characteristic: External Id

text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: RNA:Total RNA

text: GTEx

text: Artery - Tibial

text: GRU

text: Blood Vessel

text: No

characteristic: is tumor

text: Homo sapiens

text: male

text: Cross-Sectional

characteristic: study name

text: GTEx

characteristic: submitter handle

characteristic: title


status: PUBLIC

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: DNA:DNA Genomic

tag: attribute

characteristic: analyte type

text: GTEx

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Whole Blood

characteristic: body site

text: GRU

text: Blood

characteristic: histological type

text: No

text: Homo sapiens

characteristic: organism

text: male

characteristic: sex

text: Cross-Sectional

characteristic: study design

characteristic: submitted sample id

characteristic: submitted subject id

text: GTEx

text: Non-tumor DNA:DNA Genomic sample from Whole Blood of a human male participant in the dbGaP study Common Fund (CF) Genotype-Tissue Expression Project (GTEx)


characteristic: External Id

text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA:DNA Genomic

text: GTEx

text: Whole Blood

text: GRU

text: Blood

text: No

characteristic: is tumor

text: Homo sapiens

text: female

text: Cross-Sectional

text: GTEx

text: Non-tumor DNA:DNA Genomic sample from Whole Blood of a human female participant in the dbGaP study Common Fund (CF) Genotype-Tissue Expression Project (GTEx)


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: DNA:DNA Genomic

text: GTEx

text: Whole Blood

text: GRU

text: Blood

text: No

text: SNP/CNV Genotypes (NGS)

characteristic: molecular data type

text: Homo sapiens

text: male

text: Cross-Sectional

text: Common Fund (CF) Genotype-Tissue Expression Project (GTEx)

characteristic: study name

text: GTEx

characteristic: submitter handle

characteristic: title


text: dbGaP

characteristic: INSDC last update

text: live

text: Generic

text: DNA:DNA Genomic

characteristic: analyte type

text: GTEx

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Whole Blood

characteristic: body site

text: GRU

text: Blood

characteristic: histological type

text: No

text: SNP/CNV Genotypes (NGS)

text: Homo sapiens

characteristic: organism

text: male

characteristic: sex

text: Cross-Sectional

text: GTEX-WHWD

text: GTEx


characteristic: External Id

text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA:DNA Genomic

text: GTEx

text: Whole Blood

text: GRU

text: Blood

text: No

characteristic: is tumor

text: Homo sapiens

text: male

text: Cross-Sectional

characteristic: study design

characteristic: submitted sample id

text: GTEX-ZYFD

characteristic: submitted subject id

text: GTEx


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: DNA:DNA Genomic

text: GTEx

text: Whole Blood

text: GRU

text: Blood

text: No

text: SNP/CNV Genotypes (NGS)

characteristic: molecular data type

text: Homo sapiens

text: male

text: Cross-Sectional

characteristic: study name

text: GTEX-YFCO

text: GTEx

characteristic: submitter handle

characteristic: title


text: dbGaP

characteristic: INSDC last update

text: live

text: Generic

text: DNA:DNA Genomic

characteristic: analyte type

text: GTEx

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Whole Blood

characteristic: body site

text: GRU

text: Blood

characteristic: histological type

text: No

text: SNP/CNV Genotypes (NGS)

text: Homo sapiens

characteristic: organism

text: female

characteristic: sex

text: Cross-Sectional

text: GTEx


characteristic: External Id

text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA:DNA Genomic

text: GTEx

text: Whole Blood

text: GRU

text: Blood

text: No

characteristic: is tumor

text: Homo sapiens

text: male

text: Cross-Sectional

characteristic: study design

characteristic: submitted sample id

characteristic: submitted subject id

text: GTEx


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: RNA:Total RNA

text: GTEx

text: Thyroid

text: GRU

text: Thyroid

text: No

text: Homo sapiens

text: male

text: Cross-Sectional

characteristic: study name

text: GTEX-VUSG

text: GTEx

characteristic: submitter handle

text: Non-tumor RNA:Total RNA sample from Thyroid of a human male participant in the dbGaP study Common Fund (CF) Genotype-Tissue Expression Project (GTEx)

characteristic: title


text: dbGaP

characteristic: INSDC last update

text: live

text: Generic

text: RNA:Total RNA

characteristic: analyte type

text: GTEx

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Brain - Cerebellar Hemisphere

characteristic: body site

text: GRU

text: Brain

characteristic: histological type

text: No

text: Homo sapiens

characteristic: organism

text: male

text: Cross-Sectional

text: GTEx

text: Non-tumor RNA:Total RNA sample from Brain - Cerebellar Hemisphere of a human male participant in the dbGaP study Common Fund (CF) Genotype-Tissue Expression Project (GTEx)


characteristic: External Id

text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: RNA:Total RNA

text: GTEx

text: Lung

text: GRU

text: Lung

text: No

characteristic: is tumor

text: Homo sapiens

text: male

characteristic: sex

text: Cross-Sectional

characteristic: study design

text: GTEX-XXEK

text: GTEx

text: Non-tumor RNA:Total RNA sample from Lung of a human male participant in the dbGaP study Common Fund (CF) Genotype-Tissue Expression Project (GTEx)


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: RNA:Total RNA

text: GTEx

text: Heart - Left Ventricle

text: GRU

text: Heart

text: No

text: Homo sapiens

text: male

text: Cross-Sectional

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

text: GTEx

text: Non-tumor RNA:Total RNA sample from Heart - Left Ventricle of a human male participant in the dbGaP study Common Fund (CF) Genotype-Tissue Expression Project (GTEx)


text: dbGaP

characteristic: INSDC last update

text: live

text: Generic

text: DNA:DNA Genomic

characteristic: analyte type

text: GTEx

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Whole Blood

characteristic: body site

text: GRU

text: Blood

text: No

text: Homo sapiens

text: female

text: Cross-Sectional

text: GTEx

characteristic: submitter handle

characteristic: title


characteristic: External Id

text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: RNA:Total RNA

text: GTEx

text: Pancreas

text: GRU

text: Pancreas

characteristic: histological type

text: No

characteristic: is tumor

text: Homo sapiens

characteristic: organism

text: male

text: Cross-Sectional

text: GTEX-VUSG

text: GTEx

text: Non-tumor RNA:Total RNA sample from Pancreas of a human male participant in the dbGaP study Common Fund (CF) Genotype-Tissue Expression Project (GTEx)


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: DNA:DNA Genomic

text: GTEx

text: Whole Blood

text: GRU

text: Blood

text: No

text: Homo sapiens

text: male

characteristic: sex

text: Cross-Sectional

characteristic: study design

characteristic: study name

text: GTEX-YFCO

text: GTEx


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: RNA:Total RNA

characteristic: analyte type

text: GTEx

characteristic: biospecimen repository

text: Lung

text: GRU

text: Lung

text: No

text: Homo sapiens

text: female

text: Cross-Sectional

characteristic: submitted sample id

characteristic: submitted subject id

text: GTEx

text: Non-tumor RNA:Total RNA sample from Lung of a human female participant in the dbGaP study Common Fund (CF) Genotype-Tissue Expression Project (GTEx)


characteristic: External Id

text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: DNA:DNA Somatic

text: GTEx

characteristic: biospecimen repository sample id

text: Lung

characteristic: body site

text: GRU

text: Lung

text: No

text: SNP/CNV Genotypes (NGS)

characteristic: molecular data type

text: Homo sapiens

text: male

text: Cross-Sectional

text: GTEX-POYW

text: GTEx

characteristic: submitter handle

text: Non-tumor DNA:DNA Somatic sample from Lung of a human male participant in the dbGaP study Common Fund (CF) Genotype-Tissue Expression Project (GTEx)

characteristic: title


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

text: DNA:DNA Genomic

text: GTEx

text: Whole Blood

text: GRU

text: Blood

characteristic: histological type

text: No

characteristic: is tumor

text: SNP/CNV Genotypes (NGS)

text: Homo sapiens

characteristic: organism

text: male

characteristic: sex

text: Cross-Sectional

characteristic: study design

text: GTEX-XXEK

text: GTEx


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: RNA:Total RNA

characteristic: analyte type

text: GTEx

characteristic: biospecimen repository

text: Adipose - Subcutaneous

text: GRU

text: Adipose Tissue

text: No

text: Homo sapiens

text: male

text: Cross-Sectional

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

text: GTEx

text: Non-tumor RNA:Total RNA sample from Adipose - Subcutaneous of a human male participant in the dbGaP study Common Fund (CF) Genotype-Tissue Expression Project (GTEx)


characteristic: External Id

text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: DNA:DNA Somatic

text: GTEx

characteristic: biospecimen repository sample id

text: Lung

characteristic: body site

text: GRU

text: Lung

text: No

text: SNP/CNV Genotypes (NGS)

characteristic: molecular data type

text: Homo sapiens

text: male

text: Cross-Sectional

text: GTEx

characteristic: submitter handle

characteristic: title


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

text: DNA:DNA Genomic

text: GTEx

text: Whole Blood

text: GRU

text: Blood

characteristic: histological type

text: No

characteristic: is tumor

text: SNP/CNV Genotypes (NGS)

text: Homo sapiens

characteristic: organism

text: male

characteristic: sex

text: Cross-Sectional

characteristic: study design

text: GTEx


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: RNA:Total RNA

characteristic: analyte type

text: GTEx

characteristic: biospecimen repository

text: Lung

text: GRU

text: Lung

text: No

text: Homo sapiens

text: male

text: Cross-Sectional

characteristic: study name

characteristic: submitted sample id

text: GTEX-WFON

characteristic: submitted subject id

text: GTEx


characteristic: External Id

text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: RNA:Total RNA

text: GTEx

characteristic: biospecimen repository sample id

text: Thyroid

characteristic: body site

text: GRU

text: Thyroid

text: No

text: Homo sapiens

text: male

text: Cross-Sectional

text: GTEx

characteristic: submitter handle

characteristic: title


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

text: GTEx

text: Yes

characteristic: is technical control

text: No

characteristic: is tumor

text: Homo sapiens

characteristic: organism

text: male

characteristic: sex

text: Cross-Sectional

text: GTEx

text: Non-tumor sample from a human male participant in the dbGaP study Common Fund (CF) Genotype-Tissue Expression Project (GTEx)


text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: DNA:DNA Genomic

characteristic: analyte type

text: GTEx

characteristic: biospecimen repository

text: Whole Blood

text: GRU

text: Blood

characteristic: histological type

text: No

text: SNP/CNV Genotypes (NGS)

characteristic: molecular data type

text: Homo sapiens

text: male

text: Cross-Sectional

characteristic: study design

characteristic: study name

text: GTEX-XBED

text: GTEx


characteristic: External Id

text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: DNA:DNA Genomic

text: GTEx

characteristic: biospecimen repository sample id

text: Whole Blood

characteristic: body site

text: GRU

text: Blood

text: No

text: SNP/CNV Genotypes (NGS)

text: Homo sapiens

text: female

text: Cross-Sectional

characteristic: submitted sample id

characteristic: submitted subject id

text: GTEx

characteristic: submitter handle

characteristic: title


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

text: RNA:Total RNA

text: GTEx

text: Skin - Sun Exposed (Lower leg)

text: GRU

text: Skin

text: No

characteristic: is tumor

text: Homo sapiens

characteristic: organism

text: male

characteristic: sex

text: Cross-Sectional

text: GTEx

text: Non-tumor RNA:Total RNA sample from Skin - Sun Exposed (Lower leg) of a human male participant in the dbGaP study Common Fund (CF) Genotype-Tissue Expression Project (GTEx)


characteristic: External Id

text: dbGaP

text: live

text: Generic

characteristic: SRA accession

text: RNA:Total RNA

characteristic: analyte type

text: GTEx

characteristic: biospecimen repository

text: Testis

text: GRU

text: Testis

characteristic: histological type

text: No

text: Homo sapiens

text: male

text: Cross-Sectional

characteristic: study design

characteristic: study name

text: GTEx

text: Non-tumor RNA:Total RNA sample from Testis of a human male participant in the dbGaP study Common Fund (CF) Genotype-Tissue Expression Project (GTEx)


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: DNA:DNA Genomic

text: GTEx

characteristic: biospecimen repository sample id

text: Whole Blood

characteristic: body site

text: GRU

text: Blood

text: No

text: SNP/CNV Genotypes (NGS)

characteristic: molecular data type

text: Homo sapiens

text: male

text: Cross-Sectional

characteristic: submitted sample id

text: GTEX-ZDTT

characteristic: submitted subject id

text: GTEx

characteristic: submitter handle


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission package

text: DNA:DNA Genomic

text: GTEx

text: Whole Blood

text: GRU

text: Blood

text: No

characteristic: is tumor

text: Homo sapiens

characteristic: organism

text: female

text: Cross-Sectional

text: GTEx

characteristic: title


HABR sample

characteristic: External Id

text: Henan Normal University

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

characteristic: SRA accession

characteristic: collection date

text: China: Xinxiang,Henan

characteristic: geo loc name

text: sludge

characteristic: host

text: Planctomycetota

text: Metagenome or environmental sample from Planctomycetota


text: environmental-factory/production facility

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: ApaI

text: Wisconsin State Laboratory of Hygiene

characteristic: collected by

text: USA:WI

text: sponge drain between retorts

characteristic: isolation source

text: plumbing drain:ENVO_01000924, sponge:NCIT_C42856

characteristic: ontological term

text: Listeria monocytogenes

text: AscI

characteristic: pfge primary enzyme pattern

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: environmental

characteristic: source type

characteristic: strain

text: Pathogen: environmental/food/other sample from Listeria monocytogenes


characteristic: External Id

text: beef

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: Texas Department of State Health Services

text: USA:TX

text: beef trim

text: beef trim:FOODON_03311508

text: Escherichia coli

characteristic: organism

text: environmental/food/other

characteristic: package

characteristic: serovar

text: food

text: Pathogen: environmental/food/other sample from Escherichia coli

characteristic: title


text: multi-ingredient

characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: SRA accession

characteristic: collected by

characteristic: collection date

text: USA:TX

characteristic: geo loc name

text: guaca pico

text: Listeria monocytogenes

text: food


characteristic: External Id

text: environmental

text: live

text: Pathogen.env

text: USA:TX

text: environmental swab

characteristic: isolation source

text: environmental (swab or sampling):GENEPIO_0001732

characteristic: ontological term

text: Listeria monocytogenes

text: environmental

characteristic: source type

characteristic: strain


text: multi-ingredient

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: USA:TX

text: fully cooked smoked

text: food (smoked):FOODON_03310311| fully heat-treated:FOODON_03440014

text: Listeria monocytogenes

characteristic: organism

text: food


text: multi-ingredient| poultry

characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

text: environmental/food/other

text: USA:TX

text: chicken sandwich

text: chicken:FOODON_03411457|sandwich:FOODON_03301906

text: Listeria monocytogenes

text: environmental/food/other

characteristic: package

text: food

characteristic: title


Cotesia rubecula bracovirus transcripts

text: NIOO-KNAW

text: live

characteristic: INSDC status

text: Viral

characteristic: NCBI submission model

text: Joke van Vugt

characteristic: collected by

text: Netherlands: Wageningen

text: Cotesia rubecula

characteristic: host

text: head

text: head

text: Bracoviriform rubeculae

text: Viral transcripts from Cotesia rubecula head transcriptome


name: Cotesia glomerata bracovirus transcripts

characteristic: External Id

text: NIOO-KNAW

text: live

text: Viral

text: Joke van Vugt

characteristic: collection date

text: Netherlands: Wageningen

characteristic: geo loc name

text: Cotesia glomerata

text: head

text: head

characteristic: isolation source

text: Bracoviriform glomeratae

text: Viral transcripts from Cotesia glomerata head transcriptome


text: beans

characteristic: INSDC center name

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FDA

characteristic: fda lab id

text: USA:CA

text: green bean

text: green bean pod:FOODON_03305806

characteristic: ontological term

text: Listeria monocytogenes

text: environmental/food/other

text: GenomeTrakr

characteristic: project name

text: United States Food and Drug Administration|Office of Regulatory Affairs|San Francisco Laboratory

characteristic: sequenced by

text: food

characteristic: source type

characteristic: strain


text: environmental

characteristic: IFSAC+ Category

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: FDA

text: USA:CA

text: environmental swab

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

text: environmental

characteristic: title


characteristic: External Id

text: environmental

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: FDA

characteristic: collected by

characteristic: collection date

text: USA:WA

characteristic: geo loc name

text: environmental swab

text: Listeria monocytogenes

text: GenomeTrakr

text: United States Food and Drug Administration|Office of Regulatory Affairs|Pacific Northwest Laboratory

text: environmental


text: environmental-water

characteristic: INSDC center name

text: live

text: Pathogen.env

text: FLUFL

text: USA:FL

text: river water

characteristic: isolation source

text: river water:ENVO_01000599

characteristic: ontological term

text: Salmonella enterica

text: environmental

text: Pathogen: environmental/food/other sample from Salmonella enterica


text: environmental-water

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FLUFL

text: USA:FL

text: river water

text: river water:envo_01000599

text: Salmonella enterica

text: environmental

characteristic: source type

characteristic: strain


text: environmental-water

characteristic: IFSAC+ Category

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: FLUFL

text: USA:FL

text: river water

text: river water:ENVO_01000599

text: Salmonella enterica

text: environmental


text: National Research Council of Italy

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Italy: Mar Piccolo of Taranto

text: marine sediment

text: 40.4781 N 17.2369 E

characteristic: lat lon

text: marine sediment metagenome

characteristic: organism

text: Metagenome or environmental sample from marine sediment metagenome


characteristic: External Id

text: National Research Council of Italy

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

text: Italy: Mar Piccolo of Taranto

text: marine sediment

text: 40.4789 N 17.2453 E

text: marine sediment metagenome

characteristic: title


text: National Research Council of Italy

characteristic: INSDC center name

text: live

text: Metagenome or environmental

characteristic: collection date

text: Italy: Mar Piccolo of Taranto

text: marine sediment

text: 40.4794 N 17.2606 E

text: marine sediment metagenome


text: National Research Council of Italy

text: live

text: Metagenome or environmental

text: Italy: Mar Piccolo of Taranto

text: marine sediment

characteristic: isolation source

text: 40.4839 N 17.2461 E

text: marine sediment metagenome


text: National Research Council of Italy

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: Italy: Mar Piccolo of Taranto

text: marine sediment

text: 40.4889 N 17.2558 E

text: marine sediment metagenome


text: National Research Council of Italy

text: live

text: Metagenome or environmental

text: Italy: Mar Piccolo of Taranto

text: marine sediment

text: 40.4969 N 17.2619 E

text: marine sediment metagenome


text: National Research Council of Italy

text: live

text: Metagenome or environmental

text: Italy: Mar Piccolo of Taranto

text: marine sediment

text: 40.48 N 17.2783 E

text: marine sediment metagenome


text: National Research Council of Italy

text: live

text: Metagenome or environmental

text: Italy: Mar Piccolo of Taranto

text: marine sediment

text: 40.485 N 17.2803 E

text: marine sediment metagenome


text: National Research Council of Italy

text: live

text: Metagenome or environmental

text: Italy: Mar Piccolo of Taranto

text: marine sediment

text: 40.4806 N 17.2953 E

text: marine sediment metagenome


text: National Research Council of Italy

text: live

text: Metagenome or environmental

text: Italy: Mar Piccolo of Taranto

text: marine sediment

text: 40.4831 N 17.2583 E

text: marine sediment metagenome


text: National Research Council of Italy

text: live

text: Metagenome or environmental

text: Italy: Mar Piccolo of Taranto

text: marine sediment

text: 40.4828 N 17.2403 E

text: marine sediment metagenome


text: Centre for genomic regulation (CRG)

text: live

text: Pathogen.cl

text: INRA

characteristic: collected by

text: sample 1

characteristic: description

text: France

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: Pneumonia

characteristic: host disease

text: CSF

text: 46.00 N 2.00 E

text: Mycoplasmoides pneumoniae

text: Pathogen: clinical or host-associated sample from Mycoplasmoides pneumoniae


text: Centre for genomic regulation (CRG)

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

text: INRA

text: sample 2

text: France

text: Homo sapiens

text: Pneumonia

text: Pericardial fluid

text: 46.00 N 2.00 E

text: Mycoplasmoides pneumoniae

characteristic: strain


characteristic: External Id

text: Centre for genomic regulation (CRG)

text: live

text: Pathogen.cl

characteristic: NCBI submission package

text: INRA

text: sample 3

text: Spain

text: Homo sapiens

text: Pneumonia

text: Synovial fluid

text: 40.00 N 4.00 W

characteristic: lat lon

text: Mycoplasmoides pneumoniae

characteristic: organism


text: Centre for genomic regulation (CRG)

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

text: INRA

text: sample 4

text: France

text: Homo sapiens

text: Pneumonia

text: Sternum wound

text: 46.00 N 2.00 E

text: Mycoplasmoides pneumoniae

characteristic: title


text: Centre for genomic regulation (CRG)

text: live

text: Pathogen.cl

characteristic: SRA accession

text: INRA

characteristic: collected by

characteristic: collection date

text: sample 5

text: France

text: Homo sapiens

text: Pneumonia

text: respiratory tract

characteristic: isolation source

text: 46.00 N 2.00 E

text: Mycoplasmoides pneumoniae


text: Centre for genomic regulation (CRG)

text: live

text: Pathogen.cl

text: INRA

text: sample 6

characteristic: description

text: France

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: Pneumonia

characteristic: host disease

text: Synovial fluid

text: 46.00 N 2.00 E

text: Mycoplasmoides pneumoniae


text: Centre for genomic regulation (CRG)

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

text: INRA

text: sample 7

text: France

text: Homo sapiens

text: Pneumonia

text: respiratory tract

text: 46.00 N 2.00 E

text: Mycoplasmoides pneumoniae

characteristic: strain


characteristic: External Id

text: Centre for genomic regulation (CRG)

text: live

text: Pathogen.cl

characteristic: NCBI submission package

text: INRA

text: sample 8

text: Japan

text: Homo sapiens

text: Pneumonia

text: respiratory tract

text: 45.31 N 141.55 E

characteristic: lat lon

text: Mycoplasmoides pneumoniae

characteristic: organism


text: Centre for genomic regulation (CRG)

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

text: INRA

text: sample 9

text: Japan

text: Homo sapiens

text: Pneumonia

text: respiratory tract

text: 45.31 N 141.55 E

text: Mycoplasmoides pneumoniae

characteristic: title


text: Centre for genomic regulation (CRG)

text: live

text: Pathogen.cl

characteristic: SRA accession

text: INRA

characteristic: collected by

characteristic: collection date

text: sample 10

text: Tunisia

text: Homo sapiens

text: Pneumonia

text: NPA

characteristic: isolation source

text: 34.00 N 9.00 E

text: Mycoplasmoides pneumoniae


text: Centre for genomic regulation (CRG)

text: live

text: Pathogen.cl

text: INRA

text: sample 11

characteristic: description

text: Tunisia

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: Pneumonia

characteristic: host disease

text: respiratory tract

text: 34.00 N 9.00 E

text: Mycoplasmoides pneumoniae


text: Centre for genomic regulation (CRG)

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

text: INRA

text: sample 12

text: France

text: Homo sapiens

text: Pneumonia

text: Expectoration

text: 46.00 N 2.00 E

text: Mycoplasmoides pneumoniae

characteristic: strain


characteristic: External Id

text: Centre for genomic regulation (CRG)

text: live

text: Pathogen.cl

characteristic: NCBI submission package

text: INRA

text: sample 13

text: Germany

text: Homo sapiens

text: Pneumonia

text: respiratory tract

text: 51.52 N 9.91 E

characteristic: lat lon

text: Mycoplasmoides pneumoniae

characteristic: organism


text: Centre for genomic regulation (CRG)

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

text: INRA

text: sample 14

text: Germany

text: Homo sapiens

text: Pneumonia

text: respiratory tract

text: 51.52 N 9.91 E

text: Mycoplasmoides pneumoniae

characteristic: title


text: Centre for genomic regulation (CRG)

text: live

text: Pathogen.cl

characteristic: SRA accession

text: INRA

characteristic: collected by

characteristic: collection date

text: sample 15

text: France

text: Homo sapiens

text: Pneumonia

text: throat

characteristic: isolation source

text: 46.00 N 2.00 E

text: Mycoplasmoides pneumoniae


text: Centre for genomic regulation (CRG)

text: live

text: Pathogen.cl

text: INRA

text: sample 16

characteristic: description

text: France

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: Pneumonia

characteristic: host disease

text: BAL

text: 46.00 N 2.00 E

text: Mycoplasmoides pneumoniae


text: Centre for genomic regulation (CRG)

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

text: INRA

text: sample 17

text: France

text: Homo sapiens

text: Pneumonia

text: throat

text: 46.00 N 2.00 E

text: Mycoplasmoides pneumoniae

characteristic: strain


characteristic: External Id

text: Centre for genomic regulation (CRG)

text: live

text: Pathogen.cl

characteristic: NCBI submission package

text: INRA

text: sample 18

text: France

text: Homo sapiens

text: Pneumonia

text: NPA

text: 46.00 N 2.00 E

characteristic: lat lon

text: Mycoplasmoides pneumoniae

characteristic: organism


text: Centre for genomic regulation (CRG)

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

text: INRA

text: sample 19

text: France

text: Homo sapiens

text: Pneumonia

text: BAL

text: 46.00 N 2.00 E

text: Mycoplasmoides pneumoniae

characteristic: title


text: Centre for genomic regulation (CRG)

text: live

text: Pathogen.cl

characteristic: SRA accession

text: INRA

characteristic: collected by

characteristic: collection date

text: sample 20

text: France

text: Homo sapiens

text: Pneumonia

text: NPA

characteristic: isolation source

text: 46.00 N 2.00 E

text: Mycoplasmoides pneumoniae


text: Centre for genomic regulation (CRG)

text: live

text: Pathogen.cl

text: INRA

text: sample 21

characteristic: description

text: France

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: Pneumonia

characteristic: host disease

text: NPA

text: 46.00 N 2.00 E

text: Mycoplasmoides pneumoniae


text: Centre for genomic regulation (CRG)

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

text: INRA

text: sample 22

text: France

text: Homo sapiens

text: Pneumonia

text: respiratory tract

text: 46.00 N 2.00 E

text: Mycoplasmoides pneumoniae

characteristic: strain


characteristic: External Id

text: Centre for genomic regulation (CRG)

text: live

text: Pathogen.cl

characteristic: NCBI submission package

text: INRA

text: sample 23

text: Denmark

text: Homo sapiens

text: Pneumonia

text: respiratory tract

text: 56.00 N 10.00 E

characteristic: lat lon

text: Mycoplasmoides pneumoniae

characteristic: organism


text: sub-tropical fruit

characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: FDA

characteristic: fda lab id

text: USA:MI

text: avocado

text: avocado (whole, raw):FOODON_03305236

characteristic: ontological term

text: Listeria monocytogenes

text: environmental/food/other

characteristic: package

text: GenomeTrakr

characteristic: project name

text: United States Food and Drug Administration|Office of Regulatory Affairs|Arkansas Laboratory

characteristic: sequenced by

text: food

characteristic: source type

characteristic: title


text: nuts

characteristic: IFSAC Category

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.plant-associated

characteristic: SRA accession

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Walnut blight

characteristic: env biome

text: Walnut tree

characteristic: env feature

text: Walnut blight lesion

text: Chile: Region del Bio Bio

characteristic: geo loc name

text: Walnut

characteristic: host

text: walnut tree

characteristic: isolation source

text: Originally submitted as Xanthomonas campestris but changed in July 2019 because of ANI results to Xanthomonas arboricola.

text: walnut tree:FOODON_03411290

text: Xanthomonas arboricola

text: environmental/food/other

text: GenomeTrakr

text: genomic DNA

text: food


characteristic: External Id

text: nuts

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

text: MIGS/MIMS/MIMARKS.plant-associated

characteristic: NCBI submission package

text: Keywords: GSC:MIxS;MIGS:6.0

text: Walnut blight

text: Walnut tree

text: Walnut blight lesion

text: Chile: Region Metropolitana

text: Walnut

text: walnut tree

text: walnut tree:FOODON_03411290

characteristic: ontological term

text: Xanthomonas arboricola

characteristic: organism

text: environmental/food/other

characteristic: package

text: GenomeTrakr

text: genomic DNA

text: food

characteristic: strain


XantSag

text: nuts

characteristic: IFSAC Category

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.plant-associated

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIGS:6.0

text: Walnut blight

text: Walnut tree

text: Walnut blight lesion

text: Chile

text: Walnut

text: walnut tree

text: walnut tree:FOODON_03411290

text: Xanthomonas arboricola

text: environmental/food/other

text: GenomeTrakr

characteristic: project name

text: genomic DNA

characteristic: sequenced by

text: food

characteristic: source type

text: XantSag

characteristic: title


characteristic: External Id

text: nuts

characteristic: INSDC center name

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.plant-associated

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Walnut blight

characteristic: env biome

text: Walnut tree

characteristic: env feature

text: Walnut blight lesion

text: Chile

characteristic: geo loc name

text: Walnut

characteristic: host

text: walnut tree

characteristic: isolation source

text: walnut tree:FOODON_03411290

text: Xanthomonas arboricola

text: environmental/food/other

text: GenomeTrakr

text: genomic DNA

text: food


text: nuts

characteristic: IFSAC Category

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

text: MIGS/MIMS/MIMARKS.plant-associated

characteristic: NCBI submission package

text: Keywords: GSC:MIxS;MIGS:6.0

text: Walnut blight

text: Walnut tree

text: Walnut blight lesion

text: Chile: Region del Maule

text: Walnut

text: walnut tree

text: walnut tree:FOODON_03411290

characteristic: ontological term

text: Pantoea sp. CFSAN033090

characteristic: organism

text: environmental/food/other

characteristic: package

text: GenomeTrakr

text: genomic DNA

text: food

characteristic: strain


characteristic: External Id

text: NCGR

characteristic: INSDC center name

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Plant

characteristic: SRA accession

text: 28 Days Old Leaf Tissue

characteristic: age

text: Amaranthus Cruentus

characteristic: cultivar

text: Amaranth Resequencing

text: USA: BYU Greenhouse Provo UT

text: Amaranthus cruentus

text: Leaf

characteristic: tissue

text: Plant sample from Amaranthus cruentus

characteristic: title


text: Fujian Academy of Agricultural Sciences

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: Germany

characteristic: geo loc name

text: a church wall mural

characteristic: isolation source

text: Alkalicoccobacillus murimartini

text: cell culture

characteristic: sample type

text: Microbe sample from Alkalicoccobacillus murimartini

text: type strain of Bacillus murimartini

characteristic: type material


text: University of Missouri - Columbia

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Juey-Shin Lin

characteristic: collected by

text: ATCC: 43523

characteristic: culture collection

text: Mycoplasma hominis 4195 isolated from vaginal swab from pregnant woman

characteristic: description

text: USA: Massachusetts

text: Homo sapiens

characteristic: host

text: pelvic inflammatory disease, arthritis

characteristic: host disease

text: female

characteristic: host sex

text: Vaginal swab of pregnant woman

text: 42.358056 N 71.063611 W

characteristic: lat lon

text: Metamycoplasma hominis

characteristic: organism

text: Pathogen: clinical or host-associated sample from Metamycoplasma hominis


characteristic: External Id

text: IGC, Salk Institute for Biological Studies

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

characteristic: biomaterial provider

text: Coriell Cell repositories; http://ccr.coriell.org/

text: iPSC

characteristic: cell type

text: CpG free neo cassette was excised by Cre transient expression

characteristic: genotype/variation

text: Homo sapiens

text: B-lymphocyte

characteristic: source cell type

text: AS HR1 neo ex iPSCs

text: HR AS iPS 9 neo ex

characteristic: title


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: iPSC

text: Homo sapiens

text: B-lymphocyte

text: AS HR2 neo ex iPSCs

text: HR AS iPS 15 neo ex


text: live

text: Generic

characteristic: cell line

text: human embryonic stem cell line

text: Homo sapiens

text: H1 ES

text: H1 ES


text: live

text: Generic

text: human embryonic stem cell line

text: CpG free neo cassette is integrated in MLH1 locus in H1 ESCs

text: Homo sapiens

text: H1 MLH HR1

text: H1 MLH HR1


text: live

text: Generic

text: human embryonic stem cell line

text: Homo sapiens

text: H1 MLH HR2

text: H1 MLH HR2


text: live

text: Generic

text: human embryonic stem cell line

text: Homo sapiens

text: H1 MLH HR2 neo ex

text: H1 MLH HR2 neo ex


text: live

text: Generic

text: colon cancer cell

text: Epimutation is observed in MLH1 locus.

text: Homo sapiens


text: Bioinformatics Core Facility, Core facilities, Centre for Genomic Regulation (CRG)

text: live

text: Generic

text: France

characteristic: country of isolation

text: BAL (bronchoalveolar)

characteristic: isolated from

text: Mycoplasmoides pneumoniae

text: M. pneumoniae culture

characteristic: strain

characteristic: strain type

text: Mycoplasma pneumoniae (strain 6009)_CRO6

characteristic: year


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: France

text: BAL (bronchoalveolar)

text: Mycoplasmoides pneumoniae

characteristic: organism

text: M. pneumoniae culture

text: Mycoplasma pneumoniae (strain 6009)_CRO8


characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: Spain

text: Synovial fluid

text: Mycoplasmoides pneumoniae

text: M. pneumoniae culture

text: Mycoplasma pneumoniae (strain 2882)_FIL6


text: live

text: Generic

text: Spain

text: Synovial fluid

text: Mycoplasmoides pneumoniae

text: M. pneumoniae culture

text: Mycoplasma pneumoniae (strain 2882)_FIL8

characteristic: title


text: live

characteristic: INSDC status

text: Generic

text: France

text: BAL (bronchoalveolar)

text: Mycoplasmoides pneumoniae

text: M. pneumoniae culture

text: Mycoplasma pneumoniae (strain 5817)_PAU6


text: live

text: Generic

characteristic: NCBI submission model

text: France

text: BAL (bronchoalveolar)

text: Mycoplasmoides pneumoniae

text: M. pneumoniae culture

text: Mycoplasma pneumoniae (strain 5817)_PAU8


text: live

text: Generic

characteristic: NCBI submission package

text: France

text: NAP (nasopharyngeal aspirate)

text: Mycoplasmoides pneumoniae

text: M. pneumoniae culture

text: Mycoplasma pneumoniae (strain 5954)_PER8


text: live

text: Generic

text: France

text: NAP (nasopharyngeal aspirate)

text: Mycoplasmoides pneumoniae

text: M. pneumoniae culture

text: Mycoplasma pneumoniae (strain 5954)_PER6


text: Greb, Centre for Organismal Studies, Heidelberg University

text: live

text: Generic

text: 7 days

characteristic: age

text: Col

characteristic: background ecotype

text: WT

characteristic: genotype

text: Arabidopsis thaliana

text: Seedlings

characteristic: tissue


text: live

text: Generic

text: 7 days

text: Col

text: Arabidopsis thaliana

text: Seedlings


text: live

text: Generic

text: 7 days

text: Col

text: smxl4-1 smxl5-1

text: Arabidopsis thaliana

text: Seedlings


text: FDA/CFSAN

text: live

text: Pathogen.env

characteristic: collection date

text: Whole genome sequencing of cultured Vibrio parahaemolyticus

characteristic: description

text: USA

characteristic: geo loc name

text: Vibrio parahaemolyticus

text: GenomeTrakr

characteristic: project name

text: FDA Center for Food Safety and Applied Nutrition

characteristic: sequenced by

characteristic: strain

text: Pathogen: environmental/food/other sample from Vibrio parahaemolyticus


characteristic: External Id

text: clinical/research, human

characteristic: IFSAC+ Category

text: FDA/CFSAN

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.cl

text: WASHINGTON

characteristic: State (cntn_id)

text: USA

text: Homo sapiens

characteristic: host

characteristic: ontological term

text: Vibrio parahaemolyticus

characteristic: organism

text: GenomeTrakr

text: human

characteristic: source type

text: Pathogen: clinical or host-associated sample from Vibrio parahaemolyticus


text: clinical/research| human

text: FDA/CFSAN

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

text: GEORGIA

text: clinical/host-associated

text: USA

text: Homo sapiens

text: stool

characteristic: isolation source

text: Vibrio parahaemolyticus

text: GenomeTrakr

text: human

characteristic: title


CDC__M12-108 G

text: clinical/research| human

text: FDA/CFSAN

text: live

text: Pathogen.cl

text: MISSOURI

text: clinical/host-associated

characteristic: collection date

characteristic: description

text: USA

characteristic: geo loc name

text: Homo sapiens

text: CDC__M12-108 G

text: stool

text: Vibrio parahaemolyticus

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: human


characteristic: External Id

text: clinical/research| human

characteristic: IFSAC+ Category

text: FDA/CFSAN

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.cl

text: CALIFORNIA

text: clinical/host-associated

text: USA

text: Homo sapiens

text: stool

text: Vibrio parahaemolyticus

text: GenomeTrakr

text: human

characteristic: strain


text: clinical/research| human

text: FDA/CFSAN

characteristic: INSDC last update

text: live

text: Pathogen.cl

text: MASSACHUSETTS

characteristic: State (cntn_id)

text: clinical/host-associated

text: USA

text: Homo sapiens

characteristic: host

text: stool

characteristic: ontological term

text: Vibrio parahaemolyticus

characteristic: organism

text: GenomeTrakr

text: human


text: clinical/research| human

text: FDA/CFSAN

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

text: CONNECTICUT

text: clinical/host-associated

text: USA

text: Homo sapiens

text: stool

characteristic: isolation source

text: Vibrio parahaemolyticus

text: GenomeTrakr

text: human

characteristic: source type


text: clinical/research| human

text: FDA/CFSAN

text: live

text: Pathogen.cl

text: WASHINGTON

text: clinical/host-associated

characteristic: collection date

characteristic: description

text: USA

characteristic: geo loc name

text: Homo sapiens

text: stool

text: Vibrio parahaemolyticus

text: GenomeTrakr

characteristic: project name

text: human

characteristic: title


characteristic: External Id

text: clinical/research, human

characteristic: IFSAC+ Category

text: FDA/CFSAN

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.cl

text: NEW YORK

text: USA

text: Homo sapiens

text: Vibrio parahaemolyticus

text: GenomeTrakr

characteristic: sequenced by

text: human


text: clinical/research| human

text: FDA/CFSAN

characteristic: INSDC last update

text: live

text: Pathogen.cl

text: WASHINGTON

characteristic: State (cntn_id)

text: clinical/host-associated

text: USA

text: Homo sapiens

characteristic: host

text: stool

characteristic: ontological term

text: Vibrio parahaemolyticus

text: GenomeTrakr

text: human

characteristic: strain


text: clinical/research| human

text: FDA/CFSAN

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

text: MISSOURI

text: clinical/host-associated

text: USA

text: Homo sapiens

text: stool

characteristic: isolation source

text: Vibrio parahaemolyticus

characteristic: organism

text: GenomeTrakr

text: human


text: clinical/research| human

text: FDA/CFSAN

text: live

text: Pathogen.cl

text: FLORIDA

text: clinical/host-associated

characteristic: collection date

characteristic: description

text: USA

characteristic: geo loc name

text: Homo sapiens

text: CDC__JBI 12000789

text: stool

text: Vibrio parahaemolyticus

text: GenomeTrakr

characteristic: project name

text: human

characteristic: source type


characteristic: External Id

text: clinical/research, human

characteristic: IFSAC+ Category

text: FDA/CFSAN

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.cl

text: MASSACHUSETTS

text: USA

text: Homo sapiens

text: Vibrio parahaemolyticus

text: GenomeTrakr

text: human

characteristic: title


text: clinical/research, human

text: FDA/CFSAN

characteristic: INSDC last update

text: live

text: Pathogen.cl

text: NEW JERSEY

characteristic: State (cntn_id)

text: USA

text: Homo sapiens

characteristic: host

characteristic: ontological term

text: Vibrio parahaemolyticus

text: GenomeTrakr

characteristic: sequenced by

text: human


text: clinical/research, human

text: FDA/CFSAN

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

text: NEW YORK

text: USA

text: Homo sapiens

text: Vibrio parahaemolyticus

text: GenomeTrakr

text: human

characteristic: strain


text: clinical/research, human

text: FDA/CFSAN

text: live

text: Pathogen.cl

characteristic: collection date

characteristic: description

text: Spain

characteristic: geo loc name

text: Homo sapiens

text: Vibrio parahaemolyticus

characteristic: organism

text: GenomeTrakr

text: human


characteristic: External Id

text: environmental-water

characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: FLUFL

characteristic: collected by

text: USA:FL

text: river water

characteristic: isolation source

text: river water:ENVO_01000599

text: Salmonella enterica

text: environmental

characteristic: source type

text: Pathogen: environmental/food/other sample from Salmonella enterica


text: environmental-water

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: FLUFL

text: USA:FL

text: river water

text: river water:envo_01000599

characteristic: ontological term

text: Salmonella enterica

text: environmental

characteristic: title


text: USDA

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: USA: Georgia

text: Arachis hypogaea

characteristic: host

characteristic: isolate

text: leaf

text: Nothopassalora personata

text: fungal culture

characteristic: sample type

text: Microbe sample from Nothopassalora personata


characteristic: External Id

text: Caltech

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: marine sediment

text: Idiomarina sp. FeN1

characteristic: organism

text: cultured cells

characteristic: strain

text: Microbe sample from Idiomarina FeN1w--77


text: Caltech

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: marine sediment

characteristic: isolation source

text: Thioclava electrotropha

text: cultured cells

text: Microbe sample from Thioclava SN12--68


text: seeded vegetables (solanaceous)

characteristic: IFSAC Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: UCD-CFS

characteristic: collected by

text: Ireland

characteristic: geo loc name

text: pepper

text: pepper (raw):FOODON_03309928

text: Listeria monocytogenes

text: environmental/food/other

characteristic: package

text: food

characteristic: source type

text: Pathogen: environmental/food/other sample from Listeria monocytogenes


text: multi-ingredient, meat

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: UCD-CFS

text: Ireland

text: cooked meat

text: meat (cooked):FOODON_03305103

characteristic: ontological term

text: Listeria monocytogenes

text: environmental/food/other

text: food

characteristic: title


characteristic: External Id

text: environmental

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

text: UCD-CFS

characteristic: collection date

text: Ireland

text: environmental swab

text: environmental (swab or sampling):GENEPIO_0001732

text: Listeria monocytogenes

characteristic: organism

text: environmental

characteristic: strain


text: seeded vegetables (solanaceous)

characteristic: IFSAC Category

characteristic: INSDC center name

text: live

text: Pathogen.env

text: UCD-CFS

text: United Kingdom

text: pepper

characteristic: isolation source

text: pepper (raw):FOODON_03309928

text: Listeria monocytogenes

text: environmental/food/other

text: food


text: multi-ingredient, meat

characteristic: INSDC first public

text: live

text: Pathogen.env

text: UCD-CFS

characteristic: collected by

text: United Kingdom

characteristic: geo loc name

text: cooked meat

text: meat (cooked):FOODON_03305103

text: Listeria monocytogenes

text: environmental/food/other

text: food


text: environmental

characteristic: INSDC last update

text: live

text: Pathogen.env

text: UCD-CFS

text: United Kingdom

text: environmental swab

text: Listeria monocytogenes

text: environmental

characteristic: source type


text: root/underground (bulbs)

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: UCD-CFS

text: Ireland

text: onion

text: onion (whole, raw):FOODON_03301704

text: Listeria monocytogenes

text: environmental/food/other

characteristic: package

text: food


text: meat

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: UCD-CFS

text: United Kingdom

text: raw meat

text: meat (raw):FOODON_03306429

characteristic: ontological term

text: Listeria monocytogenes

text: environmental/food/other

text: food

characteristic: title


characteristic: External Id

text: meat

text: live

text: Pathogen.env

text: UCD-CFS

characteristic: collection date

text: Ireland

text: raw meat

text: meat (raw):FOODON_03306429

text: Listeria monocytogenes

text: environmental/food/other

text: food


text: fish

text: live

text: Pathogen.env

text: FDA

characteristic: fda lab id

text: USA:NY

text: vacuum packed pickled herring fish

text: fish (pickled):FOODON_03315445, herring (pickled):FOODON_03301405, vacuum-packed:FOODON_03480027

text: Listeria monocytogenes

characteristic: organism

text: environmental/food/other

text: GenomeTrakr

characteristic: project name

text: United States Food and Drug Administration|Office of Regulatory Affairs|Northeast Food and Feed Laboratory

characteristic: sequenced by

text: food

characteristic: strain


text: environmental

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: FDA

characteristic: collected by

text: USA:NY

text: sponge

characteristic: isolation source

text: Listeria monocytogenes

text: GenomeTrakr

text: environmental


characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: FDA

text: USA:NY

characteristic: geo loc name

text: sponge

text: Listeria monocytogenes

text: GenomeTrakr


text: fish

characteristic: IFSAC Category

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: FDA

text: USA:NY

text: smoked salmon

text: salmon (smoked):FOODON_03301805

characteristic: ontological term

text: Listeria monocytogenes

text: environmental/food/other

characteristic: package

text: GenomeTrakr

text: food

characteristic: source type

characteristic: title


characteristic: External Id

text: fish

text: live

text: Pathogen.env

text: FDA

characteristic: collection date

characteristic: fda lab id

text: USA:NY

text: sliced nova vacuum packed salmon

text: vacuum-packed:FOODON_03480027, sliced:FOODON_03430137, salmon food product:FOODON_00002220

text: Listeria monocytogenes

characteristic: organism

text: environmental/food/other

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: food


text: Intercellular Signalling in Cardiovascular Development & Disease, Centro Nacional de Investigaciones Cardiovasculares Carlos III (CNIC).

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

characteristic: age

text: embryo

characteristic: developmental stage

text: Mib1flox; TnT-Cre

characteristic: genotype/variation

text: Mus musculus

text: heart ventricles of E14.5 embryos

text: Heart

characteristic: tissue


characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: embryo

text: WT

text: Mus musculus

text: heart ventricles of E14.5 embryos

text: Heart


Paraneurachne_muelleri_MEL 2342251

characteristic: External Id

text: University of Missouri

text: live

text: Plant

text: MEL 2342251

characteristic: genotype

text: Neurachne muelleri

text: Leaf

text: Plant sample from Neurachne muelleri

characteristic: title


text: North Carolina State University

text: live

text: Plant

text: adult

characteristic: dev stage

text: Fothergilla latifolia

characteristic: organism

characteristic: specimen voucher

text: leave

text: Plant sample from Fothergilla latifolia


text: US Food and Drug Administration

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: FDA CFSAN

characteristic: collected by

characteristic: culture collection

text: ATCC 14547

characteristic: description

text: Germany

characteristic: geo loc name

text: 16S and MLST

characteristic: identification method

text: fish from river

characteristic: isolation source

text: Vibrio cholerae

characteristic: strain

text: Pathogen: environmental/food/other sample from Vibrio cholerae

text: type strain of Vibrio albensis

characteristic: type-material


text: US Food and Drug Administration

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: FDA CFSAN

text: LMG 4044

text: USA: MA

text: 16S and MLST

text: dead amphipod

text: Vibrio harveyi

text: Pathogen: environmental/food/other sample from Vibrio harveyi

text: type strain of Vibrio harveyi


characteristic: External Id

text: US Food and Drug Administration

text: live

text: Pathogen.env

text: FDA CFSAN

text: ATCC 17749

text: Japan

text: 16S and MLST

text: spoiled horse mackerel causing food poisoning

text: Vibrio alginolyticus

characteristic: organism

text: Pathogen: environmental/food/other sample from Vibrio alginolyticus

characteristic: title

text: type strain of Vibrio alginolyticus


text: multi-ingredient, pork

characteristic: IFSAC Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: NMSU

characteristic: collected by

characteristic: collection date

text: USA:CA

text: F00087; SEA 13b26; CFSAN036992

text: dried salami

text: food (dried):FOODON_03307539, salami:FOODON_03312067

characteristic: ontological term

text: Escherichia coli

text: environmental/food/other

characteristic: package

characteristic: serovar

text: food

characteristic: source type

text: Pathogen: environmental/food/other sample from Escherichia coli

text: stx1 and stx2

characteristic: toxin


text: cow

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: NMSU

text: isolated prior to 1997

characteristic: description

text: Bos taurus

characteristic: host

text: JF 216; SEA 13c63; CFSAN036998

text: beef intestine

characteristic: isolation source

text: beef food product:foodon_00001041, intestine:uberon_0000160

text: Escherichia coli

text: animal

characteristic: strain


characteristic: External Id

text: clinical/research, human

text: live

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

text: NMSU

text: USA:NE

characteristic: geo loc name

text: Homo sapiens

text: SEA6783; CFSAN037010

text: Escherichia coli

characteristic: organism

text: human

text: Pathogen: clinical or host-associated sample from Escherichia coli

characteristic: title


text: David J. Barton, Department of Microbiology, University of Colorado

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

characteristic: cell line

text: Uninfected

characteristic: experimental condition

text: Homo sapiens

text: Human Hepatoma


characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: Infected - 1 day post infection

text: Homo sapiens

text: Human Hepatoma


text: live

text: Generic

text: Infected - 2 days post infection

text: Homo sapiens

text: Human Hepatoma


text: live

text: Generic

text: Infected - 3 days post infection

text: Homo sapiens

text: Human Hepatoma


text: live

text: Generic

text: Infected - 4 days post infection

text: Homo sapiens

text: Human Hepatoma


text: live

text: Generic

text: Infected - 5 days post infection

text: Homo sapiens

text: Human Hepatoma


DSM 13666

text: Fujian Academy of Agricultural Sciences

text: live

text: Microbe, viral or environmental

characteristic: collection date

characteristic: culture-collection

text: Japan

text: water samples

text: Halalkalibacterium halodurans

text: cell culture

characteristic: sample type

text: DSM 13666

text: Microbe sample from Halalkalibacterium halodurans

text: type strain of Bacillus okuhidensis

characteristic: type material


characteristic: External Id

text: live

characteristic: Isolate name alias

text: Pathogen.env

characteristic: NCBI submission model

text: FDA Contracted Laboratory

text: USA:TX

characteristic: isolate name alias

text: environmental

characteristic: isolation source

text: Salmonella enterica

characteristic: strain

text: Pathogen: environmental/food/other sample from Salmonella enterica


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

characteristic: age

text: embryo

characteristic: developmental stage

text: MFng; Tie2-Cre

characteristic: genotype/variation

text: Mus musculus

characteristic: organism

text: heart ventricles from 4 embryos

text: heart venticle

characteristic: tissue

characteristic: title


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: SRA accession

text: embryo

text: WT

text: Mus musculus

text: heart ventricles from 4 embryos

text: heart venticle


characteristic: External Id

text: live

text: Generic

characteristic: NCBI submission model

text: embryo

text: Jag1flox; Jag2flox; TnT-Cre

text: Mus musculus

text: heart ventricles from 4 embryos

text: heart venticle


text: live

text: Generic

text: embryo

text: Jag2flox; TnT-Cre

text: Mus musculus

text: heart ventricles from 4 embryos

text: heart venticle


text: Technische Universitaet Muenchen

text: live

text: Microbe, viral or environmental

text: Denmark: Statens Serum Institut, Copenhagen

characteristic: geo loc name

text: spinal fluid

characteristic: isolation source

text: Stutzerimonas stutzeri ATCC 17588 = LMG 11199

text: pure culture

characteristic: sample type

text: ATCC 17588

text: Microbe sample Pst_TS

text: type strain of Pseudomonas stutzeri

characteristic: type material


text: Technische Universitaet Muenchen

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: spinal fluid

text: pure culture

text: ATCC 17588

characteristic: strain

text: Microbe sample Pst_IS1

text: type strain of Pseudomonas stutzeri


text: Technische Universitaet Muenchen

text: live

text: Microbe, viral or environmental

text: spinal fluid

characteristic: organism

text: pure culture

text: ATCC 17588

text: Microbe sample Pst_IS3

text: type strain of Pseudomonas stutzeri


text: clinical/research| human

characteristic: IFSAC+ Category

text: live

text: Pathogen.cl

text: clinical/host-associated

text: NYSDOH

characteristic: collected by

characteristic: collection date

text: USA:NY

text: Homo sapiens

characteristic: host

text: stool

characteristic: ontological term

text: Salmonella enterica

text: enteritidis

characteristic: serovar

text: human

characteristic: source type

text: Salmonella Enteritidis Sample


Campylobacter sp. RM9328

characteristic: External Id

text: USDA, ARS, WRRC

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: SRA accession

text: USA: California

text: pig

text: feces

text: Campylobacter sp. RM9328

text: Microbe sample from Campylobacter sp. RM9328

characteristic: title


text: University of KwaZulu Natal

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.cl

characteristic: NCBI submission package

text: Lancet Laboratories

characteristic: genotype

text: South Africa: Durban

characteristic: geo loc name

text: Homo sapiens

text: 29.83432 S 30.99865 E

characteristic: lat lon

text: Originally submitted as Enterobacter cloacae subsp. cloacae but changed in January 2019 because of ANI results to Enterobacter hormaechei

text: Enterobacter hormaechei


text: Genetics, University of Georgia

text: live

text: Generic

text: NeuN-High

characteristic: nuclei subpopulation

text: Mus musculus

characteristic: organism

text: genomic DNA

text: brain

characteristic: tissue

text: NeuN-High mouse brain nuclei


text: Genetics, University of Georgia

text: live

text: Generic

text: NeuN-Low

text: Mus musculus

text: genomic DNA

text: brain

text: NeuN-Low mouse brain nuclei


text: Genetics, University of Georgia

text: live

text: Generic

text: Mus musculus

text: genomic DNA

text: brain

text: NeuN_Neg mouse brain nuclei


text: University of Georgia

text: live

text: Generic

characteristic: age

text: GFP+

characteristic: facs population

text: Mus musculus

text: Ileum

text: FVBN

characteristic: strain

text: ileum

text: Ileal glia


characteristic: External Id

text: University of Georgia

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: GFP-

text: Mus musculus

text: Ileum

text: FVBN

text: ileum

text: Non-glial ileal cells


text: University of Georgia

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: GFP+

text: Mus musculus

text: Colon

text: FVBN

text: colon

text: Colonic glia


text: University of Georgia

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: GFP-

text: Mus musculus

text: Colon

text: FVBN

text: colon

text: Non-glial colonic cells

characteristic: title


text: clinical/research, human

characteristic: IFSAC+ Category

text: Brigham & Women's Hospital

text: live

text: USA

text: Pathogen.cl

characteristic: NCBI submission package

text: Xiaomin Zhao

characteristic: collected by

characteristic: collection date

text: Serratia

characteristic: genus

text: USA:Boston

characteristic: geo loc name

text: Homo sapiens

characteristic: host

characteristic: host age

text: male

characteristic: host sex

characteristic: host subject id

characteristic: isolate

text: sputum

characteristic: isolation source

text: respiratory tract

characteristic: ontological term

text: Serratia marcescens

text: human

characteristic: source type

text: Pathogen: clinical or host-associated sample from Serratia marcescens

type: AMR curated data - CABBAGE

value: amoxicillin-clavulanic acid

value: CLSI

value: broth dilution

value: mg/L

value: Vitek

value: resistant

value: Serratia marcescens

value: ciprofloxacin

value: intermediate

value: ertapenem

value: levofloxacin

value: ceftazidime

value: susceptible

value: ceftriaxone

value: cefoxitin

value: amikacin

value: tobramycin


IBT PQ6

characteristic: External Id

text: Institute of Biotechnology (IBT), Vietnam Academy of Science and Technology (VAST)

characteristic: INSDC center name

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.eu

characteristic: NCBI submission model

text: MIGS/MIMS/MIMARKS.plant-associated

characteristic: SRA accession

text: Schizochytrium mangrovei PQ6 sequence data

characteristic: description

text: Aurantiochytrium mangrovei

characteristic: organism

text: PQ6 NGS sequence data


text: Harvard University

characteristic: INSDC first public

text: live

text: Viral

characteristic: NCBI submission package

characteristic: collection date

text: Synthetic M13 bacteriophage carrying E. coli beta-galactosidase gene (driven by the E. coli lap promoter) downstream of gene III

text: USA: Cambridge

characteristic: geo loc name

text: Escherichia coli

characteristic: host

text: Synthetic construct

text: Inovirus M13

text: Synthetic

characteristic: strain

text: Synthetic virus derived from Enterobacteria phage M13

characteristic: title


text: Harvard University

text: live

text: Viral

text: No MP - sample 1 - read 1

text: USA: Cambridge

text: Escherichia coli

characteristic: isolate

text: Synthetic construct

characteristic: isolation source

characteristic: lab host

text: Inovirus M13

text: Viral sample from Inovirus M13


characteristic: External Id

text: Harvard University

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Viral

text: No MP - sample 1 - read 2

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

characteristic: INSDC status

text: Viral

characteristic: NCBI submission model

text: No MP - sample 2 - read 1

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

text: No MP - sample 2 - read 2

characteristic: description

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

text: No MP - sample 3 - read 1

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

characteristic: organism

text: Viral sample from Inovirus M13


text: Harvard University

characteristic: INSDC first public

text: live

text: Viral

text: No MP - sample 3 - read 2

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

characteristic: NCBI submission package

text: MP1 - sample 1 - read 1

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

characteristic: collection date

text: MP1 - sample 1 - read 2

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

text: MP1 - sample 2 - read 1

text: USA: Cambridge

characteristic: geo loc name

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

text: MP1 - sample 2 - read 2

text: USA: Cambridge

text: Escherichia coli

characteristic: host

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

text: MP1 - sample 3 - read 1

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

text: MP1 - sample 3 - read 2

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

text: MP4 - sample 1 - read 1

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

text: MP4 - sample 1 - read 2

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

text: MP4 - sample 2 - read 1

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

text: MP4 - sample 2 - read 2

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

text: MP4 - sample 3 - read 1

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

text: MP4 - sample 3 - read 2

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

text: MP6 - sample 1 - read 1

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

text: MP6 - sample 1 - read 2

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

text: MP6 - sample 2 - read 1

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

text: MP6 - sample 2 - read 2

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

text: MP6 - sample 3 - read 1

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

text: MP6 - sample 3 - read 2

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

text: XL1-Red - sample 1 - read 1

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

text: XL1-Red - sample 1 - read 2

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

text: XL1-Red - sample 2 - read 1

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

text: XL1-Red - sample 2 - read 2

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

text: XL1-Red - sample 3 - read 1

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

text: XL1-Red - sample 3 - read 2

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

characteristic: INSDC secondary accession

text: live

text: Viral

characteristic: SRA accession

text: No MP - sample 1 - read 1

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

text: No MP - sample 1 - read 2

text: USA: Cambridge

text: Escherichia coli

characteristic: isolate

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13

characteristic: title


text: Harvard University

text: live

text: Viral

text: No MP - sample 2 - read 1

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

characteristic: isolation source

characteristic: lab host

text: Inovirus M13

text: Viral sample from Inovirus M13


characteristic: External Id

text: Harvard University

characteristic: INSDC center name

text: live

text: Viral

text: No MP - sample 2 - read 2

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Viral

text: No MP - sample 3 - read 1

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

characteristic: NCBI submission model

text: No MP - sample 3 - read 2

characteristic: description

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

characteristic: INSDC first public

text: live

text: Viral

text: MP1 - sample 1 - read 1

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

characteristic: organism

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

characteristic: NCBI submission package

characteristic: collection date

text: MP1 - sample 1 - read 2

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

text: MP1 - sample 2 - read 1

text: USA: Cambridge

characteristic: geo loc name

text: Escherichia coli

characteristic: host

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

characteristic: INSDC secondary accession

text: live

text: Viral

characteristic: SRA accession

text: MP1 - sample 2 - read 2

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

text: MP1 - sample 3 - read 1

text: USA: Cambridge

text: Escherichia coli

characteristic: isolate

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13

characteristic: title


text: Harvard University

text: live

text: Viral

text: MP1 - sample 3 - read 2

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

characteristic: isolation source

characteristic: lab host

text: Inovirus M13

text: Viral sample from Inovirus M13


characteristic: External Id

text: Harvard University

characteristic: INSDC center name

text: live

text: Viral

text: MP4 - sample 1 - read 1

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Viral

text: MP4 - sample 1 - read 2

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

characteristic: NCBI submission model

text: MP4 - sample 2 - read 1

characteristic: description

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

characteristic: INSDC first public

text: live

text: Viral

text: MP4 - sample 2 - read 2

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

characteristic: organism

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

characteristic: NCBI submission package

characteristic: collection date

text: MP4 - sample 3 - read 1

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

text: MP4 - sample 3 - read 2

text: USA: Cambridge

characteristic: geo loc name

text: Escherichia coli

characteristic: host

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

characteristic: INSDC secondary accession

text: live

text: Viral

characteristic: SRA accession

text: MP6 - sample 1 - read 1

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

text: MP6 - sample 1 - read 2

text: USA: Cambridge

text: Escherichia coli

characteristic: isolate

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13

characteristic: title


text: Harvard University

text: live

text: Viral

text: MP6 - sample 2 - read 1

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

characteristic: isolation source

characteristic: lab host

text: Inovirus M13

text: Viral sample from Inovirus M13


characteristic: External Id

text: Harvard University

characteristic: INSDC center name

text: live

text: Viral

text: MP6 - sample 2 - read 2

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Viral

text: MP6 - sample 3 - read 1

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

characteristic: NCBI submission model

text: MP6 - sample 3 - read 2

characteristic: description

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

characteristic: INSDC first public

text: live

text: Viral

text: XL1-Red - sample 1 - read 1

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

characteristic: organism

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

characteristic: NCBI submission package

characteristic: collection date

text: XL1-Red - sample 1 - read 2

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

text: XL1-Red - sample 2 - read 1

text: USA: Cambridge

characteristic: geo loc name

text: Escherichia coli

characteristic: host

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

characteristic: INSDC secondary accession

text: live

text: Viral

characteristic: SRA accession

text: XL1-Red - sample 2 - read 2

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13


text: Harvard University

text: live

text: Viral

text: XL1-Red - sample 3 - read 1

text: USA: Cambridge

text: Escherichia coli

characteristic: isolate

text: Synthetic construct

text: Inovirus M13

text: Viral sample from Inovirus M13

characteristic: title


text: Harvard University

text: live

text: Viral

text: XL1-Red - sample 3 - read 2

text: USA: Cambridge

text: Escherichia coli

text: Synthetic construct

characteristic: isolation source

characteristic: lab host

text: Inovirus M13

text: Viral sample from Inovirus M13


characteristic: External Id

text: Institute for Stem Cell and Regenerative Medicine

characteristic: INSDC center name

text: live

text: Generic

text: H1 embryonic stem cell

characteristic: cell type

text: Homo sapiens

text: naïve

characteristic: pluripotency state

text: embryonic stem cell

text: H1 4iLIF rep1


characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: H1 embryonic stem cell

text: Homo sapiens

text: naïve

text: embryonic stem cell

text: H1 4iLIF rep2


text: USDA/ARS/Eastern Regional Research Center

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: USA: Pennsylvania

text: stool

text: Escherichia coli O157:H7

characteristic: organism

text: bacteria

characteristic: sample type

characteristic: strain

text: Microbe sample from Escherichia coli O157:H7


text: UMC Utrecht

characteristic: INSDC secondary accession

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIGS.ba

characteristic: SRA accession

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: bodily fluid

characteristic: env biome

text: hospital

characteristic: env feature

text: organic material

text: Netherlands: Utrecht Hospital

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: 52.0833 N 5.1167 E

characteristic: lat lon

text: Enterococcus faecium

text: MIGS Cultured Bacterial/Archaeal sample from Enterococcus faecium


Isolate Betaproteobacterium LF4-65

characteristic: External Id

text: University of Innsbruck

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: 0 m

characteristic: altitude

text: Gabriel Zwart

characteristic: collected by

text: Analysis of freshwater betaproteobacterium genome

text: freshwater, pelagic zone

text: Netherlands: Lake Loosdrecht

text: freshwater

characteristic: isolation source

text: Zwartia hollandica

text: freshwater

text: Microbe sample from Zwartia hollandica

characteristic: title

text: type strain of Zwartia hollandica

characteristic: type-material


Beta proteobacterium MWH-UniP1

text: University of Innsbruck

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Isolate Beta proteobacterium MWH-UniP1

text: Tanzania: Dar es Salaam

text: freshwater from a pond

text: beta proteobacterium MWH-UniP1

characteristic: organism

text: freshwater from a pond

characteristic: sample type

characteristic: strain

text: Microbe sample from beta proteobacterium MWH-UniP1


Polynucleobacter sp. MWH-Mekk-C3

text: University of Innsbruck

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: Finland: Lake Mekkojarvi

characteristic: geo loc name

text: freshwater

text: Polynucleobacter sp. MWH-Mekk-C3

characteristic: material

text: Polynucleobacter paludilacus

text: isolate

text: Polynucleobacter sp. MWH-Mekk-C3

text: type strain of Polynucleobacter paludilacus


Polynucleobacter sp. UK-Pondora-W15

characteristic: External Id

text: University of Innsbruck

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: Finland

text: freshwater

text: Polynucleobacter sp. UK-Pondora-W15

text: Polynucleobacter alcilacus

text: isolate

text: Polynucleobacter sp. UK-Pondora-W15

text: type strain of Polynucleobacter alcilacus


Polynucleobacter sp. es-MAR-2

text: University of Innsbruck

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Spain: Marquesado

text: freshwater

text: Polynucleobacter sp. es-MAR-2

text: Polynucleobacter ibericus

text: isolate

text: Polynucleobacter sp. es-MAR-2

text: type strain of Polynucleobacter ibericus


Polynucleobacter sp. MWH-Mekk-B1

text: University of Innsbruck

text: live

text: Microbe, viral or environmental

text: Finland: Lake Mekkojarvi

text: freshwater

text: Polynucleobacter sp. MWH-Mekk-B1

text: Polynucleobacter finlandensis

text: isolate

text: Polynucleobacter sp. MWH-Mekk-B1

text: type strain of Polynucleobacter finlandensis


text: turkey

characteristic: IFSAC Category

text: FDA

text: live

text: Pathogen.env

text: environmental/food/other

characteristic: collected by

text: USA:DC

text: ground turkey

text: turkey (ground or minced):FOODON_00002714

characteristic: ontological term

text: Achromobacter marplatensis

text: environmental/food/other

characteristic: package

characteristic: pfge primary enzyme pattern

text: food

characteristic: source type

text: Pathogen: environmental/food/other sample from Achromobacter marplatensis


text: clinical/research, human

characteristic: IFSAC+ Category

text: Brigham & Women's Hospital

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: USA

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: SRA accession

text: Xiaomin Zhao

text: Escherichia

characteristic: genus

text: USA:Boston

text: Homo sapiens

characteristic: host

characteristic: host age

text: male

characteristic: host sex

characteristic: host subject id

characteristic: isolate

text: urine

characteristic: isolation source

text: urinary tract

text: Escherichia coli

text: human

text: Pathogen: clinical or host-associated sample from Escherichia coli

characteristic: title

value: trimethoprim-sulfamethoxazole

value: Escherichia coli

value: amoxicillin-clavulanic acid

value: cefepime

value: nitrofurantoin

value: gentamicin

value: tetracycline


characteristic: External Id

text: Madhani Lab, Biochemistry & Biophysics, UCSF

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission package

characteristic: cell density

text: Cryptococcus neoformans

characteristic: organism

text: Yeast

text: CM18(wild-type) with Gat201-CBP-FLAG

characteristic: strain

text: Gat201-FLAG ChIP-Seq Replicate 1


characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Cryptococcus neoformans

text: Yeast

text: CM18(wild-type) with Gat201-CBP-FLAG

text: Gat201-FLAG ChIP-Seq Replicate 2


text: live

text: Generic

characteristic: SRA accession

text: Cryptococcus neoformans

text: Yeast

text: CM18(wild-type) with Gat201-CBP-FLAG

text: Gat201-FLAG ChIP-Seq Replicate 3


text: live

text: Generic

text: Cryptococcus neoformans

text: Yeast

text: CM18(wild-type) with Gat204-CBP-FLAG

text: Gat204-FLAG ChIP-Seq Replicate 1


text: live

text: Generic

text: Cryptococcus neoformans

text: Yeast

text: CM18(wild-type) with Gat204-CBP-FLAG

text: Gat204-FLAG ChIP-Seq Replicate 2


text: live

text: Generic

text: Cryptococcus neoformans

text: Yeast

text: CM18(wild-type) with Gat204-CBP-FLAG

text: Gat204-FLAG ChIP-Seq Replicate 3


text: live

text: Generic

text: Cryptococcus neoformans

text: Yeast

text: CM18(wild-type) with Liv3-CBP-FLAG

text: Liv3-FLAG ChIP-Seq Replicate 1


text: live

text: Generic

text: Cryptococcus neoformans

text: Yeast

text: CM18(wild-type) with Liv3-CBP-FLAG

text: Liv3-FLAG ChIP-Seq Replicate 2


text: live

text: Generic

text: Cryptococcus neoformans

text: Yeast

text: CM18(wild-type) with Liv3-CBP-FLAG

text: Liv3-FLAG ChIP-Seq Replicate 3


text: live

text: Generic

text: Cryptococcus neoformans

text: Yeast

text: Input ChIP-Seq Replicate 1


text: live

text: Generic

text: Cryptococcus neoformans

text: Yeast

text: Input ChIP-Seq Replicate 2


text: live

text: Generic

text: Cryptococcus neoformans

text: Yeast

text: Input ChIP-Seq Replicate 3


text: live

text: Generic

text: Cryptococcus neoformans

text: Yeast

text: Input ChIP-Seq Replicate 4


text: live

text: Generic

text: Cryptococcus neoformans

text: Yeast

text: CM18 WT RNA-Seq replicate 1


text: live

text: Generic

text: Cryptococcus neoformans

text: Yeast

text: CM18 WT RNA-Seq replicate 2


text: live

text: Generic

text: Cryptococcus neoformans

text: Yeast

text: CM18(wild-type) with gat201(del)

text: gat201∆ RNA-Seq replicate 1


text: live

text: Generic

text: Cryptococcus neoformans

text: Yeast

text: CM18(wild-type) with gat201(del)

text: gat201∆ RNA-Seq replicate 2


text: live

text: Generic

text: Cryptococcus neoformans

text: Yeast

text: CM18(wild-type) with gat204(del)

text: gat204∆ RNA-Seq replicate 1


text: live

text: Generic

text: Cryptococcus neoformans

text: Yeast

text: CM18(wild-type) with gat204(del)

text: gat204∆ RNA-Seq replicate 2


text: live

text: Generic

text: Cryptococcus neoformans

text: Yeast

text: CM18(wild-type) with liv3(del)

text: liv3∆ RNA-Seq replicate 1


text: live

text: Generic

text: Cryptococcus neoformans

text: Yeast

text: CM18(wild-type) with liv3(del)

text: liv3∆ RNA-Seq replicate 2


text: live

text: Generic

text: Cryptococcus neoformans

text: Yeast

text: Kn99alpha WT RNA-Seq replicate 1


text: live

text: Generic

text: Cryptococcus neoformans

text: Yeast

text: Kn99alpha WT RNA-Seq replicate 2


text: nuts

characteristic: IFSAC Category

text: FDA

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA

characteristic: collected by

characteristic: collection date

text: USA:TX

characteristic: geo loc name

text: raw macadamia nut

text: macadamia nut (whole, raw):FOODON_03306521

characteristic: ontological term

text: Salmonella enterica

text: environmental/food/other

characteristic: package

text: food

characteristic: source type

text: Pathogen: environmental/food/other sample from Salmonella enterica


characteristic: External Id

text: clinical/research| human

characteristic: IFSAC+ Category

text: FDA

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Pathogen.cl

text: clinical/host-associated

text: FLUFL

text: USA:FL

text: Homo sapiens

characteristic: host

characteristic: host age

text: homo sapiens

characteristic: host type

text: PNUSAS000791; CFSAN037837

text: stool

characteristic: isolation source

text: Salmonella enterica

text: Serotype pending

characteristic: serovar

text: human

text: Pathogen: clinical or host-associated sample from Salmonella enterica

characteristic: title


text: clinical/research| human

text: FDA

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: clinical/host-associated

text: FLUFL

text: USA:FL

text: Homo sapiens

text: homo sapiens

text: PNUSAS000793; CFSAN037843

text: stool

text: Salmonella enterica

characteristic: organism

text: Serotype pending

text: human

characteristic: strain


characteristic: External Id

text: seeded vegetables (vine-grown)

characteristic: IFSAC Category

text: FDA

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA CFSAN CPK1 - Bell

characteristic: collected by

characteristic: collection date

text: USA:MD

characteristic: geo loc name

text: cucumber

text: cucumber (whole, raw):FOODON_03301545

characteristic: ontological term

text: Salmonella enterica

text: environmental/food/other

characteristic: package

text: GenomeTrakr

characteristic: project name

text: FDA Center for Food Safety and Applied Nutrition

characteristic: sequenced by

text: food

characteristic: source type


text: clinical/research| human

characteristic: IFSAC+ Category

text: FDA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

text: clinical/host-associated

text: FLUFL

text: USA:FL

text: Homo sapiens

characteristic: host

characteristic: host age

text: homo sapiens

characteristic: host type

text: PNUSAS000789; CFSAN037846

text: stool

characteristic: isolation source

text: Salmonella enterica

text: human

characteristic: title