characteristic: External Id

text: UC Berkeley

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

characteristic: SRA accession

text: Late log phase

text: Komeili Lab, UC Berkeley

text: Frameshift at position 217

text: Solidesulfovibrio magneticus RS-1

text: Rare Cmag and Particles

text: Whole Cell

text: type strain of Desulfovibrio magneticus


status: PUBLIC

text: UC Berkeley

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Late log phase

tag: attribute

characteristic: age

text: Komeili Lab, UC Berkeley

characteristic: biomaterial provider

text: Premature stop at position 425

characteristic: description

characteristic: genotype

text: Solidesulfovibrio magneticus RS-1

characteristic: organism

text: Rare Cmag and Particles

characteristic: phenotype

characteristic: strain

text: Whole Cell

characteristic: tissue

text: Model organism or animal sample from Solidesulfovibrio magneticus RS-1

characteristic: title

text: type strain of Desulfovibrio magneticus

characteristic: type material


characteristic: External Id

text: UC Berkeley

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

characteristic: SRA accession

text: Late log phase

text: Komeili Lab, UC Berkeley

text: Solidesulfovibrio magneticus RS-1

text: Rare Cmag and Particles

text: Whole Cell

text: type strain of Desulfovibrio magneticus


text: UC Berkeley

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Model organism or animal

text: Late log phase

text: Komeili Lab, UC Berkeley

text: Solidesulfovibrio magneticus RS-1

text: Rare Cmag

text: Whole Cell

text: type strain of Desulfovibrio magneticus


text: UC Berkeley

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Late log phase

text: Komeili Lab, UC Berkeley

text: Solidesulfovibrio magneticus RS-1

text: Rare Cmag

text: Whole Cell

text: type strain of Desulfovibrio magneticus


text: UC Berkeley

text: live

text: Model organism or animal

text: Late log phase

characteristic: age

text: Komeili Lab, UC Berkeley

characteristic: biomaterial provider

text: Premature stop at position 177

characteristic: description

text: Solidesulfovibrio magneticus RS-1

text: Low Cmag and rare particles

text: Whole Cell

text: type strain of Desulfovibrio magneticus


text: UC Berkeley

text: live

text: Model organism or animal

text: Late log phase

text: Komeili Lab, UC Berkeley

characteristic: genotype

text: Solidesulfovibrio magneticus RS-1

characteristic: organism

text: Low Cmag and rare particles

characteristic: phenotype

text: Whole Cell

text: type strain of Desulfovibrio magneticus


text: UC Berkeley

text: live

text: Model organism or animal

text: Late log phase

text: Komeili Lab, UC Berkeley

text: Premature stop at position 418

text: Solidesulfovibrio magneticus RS-1

text: Non, magnetic, rare round-shaped particles

characteristic: strain

text: Whole Cell

characteristic: tissue

characteristic: title

text: type strain of Desulfovibrio magneticus


characteristic: External Id

text: UC Berkeley

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

text: Late log phase

text: Komeili Lab, UC Berkeley

text: Frameshift at position 270

text: Solidesulfovibrio magneticus RS-1

text: Low Cmag and rare particles

text: Whole Cell

text: type strain of Desulfovibrio magneticus

characteristic: type material


text: UC Berkeley

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Model organism or animal

characteristic: SRA accession

text: Late log phase

text: Komeili Lab, UC Berkeley

text: Transposon insertion

text: Solidesulfovibrio magneticus RS-1

text: Non-magnetic, no particles

text: Whole Cell

text: type strain of Desulfovibrio magneticus


text: UC Berkeley

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

text: Late log phase

text: Komeili Lab, UC Berkeley

text: Solidesulfovibrio magneticus RS-1

text: Non-magnetic, no particles

text: Whole Cell

text: type strain of Desulfovibrio magneticus


text: UC Berkeley

text: live

text: Model organism or animal

characteristic: NCBI submission package

text: Late log phase

characteristic: age

text: Komeili Lab, UC Berkeley

characteristic: biomaterial provider

text: Premature stop at position 153

text: Solidesulfovibrio magneticus RS-1

text: Non-magnetic, no particles

text: Whole Cell

text: type strain of Desulfovibrio magneticus


text: UC Berkeley

text: live

text: Model organism or animal

text: Late log phase

text: Komeili Lab, UC Berkeley

text: Premature stop at position 37

characteristic: description

characteristic: genotype

text: Solidesulfovibrio magneticus RS-1

characteristic: organism

text: Non-magnetic, rare misshaped particles

text: Whole Cell

text: type strain of Desulfovibrio magneticus


text: UC Berkeley

text: live

text: Model organism or animal

text: Late log phase

text: Komeili Lab, UC Berkeley

text: Solidesulfovibrio magneticus RS-1

text: Non-magnetic, rare misshaped particles

characteristic: phenotype

characteristic: strain

text: Whole Cell

characteristic: tissue

text: type strain of Desulfovibrio magneticus


characteristic: External Id

text: UC Berkeley

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

text: Late log phase

text: Komeili Lab, UC Berkeley

text: Premature stop at position 65

text: Solidesulfovibrio magneticus RS-1

text: Non-magnetic, no particles

text: Whole Cell

characteristic: title

text: type strain of Desulfovibrio magneticus


text: UC Berkeley

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Model organism or animal

text: Late log phase

text: Komeili Lab, UC Berkeley

text: Premature stop at position 226

text: Solidesulfovibrio magneticus RS-1

text: Non-magnetic, no particles

text: Whole Cell

text: type strain of Desulfovibrio magneticus

characteristic: type material


Deletion 1

text: UC Berkeley

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: SRA accession

text: Late log phase

text: Komeili Lab, UC Berkeley

text: Missing Group I from mamM to mamI1

text: Deletion 1

text: Solidesulfovibrio magneticus RS-1

text: Non-magnetic, no particles

text: Whole Cell

text: type strain of Desulfovibrio magneticus


Deletion 2

text: UC Berkeley

text: live

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Late log phase

characteristic: age

text: Komeili Lab, UC Berkeley

text: Missing All but last gene in group II

text: Deletion 2

text: Solidesulfovibrio magneticus RS-1

text: Non-magnetic, no particles

text: Whole Cell

text: type strain of Desulfovibrio magneticus


Deletion 3

text: UC Berkeley

text: live

text: Model organism or animal

text: Late log phase

text: Komeili Lab, UC Berkeley

characteristic: biomaterial provider

text: Missing Groups II-IV

characteristic: description

text: Deletion 3

characteristic: genotype

text: Solidesulfovibrio magneticus RS-1

text: Non-magnetic, no particles

text: Whole Cell

text: type strain of Desulfovibrio magneticus


MAI

text: UC Berkeley

text: live

text: Model organism or animal

text: Late log phase

text: Komeili Lab, UC Berkeley

text: Missing Magnetosome Island

text: MAI

text: Solidesulfovibrio magneticus RS-1

characteristic: organism

text: Non-magnetic, no particles

characteristic: phenotype

characteristic: strain

text: Whole Cell

text: type strain of Desulfovibrio magneticus


DSM 1735

characteristic: External Id

text: Cornell University

text: live

text: Microbe, viral or environmental

text: DMSZ

text: L.DS. Smith

characteristic: collected by

characteristic: collection date

text: Type strain of Paenibacillus durus, a bacterial species isolated from marine sediment in the Black Sea.

text: marine sediment

characteristic: isolation source

text: Paenibacillus durus

text: DSM 1735

text: Microbe sample from Paenibacillus durus

text: type strain of Clostridium durum


text: Institute for Stem Cell and Regenerative Medicine

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Generic

text: H1 embryonic stem cell

characteristic: cell line

text: Homo sapiens

text: primed

characteristic: pluripotency state

text: embryonic stem cell

text: H1 mRNA rep 1

characteristic: title


FDA831662 58-1_B

text: environmental

characteristic: IFSAC+ Category

text: FDA/CFSAN

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: FDA

text: 831662 58-1

characteristic: fda lab id

text: USA:IL

characteristic: geo loc name

text: environmental swab

text: environmental (swab or sampling):GENEPIO_0001732

characteristic: ontological term

text: Listeria monocytogenes

characteristic: pfge primary enzyme pattern

text: GenomeTrakr

characteristic: project name

text: United States Food and Drug Administration|Office of Regulatory Affairs|Arkansas Laboratory

characteristic: sequenced by

text: environmental

characteristic: source type

text: FDA831662 58-1

text: Pathogen: environmental/food/other sample from Listeria monocytogenes


FDA831662 64-1_C

characteristic: External Id

text: environmental

text: FDA/CFSAN

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: FDA

characteristic: collected by

characteristic: collection date

text: 831662 64-1

text: USA:IL

text: environmental swab

characteristic: isolation source

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

text: environmental

text: FDA831662 64-1

characteristic: strain


FDA831662 65-1_C

text: environmental

characteristic: IFSAC+ Category

text: FDA/CFSAN

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: FDA

text: 831662 65-1

text: USA:IL

text: environmental swab

text: Listeria monocytogenes

text: GenomeTrakr

text: environmental

text: FDA831662 65-1

characteristic: title


FDA831662 72-1_C

text: environmental

text: FDA/CFSAN

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: FDA

text: 831662 72-1

characteristic: fda lab id

text: USA:IL

characteristic: geo loc name

text: environmental swab

characteristic: ontological term

text: Listeria monocytogenes

characteristic: pfge primary enzyme pattern

text: GenomeTrakr

text: environmental

text: FDA831662 72-1


characteristic: External Id

text: FDA/CFSAN

characteristic: INSDC center name

text: live

text: Pathogen.env

text: FDA

text: USA:IL

text: egg white salad w/ chives

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by


FDA868553 C16-20 4

text: sub-tropical fruit

characteristic: IFSAC Category

text: FDA/CFSAN

characteristic: INSDC first public

text: live

text: Pathogen.env

text: FDA

characteristic: collected by

characteristic: collection date

text: 868553 C16-20 4

text: Mexico

text: fresh hass avocado

characteristic: isolation source

text: food (fresh):FOODON_00002457, hass avocado:FOODON_00002982

text: Listeria monocytogenes

text: food

characteristic: source type

text: FDA868553 C16-20 4


FDA868576 C11-15 3

text: sub-tropical fruit

text: FDA/CFSAN

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: FDA

text: 868576 C11-15 3

text: Mexico

text: fresh avocado

text: food (fresh):FOODON_00002457, avocado (whole, raw):FOODON_03305236

text: Listeria monocytogenes

characteristic: organism

text: food

text: FDA868576 C11-15 3

characteristic: strain


FDA868831 C11-15 3

text: sub-tropical fruit

text: FDA/CFSAN

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: FDA

text: 868831 C11-15 3

characteristic: fda lab id

text: Mexico

characteristic: geo loc name

text: fresh hass avocado

characteristic: ontological term

text: Listeria monocytogenes

text: food

text: FDA868831 C11-15 3

characteristic: title


FDA868831 C4-B

characteristic: External Id

text: sub-tropical fruit

text: FDA/CFSAN

characteristic: INSDC center name

text: live

text: Pathogen.env

text: FDA

text: 868831 C4-B

text: Mexico

text: fresh hass avocado

text: Listeria monocytogenes

text: food

text: FDA868831 C4-B


FDA868831 S11-D

text: sub-tropical fruit

characteristic: IFSAC Category

text: FDA/CFSAN

characteristic: INSDC first public

text: live

text: Pathogen.env

text: FDA

text: 868831 S11-D

text: Mexico

text: fresh hass avocado

text: Listeria monocytogenes

characteristic: pfge primary enzyme pattern

text: food

text: FDA868831 S11-D


FDA868831 S12-E

text: sub-tropical fruit

text: FDA/CFSAN

text: live

text: Pathogen.env

text: FDA

characteristic: collected by

characteristic: collection date

text: 868831 S12-E

text: Mexico

text: fresh hass avocado

characteristic: isolation source

text: Listeria monocytogenes

text: food

text: FDA868831 S12-E


FDA868831 S13-E

text: sub-tropical fruit

text: FDA/CFSAN

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: FDA

text: 868831 S13-E

text: Mexico

text: fresh hass avocado

text: Listeria monocytogenes

text: food

characteristic: source type

text: FDA868831 S13-E


FDA868831 S14-D

text: sub-tropical fruit

text: FDA/CFSAN

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: FDA

text: 868831 S14-D

text: Mexico

text: fresh hass avocado

text: Listeria monocytogenes

characteristic: organism

text: food

text: FDA868831 S14-D

characteristic: strain


FDA868831 S15-D

text: sub-tropical fruit

text: FDA/CFSAN

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: FDA

text: 868831 S15-D

characteristic: fda lab id

text: Mexico

characteristic: geo loc name

text: fresh hass avocado

text: Listeria monocytogenes

text: food

text: FDA868831 S15-D


FDA868831 S16-D

characteristic: External Id

text: sub-tropical fruit

text: FDA/CFSAN

text: live

text: Pathogen.env

text: FDA

text: 868831 S16-D

text: Mexico

text: fresh hass avocado

characteristic: ontological term

text: Listeria monocytogenes

text: food

text: FDA868831 S16-D

characteristic: title


FDA868831 S17-E

text: sub-tropical fruit

characteristic: IFSAC Category

text: FDA/CFSAN

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: FDA

text: 868831 S17-E

text: Mexico

text: fresh hass avocado

text: Listeria monocytogenes

text: food

text: FDA868831 S17-E


FDA868831 S18-D

text: sub-tropical fruit

text: FDA/CFSAN

text: live

text: Pathogen.env

text: FDA

characteristic: collected by

characteristic: collection date

text: 868831 S18-D

text: Mexico

text: fresh hass avocado

text: Listeria monocytogenes

characteristic: pfge primary enzyme pattern

text: food

text: FDA868831 S18-D


FDA868831 S19-B

text: sub-tropical fruit

text: FDA/CFSAN

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: FDA

text: 868831 S19-B

text: Mexico

text: fresh hass avocado

characteristic: isolation source

text: Listeria monocytogenes

text: food

text: FDA868831 S19-B


FDA868831 S19-C

text: sub-tropical fruit

text: FDA/CFSAN

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: FDA

text: 868831 S19-C

text: Mexico

text: fresh hass avocado

text: Listeria monocytogenes

characteristic: organism

text: food

characteristic: source type

text: FDA868831 S19-C


FDA868831 S19-D

text: sub-tropical fruit

text: FDA/CFSAN

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: FDA

text: 868831 S19-D

characteristic: fda lab id

text: Mexico

text: fresh hass avocado

text: Listeria monocytogenes

text: food

text: FDA868831 S19-D

characteristic: strain


FDA868939 C16-20C

characteristic: External Id

text: sub-tropical fruit

text: FDA/CFSAN

text: live

text: Pathogen.env

text: FDA

text: 868939 C16-20C

text: Mexico

characteristic: geo loc name

text: fresh avocado

characteristic: ontological term

text: Listeria monocytogenes

text: food

text: FDA868939 C16-20C


FDA868939 C16-20E

text: sub-tropical fruit

characteristic: IFSAC Category

text: FDA/CFSAN

characteristic: INSDC center name

text: live

text: Pathogen.env

text: FDA

text: 868939 C16-20E

text: Mexico

text: fresh avocado

text: Listeria monocytogenes

text: food

text: FDA868939 C16-20E

characteristic: title


FDA868939 S18-B

text: sub-tropical fruit

text: FDA/CFSAN

characteristic: INSDC first public

text: live

text: Pathogen.env

text: FDA

characteristic: collected by

characteristic: collection date

text: 868939 S18-B

text: Mexico

text: fresh avocado

text: Listeria monocytogenes

text: food

text: FDA868939 S18-B


FDA869492 C11-15A

text: sub-tropical fruit

text: FDA/CFSAN

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: FDA

text: 869492 C11-15A

text: Mexico

text: fresh hass avocado

text: Listeria monocytogenes

characteristic: pfge primary enzyme pattern

text: food

text: FDA869492 C11-15A


FDA869492 C11-15B

text: sub-tropical fruit

text: FDA/CFSAN

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: FDA

text: 869492 C11-15B

text: Mexico

text: fresh hass avocado

characteristic: isolation source

text: Listeria monocytogenes

characteristic: organism

text: food

text: FDA869492 C11-15B


FDA869492 C16-20A

text: sub-tropical fruit

text: FDA/CFSAN

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: FDA

text: 869492 C16-20A

characteristic: fda lab id

text: Mexico

text: fresh hass avocado

text: Listeria monocytogenes

text: food

characteristic: source type

text: FDA869492 C16-20A


FDA869492 C16-20B

characteristic: External Id

text: sub-tropical fruit

text: FDA/CFSAN

text: live

text: Pathogen.env

text: FDA

text: 869492 C16-20B

text: Mexico

characteristic: geo loc name

text: fresh hass avocado

text: Listeria monocytogenes

text: food

text: FDA869492 C16-20B

characteristic: strain


FDA869492 S11-D

text: sub-tropical fruit

characteristic: IFSAC Category

text: FDA/CFSAN

characteristic: INSDC center name

text: live

text: Pathogen.env

text: FDA

text: 869492 S11-D

text: Mexico

text: fresh hass avocado

characteristic: ontological term

text: Listeria monocytogenes

text: food

text: FDA869492 S11-D


FDA869492 S14-D

text: sub-tropical fruit

text: FDA/CFSAN

characteristic: INSDC first public

text: live

text: Pathogen.env

text: FDA

characteristic: collected by

text: 869492 S14-D

text: Mexico

text: fresh hass avocado

text: Listeria monocytogenes

text: food

text: FDA869492 S14-D

characteristic: title


FDA869492 S15-E

text: sub-tropical fruit

text: FDA/CFSAN

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: FDA

characteristic: collection date

text: 869492 S15-E

text: Mexico

text: fresh hass avocado

text: Listeria monocytogenes

text: food

text: FDA869492 S15-E


FDA869492 S16-B

text: sub-tropical fruit

text: FDA/CFSAN

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: FDA

text: 869492 S16-B

text: Mexico

text: fresh hass avocado

characteristic: isolation source

text: Listeria monocytogenes

characteristic: pfge primary enzyme pattern

text: food

text: FDA869492 S16-B


FDA869492 S17-D

text: sub-tropical fruit

text: FDA/CFSAN

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: FDA

text: 869492 S17-D

characteristic: fda lab id

text: Mexico

text: fresh hass avocado

text: Listeria monocytogenes

characteristic: organism

text: food

text: FDA869492 S17-D


FDA869492 S19-A

characteristic: External Id

text: sub-tropical fruit

text: FDA/CFSAN

text: live

text: Pathogen.env

text: FDA

text: 869492 S19-A

text: Mexico

characteristic: geo loc name

text: fresh hass avocado

text: Listeria monocytogenes

text: food

characteristic: source type

text: FDA869492 S19-A


FDA865369 33-6

text: environmental

characteristic: IFSAC+ Category

text: FDA/CFSAN

characteristic: INSDC center name

text: live

text: Pathogen.env

text: FDA

text: 865369 33-6

text: USA:DE

text: environmental swab

text: Listeria monocytogenes

text: environmental

text: FDA865369 33-6

characteristic: strain


FDA835098 2-1

text: beans, sprouts

characteristic: IFSAC Category

text: FDA/CFSAN

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA

characteristic: collected by

text: 835098 2-1

text: USA:IL

text: mung bean sprout

text: mung bean whole:FOODON_03301275, bean sprout:FOODON_00002576

characteristic: ontological term

text: Listeria monocytogenes

text: food

text: FDA835098 2-1


text: Mahidol University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: SRA accession

text: Angkana Chaiprasert

characteristic: collection date

text: MDR-TB isolate from an outbreak in Thailand.

characteristic: description

characteristic: genotype

text: Thailand

text: Homo sapiens

characteristic: host

text: sputum

text: 13.750000 N 100.466700 E

text: Beijing

characteristic: note

text: Mycobacterium tuberculosis

text: not abblicable

characteristic: temp

text: Mycobacterium tuberculosis Beijing ST-10

characteristic: title


FDA874874 S2

characteristic: External Id

text: stone fruit

text: FDA/CFSAN

characteristic: INSDC center name

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: FDA

text: 874874 S2

characteristic: fda lab id

text: USA:CA

characteristic: geo loc name

text: peach

characteristic: isolation source

text: peach (whole, raw):FOODON_03301719

text: Listeria monocytogenes

characteristic: organism

characteristic: pfge primary enzyme pattern

text: food

characteristic: source type

text: FDA874874 S2


text: University of Hawaii

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIMS.me

text: MIGS/MIMS/MIMARKS.plant-associated

characteristic: SRA accession

characteristic: biological replicate

characteristic: collection date

text: forest

characteristic: env biome

characteristic: env feature

text: Ceodes umbellifera

text: 21.467 N 158.103 W

characteristic: lat lon

text: Achatinella mustelina


characteristic: External Id

text: University of Hawaii

characteristic: INSDC center name

text: live

text: MIMS.me

characteristic: NCBI submission model

text: MIGS/MIMS/MIMARKS.plant-associated

characteristic: NCBI submission package

characteristic: description

text: forest

text: Kadua affinis

characteristic: host

text: 21.416 N 158.100 W

text: Achatinella mustelina

characteristic: title


text: University of Hawaii

characteristic: INSDC first public

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.plant-associated

text: forest

text: USA:_Hawaii,_Oahu,_Waianae,_Kahana_haiki

characteristic: geo loc name

text: Kadua affinis

text: 21.538 N 158.195 W

text: Achatinella mustelina

characteristic: organism


text: University of Hawaii

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIMS.me

text: MIGS/MIMS/MIMARKS.plant-associated

text: Pisonia_sandwicensis_tree_leaf_surface_1

text: forest

text: Rockia sandwicensis

text: 21.322 N 158.114 W

text: Achatinella mustelina


text: University of Hawaii

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.plant-associated

characteristic: SRA accession

text: Pisonia_sandwicensis_tree_leaf_surface_2

characteristic: biological replicate

characteristic: collection date

text: forest

text: Rockia sandwicensis

text: 21.322 N 158.114 W

text: Achatinella mustelina


text: University of Hawaii

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.plant-associated

text: Pisonia_sandwicensis_tree_leaf_surface_3

text: forest

characteristic: env biome

characteristic: env feature

text: Rockia sandwicensis

text: 21.322 N 158.114 W

characteristic: lat lon

text: Achatinella mustelina


name: T1(the leaf of plant grown in atmospheric CO2 concentration); T2(the leaf of plant grown in elevated CO2 concentration)

characteristic: External Id

text: Institute of Natural Resources and Ecology, Heilongjiang Academy of Science

characteristic: INSDC center name

text: live

text: Plant

characteristic: NCBI submission model

text: National Wetland and Ecological Conservation Engineering Lab, No.103 Haping Road, Harbin, China

characteristic: biomaterial provider

text: no cultivar name

characteristic: cultivar

text: Calamagrostis linifolia

text: Leaf

characteristic: tissue

text: Plant sample from Calamagrostis linifolia


text: multi-ingredient, meat

characteristic: IFSAC Category

text: FDA/CFSAN

characteristic: INSDC first public

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: USDA-FSIS

characteristic: collected by

text: USA:CA

characteristic: geo loc name

text: ready to eat andouie sausage

characteristic: isolation source

text: food (ready-to-serve):FOODON_03316636, food (ready-to-serve):FOODON_03316636, sausage (formed):FOODON_03315904

characteristic: ontological term

text: Listeria monocytogenes

characteristic: pfge primary enzyme pattern

text: GenomeTrakr

characteristic: project name

text: FDA Center for Food Safety and Applied Nutrition

characteristic: sequenced by

text: food

characteristic: source type

characteristic: strain

characteristic: title


characteristic: External Id

text: environmental-water

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: SRA accession

text: Western Carolina University (WCU)

characteristic: collection date

text: USA:NC

text: sediment pond

text: pond:ENVO_00000033, sediment:ENVO_00002007

text: Salmonella enterica

characteristic: organism

text: environmental

text: Pathogen: environmental/food/other sample from Salmonella enterica


text: veterinary clinical/research| other animal

characteristic: INSDC first public

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: Western Carolina University (WCU)

characteristic: collected by

text: USA:NC

characteristic: geo loc name

text: bird feces

characteristic: isolation source

text: avian animal:FOODON_00002616, feces:UBERON_0001988

characteristic: ontological term

text: Salmonella enterica

text: animal


text: environmental-water

text: live

text: Pathogen.env

text: FLUFL

text: USA:GA

text: water pond

text: pond water:ENVO_00002228

text: Salmonella enterica

text: environmental

characteristic: source type

characteristic: strain

characteristic: title


characteristic: External Id

text: environmental-water

characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

text: Pathogen.env

text: FLUFL

text: USA:GA

text: sediment

text: Salmonella enterica

text: environmental


text: environmental-water

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

text: FLUFL

text: USA:FL

text: river water

text: river water:ENVO_01000599

text: Salmonella enterica

text: environmental


text: University of Texas at Austin

text: live

text: MIMS.me

characteristic: NCBI submission model

text: MIGS/MIMS/MIMARKS.host-associated

characteristic: SRA accession

characteristic: collection date

characteristic: collection time

text: 16S amplicon reads from Apis mellifera gut sample, spatio-temporal dynamics sample

characteristic: description

text: hive reared

characteristic: env feature

text: gut samples

text: USA: Connecticut

text: Apis mellifera

characteristic: host

text: Ileum

characteristic: host body habitat

characteristic: host colony

text: female

characteristic: host sex

text: 41.255377 N 72.990691 W

characteristic: lat lon

text: bee metagenome

characteristic: replicate

text: MIMS Environmental/Metagenome sample from bee metagenome


characteristic: External Id

text: University of Texas at Austin

characteristic: INSDC first public

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.host-associated

characteristic: NCBI submission package

text: hive reared

text: gut samples

text: USA: Connecticut

characteristic: geo loc name

text: Apis mellifera

text: rectum

text: female

text: 41.255377 N 72.990691 W

text: bee metagenome

characteristic: organism

characteristic: title


text: University of Texas at Austin

characteristic: INSDC center name

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIMS.me

characteristic: NCBI submission model

text: MIGS/MIMS/MIMARKS.host-associated

characteristic: SRA accession

text: F

text: 16S amplicon reads from Apis mellifera gut sample, transmission route sample

text: Frame exposed NEW

text: gut samples

text: USA: Connecticut

text: Apis mellifera

text: whole gut

text: female

text: 41.255377 N 72.990691 W

text: bee metagenome


text: University of Texas at Austin

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.host-associated

characteristic: collection date

text: FN

characteristic: description

text: Frame and nurse exposed NEW

characteristic: env feature

text: gut samples

text: USA: Connecticut

text: Apis mellifera

characteristic: host

text: whole gut

characteristic: host body habitat

text: female

text: 41.255377 N 72.990691 W

text: bee metagenome


characteristic: External Id

text: University of Texas at Austin

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.host-associated

text: HG

text: Hindgut exposed NEW

text: gut samples

text: USA: Connecticut

text: Apis mellifera

text: whole gut

text: female

characteristic: host sex

text: 41.255377 N 72.990691 W

characteristic: lat lon

text: bee metagenome

characteristic: replicate


text: University of Texas at Austin

characteristic: INSDC first public

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.host-associated

characteristic: NCBI submission package

text: N

text: Nurse exposed NEW

text: gut samples

text: USA: Connecticut

characteristic: geo loc name

text: Apis mellifera

text: whole gut

text: female

text: 41.255377 N 72.990691 W

text: bee metagenome

characteristic: organism


text: University of Texas at Austin

characteristic: INSDC center name

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.host-associated

text: N

text: Nurse head exposed NEW

text: gut samples

text: USA: Connecticut

text: Apis mellifera

text: whole gut

text: female

text: 41.255377 N 72.990691 W

text: bee metagenome

characteristic: title


text: University of Texas at Austin

text: live

characteristic: INSDC status

text: MIMS.me

characteristic: NCBI submission model

text: MIGS/MIMS/MIMARKS.host-associated

characteristic: SRA accession

characteristic: collection date

text: NH

text: Nurse head exposed NEW

text: gut samples

text: USA: Connecticut

text: Apis mellifera

text: whole gut

text: female

text: 41.255377 N 72.990691 W

text: bee metagenome


text: University of Texas at Austin

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.host-associated

characteristic: description

text: previously characterized sample

characteristic: env feature

text: gut samples

text: USA: Connecticut

text: Apis mellifera

characteristic: host

text: whole gut

characteristic: host body habitat

text: female

text: 32.27555344 N 110.94159901 W

text: bee metagenome


characteristic: External Id

text: dbGaP

text: live

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: blood

characteristic: body site

text: HMB-IRB-MDS

text: Homo sapiens

text: female

characteristic: sex

text: Prospective Longitudinal Cohort

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: DNA sample from blood of a human female participant in the dbGaP study NHLBI Framingham SNP Health Association Resource (SHARe)


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

text: blood

text: HMB-IRB-MDS

text: Homo sapiens

characteristic: organism

text: male

text: Prospective Longitudinal Cohort

text: DNA sample from blood of a human male participant in the dbGaP study NHLBI Framingham SNP Health Association Resource (SHARe)

characteristic: title


characteristic: External Id

text: dbGaP

text: live

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

text: blood

text: HMB-IRB-MDS

text: Homo sapiens

text: female

text: Prospective Longitudinal Cohort

text: NHLBI Framingham SNP Health Association Resource (SHARe)


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: biospecimen repository sample id

text: cell

characteristic: body site

text: HMB-IRB-MDS

text: Homo sapiens

text: female

characteristic: sex

text: Prospective Longitudinal Cohort

text: DNA sample from cell of a human female participant in the dbGaP study NHLBI Framingham SNP Health Association Resource (SHARe)


text: dbGaP

text: live

text: Generic

text: DNA

text: cell

text: HMB-IRB-NPU-MDS

text: Homo sapiens

text: male

text: Prospective Longitudinal Cohort

characteristic: study design

characteristic: study name

characteristic: submitted sample id

text: DNA sample from cell of a human male participant in the dbGaP study NHLBI Framingham SNP Health Association Resource (SHARe)


text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

text: DNA

text: blood

text: HMB-IRB-MDS

text: Homo sapiens

text: male

text: Prospective Longitudinal Cohort

characteristic: submitted subject id

characteristic: submitter handle


text: dbGaP

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: DNA

text: blood

text: HMB-IRB-NPU-MDS

text: Homo sapiens

text: female

text: Prospective Longitudinal Cohort


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

text: cell

text: HMB-IRB-MDS

text: Homo sapiens

characteristic: organism

text: male

text: Prospective Longitudinal Cohort


characteristic: External Id

text: dbGaP

text: live

text: Generic

text: DNA

characteristic: analyte type

text: cell

text: HMB-IRB-NPU-MDS

text: Homo sapiens

text: female

text: Prospective Longitudinal Cohort

characteristic: title


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: blood

characteristic: body site

text: HMB-IRB-NPU-MDS

text: Homo sapiens

text: male

text: Prospective Longitudinal Cohort


text: dbGaP

text: live

text: Generic

text: RNA

text: blood

text: HMB-IRB-MDS

text: Homo sapiens

text: male

characteristic: sex

text: Prospective Longitudinal Cohort

characteristic: study design

text: SABRe CVD

characteristic: study name

text: RNA sample from blood of a human male participant in the dbGaP study SABRe CVD


text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

text: RNA

text: blood

text: HMB-IRB-MDS

text: Homo sapiens

text: female

text: Prospective Longitudinal Cohort

text: SABRe CVD

characteristic: submitted sample id

characteristic: submitted subject id

text: RNA sample from blood of a human female participant in the dbGaP study SABRe CVD


text: dbGaP

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: RNA

text: blood

text: HMB-IRB-NPU-MDS

text: Homo sapiens

text: female

text: Prospective Longitudinal Cohort

text: SABRe CVD

characteristic: submitter handle


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: RNA

text: blood

text: HMB-IRB-NPU-MDS

text: Homo sapiens

text: male

text: Prospective Longitudinal Cohort

text: SABRe CVD


characteristic: External Id

text: dbGaP

text: live

text: Generic

text: DNA

characteristic: analyte type

text: Peripheral blood

text: HMB-IRB-MDS

text: Buffy coat

characteristic: histological type

text: No

characteristic: is tumor

text: Methylation (CpG)

characteristic: molecular data type

text: Homo sapiens

characteristic: organism

text: male

text: Prospective Longitudinal Cohort

text: Non-tumor DNA sample from Peripheral blood of a human male participant in the dbGaP study Framingham Offspring Exam 8 and Generation 3 Exam 2 450K Array DNA Methylation Study


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Peripheral blood

characteristic: body site

text: HMB-IRB-MDS

text: Buffy coat

text: No

text: Methylation (CpG)

text: Homo sapiens

text: female

characteristic: sex

text: Prospective Longitudinal Cohort

characteristic: study design

text: Non-tumor DNA sample from Peripheral blood of a human female participant in the dbGaP study Framingham Offspring Exam 8 and Generation 3 Exam 2 450K Array DNA Methylation Study

characteristic: title


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: DNA

text: Peripheral blood

text: HMB-IRB-MDS

text: Buffy coat

text: No

text: Methylation (CpG)

text: Homo sapiens

text: male

text: Prospective Longitudinal Cohort

text: Framingham Offspring Exam 8 and Generation 3 Exam 2 450K Array DNA Methylation Study

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id


characteristic: External Id

text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

characteristic: analyte type

text: Peripheral blood

text: HMB-IRB-MDS

text: Buffy coat

text: No

text: Methylation (CpG)

text: Homo sapiens

text: female

text: Prospective Longitudinal Cohort

characteristic: submitter handle


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Peripheral blood

text: HMB-IRB-NPU-MDS

text: Buffy coat

characteristic: histological type

text: No

characteristic: is tumor

text: Methylation (CpG)

characteristic: molecular data type

text: Homo sapiens

characteristic: organism

text: female

text: Prospective Longitudinal Cohort


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: DNA

text: Peripheral blood

characteristic: body site

text: HMB-IRB-NPU-MDS

text: Buffy coat

text: No

text: Methylation (CpG)

text: Homo sapiens

text: male

characteristic: sex

text: Prospective Longitudinal Cohort

characteristic: study design

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: Yes

characteristic: is technical control

text: Methylation (CpG)

text: Homo sapiens

text: Prospective Longitudinal Cohort

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

text: Sample from a human participant in the dbGaP study Framingham Offspring Exam 8 and Generation 3 Exam 2 450K Array DNA Methylation Study


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Yes

text: Methylation (CpG)

text: Homo sapiens

text: Prospective Longitudinal Cohort

text: LiverControl

characteristic: submitter handle


text: Institute of Microbiology and Genetics

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: MIMS.me

characteristic: SRA accession

characteristic: collection date

characteristic: depth

text: mixedrootsample

characteristic: description

characteristic: elev

text: temperate mixed forest biome

characteristic: env biome

text: forest soil

characteristic: env feature

text: tree fine root

characteristic: forest type

text: Germany: Hainich Dun

text: 51.1853551 N 10.3236211 E

characteristic: lat lon

text: soil metagenome

characteristic: organism

characteristic: plot id

characteristic: plotid

text: Stagnosol

characteristic: soil type


characteristic: External Id

text: Institute of Microbiology and Genetics

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIMS.me

characteristic: NCBI submission model

characteristic: NCBI submission package

text: mixedrootsample

text: temperate mixed forest biome

text: forest soil

text: tree fine root

text: Germany: Hainich Dun

text: 51.2100113 N 10.3699539 E

text: soil metagenome

text: Stagnosol

characteristic: title


text: Institute of Microbiology and Genetics

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: MIMS.me

characteristic: SRA accession

characteristic: collection date

characteristic: depth

text: mixedrootsample

text: temperate mixed forest biome

text: forest soil

text: tree fine root

text: Germany: Hainich Dun

text: 51.2716477 N 10.3107385 E

text: soil metagenome

text: Luvisol


text: Institute of Microbiology and Genetics

text: live

text: MIMS.me

text: mixedrootsample

characteristic: description

characteristic: elev

text: temperate mixed forest biome

characteristic: env biome

text: forest soil

characteristic: env feature

text: tree fine root

characteristic: forest type

text: Germany: Hainich Dun

text: 51.3694816 N 10.5333275 E

characteristic: lat lon

text: soil metagenome

text: Luvisol


characteristic: External Id

text: Institute of Microbiology and Genetics

characteristic: INSDC last update

text: live

text: MIMS.me

text: mixedrootsample

text: temperate mixed forest biome

text: forest soil

text: tree fine root

text: Germany: Hainich Dun

text: 51.2638781 N 10.2409579 E

text: soil metagenome

characteristic: organism

characteristic: plot id

characteristic: plotid

text: Luvisol

characteristic: soil type


text: Institute of Microbiology and Genetics

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: MIMS.me

characteristic: NCBI submission model

characteristic: NCBI submission package

text: mixedrootsample

text: temperate mixed forest biome

text: forest soil

text: tree fine root

text: Germany: Hainich Dun

text: 51.2677198 N 10.2393783 E

text: soil metagenome

text: Luvisol

characteristic: title


text: Institute of Microbiology and Genetics

characteristic: INSDC secondary accession

text: live

text: MIMS.me

characteristic: SRA accession

characteristic: collection date

characteristic: depth

text: mixedrootsample

characteristic: description

characteristic: elev

text: temperate mixed forest biome

text: forest soil

text: tree fine root

text: Germany: Hainich Dun

text: 51.1310924 N 10.3854489 E

text: soil metagenome

text: Luvisol


characteristic: External Id

text: Institute of Microbiology and Genetics

characteristic: INSDC last update

text: live

text: MIMS.me

text: mixedrootsample

text: temperate mixed forest biome

characteristic: env biome

text: forest soil

characteristic: env feature

text: tree fine root

characteristic: forest type

text: Germany: Hainich Dun

text: 51.3557922 N 10.5169674 E

characteristic: lat lon

text: soil metagenome

text: Luvisol


text: Institute of Microbiology and Genetics

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIMS.me

text: mixedrootsample

text: temperate mixed forest biome

text: forest soil

text: tree fine root

text: Germany: Hainich Dun

text: 51.1302419 N 10.3811497 E

text: soil metagenome

characteristic: organism

characteristic: plot id

characteristic: plotid

text: Luvisol

characteristic: soil type


text: Institute of Microbiology and Genetics

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIMS.me

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: mixedrootsample

text: temperate mixed forest biome

text: forest soil

text: tree fine root

text: Germany: Hainich Dun

text: 51.0899873 N 10.4624339 E

text: soil metagenome

text: Stagnosol

characteristic: title


characteristic: External Id

text: Institute of Microbiology and Genetics

characteristic: INSDC last update

text: live

text: MIMS.me

characteristic: collection date

characteristic: depth

text: mixedrootsample

characteristic: description

characteristic: elev

text: temperate mixed forest biome

text: forest soil

text: tree fine root

text: Germany: Hainich Dun

text: 51.1028344 N 10.4008543 E

text: soil metagenome

text: Luvisol


text: Institute of Microbiology and Genetics

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIMS.me

text: mixedrootsample

text: temperate mixed forest biome

characteristic: env biome

text: forest soil

characteristic: env feature

text: tree fine root

characteristic: forest type

text: Germany: Hainich Dun

text: 51.1006881 N 10.455183 E

characteristic: lat lon

text: soil metagenome

text: Luvisol


text: Institute of Microbiology and Genetics

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIMS.me

text: mixedrootsample

text: temperate mixed forest biome

text: forest soil

text: tree fine root

text: Germany: Hainich Dun

text: 51.242644 N 10.3129467 E

text: soil metagenome

characteristic: organism

characteristic: plot id

characteristic: plotid

text: Luvisol

characteristic: soil type


characteristic: External Id

text: Institute of Microbiology and Genetics

characteristic: INSDC last update

text: live

text: MIMS.me

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: mixedrootsample

text: temperate mixed forest biome

text: forest soil

text: tree fine root

text: Germany: Hainich Dun

text: 51.3661639 N 10.2581517 E

text: soil metagenome

text: Luvisol

characteristic: title


text: Institute of Microbiology and Genetics

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIMS.me

characteristic: collection date

characteristic: depth

text: mixedrootsample

characteristic: description

characteristic: elev

text: temperate mixed forest biome

text: forest soil

text: tree fine root

text: Germany: Hainich Dun

text: 51.2050772 N 10.3901619 E

text: soil metagenome

text: Luvisol


text: Institute of Microbiology and Genetics

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIMS.me

text: mixedrootsample

text: temperate mixed forest biome

characteristic: env biome

text: forest soil

characteristic: env feature

text: tree fine root

characteristic: forest type

text: Germany: Hainich Dun

text: 51.1831604 N 10.3654659 E

characteristic: lat lon

text: soil metagenome

text: Luvisol


characteristic: External Id

text: Institute of Microbiology and Genetics

characteristic: INSDC last update

text: live

text: MIMS.me

text: mixedrootsample

text: temperate mixed forest biome

text: forest soil

text: tree fine root

text: Germany: Hainich Dun

text: 51.2828136 N 10.2269038 E

text: soil metagenome

characteristic: organism

characteristic: plot id

characteristic: plotid

text: Luvisol

characteristic: soil type


text: Institute of Microbiology and Genetics

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIMS.me

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: mixedrootsample

text: temperate mixed forest biome

text: forest soil

text: tree fine root

text: Germany: Hainich Dun

text: 51.3369669 N 10.365456 E

text: soil metagenome

text: Stagnosol

characteristic: title


text: Institute of Microbiology and Genetics

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIMS.me

characteristic: collection date

characteristic: depth

text: mixedrootsample

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text: temperate mixed forest biome

text: forest soil

text: tree fine root

text: Germany: Hainich Dun

text: 51.1992292 N 10.3377263 E

text: soil metagenome

text: Luvisol


characteristic: External Id

text: Institute of Microbiology and Genetics

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characteristic: env biome

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characteristic: env feature

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characteristic: forest type

text: Germany: Hainich Dun

text: 51.3339278 N 10.3602545 E

characteristic: lat lon

text: soil metagenome

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text: Institute of Microbiology and Genetics

characteristic: INSDC center name

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text: temperate mixed forest biome

text: forest soil

text: tree fine root

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text: 51.1942783 N 10.3190054 E

text: soil metagenome

characteristic: organism

characteristic: plot id

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characteristic: soil type


text: Institute of Microbiology and Genetics

characteristic: INSDC secondary accession

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characteristic: NCBI submission model

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characteristic: SRA accession

text: mixedrootsample

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text: forest soil

text: tree fine root

text: Germany: Hainich Dun

text: 51.3371503 N 10.3592785 E

text: soil metagenome

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characteristic: title


characteristic: External Id

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characteristic: collection date

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text: temperate mixed forest biome

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text: tree fine root

text: Germany: Hainich Dun

text: 51.2782177 N 10.2084481 E

text: soil metagenome

text: Luvisol


text: Institute of Microbiology and Genetics

characteristic: INSDC center name

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characteristic: env biome

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characteristic: env feature

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characteristic: forest type

text: Germany: Hainich Dun

text: 51.0465027 N 10.4912116 E

characteristic: lat lon

text: soil metagenome

text: Luvisol


text: Institute of Microbiology and Genetics

characteristic: INSDC secondary accession

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characteristic: INSDC status

text: MIMS.me

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text: temperate mixed forest biome

text: forest soil

text: tree fine root

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text: 51.284567 N 10.2239694 E

text: soil metagenome

characteristic: organism

characteristic: plot id

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characteristic: NCBI submission model

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text: mixedrootsample

text: temperate mixed forest biome

text: forest soil

text: tree fine root

text: Germany: Hainich Dun

text: 51.3443262 N 10.5130315 E

text: soil metagenome

text: Luvisol

characteristic: title


text: Institute of Microbiology and Genetics

characteristic: INSDC center name

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text: live

text: MIMS.me

characteristic: collection date

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characteristic: description

characteristic: elev

text: temperate mixed forest biome

text: forest soil

text: tree fine root

text: Germany: Hainich Dun

text: 51.3561161 N 10.521264 E

text: soil metagenome

text: Luvisol


text: Institute of Microbiology and Genetics

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIMS.me

text: mixedrootsample

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characteristic: env biome

text: forest soil

characteristic: env feature

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characteristic: forest type

text: Germany: Hainich Dun

text: 51.3588841 N 10.5269179 E

characteristic: lat lon

text: soil metagenome

text: Stagnosol


characteristic: External Id

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characteristic: INSDC last update

text: live

text: MIMS.me

text: mixedrootsample

text: temperate mixed forest biome

text: forest soil

text: tree fine root

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text: 51.1275428 N 10.3796868 E

text: soil metagenome

characteristic: organism

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characteristic: INSDC center name

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characteristic: NCBI submission model

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characteristic: SRA accession

text: mixedrootsample

text: temperate mixed forest biome

text: forest soil

text: tree fine root

text: Germany: Hainich Dun

text: 51.1346839 N 10.3786368 E

text: soil metagenome

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characteristic: title


text: Institute of Microbiology and Genetics

characteristic: INSDC secondary accession

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characteristic: description

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text: temperate mixed forest biome

text: forest soil

text: tree fine root

text: Germany: Hainich Dun

text: 51.1422526 N 10.3773142 E

text: soil metagenome

text: Luvisol


characteristic: External Id

text: Institute of Microbiology and Genetics

characteristic: INSDC last update

text: live

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characteristic: env biome

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characteristic: env feature

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characteristic: forest type

text: Germany: Hainich Dun

text: 51.1395283 N 10.3585903 E

characteristic: lat lon

text: soil metagenome

text: Luvisol


text: Institute of Microbiology and Genetics

characteristic: INSDC center name

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text: live

text: MIMS.me

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text: temperate mixed forest biome

text: forest soil

text: tree fine root

text: Germany: Hainich Dun

text: 51.3415759 N 10.5088149 E

text: soil metagenome

characteristic: organism

characteristic: plot id

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characteristic: INSDC secondary accession

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characteristic: SRA accession

text: mixedrootsample

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text: forest soil

text: tree fine root

text: Germany: Hainich Dun

text: 51.0847108 N 10.4542736 E

text: soil metagenome

text: Luvisol

characteristic: title


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text: temperate mixed forest biome

text: forest soil

text: tree fine root

text: Germany: Hainich Dun

text: 51.10469 N 10.4050739 E

text: soil metagenome

text: Luvisol


text: Institute of Microbiology and Genetics

characteristic: INSDC center name

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characteristic: env feature

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characteristic: forest type

text: Germany: Hainich Dun

text: 51.1062758 N 10.4093032 E

characteristic: lat lon

text: soil metagenome

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text: Institute of Microbiology and Genetics

characteristic: INSDC secondary accession

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text: MIMS.me

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text: temperate mixed forest biome

text: forest soil

text: tree fine root

text: Germany: Hainich Dun

text: 51.0844264 N 10.4586076 E

text: soil metagenome

characteristic: organism

characteristic: plot id

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characteristic: INSDC last update

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characteristic: SRA accession

text: mixedrootsample

text: temperate mixed forest biome

text: forest soil

text: tree fine root

text: Germany: Hainich Dun

text: 51.0793591 N 10.4601745 E

text: soil metagenome

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characteristic: title


text: Institute of Microbiology and Genetics

characteristic: INSDC center name

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characteristic: collection date

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text: temperate mixed forest biome

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text: tree fine root

text: Germany: Hainich Dun

text: 51.0929539 N 10.4658615 E

text: soil metagenome

text: Luvisol


text: Institute of Microbiology and Genetics

characteristic: INSDC secondary accession

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characteristic: env feature

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characteristic: forest type

text: Germany: Hainich Dun

text: 51.0799443 N 10.4982589 E

characteristic: lat lon

text: soil metagenome

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text: Institute of Microbiology and Genetics

characteristic: INSDC last update

text: live

text: MIMS.me

text: mixedrootsample

text: temperate mixed forest biome

text: forest soil

text: tree fine root

text: Germany: Hainich Dun

text: 51.1080562 N 10.4549374 E

text: soil metagenome

characteristic: organism

characteristic: plot id

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text: Luvisol

characteristic: soil type


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characteristic: INSDC center name

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text: mixedrootsample

text: temperate mixed forest biome

text: forest soil

text: tree fine root

text: Germany: Hainich Dun

text: 51.102754 N 10.4598259 E

text: soil metagenome

text: Stagnosol

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text: Institute of Microbiology and Genetics

characteristic: INSDC secondary accession

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text: MIMS.me

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characteristic: description

characteristic: elev

text: temperate mixed forest biome

text: forest soil

text: tree fine root

text: Germany: Hainich Dun

text: 51.3320987 N 10.3580239 E

text: soil metagenome

text: Stagnosol


characteristic: External Id

text: Institute of Microbiology and Genetics

characteristic: INSDC last update

text: live

text: MIMS.me

text: mixedrootsample

text: temperate mixed forest biome

characteristic: env biome

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characteristic: env feature

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characteristic: forest type

text: Germany: Hainich Dun

text: 51.3336766 N 10.3680125 E

characteristic: lat lon

text: soil metagenome

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text: Institute of Microbiology and Genetics

characteristic: INSDC center name

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text: live

text: MIMS.me

text: mixedrootsample

text: temperate mixed forest biome

text: forest soil

text: tree fine root

text: Germany: Hainich Dun

text: 51.3639605 N 10.2611072 E

text: soil metagenome

characteristic: organism

characteristic: plot id

characteristic: plotid

text: Luvisol

characteristic: soil type


text: Institute of Microbiology and Genetics

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIMS.me

characteristic: NCBI submission model

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characteristic: SRA accession

text: mixedrootsample

text: temperate mixed forest biome

text: forest soil

text: tree fine root

text: Germany: Hainich Dun

text: 51.0480964 N 10.4754725 E

text: soil metagenome

text: Luvisol

characteristic: title


characteristic: External Id

text: Institute of Microbiology and Genetics

characteristic: INSDC last update

text: live

text: MIMS.me

characteristic: collection date

characteristic: depth

text: mixedrootsample

characteristic: description

characteristic: elev

text: temperate mixed forest biome

text: forest soil

text: tree fine root

text: Germany: Hainich Dun

text: 51.1789347 N 10.3783439 E

text: soil metagenome

text: Stagnosol


text: Institute of Microbiology and Genetics

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIMS.me

text: mixedrootsample

text: temperate mixed forest biome

characteristic: env biome

text: forest soil

characteristic: env feature

text: tree fine root

characteristic: forest type

text: Germany: Hainich Dun

text: 51.1366896 N 10.3936983 E

characteristic: lat lon

text: soil metagenome

text: Stagnosol


text: Institute of Microbiology and Genetics

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIMS.me

text: mixedrootsample

text: temperate mixed forest biome

text: forest soil

text: tree fine root

text: Germany: Hainich Dun

text: 51.1436471 N 10.3845394 E

text: soil metagenome

characteristic: organism

characteristic: plot id

characteristic: plotid

text: Stagnosol

characteristic: soil type


characteristic: External Id

text: Institute of Microbiology and Genetics

characteristic: INSDC last update

text: live

text: MIMS.me

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: mixedrootsample

text: temperate mixed forest biome

text: forest soil

text: tree fine root

text: Germany: Hainich Dun

text: 51.0928168 N 10.4554452 E

text: soil metagenome

text: Stagnosol

characteristic: title


name: Cylindrospermum alatosaporum CCALA 988 (C24)

text: Biology Centre ASCR, v.v.i

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIGS.ba

text: free living

characteristic: biotic relationship

characteristic: collection date

text: 0 cm

characteristic: depth

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: upland temperate forest

text: soil 3-4 years after wild fire

text: soil

text: 7.6 Mb

characteristic: estimated size

text: Canada: Manitoba, Riding Mountain National Park

characteristic: geo loc name

text: BG 11 medium, room temperature, 12:12 light:dark cycle

text: Cylindrospermum alatosporum CCALA 988

text: Mares J., Hajek J., Urajova P., Kopecky J., Hrouzek P. (2014) A hybrid non-ribosomal peptide/polyketide synthetase containing fatty-acyl ligase (FAAL) synthesizes the beta-amino fatty acid lipopeptides puwainaphycins in the cyanobacterium Cylindrospermum alatosporum. PLoS ONE: (in press)

text: aerobe

text: CCALA 988

characteristic: strain

text: Cylindrospermum alatosporum CCALA 988 de novo WGS data

text: autotroph

text: reference strain of Cylindrospermum alatosporum

characteristic: type-material


text: Immanuel Kant Baltic Federal University

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: Fervidobacterium riparium is a novel species of extremely thermophilic organotrophic bacterium, capable of growing on various biopolymers including starch and cellulose. It was isolated from the tidal thermal hot spring of Kunashir Island, Kurils, Russia.

text: Russia: Kunashir, Kuril Islands

text: hot spring (pH 5.5, T 50C)

characteristic: isolation source

text: Fervidobacterium riparium

characteristic: organism

text: Fervidobacterium riparium strain 1445t


ZB 15

characteristic: External Id

text: Jiangnan University

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: China

text: Wine lees

text: Zygosaccharomyces bailii

text: Zygosaccharomyces bailii

text: Microbe sample from Zygosaccharomyces bailii


text: environmental-water

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: SRA accession

text: USA:VA

text: water

characteristic: ontological term

text: Salmonella enterica

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: environmental

characteristic: source type

text: Pathogen: environmental/food/other sample from Salmonella enterica

characteristic: title


text: environmental-water

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

characteristic: collection date

text: USA:VA

characteristic: geo loc name

text: water

text: Salmonella enterica

text: GenomeTrakr

text: environmental

characteristic: strain


characteristic: External Id

text: environmental-water

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: USA:VA

text: sediment

characteristic: isolation source

text: Salmonella enterica

characteristic: organism

text: GenomeTrakr

text: environmental


text: environmental-water

characteristic: IFSAC+ Category

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: USA:VA

text: sediment

text: Salmonella enterica

text: GenomeTrakr

text: environmental


text: environmental-water

text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: SRA accession

text: USA:VA

text: water gallon

text: water:CHEBI_15377, gallon:uo_0010030

characteristic: ontological term

text: Salmonella enterica

text: GenomeTrakr

characteristic: project name

text: environmental


text: environmental-water

characteristic: INSDC center name

text: live

text: Pathogen.env

text: USA:VA

text: water gallon

text: water:CHEBI_15377, gallon:uo_0010030

text: Salmonella enterica

text: GenomeTrakr

characteristic: sequenced by

text: environmental

characteristic: source type

characteristic: title


text: environmental-water

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

characteristic: collection date

text: USA:VA

characteristic: geo loc name

text: water gallon

text: Salmonella enterica

text: GenomeTrakr

text: environmental

characteristic: strain


characteristic: External Id

text: environmental-water

text: live

characteristic: INSDC status

text: Pathogen.env

text: USA:VA

text: water gallon

characteristic: isolation source

text: water:CHEBI_15377, gallon:uo_0010030

text: Pseudomonas sp.

characteristic: organism

text: environmental

text: Pathogen: environmental/food/other sample from Pseudomonas sp.


text: environmental-water

characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: USA:VA

text: water gallon

text: water:CHEBI_15377, gallon:uo_0010030

text: Citrobacter sp.

text: environmental

text: Pathogen: environmental/food/other sample from Citrobacter sp.


text: Aalborg University

characteristic: INSDC secondary accession

text: live

text: MIGS.eu

characteristic: NCBI submission package

characteristic: SRA accession

text: Shotgun sequence of Thermomucor indicae-seudaticae

characteristic: description

text: municipal compost

text: 29 MB

characteristic: estimated size

text: India: Maharashtra, Poona

text: 18.52 N 73.85 E

characteristic: lat lon

text: Thermomucor indicae-seudaticae

text: diploid

characteristic: ploidy

text: asexual

characteristic: propagation

text: HACC 243

text: MIGS Eukaryotic sample from Thermomucor indicae-seudaticae

text: type material of Mucor indicae-seudaticae

characteristic: type material


text: Technical University of Denmark

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: Baltic Sea: Landsort Deep

characteristic: geo loc name

text: surface water

text: Stutzerimonas stutzeri

characteristic: strain

text: Microbe sample from Stutzerimonas stutzeri

characteristic: title


characteristic: External Id

text: multi-ingredient

characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: USDA-FSIS

characteristic: collected by

text: USA:TX

text: barbacoa

characteristic: isolation source

text: Listeria monocytogenes

characteristic: organism

characteristic: pfge primary enzyme pattern

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: food

characteristic: source type

text: Pathogen: environmental/food/other sample from Listeria monocytogenes


text: environmental-factory/production facility

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: USDA-FSIS

text: USA:TX

text: environmental swab sponge food contact surface

text: environmental (swab or sampling):GENEPIO_0001732| environmental sponge:CURATION_0000359| swab - food contact surface (deprecated):GENEPIO_0001720

characteristic: ontological term

text: Listeria monocytogenes

text: GenomeTrakr

text: environmental


characteristic: External Id

characteristic: INSDC first public

text: live

text: Pathogen.env

text: USDA-FSIS

characteristic: collection date

text: USA:AK

characteristic: geo loc name

text: environmental swab sponge non food contact surface

text: Listeria monocytogenes

text: GenomeTrakr

text: environmental

characteristic: strain

characteristic: title


text: multi-ingredient| turkey

characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: USDA-FSIS

characteristic: collected by

text: USA:CO

text: ready to eat turkey wrap

characteristic: isolation source

text: food (ready-to-serve):FOODON_03316636|domestic turkey:FOODON_03414166|flatbread wrap:FOODON_0000294

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

text: food


characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

text: USDA-FSIS

text: USA:TX

text: Listeria monocytogenes

characteristic: pfge primary enzyme pattern

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: environmental

characteristic: source type


characteristic: External Id

text: multi-ingredient| beef

characteristic: INSDC first public

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: USDA-FSIS

text: USA:MA

text: sliced red pastrami

text: pastrami:CURATION_0000515| sliced:FOODON_03430137

characteristic: ontological term

text: Listeria monocytogenes

text: GenomeTrakr

text: food


text: multi-ingredient| poultry

characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: USDA-FSIS

characteristic: collection date

text: USA:IL

characteristic: geo loc name

text: ready to eat product kung pao chicken

text: chicken:FOODON_03411457|food (ready-to-serve):FOODON_03316636

text: Listeria monocytogenes

text: GenomeTrakr

text: food

characteristic: strain

characteristic: title


characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

text: USDA-FSIS

characteristic: collected by

text: USA:FL

characteristic: isolation source

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

text: environmental


characteristic: External Id

characteristic: INSDC first public

text: live

text: Pathogen.env

text: FDA Contracted Laboratory

text: USA:OK

text: environmental

text: Listeria monocytogenes


text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: FDA Contracted Laboratory

text: USA:OK

text: environmental-porcine

text: Listeria monocytogenes


text: clinical/research

text: live

text: Pathogen.env

text: FDA Contracted Laboratory

text: USA:OK

characteristic: ontological term

text: Listeria monocytogenes


text: live

text: Pathogen.env

text: FDA Contracted Laboratory

text: USA:GA

text: environmental

text: Listeria monocytogenes


text: dairy

characteristic: IFSAC Category

text: live

text: Pathogen.env

text: FDA Contracted Laboratory

text: USA:OR

text: cheese

text: cheese food product:FOODON_00001013

text: Listeria monocytogenes

text: food

characteristic: source type


text: clinical/research, human

characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

text: Pathogen.cl

text: FDA Contracted Laboratory

characteristic: collection date

text: USA:OR

text: Homo sapiens

characteristic: host

text: Listeria monocytogenes

text: human

text: Pathogen: clinical or host-associated sample from Listeria monocytogenes


text: Bonasio, Cell and Developmental Biology, University of Pennsylvania

characteristic: INSDC center name

text: live

text: Generic

characteristic: SRA accession

text: in-house

characteristic: antibody source

characteristic: ip antibody

text: Mus musculus

text: E14 embyonic stem cells

characteristic: title

text: control

characteristic: treatment


characteristic: External Id

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: in-house

text: Mus musculus

characteristic: organism

text: E14 embyonic stem cells

text: 2 µM RA, 24 hrs


text: environmental-water

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC first public

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: FLUFL

characteristic: collected by

text: USA:FL

characteristic: geo loc name

text: river water

characteristic: isolation source

text: river water:ENVO_01000599

characteristic: ontological term

text: Salmonella enterica

text: environmental

characteristic: strain

text: Pathogen: environmental/food/other sample from Salmonella enterica


text: environmental

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: SRA accession

text: Michigan Department of Agriculture

characteristic: collection date

text: USA:MI

text: environmental swab

text: environmental (swab or sampling):GENEPIO_0001732

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: environmental

characteristic: source type


characteristic: External Id

text: environmental

text: live

characteristic: INSDC status

text: Pathogen.env

text: Michigan Department of Agriculture

text: USA:MI

text: environmental swab

text: Listeria monocytogenes

characteristic: organism

text: environmental

characteristic: title


text: University of California, San Francisco

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: cell density

text: YPAD media

characteristic: media

text: Cryptococcus neoformans

text: Yeast

text: CM18 (wild-type)

text: H3K27me3 WT replicate 1


text: University of California, San Francisco

characteristic: INSDC center name

text: live

text: Generic

text: YPAD media

text: Cryptococcus neoformans

text: Yeast

text: CM18 (wild-type)

characteristic: strain

text: H3K27me3 WT replicate 2


text: University of California, San Francisco

characteristic: INSDC last update

text: live

text: Generic

characteristic: SRA accession

text: YPAD media

text: Cryptococcus neoformans

text: Yeast

text: CM18 (wild-type)

text: H3K27me3 WT replicate 3


text: University of California, San Francisco

text: live

text: Generic

text: YPAD media

text: Cryptococcus neoformans

text: Yeast

text: ezh2 knockout

text: H3K27me3 ezh2Δ replicate 1


text: University of California, San Francisco

text: live

text: Generic

text: YPAD media

text: Cryptococcus neoformans

text: Yeast

text: ezh2 knockout

text: H3K27me3 ezh2Δ replicate 2


text: University of California, San Francisco

text: live

text: Generic

text: YPAD media

text: Cryptococcus neoformans

text: Yeast

text: msl1 knockout

text: H3K27me3 msl1Δ replicate 1


text: University of California, San Francisco

text: live

text: Generic

text: YPAD media

text: Cryptococcus neoformans

text: Yeast

text: msl1 knockout

text: H3K27me3 msl1Δ replicate 2


text: University of California, San Francisco

text: live

text: Generic

text: YPAD media

text: Cryptococcus neoformans

text: Yeast

text: ccc1 knockout

text: H3K27me3 ccc1Δ replicate 1


text: University of California, San Francisco

text: live

text: Generic

text: YPAD media

text: Cryptococcus neoformans

text: Yeast

text: ccc1 knockout

text: H3K27me3 ccc1Δ replicate 2


text: University of California, San Francisco

text: live

text: Generic

text: YPAD media

text: Cryptococcus neoformans

text: Yeast

text: ccc1-w52a mutant

text: H3K27me3 ccc1-w52a replicate 1


text: University of California, San Francisco

text: live

text: Generic

text: YPAD media

text: Cryptococcus neoformans

text: Yeast

text: ccc1-w52a mutant

text: H3K27me3 ccc1-w52a replicate 2


text: University of California, San Francisco

text: live

text: Generic

text: YPAD media

text: Cryptococcus neoformans

text: Yeast

text: ccc1-w52a mutant

text: H3K27me3 ccc1-w52a replicate 3


text: University of California, San Francisco

text: live

text: Generic

text: YPAD media

text: Cryptococcus neoformans

text: Yeast

text: clr4 knockout

text: H3K27me3 clr4Δ replicate 1


text: University of California, San Francisco

text: live

text: Generic

text: YPAD media

text: Cryptococcus neoformans

text: Yeast

text: clr4 knockout, ccc1-w52a mutant

text: H3K27me3 ccc1-w52a clr4Δ replicate 1


text: University of California, San Francisco

text: live

text: Generic

text: YPAD media

text: Cryptococcus neoformans

text: Yeast

text: CM18 (wild-type)

text: H3K9me2 WT replicate 1


text: University of California, San Francisco

text: live

text: Generic

text: YPAD media

text: Cryptococcus neoformans

text: Yeast

text: ezh2 knockout

text: H3K9me2 ezh2Δ replicate 1


text: University of California, San Francisco

text: live

text: Generic

text: YPAD media

text: Cryptococcus neoformans

text: Yeast

text: ccc1-w52a mutant

text: H3K9me2 ccc1-w52a replicate 1


text: University of California, San Francisco

text: live

text: Generic

text: YPAD media

text: Cryptococcus neoformans

text: Yeast

text: clr4 knockout

text: H3K9me2 clr4Δ replicate 1


text: University of California, San Francisco

text: live

text: Generic

text: YPAD media

text: Cryptococcus neoformans

text: Yeast

text: CM18 (wild-type)

text: WCE replicate 1


text: University of California, San Francisco

text: live

text: Generic

text: YPAD media

text: Cryptococcus neoformans

text: Yeast

text: CM18 (wild-type)

text: WT replicate 1


text: University of California, San Francisco

text: live

text: Generic

text: YPAD media

text: Cryptococcus neoformans

text: Yeast

text: CM18 (wild-type)

text: WT replicate 2


text: University of California, San Francisco

text: live

text: Generic

text: YPAD media

text: Cryptococcus neoformans

text: Yeast

text: ezh2 knockout

text: ezh2Δ replicate 1


text: University of California, San Francisco

text: live

text: Generic

text: YPAD media

text: Cryptococcus neoformans

text: Yeast

text: ezh2 knockout

text: ezh2Δ replicate 2


text: University of California, San Francisco

text: live

text: Generic

text: YPAD media

text: Cryptococcus neoformans

text: Yeast

text: msl1 knockout

text: msl1Δ replicate 1


text: University of California, San Francisco

text: live

text: Generic

text: YPAD media

text: Cryptococcus neoformans

text: Yeast

text: msl1 knockout

text: msl1Δ replicate 2


text: University of California, San Francisco

text: live

text: Generic

text: YPAD media

text: Cryptococcus neoformans

text: Yeast

text: ccc1 knockout

text: ccc1Δ replicate 1


text: University of California, San Francisco

text: live

text: Generic

text: YPAD media

text: Cryptococcus neoformans

text: Yeast

text: ccc1 knockout

text: ccc1Δ replicate 2


text: University of California, San Francisco

text: live

text: Generic

text: YPAD media

text: Cryptococcus neoformans

text: Yeast

text: ccc1-w52a mutant

text: ccc1-w52a replicate 1


text: University of California, San Francisco

text: live

text: Generic

text: YPAD media

text: Cryptococcus neoformans

text: Yeast

text: ccc1-w52a mutant

text: ccc1-w52a replicate 2


text: University of California, San Francisco

text: live

text: Generic

text: YPAD media

text: Cryptococcus neoformans

text: Yeast

text: CM18 (wild-type)

text: WT replicate 3


text: University of California, San Francisco

text: live

text: Generic

text: YPAD media

text: Cryptococcus neoformans

text: Yeast

text: CM18 (wild-type)

text: WT replicate 4


text: University of California, San Francisco

text: live

text: Generic

text: YPAD media

text: Cryptococcus neoformans

text: Yeast

text: clr4 knockout

text: clr4Δ replicate 1


text: University of California, San Francisco

text: live

text: Generic

text: YPAD media

text: Cryptococcus neoformans

text: Yeast

text: clr4 knockout

text: clr4Δ replicate 2


text: Computational Biology, School of Biological Sciences, University of East Anglia

text: live

text: Generic

text: Aspergillus fumigatus

text: Chrysovirus infected isolate

text: Fungal mycelia

characteristic: tissue


text: live

text: Generic

text: Aspergillus fumigatus

text: NK virus infected isolate

text: Fungal mycelia


text: live

text: Generic

text: Aspergillus fumigatus

text: Partitivirus infected isolate

text: Fungal mycelia


text: live

text: Generic

text: Aspergillus fumigatus

text: A78 virus-free isolate biological replicate-1

text: Fungal mycelia


text: live

text: Generic

text: Aspergillus fumigatus

text: A78 virus-free isolate biological replicate-2

text: Fungal mycelia


text: live

text: Generic

text: Aspergillus fumigatus

text: A78 virus-infected isolate biological replicate-1

text: Fungal mycelia


text: live

text: Generic

text: Aspergillus fumigatus

text: A78 virus-infected isolate biological replicate-2

text: Fungal mycelia


text: live

text: Generic

text: Aspergillus fumigatus

text: Chrysovirus-free isolate biological replicate-1

text: Fungal mycelia


text: live

text: Generic

text: Aspergillus fumigatus

text: Chrysovirus-free isolate biological replicate-2

text: Fungal mycelia


text: live

text: Generic

text: Aspergillus fumigatus

text: Chrysovirus-infected isolate biological replicate-1

text: Fungal mycelia


text: live

text: Generic

text: Aspergillus fumigatus

text: Chrysovirus-infected isolate biological replicate-2

text: Fungal mycelia


text: live

text: Generic

text: Aspergillus fumigatus

text: NK virus-free isolate biological replicate-1

text: Fungal mycelia


text: live

text: Generic

text: Aspergillus fumigatus

text: NK virus-free isolate biological replicate-2

text: Fungal mycelia


text: live

text: Generic

text: Aspergillus fumigatus

text: NK virus-infected isolate biological replicate-1

text: Fungal mycelia


text: live

text: Generic

text: Aspergillus fumigatus

text: NK virus-infected isolate biological replicate-2

text: Fungal mycelia


text: live

text: Generic

text: Aspergillus fumigatus

text: Partitivirus-free isolate biological replicate-1

text: Fungal mycelia


text: live

text: Generic

text: Aspergillus fumigatus

text: Partitivirus-free isolate biological replicate-2

text: Fungal mycelia


text: live

text: Generic

text: Aspergillus fumigatus

text: Partitivirus-infected isolate biological replicate-1

text: Fungal mycelia


text: live

text: Generic

text: Aspergillus fumigatus

text: Partitivirus-infected isolate biological replicate-2

text: Fungal mycelia


text: environmental-water

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

text: live

text: Pathogen.env

text: FLUFL

characteristic: collected by

characteristic: collection date

text: USA:FL

characteristic: geo loc name

text: river water

characteristic: isolation source

text: river water:ENVO_01000599

characteristic: ontological term

text: Salmonella enterica

text: environmental

text: Pathogen: environmental/food/other sample from Salmonella enterica


characteristic: External Id

text: environmental-water

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Pathogen.env

text: FLUFL

text: USA:FL

text: river water

text: river water:ENVO_01000599

text: Salmonella enterica

characteristic: organism

text: environmental

characteristic: source type

characteristic: title


FL-DACS

text: herbs

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: FLUFL

text: USA:FL

text: cilantro

text: coriander plant:FOODON_03411381

text: Salmonella enterica

text: food

text: FL-DACS


FDA872114 O-1

text: environmental

characteristic: INSDC last update

text: live

text: Pathogen.env

text: FDA

text: 872114 O-1

characteristic: fda lab id

text: USA:KY

text: environmental swab

text: environmental (swab or sampling):GENEPIO_0001732

text: Listeria monocytogenes

text: environmental

text: FDA872114 O-1

characteristic: strain

text: Pathogen: environmental/food/other sample from Listeria monocytogenes


FDA872114 O-6

text: environmental

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

text: FDA

characteristic: collected by

characteristic: collection date

text: 872114 O-6

text: USA:KY

text: environmental swab

text: Listeria monocytogenes

text: environmental

text: FDA872114 O-6


text: dairy

characteristic: IFSAC Category

text: live

text: Pathogen.env

text: FDA

text: France

characteristic: geo loc name

text: raclette lait cru cheese

characteristic: isolation source

text: semihard cheese:FOODON_03316148

characteristic: ontological term

text: Listeria monocytogenes

text: food


characteristic: External Id

text: DOE Joint Genome Institute

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: SRA accession

characteristic: culture-collection

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

characteristic: investigation type

text: Actinokineospora globicatena

characteristic: organism

text: Actinokineospora globicatena

characteristic: project name

text: DSM 44256

text: Actinokineospora globicatena DSM 44256

text: type strain of Actinokineospora globicatena

characteristic: type material


text: DOE Joint Genome Institute

characteristic: INSDC center name

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Keywords: GSC:MIxS;MIGS:6.0

text: Actinosynnema pretiosum

text: Actinosynnema pretiosum

text: DSM 44132

characteristic: strain

text: Actinosynnema pretiosum DSM 44132

characteristic: title

text: type strain of Actinosynnema pretiosum


characteristic: External Id

text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Actinokineospora diospyrosa

text: Actinokineospora diospyrosa

text: DSM 44255

text: Actinokineospora diospyrosa DSM 44255

text: type strain of Actinokineospora diospyrosa


text: Rocky Mountain Laboratories, NIAID, NIH

characteristic: INSDC first public

text: live

text: Generic

characteristic: common name

text: USA

characteristic: geo loc name

text: domestic chicken

characteristic: host

text: blood

characteristic: isolation source

text: Borrelia anserina BA2

text: Sample from Borrelia anserina BA2


text: Chinese Center for Disease Control and Prevention, National Institute for Communicable Disease Control and Prevention

text: live

characteristic: INSDC status

text: Generic

characteristic: Tax ID

characteristic: collection-date

text: China: Zhejiang

characteristic: country

text: feces

characteristic: isolation-source

text: Rattus norvegicus

characteristic: nat-host

text: Yersinia hibernica

text: Sample from Yersinia hibernica


text: Virginia Commonwealth University

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

text: Whole genome sequencing of Mycoplasma hominis retrieved from patients with intra-amniotic infection and premature labor reveals a gene associated with preterm labor and the microbial burden in the amniotic cavity

characteristic: description

text: Homo sapiens

text: mycoplasma broth or agar containing 0.5% arginine, 20% horse serum, 2.5% yeast extract (Oxoid), and 150 ug ampicillin/mL) at 37OC in air supplemented with 5% CO2.

text: Metamycoplasma hominis

characteristic: organism

text: Identification of a gene in Mycoplasma hominis associated with microbial burden in intra-amniotic infection and preterm labor, submitted

text: MIGS Cultured Bacterial/Archaeal sample from Metamycoplasma hominis


text: Virginia Commonwealth University

text: live

text: MIGS/MIMS/MIMARKS.human-associated

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Homo sapiens

text: patients with intra-amniotic infection and premature labor

text: Metamycoplasma hominis

characteristic: strain

characteristic: title


FDA794033 21

characteristic: External Id

text: environmental

characteristic: IFSAC+ Category

characteristic: INSDC first public

text: live

text: Pathogen.env

text: FDA

characteristic: collected by

characteristic: collection date

text: 794033 21

characteristic: fda lab id

text: USA:MN

characteristic: geo loc name

text: environmental swab

characteristic: ontological term

text: Cronobacter sp.

text: environmental

characteristic: source type

text: FDA794033 21

text: Pathogen: environmental/food/other sample from Cronobacter sp.


FDA794033 22

text: environmental

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Pathogen.env

text: FDA

text: 794033 22

text: USA:MN

text: environmental swab

characteristic: isolation source

text: Cronobacter sp.

text: environmental

text: FDA794033 22


FDA794033 39

text: environmental

characteristic: INSDC last update

text: live

text: Pathogen.env

text: FDA

text: 794033 39

text: USA:MN

text: environmental swab

text: Cronobacter sp.

characteristic: organism

text: environmental

text: FDA794033 39


FDA794033 41

text: environmental

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: FDA

text: 794033 41

text: USA:MN

text: environmental swab

text: Cronobacter sp.

text: environmental

text: FDA794033 41


FDA794033 82

text: environmental

text: live

text: Pathogen.env

text: FDA

text: 794033 82

text: USA:MN

text: environmental swab

text: Cronobacter sp.

text: environmental

text: FDA794033 82

characteristic: strain

characteristic: title


FDA794033 83

characteristic: External Id

text: environmental

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

text: FDA

text: 794033 83

text: USA:MN

text: environmental swab

text: Cronobacter sp.

text: environmental

text: FDA794033 83


FDA794033 95

text: environmental

characteristic: INSDC first public

text: live

text: Pathogen.env

text: FDA

characteristic: collected by

text: 794033 95

text: USA:MN

text: environmental swab

text: Cronobacter sp.

text: environmental

text: FDA794033 95


FDA794033 97

text: environmental

text: live

text: Pathogen.env

text: FDA

characteristic: collection date

text: 794033 97

characteristic: fda lab id

text: USA:MN

text: environmental swab

text: Cronobacter sp.

text: environmental

text: FDA794033 97


FDA794033 98

text: environmental

text: live

text: Pathogen.env

text: FDA

text: 794033 98

text: USA:MN

characteristic: geo loc name

text: environmental swab

characteristic: ontological term

text: Cronobacter sp.

text: environmental

text: FDA794033 98


FDA823999 72

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: FDA

text: 823999 72

text: USA:IA

text: environmental sample

text: Cronobacter sp.

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: FDA823999 72


FDA823999 75

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: FDA

text: 823999 75

text: USA:IA

text: environmental sample

characteristic: isolation source

text: Cronobacter sp.

characteristic: organism

text: GenomeTrakr

text: FDA823999 75


FDA833304 70

characteristic: External Id

text: environmental

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: FDA

text: 833304 70

text: USA:ID

text: environmental swab

text: Cronobacter sp.

text: environmental

characteristic: source type

text: FDA833304 70

characteristic: strain

characteristic: title


FDA833305 135

text: environmental

characteristic: INSDC first public

text: live

text: Pathogen.env

text: FDA

characteristic: collected by

characteristic: collection date

text: 833305 135

characteristic: fda lab id

text: USA:ID

characteristic: geo loc name

text: environmental swab

characteristic: ontological term

text: Cronobacter sp.

text: environmental

text: FDA833305 135


FDA833305 98

text: environmental

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Pathogen.env

text: FDA

text: 833305 98

text: USA:ID

text: environmental swab

text: Cronobacter sp.

text: environmental

text: FDA833305 98


FDA833305 99

text: environmental

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: FDA

text: 833305 99

text: USA:ID

text: environmental swab

text: Cronobacter sp.

text: environmental

text: FDA833305 99


FDA841900 30

text: environmental

text: live

text: Pathogen.env

text: FDA

text: 841900 30

text: USA:MN

text: environmental swab

characteristic: isolation source

text: Cronobacter sp.

characteristic: organism

text: environmental

text: FDA841900 30


FDA841900 36

characteristic: External Id

text: environmental

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

text: FDA

text: 841900 36

text: USA:MN

text: environmental swab

text: Cronobacter sp.

text: environmental

text: FDA841900 36


FDA841900 44

text: environmental

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: FDA

text: 841900 44

text: USA:MN

text: environmental swab

text: Cronobacter sp.

text: environmental

characteristic: source type

text: FDA841900 44


FDA841900 62

text: environmental

text: live

text: Pathogen.env

text: FDA

text: 841900 62

text: USA:MN

text: environmental swab

text: Cronobacter sp.

text: environmental

text: FDA841900 62

characteristic: strain

characteristic: title


FDA846689 17

text: environmental

characteristic: INSDC first public

text: live

text: Pathogen.env

text: FDA

characteristic: collected by

text: 846689 17

text: USA:TX

text: environmental swab

text: Cronobacter sp.

text: environmental

text: FDA846689 17


FDA846689 32

text: environmental

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: sakazakii

characteristic: Species

text: FDA

characteristic: collection date

text: 846689 32

characteristic: fda lab id

text: USA:TX

text: environmental swab

text: Cronobacter sakazakii

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: environmental

text: FDA846689 32

text: Pathogen: environmental/food/other sample from Cronobacter sakazakii