characteristic: External Id

text: Baylor College of Medicine

text: live

text: Generic

characteristic: SRA accession

text: 33 weeks

text: ERα (Santa Cruz, sc-542)

text: BALB/c

text: wild type

text: 17β-estradiol (100ug) for 8 hrs

text: Mus musculus

text: p53 null mammary glands Tam treated with E8h

text: Mammary gland

characteristic: title

text: Mammary epithelium from p53 null mice

text: tamoxifen (5mg) pellet subcutaneously for 13 weeks


status: PUBLIC

text: Michael Brent, Computer Science, Washington University in Saint Louis

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 37°C DMEM + 5% CO2 for 90mins

tag: attribute

characteristic: condition

text: capsule-inducing

characteristic: condition description

text: wildtype

characteristic: genotype

characteristic: induction date

characteristic: library date

text: Cryptococcus neoformans

characteristic: organism

text: cultured cells

characteristic: strain

text: 00000-37C.CO2.90m-1-11.06.15-11.16.15-598


characteristic: External Id

text: live

text: Generic

text: 37°C DMEM + 5% CO2 for 90mins

text: capsule-inducing

text: wildtype

text: Cryptococcus neoformans

text: cultured cells

text: 00000-37C.CO2.90m-2-11.06.15-11.16.15-599


text: live

text: Generic

characteristic: SRA accession

text: 37°C DMEM + 5% CO2 for 90mins

text: capsule-inducing

text: wildtype

text: Cryptococcus neoformans

text: cultured cells

text: 00000-37C.CO2.90m-3-11.06.15-11.16.15-600


text: live

text: Generic

text: 37°C DMEM + 5% CO2 for 90mins

text: capsule-inducing

text: GAT201(CNAG_01551) Overexpression

text: Cryptococcus neoformans

text: cultured cells

text: 01551_over-37C.CO2.90m-1-11.06.15-11.16.15-601

characteristic: title


characteristic: INSDC center name

text: live

text: Generic

text: 37°C DMEM + 5% CO2 for 90mins

text: capsule-inducing

text: GAT201(CNAG_01551) Overexpression

text: Cryptococcus neoformans

text: cultured cells

text: 01551_over-37C.CO2.90m-2-11.06.15-11.16.15-602


characteristic: INSDC first public

text: live

text: Generic

text: 37°C DMEM + 5% CO2 for 90mins

text: capsule-inducing

text: GAT201(CNAG_01551) Overexpression

text: Cryptococcus neoformans

text: cultured cells

text: 01551_over-37C.CO2.90m-3-11.06.15-11.16.15-603


characteristic: INSDC last update

text: live

text: Generic

text: 37°C DMEM + 5% CO2 for 90mins

text: capsule-inducing

text: Cryptococcus neoformans

text: cultured cells

text: 00156-37C.CO2.90m-1-11.06.15-11.16.15-604


characteristic: INSDC secondary accession

text: live

text: Generic

text: 37°C DMEM + 5% CO2 for 90mins

text: capsule-inducing

text: Cryptococcus neoformans

text: cultured cells

text: 00156-37C.CO2.90m-2-11.06.15-11.16.15-605


text: live

characteristic: INSDC status

text: Generic

text: 37°C DMEM + 5% CO2 for 90mins

text: capsule-inducing

text: Cryptococcus neoformans

text: cultured cells

text: 00156-37C.CO2.90m-3-11.06.15-11.16.15-606


text: live

text: Generic

characteristic: NCBI submission model

text: 37°C DMEM + 5% CO2 for 90mins

text: capsule-inducing

text: Cryptococcus neoformans

text: cultured cells

text: 05420-37C.CO2.90m-1-11.06.15-11.16.15-607


text: live

text: Generic

characteristic: NCBI submission package

text: 37°C DMEM + 5% CO2 for 90mins

text: capsule-inducing

text: Cryptococcus neoformans

text: cultured cells

text: 05420-37C.CO2.90m-2-11.06.15-11.16.15-608


text: live

text: Generic

text: 37°C DMEM + 5% CO2 for 90mins

characteristic: condition

text: capsule-inducing

text: Cryptococcus neoformans

text: cultured cells

text: 05420-37C.CO2.90m-3-11.06.15-11.16.15-609


text: live

text: Generic

text: 37°C DMEM + 5% CO2 for 90mins

text: capsule-inducing

characteristic: condition description

text: P-CNAG_02044:GAT201(CNAG_01551) usv101(CNAG_05420)delta

text: Cryptococcus neoformans

text: cultured cells


text: live

text: Generic

text: 37°C DMEM + 5% CO2 for 90mins

text: capsule-inducing

text: P-CNAG_00456:GAT201(CNAG_01551) usv101(CNAG_05420)delta

characteristic: genotype

text: Cryptococcus neoformans

text: cultured cells


text: live

text: Generic

text: 37°C DMEM + 5% CO2 for 90mins

text: capsule-inducing

characteristic: induction date

text: Cryptococcus neoformans

text: cultured cells


text: University of Washington

text: live

text: Model organism or animal

text: Adult

characteristic: age

text: USA: Orange Co., Santa Ana Mountains, ridge SW Coal Canyon

characteristic: geo loc name

text: Phrynosoma blainvillii

text: personal:Robert Fisher:PHCO-CHI-15

characteristic: specimen voucher

text: Liver

characteristic: tissue

text: Model organism or animal sample from Phrynosoma blainvillii


characteristic: External Id

text: University of Washington

text: live

text: Model organism or animal

characteristic: SRA accession

text: Adult

text: USA: Orange Co., NW Gilman Peak

text: Phrynosoma blainvillii

characteristic: organism

text: personal:Robert Fisher:PHCO-CHI-24

text: Liver


text: University of Washington

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Model organism or animal

text: Adult

text: USA: San Diego Co., Little Cedar Ridge

text: Phrynosoma blainvillii

text: personal:Robert Fisher:PHCO-LC-15

text: Liver

characteristic: title


text: University of Washington

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Model organism or animal

text: Adult

text: USA: Ventura Co., SE La Jolla Peak

text: Phrynosoma blainvillii

text: personal:Robert Fisher:PHCO-LJV-23

text: Liver


text: University of Washington

text: live

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Adult

text: USA: Ventura Co., E La Jolla Valley

text: Phrynosoma blainvillii

text: personal:Robert Fisher:PHCO-LJV-28

text: Liver


text: University of Washington

text: live

text: Model organism or animal

text: Adult

text: Mexico: 47 km E Hwy 1 on road to Bahia de Los Angeles

text: Phrynosoma cerroense

text: Liver

text: Model organism or animal sample from Phrynosoma cerroense


text: University of Washington

text: live

text: Model organism or animal

text: Adult

text: Mexico: 12.9 mi S Catavina

text: Phrynosoma cerroense

text: Liver


text: University of Washington

text: live

text: Model organism or animal

text: Adult

text: Mexico: Vizcaino

text: Phrynosoma cerroense

text: Liver


text: University of Washington

text: live

text: Model organism or animal

text: Adult

text: USA: Kern Co., Magnolia and 7th Streets jct. on Standard Rd.

text: Phrynosoma blainvillii

text: Liver


text: University of Washington

text: live

text: Model organism or animal

text: Adult

text: USA: Monterey Co., China Camp

text: Phrynosoma blainvillii

text: Liver


text: University of Washington

text: live

text: Model organism or animal

text: Adult

text: USA: Riverside Co., Lake Perris State Rec. Area

text: Phrynosoma blainvillii

text: personal:Robert Fisher:PHCO-PERRIS-00

text: Liver


text: University of Washington

text: live

text: Model organism or animal

text: Adult

text: USA: San Benito Co., Pinnacles N.M.

text: Phrynosoma blainvillii

text: personal:Robert Fisher:PHCO-RNF-2849

text: Liver


text: University of Washington

text: live

text: Model organism or animal

text: Adult

text: Mexico: 1.8 mi S El Triunfo

text: Phrynosoma coronatum

text: Liver

text: Model organism or animal sample from Phrynosoma coronatum


text: University of Washington

text: live

text: Model organism or animal

text: Adult

text: USA: Los Angeles Co., Piru Creek

text: Phrynosoma blainvillii

text: Liver


text: University of Washington

text: live

text: Model organism or animal

text: Adult

text: USA: Los Angeles Co., Mescal Creek, N of Angeles N.F.

text: Phrynosoma blainvillii

text: personal:Robert Fisher:PHCO-RY2

text: Liver


text: University of Washington

text: live

text: Model organism or animal

text: Adult

text: Mexico: Santa Rita

text: Phrynosoma coronatum

text: personal:Robert Fisher:PHCO-SantaRita

text: Liver


text: University of Washington

text: live

text: Model organism or animal

text: Adult

text: Mexico: 11 km S Santa Rita

text: Phrynosoma coronatum

text: personal:Robert Fisher:SDField:251

text: Liver


text: University of Washington

text: live

text: Model organism or animal

text: Adult

text: USA: San Diego Co., S Hauser Canyon

text: Phrynosoma blainvillii

text: personal:Brad Hollingsworth:SDField:335

text: Liver


text: University of Washington

text: live

text: Model organism or animal

text: Adult

text: Mexico: 2.5 mi NW San Evaristo Base Camp

text: Phrynosoma coronatum

text: personal:Brad Hollingsworth:SDField:530

text: Liver


text: University of Washington

text: live

text: Model organism or animal

text: Adult

text: Mexico: Piedras Paradas

text: Phrynosoma coronatum

text: Liver


text: University of Washington

text: live

text: Model organism or animal

text: Adult

text: USA: San Diego Co., Boulder Creek

text: Phrynosoma blainvillii

text: Liver


text: University of Washington

text: live

text: Model organism or animal

text: Adult

text: USA: San Bernardino Co., Silverwood Lake S.R.A.

text: Phrynosoma blainvillii

text: personal:Robert Fisher:PHCO-SILVER-02A

text: Liver


text: University of Washington

text: live

text: Model organism or animal

text: Adult

text: Phrynosoma blainvillii

text: personal:Robert Fisher:PHCO-SILVER-02B

text: Liver


text: University of Washington

text: live

text: Model organism or animal

text: Adult

text: Phrynosoma blainvillii

text: personal:Robert Fisher:PHCO-SILVER-21

text: Liver


text: University of Washington

text: live

text: Model organism or animal

text: Adult

text: USA: Ventura Co., NE Big Sycamore Canyon

text: Phrynosoma blainvillii

text: personal:Robert Fisher:PHCO-SYC-33

text: Liver


text: University of Washington

text: live

text: Model organism or animal

text: Adult

text: USA: Ventura Co., Ridge btwn. Wood and Big Sycamore Canyons

text: Phrynosoma blainvillii

text: personal:Robert Fisher:PHCO-SYC-37

text: Liver


text: University of Washington

text: live

text: Model organism or animal

text: Adult

text: USA: San Diego Co., Santa Ysabel Ecological Reserve

text: Phrynosoma blainvillii

text: personal:Robert Fisher:PHCO-SYR-23

text: Liver


text: University of Washington

text: live

text: Model organism or animal

text: Adult

text: USA: San Diego Co., Torrey Pines

text: Phrynosoma blainvillii

text: personal:Robert Fisher:PHCO-TP-14

text: Liver


text: University of Washington

text: live

text: Model organism or animal

text: Adult

text: USA: San Diego Co., Torrey Pines

text: Phrynosoma blainvillii

text: personal:Robert Fisher:PHCO-TP-141

text: Liver


text: University of Washington

text: live

text: Model organism or animal

text: Adult

text: Mexico: 1 km N Santa Rita

text: Phrynosoma coronatum

text: Liver


text: University of Washington

text: live

text: Model organism or animal

text: Adult

text: Mexico: 5 km E La Paz

text: Phrynosoma coronatum

text: Liver


text: University of Washington

text: live

text: Model organism or animal

text: Adult

text: Mexico: Valle las Palmas, Microondas Cerro Bola

text: Phrynosoma blainvillii

text: Liver


text: University of Washington

text: live

text: Model organism or animal

text: Adult

text: USA: San Diego Co., Wild Animal Park

text: Phrynosoma blainvillii

text: personal:Robert Fisher:PHCO-WAP-21

text: Liver


text: University of Washington

text: live

text: Model organism or animal

text: Adult

text: USA: Orange Co., NE Weir Canyon

text: Phrynosoma blainvillii

text: personal:Robert Fisher:PHCO-WEI-502

text: Liver


text: University of Washington

text: live

text: Model organism or animal

text: Adult

text: Mexico: Cedros Island, Baja California, MX

text: Phrynosoma cerroense

text: personal:Wendy Hodges:PHCO-WLHMX-1017

text: Liver


name: Microbial communities from bioreactor (seeded with sewage sludge) at LBNL, California, USA - Biofuel metagenome 1

text: Engineered | Bioreactor | Anaerobic | Unclassified | Unclassified

characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: collection date

text: USA: Berkeley, California

text: Bioreactor at Lawrence Berkeley National Laboratory, USA, seeded with sewage sludge

characteristic: isolation source

text: 37.8754404 N 122.2477251 W

characteristic: lat lon

text: bioreactor metagenome


name: Microbial communities from bioreactor (seeded with sewage sludge) at LBNL, California, USA - Biofuel metagenome 2

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Berkeley, California

characteristic: geo loc name

text: 37.8754404 N 122.2477251 W

text: bioreactor metagenome


name: Microbial communities from bioreactor (seeded with sewage sludge) at LBNL, California, USA - Biofuel metagenome 3

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Berkeley, California, bioreactor at Lawrence Berkeley National Laboratory

text: bioreactor seeded with sewage sludge

text: 37.8754404 N 122.2477251 W

text: bioreactor metagenome


text: fish

characteristic: IFSAC Category

text: FDA Center for Food Safety and Applied Nutrition

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA-GCSL

characteristic: collected by

text: USA:AL

text: mahi mahi fish

text: dolphinfish (mahi-mahi)

characteristic: nat-host

characteristic: ontological term

text: Morganella psychrotolerans

text: environmental/food/other

characteristic: package

text: food

characteristic: source type

characteristic: strain

text: Pathogen: environmental/food/other sample from Morganella psychrotolerans


characteristic: External Id

text: environmental-water

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FDA-GCSL

characteristic: culture collection

text: Japan

text: sea water

text: sea water:ENVO_00002149

text: Photobacterium aquimaris

characteristic: organism

text: environmental

text: DSM 23343

text: Pathogen: environmental/food/other sample from Photobacterium aquimaris

characteristic: title

text: type strain of Photobacterium aquimaris

characteristic: type material


text: fish

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: FDA-GCSL

characteristic: collection date

text: South Africa

characteristic: geo loc name

text: Merluccius capensis

characteristic: host

text: skin of merluccius capensi

characteristic: isolation source

text: zone of skin:UBERON_0000014, merluccius:NCBITAXON_8062

text: Photobacterium kishitanii

text: animal

text: DSM 2167

text: Pathogen: environmental/food/other sample from Photobacterium kishitanii


characteristic: External Id

text: fish

characteristic: IFSAC Category

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA-GCSL

characteristic: collected by

text: USA:AK

text: king salmon

text: skin king salmon

text: king threadfin:FOODON_03413457, zone of skin:UBERON_0000014

characteristic: ontological term

text: Photobacterium phosphoreum

text: environmental/food/other

characteristic: package

text: food

characteristic: source type

characteristic: strain

text: Pathogen: environmental/food/other sample from Photobacterium phosphoreum


text: fish

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FDA-GCSL

text: USA:MA

text: milkfish

text: skin milkfish

text: zone of skin:UBERON_0000014, milkfish:FOODON_03411909

text: Photobacterium phosphoreum

characteristic: organism

text: environmental/food/other

text: food

characteristic: title


text: fish

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: FDA-GCSL

characteristic: collection date

text: USA:AK

text: cod

text: skin cod

text: zone of skin:UBERON_0000014, cod:FOODON_03411423

text: Photobacterium phosphoreum

text: environmental/food/other

text: food


Hec

characteristic: External Id

text: University of Exeter

text: live

text: Microbe, viral or environmental

text: United Kingdom: Weymouth

characteristic: geo loc name

text: Cancer pagurus (edible crabs)

characteristic: host

text: Hepatospora eriocheir

text: Purified spores

characteristic: sample type

text: canceri

text: Hepatospora eriocheir canceri genome


text: Förstner Lab, Information Services, ZB MED - Information Centre for Life Sciences

text: live

text: Generic

text: Serratia marcescens

text: Monoclonal ANTI-FLAG^® M2 antibody produced in mouse conjugated to magnetic beads, Sigma, M8823, SL6M0090V

characteristic: rip antibody

text: total bacterial cell lysate

text: Db10 hfq-3FLAG

text: Sma FLAG


text: live

text: Generic

text: Serratia marcescens

text: total bacterial cell lysate

text: Db10 wild type

characteristic: strain

text: Sma WT


characteristic: INSDC center name

text: live

text: Generic

text: Serratia marcescens

text: total bacterial cell lysate

text: Db10 wild type

text: Sma Total -TEX


characteristic: INSDC first public

text: live

text: Generic

text: Serratia marcescens

text: total bacterial cell lysate

text: Db10 wild type

text: Sma Total +TEX

text: TEX

characteristic: treatment


text: veterinary clinical/research| cow

characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FLUFL

characteristic: collected by

text: USA:FL

text: Bos taurus

text: calf feces

characteristic: isolation source

text: hindlimb zeugopod:UBERON_0003823| feces:UBERON_0001988

characteristic: ontological term

text: Escherichia coli

text: animal

characteristic: source type

text: Pathogen: environmental/food/other sample from Escherichia coli


text: veterinary clinical/research| cow

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: USA

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: FLUFL

characteristic: collection date

text: Escherichia

characteristic: genus

text: USA:FL

text: Bos taurus

characteristic: isolate

text: feces calf

text: gastrointestinal system

text: feces:uberon_0001988| cattle calf:foodon_03411349

text: Escherichia coli

characteristic: organism

text: animal

characteristic: title

type: AMR curated data - CABBAGE

value: ceftiofur

value: CLSI

value: disk diffusion

value: resistant

value: Escherichia coli

value: ampicillin

value: colistin

value: susceptible

value: trimethoprim-sulfamethoxazole

value: cephalothin

value: sulfisoxazole

value: amoxicillin-clavulanic acid

value: chloramphenicol

value: streptomycin

value: gentamicin

value: intermediate

value: amikacin

value: nalidixic acid

value: cefotaxime

value: broth dilution

value: mg/L


characteristic: External Id

text: veterinary clinical/research| cow

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: USA

text: Pathogen.env

text: environmental/food/other

text: FLUFL

text: Escherichia

text: USA:FL

characteristic: geo loc name

text: Bos taurus

characteristic: host

text: feces calf

text: gastrointestinal system

text: Escherichia coli

text: animal

characteristic: strain

value: CLSI

value: disk diffusion

value: Escherichia coli

value: tetracycline

value: resistant

value: ceftiofur


text: veterinary clinical/research| cow

characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

text: USA

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FLUFL

characteristic: collected by

text: Escherichia

text: USA:FL

text: Bos taurus

text: feces calf

characteristic: isolation source

text: gastrointestinal system

characteristic: ontological term

text: Escherichia coli

text: animal

value: sulfisoxazole

value: ampicillin

value: colistin

value: susceptible

value: cephalothin


text: veterinary clinical/research| cow

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: USA

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: FLUFL

characteristic: collection date

text: Escherichia

text: USA:FL

text: Bos taurus

text: feces calf

text: gastrointestinal system

text: Escherichia coli

text: animal

characteristic: source type

value: trimethoprim-sulfamethoxazole

value: intermediate

value: amoxicillin-clavulanic acid

value: chloramphenicol

value: streptomycin

value: gentamicin


characteristic: External Id

text: veterinary clinical/research| cow

characteristic: INSDC center name

text: live

text: USA

text: Pathogen.env

text: environmental/food/other

text: FLUFL

text: Escherichia

characteristic: genus

text: USA:FL

text: Bos taurus

characteristic: isolate

text: feces calf

text: gastrointestinal system

text: Escherichia coli

characteristic: organism

text: animal

characteristic: title

value: CLSI

value: amikacin

value: nalidixic acid


text: veterinary clinical/research| cow

characteristic: IFSAC+ Category

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: USA

text: Pathogen.env

text: environmental/food/other

text: FLUFL

text: Escherichia

text: USA:FL

characteristic: geo loc name

text: Bos taurus

characteristic: host

text: feces calf

text: gastrointestinal system

text: Escherichia coli

text: animal

characteristic: strain

value: disk diffusion

value: Escherichia coli

value: cefotaxime

value: broth dilution

value: mg/L


text: veterinary clinical/research| cow

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FLUFL

characteristic: collected by

text: USA:FL

text: Bos taurus

text: calf feces

characteristic: isolation source

characteristic: ontological term

text: Escherichia coli O157:H7

text: animal

text: Pathogen: environmental/food/other sample from Escherichia coli O157:H7


characteristic: External Id

text: veterinary clinical/research| avian

characteristic: INSDC center name

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: FLUFL

characteristic: collection date

text: USA:FL

text: Avian

text: feces bird

text: feces:uberon_0001988| avian animal:foodon_00002616

text: Escherichia coli

text: animal

characteristic: source type


text: veterinary clinical/research| other animal

characteristic: IFSAC+ Category

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: FLUFL

text: USA:FL

text: Avian

text: bird feces

text: avian animal:FOODON_00002616, feces:UBERON_0001988

text: Escherichia coli

characteristic: organism

text: animal

characteristic: title


text: veterinary clinical/research| cow

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC last update

text: live

text: USA

text: Pathogen.env

text: environmental/food/other

text: FLUFL

text: Escherichia

characteristic: genus

text: USA:FL

characteristic: geo loc name

text: Bos taurus

characteristic: host

characteristic: isolate

text: feces calf

text: gastrointestinal system

text: Escherichia coli

text: animal

characteristic: strain

value: ampicillin

value: resistant

value: tetracycline

value: colistin

value: sulfisoxazole

value: ceftiofur


Chlamydia sp 2742-308

text: University of the Sunshine Coast

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: An uncultured Chlamydia species sequenced from a Madagascar tree boa (Sanzinia madagascariensis volontany).

characteristic: description

text: Switzerland: Perrefitte

text: Sanzinia madagascariensis volontany

text: choana

characteristic: isolation source

text: Candidatus Chlamydia sanziniae

text: Swab sample

characteristic: sample type

text: Uncultured Chlamydia sp. clone 2742-308


characteristic: External Id

text: Josep Carreras Leukaemia Research Institute

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: cell line

text: mouse myotube

characteristic: cell type

text: Mus musculus

text: C2C12 cell line


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: mouse myoblast

text: MacroH2A (Buschbeck et al., 2009)

characteristic: chip antibody

text: Mus musculus

characteristic: organism

text: C2C12 cell line

characteristic: title


text: live

characteristic: INSDC status

text: Generic

text: mouse myotube

text: MacroH2A (Buschbeck et al., 2009)

text: Mus musculus

text: C2C12 cell line


text: live

text: Generic

text: mouse myoblast

text: Mus musculus

text: C2C12 cell line


text: Tel Aviv University

text: live

text: Viral

characteristic: collection date

text: OPV2 serial passaging HeLa S3 39.5C

characteristic: description

text: USA

characteristic: geo loc name

characteristic: isolate

text: HeLa S3

text: HeLa S3

characteristic: lab host

text: Poliovirus 2

characteristic: temp

text: Viral sample from Poliovirus 2


characteristic: External Id

text: Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: Hinrich Schulenburg

characteristic: biomaterial provider

text: nematocidal Bacillus thuringiensis isolate

text: Caenorhabditis elegans

characteristic: host

text: Bacillus wiedmannii

text: whole organism

characteristic: sample type

characteristic: strain

text: Microbe sample from Bacillus wiedmannii


text: chicken

characteristic: IFSAC Category

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: Isolate name alias

text: Pathogen.env

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:IN

text: ground chicken

characteristic: isolation source

text: chicken (ground or minced):FOODON_03311826

characteristic: ontological term

text: Salmonella enterica

text: environmental/food/other

characteristic: package

text: food

characteristic: source type

text: Pathogen: environmental/food/other sample from Salmonella enterica


characteristic: External Id

text: chicken

characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

characteristic: collection date

text: USA:IN

characteristic: geo loc name

text: ground chicken

text: Salmonella enterica

characteristic: organism

text: environmental/food/other

text: food

characteristic: title


text: Moscat and Diaz-Meco, Pathology and Laboratory Medicine, WEILL CORNELL MEDICINE

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission model

text: Dissected liver sections were removed, flash frozen on dry ice, and RNA was harvested using Trizol RNA extraction.

characteristic: extract protocol

text: DEN injection and High Fat Diet (HFD)

characteristic: growth protocol

text: Mus musculus

text: tissue

characteristic: source

text: Liver

text: Liver

characteristic: tissue


characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Mouse Hepatic Stellate Cells

characteristic: cell type

text: Total RNA from cultured cells was isolated using the TRIzol reagent (Life Techbologies) and the RNeasy Mini Kit (QIAGEN), followed by DNase treatment.

text: DMEM 10% FBS 5mM HEPES

text: Mus musculus

text: cell-line

text: Mouse Hepatic Stellate Cells


characteristic: External Id

text: dairy

characteristic: IFSAC+ Category

text: PulseNet Next Generation Subtyping Methods Unit

characteristic: INSDC center name

text: live

text: Pathogen.env

text: environmental/food/other

text: NYSDOH

characteristic: collected by

text: USA

text: milk

characteristic: isolation source

characteristic: ontological term

text: Listeria monocytogenes

text: food

characteristic: source type

characteristic: strain

text: Listeria monocytogenes


Gluconacetobacter hansenii AY201

text: University of Texas at Austin

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: Novacetimonas hansenii

characteristic: organism

text: cellulose overproducing isolate of Gluconacetobacter hansenii ATCC 23769 created by the RMB lab in 1980

text: cell culture

characteristic: sample type

text: Microbe sample from Novacetimonas hansenii

characteristic: title


name: Gluconacetobacter hansenii ATCC 53582 NQ5

text: University of Texas at Austin

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: collection date

characteristic: culture-collection

text: Australia: North Queensland

characteristic: geo loc name

text: sugar mill

text: Novacetimonas hansenii

text: cell culture


Trichosporon inkin ATCC 18020

characteristic: External Id

text: UNIVERSIDAD AUTONOMA DE NUEVO LEON

characteristic: INSDC center name

text: live

text: Pathogen.cl

text: Portugal

text: Homo sapiens

characteristic: host

text: female

characteristic: host sex

text: skin

text: Trichosporon inkin

text: ATCC 18020

text: Pathogen: clinical or host-associated sample from Trichosporon inkin


text: Tel Aviv University

characteristic: INSDC secondary accession

text: live

text: Viral

characteristic: SRA accession

text: USA

characteristic: isolate

text: HeLa S3

characteristic: isolation source

text: HeLa S3

characteristic: lab host

text: Poliovirus 2

characteristic: temp

text: Serial passaging of OPV2 Passage 2


text: environmental

characteristic: IFSAC+ Category

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: Thakur Molecular Epidemiology Lab

characteristic: collected by

text: Salmonella

characteristic: genus

text: USA:NC

text: other (non-clinical isolate)

text: soil

characteristic: ontological term

text: Salmonella enterica

characteristic: organism

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: environmental

characteristic: source type

characteristic: strain

value: chloramphenicol

value: susceptible

value: Salmonella enterica

value: cefoxitin

value: kanamycin

value: ceftriaxone

value: amoxicillin-clavulanic acid

value: trimethoprim-sulfamethoxazole


characteristic: External Id

text: environmental

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: USA

text: Pathogen.env

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: Thakur Molecular Epidemiology Lab

characteristic: collection date

text: Salmonella

text: USA:NC

characteristic: geo loc name

text: other (non-clinical isolate)

characteristic: host

characteristic: isolate

text: soil

text: Salmonella enterica

text: GenomeTrakr

text: environmental

characteristic: title

value: gentamicin

value: streptomycin


text: environmental

characteristic: IFSAC+ Category

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: USA

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: Thakur Molecular Epidemiology Lab

characteristic: collected by

text: Salmonella

characteristic: genus

text: USA:NC

text: other (non-clinical isolate)

text: soil

characteristic: isolation source

text: Salmonella enterica

text: GenomeTrakr

text: environmental

value: broth dilution


characteristic: External Id

text: environmental

characteristic: INSDC center name

text: live

text: USA

text: Pathogen.env

text: environmental/food/other

text: Thakur Molecular Epidemiology Lab

text: Salmonella

text: USA:NC

text: other (non-clinical isolate)

text: soil

characteristic: ontological term

text: Salmonella enterica

characteristic: organism

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: environmental

characteristic: source type

characteristic: strain

value: ampicillin


text: environmental

characteristic: INSDC secondary accession

text: live

text: USA

text: Pathogen.env

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: Thakur Molecular Epidemiology Lab

characteristic: collection date

text: Salmonella

text: USA:NC

characteristic: geo loc name

text: other (non-clinical isolate)

characteristic: host

characteristic: isolate

text: soil

text: Salmonella enterica

text: GenomeTrakr

text: environmental

characteristic: title


text: environmental

characteristic: IFSAC+ Category

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: Thakur Molecular Epidemiology Lab

characteristic: collected by

text: USA:NC

text: soil

characteristic: isolation source

text: Salmonella enterica

text: GenomeTrakr

text: environmental


characteristic: External Id

text: environmental

characteristic: INSDC center name

text: live

text: USA

text: Pathogen.env

text: environmental/food/other

text: Thakur Molecular Epidemiology Lab

text: Salmonella

characteristic: genus

text: USA:NC

text: other (non-clinical isolate)

text: soil

characteristic: ontological term

text: Salmonella enterica

characteristic: organism

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: environmental

characteristic: source type


text: environmental

characteristic: INSDC secondary accession

text: live

text: USA

text: Pathogen.env

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: Thakur Molecular Epidemiology Lab

characteristic: collection date

text: Salmonella

text: USA:NC

characteristic: geo loc name

text: other (non-clinical isolate)

characteristic: host

characteristic: isolate

text: soil

text: Salmonella enterica

text: GenomeTrakr

text: environmental

characteristic: strain


text: Tel Aviv University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Viral

characteristic: NCBI submission model

text: USA

text: HeLa S3

characteristic: isolation source

text: HeLa S3

characteristic: lab host

text: Poliovirus 2

characteristic: temp

text: Serial passaging of OPV2 Passage 4

characteristic: title


characteristic: External Id

text: Tel Aviv University

characteristic: INSDC center name

text: live

text: Viral

text: USA

text: HeLa S3

text: HeLa S3

text: Poliovirus 2

characteristic: organism

text: Serial passaging of OPV2 Passage 5


text: Tel Aviv University

characteristic: INSDC secondary accession

text: live

text: Viral

characteristic: NCBI submission package

characteristic: SRA accession

text: USA

text: HeLa S3

text: HeLa S3

text: Poliovirus 2

text: Serial passaging of OPV2 Passage 6


text: Tel Aviv University

text: live

text: Viral

characteristic: collection date

text: USA

characteristic: geo loc name

text: HeLa S3

text: HeLa S3

text: Poliovirus 2

text: Serial passaging of OPV2 Passage 7


Farallon

text: USAMRIID

text: live

text: Pathogen.cl

text: H. N. Johnson

characteristic: collected by

text: USA: Farallon Islands, California

text: Alectorobius capensis

characteristic: host

text: pool (2 females, 2 males, and 16 nymphs)

text: Farallon virus

characteristic: strain

text: Pathogen: clinical or host-associated sample from Farallon virus


Great Saltee

text: USAMRIID

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.cl

text: Ireland: Great Saltee Is.

text: Alectorobius maritimus

text: Great Saltee virus

text: RML 59972-6

text: Pathogen: clinical or host-associated sample from Great Saltee virus


Punta Salinas

text: USAMRIID

text: live

text: Pathogen.cl

characteristic: NCBI submission model

text: Harald N. Johnson

text: Peru: Punta Salinas, Huacho

text: Alectorobius amblus

text: pool of 10 Adult tick

characteristic: isolation source

text: 11 S 78 W

characteristic: lat lon

text: Punta Salinas virus

text: Ar 888

text: Pathogen: clinical or host-associated sample from Punta Salinas virus


Raza

characteristic: External Id

text: USAMRIID

text: live

text: Pathogen.cl

text: Mexico: Raza Island

text: Alectorobius denmarki

text: Raza virus

text: Pathogen: clinical or host-associated sample from Raza virus

characteristic: title


Soldado

text: USAMRIID

characteristic: INSDC center name

text: live

text: Pathogen.cl

text: Trinidad Regional Virus Laboratory

text: Trinidad and Tobago: Trinidad, Soldado Rock

text: Alectorobius capensis

text: Nymphs

text: 10.70 N 62.93 W

text: Soldado virus

characteristic: organism

text: TRVL 52214

text: Pathogen: clinical or host-associated sample from Soldado virus


text: animal feed

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: FDA

characteristic: fda lab id

text: Canada

text: pet food dog

text: dog food:FOODON_03302645, pet food:FOODON_00002682

characteristic: ontological term

text: Salmonella enterica

text: GenomeTrakr

characteristic: project name

text: United States Food and Drug Administration|Office of Regulatory Affairs|Northeast Food and Feed Laboratory

characteristic: sequenced by

text: Animal feed

characteristic: source type


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: Dept. Vet. Sciences, UNITO

characteristic: collected by

characteristic: collection date

text: Italy

characteristic: geo loc name

text: U8, 386.a

text: swab (meat plant)

text: Listeria seeligeri

text: GenomeTrakr

characteristic: strain

text: Pathogen: environmental/food/other sample from Listeria seeligeri


characteristic: External Id

text: veterinary clinical/research, cow

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: FLUFL

text: USA: FL

text: Bos taurus

characteristic: host

text: fecal steer

characteristic: isolation source

text: feces:UBERON_0001988, cattle steer:FOODON_00002531

text: Escherichia coli O157:H7

text: animal

text: Pathogen: environmental/food/other sample from Escherichia coli O157:H7

characteristic: title


text: beef

characteristic: IFSAC Category

characteristic: INSDC secondary accession

text: live

characteristic: Isolate name alias

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:MN

text: boneless beef

text: beef food product:FOODON_00001041

characteristic: ontological term

text: Salmonella enterica

characteristic: organism

text: environmental/food/other

characteristic: package

text: food

text: Pathogen: environmental/food/other sample from Salmonella enterica


text: beef

characteristic: IFSAC+ Category

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

characteristic: collection date

text: USA:WA

text: boneless beef

text: beef food product:FOODON_00001041

text: Salmonella enterica

text: environmental/food/other

text: food

characteristic: source type


characteristic: External Id

text: chicken

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:IN

characteristic: geo loc name

text: ground chicken

text: chicken (ground or minced):FOODON_03311826

text: Salmonella enterica

text: environmental/food/other

text: food

characteristic: strain


text: chicken

characteristic: IFSAC Category

characteristic: INSDC secondary accession

text: live

characteristic: Isolate name alias

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:IN

text: ground chicken

characteristic: isolation source

text: Salmonella enterica

text: environmental/food/other

text: food

characteristic: title


text: animal feed

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:CA

text: meat feed

text: meat food product:foodon_00001006, food product for animal:foodon_03309997

characteristic: ontological term

text: Salmonella enterica

characteristic: organism

text: environmental


text: beef

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

characteristic: collection date

text: USA:NE

text: boneless beef

text: beef food product:FOODON_00001041

text: Salmonella enterica

text: environmental/food/other

characteristic: package

text: food


characteristic: External Id

text: beef

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:NE

text: boneless beef

text: beef food product:FOODON_00001041

text: Salmonella enterica

text: environmental/food/other

text: food

characteristic: source type


text: beef

characteristic: INSDC secondary accession

text: live

characteristic: Isolate name alias

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:NE

characteristic: geo loc name

text: boneless beef

text: beef food product:FOODON_00001041

text: Salmonella enterica

text: food

characteristic: strain


text: beef

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:MN

text: boneless beef

characteristic: isolation source

text: beef food product:FOODON_00001041

text: Salmonella enterica

text: environmental/food/other

text: food

characteristic: title


text: veterinary clinical/research, cow

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: Dept. Vet. Sciences, UNITO

characteristic: collected by

text: Italy

text: U61, 37.1

text: stool bovine

text: feces:UBERON_0001988, bovine:FOODON_03414374

characteristic: ontological term

text: Listeria seeligeri

characteristic: organism

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: animal


characteristic: External Id

text: crustaceans

characteristic: IFSAC Category

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: FDA

characteristic: collection date

characteristic: fda lab id

text: Bangladesh

text: frozen shrimp

text: shrimp (frozen):FOODON_03301169

text: Salmonella enterica

text: environmental/food/other

characteristic: package

text: GenomeTrakr

text: United States Food and Drug Administration|Office of Regulatory Affairs|Pacific Southwest Food and Feed Laboratory

text: food


text: fish

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: FDA

text: Viet Nam

characteristic: geo loc name

text: round scad

characteristic: isolation source

text: round scad:FOODON_03412481

text: Salmonella enterica

text: environmental/food/other

text: GenomeTrakr

text: food

characteristic: source type

characteristic: strain


text: Fujian Academy of Agricultural Sciences

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Fujian Academy of Agricultural Sciences

characteristic: biomaterial provider

characteristic: culture-collection

text: Germany

text: soil

text: Peribacillus frigoritolerans

text: obtained from DSM in 2015; FJAT-2396 is the lab designation

text: cell culture

characteristic: sample type

text: Microbe sample from Peribacillus frigoritolerans

characteristic: title

text: type strain of Brevibacterium frigoritolerans

characteristic: type material


characteristic: External Id

text: fish

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FLAG

characteristic: collected by

text: USA:FL

text: nova smoked salmon

text: salmon (smoked):FOODON_03301805

characteristic: ontological term

text: Listeria monocytogenes

characteristic: organism

text: environmental/food/other

text: food

text: Pathogen: environmental/food/other sample from Listeria monocytogenes


text: fish

text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: WA

characteristic: collection date

text: USA

characteristic: geo loc name

text: salmon

characteristic: isolation source

text: salmon food product:foodon_00002220

text: Listeria monocytogenes

text: food

characteristic: source type

characteristic: strain

text: Listeria monocytogenes


text: environmental

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: USA

text: Pathogen.env

text: environmental/food/other

text: Thakur Molecular Epidemiology Lab

text: Salmonella

characteristic: genus

text: USA:NC

text: other (non-clinical isolate)

characteristic: host

characteristic: isolate

text: lagoon

text: Salmonella enterica

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: environmental

characteristic: title


characteristic: External Id

text: environmental

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: USA

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: Thakur Molecular Epidemiology Lab

characteristic: collected by

text: Salmonella

text: USA:NC

text: other (non-clinical isolate)

text: soil

characteristic: ontological term

text: Salmonella enterica

text: GenomeTrakr

text: environmental


text: environmental

text: live

text: USA

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: Thakur Molecular Epidemiology Lab

characteristic: collection date

text: Salmonella

text: USA:NC

characteristic: geo loc name

text: other (non-clinical isolate)

text: soil

characteristic: isolation source

text: Salmonella enterica

characteristic: organism

text: GenomeTrakr

text: environmental

characteristic: source type

characteristic: strain

value: resistant


text: environmental

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: Thakur Molecular Epidemiology Lab

text: USA:NC

text: soil

text: Salmonella enterica

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: environmental

characteristic: title


Hymenobacter

characteristic: External Id

text: Korea Polar Research Institute

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: Comlete genome of Hymenobacter sp.

characteristic: description

text: Antarctica

text: Lichen

characteristic: host

text: Hymenobacter psoromatis

text: single cell

characteristic: sample type

text: PAMC 26554

text: Microbe sample from Hymenobacter psoromatis

text: type strain of Hymenobacter psoromatis

characteristic: type-material


text: environmental

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: Thakur Molecular Epidemiology Lab

characteristic: collected by

characteristic: collection date

text: USA:NC

characteristic: geo loc name

text: soil

characteristic: ontological term

text: Salmonella enterica

text: GenomeTrakr

text: Worthington

characteristic: serovar

text: environmental


name: Leptospira alstonii serovar Room22 GWTS #1

characteristic: External Id

text: USDA

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.cl

text: Siobhan Regan

text: Ireland: County Tipperary

text: Crocidura russula

text: Leptospirosis

characteristic: host disease

text: Kidney

text: Kidney of a greater white-toothed shrew

characteristic: isolation source

text: 52.63 N 7.69 W

characteristic: lat lon

text: serovar Room22

characteristic: note

text: Leptospira tipperaryensis

characteristic: organism

characteristic: strain

text: Pathogen: Isolate of Leptospira alstonii from the kidney of a greater white-toothed shrew

characteristic: title

text: type strain of Leptospira tipperaryensis

characteristic: type material


text: University of Exeter

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: United Kingdom: London

text: Eriocheir sinensis

characteristic: host

text: invasive Chinese mitten crabs from the Thames River

text: Hepatospora eriocheir

text: spores

characteristic: sample type

text: Microbe sample from Hepatospora eriocheir


characteristic: External Id

text: environmental-factory/production facility

characteristic: IFSAC+ Category

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: NYSDOH

characteristic: collected by

characteristic: collection date

text: USA

characteristic: geo loc name

text: environmental swab sponge

text: environmental (swab or sampling):genepio_0001732

characteristic: ontological term

text: Listeria monocytogenes

text: environmental

characteristic: source type

text: Listeria monocytogenes


text: University of Florida

characteristic: INSDC center name

text: live

text: Generic

text: Aplysia californica

characteristic: organism

text: Single Neurons Isolated from CNS

text: Single Neuron Isolated from CNS

characteristic: tissue type

characteristic: title


text: University of Florida

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Aplysia californica

text: Developmental Stages


characteristic: External Id

text: University of Florida

text: live

text: Generic

characteristic: SRA accession

text: Aplysia californica

text: Developmental Stages

text: St6B_5 hr_swimmer


text: University of Florida

characteristic: INSDC first public

text: live

text: Generic

text: Aplysia californica

text: Developmental Stages

text: St6B_5 hr_attached


text: University of Florida

characteristic: INSDC last update

text: live

text: Generic

text: Aplysia californica

text: Developmental Stages

text: St7_24 hr

text: St7_24 hr


text: University of Florida

text: live

text: Generic

text: Aplysia californica

text: Developmental Stages

text: St 8_46hr_10-animals


text: University of Florida

text: live

text: Generic

text: Aplysia californica

text: Isolated Tissue

text: Eye

text: Eye


text: University of Florida

text: live

text: Generic

text: Aplysia californica

text: Isolated Tissue

text: Statocyst

text: Statocyst


text: University of Florida

text: live

text: Generic

text: Aplysia californica

text: Isolated Tissue

text: Foot

text: Foot


text: University of Florida

text: live

text: Generic

text: Aplysia californica

text: Isolated Tissue

text: Mantle

text: Mantle


text: University of Florida

text: live

text: Generic

text: Aplysia californica

text: Isolated Tissue


text: University of Florida

text: live

text: Generic

text: Aplysia californica

text: Isolated Ganglion

text: Isolated Ganglion


control laboratory strain

text: Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Age

text: live

text: Microbe, viral or environmental

text: Russia

text: Mycoplasmoides gallisepticum S6

text: cell culture

characteristic: sample type

characteristic: strain

text: Microbe sample from Mycoplasmoides gallisepticum S6


24-h acute infection

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: Russia

characteristic: geo loc name

text: Mycoplasmoides gallisepticum S6

text: cell culture


text: environmental-water

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA

characteristic: collected by

text: USA:VA

text: sediment

characteristic: isolation source

characteristic: ontological term

text: Salmonella enterica

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: environmental

characteristic: source type

text: Pathogen: environmental/food/other sample from Salmonella enterica


characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: FDA

text: USA:VA

text: creek water

text: Salmonella enterica

characteristic: organism

text: GenomeTrakr

characteristic: title


characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: FDA

text: USA:VA

text: creek water

text: Salmonella enterica

text: GenomeTrakr


text: Pathology, Tulane Health Sciences Center

text: live

text: Generic

characteristic: SRA accession

text: Akata cells

characteristic: cell type

text: Homo sapiens


text: live

text: Generic

text: Akata cells

text: Homo sapiens

text: Poly(A)-selected 0

text: Poly(A)-selected 0


text: live

text: Generic

text: Akata cells

text: Homo sapiens

text: Poly(A)-selected 5m

text: Poly(A)-selected 5m


text: live

text: Generic

text: Akata cells

text: Homo sapiens

text: Poly(A)-selected 30m

text: Poly(A)-selected 30m


text: live

text: Generic

text: Akata cells

text: Homo sapiens

text: Poly(A)-selected 1h

text: Poly(A)-selected 1h


text: live

text: Generic

text: Akata cells

text: Homo sapiens

text: Poly(A)-selected 2h

text: Poly(A)-selected 2h


text: live

text: Generic

text: Akata cells

text: Homo sapiens

text: Poly(A)-selected 4h

text: Poly(A)-selected 4h


text: live

text: Generic

text: Akata cells

text: Homo sapiens

text: Poly(A)-selected 8h

text: Poly(A)-selected 8h


text: live

text: Generic

text: Akata cells

text: Homo sapiens

text: Poly(A)-selected 24h

text: Poly(A)-selected 24h


text: live

text: Generic

text: Akata cells

text: Homo sapiens

text: Poly(A)-selected 48h

text: Poly(A)-selected 48h


text: live

text: Generic

text: Akata cells

text: Homo sapiens

text: Uninduced negative control GapmeR 1

text: Uninduced negative control GapmeR 1


text: live

text: Generic

text: Akata cells

text: Homo sapiens

text: Uninduced negative control GapmeR 2

text: Uninduced negative control GapmeR 2


text: live

text: Generic

text: Akata cells

text: Homo sapiens

text: Uninduced negative control GapmeR 3

text: Uninduced negative control GapmeR 3


text: live

text: Generic

text: Akata cells

text: Homo sapiens

text: Induced negative control GapmeR 1

text: Induced negative control GapmeR 1


text: live

text: Generic

text: Akata cells

text: Homo sapiens

text: Induced negative control GapmeR 2

text: Induced negative control GapmeR 2


text: live

text: Generic

text: Akata cells

text: Homo sapiens

text: Induced negative control GapmeR 3

text: Induced negative control GapmeR 3


text: live

text: Generic

text: Akata cells

text: Homo sapiens

text: Induced BZLT12-22 GapmeR 1

text: Induced BZLT12-22 GapmeR 1


text: live

text: Generic

text: Akata cells

text: Homo sapiens

text: Induced BZLT12-22 GapmeR 2

text: Induced BZLT12-22 GapmeR 2


text: live

text: Generic

text: Akata cells

text: Homo sapiens

text: Induced BZLT12-22 GapmeR 3

text: Induced BZLT12-22 GapmeR 3


text: live

text: Generic

text: Akata cells

text: Homo sapiens

text: untreated

characteristic: treatmemt


text: live

text: Generic

text: Akata cells

text: Homo sapiens

text: DNAse


Pelagic bacteria

text: NCAOR

text: live

text: Metagenome or environmental

characteristic: collection date

text: Svalbard: Kongsfjorden

characteristic: geo loc name

text: seawater metagenome

text: Metagenome or environmental sample from seawater metagenome


text: live

characteristic: Isolate name alias

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:WA

text: environmental

characteristic: isolation source

text: Salmonella enterica

characteristic: strain


text: beef

characteristic: IFSAC Category

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:MN

text: beef

text: beef food product:FOODON_00001041

characteristic: ontological term

text: Salmonella enterica

text: environmental/food/other

characteristic: package

text: food

characteristic: source type


characteristic: External Id

text: beef

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:SD

text: beef

text: beef food product:FOODON_00001041

text: Salmonella enterica

characteristic: organism

text: environmental/food/other

text: food

characteristic: title


characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

characteristic: collection date

text: USA:CA

text: Lolla Rossa Lettuce

text: Salmonella enterica


text: University of Minnesota

text: live

text: Microbe, viral or environmental

text: USA

characteristic: geo loc name

text: Meleagris gallopavo

characteristic: host

text: ileum

characteristic: isolation source

text: Lactobacillus johnsonii

characteristic: strain

text: Microbe sample from Lactobacillus johnsonii


text: CAAS

characteristic: INSDC center name

text: live

text: Metagenome or environmental

text: China:Beijing

text: Apis cerana cerana

text: 39 N 116 E

characteristic: lat lon

text: bee metagenome

text: Metagenome or environmental sample from bee metagenome


text: University of New Hampshire

text: live

text: Microbe, viral or environmental

text: Carios capensis ticks collected from Pelecanus occidentalis

characteristic: description

text: coast

characteristic: env biome

text: USA: Georgia

text: Alectorobius capensis

text: Rickettsia hoogstraalii

text: Cell culture isolate

characteristic: sample type

text: Microbe sample from Rickettsia hoogstraalii


Pleurobrachia pileus

characteristic: External Id

text: UPMC

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Invertebrate

text: Micha?l Manuel

characteristic: biomaterial provider

text: France: Roscoff

text: Micha?l Manuel, Paul Simion

characteristic: identified by

text: Pleurobrachia pileus

text: Entire adults

characteristic: tissue

text: Invertebrate sample from Pleurobrachia pileus


text: dbGaP

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Cerebellum; Frontal cortex

characteristic: body site

text: GRU

text: SNP/CNV Genotypes (NGS)

characteristic: molecular data type

text: Homo sapiens

characteristic: organism

text: male

characteristic: sex

text: Control Set

characteristic: study design

text: NABEC: Genome-Wide Genotyping

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: DNA sample from Cerebellum; Frontal cortex of a human male participant in the dbGaP study NABEC: Genome-Wide Genotyping

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Generic

text: DNA

text: Cerebellum; Frontal cortex

text: GRU

text: SNP/CNV Genotypes (NGS)

text: Homo sapiens

text: female

text: Control Set

text: NABEC: Genome-Wide Genotyping

text: DNA sample from Cerebellum; Frontal cortex of a human female participant in the dbGaP study NABEC: Genome-Wide Genotyping


text: dbGaP

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

characteristic: analyte type

text: GRU

text: SNP/CNV Genotypes (NGS)

text: Homo sapiens

text: female

text: Control Set

text: NABEC: Genome-Wide Genotyping

text: DNA sample from Cerebellum; Frontal cortex; Caudal pons; Temporal cortex of a human female participant in the dbGaP study NABEC: Genome-Wide Genotyping


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

characteristic: body site

text: GRU

text: SNP/CNV Genotypes (NGS)

characteristic: molecular data type

text: Homo sapiens

text: male

text: Control Set

text: NABEC: Genome-Wide Genotyping

text: DNA sample from Cerebellum; Frontal cortex; Caudal pons; Temporal cortex of a human male participant in the dbGaP study NABEC: Genome-Wide Genotyping


text: University of Tartu

text: live

text: Metagenome or environmental

characteristic: collection date

text: Sample of an ectomycorrhizal root tip including plant root, bacteria and other contaminating microorganisms

characteristic: description

text: Australia:Tasmania,Mount Field National Park

characteristic: geo loc name

text: Nothofagus cunninghamii

characteristic: host

text: Ectomycorrhiza of Tulasnellaceae

characteristic: isolation source

text: 42.682 S 146.703 E

characteristic: lat lon

text: fungus metagenome

characteristic: organism


characteristic: External Id

text: University of Tartu

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: Nothofagus cunninghamii

text: Ectomycorrhiza of Helotiales

text: 42.682 S 146.703 E

text: fungus metagenome

characteristic: title


text: University of Tartu

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Australia:Tasmania,Warra

text: Nothofagus cunninghamii

text: Ectomycorrhiza of Helotiales

text: 43.667 S 146.667 E

text: fungus metagenome


text: University of Tartu

text: live

text: Metagenome or environmental

text: Australia:Tasmania,Warra

text: Nothofagus cunninghamii

text: Ectomycorrhiza of Endogonales

text: 43.667 S 146.667 E

text: fungus metagenome


text: University of Wisconsin-Madison

characteristic: INSDC secondary accession

text: live

text: MIGS.eu

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: elev

characteristic: env biome

characteristic: env feature

text: Bark

characteristic: estimated size

text: Argentina: Villa Pehuenia

text: Nothofagus obliqua

text: PMID: 25743785

text: Patagonia B

characteristic: isolate

text: 38.83522 S 71.26536 W

text: Saccharomyces eubayanus

text: diploid

characteristic: ploidy

text: eukaryote: asexual

characteristic: propagation

text: MIGS Eukaryotic sample from Saccharomyces eubayanus


characteristic: External Id

text: University of Wisconsin-Madison

text: live

text: MIGS.eu

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Soil

text: Argentina: Villa Pehuenia

characteristic: geo loc name

text: Nothofagus obliqua

characteristic: host

text: PMID: 25743785

text: Patagonia A

text: 38.83522 S 71.26536 W

characteristic: lat lon

text: Saccharomyces eubayanus

characteristic: organism

text: diploid

text: eukaryote: asexual


text: Massachusetts Institute of Technology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: 200 m

characteristic: depth

text: Keywords: GSC:MIxS;MIGS:6.0

text: Marine

text: oceanic pelagic zone

text: sea water

text: Pacific Ocean: near Hawaii

text: 22.7366 N 157.9142 W

text: Stutzerimonas frequens

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Stutzerimonas frequens

characteristic: title


text: Zhou, Molecular Biology and Biochemistry, Peking University Health Science Center

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: E14 mES-derived cardiac progenitor cells

characteristic: cell type

text: Non

characteristic: chip antibody

text: Mus musculus

text: Cardiac progenitor cells

text: Input ChIP-seq


characteristic: External Id

text: live

text: Generic

text: ISL1 Abcam ab109517

text: Mus musculus

text: Cardiac progenitor cells

text: ISL1 ChIP-seq


text: University of Exeter

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: United Kingdom: Weymouth

characteristic: geo loc name

text: Cancer pagurus

characteristic: host

text: spores

characteristic: isolation source

text: Enterospora canceri

text: spores

characteristic: sample type

text: Microbe sample from Enterospora canceri


text: University of Virginia

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Viral

text: on CAF cells replicate 1

characteristic: isolate

text: E coli ER2738

characteristic: lab host

text: Inovirus M13

characteristic: organism

text: Viral sample from Inovirus M13


text: University of Virginia

text: live

characteristic: INSDC status

text: Viral

characteristic: NCBI submission model

characteristic: NCBI submission package

text: on CAF cells replicate 2

text: E coli ER2738

text: Inovirus M13

text: Viral sample from Inovirus M13

characteristic: title


text: University of Virginia

characteristic: INSDC secondary accession

text: live

text: Viral

characteristic: SRA accession

text: on CAF cells replicate 3

text: E coli ER2738

text: Inovirus M13

text: Viral sample from Inovirus M13


characteristic: External Id

text: University of Virginia

text: live

text: Viral

text: on MRC5 cells

text: E coli ER2738

text: Inovirus M13

text: Viral sample from Inovirus M13


text: University of Virginia

text: live

text: Viral

text: on HPDE cells

text: E coli ER2738

text: Inovirus M13

text: Viral sample from Inovirus M13


text: University of Virginia

text: live

text: Viral

text: on HUVECs

text: E coli ER2738

text: Inovirus M13

text: Viral sample from Inovirus M13


text: University of Virginia

text: live

text: Viral

text: on HUVECs with tumor-conditioned media

text: E coli ER2738

text: Inovirus M13

text: Viral sample from Inovirus M13


text: University of Virginia

text: live

text: Viral

text: on BXPC3 cells

text: E coli ER2738

text: Inovirus M13

text: Viral sample from Inovirus M13


text: University of Virginia

text: live

text: Viral

text: on YAPCs

text: E coli ER2738

text: Inovirus M13

text: Viral sample from Inovirus M13


text: University of Virginia

text: live

text: Viral

text: on L3.6 cells

text: E coli ER2738

text: Inovirus M13

text: Viral sample from Inovirus M13


text: University of Virginia

text: live

text: Viral

text: on streptavidin protein replicate 1

text: E coli ER2738

text: Inovirus M13

text: Viral sample from Inovirus M13


text: University of Virginia

text: live

text: Viral

text: on streptavidin protein replicate 2

text: E coli ER2738

text: Inovirus M13

text: Viral sample from Inovirus M13


text: University of Virginia

text: live

text: Viral

text: on streptavidin protein replicate 3

text: E coli ER2738

text: Inovirus M13

text: Viral sample from Inovirus M13


text: University of Virginia

text: live

text: Viral

text: on streptavidin protein replicate 4

text: E coli ER2738

text: Inovirus M13

text: Viral sample from Inovirus M13


text: University of Virginia

text: live

text: Viral

text: on VCAM replicate 1

text: E coli ER2738

text: Inovirus M13

text: Viral sample from Inovirus M13


text: University of Virginia

text: live

text: Viral

text: on VCAM replicate 2

text: E coli ER2738

text: Inovirus M13

text: Viral sample from Inovirus M13


text: University of Virginia

text: live

text: Viral

text: on VCAM replicate 3

text: E coli ER2738

text: Inovirus M13

text: Viral sample from Inovirus M13


text: University of Virginia

text: live

text: Viral

text: from naive library

text: E coli ER2738

text: Inovirus M13

text: Viral sample from Inovirus M13


text: The University of Edinburgh

text: live

text: Microbe, viral or environmental

text: John Prescott

characteristic: collected by

text: Canada: Nova Scotia

characteristic: geo loc name

text: Ovis aries

text: Prescottella equi

text: Culture

characteristic: strain

text: Microbe sample from Prescottella equi


text: clinical/research| human

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

text: live

text: Pathogen.cl

text: clinical/host-associated

text: Minnesota Department of Health

characteristic: collection date

text: USA:MN

text: Homo sapiens

characteristic: host

text: feces

characteristic: isolation source

characteristic: ontological term

text: Salmonella enterica

text: enteritidis

characteristic: serovar

text: human

characteristic: source type

text: Pathogen: clinical or host-associated sample from Salmonella enterica


NRRL 39664

text: US Department of Agriculture, Agriculture Research Service

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS.eu

text: MIGS/MIMS/MIMARKS.plant-associated

text: Novel species of Fusarium sp., strain NRRL 39664

characteristic: description

text: maize field

characteristic: env biome

text: field

characteristic: env feature

text: plant debris

text: 35 Mb

characteristic: estimated size

text: New Zealand: Levin

text: Maize

text: potato dextrose agar medium

text: 40.37 S 175.1600 E

characteristic: lat lon

text: Fusarium praegraminearum

characteristic: organism

text: haploid

characteristic: ploidy

text: eukaryote: asexual

characteristic: propagation

text: NRRL 39664

text: MIGS Eukaryotic sample from Fusarium praegraminearum

text: culture from holotype of Fusarium praegraminearum

characteristic: type material


characteristic: External Id

text: BioCI

characteristic: INSDC secondary accession

text: live

text: Plant

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Cornell University

characteristic: collected by

characteristic: collection date

text: Young plant, no chasmogamous flowers

characteristic: dev stage

text: USA: New York

characteristic: geo loc name

text: 16 hours grow light, room temperature

text: CSIRO acc. G1403

characteristic: isolate

text: Glycine sp. D3 (G. tomentella sensu lato)

characteristic: specimen voucher

text: young fully expanded leaves

characteristic: tissue

text: G. tomentella

characteristic: title


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: RNA:Total RNA

characteristic: analyte type

text: GTEx

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Cells - Leukemia cell line (CML)

characteristic: body site

text: GRU

text: Bone Marrow

characteristic: histological type

text: Yes

characteristic: is tumor

text: RNA Seq (NGS)

characteristic: molecular data type

text: Homo sapiens

characteristic: organism

text: female

characteristic: sex

text: Cross-Sectional

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

text: GTEx

characteristic: submitter handle

text: Tumor RNA:Total RNA sample from Cells - Leukemia cell line (CML) of a human female participant in the dbGaP study Common Fund (CF) Genotype-Tissue Expression Project (GTEx)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: RNA:Total RNA

text: GTEx

text: Cells - Leukemia cell line (CML)

text: GRU

text: Bone Marrow

text: Yes

text: RNA Seq (NGS)

text: Homo sapiens

text: female

text: Cross-Sectional

text: Common Fund (CF) Genotype-Tissue Expression Project (GTEx)

text: GTEx

characteristic: title


text: dairy

characteristic: IFSAC Category

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: IZS Torino

characteristic: collected by

characteristic: collection date

text: Italy

characteristic: geo loc name

text: raw milk

characteristic: isolation source

text: food (raw):FOODON_03311126, milk:UBERON_0001913

characteristic: ontological term

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: food

characteristic: source type

characteristic: strain

text: Pathogen: environmental/food/other sample from Listeria monocytogenes


characteristic: External Id

text: multi-ingredient| chicken

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

text: environmental/food/other

text: IZS Torino

text: Italy

text: chicken salad

text: chicken salad:FOODON_03306092

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

text: food


text: dairy

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: Istituto Zooprofilattico Sperimentale del Piemonte Liguria e Valle d'Aosta Torino | Universita degli Studi di Torino | Dipartimento di Scienze Veterinarie

text: Italy

text: IZS105, 27743

text: cheese

text: cheese food product:foodon_00001013

text: Listeria monocytogenes

text: GenomeTrakr

text: food

characteristic: title


text: Radboud University

text: live

characteristic: INSDC status

text: Generic

text: Post-natal day 8

characteristic: developmental stage

text: WT

characteristic: genotype/variation

text: Rattus norvegicus

text: PFC, WT8

text: Wistar

text: prefrontal cortex

characteristic: tissue


text: Radboud University

text: live

text: Generic

text: Post-natal day 14

text: WT

text: Rattus norvegicus

text: PFC, WT14

text: Wistar

text: prefrontal cortex


text: Radboud University

text: live

text: Generic

text: Post-natal day 21

text: WT

text: Rattus norvegicus

text: PFC, WT21

text: Wistar

text: prefrontal cortex


text: Radboud University

text: live

text: Generic

text: Post-natal day 35

text: WT

text: Rattus norvegicus

text: PFC, WT35

text: Wistar

text: prefrontal cortex


text: Radboud University

text: live

text: Generic

text: Post-natal day 70

text: WT

text: Rattus norvegicus

text: PFC, WT70

text: Wistar

text: prefrontal cortex


text: Radboud University

text: live

text: Generic

text: Post-natal day 35

text: SERT knock-out

text: Rattus norvegicus

text: PFC, SERT KO35

text: Wistar

text: prefrontal cortex


text: Radboud University

text: live

text: Generic

text: Post-natal day 70

text: SERT knock-out

text: Rattus norvegicus

text: PFC, SERT KO70

text: Wistar

text: prefrontal cortex


text: Radboud University

text: live

text: Generic

text: Post-natal day 21

text: SERT knock-out

text: Rattus norvegicus

text: PFC, SERT KO21

text: Wistar

text: prefrontal cortex


text: Radboud University

text: live

text: Generic

text: Post-natal day 8

text: SERT knock-out

text: Rattus norvegicus

text: PFC, SERT KO8

text: Wistar

text: prefrontal cortex


text: Radboud University

text: live

text: Generic

text: Post-natal day 14

text: SERT knock-out

text: Rattus norvegicus

text: PFC, SERT KO14

text: Wistar

text: prefrontal cortex


text: seeded vegetables (solanaceous)

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA

characteristic: collected by

characteristic: collection date

characteristic: fda lab id

text: Dominican Republic

characteristic: geo loc name

text: pepper

characteristic: isolation source

text: pepper (raw):FOODON_03309928

characteristic: ontological term

text: Salmonella enterica

text: GenomeTrakr

characteristic: project name

text: United States Food and Drug Administration|Office of Regulatory Affairs|Northeast Food and Feed Laboratory

characteristic: sequenced by

text: food

characteristic: source type

text: Pathogen: environmental/food/other sample from Salmonella enterica


characteristic: External Id

text: Stanford University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

text: iPSC derived cortical neuron

characteristic: cell type

text: non-diseased

characteristic: disease state

text: Homo sapiens

characteristic: organism

text: iPSC derived human cortical neuron

text: ATAC-SEQ in neuron Rep1


text: Stanford University

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: ATAC-SEQ in neuron Rep2

characteristic: title


text: Stanford University

text: live

text: Generic

text: CHD8 (Abcam, catalog# ab84527, lot# GR22849)

characteristic: chip antibody

text: non-diseased

text: Homo sapiens

text: human brain (Brodmann 44)

text: brain (Brodmann 44)

characteristic: tissue

text: CHIP-SEQ CHD8 in BA44


text: Stanford University

text: live

text: Generic

text: non-diseased

text: Homo sapiens

text: human brain (Brodmann 44)

text: brain (Brodmann 44)

text: CHIP-SEQ INPUT in BA44


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: CHIP-SEQ CHD8 in neuron


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: CHIP-SEQ INPUT in neuron (for CHD8 ctl)


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: H3K27Ac (ActiveMotif, catalog# 39133).

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: CHIP-SEQ H3K27AC in neuron


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: CHIP-SEQ INPUT in neuron (for H3K27AC ctl)


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: RNA-SEQ in neuron


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 00_L5


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 00_L6


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 00_L7


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 00_L8


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 00_L9


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 01_L5


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 01_L6


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 01_L7


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 01_L8


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 01_L9


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 02_L5


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 02_L6


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 02_L7


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 02_L8


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 02_L9


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 03_L5


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 03_L6


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 03_L7


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 03_L8


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 03_L9


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 04_L5


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 04_L6


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 04_L7


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 04_L8


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 04_L9


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 05_L5


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 05_L6


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 05_L7


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 05_L8


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 05_L9


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 06_L5


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 06_L6


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 06_L7


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 06_L8


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 06_L9


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 07_L5


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 07_L6


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 07_L7


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 07_L8


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 07_L9


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 08_L5


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 08_L6


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 08_L7


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 08_L8


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 08_L9


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 09_L5


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 09_L6


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 09_L7


text: Stanford University

text: live

text: Generic

text: iPSC derived cortical neuron

text: non-diseased

text: Homo sapiens

text: iPSC derived human cortical neuron

text: in situ Hi-C in neuron 09_L8


text: clinical/research, human

characteristic: IFSAC+ Category

text: Brigham & Women's Hospital

text: live

text: USA

text: Pathogen.cl

text: Xiaomin Zhao

characteristic: collected by

characteristic: collection date

text: Escherichia

characteristic: genus

text: USA:Boston

characteristic: geo loc name

text: Homo sapiens

characteristic: host

characteristic: host age

text: female

characteristic: host sex

characteristic: host subject id

characteristic: isolate

text: urine

characteristic: isolation source

text: urinary tract

characteristic: ontological term

text: Escherichia coli

text: human

characteristic: strain

text: Pathogen: clinical or host-associated sample from Escherichia coli

value: CLSI

value: mg/L

value: Vitek

value: Escherichia coli

value: ceftazidime

value: amikacin

value: nitrofurantoin

value: meropenem


characteristic: External Id

text: Monsanto

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Viral

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Strain:SP055-rpoZ-cMyc-Cry1Ac1(d123)-kanR

text: Escherichia coli S1030

characteristic: lab host

text: Inovirus M13

characteristic: organism

text: Viral sample from Inovirus M13


text: Monsanto

text: live

text: Viral

characteristic: collection date

text: Escherichia coli S1031

text: Inovirus M13

text: Viral sample from Inovirus M13

characteristic: title


text: Monsanto

text: live

text: Viral

characteristic: isolate

text: Escherichia coli S1032

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Monsanto

text: live

text: Viral

text: Escherichia coli S1033

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Monsanto

text: live

text: Viral

text: Escherichia coli S1034

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Monsanto

text: live

text: Viral

text: Escherichia coli S1035

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Monsanto

text: live

text: Viral

text: Escherichia coli S1036

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Monsanto

text: live

text: Viral

text: Escherichia coli S1037

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Monsanto

text: live

text: Viral

text: Escherichia coli S1038

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Monsanto

text: live

text: Viral

text: Escherichia coli S1039

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Monsanto

text: live

text: Viral

text: Escherichia coli S1040

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Monsanto

text: live

text: Viral

text: Escherichia coli S1041

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Monsanto

text: live

text: Viral

text: Escherichia coli S1042

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Monsanto

text: live

text: Viral

text: Escherichia coli S1043

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Monsanto

text: live

text: Viral

text: Escherichia coli S1044

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Monsanto

text: live

text: Viral

text: Escherichia coli S1045

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Monsanto

text: live

text: Viral

text: Escherichia coli S1046

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Monsanto

text: live

text: Viral

text: Escherichia coli S1047

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Monsanto

text: live

text: Viral

text: Escherichia coli S1048

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Monsanto

text: live

text: Viral

text: Escherichia coli S1049

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Monsanto

text: live

text: Viral

text: Escherichia coli S1050

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Monsanto

text: live

text: Viral

text: Escherichia coli S1051

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Monsanto

text: live

text: Viral

text: Escherichia coli S1052

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Monsanto

text: live

text: Viral

text: Escherichia coli S1053

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Monsanto

text: live

text: Viral

text: Escherichia coli S1054

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Monsanto

text: live

text: Viral

text: Escherichia coli S1055

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Monsanto

text: live

text: Viral

text: Escherichia coli S1056

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Monsanto

text: live

text: Viral

text: Escherichia coli S1057

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Monsanto

text: live

text: Viral

text: Escherichia coli S1058

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Monsanto

text: live

text: Viral

text: Escherichia coli S1059

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Monsanto

text: live

text: Viral

text: Escherichia coli S1060

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Monsanto

text: live

text: Viral

text: Escherichia coli S1061

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Monsanto

text: live

text: Viral

text: Escherichia coli S1062

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Monsanto

text: live

text: Viral

text: Escherichia coli S1063

text: Inovirus M13

text: Viral sample from Inovirus M13