text: animal feed

characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: FDA

text: USA:CT

text: pet food dog

text: dog food:FOODON_03302645, pet food:FOODON_00002682

characteristic: ontological term

text: Salmonella enterica

characteristic: organism

text: GenomeTrakr

text: Animal feed

characteristic: source type


WT

status: PUBLIC

characteristic: External Id

text: College of Life Sciences, Nanjing Normal University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: SRA accession

text: Zhendong Cai

tag: attribute

characteristic: collected by

characteristic: collection date

text: Homo sapiens

characteristic: host

text: invasive aspergillosis

characteristic: host disease

text: Fungal Genetics Stock Center

characteristic: isolate

text: Aspergillus fumigatus

text: Wild type

characteristic: strain

text: Pathogen: clinical or host-associated sample from Aspergillus fumigatus

characteristic: title


CpcB

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

text: Zhendong Cai

text: Homo sapiens

text: invasive aspergillosis

text: ?our lab

text: Aspergillus fumigatus

text: cpcB deletion


text: veterinary clinical/research| cow

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: FLFUL

text: USA:FL

characteristic: geo loc name

text: Bos taurus

text: uterus (Bos taurus)

characteristic: isolation source

text: bos taurus:ncbitaxon_9913| uterus:uberon_0000995

characteristic: ontological term

text: Escherichia coli

characteristic: organism

text: animal

text: Pathogen: environmental/food/other sample from Escherichia coli


characteristic: External Id

text: veterinary clinical/research| cow

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FLFUL

text: USA:FL

text: Bos taurus

text: uterus (Bos taurus)

text: Escherichia coli

text: animal

characteristic: source type


text: veterinary clinical/research| cow

text: live

text: Pathogen.env

text: environmental/food/other

text: FLFUL

characteristic: collected by

characteristic: collection date

text: USA:FL

text: Bos taurus

characteristic: host

text: uterus (Bos taurus)

text: Escherichia coli

text: multi-locus sequence type 708

characteristic: serotype

text: animal

characteristic: strain


name: Microbial communities from bioreactor (seeded with sewage sludge) at LBNL, California, USA - Biofuel metagenome 4

text: Engineered | Bioreactor | Anaerobic | Unclassified | Unclassified

characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: description

text: USA: Berkeley, California

text: Bioreactor at Lawrence Berkeley National Laboratory, USA, seeded with sewage sludge

text: 37.8754404 N 122.2477251 W

characteristic: lat lon

text: bioreactor metagenome

text: Metagenome or environmental sample from bioreactor metagenome

characteristic: title


characteristic: External Id

text: Texas A&M University

characteristic: INSDC center name

text: live

text: Human

characteristic: NCBI submission package

characteristic: age

text: Dr. Robert Chapkin, Texas A&M University, College Station, Texas

characteristic: biomaterial provider

characteristic: isolate

text: Homo sapiens

characteristic: organism

characteristic: phase

characteristic: replicate

text: male

characteristic: sex

text: colon

characteristic: tissue

text: 6102 rectal epithelium phase 1

text: placebo

characteristic: treatment


text: Texas A&M University

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Human

characteristic: SRA accession

text: Homo sapiens

text: male

text: colon

text: 6102 rectal stroma phase 1

text: placebo


characteristic: External Id

text: Texas A&M University

text: live

text: Human

characteristic: NCBI submission model

text: Homo sapiens

text: male

text: colon

text: 6102 sigmoid epithelium phase 1

characteristic: title

text: placebo


text: Texas A&M University

characteristic: INSDC center name

text: live

text: Human

characteristic: NCBI submission package

characteristic: age

text: Homo sapiens

text: male

text: colon

text: 6102 sigmoid stroma phase 1

text: placebo


text: Texas A&M University

text: live

text: Human

characteristic: biomaterial provider

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: male

text: colon

text: 6102 rectal epithelium phase 2

text: lignan


text: Texas A&M University

text: live

text: Human

text: Homo sapiens

characteristic: phase

characteristic: replicate

text: male

characteristic: sex

text: colon

text: 6102 rectal stroma phase 2

text: lignan


text: Texas A&M University

characteristic: INSDC first public

text: live

text: Human

text: Homo sapiens

text: male

text: colon

characteristic: tissue

text: 6102 sigmoid epithelium phase 2

text: lignan

characteristic: treatment


text: Texas A&M University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Human

text: Homo sapiens

text: male

text: colon

text: 6102 sigmoid stroma phase 2

text: lignan


characteristic: External Id

text: Texas A&M University

text: live

text: Human

characteristic: NCBI submission model

characteristic: SRA accession

text: Homo sapiens

text: female

text: colon

text: 6103 rectal epithelium phase 1

text: placebo


text: Texas A&M University

characteristic: INSDC center name

text: live

text: Human

characteristic: NCBI submission package

text: Homo sapiens

text: female

text: colon

text: 6103 rectal stroma phase 1

characteristic: title

text: placebo


text: Texas A&M University

text: live

text: Human

characteristic: age

characteristic: biomaterial provider

characteristic: isolate

text: Homo sapiens

text: female

text: colon

text: 6103 sigmoid epithelium phase 1

text: placebo


text: Texas A&M University

text: live

text: Human

text: Homo sapiens

characteristic: organism

characteristic: phase

characteristic: replicate

text: female

text: colon

text: 6103 sigmoid stroma phase 1

text: placebo


text: Texas A&M University

characteristic: INSDC first public

text: live

text: Human

text: Homo sapiens

text: female

characteristic: sex

text: colon

characteristic: tissue

text: 6103 rectal epithelium phase 2

text: lignan


text: Texas A&M University

characteristic: INSDC last update

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text: live

text: Human

text: Homo sapiens

text: female

text: colon

text: 6103 rectal stroma phase 2

text: lignan

characteristic: treatment


characteristic: External Id

text: Texas A&M University

text: live

characteristic: INSDC status

text: Human

characteristic: NCBI submission model

text: Homo sapiens

text: female

text: colon

text: 6103 sigmoid epithelium phase 2

text: lignan


text: Texas A&M University

characteristic: INSDC center name

text: live

text: Human

characteristic: NCBI submission package

characteristic: SRA accession

text: Homo sapiens

text: female

text: colon

text: 6103 sigmoid stroma phase 2

text: lignan


text: Texas A&M University

text: live

text: Human

characteristic: age

characteristic: biomaterial provider

text: Homo sapiens

text: male

text: colon

text: 6106 rectal epithelium phase 1

characteristic: title

text: lignan


text: Texas A&M University

text: live

text: Human

characteristic: isolate

text: Homo sapiens

characteristic: organism

characteristic: phase

text: male

text: colon

text: 6106 rectal stroma phase 1

text: lignan


text: Texas A&M University

characteristic: INSDC first public

text: live

text: Human

text: Homo sapiens

characteristic: replicate

text: male

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text: colon

text: 6106 sigmoid epithelium phase 1

text: lignan


text: Texas A&M University

characteristic: INSDC last update

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text: live

text: Human

text: Homo sapiens

text: male

text: colon

characteristic: tissue

text: 6106 sigmoid stroma phase 1

text: lignan


characteristic: External Id

text: Texas A&M University

text: live

characteristic: INSDC status

text: Human

text: Homo sapiens

text: male

text: colon

text: 6106 rectal epithelium phase 2

text: placebo

characteristic: treatment


text: Texas A&M University

characteristic: INSDC center name

text: live

text: Human

characteristic: NCBI submission model

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text: Homo sapiens

text: male

text: colon

text: 6106 rectal stroma phase 2

text: placebo


text: Texas A&M University

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text: Human

characteristic: SRA accession

characteristic: age

characteristic: biomaterial provider

text: Homo sapiens

text: male

text: colon

text: 6106 sigmoid epithelium phase 2

text: placebo


text: Texas A&M University

text: live

text: Human

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: male

text: colon

text: 6106 sigmoid stroma phase 2

characteristic: title

text: placebo


text: Texas A&M University

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text: live

text: Human

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characteristic: phase

characteristic: replicate

text: male

text: colon

text: 6108 rectal epithelium phase 1

text: placebo


text: Texas A&M University

characteristic: INSDC last update

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text: live

text: Human

text: Homo sapiens

text: male

characteristic: sex

text: colon

text: 6108 rectal stroma phase 1

text: placebo


characteristic: External Id

text: Texas A&M University

text: live

characteristic: INSDC status

text: Human

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text: male

text: colon

characteristic: tissue

text: 6108 sigmoid epithelium phase 1

text: placebo


text: Texas A&M University

characteristic: INSDC center name

text: live

text: Human

characteristic: NCBI submission model

text: Homo sapiens

text: male

text: colon

text: 6108 sigmoid stroma phase 1

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characteristic: treatment


text: Texas A&M University

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text: Human

characteristic: NCBI submission package

characteristic: SRA accession

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text: Homo sapiens

text: male

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text: 6108 rectal epithelium phase 2

text: lignan


text: Texas A&M University

text: live

text: Human

characteristic: biomaterial provider

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: male

text: colon

text: 6108 rectal stroma phase 2

text: lignan


text: Texas A&M University

characteristic: INSDC first public

text: live

text: Human

text: Homo sapiens

characteristic: phase

text: male

text: colon

text: 6108 sigmoid epithelium phase 2

characteristic: title

text: lignan


text: Texas A&M University

characteristic: INSDC last update

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text: live

text: Human

text: Homo sapiens

characteristic: replicate

text: male

text: colon

text: 6108 sigmoid stroma phase 2

text: lignan


characteristic: External Id

text: Texas A&M University

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characteristic: INSDC status

text: Human

text: Homo sapiens

text: female

characteristic: sex

text: colon

text: 6105 rectal epithelium phase 1

text: lignan


text: Texas A&M University

characteristic: INSDC center name

text: live

text: Human

characteristic: NCBI submission model

text: Homo sapiens

text: female

text: colon

characteristic: tissue

text: 6105 rectal stroma phase 1

text: lignan


text: Texas A&M University

text: live

text: Human

characteristic: NCBI submission package

characteristic: SRA accession

text: Homo sapiens

text: female

text: colon

text: 6105 sigmoid epithelium phase 1

text: lignan

characteristic: treatment


text: Texas A&M University

text: live

text: Human

characteristic: age

characteristic: biomaterial provider

characteristic: isolate

text: Homo sapiens

text: female

text: colon

text: 6105 sigmoid stroma phase 1

text: lignan


text: Texas A&M University

characteristic: INSDC first public

text: live

text: Human

text: Homo sapiens

characteristic: organism

characteristic: phase

text: female

text: colon

text: 6105 rectal epithelium phase 2

text: placebo


text: Texas A&M University

characteristic: INSDC last update

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text: Human

text: Homo sapiens

text: female

text: colon

text: 6105 rectal stroma phase 2

characteristic: title

text: placebo


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text: Texas A&M University

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text: female

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text: Texas A&M University

characteristic: INSDC center name

text: live

text: Human

characteristic: NCBI submission model

text: Homo sapiens

text: female

characteristic: sex

text: colon

text: 6105 sigmoid stroma phase 2

text: placebo


text: Texas A&M University

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text: Human

characteristic: NCBI submission package

characteristic: SRA accession

text: Homo sapiens

text: female

text: colon

characteristic: tissue

text: 6110 rectal epithelium phase 1

text: placebo


text: Texas A&M University

text: live

text: Human

characteristic: age

characteristic: biomaterial provider

text: Homo sapiens

text: female

text: colon

text: 6110 rectal stroma phase 1

text: placebo

characteristic: treatment


text: Texas A&M University

characteristic: INSDC first public

text: live

text: Human

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: female

text: colon

text: 6110 sigmoid epithelium phase 1

text: placebo


text: Texas A&M University

characteristic: INSDC last update

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text: live

text: Human

text: Homo sapiens

characteristic: phase

text: female

text: colon

text: 6110 sigmoid stroma phase 1

text: placebo


characteristic: External Id

text: Texas A&M University

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characteristic: INSDC status

text: Human

text: Homo sapiens

text: female

text: colon

text: 6110 rectal epithelium phase 2

characteristic: title

text: lignan


text: Texas A&M University

characteristic: INSDC center name

text: live

text: Human

characteristic: NCBI submission model

text: Homo sapiens

characteristic: replicate

text: female

text: colon

text: 6110 rectal stroma phase 2

text: lignan


text: Texas A&M University

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text: Human

characteristic: NCBI submission package

characteristic: SRA accession

text: Homo sapiens

text: female

characteristic: sex

text: colon

text: 6110 sigmoid epithelium phase 2

text: lignan


text: Texas A&M University

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text: Human

characteristic: age

characteristic: biomaterial provider

text: Homo sapiens

text: female

text: colon

characteristic: tissue

text: 6110 sigmoid stroma phase 2

text: lignan


text: Texas A&M University

characteristic: INSDC first public

text: live

text: Human

characteristic: isolate

text: Homo sapiens

text: male

text: colon

text: 6121 rectal epithelium phase 1

text: lignan

characteristic: treatment


text: Texas A&M University

characteristic: INSDC last update

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text: live

text: Human

text: Homo sapiens

characteristic: organism

text: male

text: colon

text: 6121 rectal stroma phase 1

text: lignan


characteristic: External Id

text: Texas A&M University

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characteristic: INSDC status

text: Human

text: Homo sapiens

characteristic: phase

text: male

text: colon

text: 6121 sigmoid epithelium phase 1

text: lignan


text: Texas A&M University

characteristic: INSDC center name

text: live

text: Human

characteristic: NCBI submission model

text: Homo sapiens

text: male

text: colon

text: 6121 sigmoid stroma phase 1

characteristic: title

text: lignan


text: Texas A&M University

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characteristic: NCBI submission package

characteristic: SRA accession

text: Homo sapiens

characteristic: replicate

text: male

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text: 6121 rectal epithelium phase 2

text: placebo


text: Texas A&M University

text: live

text: Human

characteristic: age

characteristic: biomaterial provider

text: Homo sapiens

text: male

characteristic: sex

text: colon

text: 6121 rectal stroma phase 2

text: placebo


text: Texas A&M University

characteristic: INSDC first public

text: live

text: Human

characteristic: isolate

text: Homo sapiens

text: male

text: colon

characteristic: tissue

text: 6121 sigmoid epithelium phase 2

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text: Texas A&M University

characteristic: INSDC last update

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text: Human

text: Homo sapiens

text: male

text: colon

text: 6121 sigmoid stroma phase 2

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characteristic: treatment


characteristic: External Id

text: Texas A&M University

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characteristic: INSDC status

text: Human

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characteristic: organism

text: male

text: colon

text: 6122 rectal epithelium phase 1

text: lignan


text: Texas A&M University

characteristic: INSDC center name

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characteristic: NCBI submission model

text: Homo sapiens

characteristic: phase

text: male

text: colon

text: 6122 rectal stroma phase 1

text: lignan


text: Texas A&M University

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text: Human

characteristic: NCBI submission package

characteristic: SRA accession

text: Homo sapiens

text: male

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characteristic: title

text: lignan


text: Texas A&M University

text: live

text: Human

characteristic: age

characteristic: biomaterial provider

text: Homo sapiens

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text: male

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text: 6122 sigmoid stroma phase 1

text: lignan


text: Texas A&M University

characteristic: INSDC first public

text: live

text: Human

characteristic: isolate

text: Homo sapiens

text: male

characteristic: sex

text: colon

text: 6122 rectal epithelium phase 2

text: placebo


text: Texas A&M University

characteristic: INSDC last update

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text: Human

text: Homo sapiens

text: male

text: colon

characteristic: tissue

text: 6122 rectal stroma phase 2

text: placebo


characteristic: External Id

text: Texas A&M University

text: live

characteristic: INSDC status

text: Human

text: Homo sapiens

text: male

text: colon

text: 6122 sigmoid epithelium phase 2

text: placebo

characteristic: treatment


text: Texas A&M University

characteristic: INSDC center name

text: live

text: Human

characteristic: NCBI submission model

text: Homo sapiens

characteristic: organism

text: male

text: colon

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text: placebo


text: Texas A&M University

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text: Human

characteristic: NCBI submission package

characteristic: SRA accession

text: Homo sapiens

characteristic: phase

text: female

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text: 6123 rectal epithelium phase 1

text: placebo


text: Texas A&M University

text: live

text: Human

characteristic: age

characteristic: biomaterial provider

text: Homo sapiens

text: female

text: colon

text: 6123 rectal stroma phase 1

characteristic: title

text: placebo


text: Texas A&M University

characteristic: INSDC first public

text: live

text: Human

characteristic: isolate

text: Homo sapiens

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text: female

text: colon

text: 6123 sigmoid epithelium phase 1

text: placebo


text: Texas A&M University

characteristic: INSDC last update

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text: live

text: Human

text: Homo sapiens

text: female

characteristic: sex

text: colon

text: 6123 sigmoid stroma phase 1

text: placebo


characteristic: External Id

text: Texas A&M University

text: live

characteristic: INSDC status

text: Human

text: Homo sapiens

text: female

text: colon

characteristic: tissue

text: 6123 rectal stroma phase 2

text: lignan


text: Texas A&M University

characteristic: INSDC center name

text: live

text: Human

characteristic: NCBI submission model

text: Homo sapiens

text: female

text: colon

text: 6123 sigmoid stroma phase 2

text: lignan

characteristic: treatment


text: Texas A&M University

text: live

text: Human

characteristic: NCBI submission package

characteristic: SRA accession

text: Homo sapiens

characteristic: organism

text: male

text: colon

text: 6127 rectal epithelium phase 1

text: lignan


text: Texas A&M University

text: live

text: Human

characteristic: age

characteristic: biomaterial provider

text: Homo sapiens

characteristic: phase

text: male

text: colon

text: 6127 rectal stroma phase 1

text: lignan


text: Texas A&M University

characteristic: INSDC first public

text: live

text: Human

characteristic: isolate

text: Homo sapiens

text: male

text: colon

text: 6127 sigmoid epithelium phase 1

characteristic: title

text: lignan


text: Texas A&M University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Human

text: Homo sapiens

characteristic: replicate

text: male

text: colon

text: 6127 sigmoid stroma phase 1

text: lignan


characteristic: External Id

text: Texas A&M University

text: live

characteristic: INSDC status

text: Human

text: Homo sapiens

text: male

characteristic: sex

text: colon

text: 6127 rectal epithelium phase 2

text: placebo


text: Texas A&M University

characteristic: INSDC center name

text: live

text: Human

characteristic: NCBI submission model

text: Homo sapiens

text: male

text: colon

characteristic: tissue

text: 6127 rectal stroma phase 2

text: placebo


text: Texas A&M University

text: live

text: Human

characteristic: NCBI submission package

characteristic: SRA accession

text: Homo sapiens

text: male

text: colon

text: 6127 sigmoid epithelium phase 2

text: placebo

characteristic: treatment


text: Texas A&M University

text: live

text: Human

characteristic: age

characteristic: biomaterial provider

text: Homo sapiens

characteristic: organism

text: male

text: colon

text: 6127 sigmoid stroma phase 2

text: placebo


characteristic: INSDC first public

text: live

text: Pathogen.cl

text: Yanfei Chai

characteristic: collected by

characteristic: collection date

text: Homo sapiens

characteristic: host

text: invasive aspergillosis

characteristic: host disease

text: Fungal Genetics Stock Center

characteristic: isolate

text: Aspergillus fumigatus

characteristic: strain


AfcpcB deletion mutant

characteristic: External Id

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

text: Yanfei Chai

text: Homo sapiens

text: invasive aspergillosis

text: Ling Lu's lab

text: Aspergillus fumigatus

characteristic: title


text: multi-ingredient

characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: FDA

characteristic: fda lab id

text: India

characteristic: geo loc name

text: food

characteristic: isolation source

characteristic: ontological term

text: Salmonella enterica

text: environmental/food/other

characteristic: package

text: GenomeTrakr

characteristic: project name

text: United States Food and Drug Administration|Office of Regulatory Affairs|Northeast Food and Feed Laboratory

characteristic: sequenced by

text: food

characteristic: source type

text: Pathogen: environmental/food/other sample from Salmonella enterica


characteristic: External Id

text: Universidade de Aveiro

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.plant-associated

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Saltmarsh

characteristic: env biome

text: saline hydrographic feature

characteristic: env feature

text: Halimione portulacoides surface

text: Portugal

text: Atriplex portulacoides

characteristic: host

text: Tryptic Soy Agar

text: 40 N 8 W

characteristic: lat lon

text: Pseudomonas aeruginosa

characteristic: organism

text: unpublished

text: high salinity

characteristic: strain

text: MIGS Cultured Bacterial sample from Pseudomonas aeruginosa


name: Mock Community metagenome - combining DNA samples from 23 bacterial and 3 archaeal organisms.

text: Engineered | Modeled | Simulated communities (microbial mixture) | Unclassified | Unclassified

characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: This is a mock metagenome community generated by combining DNA samples from 23 bacterial and 3 archaeal organisms with the primary aim to benchmark various aspects of metagenomics.

text: Mock community

characteristic: isolation source

text: synthetic metagenome

characteristic: title


characteristic: External Id

text: fruits

characteristic: IFSAC+ Category

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA

characteristic: collected by

characteristic: collection date

text: USA:PA

characteristic: geo loc name

text: snow king intact peach

text: peach (whole, raw):foodon_03301719

characteristic: ontological term

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: food

characteristic: source type

text: Pathogen: environmental/food/other sample from Listeria monocytogenes


text: fruits

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: FDA

text: USA:PA

text: snow king peach

text: peach (whole, raw):foodon_03301719

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

text: food

characteristic: strain


text: environmental-water

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: NC State University

text: USA:NC

text: irrigation water

characteristic: isolation source

text: water:chebi_15377| irrigation process:agro_00000006

text: Listeria monocytogenes

text: GenomeTrakr

text: environmental


characteristic: External Id

text: Massey University

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: New Zealand: Palmerston North

text: culture

text: Epichloe typhina

text: cell culture

characteristic: sample type

text: Microbe sample from Epichloe typhina

characteristic: title


text: Health Canada

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.cl

text: Health Canada

characteristic: collected by

characteristic: collection date

text: Pathogen: clinical or host-associated sample from Vibrio parahaemolyticus

characteristic: description

text: Canada: Ontario

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: gastroenteritis

characteristic: host disease

text: clinical sample from patient with gastroenteritis

text: Vibrio parahaemolyticus

characteristic: serotype


text: Health Canada

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

text: Health Canada

text: Canada: Alberta

text: Homo sapiens

text: gastroenteritis

text: Vibrio parahaemolyticus

characteristic: organism

characteristic: strain


characteristic: External Id

text: Health Canada

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: NCBI submission package

characteristic: SRA accession

text: Health Canada

text: Canada: Prince Edward Island

text: Homo sapiens

text: gastroenteritis

characteristic: isolation source

text: Vibrio parahaemolyticus


text: environmental

characteristic: IFSAC+ Category

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: Dept. Vet. Sciences, UNITO

characteristic: collected by

text: Italy

text: environment

text: environmental system:ENVO_01000254

characteristic: ontological term

text: Listeria welshimeri

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: environmental

characteristic: source type

text: Pathogen: environmental/food/other sample from Listeria welshimeri

characteristic: title


text: multi-ingredient, pork

characteristic: IFSAC Category

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: Dept. Vet. Sciences, UNITO

characteristic: collection date

text: Italy

characteristic: geo loc name

text: swine salami

text: swine:FOODON_03411136, salami:FOODON_03312067

text: Listeria innocua

text: environmental/food/other

characteristic: package

text: GenomeTrakr

text: food

text: Pathogen: environmental/food/other sample from Listeria innocua


characteristic: External Id

text: pork

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: Dept. Vet. Sciences, UNITO

text: Italy

text: swine meat

characteristic: isolation source

text: swine:FOODON_03411136, meat food product:FOODON_00001006

text: Listeria innocua

characteristic: organism

text: environmental/food/other

text: GenomeTrakr

text: food

characteristic: strain


text: beef

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: Dept. Vet. Sciences, UNITO

characteristic: collected by

text: Italy

text: bovine minced meat

text: bovine meat food product:FOODON_00001134, meat minced:FOODON_03315526

characteristic: ontological term

text: Listeria innocua

text: environmental/food/other

text: GenomeTrakr

text: food


text: live

text: Pathogen.env

text: environmental/food/other

text: Dept. Vet. Sciences, UNITO

text: Italy

text: environment (slicer)

text: Listeria innocua

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

characteristic: title


characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: Dept. Vet. Sciences, UNITO

text: Italy

text: environment (cutting board - bovine)

text: Listeria innocua

text: GenomeTrakr


text: beef

characteristic: IFSAC Category

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: Dept. Vet. Sciences, UNITO

characteristic: collection date

text: Italy

text: bovine meat

text: bovine meat food product:FOODON_00001134

text: Listeria innocua

text: environmental/food/other

text: GenomeTrakr

text: food

characteristic: source type


characteristic: External Id

text: beef

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: Dept. Vet. Sciences, UNITO

text: Italy

characteristic: geo loc name

text: bovine meat

text: Listeria welshimeri

text: environmental/food/other

characteristic: package

text: GenomeTrakr

text: food


characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: Dept. Vet. Sciences, UNITO

text: Italy

text: environment (cutting board - poultry)

characteristic: isolation source

text: Listeria welshimeri

characteristic: organism

text: GenomeTrakr

characteristic: strain


characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: Dept. Vet. Sciences, UNITO

characteristic: collected by

text: Italy

text: environment (cutting board -bovine)

text: Listeria innocua

text: GenomeTrakr

characteristic: project name


text: meat

characteristic: INSDC center name

text: live

text: Pathogen.env

text: environmental/food/other

text: Dept. Vet. Sciences, UNITO

text: Italy

text: meat

text: meat food product:FOODON_00001006

characteristic: ontological term

text: Listeria innocua

text: environmental/food/other

text: GenomeTrakr

characteristic: sequenced by

text: food

characteristic: title


text: meat

characteristic: IFSAC Category

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: Dept. Vet. Sciences, UNITO

characteristic: collection date

text: Italy

text: meat

text: meat food product:FOODON_00001006

text: Listeria welshimeri

text: environmental/food/other

text: GenomeTrakr

text: food


characteristic: External Id

text: fish

characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: IZS Torino

text: Italy

characteristic: geo loc name

text: salmon

text: salmon food product:foodon_00002220

text: Listeria monocytogenes

text: environmental/food/other

text: GenomeTrakr

text: food

characteristic: source type


text: multi-ingredient| beef| pork

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: IZS Torino

characteristic: collected by

text: Italy

text: swine frankfurter

characteristic: isolation source

text: swine:FOODON_03411136| frankfurter:FOODON_03302012

text: Listeria monocytogenes

characteristic: organism

text: environmental/food/other

characteristic: package

text: GenomeTrakr

text: food

characteristic: strain


text: multi-ingredient, beef, pork

characteristic: IFSAC Category

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: IZS Torino

text: Italy

text: swine frankfurter

text: swine:FOODON_03411136, frankfurter:FOODON_03302012

characteristic: ontological term

text: Listeria seeligeri

text: environmental/food/other

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: food

text: Pathogen: environmental/food/other sample from Listeria seeligeri

characteristic: title


characteristic: External Id

text: multi-ingredient| grains

characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: IZS Torino

characteristic: collection date

text: Italy

text: filled pasta

text: food (filled):FOODON_00002644| pasta:FOODON_03306347

text: Listeria monocytogenes

text: environmental/food/other

text: GenomeTrakr

text: food


text: multi-ingredient, pork

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: IZS Torino

characteristic: collected by

text: Italy

characteristic: geo loc name

text: swine sausage

characteristic: isolation source

text: swine sausage:FOODON_00002306

text: Listeria welshimeri

characteristic: organism

text: environmental/food/other

text: GenomeTrakr

text: food

characteristic: source type


text: Chinese Academy of Agricultural Sciences

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: Guishan Zhang

characteristic: biomaterial provider

text: Guishan Zhang

text: saline-alkaline soil

characteristic: env biome

text: China: Tian Jin City

text: saline-alkaline soil

text: Guishan Zhang

characteristic: identified by

text: saline-alkaline soil

text: Guyparkeria sp. WRN-7

text: 100 gram

text: saline-alkaline soil

characteristic: sample type

characteristic: strain

text: 35 centigrade

characteristic: temp

text: Microbe sample from Guyparkeria sp. WRN-7


Dhan 68

characteristic: External Id

text: University of Nebraska-Lincoln

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: USA: Wisconsin

text: Queso Authentico cheese

text: Debaryomyces hansenii

text: Pure culture

text: Dhan 68

text: Microbe sample from Debaryomyces hansenii

characteristic: title


Dhan 72

text: University of Nebraska-Lincoln

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: USA: Wisconsin

characteristic: geo loc name

text: Colby cheese

characteristic: isolation source

text: Debaryomyces hansenii

text: Pure culture

text: Dhan 72


Dhan 76

text: University of Nebraska-Lincoln

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: USA: Wisconsin

text: Cheddar cheese

text: Debaryomyces hansenii

characteristic: organism

text: Pure culture

text: Dhan 76


Dhan 220

text: University of Nebraska-Lincoln

text: live

text: Microbe, viral or environmental

text: Italy

text: Italian Bel Paese cheese

text: Debaryomyces hansenii

text: Pure culture

characteristic: sample type

text: Dhan 220


text: University of Nebraska-Lincoln

text: live

text: Microbe, viral or environmental

text: Italy

text: Italian Bel Paese cheese

text: Debaryomyces hansenii

text: Pure culture

characteristic: strain


Dhan 242

text: University of Nebraska-Lincoln

text: live

text: Microbe, viral or environmental

text: Italy

text: Parmesan cheese

text: Debaryomyces hansenii

text: Pure culture

text: Dhan 242


Dhan 246

text: University of Nebraska-Lincoln

text: live

text: Microbe, viral or environmental

text: USA: Wisconsin

text: Raclette cheese

text: Debaryomyces hansenii

text: Pure culture

text: Dhan 246


Dhan 274

text: University of Nebraska-Lincoln

text: live

text: Microbe, viral or environmental

text: USA: Wisconsin

text: Blue cheese

text: Debaryomyces hansenii

text: Pure culture

text: Dhan 274


Dhan 276

text: University of Nebraska-Lincoln

text: live

text: Microbe, viral or environmental

text: USA: Wisconsin

text: Blue cheese

text: Debaryomyces hansenii

text: Pure culture

text: Dhan 276


text: Health Canada

text: live

text: Pathogen.cl

text: Health Canada

characteristic: collected by

characteristic: description

text: Canada: British Columbia

text: Homo sapiens

characteristic: host

text: gastroenteritis

characteristic: host disease

text: Vibrio parahaemolyticus

characteristic: serotype


characteristic: External Id

text: University of Georgia

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Chicken isolate

text: Australia

text: Chicken

text: Mycoplasmoides gallisepticum

text: Whole organism

text: Mycoplasma gallisepticum


text: vegetable row crops (leafy)

characteristic: IFSAC Category

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: Isolate name alias

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:CA

text: leafy green

text: leafy vegetable:FOODON_03411566

characteristic: ontological term

text: Escherichia coli

text: environmental/food/other

characteristic: package

text: food

characteristic: source type

text: Pathogen: environmental/food/other sample from Escherichia coli

characteristic: title


text: vegetable row crops (leafy)

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

characteristic: collection date

text: USA:CA

characteristic: geo loc name

text: kale

characteristic: isolation source

text: kale leaf (raw):FOODON_03304859

text: Escherichia coli

characteristic: organism

text: environmental/food/other

text: food

characteristic: strain


characteristic: External Id

text: beef

characteristic: IFSAC Category

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:MN

text: beef

text: beef food product:FOODON_00001041

text: Escherichia coli

text: environmental/food/other

text: food


text: vegetables

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: Isolate name alias

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:WA

text: vegetable

text: vegetable food product:FOODON_00001261

text: Escherichia coli

text: environmental/food/other

text: food


text: vegetables

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:WA

text: vegetable

text: vegetable food product:FOODON_00001261

characteristic: ontological term

text: Escherichia coli

text: environmental/food/other

characteristic: package

text: food


text: beef

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:NE

text: beef

text: beef food product:FOODON_00001041

text: Escherichia coli

text: environmental/food/other

text: food

characteristic: source type

characteristic: title


text: pork

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA

characteristic: collected by

characteristic: collection date

text: Thailand

characteristic: geo loc name

text: NK 45.1

text: pork

characteristic: isolation source

text: pork meat food product:FOODON_00001038

text: Salmonella enterica

characteristic: organism

text: environmental/food/other

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: Sao

characteristic: serovar

text: food

text: Pathogen: environmental/food/other sample from Salmonella enterica


characteristic: External Id

text: pork

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: FDA

text: Thailand

text: NK 46.1

text: pork

text: pork meat food product:FOODON_00001038

text: Salmonella enterica

text: environmental/food/other

text: GenomeTrakr

text: food

characteristic: strain


text: pork

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FDA

text: Thailand

text: pork

text: pork meat food product:FOODON_00001038

characteristic: ontological term

text: Salmonella enterica

text: environmental/food/other

characteristic: package

text: GenomeTrakr

text: Urbana

text: food

characteristic: source type

characteristic: title


text: pork

characteristic: IFSAC Category

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA

characteristic: collected by

characteristic: collection date

text: Thailand

characteristic: geo loc name

text: pork

characteristic: isolation source

text: pork meat food product:FOODON_00001038

text: Salmonella enterica

characteristic: organism

text: environmental/food/other

text: Give

text: food


characteristic: External Id

text: pork

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA

text: Thailand

text: pork

text: pork meat food product:FOODON_00001038

text: Salmonella enterica

text: environmental/food/other

text: derby

characteristic: serovar

text: food


text: pork

characteristic: INSDC center name

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: FDA

text: Thailand

text: pork

text: pork meat food product:FOODON_00001038

text: Salmonella enterica

text: environmental/food/other

text: Kedougou

text: food

characteristic: strain


text: pork

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: FDA

text: Thailand

text: pork

text: pork meat food product:FOODON_00001038

characteristic: ontological term

text: Salmonella enterica

text: environmental/food/other

characteristic: package

text: Rissen

text: food


text: pork

characteristic: IFSAC Category

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA

text: Thailand

text: pork

text: pork meat food product:FOODON_00001038

text: Salmonella enterica

text: environmental/food/other

text: Typhimurium

text: food

characteristic: source type

characteristic: title


text: pork

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA

characteristic: collected by

characteristic: collection date

text: Thailand

characteristic: geo loc name

text: pork

text: pork meat food product:FOODON_00001038

text: Salmonella enterica

text: environmental/food/other

text: Stanley

text: food


characteristic: External Id

text: pork

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA

text: Thailand

text: pork

characteristic: isolation source

text: pork meat food product:FOODON_00001038

text: Salmonella enterica

characteristic: organism

text: environmental/food/other

text: Weltevreden

text: food


text: pork

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA

text: Thailand

text: pork

text: pork meat food product:FOODON_00001038

text: Salmonella enterica

text: environmental/food/other

text: Anatum

characteristic: serovar

text: food


text: pork

characteristic: INSDC center name

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: FDA

text: Thailand

text: pork

text: pork meat food product:FOODON_00001038

text: Salmonella enterica

text: environmental/food/other

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: Anatum

text: food


text: pork

characteristic: IFSAC Category

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: FDA

text: Thailand

text: pork

text: pork meat food product:FOODON_00001038

characteristic: ontological term

text: Salmonella enterica

text: environmental/food/other

characteristic: package

text: GenomeTrakr

text: Stanley

text: food

characteristic: strain


text: pork

characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FDA

characteristic: collected by

characteristic: collection date

text: Thailand

characteristic: geo loc name

text: MH 26.1

text: pork

text: pork meat food product:FOODON_00001038

text: Salmonella enterica

text: environmental/food/other

text: GenomeTrakr

text: Rissen

text: food

characteristic: source type

characteristic: title


characteristic: External Id

text: pork

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: FDA

text: Thailand

text: pork

characteristic: isolation source

text: pork meat food product:FOODON_00001038

text: Salmonella enterica

characteristic: organism

text: environmental/food/other

text: GenomeTrakr

text: Typhimurium

characteristic: serovar

text: food


text: pork

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: FDA

text: Thailand

text: pork

text: pork meat food product:FOODON_00001038

characteristic: ontological term

text: Salmonella enterica

text: environmental/food/other

characteristic: package

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: Saintpaul

text: food

characteristic: strain


text: Shenyang Agriculture University

characteristic: INSDC secondary accession

text: live

text: Plant

characteristic: SRA accession

text: 60 days

characteristic: age

characteristic: cultivar

text: China

characteristic: geo loc name

text: Chrysanthemum x morifolium

text: leaf

characteristic: tissue

text: Plant sample from Chrysanthemum x morifolium


characteristic: External Id

text: Health Canada

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.cl

characteristic: NCBI submission model

text: Health Canada

characteristic: collected by

characteristic: collection date

text: Pathogen: clinical or host-associated sample from Vibrio parahaemolyticus

characteristic: description

text: Canada: Saskatchewan

text: Homo sapiens

characteristic: host

text: gastroenteritis

characteristic: host disease

text: clinical sample from patient with gastroenteritis

text: Vibrio parahaemolyticus

characteristic: serotype

characteristic: title


text: Health Canada

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission package

characteristic: SRA accession

text: Health Canada

text: Canada: Alberta

text: Homo sapiens

text: gastroenteritis

characteristic: isolation source

text: Vibrio parahaemolyticus

characteristic: organism

characteristic: strain


characteristic: External Id

text: Health Canada

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.cl

text: Health Canada

text: Canada: British Columbia

characteristic: geo loc name

text: Homo sapiens

text: gastroenteritis

text: Vibrio parahaemolyticus


text: University of Florida

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: phytopathogenic Streptomyces isolates of diverse geographical origins were sequenced to study the evolution of pathogenicity

text: Egypt

text: potato

text: Streptomyces caniscabiei

text: Microbe sample from Streptomyces sp. 96-12


text: Laboratory of Molecular Immunology, Immunology, Virology and Microbiology, The Rockefeller University

text: live

text: Generic

text: CD4 T cells

characteristic: cell type

text: spleen and lymphnodes

characteristic: organ

text: Mus musculus

text: naïve OT-II CD4 T cells

text: C57BL/6 CD45.1 OT-II


text: Moscat and Diaz-Meco, Pathology and Laboratory Medicine, WEILL CORNELL MEDICINE

text: live

text: Generic

characteristic: background strain

text: p62f/f mice Cre negative - WT

characteristic: genotype/variation

text: Mus musculus

text: Liver

text: Liver

characteristic: tissue

text: p62f/f mice Cre negative - WT 1


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: p62f/f mice Cre negative - WT

text: Mus musculus

text: Liver

text: Liver

text: p62f/f mice Cre negative - WT 2

characteristic: title


text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: p62f/f mice Cre negative - WT

text: Mus musculus

text: Liver

text: Liver

text: p62f/f mice Cre negative - WT 3


text: live

text: Generic

text: Mus musculus

characteristic: organism

text: Liver

text: Liver

text: p62f/f mice AlbCre positive - Specific deletion of p62 in hepatocytes 1


characteristic: External Id

text: live

text: Generic

text: Mus musculus

text: Liver

text: Liver

text: p62f/f mice AlbCre positive - Specific deletion of p62 in hepatocytes 2


characteristic: INSDC center name

text: live

text: Generic

text: Mus musculus

text: Liver

text: Liver

text: p62f/f mice AlbCre positive - Specific deletion of p62 in hepatocytes 3


characteristic: INSDC first public

text: live

text: Generic

text: TSC1f/f Cre positive Specific deletion of TSC1 in hepatocytes

text: Mus musculus

text: Liver

text: Liver

text: TSC1f/f Cre positive-1 Specific deletion of TSC1 in hepatocytes


text: live

text: Generic

text: Mus musculus

text: Liver

text: Liver

text: TSC1f/f Cre positive-2 Specific deletion of TSC1 in hepatocytes


text: live

text: Generic

text: Mus musculus

text: Liver

text: Liver

text: TSC1f/f Cre positive-3 Specific deletion of TSC1 in hepatocytes


text: live

text: Generic

text: Mus musculus

text: Liver

text: Liver

text: TSC1f/f / p62f/f mice AlbCre positive - Specific deletion of TSC1 and p62 in hepatocytes 1


text: live

text: Generic

text: Mus musculus

text: Liver

text: Liver

text: TSC1f/f / p62f/f mice AlbCre positive - Specific deletion of TSC1 and p62 in hepatocytes 2


text: live

text: Generic

text: Mus musculus

text: Liver

text: Liver

text: TSC1f/f / p62f/f mice AlbCre positive - Specific deletion of TSC1 and p62 in hepatocytes 3


text: beef

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

text: live

text: Pathogen.env

text: environmental/food/other

text: ASPHL

characteristic: collected by

characteristic: collection date

text: USA:AK

characteristic: geo loc name

text: beef trim

characteristic: isolation source

text: beef trim:FOODON_03311508

characteristic: ontological term

text: Escherichia coli

text: environmental/food/other

characteristic: package

characteristic: pfge primary enzyme pattern

text: food

characteristic: source type

text: Bos

characteristic: specific host

characteristic: strain

text: Pathogen: environmental/food/other sample from Escherichia coli


text: clinical/research| human

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

text: clinical/host-associated

text: Minnesota Department of Health

text: USA:MN

text: Homo sapiens

characteristic: host

text: feces

text: Salmonella enterica

text: human

text: Pathogen: clinical or host-associated sample from Salmonella enterica

characteristic: title


characteristic: External Id

text: Ion transport, Physiology, Radboud Institute for Molecular Life Sciences

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: SRA accession

characteristic: cell line

text: immortalized mouse DCT cells

characteristic: cell type

text: rabbit anti-Hnf1β (Santa Cruz, H-85, SC-22840)

characteristic: chip antibody

text: Mus musculus

characteristic: organism

characteristic: passages

characteristic: strain background


text: veterinary clinical/research, other animal

characteristic: IFSAC+ Category

text: CFSAN

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: Penn State E. coli Reference Center

characteristic: collected by

characteristic: collection date

text: USA:PA

characteristic: geo loc name

text: Odocoileus virginianus

text: spleen white-tailed deer

characteristic: isolation source

text: spleen:UBERON_0002106, white-tailed deer:FOODON_03411537

characteristic: ontological term

text: Escherichia coli

text: animal

characteristic: source type

characteristic: strain


characteristic: External Id

text: CFSAN

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: Pennsylvania State University | Escherichia coli Reference Center

text: USA:PA

text: Odocoileus virginianus

characteristic: host

text: small intestine white-tailed deer

text: small intestine:UBERON_0002108, white-tailed deer:FOODON_03411537

text: Escherichia coli

text: animal

characteristic: title


text: live

text: Pathogen.env

text: environmental/food/other

text: FDA

characteristic: fda lab id

text: USA:NJ

text: environmental

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

characteristic: project name

text: United States Food and Drug Administration|Office of Regulatory Affairs|Northeast Food and Feed Laboratory

characteristic: sequenced by

text: Pathogen: environmental/food/other sample from Listeria monocytogenes


text: vegetable row crops (leafy)

characteristic: IFSAC Category

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA

characteristic: collected by

characteristic: collection date

text: USA:OH

characteristic: geo loc name

text: lettuce

text: lettuce vegetable food product:FOODON_00001998

text: Listeria monocytogenes

text: environmental/food/other

characteristic: package

text: GenomeTrakr

text: food


characteristic: External Id

text: fish

characteristic: INSDC center name

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA

text: Viet Nam

text: round scad

characteristic: isolation source

text: round scad:FOODON_03412481

characteristic: ontological term

text: Salmonella enterica

text: environmental/food/other

text: GenomeTrakr

text: United States Food and Drug Administration|Office of Regulatory Affairs|Pacific Southwest Food and Feed Laboratory

text: food

characteristic: source type

characteristic: strain

text: Pathogen: environmental/food/other sample from Salmonella enterica


text: pork

characteristic: IFSAC+ Category

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

characteristic: Isolate name alias

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:PA

text: pork

text: pork meat food product:FOODON_00001038

text: Salmonella enterica

text: environmental/food/other

text: food

characteristic: title


tag: Namespace:DOE Joint Genome Institute

text: Environmental | Terrestrial | Soil | Sand | Desert

characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: 36.766667 N 115.95 W

characteristic: lat lon

text: soil metagenome

characteristic: organism

text: Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+


Mycoplasma pneumoniae C267

characteristic: External Id

text: Institute Of Microbiology Chinese Academy of Sciences

characteristic: INSDC center name

text: live

text: Pathogen.cl

text: Capital Institute of Pediatrics

characteristic: collected by

characteristic: collection date

text: China: Beijing

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: pneumonia

characteristic: host disease

text: sputum

characteristic: isolation source

text: Mycoplasmoides pneumoniae

text: Pathogen: clinical or host-associated sample from Mycoplasmoides pneumoniae


Gut of argasid tick

text: Instituto Butantan

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Invertebrate

text: Brazil: Araraquara, Sao Paulo

text: bats, birds, opossums and humans

text: Females

characteristic: isolate

text: Alectorobius mimon

text: female

characteristic: sex

text: gut

characteristic: tissue

text: Invertebrate sample from Alectorobius mimon


text: clinical/research, human

characteristic: IFSAC+ Category

text: Brigham & Women's Hospital

characteristic: INSDC last update

text: live

text: USA

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Xiaomin Zhao

text: Enterobacter

characteristic: genus

text: USA:Boston

text: Homo sapiens

characteristic: host age

text: male

characteristic: host sex

characteristic: host subject id

text: blood

text: blood

characteristic: ontological term

text: Enterobacter cloacae

text: human

characteristic: source type

characteristic: strain

text: Pathogen: clinical or host-associated sample from Enterobacter cloacae

characteristic: title

type: AMR curated data - CABBAGE

value: ertapenem

value: CLSI

value: disk diffusion

value: mm

value: KB panel

value: resistant

value: Enterobacter cloacae

value: ciprofloxacin

value: broth dilution

value: mg/L

value: Vitek

value: aztreonam

value: imipenem

value: ceftriaxone

value: meropenem

value: levofloxacin

value: piperacillin

value: tobramycin


characteristic: External Id

text: seeded vegetables (vine-grown)

characteristic: IFSAC Category

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: FDA

characteristic: collected by

characteristic: collection date

text: USA:MD

characteristic: geo loc name

text: cucumber

characteristic: isolation source

text: cucumber (whole, raw):FOODON_03301545

text: Salmonella enterica

characteristic: organism

text: environmental/food/other

characteristic: package

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: food


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Blood

characteristic: body site

text: HMB-MDS

text: Blood

characteristic: histological type

text: No

characteristic: is tumor

text: SNP/CNV Genotypes (NGS)

characteristic: molecular data type

text: Homo sapiens

text: male

characteristic: sex

text: Case-Control

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Non-tumor DNA sample from Blood of a human male participant in the dbGaP study Transdisciplinary Research Into Cancer of the Lung (TRICL) - Exome Plus Targeted Sequencing


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: DNA

text: Blood

text: HMB-MDS

text: Blood

text: No

text: SNP/CNV Genotypes (NGS)

text: Homo sapiens

characteristic: organism

text: male

text: Case-Control

text: Transdisciplinary Research Into Cancer of the Lung (TRICL) - Exome Plus Targeted Sequencing

characteristic: title


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Blood

characteristic: body site

text: HMB-MDS

text: Blood

characteristic: histological type

text: No

text: SNP/CNV Genotypes (NGS)

text: Homo sapiens

text: female

text: Case-Control

text: Non-tumor DNA sample from Blood of a human female participant in the dbGaP study Transdisciplinary Research Into Cancer of the Lung (TRICL) - Exome Plus Targeted Sequencing


text: dbGaP

text: live

text: Generic

text: DNA

text: Blood

text: DS-CA

text: Blood

text: No

characteristic: is tumor

text: SNP/CNV Genotypes (NGS)

characteristic: molecular data type

text: Homo sapiens

text: female

characteristic: sex

text: Case-Control

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: DNA

text: Blood

text: DS-CA

text: Blood

text: No

text: SNP/CNV Genotypes (NGS)

text: Homo sapiens

characteristic: organism

text: male

text: Case-Control

characteristic: title


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Blood

characteristic: body site

text: DS-CA-MDS

text: Blood

characteristic: histological type

text: No

text: SNP/CNV Genotypes (NGS)

text: Homo sapiens

text: male

text: Case-Control


text: dbGaP

text: live

text: Generic

text: DNA

text: Blood

text: DS-CA-MDS

text: Blood

text: No

characteristic: is tumor

text: SNP/CNV Genotypes (NGS)

characteristic: molecular data type

text: Homo sapiens

text: female

characteristic: sex

text: Case-Control

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: DNA

text: Saliva

text: DS-CA

text: Saliva

text: No

text: SNP/CNV Genotypes (NGS)

text: Homo sapiens

characteristic: organism

text: male

text: Case-Control

text: Non-tumor DNA sample from Saliva of a human male participant in the dbGaP study Transdisciplinary Research Into Cancer of the Lung (TRICL) - Exome Plus Targeted Sequencing

characteristic: title


text: seeds

characteristic: IFSAC Category

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: FDA

characteristic: collected by

characteristic: collection date

characteristic: fda lab id

text: Ethiopia

characteristic: geo loc name

text: sesame seed

characteristic: isolation source

text: sesame seed:FOODON_03310306

characteristic: ontological term

text: Salmonella enterica

text: environmental/food/other

characteristic: package

text: GenomeTrakr

characteristic: project name

text: United States Food and Drug Administration|Office of Regulatory Affairs|Southeast Food and Feed Laboratory

characteristic: sequenced by

text: food

characteristic: source type

characteristic: strain


characteristic: External Id

text: environmental

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: Thakur Molecular Epidemiology Lab

text: USA:NC

text: soil

text: Salmonella enterica

text: GenomeTrakr

text: environmental


text: environmental

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: Thakur Molecular Epidemiology Lab

characteristic: collected by

characteristic: collection date

text: USA:NC

text: soil

text: Salmonella enterica

characteristic: organism

text: GenomeTrakr

text: Typhimurium

characteristic: serovar

text: environmental

characteristic: title


text: multi-ingredient

characteristic: IFSAC Category

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA

characteristic: fda lab id

text: USA:NY

characteristic: geo loc name

text: food

characteristic: isolation source

characteristic: ontological term

text: Salmonella enterica

text: environmental/food/other

characteristic: package

text: GenomeTrakr

characteristic: project name

text: United States Food and Drug Administration|Office of Regulatory Affairs|Northeast Food and Feed Laboratory

characteristic: sequenced by

text: food

characteristic: source type


characteristic: External Id

text: multi-ingredient

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: FDA

text: India

text: food

text: Salmonella enterica

text: environmental/food/other

text: GenomeTrakr

text: food

characteristic: strain


text: multi-ingredient

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: FDA

characteristic: collected by

characteristic: collection date

text: Taiwan

text: food

text: Salmonella enterica

characteristic: organism

text: environmental/food/other

text: GenomeTrakr

text: food


text: multi-ingredient

characteristic: IFSAC Category

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA

characteristic: fda lab id

text: Turkey

characteristic: geo loc name

text: food

characteristic: isolation source

text: Salmonella enterica

text: environmental/food/other

text: GenomeTrakr

text: food

characteristic: title


text: Gastroenterology, Ospedale San Raffaele

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: neural stem cell

characteristic: cell type

text: wild type

characteristic: genotype

text: Mus musculus

text: E14.5 Forebrain

text: Wild Type Neural Stem Cells


characteristic: External Id

text: Gastroenterology, Ospedale San Raffaele

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: neural stem cell

text: Prdm16 null

text: Mus musculus

text: E14.5 Forebrain

text: Prdm16-null Neural Stem Cells


text: Gastroenterology, Ospedale San Raffaele

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: neural stem cell

text: Prdm16 overexpressing

text: Mus musculus

text: E14.5 Forebrain

text: Prdm16-overexpressing Neural Stem Cells


text: IGC, Salk Institute for Biological Studies

text: live

text: Generic

characteristic: background strain

text: mESC-derived EBs

characteristic: day of differentiation

text: WT

text: LG

characteristic: glucose concentration

text: Mus musculus

characteristic: organism

text: Embryoid Bodies (EBs)


text: live

text: Generic

text: ESCs

text: WT

text: HG

text: Mus musculus

text: mouse embryonic stem cells (mESCs)


text: live

text: Generic

text: mESC-derived EBs

text: WT

text: HG

text: Mus musculus

text: Embryoid Bodies (EBs)


text: live

text: Generic

text: mESC-derived EBs

text: AMPK DKO

text: LG

text: Mus musculus

text: Embryoid Bodies (EBs)


text: live

text: Generic

text: ESCs

text: AMPK DKO

text: HG

text: Mus musculus

text: mouse embryonic stem cells (mESCs)


text: live

text: Generic

text: mESC-derived EBs

text: AMPK DKO

text: HG

text: Mus musculus

text: Embryoid Bodies (EBs)


text: fish

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

text: environmental/food/other

text: HI

characteristic: collected by

characteristic: collection date

text: Viet Nam

characteristic: geo loc name

text: frozen whole clarias fish

characteristic: isolation source

text: Typhimurium

characteristic: serovar

text: food

characteristic: source type

characteristic: strain

text: enterica

characteristic: sub species

text: Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica serovar Typhimurium


characteristic: External Id

text: fish

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: HI

text: Philippines

text: frozen whole clarias fish

text: Potsdam

text: food

text: enterica

text: Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica serovar Potsdam

characteristic: title


text: fish

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: HI

text: Viet Nam

text: frozen clarias fish

characteristic: organism

text: Weltevreden

text: food

text: enterica

text: Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica serovar Weltevreden


text: fish

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

text: environmental/food/other

text: HI

characteristic: collected by

characteristic: collection date

text: China

characteristic: geo loc name

text: frozen golden pampano fish

text: Tennessee

text: food

text: enterica

text: Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica serovar Tennessee


text: Engineered | Bioreactor | Anaerobic | Digestate | Unclassified

characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: 52.0385 N 8.4956 E

characteristic: lat lon

text: biogas fermenter metagenome

text: Biogas fermentation microbial communities from Germany - Plant 1 DNA2


characteristic: External Id

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: 52.0385 N 8.4956 E

text: biogas fermenter metagenome

text: Biogas fermentation microbial communities from Germany - Plant 2 DNA1


text: DOE Joint Genome Institute

characteristic: INSDC center name

text: live

text: Metagenome or environmental

text: 52.0385 N 8.4956 E

text: biogas fermenter metagenome

text: Biogas fermentation microbial communities from Germany - Plant 2 DNA2


text: DOE Joint Genome Institute

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: 52.0385 N 8.4956 E

text: biogas fermenter metagenome

text: Biogas fermentation microbial communities from Germany - Plant 3 DNA1


text: DOE Joint Genome Institute

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: 52.0385 N 8.4956 E

text: biogas fermenter metagenome

text: Biogas fermentation microbial communities from Germany - Plant 3 DNA2


text: DOE Joint Genome Institute

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: 52.0385 N 8.4956 E

text: biogas fermenter metagenome

text: Biogas fermentation microbial communities from Germany - Plant 4 DNA1


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: 52.0385 N 8.4956 E

text: biogas fermenter metagenome

text: Biogas fermentation microbial communities from Germany - Plant 1 DNA1


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: 52.0385 N 8.4956 E

text: biogas fermenter metagenome

text: Biogas fermentation microbial communities from Germany - Plant 4 DNA2

characteristic: title


text: seeded vegetables (solanaceous)

characteristic: IFSAC Category

text: FDA Center for Food Safety and Applied Nutrition

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: USA

text: tomato

characteristic: isolation source

text: tomato (whole, raw):FOODON_03309927

characteristic: ontological term

text: Salmonella enterica

text: environmental/food/other

characteristic: package

text: Newport

characteristic: serovar

text: food

characteristic: source type

characteristic: strain

text: Pathogen: environmental/food/other sample from Salmonella enterica


text: seeded vegetables (solanaceous)

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

characteristic: collected by

characteristic: collection date

text: USA

characteristic: geo loc name

text: jalapeno pepper

text: jalapeno pepper food product:FOODON_00001976

text: Salmonella enterica

characteristic: organism

text: environmental/food/other

text: Saintpaul

text: food


characteristic: External Id

text: sprouts

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: USA:IL

text: sprout

text: Salmonella enterica

text: environmental/food/other

text: muenchen

text: food


text: sprouts

characteristic: IFSAC Category

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: ATCC:ATCC 51958

characteristic: culture collection

text: sprout

text: Salmonella enterica

text: environmental/food/other

text: Mbandaka

text: food

text: ATCC ATCC 51958

characteristic: title


text: root/underground, sprouts

text: live

text: Pathogen.cl

text: clinical/host-associated

text: Japan

text: Homo sapiens

characteristic: host

text: radish sprout

characteristic: isolation source

text: radish (whole, raw):FOODON_03304656, sprout:FOODON_03420183

characteristic: ontological term

text: Escherichia coli

text: environmental/food/other

characteristic: package

text: Iia

characteristic: pfge primary enzyme pattern

text: food

text: Pathogen: clinical or host-associated sample from Escherichia coli


text: beef

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

characteristic: collected by

text: ATCC:ATCC 43895

text: raw hamburger meat

text: meat (raw):FOODON_03306429, ground beef food product:FOODON_00001282

text: Escherichia coli

text: environmental/food/other

text: food

characteristic: source type

text: ATCC ATCC 43895

characteristic: strain

text: Pathogen: environmental/food/other sample from Escherichia coli


characteristic: External Id

text: vegetable row crops (leafy)

characteristic: INSDC center name

text: live

text: Pathogen.cl

text: clinical/host-associated

characteristic: collection date

text: USA:IL

characteristic: geo loc name

text: Homo sapiens

text: CFSAN046272,ILDH 1848

text: spinach

text: spinach (whole, raw):FOODON_03301716

text: Escherichia coli

characteristic: organism

text: environmental/food/other

text: food


text: clinical/research, human

characteristic: IFSAC+ Category

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.cl

text: clinical/host-associated

text: NZRM:NZRM 4237

characteristic: culture collection

text: Homo sapiens

text: Listeria monocytogenes

text: human

text: NZRM NZRM 4237

text: Pathogen: clinical or host-associated sample from Listeria monocytogenes


text: crustaceans

characteristic: IFSAC Category

text: live

text: Pathogen.env

text: environmental/food/other

text: USA:AL

text: crawfish

characteristic: isolation source

text: crawfish or crayfish:FOODON_03412686

characteristic: ontological term

text: Listeria monocytogenes

text: environmental/food/other

characteristic: package

text: food

text: Pathogen: environmental/food/other sample from Listeria monocytogenes

characteristic: title


text: clinical/research, human

text: live

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

text: clinical/host-associated

characteristic: collected by

text: USA:MA

text: Homo sapiens

characteristic: host

text: Listeria monocytogenes

text: human

characteristic: source type


characteristic: External Id

text: fish

characteristic: INSDC center name

text: live

text: Pathogen.env

text: environmental/food/other

text: USA:CA

characteristic: geo loc name

text: CFSAN046277, 328898_1

text: fresh albacore tuna (Tombo Ahi)

text: albacore:FOODON_03411506, food (fresh):FOODON_00002457, yellowfin tuna:FOODON_03411074

text: Listeria monocytogenes

text: environmental/food/other

text: food

characteristic: strain


text: environmental, fish

characteristic: IFSAC+ Category

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

characteristic: collection date

text: USA:CA

text: CFSAN046278, 328896_1

text: environmental swab processing albacore tuna for restaturant sushi order

text: albacore:FOODON_03411506, environmental (swab or sampling):GENEPIO_0001732, order:NCBITAXON_ORDER, sushi:FOODON_00003243

text: Listeria monocytogenes

characteristic: organism

text: environmental


text: clinical/research, human

text: live

characteristic: INSDC status

text: Pathogen.cl

text: clinical/host-associated

text: Homo sapiens

text: cerebrospinal fluid

characteristic: isolation source

text: cerebrospinal fluid:UBERON_0001359

characteristic: ontological term

text: Listeria monocytogenes

text: human


text: clinical/research, human

text: live

text: Pathogen.cl

characteristic: NCBI submission model

text: clinical/host-associated

text: Homo sapiens

text: blood

text: Listeria monocytogenes

text: human

characteristic: title


text: DOE Joint Genome Institute

characteristic: INSDC secondary accession

text: live

text: MIGS.ba

characteristic: NCBI submission package

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Bacillus wiedmannii

text: Bacillus cereus KPR-7A


characteristic: External Id

text: DOE Joint Genome Institute

characteristic: INSDC center name

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Bacillus mycoides

text: Bacillus sp. OK634


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Bacillus toyonensis

characteristic: strain

text: Bacillus sp. YR331


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Xaviernesmea oryzae

text: CGMCC 1.7048

text: Rhizobium oryzae CGMCC 1.7048

text: type strain of Rhizobium oryzae

characteristic: type material


text: DOE Joint Genome Institute

characteristic: INSDC first public

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Bacillus nitratireducens

text: Bacillus sp. 112MF


text: seeded vegetables (solanaceous)

characteristic: IFSAC Category

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: NMSU

characteristic: collected by

text: USA:NM

characteristic: geo loc name

text: frozen chili pepper

text: frozen:PATO_0001985, chili pepper:FOODON_03315873

text: Listeria monocytogenes

text: environmental/food/other

characteristic: package

text: food

characteristic: source type


text: DOE Joint Genome Institute

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

text: Keywords: GSC:MIxS;MIGS:6.0

text: Humidesulfovibrio mexicanus

characteristic: organism

text: DSM 13116

text: Desulfovibrio mexicanus DSM 13116

text: type strain of Desulfovibrio mexicanus


text: DOE Joint Genome Institute

characteristic: INSDC secondary accession

text: live

text: MIGS.ba

characteristic: NCBI submission package

text: Keywords: GSC:MIxS;MIGS:6.0

text: Amycolatopsis keratiniphila

text: FH 1893

text: Amycolatopsis keratiniphila subsp. nogabecina DSM 44586

characteristic: title


characteristic: External Id

text: DOE Joint Genome Institute

text: live

text: MIGS.ba

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Pseudomonas orientalis

text: LMG 23660

text: Pseudomonas orientalis LMG 23660

text: type strain of Pseudomonas orientalis


text: Environmental | Terrestrial | Soil | Unclassified | Unclassified

characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

characteristic: INSDC center name

text: live

text: Metagenome or environmental

text: 35.94106884 N 84.4 W

characteristic: lat lon

text: soil metagenome

text: Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+


text: UNPSJB-CONICET

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Metagenome or environmental

characteristic: collection date

text: Bucket collected (~3L) surface water. The picoplankton fraction of the sample was concentrated by negative-pressure filtration through filters of decresing pore size (20 - 5 um) and immobilized onto a 0.22 um membrane, from which picoplankton DNA was recovered. 16S gene sequences were PCR amplified and submitted to barcoded pyrosequencing (454 Titanium and reagents).

text: Argentina: Trelew, lagoon 3 inlet

text: shallow lake

characteristic: isolation source

text: 43.24 S 65.24 W

text: freshwater metagenome

text: Metagenome or environmental sample from freshwater metagenome


RC.BT

text: UNPSJB-CONICET

text: live

text: Metagenome or environmental

text: Argentina: Rio Chubut, Boca-Toma

characteristic: geo loc name

text: river

text: 43.45 S 65.92 W

text: freshwater metagenome


LC

text: UNPSJB-CONICET

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: Argentina: Trelew, Chiquichano lagoon

text: shallow lake

text: 43.24 S 65.29 W

text: freshwater metagenome


text: University of Texas at Austin

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

text: 8-12 cm

characteristic: depth

text: Sulfate-rich zone estuary sediments

text: TRUE

characteristic: environmental sample

text: USA: White Oak River Estuary North Carolina

characteristic: isolate

text: Sulfate-rich zone estuary sediments 8-12 cm

text: 34.7414 N 77.1234 W

text: sediment metagenome

characteristic: metagenome source

text: TRUE

characteristic: metagenomic

text: This biosample is a metagenomic assembly obtained from the sediment metagenome BioSample: SAMN03451117

characteristic: note

text: Candidatus Proteinoplasmatales archaeon SG8-5

text: metagenomic assembly

characteristic: sample type

text: unique partial genomes


Pseudomonas stuterzi ODKF13

characteristic: External Id

text: University of Houston

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: Broad spectrum xenobiotic degrader

characteristic: description

text: USA: Farm from Alvin, Texas

text: soil

text: Stutzerimonas stutzeri

characteristic: organism

text: cell culture

characteristic: strain

text: ESRM sample Pseudomonas stutzeri ODKF13

characteristic: title


text: veterinary clinical/research| pig

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: HI

characteristic: collected by

characteristic: collection date

text: USA:HI

text: swine intestinal swab

characteristic: isolation source

text: Corvallis

characteristic: serovar

text: animal

characteristic: source type

text: enterica

characteristic: sub species

text: Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica serovar Corvallis


characteristic: External Id

text: veterinary clinical/research| pig

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: HI

text: USA:HI

characteristic: geo loc name

text: swine intestinal swab

text: Salmonella enterica subsp. enterica serovar Corvallis

text: Corvallis

text: animal

text: enterica


text: veterinary clinical/research| pig

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

text: environmental/food/other

text: HI

text: USA:HI

text: swine intestinal swab

characteristic: organism

text: Typhimurium

text: animal

characteristic: strain

text: enterica

text: Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica serovar Typhimurium

characteristic: title


text: veterinary clinical/research| pig

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

text: environmental/food/other

text: HI

text: USA:HI

text: swine intestinal swab

text: Salmonella enterica subsp. enterica serovar Typhimurium

text: Typhimurium

text: animal

text: enterica


text: veterinary clinical/research| other animal

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: HI

characteristic: collected by

characteristic: collection date

text: USA:HI

text: avian smail intestine swab

characteristic: isolation source

text: avian animal:FOODON_00002616, intestine:UBERON_0000160, swab:NCIT_C17627

characteristic: ontological term

text: Typhimurium

text: animal

text: enterica


Trichosporon inkin C-2155

characteristic: External Id

text: UNIVERSIDAD AUTONOMA DE NUEVO LEON

text: live

characteristic: INSDC status

text: Pathogen.cl

text: Centro Regional de Control de Enfermedades Infecciosas

text: Mexico: Monterrey

text: Homo sapiens

characteristic: host

text: White piedra

characteristic: host disease

text: hair

text: 25.4 N 100.30 W

characteristic: lat lon

text: Trichosporon inkin

text: Pathogen: clinical or host-associated sample from Trichosporon inkin


text: Seoul National University Graduate School of Public Health

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Aspergillus fumigatus

characteristic: organism

text: mRNA sequncing of SusCtrl_1hr1

characteristic: sample type

text: Microbe sample from Aspergillus fumigatus


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of SusCtrl_1hr2

characteristic: strain

characteristic: title


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: Aspergillus fumigatus

text: mRNA sequncing of SusCtrl_1hr3


text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of SusCtrl_4hr1


text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of SusCtrl_4hr2


text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of SusCtrl_4hr3


text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of SusItz4_1hr1?


text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of SusItz4_1hr2?


text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of SusItz4_1hr3?


text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of SusItz4_4hr1


text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of SusItz4_4hr2


text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of SusItz4_4hr3


text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of SusTbz8_1hr1


text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of SusTbz8_1hr2


text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of SusTbz8_1hr3


text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of SusTbz8_4hr1


text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of SusTbz8_4hr2


text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of SusTbz8_4hr3


text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of SusTbz1_1hr1


text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of SusTbz1_1hr2


text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of SusTbz1_1hr3


text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of SusTbz1_4hr1


text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of SusTbz1_4hr2


text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of SusTbz1_4hr3


text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of ResCtrl_1hr1


text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of ResCtrl_1hr2


text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of ResCtrl_1hr3


text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of ResCtrl_4hr1


text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of ResCtrl_4hr2


text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of ResCtrl_4hr3


text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of ResItz4_1hr1


text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of ResItz4_1hr2


text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of ResItz4_1hr3


text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of ResItz4_4hr1


text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of ResItz4_4hr2


text: live

text: Microbe, viral or environmental

text: Aspergillus fumigatus

text: mRNA sequncing of ResItz4_4hr3


text: fish

characteristic: IFSAC Category

text: live

text: Pathogen.env

text: environmental/food/other

text: ASPHL

characteristic: collected by

characteristic: collection date

text: USA:AK

characteristic: geo loc name

text: processed fish

characteristic: isolation source

text: fish product processed:FOODON_03315491

characteristic: ontological term

text: Listeria monocytogenes

text: environmental/food/other

characteristic: package

characteristic: pfge primary enzyme pattern

text: food

characteristic: source type

text: Pathogen: environmental/food/other sample from Listeria monocytogenes


characteristic: External Id

text: Nathan Salomonis, Biomedical Informatics, Cincinnati Children's Hospital

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: acute myeloid leukemia

characteristic: cell type

text: Mus musculus

characteristic: organism

text: primary AML

text: cKit+ splenocytes

characteristic: tissue

text: 8303 Flt3ITD/ITD,Dnmt3afl/- MxCre AML


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: acute myeloid leukemia

text: Mus musculus

text: primary AML

text: cKit+ splenocytes

text: 9301 Flt3ITD/ITD,Dnmt3afl/- MxCre AML

characteristic: title


text: live

text: Generic

text: acute myeloid leukemia

text: Mus musculus

text: primary AML

text: cKit+ splenocytes

text: 9797 Flt3ITD/ITD,Dnmt3afl/- MxCre AML


text: Michael Brent, Computer Science, Washington University in Saint Louis

text: live

text: Generic

text: 37°C DMEM + 5% CO2 for 90mins

characteristic: condition

text: capsule-inducing

characteristic: condition description

characteristic: genotype

characteristic: induction date

characteristic: library date

text: Cryptococcus neoformans

text: cultured cells

characteristic: strain


characteristic: External Id

text: Baylor College of Medicine

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: 33 weeks

characteristic: age

text: BALB/c

characteristic: host strain background

text: wild type

characteristic: host strain genotype/variation

text: 17β-estradiol (100ug) for 8 hrs

characteristic: injected with

text: Mus musculus

text: p53 null mammary glands treated with E8h

text: Mammary gland

text: Mammary epithelium from p53 null mice

characteristic: transplanted with


text: Baylor College of Medicine

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

text: 33 weeks

text: ERα (Santa Cruz, sc-542)

characteristic: chip antibody

text: BALB/c

text: wild type

text: 17β-estradiol (100ug) for 8 hrs

text: Mus musculus

characteristic: organism

text: p53 null mammary glands Sham treated with E8h

text: Mammary gland

characteristic: tissue

text: Mammary epithelium from p53 null mice

text: sham pellet subcutaneously for 13 weeks

characteristic: treated with