phylloplane/Leaf | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Mexico:Guanajuato, Mexico

text: Guanajuato, Mexico

text: 21.7658 N 100.1630 W

text: plant metagenome

text: Agave microbial communities from Guanajuato, Mexico - Mg.Ma.e


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Canada

text: 49.2500 N 123.1000 W

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Canada - AD_UKC129_MetaG


text: Engineered | Bioreactor | Anaerobic | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Washington, USA

text: Anaerobic biogas reactor

text: 47.6525 N 122.3049 W

text: bioreactor metagenome

text: Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C13 SIP DNA


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Washington, USA

text: Anaerobic biogas reactor

text: 47.6525 N 122.3049 W

text: bioreactor metagenome

text: Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_B C13 SIP DNA


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Washington, USA

text: Anaerobic biogas reactor

text: 47.6525 N 122.3049 W

text: bioreactor metagenome

text: Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_B C12 SIP DNA


text: Host-associated | Mammals | Digestive system | Large intestine | Fecal

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Wisconsin

text: Capybara group feces

text: 43.0700 N 89.4 W

text: gut metagenome

text: Capybara group fecal microbial communities from Wisconsin, USA - P1105 metagenome


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Wisconsin

text: Ring-tailed lemur group feces

text: 43.0700 N 89.4 W

text: gut metagenome

text: Ring-tailed lemur group fecal microbial communities from Wisconsin, USA - L1105 metagenome


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Wisconsin

text: Western lowland gorilla individual feces

text: 43.7800 N 88.79 W

text: gut metagenome

text: Western lowland gorrila individual fecal microbial communities from Wisconsin, USA - Go1022B metagenome


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Washington, USA

text: Anaerobic biogas reactor

text: 47.6525 N 122.3049 W

text: bioreactor metagenome

text: Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C12 SIP DNA


text: Engineered | WWTP | Aerobic digester | Activated sludge | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Austria: Klosterneuburg

text: activated sludge, waste water treatment plant

text: 48.3000 N 16.2000 E

text: activated sludge metagenome

text: Active sludge microbial communities from wastewater treatment plant in Klosterneuburg, Austria - C40_LAv3


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Austria: Klosterneuburg

text: 48.3000 N 16.2000 E

text: activated sludge metagenome

text: Active sludge microbial communities from wastewater treatment plant in Klosterneuburg, Austria - C20_HNv3


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Austria: Klosterneuburg

text: 48.3000 N 16.2000 E

text: activated sludge metagenome

text: Active sludge microbial communities from wastewater treatment plant in Klosterneuburg, Austria - C06_H0v3


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Wisconsin

text: Eastern black-and-white colobus group feces

text: 43.0700 N 89.4 W

text: gut metagenome

text: Eastern black-and-white colobus group fecal microbial communities from Wisconsin, USA - Cm1105 metagenome


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Wisconsin

text: 43.0700 N 89.4 W

text: gut metagenome

text: Eastern black-and-white colobus group fecal microbial communities from Wisconsin, USA - Cm827 metagenome


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Wisconsin

text: Orangutan group feces

text: 43.0700 N 89.4 W

text: gut metagenome

text: Orangutan group fecal microbial communities from fecal samples from Wisconsin, USA - O1105 metagenome


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Wisconsin

text: Orangutan group feces

text: 43.0700 N 89.4 W

text: gut metagenome

text: Orangutan group fecal microbial communities from Wisconsin, USA - O827 metagenome


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Wisconsin

text: 43.7800 N 88.79 W

text: gut metagenome

text: Western lowland gorrila individual fecal microbial communities from Wisconsin, USA - Go1022A metagenome


text: Host-associated | Mammals | Digestive system | Large intestine | Fecal

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Wisconsin

text: Ring-tailed lemur group feces

text: 43.0700 N 89.4 W

text: gut metagenome

text: Ring-tailed lemur group fecal microbial communities from Wisconsin, USA - L827 metagenome


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Wisconsin

text: Capybara group feces

text: 43.0700 N 89.4 W

text: gut metagenome

text: Capybara group fecal microbial communities from Wisconsin, USA - P827 metagenome


text: Engineered | Bioreactor | Anaerobic | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Washington, USA

text: Anaerobic biogas reactor

text: 47.6525 N 122.3049 W

text: bioreactor metagenome

text: Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2 time_0 SIP DNA


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Washington, USA

text: Anaerobic biogas reactor

text: 47.6525 N 122.3049 W

text: bioreactor metagenome

text: Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1 time_0 SIP DNA


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Washington, USA

text: Anaerobic biogas reactor

text: 47.6525 N 122.3049 W

text: bioreactor metagenome

text: Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_A C12 SIP DNA


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Washington, USA

text: Anaerobic biogas reactor

text: 47.6525 N 122.3049 W

text: bioreactor metagenome

text: Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_A C13 SIP DNA


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Washington, USA

text: Anaerobic biogas reactor

text: 47.6525 N 122.3049 W

text: bioreactor metagenome

text: Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C12 SIP DNA


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Washington, USA

text: Anaerobic biogas reactor

text: 47.6525 N 122.3049 W

text: bioreactor metagenome

text: Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C13 SIP DNA


text: Engineered | Bioreactor | Anaerobic | Digestate | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA

text: Anaerobic digester

text: 41.1200 N 87.6400 W

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC048_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Canada

text: anaerobic digester from wastewater treatment plant

text: 49.2500 N 123.1000 W

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Canada - AD_UKC130_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA

text: Anaerobic digester

text: 41.5300 N 90.4300 W

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC057_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA

text: Anaerobic digester

text: 39.8400 N 89.0000 W

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC035_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA

text: Anaerobic digester

text: 39.8400 N 89.0000 W

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC034_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Japan

text: Anaerobic digester

text: 37.4300 N 138.8300 E

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA6_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Japan

text: Anaerobic digester

text: 37.4300 N 138.8300 E

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA4_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Japan

text: Anaerobic digester

text: 37.4300 N 138.8300 E

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA5_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Japan

text: 36.2900 N 139.3800 E

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNMR1_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Japan

text: Anaerobic digester

text: 35.9200 N 139.6300 E

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHW1_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Japan

text: Anaerobic digester

text: 34.6500 N 135.0500 E

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR2_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA

text: 33.8000 N 118.2800 W

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC096_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA

text: 33.8000 N 118.2800 W

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC095_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Hong Kong

text: Anaerobic digester

text: 22.2800 N 114.1700 E

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Hong Kong - AD_UKC113_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Hong Kong

text: Anaerobic digester

text: 22.2800 N 114.1700 E

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Hong Kong - AD_UKC119_MetaG


text: Engineered | Bioreactor | Anaerobic | Digestate | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: China

text: Anaerobic digester

text: 30.6600 N 104.0600 E

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from China - AD_SCU002_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Japan

text: anaerobic digester from wastewater treatment plant

text: 43.7700 N 142.3700 E

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS2_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA

text: 42.3500 N 70.9600 W

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC078_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA

text: 42.3500 N 70.9600 W

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC077_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA

text: active sludge of municipal wastewater-treating anaerobic digesters

text: 41.8400 N 87.6800 W

text: anaerobic digester metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_STIC10_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA

text: Anaerobic digester

text: 41.5300 N 90.4300 W

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC059_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA

text: 40.3000 N 88.1500 W

text: anaerobic digester metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC030_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA

text: 40.3000 N 88.1500 W

text: anaerobic digester metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC028_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA

text: 39.8800 N 75.2200 W

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC087_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA

text: Anaerobic digester

text: 39.8400 N 89.0000 W

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC033_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA

text: 39.8800 N 75.2200 W

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC073_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Japan

text: Anaerobic digester

text: 37.4300 N 138.8300 E

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA7_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Japan

text: Anaerobic digester

text: 34.7200 N 135.2700 E

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHG2_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Japan

text: Anaerobic digester

text: 34.7200 N 135.2700 E

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHG1_MetaG


text: Engineered | Bioreactor | Anaerobic | Digestate | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Hong Kong

text: Anaerobic digester

text: 22.2800 N 114.1700 E

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Hong Kong - AD_UKC111_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Hong Kong

text: Anaerobic digester

text: 22.2800 N 114.1700 E

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Hong Kong - AD_UKC109_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Hong Kong

text: Anaerobic digester

text: 22.2800 N 114.1700 E

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Hong Kong - AD_UKC105_MetaG


text: Engineered | WWTP | Aerobic digester | Activated sludge | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Austria:Klosterneuburg, Austria

text: activated sludge

text: 48.3000 N 16.2000 E

text: activated sludge metagenome

text: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge D21_HN


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA

text: Anaerobic digester

text: 42.1200 N 87.6500 W

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC052_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Japan

text: Anaerobic digester

text: 34.6500 N 135.0500 E

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR3_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Austria:Klosterneuburg, Austria

text: activated sludge

text: 48.3000 N 16.2000 E

text: activated sludge metagenome

text: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge C26_HAv2


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Austria:Klosterneuburg, Austria

text: activated sludge

text: 48.3000 N 16.2000 E

text: activated sludge metagenome

text: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge DR06_HAN


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Austria:Klosterneuburg, Austria

text: activated sludge

text: 48.3000 N 16.2000 E

text: activated sludge metagenome

text: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge C21_HANv2


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Austria:Klosterneuburg, Austria

text: activated sludge

text: 48.3000 N 16.2000 E

text: activated sludge metagenome

text: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge D80_L00N


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Austria:Klosterneuburg, Austria

text: activated sludge

text: 48.3000 N 16.2000 E

text: activated sludge metagenome

text: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge D88_L00N


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Austria:Klosterneuburg, Austria

text: activated sludge

text: 48.3000 N 16.2000 E

text: activated sludge metagenome

text: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge D81_LN


text: Host-associated | Plants | Phyllosphere | Phylloplane/Leaf | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Mexico:Guanajuato, Mexico

text: Guanajuato, Mexico

text: 21.0936 N 100.2988 W

text: plant metagenome

text: Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Mexico:Guanajuato, Mexico

text: Guanajuato, Mexico

text: 21.7658 N 100.1630 W

text: plant metagenome

text: Agave microbial communities from Guanajuato, Mexico - Or.Sf.e


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Mexico:Guanajuato, Mexico

text: Guanajuato, Mexico

text: 21.7658 N 100.1630 W

text: plant metagenome

text: Agave microbial communities from Guanajuato, Mexico - Mg.Sf.e


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Mexico:Guanajuato, Mexico

text: Guanajuato, Mexico

text: 21.0936 N 100.2988 W

text: plant metagenome

text: Agave microbial communities from Guanajuato, Mexico - Or.Ma.e


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Mexico:Guanajuato, Mexico

text: Guanajuato, Mexico

text: 21.7658 N 100.1630 W

text: plant metagenome

text: Agave microbial communities from Guanajuato, Mexico - At.Am.e


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Mexico:Guanajuato, Mexico

text: Guanajuato, Mexico

text: 21.7658 N 100.1630 W

text: plant metagenome

text: Agave microbial communities from Guanajuato, Mexico - Mg.Sf.rz


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Mexico:Guanajuato, Mexico

text: Guanajuato, Mexico

text: 21.0936 N 100.2988 W

text: plant metagenome

text: Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz


text: Host-associated | Plants | Roots | Rhizosphere | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Mexico:Guanajato, Mexico

text: rhizosphere

text: 21.0411 N 103.9083 W

text: plant metagenome

text: Agave microbial communities from Guanajuato, Mexico - At.Am.rz


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Mexico:Guanajuato, Mexico

text: Guanajuato, Mexico

text: 20.6863 N 101.8747 W

text: plant metagenome

text: Agave microbial communities from Guanajuato, Mexico - At.P.rz


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Mexico:Guanajuato, Mexico

text: Guanajuato, Mexico

text: 21.7658 N 100.1630 W

text: plant metagenome

text: Agave microbial communities from Guanajuato, Mexico - As.Sf.rz


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Mexico:Guanajuato, Mexico

text: Guanajuato, Mexico

text: 21.7658 N 100.1630 W

text: plant metagenome

text: Agave microbial communities from Guanajuato, Mexico - As.Ma.e


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Mexico:Guanajuato, Mexico

text: Guanajuato, Mexico

text: 21.0936 N 100.2988 W

text: plant metagenome

text: Agave microbial communities from Guanajuato, Mexico - As.Ma.rz


text: Engineered | WWTP | Aerobic digester | Activated sludge | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Austria:Klosterneuburg, Austria

text: activated sludge

text: 48.3000 N 16.2000 E

text: activated sludge metagenome

text: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge D85_L00A


text: Engineered | Bioreactor | Anaerobic | Digestate | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA

text: anaerobic digester from wastewater treatment plant

text: 39.8800 N 75.2200 W

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC097_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA

text: Anaerobic digester

text: 37.7800 N 122.4200 W

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC125_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA

text: 39.8800 N 75.2200 W

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC071_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA

text: active sludge of municipal wastewater-treating anaerobic digesters

text: 40.3000 N 88.1500 W

text: anaerobic digester metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC032_MetaG


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Hong Kong

text: Anaerobic digester

text: 22.2800 N 114.1700 E

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Hong Kong - AD_UKC117_MetaG


text: Host-associated | Plants | Phyllosphere | Phylloplane/Leaf | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Mexico:Guanajuato, Mexico

text: Guanajuato, Mexico

text: 21.7658 N 100.1630 W

text: plant metagenome

text: Agave microbial communities from Guanajuato, Mexico - Or.Sf.rz


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Mexico:Guanajuato, Mexico

text: Guanajuato, Mexico

text: 21.7658 N 100.1630 W

text: plant metagenome

text: Agave microbial communities from Guanajuato, Mexico - As.Sf.e


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA

text: Anaerobic digester

text: 41.5300 N 90.4300 W

text: activated sludge metagenome

text: Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC055_MetaG


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Hallerella succinigenes

characteristic: strain

text: Fibrobacter sp. UWS3

text: type strain of Hallerella succinigenes

characteristic: type-material


characteristic: External Id

text: DOE Joint Genome Institute

characteristic: INSDC center name

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

text: USA:Greenbriar Cemetary, Tennessee

text: Lactifluus volemus

text: Lactifluus volemus BPL652 Standard Draft


text: NIEHS

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: 8-10 weeks

characteristic: age

text: ovariectomized

characteristic: condition

text: Mus musculus

text: whole uterus

text: Input


text: NIEHS

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 8-10 weeks

text: PGR antibody (Santa Cruz #sc-7208)

characteristic: antibody

text: ovariectomized

text: Mus musculus

text: whole uterus

text: C57BL6/6J, 129 mixed strain


text: California Department of Public Health

text: live

text: Pathogen.cl

characteristic: SRA accession

characteristic: culture-collection

text: Escherichia coli ATCC 8739

text: ATCC 8739


GSC-1228 si-NC

text: live

text: Human

text: Department of Epigenomics, Nagoya City University Graduate School of Medical Sciences, 1 Kawasumi, Mizuho-cho, Mizuho-ku, Nagoya 467-8601, Japan

characteristic: biomaterial provider

text: Giloma sten cell, 1228, si-NC, replicate 1

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: male

characteristic: sex

text: Human glioblastoma

characteristic: tissue

text: Human sample from Homo sapiens

characteristic: title


GSC-1228 si-Notch1

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Human

text: Department of Epigenomics, Nagoya City University Graduate School of Medical Sciences, 1 Kawasumi, Mizuho-cho, Mizuho-ku, Nagoya 467-8602, Japan

text: Giloma sten cell, 1228,si-Notch1, replicate 1

text: Homo sapiens

text: male

text: Human glioblastoma

text: Human sample from Homo sapiens


GSC-1228 si-JAG1

characteristic: INSDC last update

text: live

text: Human

text: Department of Epigenomics, Nagoya City University Graduate School of Medical Sciences, 1 Kawasumi, Mizuho-cho, Mizuho-ku, Nagoya 467-8603, Japan

text: Giloma sten cell, 1228, si-JAG1, replicate 1

text: Homo sapiens

text: male

text: Human glioblastoma

text: Human sample from Homo sapiens


GSC-222 si-NC

characteristic: INSDC secondary accession

text: live

text: Human

text: Department of Epigenomics, Nagoya City University Graduate School of Medical Sciences, 1 Kawasumi, Mizuho-cho, Mizuho-ku, Nagoya 467-8604, Japan

text: Giloma sten cell, 222, si-NC, replicate 1

text: Homo sapiens

text: male

text: Human glioblastoma

text: Human sample from Homo sapiens


GSC-222 si-Notch1

text: live

characteristic: INSDC status

text: Human

text: Department of Epigenomics, Nagoya City University Graduate School of Medical Sciences, 1 Kawasumi, Mizuho-cho, Mizuho-ku, Nagoya 467-8605, Japan

text: Giloma sten cell, 222,si-Notch1, replicate 1

text: Homo sapiens

text: male

text: Human glioblastoma

text: Human sample from Homo sapiens


GSC-222 si-JAG1

text: live

text: Human

characteristic: NCBI submission model

text: Department of Epigenomics, Nagoya City University Graduate School of Medical Sciences, 1 Kawasumi, Mizuho-cho, Mizuho-ku, Nagoya 467-8606, Japan

text: Giloma sten cell, 222, si-JAG1, replicate 1

text: Homo sapiens

text: male

text: Human glioblastoma

text: Human sample from Homo sapiens


text: Host-associated | Plants | Phyllosphere | Caulosphere | Unclassified

characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

characteristic: collection date

characteristic: description

text: USA: Clatskanie, Oregon

characteristic: geo loc name

text: Populus trichocarpa

characteristic: host

text: 46.102329 N 123.20892200 W

characteristic: lat lon

text: plant metagenome

text: Metagenome or environmental sample from Plant associated eukaryotic communities from Populus trichocarpa stem in Clatskanie, Oregon, USA - Besc22_0 h_r1_b


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: USA: Clatskanie, Oregon

text: Populus trichocarpa

text: P. trichocarpa stem

characteristic: isolation source

text: 46.102329 N 123.208922 W

text: plant metagenome

characteristic: organism

text: Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc801_24 h_r3_b


characteristic: External Id

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Clatskanie, Oregon

text: Populus trichocarpa

text: P. trichocarpa stem

text: 46.102329 N 123.208922 W

text: plant metagenome

text: Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc801_24 h_r1_a

characteristic: title


text: DOE Joint Genome Institute

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: USA: Clatskanie, Oregon

text: Populus trichocarpa

text: P. trichocarpa stem

text: 46.102329 N 123.208922 W

text: plant metagenome

text: Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc22_72 h_r3_c


text: DOE Joint Genome Institute

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: USA: Clatskanie, Oregon

text: Populus trichocarpa

text: P. trichocarpa stem

text: 46.102329 N 123.208922 W

text: plant metagenome

text: Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc22_72 h_r2_a


text: DOE Joint Genome Institute

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

text: USA: Clatskanie, Oregon

text: Populus trichocarpa

text: P. trichocarpa stem

text: 46.102329 N 123.208922 W

text: plant metagenome

text: Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc22_0 h_r2_a


characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: USA: Clatskanie, Oregon

text: Populus trichocarpa

text: P. trichocarpa stem

text: 46.102329 N 123.208922 W

text: plant metagenome

text: Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc801_0 h_r2_a


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: collection date

text: USA: Clatskanie, Oregon

text: Populus trichocarpa

text: P. trichocarpa stem

text: 46.102329 N 123.208922 W

text: plant metagenome

text: Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc801_0 h_r3_a


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Clatskanie, Oregon

characteristic: geo loc name

text: Populus trichocarpa

text: P. trichocarpa stem

text: 46.102329 N 123.208922 W

text: plant metagenome

text: Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc801_72 h_r1_b


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Clatskanie, Oregon

text: Populus trichocarpa

characteristic: host

text: P. trichocarpa stem

text: 46.102329 N 123.208922 W

text: plant metagenome

text: Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc22_24 h_r2_c


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Clatskanie, Oregon

text: Populus trichocarpa

text: P. trichocarpa stem

text: 46.102329 N 123.208922 W

characteristic: lat lon

text: plant metagenome

text: Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc22_24 h_r1_b


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: USA: Clatskanie, Oregon

text: Populus trichocarpa

text: P. trichocarpa stem

text: 46.102329 N 123.208922 W

text: plant metagenome

text: Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc22_0 h_r3_a


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Clatskanie, Oregon

text: Populus trichocarpa

text: P. trichocarpa stem

characteristic: isolation source

text: 46.102329 N 123.208922 W

text: plant metagenome

text: Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc22_24 h_r3_b


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Clatskanie, Oregon

text: Populus trichocarpa

text: P. trichocarpa stem

text: 46.102329 N 123.208922 W

text: plant metagenome

characteristic: organism

text: Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc801_3 week_r3_a


characteristic: External Id

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Clatskanie, Oregon

text: Populus trichocarpa

text: P. trichocarpa stem

text: 46.102329 N 123.208922 W

text: plant metagenome

text: Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc801_72 h_r2_a


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Clatskanie, Oregon

text: Populus trichocarpa

text: P. trichocarpa stem

text: 46.102329 N 123.208922 W

text: plant metagenome

text: Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc801_3 week_r1_a

characteristic: title


text: Host-associated | Plants | Phyllosphere | Caulosphere | Unclassified

text: DOE Joint Genome Institute

characteristic: INSDC center name

text: live

text: Metagenome or environmental

text: USA: Clatskanie, Oregon

text: Populus trichocarpa

text: P. trichocarpa stem

text: 46.102329 N 123.208922 W

text: plant metagenome

text: Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc801_24 h_r2_a


text: DOE Joint Genome Institute

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: USA: Clatskanie, Oregon

text: Populus trichocarpa

text: P. trichocarpa stem

text: 46.102329 N 123.208922 W

text: plant metagenome

text: Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc801_72 h_r3_c


text: DOE Joint Genome Institute

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: USA: Clatskanie, Oregon

text: Populus trichocarpa

text: P. trichocarpa stem

text: 46.102329 N 123.208922 W

text: plant metagenome

text: Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc801_3 week_r2_a


text: DOE Joint Genome Institute

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: USA: Clatskanie, Oregon

text: Populus trichocarpa

text: P. trichocarpa stem

text: 46.102329 N 123.208922 W

text: plant metagenome

text: Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc801_0 h_r1_a


text: DOE Joint Genome Institute

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: USA: Clatskanie, Oregon

text: Populus trichocarpa

text: P. trichocarpa stem

text: 46.102329 N 123.208922 W

text: plant metagenome

text: Plant associated eukaryotic communities from Populus trichocarpa stem in Oregon, USA - Besc22_72 h_r1_c


text: Host-associated | Mammals: Human | Digestive system | Large intestine | Fecal

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

text: Switzerland: University of Zurich

text: 47.3743221 N 8.5509812 E

text: feces metagenome

text: Human fecal microbial communities from the University of Zurich, Switzerland, analyzing pathogenic and commensal bacteria - 1


text: Host-associated | Mammals: Human | Respiratory system | Pharynx/Throat | Nasopharynx

characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:San Diego State University, San Diego

text: Homo sapiens

text: 32.7757217 N 117.074078 W

text: human lung metagenome

text: Human nasopharyngeal viral communities from healthy adults :Mariella virus


text: University of Helsinki

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Finland: Rorstrand

text: soil

text: wood decay metagenome

text: Metagenome or environmental sample from wood decay metagenome


text: University of Helsinki

text: live

text: Metagenome or environmental

characteristic: collection date

text: Finland: Rorstrand

text: wood

text: wood decay metagenome


text: University of Helsinki

text: live

text: Metagenome or environmental

text: Finland: Rorstrand

characteristic: geo loc name

text: soil

text: wood decay metagenome

text: C8_cell 45_tree106


text: University of Helsinki

text: live

text: Metagenome or environmental

text: Finland: Rorstrand

text: soil

characteristic: host

text: wood decay metagenome

text: A7_cell 13_tree53


text: University of Helsinki

text: live

text: Metagenome or environmental

text: Finland: Rorstrand

text: soil

text: wood decay metagenome

text: D8_cell 65_tree26


text: University of Helsinki

text: live

text: Metagenome or environmental

text: Finland: Rorstrand

text: soil

text: wood decay metagenome

text: E8_R064_34-2009-DSS KOKOOMANÄYTE


text: University of Helsinki

text: live

text: Metagenome or environmental

text: Finland: Rorstrand

text: soil

text: wood decay metagenome

text: H9_R064_34-2009-DSS(1-10) 1


text: University of Helsinki

text: live

text: Metagenome or environmental

text: Finland: Rorstrand

text: soil

text: wood decay metagenome

text: C7_cell 25_tree14


text: University of Helsinki

text: live

text: Metagenome or environmental

text: Finland: Rorstrand

text: soil

text: wood decay metagenome

text: D11_R018_6-2009-10(1-10) 1


text: University of Helsinki

text: live

text: Metagenome or environmental

text: Finland: Rorstrand

text: soil

text: wood decay metagenome

text: E11_R0186-2009-10(1-10) 2


text: University of Helsinki

text: live

text: Metagenome or environmental

text: Finland: Nikkila

text: soil

text: wood decay metagenome


text: University of Helsinki

text: live

text: Metagenome or environmental

text: Finland: Nummenkyla

text: soil

text: wood decay metagenome


text: University of Helsinki

text: live

text: Metagenome or environmental

text: Finland: Lintumetsantie

text: soil

text: wood decay metagenome


text: University of Helsinki

text: live

text: Metagenome or environmental

text: Finland: Uusimaa

text: soil

text: wood decay metagenome

text: B2_R014_cell 4_tree_3


text: University of Helsinki

text: live

text: Metagenome or environmental

text: Finland: Uusimaa

text: soil

text: wood decay metagenome

text: C2_R016_cell 4_tree_4


text: University of Helsinki

text: live

text: Metagenome or environmental

text: Finland: Rorstrand

text: soil

text: wood decay metagenome

text: A1_R003_cell 1_tree_5


text: University of Helsinki

text: live

text: Metagenome or environmental

text: Finland: Uusimaa

text: soil

text: wood decay metagenome

text: D2_R017_cell 5_tree_27


text: University of Helsinki

text: live

text: Metagenome or environmental

text: Finland: Uusimaa

text: soil

text: wood decay metagenome

text: E2_R018_cell 6_tree_10


text: University of Helsinki

text: live

text: Metagenome or environmental

text: Finland: Uusimaa

text: soil

text: wood decay metagenome

text: F2_R024_cell 8_tree_4


text: University of Helsinki

text: live

text: Metagenome or environmental

text: Finland: Uusimaa

text: soil

text: wood decay metagenome

text: G2_R025_cell 8_tree_15


text: University of Helsinki

text: live

text: Metagenome or environmental

text: Finland: Uusimaa

text: soil

text: wood decay metagenome

text: H2_R020_cell 8_tree_103


text: University of Helsinki

text: live

text: Metagenome or environmental

text: Finland: Rorstrand

text: wood

text: wood decay metagenome


text: University of Helsinki

text: live

text: Metagenome or environmental

text: Finland: Rorstrand

text: soil

text: wood decay metagenome

text: B1_R002_cell 1_tree_13


text: University of Helsinki

text: live

text: Metagenome or environmental

text: Finland: Rorstrand

text: soil

text: wood decay metagenome

text: C1_R004_cell 1_tree_24


text: University of Helsinki

text: live

text: Metagenome or environmental

text: Finland: Rorstrand

text: soil

text: wood decay metagenome

text: D1_R008_cell 2_tree_13


text: University of Helsinki

text: live

text: Metagenome or environmental

text: Finland: Rorstrand

text: soil

text: wood decay metagenome

text: E1_R006_cell 2_tree_14


text: University of Helsinki

text: live

text: Metagenome or environmental

text: Finland: Rorstrand

text: soil

text: wood decay metagenome

text: F1_R007_cell 2_tree_2


text: University of Helsinki

text: live

text: Metagenome or environmental

text: Finland: Rorstrand

text: soil

text: wood decay metagenome


text: University of Helsinki

text: live

text: Metagenome or environmental

text: Finland: Rorstrand

text: wood

text: wood decay metagenome

text: R106a_25/14.2, R106


text: University of Helsinki

text: live

text: Metagenome or environmental

text: Finland: Rorstrand

text: wood

text: wood decay metagenome

text: R106r_25/14.2, R106


Candidatus Sulcia muelleri

text: Cornell University

text: live

text: Microbe, viral or environmental

text: host-associated

characteristic: env biome

text: bacteriome

characteristic: env feature

text: bacteriome

text: USA: Ithaca, New York

text: Graphocephala coccinea

text: bacteriome of Graphocephala coccinea

text: 42.45 N 76.47000000 W

characteristic: lat lon

text: Candidatus Karelsulcia muelleri

text: tissue

characteristic: sample type

text: Gra

characteristic: strain

text: Candidatus Sulcia muelleri isolated from Graphocephala coccinea


characteristic: External Id

text: environmental-water

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FDA

characteristic: collected by

text: USA:NC

text: sediment stream

characteristic: isolation source

text: stream sediment:ENVO_00002127

characteristic: ontological term

text: Salmonella enterica

characteristic: organism

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: environmental

characteristic: source type

text: Pathogen: environmental/food/other sample from Salmonella enterica

characteristic: title


text: seeded vegetables (solanaceous)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: FDA

characteristic: collection date

text: USA:NC

characteristic: geo loc name

text: tomato

text: tomato (whole, raw):FOODON_03309927

text: Salmonella enterica

text: GenomeTrakr

text: food


characteristic: External Id

text: environmental-water

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: HI

characteristic: collected by

text: USA:HI

text: sewage

text: Hadar

characteristic: serovar

text: environmental

characteristic: strain

text: enterica

characteristic: sub species

text: Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica serovar Hadar


text: environmental-water

text: live

text: Pathogen.env

text: environmental/food/other

text: HI

text: USA:HI

text: sewage

characteristic: isolation source

characteristic: ontological term

text: Salmonella enterica subsp. enterica serovar Hadar

characteristic: organism

text: Hadar

text: environmental

characteristic: source type

text: enterica

characteristic: title


text: environmental-water

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: HI

text: USA:HI

text: sewage

text: Salmonella enterica

text: Hadar

text: environmental


characteristic: External Id

text: environmental-water

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: HI

characteristic: collection date

text: USA:HI

characteristic: geo loc name

text: sewage

text: Muenster

text: environmental

text: enterica

text: Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica serovar Muenster


text: environmental-water

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: HI

characteristic: collected by

text: USA:HI

text: sewage

text: Salmonella enterica subsp. enterica serovar Muenster

text: Muenster

characteristic: serovar

text: environmental

characteristic: strain

text: enterica


text: Norwich Medical School, University of East Anglia

text: live

text: Generic

text: Homo sapiens

characteristic: organism

text: cartilage

text: cartilage

characteristic: tissue

text: normal

characteristic: tissue type


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: grade

text: Homo sapiens

text: chondrosarcoma

text: chondrosarcoma

characteristic: title


characteristic: External Id

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Homo sapiens

text: chondrosarcoma

text: chondrosarcoma

text: clear cell


text: Bioinformatics, The Babraham Institute

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: background strain

text: Primordial germ cell (PGC)

characteristic: cell type

text: Wild-type

characteristic: genotype

text: Mus musculus

text: Primordial germ cell (PGC)


text: Bioinformatics, The Babraham Institute

text: live

text: Generic

characteristic: SRA accession

text: Embryonic stem cell (ESC)

text: Wild-type

text: Mus musculus

text: Embryonic stem cell (ESC)


text: meat| chicken

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

text: environmental/food/other

text: SHL

characteristic: collected by

characteristic: collection date

text: USA:IA

characteristic: geo loc name

text: broiler carcass

characteristic: isolation source

text: broiler or fryer chicken:FOODON_03411198, carcass:UBERON_0008979

characteristic: ontological term

text: Salmonella enterica

characteristic: organism

text: animal

characteristic: source type

characteristic: strain


TMW 2.1619

characteristic: External Id

text: Technische Universitaet Muenchen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Germany

text: meat

text: Leuconostoc gasicomitatum

text: cell culture

characteristic: sample type

text: TMW 2.1619

text: Microbe sample from Leuconostoc gasicomitatum

characteristic: title


text: seeded vegetables (legumes), sprouts

characteristic: IFSAC Category

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: FDA

characteristic: fda lab id

text: USA:FL

text: alfalfa sprout

text: alfalfa sprout:FOODON_00002670

text: Salmonella enterica

text: GenomeTrakr

characteristic: project name

text: United States Food and Drug Administration|Office of Regulatory Affairs|Arkansas Laboratory

characteristic: sequenced by

text: Cubana

characteristic: serovar

text: food


text: live

text: Pathogen.env

text: environmental/food/other

text: FDA

characteristic: collected by

characteristic: collection date

text: Mexico

characteristic: geo loc name

text: Cantaloupes

characteristic: isolation source

text: Salmonella enterica

characteristic: organism

text: GenomeTrakr

text: Javiana


characteristic: External Id

text: herbs

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA

text: USA:IL

text: ground thyme steam treated

text: thyme (ground):FOODON_03301489

characteristic: ontological term

text: Salmonella enterica

text: GenomeTrakr

text: miami

text: food

characteristic: source type

characteristic: strain


text: multi-ingredient, seeds

characteristic: IFSAC Category

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: FDA

text: USA:ND

text: flax seed meal

text: flax vegetable food product:FOODON_00001860, meal (ready-to-consume):FOODON_03316468, seed:PO_0009010

text: Salmonella enterica

text: GenomeTrakr

text: Typhimurium

text: food

characteristic: title


text: grains

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: FDA

characteristic: fda lab id

text: USA:TX

text: coarse rice bran

text: rice bran:FOODON_03306185

text: Salmonella enterica

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: Cannstatt

characteristic: serovar

text: food


text: veterinary clinical/research| cow

characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FLUFL

characteristic: collected by

characteristic: collection date

text: USA:FL

characteristic: geo loc name

text: Bos taurus

characteristic: host

text: feces (Bos taurus)

characteristic: isolation source

text: bos taurus:ncbitaxon_9913| feces:uberon_0001988

text: Escherichia coli

characteristic: organism

text: animal

text: Pathogen: environmental/food/other sample from Escherichia coli


characteristic: External Id

text: veterinary clinical/research| cow

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: FLUFL

text: USA:FL

text: Bos taurus

text: feces (Bos taurus)

text: bos taurus:NCBITAXON_9913| feces:UBERON_0001988

characteristic: ontological term

text: Escherichia coli

text: animal

characteristic: source type

characteristic: strain


text: veterinary clinical/research| cow

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: FLUFL

text: USA:FL

text: feces (Bos taurus)

text: Escherichia coli

text: animal

characteristic: title


text: veterinary clinical/research| cow

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FLUFL

characteristic: collected by

characteristic: collection date

text: USA:FL

text: feces (Bos taurus)

text: Escherichia coli

text: animal


Sulcia-GWSS

text: University of Hawaii at Manoa

text: live

text: Microbe, viral or environmental

text: USA: Austin, TX

characteristic: geo loc name

text: Homalodisca vitripennis

characteristic: host

text: UT

characteristic: isolate

text: Candidatus Karelsulcia muelleri

characteristic: organism

text: whole organism

characteristic: sample type

text: GWSS

text: Microbe sample for Candidatus Sulcia muelleri


SAMBO ATCC 23877 T=48h

characteristic: External Id

text: National Research Council (CNR)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: France

text: soil

characteristic: isolation source

text: Streptomyces ambofaciens ATCC 23877

text: cell culture

text: ATCC 23877

text: Microbe sample from Streptomyces ambofaciens ATCC 23877

text: type strain of Streptomyces ambofaciens

characteristic: type material


SAMBO ATCC 23877 T=72h

text: National Research Council (CNR)

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: France

text: soil

text: Streptomyces ambofaciens ATCC 23877

text: cell culture

text: ATCC 23877

characteristic: strain

characteristic: title

text: type strain of Streptomyces ambofaciens


SAMBO ATCC 23877 T=96h

text: National Research Council (CNR)

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: France

text: soil

text: Streptomyces ambofaciens ATCC 23877

text: cell culture

text: ATCC 23877

text: type strain of Streptomyces ambofaciens


SAMBO ATCC 23877 T=120h

text: National Research Council (CNR)

text: live

text: Microbe, viral or environmental

text: France

characteristic: geo loc name

text: soil

text: Streptomyces ambofaciens ATCC 23877

text: cell culture

text: ATCC 23877

text: type strain of Streptomyces ambofaciens


RNAseq SAMBO ATCC 23877 T=120h

text: National Research Council (CNR)

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: France

text: soil

text: Streptomyces ambofaciens ATCC 23877

text: cell culture

text: ATCC 23877

text: RNA-seq S.Ambofaciens ATCC 23877 T=120h

text: type strain of Streptomyces ambofaciens


RNAseq SAMBO ATCC 23877 T=96h

text: National Research Council (CNR)

text: live

text: Microbe, viral or environmental

text: France

text: soil

text: Streptomyces ambofaciens ATCC 23877

characteristic: organism

text: cell culture

text: ATCC 23877

text: RNA-seq S.Ambofaciens ATCC 23877 T=96h

text: type strain of Streptomyces ambofaciens


RNAseq SAMBO ATCC 23877 T=72h

text: National Research Council (CNR)

text: live

text: Microbe, viral or environmental

text: France

text: soil

text: Streptomyces ambofaciens ATCC 23877

text: cell culture

characteristic: sample type

text: ATCC 23877

text: RNA-seq S.Ambofaciens ATCC 23877 T=72h

text: type strain of Streptomyces ambofaciens


RNAseq SAMBO ATCC 23877 T=48h

characteristic: External Id

text: National Research Council (CNR)

text: live

text: Microbe, viral or environmental

text: France

text: soil

text: Streptomyces ambofaciens ATCC 23877

text: cell culture

text: ATCC 23877

text: RNA-seq S.Ambofaciens ATCC 23877 T=48h

text: type strain of Streptomyces ambofaciens


text: meat

characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

text: Pathogen.env

text: environmental/food/other

text: FERA

characteristic: collected by

text: United Kingdom

text: retail meat

text: meat food product:FOODON_00001006

characteristic: ontological term

text: Campylobacter jejuni

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: food

characteristic: source type

text: Pathogen: environmental/food/other sample from Campylobacter jejuni


text: meat

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: FERA

text: United Kingdom

text: retail meat

characteristic: isolation source

text: meat food product:FOODON_00001006

text: Campylobacter coli

text: GenomeTrakr

text: food

text: Pathogen: environmental/food/other sample from Campylobacter coli


text: meat

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FERA

text: United Kingdom

characteristic: geo loc name

text: retail meat

text: meat food product:FOODON_00001006

text: Campylobacter sp. CFSAN038761

text: GenomeTrakr

text: food

characteristic: strain

text: Pathogen: environmental/food/other sample from Campylobacter sp. CFSAN038761

characteristic: title


characteristic: External Id

text: meat

characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

text: Pathogen.env

text: environmental/food/other

text: FERA

text: United Kingdom

text: retail meat

text: meat food product:FOODON_00001006

text: Campylobacter sp. CFSAN038759

characteristic: organism

text: GenomeTrakr

text: food

text: Pathogen: environmental/food/other sample from Campylobacter sp. CFSAN038759


text: meat

text: live

text: Pathogen.env

text: environmental/food/other

text: FERA

characteristic: collected by

text: United Kingdom

text: retail meat

text: meat food product:FOODON_00001006

characteristic: ontological term

text: Campylobacter sp. CFSAN038770

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: food

text: Pathogen: environmental/food/other sample from Campylobacter sp. CFSAN038770


text: University of Hawaii at Manoa

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: collection date

text: USA: Austin, Texas

text: Homalodisca vitripennis

characteristic: host

text: red bacteriome

characteristic: isolate

text: Austin, Texas

text: Candidatus Karelsulcia muelleri

characteristic: replicate

text: metatranscriptome - bacterial

characteristic: sample type

text: TX

text: Microbe sample from Candidatus Karelsulcia muelleri


text: dbGaP

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Bladder

characteristic: body site

text: HMB-MDS

text: Yes

characteristic: is tumor

text: Homo sapiens

text: male

characteristic: sex

text: Case Set

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Tumor DNA sample from Bladder of a human male participant in the dbGaP study Common Deleterious Germline Variants Shape the Urothelial Cancer Genome

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: DNA

text: Renal pelvis primary

text: HMB-MDS

text: Yes

text: Homo sapiens

characteristic: organism

text: male

text: Case Set

text: Tumor DNA sample from Renal pelvis primary of a human male participant in the dbGaP study Common Deleterious Germline Variants Shape the Urothelial Cancer Genome


text: dbGaP

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

text: Bladder

text: HMB-MDS

text: Yes

text: Homo sapiens

text: female

text: Case Set

text: Tumor DNA sample from Bladder of a human female participant in the dbGaP study Common Deleterious Germline Variants Shape the Urothelial Cancer Genome


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: biospecimen repository sample id

text: Peritoneal mass

characteristic: body site

text: HMB-MDS

text: Yes

characteristic: is tumor

text: Homo sapiens

text: male

characteristic: sex

text: Case Set

characteristic: study design

characteristic: study name

text: Tumor DNA sample from Peritoneal mass of a human male participant in the dbGaP study Common Deleterious Germline Variants Shape the Urothelial Cancer Genome


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

text: DNA

text: Bladder

text: HMB-MDS

text: Yes

text: Homo sapiens

text: female

text: Case Set

text: Common Deleterious Germline Variants Shape the Urothelial Cancer Genome

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

characteristic: title


text: dbGaP

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: DNA

text: Liver metasatsis

text: HMB-MDS

text: Yes

text: Homo sapiens

characteristic: organism

text: female

text: Case Set

text: Tumor DNA sample from Liver metasatsis of a human female participant in the dbGaP study Common Deleterious Germline Variants Shape the Urothelial Cancer Genome


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Bladder

characteristic: body site

text: HMB-MDS

text: Yes

text: Homo sapiens

text: male

text: Case Set


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

text: DNA

text: Ureter and kideny

text: HMB-MDS

text: Yes

characteristic: is tumor

text: Homo sapiens

text: female

characteristic: sex

text: Case Set

characteristic: study design

characteristic: study name

text: Tumor DNA sample from Ureter and kideny of a human female participant in the dbGaP study Common Deleterious Germline Variants Shape the Urothelial Cancer Genome


text: dbGaP

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: DNA

text: Renal pelvis primary

text: HMB-MDS

text: Yes

text: Homo sapiens

text: male

text: Case Set

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

characteristic: title


text: dbGaP

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

text: Lung nodule

text: HMB-MDS

text: Yes

text: Homo sapiens

characteristic: organism

text: male

text: Case Set

text: Tumor DNA sample from Lung nodule of a human male participant in the dbGaP study Common Deleterious Germline Variants Shape the Urothelial Cancer Genome


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: LN from cystetcomy LND

characteristic: body site

text: HMB-MDS

text: Yes

text: Homo sapiens

text: male

text: Case Set

text: Tumor DNA sample from LN from cystetcomy LND of a human male participant in the dbGaP study Common Deleterious Germline Variants Shape the Urothelial Cancer Genome


text: dbGaP

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: DNA

text: Spinal mass

text: HMB-MDS

text: Yes

characteristic: is tumor

text: Homo sapiens

text: female

characteristic: sex

text: Case Set

characteristic: study design

characteristic: study name

text: Tumor DNA sample from Spinal mass of a human female participant in the dbGaP study Common Deleterious Germline Variants Shape the Urothelial Cancer Genome


text: dbGaP

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: DNA

text: Right supra-clavicular LN

text: HMB-MDS

text: Yes

text: Homo sapiens

text: male

text: Case Set

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Tumor DNA sample from Right supra-clavicular LN of a human male participant in the dbGaP study Common Deleterious Germline Variants Shape the Urothelial Cancer Genome

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

text: Liver metasatsis

text: HMB-MDS

text: Yes

text: Homo sapiens

characteristic: organism

text: male

text: Case Set

text: Tumor DNA sample from Liver metasatsis of a human male participant in the dbGaP study Common Deleterious Germline Variants Shape the Urothelial Cancer Genome


text: dbGaP

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Presacral mass

characteristic: body site

text: HMB-MDS

text: Yes

text: Homo sapiens

text: male

text: Case Set

text: Tumor DNA sample from Presacral mass of a human male participant in the dbGaP study Common Deleterious Germline Variants Shape the Urothelial Cancer Genome


text: dbGaP

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: DNA

text: Lung nodule

text: HMB-MDS

text: Yes

characteristic: is tumor

text: Homo sapiens

text: female

characteristic: sex

text: Case Set

characteristic: study design

characteristic: study name

text: Tumor DNA sample from Lung nodule of a human female participant in the dbGaP study Common Deleterious Germline Variants Shape the Urothelial Cancer Genome


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

text: DNA

text: Retroperitoneal LN

text: HMB-MDS

text: Yes

text: Homo sapiens

text: male

text: Case Set

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Tumor DNA sample from Retroperitoneal LN of a human male participant in the dbGaP study Common Deleterious Germline Variants Shape the Urothelial Cancer Genome

characteristic: title


text: dbGaP

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

text: Normal Liver

text: HMB-MDS

text: No

text: SNV (.MAF)

characteristic: molecular data type

text: Homo sapiens

characteristic: organism

text: male

text: Case Set

text: Non-tumor DNA sample from Normal Liver of a human male participant in the dbGaP study Common Deleterious Germline Variants Shape the Urothelial Cancer Genome


text: dbGaP

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Buccal swab

characteristic: body site

text: HMB-MDS

text: No

characteristic: is tumor

text: Homo sapiens

text: male

text: Case Set

text: Non-tumor DNA sample from Buccal swab of a human male participant in the dbGaP study Common Deleterious Germline Variants Shape the Urothelial Cancer Genome


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

text: DNA

text: Right pelvic mass

text: HMB-MDS

text: Yes

text: Homo sapiens

text: male

characteristic: sex

text: Case Set

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

text: Tumor DNA sample from Right pelvic mass of a human male participant in the dbGaP study Common Deleterious Germline Variants Shape the Urothelial Cancer Genome


text: dbGaP

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

text: LN from cystetcomy LND

text: HMB-MDS

text: Yes

text: Homo sapiens

text: female

text: Case Set

characteristic: submitter handle

text: Tumor DNA sample from LN from cystetcomy LND of a human female participant in the dbGaP study Common Deleterious Germline Variants Shape the Urothelial Cancer Genome

characteristic: title


text: dbGaP

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Para-aortic LN

text: HMB-MDS

text: Yes

text: Homo sapiens

characteristic: organism

text: male

text: Case Set

text: Tumor DNA sample from Para-aortic LN of a human male participant in the dbGaP study Common Deleterious Germline Variants Shape the Urothelial Cancer Genome


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

text: DNA

text: Left Inguinal LN

characteristic: body site

text: HMB-MDS

text: Yes

characteristic: is tumor

text: Homo sapiens

text: male

characteristic: sex

text: Case Set

characteristic: study design

text: Tumor DNA sample from Left Inguinal LN of a human male participant in the dbGaP study Common Deleterious Germline Variants Shape the Urothelial Cancer Genome


text: dbGaP

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission model

text: DNA

text: Prostate bed

text: HMB-MDS

text: Yes

text: Homo sapiens

text: male

text: Case Set

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

text: Tumor DNA sample from Prostate bed of a human male participant in the dbGaP study Common Deleterious Germline Variants Shape the Urothelial Cancer Genome


text: dbGaP

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

text: Inguinal LN

text: HMB-MDS

text: Yes

text: Homo sapiens

text: female

text: Case Set

characteristic: submitter handle

text: Tumor DNA sample from Inguinal LN of a human female participant in the dbGaP study Common Deleterious Germline Variants Shape the Urothelial Cancer Genome

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Renal pelvis primary

text: HMB-MDS

text: Yes

text: Homo sapiens

characteristic: organism

text: female

text: Case Set

text: Tumor DNA sample from Renal pelvis primary of a human female participant in the dbGaP study Common Deleterious Germline Variants Shape the Urothelial Cancer Genome


text: cow

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: ADRDL, SDSU

characteristic: collected by

characteristic: collection date

text: USA:SD

characteristic: geo loc name

text: CFSAN055545 ;16-7018

text: liver (Bos taurus)

characteristic: isolation source

text: bos taurus:NCBITAXON_9913, liver:UBERON_0002107

characteristic: ontological term

text: Salmonella enterica

text: Dublin

characteristic: serovar

text: animal

characteristic: source type

characteristic: strain

text: Pathogen: environmental/food/other sample from Salmonella enterica


characteristic: External Id

text: veterinary clinical/research, pig

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: ADRDL, SDSU

text: USA:MN

text: CFSAN055579 ;16-14584

text: fecal swab (Sus scrofa domesticus)

text: feces:UBERON_0001988, sus scrofa domesticus:NCBITAXON_9825, swab:NCIT_C17627

text: Salmonella enterica

text: I 4,5,12:i:-

text: animal

characteristic: title


text: veterinary clinical/research, cow

characteristic: INSDC center name

text: live

text: Pathogen.env

text: environmental/food/other

text: ADRDL, SDSU

text: USA:IA

text: CFSAN055578 ;16-14502

text: lymph node (Bos taurus)

text: bos taurus:NCBITAXON_9913, lymph node:UBERON_0000029

text: Salmonella enterica

characteristic: organism

text: Uganda

text: animal


text: veterinary clinical/research, pig

characteristic: IFSAC+ Category

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: ADRDL, SDSU

text: USA:SD

text: CFSAN055577 ;16-14454

text: pool tissue (Sus scrofa domesticus)

text: pool water:GENEPIO_0001014, sus scrofa domesticus:NCBITAXON_9825, tissue:UBERON_0000479

text: Salmonella enterica

text: derby

text: animal


text: veterinary clinical/research, chicken

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: ADRDL, SDSU

characteristic: collected by

text: USA:IA

text: CFSAN055576 ;16-14388

text: intestine (Gallus gallus domesticus)

text: chicken:FOODON_03411457, intestine:UBERON_0000160

text: Salmonella enterica

text: Infantis

text: animal


text: veterinary clinical/research, pig

text: live

text: Pathogen.env

text: environmental/food/other

text: ADRDL, SDSU

characteristic: collection date

text: USA:MN

characteristic: geo loc name

text: CFSAN055575 ;16-14379

text: intestine (Sus scrofa domesticus)

text: intestine:UBERON_0000160, sus scrofa domesticus:NCBITAXON_9825

text: Salmonella enterica

text: I 4,5,12:i:-

text: animal


text: veterinary clinical/research, cow

text: live

text: Pathogen.env

text: environmental/food/other

text: ADRDL, SDSU

text: USA:MN

text: CFSAN055574 ;16-14334

text: kidney (Bos taurus)

characteristic: isolation source

text: bos taurus:NCBITAXON_9913, kidney:UBERON_0002113

characteristic: ontological term

text: Salmonella enterica

text: Infantis

text: animal


text: veterinary clinical/research, other animal

text: live

text: Pathogen.env

text: environmental/food/other

text: ADRDL, SDSU

text: USA:SD

text: CFSAN055573 ;16-14326

text: intestine (Phasianus colchicus)

text: intestine:UBERON_0000160, phasianus colchicus:NCBITAXON_9054

text: Salmonella enterica

text: Agona

characteristic: serovar

text: animal

characteristic: source type


characteristic: External Id

text: veterinary clinical/research, pig

text: live

text: Pathogen.env

text: environmental/food/other

text: ADRDL, SDSU

text: USA:SD

text: CFSAN055572 ;16-13965

text: intestine (Sus scrofa domesticus)

text: Salmonella enterica

text: Infantis

text: animal

characteristic: strain


text: turkey

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: ADRDL, SDSU

text: USA:SD

text: CFSAN055571 ;16-13682

text: liver (Meleagris gallopavo)

text: liver:UBERON_0002107, meleagris gallopavo:NCBITAXON_9103

text: Salmonella enterica

text: muenchen

text: animal


text: veterinary clinical/research, pig

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: ADRDL, SDSU

text: USA:MN

text: CFSAN055569 ;16-13502

text: feces (Sus scrofa domesticus)

text: feces:UBERON_0001988, sus scrofa domesticus:NCBITAXON_9825

text: Salmonella enterica

text: I 4,5,12:i:-

text: animal

characteristic: title


text: veterinary clinical/research, pig

characteristic: INSDC center name

text: live

text: Pathogen.env

text: environmental/food/other

text: ADRDL, SDSU

text: USA:MN

text: CFSAN055559 ;16-11829

text: pooled intestine (Sus scrofa domesticus)

text: intestine:UBERON_0000160, pooled sample:NCIT_C45910, sus scrofa domesticus:NCBITAXON_9825

text: Salmonella enterica

characteristic: organism

text: Adelaide

text: animal


text: clinical/research| human

characteristic: IFSAC+ Category

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: SRA accession

text: clinical/host-associated

text: FLUFL

text: USA:FL

text: Homo sapiens

characteristic: host

text: feces

text: Escherichia coli

text: human

text: Pathogen: clinical or host-associated sample from Escherichia coli


text: veterinary clinical/research| cow

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: FLUFL

characteristic: collected by

characteristic: collection date

text: USA:FL

characteristic: geo loc name

text: Bos taurus

text: feces (Bos taurus)

characteristic: isolation source

text: bos taurus:ncbitaxon_9913| feces:uberon_0001988

text: Escherichia coli

text: animal

text: Pathogen: environmental/food/other sample from Escherichia coli


characteristic: External Id

text: veterinary clinical/research| cow

text: FDA Center for Food Safety and Applied Nutrition

text: live

text: Pathogen.env

text: environmental/food/other

text: FLUFL

text: USA:FL

text: Bos taurus

text: feces (Bos taurus)

text: bos taurus:NCBITAXON_9913| feces:UBERON_0001988

characteristic: ontological term

text: Escherichia coli

text: animal

characteristic: source type

characteristic: strain


PstutBN

text: TU Delft

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.miscellaneous

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: laboratory

characteristic: env biome

text: lab-scale bioreactor

characteristic: env feature

text: culture medium

text: Netherlands: Utrecht

text: lab-scale bioreactor anaerobically degrading benzene with nitrate as electron acceptor

text: 52.083333 N 5.11666700 E

characteristic: lat lon

text: Stutzerimonas stutzeri

text: BN

text: Pseudomonas stutzeri BN

characteristic: title


K. hansenii LMG 23726T

text: University of Texas at Austin

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: India: West Bangal

text: Kombucha tea

text: Novacetimonas hansenii

characteristic: organism

text: Whole organism

characteristic: sample type

text: LMG 23726

text: Microbe sample from Novacetimonas hansenii

text: type strain of Gluconacetobacter kombuchae

characteristic: type material


K. hansenii strain HUM-1

characteristic: External Id

text: University of Texas at Austin

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: USA: Austin, Texas

characteristic: geo loc name

text: Hummingbird feeder

characteristic: isolation source

text: Novacetimonas hansenii

text: Whole organism


K. hansenii strain SC-3B

text: University of Texas at Austin

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: USA: Austin, Texas

text: Kombucha tea

text: Novacetimonas hansenii

text: Whole organism

characteristic: strain


text: environmental

characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: Nova

characteristic: collected by

text: USA:FL

text: soil

characteristic: ontological term

text: Salmonella enterica

text: environmental

characteristic: source type

text: Pathogen: environmental/food/other sample from Salmonella enterica


text: environmental-water

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: Nova

text: USA:FL

text: water

text: Salmonella enterica

characteristic: organism

text: environmental

characteristic: title


characteristic: External Id

text: environmental

text: live

text: Pathogen.env

text: environmental/food/other

text: Nova

characteristic: collection date

text: USA:FL

characteristic: geo loc name

text: soil

text: Salmonella enterica

text: environmental


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Blood

characteristic: body site

text: HMB-PUB-MDS

text: No

characteristic: is tumor

text: SNP Genotypes (Array)

characteristic: molecular data type

text: Homo sapiens

text: female

characteristic: sex

text: Case-Control

characteristic: study design

text: Head and Neck Neoplasms

characteristic: study disease

text: OncoArray: Oral and Pharynx Cancer

characteristic: study name

text: Yes

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Non-tumor DNA sample from Blood of a human female participant in the dbGaP study OncoArray: Oral and Pharynx Cancer


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission package

text: DNA

text: Blood

text: DS-CA-PUB-MDS

text: No

text: SNP Genotypes (Array)

text: Homo sapiens

characteristic: organism

text: male

text: Case-Control

text: Head and Neck Neoplasms

text: OncoArray: Oral and Pharynx Cancer

text: Yes

text: Non-tumor DNA sample from Blood of a human male participant in the dbGaP study OncoArray: Oral and Pharynx Cancer

characteristic: title


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Blood

characteristic: body site

text: HMB-PUB-MDS

text: No

characteristic: is tumor

text: SNP Genotypes (Array)

text: Homo sapiens

text: male

text: Case-Control

text: Head and Neck Neoplasms

text: OncoArray: Oral and Pharynx Cancer

text: Yes


text: dbGaP

text: live

text: Generic

text: DNA

text: Buccal

text: HMB-PUB-MDS

text: No

text: SNP Genotypes (Array)

characteristic: molecular data type

text: Homo sapiens

text: male

characteristic: sex

text: Case-Control

characteristic: study design

text: Head and Neck Neoplasms

characteristic: study disease

text: OncoArray: Oral and Pharynx Cancer

characteristic: study name

text: Yes

characteristic: subject is affected

characteristic: submitted sample id

text: Non-tumor DNA sample from Buccal of a human male participant in the dbGaP study OncoArray: Oral and Pharynx Cancer


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission package

text: DNA

text: Blood

text: DS-CA-PUB-MDS

text: No

text: SNP Genotypes (Array)

text: Homo sapiens

text: female

text: Case-Control

text: Head and Neck Neoplasms

text: OncoArray: Oral and Pharynx Cancer

text: Yes

characteristic: submitted subject id

characteristic: submitter handle


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Buccal

text: HMB-PUB-MDS

text: No

text: SNP Genotypes (Array)

text: Homo sapiens

characteristic: organism

text: female

text: Case-Control

text: Head and Neck Neoplasms

text: OncoArray: Oral and Pharynx Cancer

text: Yes

text: Non-tumor DNA sample from Buccal of a human female participant in the dbGaP study OncoArray: Oral and Pharynx Cancer

characteristic: title


text: dbGaP

text: live

text: Generic

text: SNP Genotypes (Array)

characteristic: molecular data type

text: Homo sapiens

text: female

characteristic: sex

text: Case-Control

characteristic: study design

text: OncoArray: Oral and Pharynx Cancer

characteristic: study name

text: Sample from a human female participant in the dbGaP study OncoArray: Oral and Pharynx Cancer