text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

text: Petersham, Massachusetts, USA

text: 42.531427 N 72.189946 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF216


status: PUBLIC

characteristic: External Id

tag: Namespace:DOE Joint Genome Institute

text: Environmental | Terrestrial | Soil | Temperate forest | Unclassified

tag: attribute

characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission package

characteristic: SRA accession

text: USA:Harvard Forest LTER, Petersham, MA, USA

characteristic: geo loc name

text: Petersham, Massachusetts, USA

characteristic: isolation source

text: 42.531427 N 72.189946 W

characteristic: lat lon

text: soil metagenome

characteristic: organism

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF228

characteristic: title


text: Host-associated | Plants | Roots | Rhizosphere | Soil

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: collection date

text: USA:East Lansing, MI

text: Zhou et al. (1996), Applied and Environmental Microbiology, 62:316-322.

text: 42.794771 N 84.393804 W

text: rhizosphere metagenome

text: Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3


text: Environmental | Aquatic | Marine | Oceanic | Sediment

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Santa Barbara Basin

text: Santa Barbara Basin

text: 34.21 N 119.5 W

text: marine sediment metagenome

text: Marine sediment archaeal communities from Santa Barbara Basin, CA, that are methane-oxidizing, sample 15-18 cm


text: Environmental | Terrestrial | Soil | Unclassified | Permafrost

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Bonanza creek, Alaska, USA

text: Bonanza creek, Alaska, USA

text: 64.7 N 148.3 W

text: soil metagenome

text: Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A1


text: Environmental | Aquatic | Marine | Oceanic | Photic zone

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:surface water at the Hawaiian Ocean Time-Series

text: Hawaiian Ocean Time-Series, Pacific Ocean

text: 22.8 N 158 W

text: marine metagenome

text: Surface marine microbial communities from the Hawaiian Ocean Time-Series (HOT) - PCc_HOT186_110m Cell-Fraction Metagenomics


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: 22.8 N 158 W

text: marine metagenome

text: Surface marine microbial communities from the Hawaiian Ocean Time-Series (HOT) - HOT Ede_H179_25pcc1Fos


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: 22.8 N 158 W

text: marine metagenome

text: Surface marine microbial communities from the Hawaiian Ocean Time-Series (HOT) - Edv_HOT186_25m_pCC1Fos


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: 22.8 N 158 W

text: marine metagenome

text: Surface marine microbial communities from the Hawaiian Ocean Time-Series (HOT) - Edc_HOT186_75m_pUC18


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Santa Barbara Basin

text: Santa Barbara Basin

text: 34.21 N 119.5 W

text: marine sediment metagenome

text: Marine sediment archaeal communities from Santa Barbara Basin, CA, that are methane-oxidizing, sample 3-6 cm


text: Environmental | Terrestrial | Soil | Contaminated | Uranium contaminated

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Bioremediation Site, Rifle Colorado

text: Bioremediation Site, Rifle Colorado

text: 39.534 N 107.782 W

text: soil metagenome

text: Soil microbial communities from Uranium Bioremediation Site in Rifle, Colorado - Geobacter D07-1


text: Environmental | Terrestrial | Soil | Temperate forest | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Harvard Forest LTER, Petersham, MA, USA

text: Petersham, Massachusetts, USA

text: 42.531427 N 72.189946 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF242


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Harvard Forest LTER, Petersham, MA, USA

text: 42.532967 N 72.209488 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF003


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Barre woods, Petersham, MA, USA

text: 42.471116 N 72.17263 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF022


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Barre woods, Petersham, MA, USA

text: 42.471116 N 72.17263 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF024


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Barre woods, Petersham, MA, USA

text: 42.471116 N 72.17263 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF031


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Prospect hill, Petersham, MA, USA

text: 42.550409 N 72.180244 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF033


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Prospect hill, Petersham, MA, USA

text: 42.550409 N 72.180244 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF035


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Prospect hill, Petersham, MA, USA

text: 42.550409 N 72.180244 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Bioremediation Site, Rifle Colorado

text: Bioremediation Site, Rifle Colorado

text: 39.534 N 107.782 W

text: soil metagenome

text: Soil microbial communities from Uranium Bioremediation Site in Rifle, Colorado - Geobacter DLES3


text: Engineered | Bioremediation | Terephthalate | Wastewater | Bioreactor

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Singapore:National University of Singapore, Singapore

text: 1.29973 N 103.771791 E

text: wastewater metagenome

text: Wastewater bioreactor microbial communities from Singapore, that are terephalate degrading - sample WLES1


text: Host-associated | Birds | Digestive system | Esophagus | Crop

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Puerto Rico:Cojedes, Venezuela

text: Opisthocomus hoazin

characteristic: host

text: Cojedes, Venezuela

text: 8.956944 N 68.299167 W

text: gut metagenome

text: Hoatzin crop microbial communities from Cojedes, Venezuela - Epithelial fraction 14


text: Environmental | Terrestrial | Soil | Unclassified | Permafrost

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

text: USA:Bonanza creek, Alaska, USA

text: Bonanza creek, Alaska, USA

text: 64.7 N 148.3 W

text: soil metagenome

text: Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2


characteristic: External Id

text: Environmental | Terrestrial | Nest | Insects nest | Fungus garden/Fungus gallery

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:University of Wisconsin-Madison, USA

text: Insects

text: University of Wisconsin-Madison, USA

text: 43.076568 N 89.41259 W

text: insect metagenome

text: Insect microbial communities from the University of Wisconsin-Madison, USA, from fungus growing garden - Ambrosia Beetle


text: Host-associated | Plants | Roots | Rhizosphere | Unclassified

characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:University of North Carolina

text: Arabidopsis thaliana

text: Arabidopsis rhizosphere from growth chamber and greenhouse at University of North Carolina, USA

text: 35.9 N 79.05 W

text: rhizosphere metagenome

text: Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5


text: Environmental | Terrestrial | Soil | Unclassified | Tropical rainforest

text: DOE Joint Genome Institute

characteristic: INSDC center name

text: live

text: Metagenome or environmental

text: USA:Luquillo LTER tropical forest, Puerto Rico

text: 18.3724 N 65.7166 W

text: soil metagenome

text: Soil microbial communities from Puerto Rico rain forest, that decompose switchgrass - Feedstock-adapted consortia SG + Fe


text: Environmental | Aquatic | Thermal springs | Hot (42-90C) | Sediment

text: DOE Joint Genome Institute

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: USA:Great Boiling Spring, Nevada

text: Great Boiling Spring, Nevada

text: 40.71458 N 119.369659 W

text: hot springs metagenome

text: Hot spring sediment microbial communities from Great Boiling Spring, Nevada - cellulolytic enrichment CS 77C


text: Environmental | Terrestrial | Soil | Temperate forest | Unclassified

text: DOE Joint Genome Institute

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: USA:Harvard Forest LTER, Petersham, MA, USA

text: Prospect hill, Petersham, MA, USA

text: 42.550409 N 72.180244 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF041


text: DOE Joint Genome Institute

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: USA:Great Boiling Spring, Nevada

text: Great Boiling Spring, Nevada

text: 40.67 N 119.37 W

text: hot springs metagenome

text: Hot spring sediment microbial communities from Great Boiling Spring, Nevada - Cellulolytic enrichment CS 85C


text: Environmental | Aquatic | Thermal springs | Hot (42-90C) | Unclassified

text: DOE Joint Genome Institute

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: USA:Norris Geyser Basin, Yellowstone National Park

text: Qbiogene Bio101 Kit

text: 44.733 N 110.708917 W

text: hot springs metagenome

text: Hot spring microbial communities from Beowulf Spring, Yellowstone National Park, Wyoming, USA - YNP_Beowulf Spring_E


text: Environmental | Terrestrial | Soil | Sand | Desert

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: USA:Moab, Utah

text: MoBio Ultraclean Mega Soil DNA Extraction Kit, RNase treatment with CI/alcohol ppn

text: 38.714972 N 109.692944 W

text: soil metagenome

text: Soil microbial communities from Colorado Plateau, Greene Butte sample - Dark Crust, Colorado Plateau, Green Butte


text: Environmental | Terrestrial | Soil | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Wisconsin Rhinelander (WIR)

text: MP biomedicals FASTDNA Spin Kit for Soils

text: 45.68 N 89.63 W

text: soil metagenome

text: Soil microbial communities from sample at FACE Site Metagenome WIR_Oz2


text: Environmental | Aquatic | Marine | Oceanic | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Atlantic Ocean

text: MO-BIO Power Plant DNA Isolation Kit

text: 25.5 N 67.3 W

text: marine metagenome

text: Marine Trichodesmium cyanobacterial communities from the Bermuda Atlantic Time-Series


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Pacific Ocean:USA, Maryland, Natonal Institute of Health

text: Line P, North Pacific Ocean

text: 39.0042816 N 77.1012173 W

text: marine metagenome

text: Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_S_07_SB2_10


text: Environmental | Terrestrial | Soil | Unclassified | Grasslands

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: USA: Maryland, Natonal Institute of Health

text: Iowa, USA

text: 39.0042816 N 77.1012173 W

text: soil metagenome

text: Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: geo loc name

text: Iowa, USA

text: 39.0042816 N 77.1012173 W

text: soil metagenome

text: Soil microbial communities from Great Prairies - Iowa, Native Prairie soil


text: Environmental | Aquatic | Marine | Hydrothermal vents | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Middle Valley Ridge, Pacific Ocean

characteristic: isolation source

text: 39.0042816 N 77.1012173 W

text: marine metagenome

text: Marine hydrothermal vent microbial communities from Middle Valley Basin, Pacific Ocean - sample 1


text: Environmental | Terrestrial | Soil | Loam | Grasslands

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Kanza Prairie, Kansas, USA

text: 39.0042816 N 77.1012173 W

characteristic: lat lon

text: soil metagenome

text: Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA F1.4 TB amended with BrdU and acetate no abondance


text: Environmental | Terrestrial | Soil | Temperate forest | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Harvard Forest LTER, Petersham, MA, USA

text: Prospect hill, Petersham, MA, USA

text: 42.550409 N 72.180244 W

text: soil metagenome

characteristic: organism

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Pacific Ocean:East Pacific Rise, Pacific Ocean

text: East Pacific Rise, Pacific Ocean

text: 24.62 S 174.8 W

text: marine metagenome

text: Marine hydrothermal vent microbial communities from the East Pacific Rise, Pacific Ocean - sample 1

characteristic: title


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: East Pacific Rise, Pacific Ocean

text: 24.62 S 174.8 W

text: marine metagenome

text: Marine hydrothermal vent microbial communities from the East Pacific Rise, Pacific Ocean - sample 2


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Pacific Ocean:Guaymas Basin, Pacific Ocean

text: Guaymas Basin, Pacific Ocean

text: 27.34 N 111.4 W

text: marine metagenome

text: Marine hydrothermal vent microbial communities from Guaymas Basin, Pacific Ocean - sample 1


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Guaymas Basin, Pacific Ocean

text: 27.34 N 111.4 W

text: marine metagenome

text: Marine hydrothermal vent microbial communities from Guaymas Basin, Pacific Ocean - sample 3


text: Host-associated | Arthropoda: Insects | Digestive system | Hindgut | Fecal

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: collection date

text: Costa Rica:Quebrada Gonzales Sector, Braulio Carrillo National Park, Costa Rica

text: Veturius sinuatocollis

text: 10.207151 N 84.007673 W

text: gut metagenome

text: Passalidae beetle gut microbial communities from Costa Rica - Gallery material (4MSU+4BSU+3MSU+3BSU)


text: Host-associated | Arthropoda: Insects | Larva | Gut | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Veturius sinuatocollis (neotropical beetle)

characteristic: host

text: Quebrada Gonzales Sector, Braulio Carrillo National Park, Costa Rica

text: 10.207151 N 84.007673 W

text: gut metagenome

text: Passalidae beetle gut microbial communities from Costa Rica -Larvae (1ML+1BSL)


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

text: 10.207151 N 84.007673 W

text: gut metagenome

text: Passalidae beetle gut microbial communities from Costa Rica -Larvae (3ML+3BL)


characteristic: External Id

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: 10.207151 N 84.007673 W

text: gut metagenome

text: Passalidae beetle gut microbial communities from Costa Rica -Larvae (5ML+5BL)


text: Host-associated | Mammals | Digestive system | Stomach | Rumen

characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Urbana, Illinois, USA

text: Bos taurus

text: Urbana, Illinois, USA

text: 40.04 N 88.28 W

text: bovine metagenome

text: Bovine rumen fluid microbial communities from Urbana, Illinois, USA (cowA)


text: Environmental | Aquatic | Freshwater | Groundwater | Mine drainage

text: DOE Joint Genome Institute

characteristic: INSDC center name

text: live

text: Metagenome or environmental

text: USA:Richmond mine, Iron Mountain, California, USA

text: 40.678099 N 122.515068 W

text: mine drainage metagenome

text: Acid Mine Drainage (ARMAN) microbial communities from Richmond mine, Iron Mountain, CA, USA - AMD Site 2


text: DOE Joint Genome Institute

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: USA:Worcester, Massachusetts, USA

text: Anoplophora glabripennis

text: Worcester, Massachusetts, USA

text: 42.28 N 71.78 W

text: activated sludge metagenome

text: Anoplophora glabripennis gut microbial communities from Worchester, Massachusetts, USA - Larvae


text: Environmental | Aquatic | Thermal springs | Hot (42-90C) | Unclassified

text: DOE Joint Genome Institute

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: USA:One Hundred Springs Plain, Yellowstone National Park

text: OSP Spring in Norris Geyser Basin of Yellowstone National Park. Sample OSP_B from hydrous ferric iron mat at 72 C, pH 3.63

text: 44.7315 N 110.711389 W

text: hot springs metagenome

text: Hot spring microbial communities from One Hundred Springs Plain, Yellowstone National Park, Wyoming, USA - sample OSP_B


text: Host-associated | Arthropoda: Insects | Whole body | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:University of Wisconsin-Madison, USA

text: Insects

text: University of Wisconsin-Madison, USA

text: 43.076568 N 89.41259 W

text: insect metagenome

text: Insect microbial communities from the University of Wisconsin-Madison, USA, from fungus growing garden - Mountain Pine Beetle


text: Environmental | Terrestrial | Nest | Insects nest | Fungus garden/Fungus gallery

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Insects

text: University of Wisconsin-Madison, USA

text: 43.076568 N 89.41259 W

text: insect metagenome

text: Insect microbial communities from the University of Wisconsin-Madison, USA, from fungus growing garden - MPB lodgepole


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Insects

text: University of Wisconsin-Madison, USA

text: 43.076568 N 89.41259 W

text: insect metagenome

text: Insect microbial communities from the University of Wisconsin-Madison, USA, from fungus growing garden - Termite Workers


text: Engineered | Solid waste | Grass | Composting | Bioreactor

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:University of California, Davis, USA

text: University of California, Davis, USA

text: 38.796568 N 121.881912 W

text: compost metagenome

text: Green-waste compost microbial community at University of California, Davis, USA, from solid state bioreactor - Inoculum 16S MiniPCR


text: Environmental | Terrestrial | Soil | Unclassified | Grasslands

text: DOE Joint Genome Institute

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: USA:Kansas, USA

text: Kansas, USA

text: 39.214012 N 96.585283 W

text: soil metagenome

text: Soil microbial communities from Great Prairies - Kansas, Native Prairie soil


text: DOE Joint Genome Institute

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: USA:Wisconsin, USA

text: Wisconsin, USA

text: 43.303611 N 89.332778 W

text: soil metagenome

text: Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil


text: Environmental | Aquatic | Thermal springs | Hot (42-90C) | Sediment

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: USA:Great Boiling Spring, Nevada

text: Great Boiling Spring, Nevada

text: 40.65833 N 119.37772 W

text: hot springs metagenome

text: Hot spring sediment microbial communities from Great Boiling Spring, Nevada - surface sediment


text: Engineered | Wastewater | Nutrient removal | Dissolved organics (aerobic) | Activated sludge

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Switzerland:Visp, Switzerland

text: Visp, Switzerland

text: 46.30044 N 7.8594 E

text: wastewater metagenome

text: Activated sludge microbial communities from Commune de Morges, Switzerland - plasmid pool Visp-2009 (Newbler)


text: Environmental | Aquatic | Marine | Oceanic | Photic zone

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:surface water at the Hawaiian Ocean Time-Series

text: Hawaiian Ocean Time-Series, Pacific Ocean

text: 22.8 N 158 W

text: marine metagenome

text: Surface marine microbial communities from the Hawaiian Ocean Time-Series (HOT) - HOT186_25m_Pro


text: Environmental | Terrestrial | Nest | Insects nest | Fungus garden/Fungus gallery

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:University of Wisconsin-Madison, USA

text: Insects

text: University of Wisconsin-Madison, USA

text: 43.076568 N 89.41259 W

text: insect metagenome

text: Insect microbial communities from the University of Wisconsin-Madison, USA, from fungus growing garden - MPB hybrid beetle


text: Host-associated | Arthropoda: Insects | Whole body | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Insects

text: University of Wisconsin-Madison, USA

text: 43.076568 N 89.41259 W

text: insect metagenome

text: Insect microbial communities from the University of Wisconsin-Madison, USA, from fungus growing garden - Southern Pine Beetle


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Insects

text: University of Wisconsin-Madison, USA

text: 43.076568 N 89.41259 W

text: insect metagenome

text: Insect microbial communities from the University of Wisconsin-Madison, USA, from fungus growing garden - Ambrosia Beetle Adult


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Panama:Gamboa, Panama

text: Trachymyrmex

text: Gamboa, Panama

text: 9.1167 N 79.7000 W

text: fungus metagenome

text: Ant host-associated microbial communities from Gamboa, Panama - Trachymyrmex fungus garden


text: Environmental | Aquatic | Marine | Oceanic | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Russia: Amurskaya oblast

text: Amurskaya oblast, Russia

text: 48.969 N 130.667 E

text: marine metagenome

text: Marine microbial communities from the Subarctic Pacific Ocean - P12_A09_1000


text: Engineered | Biotransformation | Mixed alcohol bioreactor | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Texas A and M University College Station, Texas, USA

text: 30.620833 N 96.341111 W

text: bioreactor metagenome

text: Mixed alcohol bioreactor microbial communities from Texas A and M University - 55C, Day 16


text: Host-associated | Mammals | Digestive system | Stomach | Rumen

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:University of Illinois Dairy Farm in Urbana, IL

text: Bos taurus

text: Bovine rumen

text: 40.0886 N 88.2202 W

text: bovine metagenome

text: Bovine rumen viral communities from University of Illinois Dairy Farm in Urbana, IL, Cow rumen 7664


text: Host-associated | Plants | Roots | Rhizosphere | Soil

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: USA:Central Sands area of central Wisconsin.

text: Zhou et al. (1996), Applied and Environmental Microbiology, 62:316-322

text: 44.166906 N 89.649965 W

text: rhizosphere metagenome

text: Switchgrass rhizosphere microbial communities from Rose Lake, Michigan, USA - BV2.2


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:East Lansing, MI

characteristic: geo loc name

text: Zhou et al. (1996), Applied and Environmental Microbiology, 62:316-322.

text: 42.794771 N 84.393804 W

text: rhizosphere metagenome

text: Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2


text: Environmental | Terrestrial | Soil | Agricultural land | Bulk soil

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:East Lansing, MI

characteristic: isolation source

text: 42.794771 N 84.393804 W

text: rhizosphere metagenome

text: Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 Bulk Soil


text: Environmental | Aquatic | Marine | Oceanic | Photic zone

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:surface water at the Hawaiian Ocean Time-Series

text: Hawaiian Ocean Time-Series, Pacific Ocean

text: 22.8 N 158 W

characteristic: lat lon

text: marine metagenome

text: Surface marine microbial communities from the Hawaiian Ocean Time-Series (HOT) - fosmid profiles


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: 22.8 N 158 W

text: marine metagenome

characteristic: organism

text: Surface marine microbial communities from the Hawaiian Ocean Time-Series (HOT) - Edv_HOT186_75m Viral Fraction Metagenomics


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: 22.8 N 158 W

text: marine metagenome

text: Surface marine microbial communities from the Hawaiian Ocean Time-Series (HOT) - PCc_HOT186_25m Cell-Fraction Metagenomics

characteristic: title


text: Environmental | Aquatic | Marine | Oceanic | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: collection date

text: China: Hulunber, Nei Mongol

text: Hulunber, Nei Mongol, China

text: 49.41 N 124 E

text: marine metagenome

text: Marine microbial communities from the Subarctic Pacific Ocean - SA120


text: Environmental | Aquatic | Freshwater | Lentic | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Lake Washington, Seattle, Washington, USA

text: 47.63 N 122.27889 W

text: freshwater sediment metagenome

text: Freshwater sediment microbial communities from Lake Washington, Seattle, for methane and nitrogen Cycles - from flow sorted anaerobic plus nitrate


text: Engineered | Bioremediation | Terephthalate | Wastewater | Bioreactor

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Singapore:National University of Singapore, Singapore

text: 1.29973 N 103.771791 E

text: wastewater metagenome

text: Wastewater bioreactor microbial communities from Singapore, that are terephalate degrading - sample WLES3


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: National University of Singapore, Singapore

text: 1.29973 N 103.771791 E

text: wastewater metagenome

text: Wastewater bioreactor microbial communities from Singapore - TA Community Bioreactor Phenol - 1


text: Environmental | Aquatic | Freshwater | Lake | Epilimnion

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Trout Bog, Vilas County, Wisconsin, USA

text: Trout Bog, Vilas County, Wisconsin, USA

text: 46.041 N 89.686 W

text: freshwater metagenome

text: Freshwater microbial communities from Trout Bog Lake, WI - 17SEP2007 epilimnion


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Pacific Ocean:P20, Pacific Ocean

text: Line P, North Pacific Ocean

text: 49.34 N 138.4 W

text: marine metagenome

text: Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2009 P20 10m


text: Environmental | Terrestrial | Soil | Temperate forest | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Harvard Forest LTER, Petersham, MA, USA

text: Barre woods, Petersham, MA, USA

text: 42.471116 N 72.17263 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF125


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Petersham, Massachusetts, USA

text: 42.531427 N 72.189946 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF220


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Petersham, Massachusetts, USA

text: 42.531427 N 72.189946 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF246


text: Environmental | Aquatic | Thermal springs | Hot (42-90C) | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Nymph Lake, Yellowstone National Park, Wyoming, USA

text: 44.7523206 N 110.7253926 W

text: hot springs metagenome

text: Hot spring viral communities from Yellowstone National Park, Wyoming, USA - Archaeal Virus Community CH0801


text: Environmental | Aquatic | Freshwater | Lentic | Sediment

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Lake Washington, Seattle

text: QIAamp DNA Micro Kit /MDA

text: 47.676484 N 122.228394 W

text: freshwater sediment metagenome

text: Sediment microbial communities from Lake Washington, Seattle, for Methane and Nitrogen Cycles, sample from flow sorted anaerobic no nitrate


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Lake Washington, Seattle, Washington, USA

text: 47.07 N 122.27889 W

text: freshwater sediment metagenome

text: Freshwater sediment microbial communities from Lake Washington, Seattle, for methane and nitrogen Cycles - SIP 13C methane aerobic+nitrate


text: Environmental | Aquatic | Marine | Intertidal zone | Sediment

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Argentina:OR site, Ushuaia Bay, Tierra del Fuego, Argentina

text: 54.80407 S 68.288208 W

text: marine metagenome

text: Marine microbial communities from chronically polluted sediments in Tierra del Fuego - site OR sample ARG 06_12.3m


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Antarctica:S1 site, Potter Cove, King George Island, Antarctic Peninsula

text: 62.230512 S 58.656117 W

text: marine metagenome

text: Marine microbial communities from chronically polluted sediments in Antarctica -King George Island site S1 sample ANT 01_9.5m


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: S1 site, Potter Cove, King George Island, Antarctic Peninsula

text: 62.230512 S 58.656117 W

text: marine metagenome

text: Marine microbial communities from chronically polluted sediments in Antarctica -King George Island site S1 sample ANT 03_9.5m


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Antarctica:S2 site, Potter Cove, King George Island, Antarctic Peninsula

text: 62.231932 S 58.655087 W

text: marine metagenome

text: Marine microbial communities from chronically polluted sediments in Antarctica - King George Island site S2 sample ANT 05_23.45m


text: Environmental | Aquatic | Freshwater | Lake | Hypolimnion

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Trout Bog, Vilas County, Wisconsin, USA

text: Trout Bog, Vilas County, Wisconsin, USA

text: 46.0412 N 89.6864 W

text: freshwater metagenome

text: Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 hypolimnion


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Trout Bog, Vilas County, Wisconsin, USA

text: 46.0412 N 89.6864 W

text: freshwater metagenome

text: Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 hypolimnion


text: Environmental | Aquatic | Freshwater | Lake | Epilimnion

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Lake Mendota, Madison, WI

text: Lake Mendota, Madison, WI

text: 43.098333 N 89.405278 W

text: freshwater metagenome

text: Freshwater microbial communities from Lake Mendota, WI - Practice 15JUN2010 epilimnion


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Trout Bog, Vilas County, Wisconsin

text: freshwater lake; hypolimnion

text: 46.041 N 89.686 W

text: freshwater metagenome

text: Freshwater microbial communities from Trout Bog Lake, WI - 07JUL2009 hypolimnion


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Trout Bog, Vilas County, Wisconsin

text: freshwater lake; hypolimnion

text: 46.041 N 89.686 W

text: freshwater metagenome

text: Freshwater microbial communities from Trout Bog Lake, WI - 21JUL2009 hypolimnion


text: Host-associated | Plants | Roots | Rhizosphere | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:University of North Carolina, USA

text: Arabidopsis thaliana

characteristic: host

text: Arabidopsis rhizosphere from growth chamber and greenhouse at University of North Carolina, USA

text: 35.9 N 79.05 W

text: rhizosphere metagenome

text: Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Col-0 young rhizosphere DNA


text: Host-associated | Mollusca | Digestive system | Ceca | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

text: USA:Old Meadowdale Pier, Puget Sound, Washington, USA

text: Bankia setacea

text: 47.85072 N 122.33843 W

text: gill metagenome

text: Bankia setacea gill microbial communities from Puget Sound, Washington, USA - Caecum Enriched


characteristic: External Id

text: Environmental | Aquatic | Non-marine Saline and Alkaline | Hypersaline | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Antarctica:Lake Vida, Antarctica

text: Lake Vida, Antarctica

text: 77.38861 S 161.931111 E

text: hypersaline lake metagenome

text: Hypersaline microbial communities from Lake Vida, Antarctica - sample: Brine Hole Two 0.1-0.2 micron


text: Environmental | Aquatic | Marine | Oceanic | Unclassified

characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Pacific Ocean:P16, Pacific Ocean

text: Line P, North Pacific Ocean

text: 48.35 N 123.3 W

text: marine metagenome

text: Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2008 P16 10m


text: DOE Joint Genome Institute

characteristic: INSDC center name

text: live

text: Metagenome or environmental

text: Pacific Ocean:P26, Pacific Ocean

text: Line P, North Pacific Ocean

text: 50 N 145 W

text: marine metagenome

text: Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2009 P26 10m


text: Environmental | Aquatic | Marine | Unclassified | Unclassified

text: DOE Joint Genome Institute

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: USA:Eden Landing Ponds, San Francisco, CA, USA

text: 37.569300 N 122.102517 W

text: marine metagenome

text: Marine microbial community from Union City, CA, USA - Pond 1C Liquid 3


text: Environmental | Aquatic | Freshwater | Lake | Epilimnion

text: DOE Joint Genome Institute

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: USA:Trout Bog, Vilas County, Wisconsin

text: freshwater lake; epilimnion

text: 46.041 N 89.686 W

text: freshwater metagenome

text: Freshwater microbial communities from Trout Bog Lake, WI - 28JUN2007 epilimnion


text: DOE Joint Genome Institute

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: Eden Landing Ponds, San Francisco, CA, USA

text: 37.569017 N 122.102433 W

text: marine metagenome

text: Marine microbial community from Union City, CA, USA - Pond 2C Liquid 2


text: DOE Joint Genome Institute

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: 37.569167 N 122.101900 W

text: marine metagenome

text: Marine sediment microbial community from Union City, CA, USA - Pond 2C Sediment 1


text: Environmental | Aquatic | Freshwater | Lake | Hypolimnion

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: USA:Trout Bog, Vilas County, Wisconsin

text: freshwater lake; hypolimnion

text: 46.041 N 89.686 W

text: freshwater metagenome

text: Freshwater microbial communities from Trout Bog Lake, WI - 25AUG2008 hypolimnion


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: USA:Trout Bog, Vilas County, Wisconsin

text: freshwater lake; hypolimnion

text: 46.041 N 89.686 W

text: freshwater metagenome

text: Freshwater microbial communities from Trout Bog Lake, WI - 20SEP2008 hypolimnion


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Trout Bog, Vilas County, Wisconsin

characteristic: geo loc name

text: freshwater lake; hypolimnion

text: 46.041 N 89.686 W

text: freshwater metagenome

text: Freshwater microbial communities from Trout Bog Lake, WI - 03JUN2009 hypolimnion


text: Environmental | Terrestrial | Soil | Tropical forest | Bulk soil

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Brazil:Amazon forest, Fazenda Nova Vida, City of Ariquemes, State of Rondonia, Brazil

characteristic: isolation source

text: 10.171667 S 62.7875 W

text: soil metagenome

text: Forest soil microbial communities from Amazon forest - 2010 replicate II A100


text: Environmental | Aquatic | Marine | Intertidal zone | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Canada:Saanich Inlet, British Columbia, Canada

text: Saanich Inlet, British Columbia, Canada

text: 48.3629 N 123.2841 W

characteristic: lat lon

text: marine metagenome

text: Marine microbial communities from anoxic basin of Saanich Inlet - Saanich Inlet pooled fosmids


text: Engineered | Wastewater | Nutrient removal | Biological phosphorus removal | Bioreactor

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Madison, WI, USA

text: Madison, WI, USA

text: 43.078418 N 89.386482 W

text: wastewater metagenome

characteristic: organism

text: Wastewater treatment Type I Accumulibacter community from EBPR Bioreactor in Madison, WI - Accumulibacter clade IA genome-pooled fosmids


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Trout Bog, Vilas County, Wisconsin

text: freshwater lake; hypolimnion

text: 46.041 N 89.686 W

text: freshwater metagenome

text: Freshwater microbial communities from Trout Bog Lake, WI - 31JUL2007 hypolimnion

characteristic: title


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: collection date

text: Puerto Rico:Bioluminescent Bay, La Parguera, Puerto Rico

text: 17.967500 N 67.018833 W

text: marine metagenome

text: Marine sediment microbial community from La Parguera, Puerto Rico - PR Tt Sediment 1


text: Environmental | Aquatic | Marine | Intertidal zone | Sediment

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Norway:Adventfjord, Svalbard Archipelago, Norway, Station 1

text: 78.237209 N 15.677776 E

text: marine metagenome

text: Marine microbial communities from chronically polluted sediments in Adventfjord, Norway - Svalbard Archipelago station 1 sample NOR 05_45m


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Norway:Adventfjord, Svalbard Archipelago, Norway, station 1

text: 78.237209 N 15.677776 E

text: marine metagenome

text: Marine microbial communities from chronically polluted sediments in Adventfjord, Norway : sample - Svalbard Archipelago station 1 sample NOR 08_45m


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Norway:Adventfjord, Svalbard Archipelago, Norway, station 2

text: 78.243786 N 15.656147 E

text: marine metagenome

text: Marine microbial communities from chronically polluted sediments in Adventfjord, Norway - Svalbard Archipelago station 2 sample NOR 13_50m


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Adventfjord, Svalbard Archipelago, Norway, station 2

text: 78.243786 N 15.656147 E

text: marine metagenome

text: Marine microbial communities from chronically polluted sediments in Adventfjord, Norway - Svalbard Archipelago station 2 sample NOR 15_50m


text: Environmental | Aquatic | Freshwater | Lake | Epilimnion

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Trout Bog, Vilas County, Wisconsin

text: freshwater lake; epilimnion

text: 46.041 N 89.686 W

text: freshwater metagenome

text: Freshwater microbial communities from Trout Bog Lake, WI - 15JUL2008 epilimnion


text: Host-associated | Plants | Roots | Rhizosphere | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:University of North Carolina, USA

text: Arabidopsis rhizosphere from growth chamber and greenhouse at University of North Carolina, USA

text: 35.9 N 79.05 W

text: rhizosphere metagenome

text: Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis soil old


text: Environmental | Aquatic | Non-marine Saline and Alkaline | Hypersaline | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Elkhorn Slough, Monterey Bay, California, USA

text: 36.82188 N 121.744 W

text: hypersaline lake metagenome

text: Hot spring microbial communities from Elkhorn Slough, Monterey Bay, USA - MD6A


text: Engineered | Solid waste | Feedstock | Composting | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Newby Island compost facility, Milpitas, CA

text: Feedstock adapted compost from Newby Island compost facility, Milpitas, CA

text: 37.454581 N 121.928712 W

text: compost metagenome

text: Feedstock adapted compost microbial communities from Newby Island compost facility, Milpitas, CA, USA - Passage 4_MCC


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Trout Bog, Vilas County, Wisconsin

text: freshwater lake; epilimnion

text: 46.041 N 89.686 W

text: freshwater metagenome

text: Freshwater microbial communities from Trout Bog Lake, WI - 23OCT2008 epilimnion


text: Environmental | Aquatic | Marine | Intertidal zone | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Puerto Rico:Bioluminescent Bay, La Paraguera, Puerto Rico

text: 17.966667 N 67 W

text: marine metagenome

text: Marine microbial community from La Parguera, Puerto Rico - BB Mangrove A Liquid


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Trout Bog, Vilas County, Wisconsin

text: freshwater lake; epilimnion

text: 46.041 N 89.686 W

text: freshwater metagenome

text: Freshwater microbial communities from Trout Bog Lake, WI - 23JUN2009 epilimnion


text: Environmental | Aquatic | Freshwater | Lake | Epilimnion

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Trout Bog, Vilas County, Wisconsin

text: freshwater lake; epilimnion

text: 46.041 N 89.686 W

text: freshwater metagenome

text: Freshwater microbial communities from Trout Bog Lake, WI - 13JUL2009 epilimnion


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Trout Bog, Vilas County, Wisconsin

text: freshwater lake; epilimnion

text: 46.041 N 89.686 W

text: freshwater metagenome

text: Freshwater microbial communities from Trout Bog Lake, WI - 27JUL2009 epilimnion


text: Environmental | Aquatic | Freshwater | Lake | Hypolimnion

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Trout Bog, Vilas County, Wisconsin

text: freshwater lake; hypolimnion

text: 46.041 N 89.686 W

text: freshwater metagenome

text: Freshwater microbial communities from Trout Bog Lake, WI - 28MAY2007 hypolimnion


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Trout Bog, Vilas County, Wisconsin

text: freshwater lake; hypolimnion

text: 46.041 N 89.686 W

text: freshwater metagenome

text: Freshwater microbial communities from Trout Bog Lake, WI - 01OCT2007 hypolimnion


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Trout Bog, Vilas County, Wisconsin

text: freshwater lake; hypolimnion

text: 46.041 N 89.686 W

text: freshwater metagenome

text: Freshwater microbial communities from Trout Bog Lake, WI - 05NOV2007 hypolimnion


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Trout Bog, Vilas County, Wisconsin

text: freshwater lake; hypolimnion

text: 46.041 N 89.686 W

text: freshwater metagenome

text: Freshwater microbial communities from Trout Bog Lake, WI - 28JUL2008 hypolimnion


text: Environmental | Aquatic | Marine | Intertidal zone | Sediment

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:White Oak River Estuary, North Carolina, subseafloor sediments from , Sample 14E; 24 centimeters below seafloor

text: MoBio PowerSoil

text: 34.690251 N 77.106571 W

text: marine sediment metagenome

text: Marine subseafloor sediment microbial communities, sample from White Oak River Estuary, NC, USA 14E


text: Environmental | Aquatic | Marine | Wetlands | Sediment

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Twitchell Island in the Sacramento/San Joaquin Delta, CA

text: Mo Bio PowerLyzer PowerSoil DNA Isolation Kit

text: 38.106796 N 121.646457 W

text: wetland metagenome

text: Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site L2 Tule


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: 38.10726 N 121.648538 W

text: wetland metagenome

text: Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site B1 Cattail


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: 38.10726 N 121.648538 W

text: wetland metagenome

text: Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface Sediment Feb2011 Site B2 Cattail


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: 38.106796 N 121.646457 W

text: wetland metagenome

text: Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site L1 Cattail


text: Host-associated | Mollusca | Respiratory system | Gills | Extracellular

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Puget Sound, Washington, USA

text: Bankia setacea

characteristic: host

text: Puget Sound, Washington, USA

text: 47.957498 N 122.529373 W

text: marine metagenome

text: Microbial communities from multiple species of Shipworm: Sample from Bankia setacea gill BSg3


text: Environmental | Aquatic | Freshwater | Lake | Epilimnion

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

text: USA:Trout Bog, Vilas County, Wisconsin

text: freshwater lake; epilimnion

text: 46.041 N 89.686 W

text: freshwater metagenome

text: Freshwater microbial communities from Trout Bog Lake, WI - 05AUG2008 epilimnion


characteristic: External Id

text: Environmental | Aquatic | Freshwater | Lake | Hypolimnion

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Trout Bog, Vilas County, Wisconsin

text: freshwater lake; hypolimnion

text: 46.041 N 89.686 W

text: freshwater metagenome

text: Freshwater microbial communities from Trout Bog Lake, WI - 13JUN2007 hypolimnion


characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Trout Bog, Vilas County, Wisconsin

text: freshwater lake; hypolimnion

text: 46.041 N 89.686 W

text: freshwater metagenome

text: Freshwater microbial communities from Trout Bog Lake, WI - 02JUL2007 hypolimnion


text: DOE Joint Genome Institute

characteristic: INSDC center name

text: live

text: Metagenome or environmental

text: USA:Trout Bog, Vilas County, Wisconsin

text: freshwater lake; hypolimnion

text: 46.041 N 89.686 W

text: freshwater metagenome

text: Freshwater microbial communities from Trout Bog Lake, WI - 25JUL2007 hypolimnion


text: DOE Joint Genome Institute

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: USA:Trout Bog, Vilas County, Wisconsin

text: freshwater lake; hypolimnion

text: 46.041 N 89.686 W

text: freshwater metagenome

text: Freshwater microbial communities from Trout Bog Lake, WI - 01JUL2008 hypolimnion


text: DOE Joint Genome Institute

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: USA:Trout Bog, Vilas County, Wisconsin

text: freshwater lake; hypolimnion

text: 46.041 N 89.686 W

text: freshwater metagenome

text: Freshwater microbial communities from Trout Bog Lake, WI - 08JUL2008 hypolimnion


text: Engineered | Solid waste | Grass | Composting | Bioreactor

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:University of California, Davis, USA

text: University of California, Davis, USA

text: 38.546 N 121.7533 W

text: bioreactor metagenome

text: Thermophilic enrichment culture from UC Davis - Pyrotags


text: Environmental | Aquatic | Freshwater | Groundwater | Cave water

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Italy:Fissure Spring (below trough), Frasassi Caves, Italy

text: Targeted biofilms from Fissure Spring (below trough), Frasassi Caves, Italy

text: 43.383333 N 12.95 E

text: groundwater metagenome

text: Groundwater microbial communities from subsurface biofilms in sulfidic aquifier in Frasassi Gorge, Italy, sample from two redox zones- FS08_3


text: Host-associated | Arthropoda: Insects | Digestive system | Gut | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Costa Rica:Carara National Park, Central Pacific Conservation Area, Costa Rica, Central America

text: 9.46 N 84.36 W

text: gut metagenome

text: Passalidae beetle gut microbial communities from Costa Rica -pyrotags


text: Environmental | Aquatic | Marine | Unclassified | Unclassified

text: DOE Joint Genome Institute

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: Puerto Rico:Cabo Rojo, Puerto Rico

text: Cabo Rojo, Puerto Rico

text: 17.951083 N 67.193167 W

text: marine metagenome

text: Marine microbial community from Cabo Rojo, Puerto Rico - PR CR 10% Liquid 1


text: Environmental | Terrestrial | Soil | Temperate forest | Unclassified

text: DOE Joint Genome Institute

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: USA:Harvard Forest LTER, Petersham, MA, USA

text: Harvard Forest LTER, Petersham, MA, USA

text: 42.532967 N 72.180244 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF105


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Harvard Forest LTER, Petersham, MA, USA

text: 42.532967 N 72.180244 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF111


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: Barre woods, Petersham, MA, USA

text: 42.471116 N 72.17263 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF122


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: geo loc name

text: Barre woods, Petersham, MA, USA

text: 42.471116 N 72.17263 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF123


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Barre woods, Petersham, MA, USA

characteristic: isolation source

text: 42.471116 N 72.17263 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF128


text: Environmental | Aquatic | Marine | Oceanic | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Pacific Ocean:P12, Pacific Ocean

text: Line P, North Pacific Ocean

text: 48.97 N 130.666667 W

characteristic: lat lon

text: marine metagenome

text: Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2008 P12 10m


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Pacific Ocean:P20, Pacific Ocean

text: Line P, North Pacific Ocean

text: 49.34 N 138.4 W

text: marine metagenome

characteristic: organism

text: Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2008 P20 10m


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Pacific Ocean:P12, Pacific Ocean

text: Line P, North Pacific Ocean

text: 48.97 N 130.666667 W

text: marine metagenome

text: Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2009 P12 10m

characteristic: title


text: Environmental | Terrestrial | Soil | Tropical forest | Bulk soil

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Brazil:Amazon forest, Fazenda Nova Vida, City of Ariquemes, State of Rondonia, Brazil

text: 10.171667 S 62.7875 W

text: soil metagenome

text: Forest soil microbial communities from Amazon forest - 2010 replicate II A10


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Amazon forest, Fazenda Nova Vida, City of Ariquemes, State of Rondonia, Brazil

text: 10.171667 S 62.7875 W

text: soil metagenome

text: Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: 10.171667 S 62.7875 W

text: soil metagenome

text: Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Pacific Ocean:P16, Pacific Ocean

text: Line P, North Pacific Ocean

text: 48.35 N 123.3 W

text: marine metagenome

text: Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P16 10m


text: Environmental | Aquatic | Freshwater | Lake | Hypolimnion

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: collection date

text: USA:Trout Bog, Vilas County, Wisconsin

text: freshwater lake; hypolimnion

text: 46.041 N 89.686 W

text: freshwater metagenome

text: Freshwater microbial communities from Trout Bog Lake, WI - 23OCT2008 hypolimnion


text: Environmental | Aquatic | Non-marine Saline and Alkaline | Saline | Sediment

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Puerto Rico:Bioluminescent Bay, La Paraguera, Puerto Rico

text: 17.966667 N 67 W

text: marine sediment metagenome

text: Marine sediment microbial community from La Parguera, Puerto Rico - BB Mangrove A Sediment


text: Environmental | Terrestrial | Soil | Temperate forest | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Harvard Forest LTER, Petersham, MA, USA

text: Barre woods, Petersham, MA, USA

text: 42.471116 N 72.17263 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF130


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Barre woods, Petersham, MA, USA

text: 42.471116 N 72.17263 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF131


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Prospect hill, Petersham, MA, USA

text: 42.53312 N 72.189707 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF137


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Prospect hill, Petersham, MA, USA

text: 42.53312 N 72.189707 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF141


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Petersham, Massachusetts, USA

text: 42.531427 N 72.189946 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Petersham, Massachusetts, USA

text: 42.531427 N 72.189946 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF208


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Petersham, Massachusetts, USA

text: 42.531427 N 72.189946 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF212


text: Environmental | Aquatic | Marine | Intertidal zone | Estuary

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Argentina:Ushuaia Bay, Tierra del Fuego, Argentina

text: 54.810872 S 68.295525 W

text: marine metagenome

text: Marine microbial communities from chronically polluted sediments in Tierra del Fuego: Site OR sample ARG 05_12.3m


text: Environmental | Aquatic | Non-marine Saline and Alkaline | Saline | Epilimnion

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Greece:Etoliko Lagoon, Greece

text: Etoliko Lagoon, Greece

text: 38.4825 N 21.315 E

text: salt lake metagenome

text: Saline surface water microbial communities from Etoliko Lagoon, Greece - surface water (0 m)


text: Host-associated | Arthropoda: Insects | Digestive system | Hindgut | Paunch/P3 segment

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Florida, USA

text: Flow sorted Termite Single Cells from Nasutitermes corniger

text: 26.135 N 80.129 W

text: insect gut metagenome

text: P3 Gut Segment Termite Single Cell Genome_Treponema sp. T4b from Florida, USA


text: Environmental | Aquatic | Marine | Wetlands | Sediment

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Twitchell Island in the Sacramento/San Joaquin Delta, CA

text: Mo Bio PowerLyzer PowerSoil DNA Isolation Kit

text: 38.10726 N 121.648538 W

text: wetland metagenome

text: Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site B1 Bulk


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: 38.107057 N 121.647578 W

text: wetland metagenome

text: Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Tule


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Florida

text: Florida, USA

text: 26.135833 N 80.129444 W

text: insect gut metagenome

text: Nasutitermes corniger P3 segment gut microbial communities from Florida, USA - Single Cell Genome_Tm7 sp. T15b


text: Environmental | Aquatic | Freshwater | Lake | Epilimnion

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Trout Bog, Vilas County, Wisconsin

text: freshwater lake; epilimnion

text: 46.041 N 89.686 W

text: freshwater metagenome

text: Freshwater microbial communities from Trout Bog Lake, WI - 11AUG2009 epilimnion


text: Environmental | Aquatic | Marine | Intertidal zone | Sediment

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Puerto Rico:Bioluminescent Bay, La Paraguera, Puerto Rico

text: 17.966667 N 67 W

text: marine metagenome

text: Marine sediment microbial community from La Parguera, Puerto Rico - BB Mangrove B Sediment


text: Environmental | Terrestrial | Soil | Temperate forest | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Harvard Forest LTER, Petersham, MA, USA

text: Petersham, Massachusetts, USA

text: 42.531427 N 72.189946 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF222


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Petersham, Massachusetts, USA

text: 42.531427 N 72.189946 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238


text: Engineered | Bioremediation | Hydrocarbon | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Netherlands:Wageningen University, Wageningen, Netherlands

text: Culture enriched from anaerobic sludge reactor treating sugar beet waste

text: 51.9856 N 5.6662 E

text: hydrocarbon metagenome

text: Hydrocarbon sludge reactor syntrophic bacterial communities from University of Wageningen, Netherlands that are anaerobic - Co-culture containing Pelotomaculum schinkii HH


text: Host-associated | Arthropoda: Insects | Digestive system | Hindgut | Paunch/P3 segment

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Florida

text: Florida, USA

text: 26.135833 N 80.129444 W

text: insect gut metagenome

text: Nasutitermes corniger P3 segment gut microbial communities from Florida, USA - Single Cell Genome_Actinobacteria sp. T11a


text: Environmental | Aquatic | Non-marine Saline and Alkaline | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:One Hundred Spring Plain, Yellowstone National Park, Wyoming, USA

text: 44.7330426 N 110.7089928 W

text: microbial mat metagenome

text: Ferrous microbial mat communities from One Hundred Spring Plain, Yellowstone National Park, USA - T=74-76


text: Environmental | Aquatic | Non-marine Saline and Alkaline | Hypersaline | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Pacific Northwest National Laboratory, Washington, USA

text: 46.349179 N 119.281483 W

text: hypersaline lake metagenome

text: Heterotroph microbial communities from Hot Lake, Washington, USA - coculture lab enrichment 2


text: Environmental | Aquatic | Marine | Oceanic | Sediment

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Santa Barbara Basin, California, USA

text: Santa Barbara Basin, California, USA

text: 34.3874 N 119.71 W

text: marine sediment metagenome

text: Marine sediment archaeal communities from Santa Barbara Basin, CA, that are anaerobic and methane-oxidizing - ANME Fosmids Round 1


text: Environmental | Aquatic | Freshwater | Lentic | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: LaBonte Lake, Laramie, Wyoming

text: LaBonte Lake, Laramie, Wyoming, USA

text: 41.321078 N 105.586983 W

text: freshwater metagenome

text: Freshwater microbial communities from LaBonte Lake, Laramie, Wyoming, USA - peak-bloom 1


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Florida

text: Florida, USA

text: 26.135833 N 80.129444 W

text: insect gut metagenome

text: Nasutitermes corniger P3 segment gut microbial communities from Florida, USA - Single Cell Genome_Fibrobacteres-2 sp T8b


text: Environmental | Aquatic | Thermal springs | Hot (42-90C) | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Yellowstone National Park, WY

text: Combined lysosyme plus beat-beating

text: 44.6533633 N 110.4776669 W

text: hot springs metagenome

text: Hot spring microbial communities from Yellowstone National Park, Wyoming, USA - YNP1 Alice Springs, Crater Hills


text: Environmental | Aquatic | Freshwater | Microbialites | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Mexico:Cuatro Cienegas, Mexico

text: Cuatro Cienegas, Mexico

text: 26.983333 N 102.05 W

text: freshwater metagenome

text: Microbialite layer microbial community from Cuatro Cienegas, Mexico - layer 4


text: Host-associated | Mammals | Digestive system | Stomach | Rumen

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:University of Illinois Dairy Farm in Urbana, IL

text: Bos taurus

characteristic: host

text: Bovine rumen

text: 40.0886 N 88.2202 W

text: bovine metagenome

text: Bovine rumen viral communities from University of Illinois Dairy Farm in Urbana, IL, Cow rumen 7887


text: Environmental | Terrestrial | Soil | Loam | Grasslands

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

text: USA:Kanza Prairie, Kansas, USA

text: Kanza Prairie, Kansas, USA

text: 39.100992 N 96.608258 W

text: soil metagenome

text: Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA no BrdU F1.4TC


characteristic: External Id

text: Environmental | Terrestrial | Soil | Temperate forest | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Harvard Forest LTER, Petersham, MA, USA

text: Harvard Forest LTER, Petersham, MA, USA

text: 42.532967 N 72.180244 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF115


characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Barre woods, Petersham, MA, USA

text: 42.471116 N 72.17263 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF118


text: DOE Joint Genome Institute

characteristic: INSDC center name

text: live

text: Metagenome or environmental

text: Barre woods, Petersham, MA, USA

text: 42.471116 N 72.17263 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF120


text: DOE Joint Genome Institute

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: Harvard Forest LTER, Petersham, MA, USA

text: 42.532967 N 72.209488 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008


text: DOE Joint Genome Institute

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: Harvard Forest LTER, Petersham, MA, USA

text: 42.532967 N 72.209488 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF010


text: DOE Joint Genome Institute

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: Harvard Forest LTER, Petersham, MA, USA

text: 42.532967 N 72.209488 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF013


text: DOE Joint Genome Institute

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: Harvard Forest LTER, Petersham, MA, USA

text: 42.532967 N 72.209488 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Barre woods, Petersham, MA, USA

text: 42.471116 N 72.17263 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF018


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: Barre woods, Petersham, MA, USA

text: 42.471116 N 72.17263 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF020


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: geo loc name

text: Barre woods, Petersham, MA, USA

text: 42.471116 N 72.17263 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF026


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Barre woods, Petersham, MA, USA

characteristic: isolation source

text: 42.471116 N 72.17263 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF028


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Prospect hill, Petersham, MA, USA

text: 42.550409 N 72.180244 W

characteristic: lat lon

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF039


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Prospect hill, Petersham, MA, USA

text: 42.550409 N 72.180244 W

text: soil metagenome

characteristic: organism

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF045


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Harvard Forest LTER, Petersham, MA, USA

text: 42.532967 N 72.209488 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF006

characteristic: title


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Barre woods, Petersham, MA, USA

text: 42.471116 N 72.17263 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF029


text: Environmental | Terrestrial | Soil | Temperate forest | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Prospect hill, Petersham, MA, USA

text: 42.550409 N 72.180244 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF048


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Harvard Forest LTER, Petersham, MA, USA

text: Harvard Forest LTER, Petersham, MA, USA

text: 42.532967 N 72.209488 W

text: soil metagenome

text: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001


text: Environmental | Terrestrial | Soil | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: collection date

text: USA:Maryland Wetland Ecosystem, MD

text: FastDNA SPIN for Soil Kit

text: 38.85 N 76.53 W

text: soil metagenome

text: Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2+


text: Environmental | Aquatic | Freshwater | Microbialites | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Mexico:Cuatro Cienegas, Mexico

text: Cuatro Cienegas, Mexico

text: 26.983333 N 102.05 W

text: freshwater metagenome

text: Microbialite layer microbial communities from Cuatro Cienegas, Mexico - layer 3


text: Environmental | Aquatic | Marine | Intertidal zone | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Canada:Saanich Inlet, British Columbia, Canada

text: Saanich Inlet, British Columbia, Canada

text: 48.3629 N 123.2841 W

text: marine metagenome

text: Marine microbial communities from anoxic basin of Saanich Inlet - SI040908_200


text: Environmental | Aquatic | Marine | Intertidal zone | Microbialites

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Elkhorn Slough, California, USA

text: Elkhorn Slough, California, USA

text: 36.82188 N 121.744237 W

text: hypersaline lake metagenome

text: Hypersaline mat water microbial communities from Elkhorn Slough, California, USA - Microbial Mat (Micro/Lyngyba)


text: Engineered | Bioremediation | Tetrachloroethylene and derivatives | Chloroethene | Bioreactor

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Alameda Naval Air Station, Alameda, CA

text: Chloroethene-contaminated soil from the Alameda Naval Air Station, CA

text: 37.786111 N 122.318611 W

text: soil metagenome

text: Soil microbial communities from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene -196


text: Engineered | Solid waste | Grass | Composting | Bioreactor

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:University of California, Davis, USA

text: University of California, Davis, USA

text: 38.533333 N 121.75 W

text: compost metagenome

text: Green-waste compost microbial community at University of California, Davis, USA, from solid state bioreactor - Inoculum 16S


text: Environmental | Aquatic | Thermal springs | Hot (42-90C) | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Yellowstone National Park, WY

text: Combined lysosyme plus beat-beating

text: 44.733519 N 110.7 W

text: hot springs metagenome

text: Hot spring microbial communities from One Hundred Springs Plain, Yellowstone National Park, Wyoming, USA - YNP8 OSP Spring


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Yellowstone National Park, WY

text: Combined lysosyme plus beat-beating

text: 44.7242925 N 110.7056131 W

text: hot springs metagenome

text: Hot spring microbial communities from Yellowstone National Park, Wyoming, USA - YNP3 Monarch Geyser, Norris Geyser Basin


text: Engineered | Bioremediation | Hydrocarbon | Benzene | Bioreactor

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Canada:Toronto, Ontario

text: DNA pooled from several extractions, either a MoBio soil extraction kit or the recommended CTAB protocol

text: 43.658712 N 79.396003 W

text: bioreactor metagenome

text: Benzene-degrading bioreactor microbial communities from Toronto, Ontario, Canada, that are methanogenic - September 2009 gDNA_4


text: Environmental | Aquatic | Non-marine Saline and Alkaline | Hypersaline | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Antarctica:Deep Lake Antarctica

text: DNA was extracted by exposing filter to lysozyme, proteinase K, 10% SDS, freeze-thawing (3 cycles at 80deg C and 55 deg C), phenol-extracted twice and phenol-chloroform extracted once. It was then precipitated using isopropanol and re-solubilized in TE

text: 68.54 S 78.18 E

text: hypersaline lake metagenome

text: Hypersaline microbial communities from Antarctic Deep Lake, sample 13m 0.1um


text: Host-associated | Birds | Digestive system | Esophagus | Crop

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Puerto Rico:Cojedes, Venezuela

text: Opisthocomus hoazin

characteristic: host

text: Cojedes, Venezuela

text: 8.956944 N 68.299167 W

text: gut metagenome

text: Hoatzin crop microbial communities from Cojedes, Venezuela - fiber fraction


text: Environmental | Aquatic | Marine | Intertidal zone | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

text: Canada:Saanich Inlet, British Columbia, Canada

text: Saanich Inlet, British Columbia, Canada

text: 48.3629 N 123.2841 W

text: marine metagenome

text: Marine microbial communities from anoxic basin of Saanich Inlet - SI040908_120


characteristic: External Id

text: Host-associated | Plants | Roots | Rhizosphere | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Kellogg Biological Station, Michigan State University

text: 42.406189 N 85.40016 W

text: rhizosphere metagenome

text: Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1


text: Environmental | Aquatic | Marine | Hydrothermal vents | Unclassified

characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Atlantic Ocean:USA, Maryland, Natonal Institute of Health

text: Mid Atlantic Ridge, Atlantic Ocean

text: 39.0042816 N 77.1012173 W

text: marine metagenome

text: Marine hydrothermal vent microbial communities from Mid-Atlantic Ridge, Atlantic Ocean - sample 3


text: Environmental | Terrestrial | Soil | Loam | Grasslands

text: DOE Joint Genome Institute

characteristic: INSDC center name

text: live

text: Metagenome or environmental

text: USA:Kanza Prairie, Kansas, USA

text: Kanza Prairie, Kansas, USA

text: 39.100992 N 96.608258 W

text: soil metagenome

text: Amended soil microbial communities from Kansas Great Prairies, USA - acetate Total DNA F2.4TB


text: Environmental | Aquatic | Thermal springs | Hot (42-90C) | Unclassified

text: DOE Joint Genome Institute

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: USA:Yellowstone National Park, WY

text: Combined lysosyme plus beat-beating

text: 44.28600 N 110.87850 W

text: hot springs metagenome

text: Hot spring microbial communities from Yellowstone National Park, Wyoming, USA - YNP13 Bechler Spring


text: DOE Joint Genome Institute

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: USA:Yellowstone National Park, WY

text: Combined lysosyme plus beat-beating

text: 44.90485 N 110.404033 W

text: hot springs metagenome

text: Hot spring microbial communities from Yellowstone National Park, Wyoming, USA - YNP12 Calcite Springs, Tower Falls Region


text: Environmental | Aquatic | Thermal springs | Hot (42-90C) | Microbial mats

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Yellowstone National Park, WY

text: 44.96507 N 110.71215 W

text: hot springs metagenome

text: Hot spring microbial communities from Yellowstone National Park, Wyoming, USA - YNP20 Bath Lake Vista Annex - Purple-Sulfur Mats


text: Environmental | Aquatic | Non-marine Saline and Alkaline | Saline | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Great Salt Lake

text: CTAB/Phenol extraction

text: 41.454358 N 112.666397 W

text: salt lake metagenome

text: Saline water microbial communities from Great Salt Lake, Utah, sample from North Arm Rozel Point


text: Environmental | Aquatic | Freshwater | Lake | Algal bloom

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:LaBonte Lake, Laramie, Wyoming

text: LaBonte Lake, Laramie, Wyoming

text: 41.321 N 105.586 W

text: freshwater metagenome

text: Fresh water microbial communities from LaBonte Lake, Laramie, Wyoming, sample from algal/cyanobacterial bloom material peak-bloom 1


text: Environmental | Aquatic | Non-marine Saline and Alkaline | Hypersaline | Unclassified

text: DOE Joint Genome Institute

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: Antarctica:Deep Lake Antarctica

text: DNA was extracted by exposing filter to lysozyme, proteinase K, 10% SDS, freeze-thawing (3 cycles at 80deg C and 55 deg C), phenol-extracted twice and phenol-chloroform extracted once. It was then precipitated using isopropanol and re-solubilized in TE

text: 68.54 S 78.18 E

text: hypersaline lake metagenome

text: Hypersaline microbial communities from Antarctic Deep Lake, sample 24m 0.8um


text: DOE Joint Genome Institute

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: Australia:Deep Lake Antarctica

text: 68.54 S 78.18 E

text: hypersaline lake metagenome

text: Hypersaline microbial communities from Antarctic Deep Lake, sample 36m 0.1um


text: Environmental | Aquatic | Marine | Hydrothermal vents | Sediment

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Greece:Kolumbo Volcano, Greece

text: 36.5 N 25.45 E

text: marine sediment metagenome

text: Marine sediment microbial communities from Kolumbo Volcano mats, Greece - white/grey mat


text: Environmental | Aquatic | Freshwater | Lentic | Sediment

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA:Lake Washington, Seattle, Washington, USA

text: 47.07 N 122.27889 W

text: freshwater sediment metagenome

text: Freshwater sediment microbial communities from Lake Washington, Seattle, for methane and nitrogen Cycles - Microc enrich af exp to meth lab w 13Ccarbon-no added nitrate


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Lake Washington, Seattle, Washington, USA

text: 47.052 N 122.267889 W

text: freshwater sediment metagenome

text: Freshwater sediment microbial communities from Lake Washington, Seattle, for methane and nitrogen Cycles - from flow sorted aerobic no nitrate


text: DOE Joint Genome Institute

text: live

text: MIGS.eu

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Aspergillus stercorarius

text: CBS 428.93

characteristic: strain

text: Aspergillus stercoraria CBS 428.93 Standard Draft

text: culture from holotype of Aspergillus stercorarius

characteristic: type material


text: DOE Joint Genome Institute

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

text: Aspergillus neotritici

characteristic: organism

text: CBS 266.81

text: Aspergillus triticus CBS 266.81 Standard Draft

text: culture from reference material of Aspergillus tritici

characteristic: type-material


text: DOE Joint Genome Institute

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

text: Aspergillus sp. 'neoauricomus'

text: CBS 112787

text: Aspergillus neoauricomus CBS 112787 Standard Draft

characteristic: title


text: University of Rennes 1

text: live

text: Plant

text: mature

characteristic: dev stage

text: France: Bidassoa

characteristic: geo loc name

characteristic: isolate

text: Sporobolus x townsendii

text: leaves

characteristic: tissue

text: Plant sample from Sporobolus x townsendii


characteristic: External Id

text: Erasmus MC

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: Homo sapiens

characteristic: host

text: Mycoplasmoides pneumoniae

text: whole organsim

characteristic: sample type

text: Reference


FH

text: Erasmus MC

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: Homo sapiens

text: Mycoplasmoides pneumoniae FH

text: whole organsim

text: FH

text: Reference

text: type strain of Mycoplasma pneumoniae


text: Erasmus MC

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: Germany: Dresden

text: Homo sapiens

text: Mycoplasmoides pneumoniae

characteristic: organism

text: whole organsim

characteristic: strain

text: Reference


text: Erasmus MC

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: Netherlands: Rotterdam

text: Homo sapiens

text: Asymptomatic child

text: upper respiratory tract

characteristic: isolation source

text: Mycoplasmoides pneumoniae

text: whole organsim

text: Asymptomatic

characteristic: title


text: Erasmus MC

text: live

text: Microbe, viral or environmental

text: Netherlands: Rotterdam

characteristic: geo loc name

text: Homo sapiens

text: Child with upper RTI

characteristic: isolate

text: upper respiratory tract

text: Mycoplasmoides pneumoniae

text: whole organsim

text: Upper RTI


characteristic: External Id

text: Erasmus MC

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: Netherlands: Rotterdam

text: Homo sapiens

text: Child with upper RTI

text: upper respiratory tract

text: Mycoplasmoides pneumoniae

text: whole organsim

text: Upper RTI


text: Erasmus MC

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: Netherlands: Haarlem

text: Homo sapiens

characteristic: host

text: Adult with upper RTI

text: upper respiratory tract

text: Mycoplasmoides pneumoniae

text: whole organsim

text: Upper RTI


text: Erasmus MC

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: Netherlands: Rotterdam

text: Homo sapiens

text: Child with Lower RTI

text: upper respiratory tract

text: Mycoplasmoides pneumoniae

text: whole organsim

characteristic: sample type

text: Lower RTI


text: Erasmus MC

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

text: Netherlands: Haarlem

text: Homo sapiens

text: Adult with Lower RTI

text: upper respiratory tract

text: Mycoplasmoides pneumoniae

text: whole organsim

text: Lower RTI


text: Erasmus MC

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: Netherlands: Haarlem

text: Homo sapiens

text: child with Lower RTI

text: upper respiratory tract

text: Mycoplasmoides pneumoniae

text: whole organsim

text: Lower RTI


text: Erasmus MC

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: Netherlands: Rotterdam

text: Homo sapiens

text: Child with Lower RTI

text: upper respiratory tract

text: Mycoplasmoides pneumoniae

characteristic: organism

text: whole organsim

text: Lower RTI


text: Erasmus MC

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: Netherlands: Rotterdam

text: Homo sapiens

text: Child recovered from RTI

text: upper respiratory tract

text: Mycoplasmoides pneumoniae

text: whole organsim

characteristic: strain

text: Follow-up


text: multi-ingredient

characteristic: IFSAC Category

text: FDA Center for Food Safety and Applied Nutrition

text: live

text: Pathogen.env

text: environmental/food/other

text: FLAG

characteristic: collected by

text: USA:FL

text: poor boy sandwich

characteristic: isolation source

characteristic: ontological term

text: Listeria monocytogenes

text: food

characteristic: source type

text: Pathogen: environmental/food/other sample from Listeria monocytogenes

characteristic: title


characteristic: External Id

text: fish

characteristic: INSDC center name

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: FLAG

text: USA:FL

characteristic: geo loc name

text: smoked salmon

text: salmon (smoked):FOODON_03301805

text: Listeria monocytogenes

text: food


text: multi-ingredient

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: FLAG

text: USA:FL

text: cuban sandwich

text: cuban:ANCESTRO_0405, sandwich:FOODON_03301906

text: Listeria monocytogenes

text: food


text: multi-ingredient, chicken, dairy

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: FLAG

text: USA:FL

text: chicken parmesan sandwich

text: chicken:FOODON_03411457, parmesan cheese:FOODON_00003247, sandwich:FOODON_03301906

text: Listeria monocytogenes

text: food


text: meat

text: live

text: Pathogen.env

text: environmental/food/other

text: FLAG

text: USA:FL

text: alligator meat

text: alligator meat:FOODON_00002668

text: Listeria monocytogenes

characteristic: organism

text: food


text: dairy

text: live

text: Pathogen.env

text: environmental/food/other

text: FLAG

characteristic: collection date

text: USA:FL

text: cheese

text: cheese food product:FOODON_00001013

text: Listeria monocytogenes

text: food


text: turkey

characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FLAG

text: USA:FL

text: turkey breast

text: turkey breast:FOODON_00002690

text: Listeria monocytogenes

text: food

characteristic: strain


text: chicken

characteristic: IFSAC Category

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA

characteristic: collected by

text: USA:NY

text: chicken breast

characteristic: isolation source

text: chicken breast:FOODON_00002703

characteristic: ontological term

text: Campylobacter jejuni

text: food

text: Pathogen: environmental/food/other sample from Campylobacter jejuni


characteristic: External Id

text: chicken

characteristic: INSDC center name

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA

text: USA:CA

text: chicken breast

text: chicken breast:FOODON_00002703

text: Campylobacter jejuni

text: food

characteristic: source type

characteristic: title


text: Qing Liu, Biological Sciences, Clemson University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission model

characteristic: cell line

text: hiPSC-derived cells

characteristic: cell type

text: Homo sapiens

text: hiPSC-derived cells


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission package

text: hiPS cell

text: Homo sapiens

characteristic: organism

text: hiPSC


characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: hESC-derived cells

text: Homo sapiens

text: hESC-derived cells


text: live

text: Generic

text: hESC

text: Homo sapiens

text: hESC


text: multi-ingredient

characteristic: IFSAC Category

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA

characteristic: collected by

characteristic: collection date

characteristic: fda lab id

text: Taiwan

characteristic: geo loc name

text: dried noodle

text: noodle dried:FOODON_03306946

text: Salmonella enterica

text: GenomeTrakr

characteristic: project name

text: United States Food and Drug Administration|Office of Regulatory Affairs|Northeast Food and Feed Laboratory

characteristic: sequenced by

text: Typhimurium

characteristic: serovar

text: food

characteristic: strain

text: Pathogen: environmental/food/other sample from Salmonella enterica


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: FDA

text: Bangladesh

text: SEAWATER BLACK TIGER BLOCK FROZEN SHRIMP

characteristic: isolation source

text: Salmonella enterica

text: GenomeTrakr

text: IV 43:z4,z23:-

characteristic: title


text: meat

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: FERA

text: United Kingdom

text: retail meat

text: meat food product:FOODON_00001006

characteristic: ontological term

text: Campylobacter jejuni

characteristic: organism

text: GenomeTrakr

text: food

characteristic: source type


Streptomyces rubidus NRRL B-24619

text: USDA/ARS/NCAUR

text: live

text: Microbe, viral or environmental

characteristic: collection date

characteristic: culture-collection

text: China:Yanglin, Yunnan Province

characteristic: geo loc name

text: pine forest soil

text: Actinacidiphila rubida

text: pure culture

characteristic: sample type

text: NRRL B-24619

text: Microbe sample from Actinacidiphila rubida


Panthera uncia fecal microbiota

text: Qufu Normal University

text: live

text: Metagenome or environmental

text: Snow leopard (Panthera uncia) is a mysterious Carnivore animal that inhabits the high, remote mountains of Central Asia. We detected the complex bacterial communities in the feces of snow leapord for the first time by using a 16S rRNA clone library and high-throughput 454 pyrosequencing technologies.

characteristic: description

text: China: Qinghai

text: Panthera uncia

characteristic: host

text: 36.62 N 101.77 E

characteristic: lat lon

text: feces metagenome

text: Metagenome or environmental sample from snow leopard gut metagenome


characteristic: External Id

text: chicken

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FDA

characteristic: collected by

text: USA:OR

text: chicken breast

text: chicken breast:FOODON_00002703

text: Campylobacter jejuni

text: food

characteristic: strain


text: chicken

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: FDA

text: USA:MN

text: chicken breast

characteristic: isolation source

text: chicken breast:FOODON_00002703

characteristic: ontological term

text: Campylobacter jejuni

characteristic: organism

text: food

characteristic: title


Bacterial Isolte XU12

text: New Mexico State University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: Wild habitat

characteristic: env biome

text: China: Jiuzhaigou, Sichuan

characteristic: geo loc name

text: Anopheles sinensis

characteristic: host

text: 33.26 N 103.91 E

characteristic: lat lon

text: Stutzerimonas stutzeri

text: Culture in LB medium

characteristic: sample type

text: Pseudomonas stutzeri AR9-4 isolated from wild caught mosquito