characteristic: External Id

text: beef

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: Malbran Institute-Argentina

text: Argentina

text: ground beef

characteristic: isolation source

text: ground beef food product:FOODON_00001282

text: Escherichia coli

characteristic: organism

text: food

characteristic: strain

text: Pathogen: environmental/food/other sample from Escherichia coli


status: PUBLIC

text: clinical/research| human

tag: attribute

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: SRA accession

text: Malbran Institute-Argentina

characteristic: collected by

characteristic: collection date

text: Argentina

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: stool

characteristic: ontological term

text: Escherichia coli

characteristic: pfge primary enzyme pattern

characteristic: serovar

text: human

characteristic: source type

text: Pathogen: clinical or host-associated sample from Escherichia coli

characteristic: title

characteristic: toxin


characteristic: External Id

text: environmental-water

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: FLUFL

text: USA:FL

text: Suwannee river water

characteristic: isolation source

text: river water:ENVO_01000599

text: Salmonella enterica

characteristic: organism

text: environmental

characteristic: strain

text: Pathogen: environmental/food/other sample from Salmonella enterica


text: environmental-water

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: SRA accession

text: FLUFL

characteristic: collected by

text: USA:FL

text: Suwannee river water

text: river water:ENVO_01000599

text: Salmonella enterica

text: environmental


text: environmental-water

text: live

text: Pathogen.env

text: FLUFL

characteristic: collection date

text: USA:FL,Boys Ranch on the Suwannee River

characteristic: geo loc name

text: Suwannee river water

text: river water:ENVO_01000599

characteristic: ontological term

text: Salmonella enterica

text: environmental

characteristic: source type


characteristic: External Id

text: environmental

characteristic: INSDC last update

text: live

text: Pathogen.env

text: FDA

characteristic: fda lab id

text: USA:GA

text: environmental swab

text: environmental (swab or sampling):GENEPIO_0001732

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: project name

text: United States Food and Drug Administration|Office of Regulatory Affairs|Southeast Food and Feed Laboratory

characteristic: sequenced by

text: environmental

text: Pathogen: environmental/food/other sample from Listeria monocytogenes

characteristic: title


text: vegetables

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: FDA

text: USA:GA

text: fresh frozen vegetable

characteristic: isolation source

text: frozen:PATO_0001985|ood fresh:FOODON_00002457|plant fruit vegetable food product:FOODON_00002141

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

text: food

characteristic: strain


text: other (flavoring or seasoning)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FDA

characteristic: collected by

text: Ghana

text: watche leaves spice

text: Salmonella enterica

text: GenomeTrakr

text: food


characteristic: External Id

text: Intercellular Signalling in Cardiovascular Development & Disease, Centro Nacional de Investigaciones Cardiovasculares Carlos III (CNIC).

characteristic: INSDC last update

text: live

text: Generic

text: adult

characteristic: developmental stage

text: Danio rerio

text: apex of 3 hearts

text: AB

text: cryoinjury

characteristic: stress

text: Heart

characteristic: tissue

text: control

characteristic: treatment


text: live

text: Generic

characteristic: NCBI submission model

text: adult

text: Danio rerio

text: apex of 3 hearts

text: AB

text: cryoinjury

text: Heart

characteristic: title

text: RO gamma secretase inhibitor


Escherichia coli CFSAN029787

text: clinical/research| human

characteristic: IFSAC+ Category

text: live

text: Pathogen.cl

characteristic: NCBI submission package

text: clinical/host-associated

characteristic: collection date

text: Italy

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: stool

characteristic: isolation source

characteristic: ontological term

text: Escherichia coli

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

characteristic: serovar

text: human

characteristic: source type

text: Escherichia coli O96:H19 str. CFSAN029787 cultured isolate


Shigella sonnei CFSAN030807

characteristic: External Id

text: clinical/research, human

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: SRA accession

text: Somalia

text: Homo sapiens

text: Shigella sonnei

characteristic: organism

text: GenomeTrakr

text: Serotype group D

text: human

characteristic: strain

text: Shigella sonnei Serotype group D str. CFSAN030807 cultured isolate


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: GRU

text: SNP Genotypes (NGS)

characteristic: molecular data type

text: Homo sapiens

text: male

characteristic: sex

text: Mendelian

characteristic: study design

text: Familial Idiopathic Pulmonary Fibrosis

characteristic: study disease

characteristic: study name

text: Yes

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: DNA sample from a human male participant in the dbGaP study Yale Center for Mendelian Genomics (YCMG)

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: SRA accession

text: DNA

text: GRU

text: SNP Genotypes (NGS)

text: Homo sapiens

characteristic: organism

text: male

text: Mendelian

text: Familial Idiopathic Pulmonary Fibrosis

text: Yale Center for Mendelian Genomics (YCMG)

text: Yes


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: GRU

text: SNP Genotypes (NGS)

characteristic: molecular data type

text: Homo sapiens

text: female

characteristic: sex

text: Mendelian

text: Familial Idiopathic Pulmonary Fibrosis

text: Yes

text: DNA sample from a human female participant in the dbGaP study Yale Center for Mendelian Genomics (YCMG)


text: dbGaP

text: live

text: Generic

text: DNA

text: GRU

text: SNP Genotypes (NGS)

text: Homo sapiens

text: male

text: Mendelian

characteristic: study design

characteristic: study name

text: No

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: DNA

text: GRU

text: SNP Genotypes (NGS)

text: Homo sapiens

text: female

text: Mendelian

text: No

characteristic: title


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

characteristic: analyte type

text: CAMC-B

text: GRU

text: SNP Genotypes (NGS)

text: Homo sapiens

characteristic: organism

text: female

text: Mendelian

text: Familial Idiopathic Pulmonary Fibrosis

characteristic: study disease

text: Yes

text: CAMC-B

text: CAMC


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: biospecimen repository

text: ALVY-B

characteristic: biospecimen repository sample id

text: GRU

text: SNP Genotypes (NGS)

characteristic: molecular data type

text: Homo sapiens

text: female

characteristic: sex

text: Mendelian

characteristic: study design

text: Familial Idiopathic Pulmonary Fibrosis

characteristic: study name

text: Yes

characteristic: subject is affected

text: ALVY-B

text: ALVY


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: DNA

text: JERI-T

text: GRU

text: SNP Genotypes (NGS)

text: Homo sapiens

text: female

text: Mendelian

text: Familial Idiopathic Pulmonary Fibrosis

text: Yes

text: JERI-T

characteristic: submitted sample id

text: JERI

characteristic: submitted subject id

characteristic: submitter handle


text: dbGaP

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

characteristic: analyte type

text: ELCH-T

text: GRU

text: SNP Genotypes (NGS)

text: Homo sapiens

text: male

text: Mendelian

text: Familial Idiopathic Pulmonary Fibrosis

text: Yes

text: ELCH-T

text: ELCH

characteristic: title


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: GRU

text: SNP Genotypes (NGS)

characteristic: molecular data type

text: Homo sapiens

characteristic: organism

text: Mendelian

characteristic: study design

text: Familial Idiopathic Pulmonary Fibrosis

characteristic: study disease

text: Yes

text: DNA sample from a human participant in the dbGaP study Yale Center for Mendelian Genomics (YCMG)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: DNA

text: GRU

text: SNP Genotypes (NGS)

text: Homo sapiens

text: female

characteristic: sex

text: Mendelian

text: Familial Idiopathic Pulmonary Fibrosis

characteristic: study name

text: Yes

characteristic: subject is affected

text: HEM-SY


text: dbGaP

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

text: GRU

text: Homo sapiens

text: male

text: Mendelian

text: Familial Idiopathic Pulmonary Fibrosis

text: Yes

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle


text: dbGaP

text: live

text: Generic

characteristic: SRA accession

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: GRU

text: SNP Genotypes (NGS)

characteristic: molecular data type

text: Homo sapiens

characteristic: organism

text: male

text: Mendelian

text: Familial Idiopathic Pulmonary Fibrosis

text: Yes

text: LY-DD

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: DNA

text: GRU

text: SNP Genotypes (NGS)

text: Homo sapiens

text: female

characteristic: sex

text: Mendelian

characteristic: study design

text: Familial Idiopathic Pulmonary Fibrosis

characteristic: study disease

text: Yes

text: JORO


text: dbGaP

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

text: JORO-T

text: GRU

text: SNP Genotypes (NGS)

text: Homo sapiens

text: female

text: Mendelian

text: Familial Idiopathic Pulmonary Fibrosis

characteristic: study name

text: Yes

characteristic: subject is affected

text: JORO-T

characteristic: submitted sample id

text: JORO


text: dbGaP

text: live

text: Generic

characteristic: SRA accession

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: GRU

text: SNP Genotypes (NGS)

characteristic: molecular data type

text: Homo sapiens

text: male

text: Mendelian

text: Familial Idiopathic Pulmonary Fibrosis

text: Yes

text: LY-TE

characteristic: submitted subject id

characteristic: submitter handle


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: DNA

text: GRU

text: SNP Genotypes (NGS)

text: Homo sapiens

characteristic: organism

text: female

characteristic: sex

text: Mendelian

text: Familial Idiopathic Pulmonary Fibrosis

text: Yes

text: HEM-CD

characteristic: title


text: dbGaP

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

text: ELCH-B

text: GRU

text: SNP Genotypes (NGS)

text: Homo sapiens

text: male

text: Mendelian

characteristic: study design

text: Familial Idiopathic Pulmonary Fibrosis

characteristic: study disease

characteristic: study name

text: Yes

text: ELCH-B

text: ELCH


text: dbGaP

text: live

text: Generic

characteristic: SRA accession

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: GRU

text: SNP Genotypes (NGS)

characteristic: molecular data type

text: Homo sapiens

text: male

text: Mendelian

text: Familial Idiopathic Pulmonary Fibrosis

text: Yes

characteristic: subject is affected

characteristic: submitted sample id


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: DNA

text: GRU

text: SNP Genotypes (NGS)

text: Homo sapiens

characteristic: organism

text: female

text: Mendelian

text: Familial Idiopathic Pulmonary Fibrosis

text: Yes

characteristic: submitted subject id

characteristic: submitter handle


text: dbGaP

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

text: GRU

text: SNP Genotypes (NGS)

text: Homo sapiens

text: male

characteristic: sex

text: Mendelian

characteristic: study design

text: No

characteristic: title


text: dbGaP

text: live

text: Generic

characteristic: SRA accession

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: GRU

text: SNP Genotypes (NGS)

characteristic: molecular data type

text: Homo sapiens

text: female

text: Mendelian

characteristic: study name

text: No


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: DNA

text: GRU

text: SNP Genotypes (NGS)

text: Homo sapiens

text: male

text: Mendelian

text: Familial Idiopathic Pulmonary Fibrosis

characteristic: study disease

text: Yes

characteristic: subject is affected

characteristic: submitted sample id

text: LY-DB


text: dbGaP

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

text: GRU

text: SNP Genotypes (NGS)

text: Homo sapiens

characteristic: organism

text: female

text: Mendelian

text: Familial Idiopathic Pulmonary Fibrosis

text: Yes

text: LY-SC

characteristic: submitted subject id

characteristic: submitter handle


text: dbGaP

text: live

text: Generic

characteristic: SRA accession

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

text: ALVY-T

characteristic: biospecimen repository sample id

text: GRU

text: SNP Genotypes (NGS)

text: Homo sapiens

text: female

characteristic: sex

text: Mendelian

characteristic: study design

text: Familial Idiopathic Pulmonary Fibrosis

text: Yes

text: ALVY-T

text: ALVY

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: DNA

text: GRU

text: SNP Genotypes (NGS)

characteristic: molecular data type

text: Homo sapiens

text: female

text: Mendelian

text: Familial Idiopathic Pulmonary Fibrosis

characteristic: study disease

characteristic: study name

text: Yes

text: LY-MG


text: dbGaP

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

text: GRU

text: SNP Genotypes (NGS)

text: Homo sapiens

characteristic: organism

text: male

text: Mendelian

text: Familial Idiopathic Pulmonary Fibrosis

text: Yes

characteristic: subject is affected

characteristic: submitted sample id

text: LY-JEC


text: dbGaP

text: live

text: Generic

characteristic: SRA accession

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: GRU

text: SNP Genotypes (NGS)

text: Homo sapiens

text: Mendelian

text: Familial Idiopathic Pulmonary Fibrosis

text: Yes

characteristic: submitted subject id

characteristic: submitter handle


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: DNA

text: JERI-B

text: GRU

text: SNP Genotypes (NGS)

text: Homo sapiens

text: female

characteristic: sex

text: Mendelian

characteristic: study design

text: Familial Idiopathic Pulmonary Fibrosis

text: Yes

text: JERI-B

text: JERI

characteristic: title


text: dbGaP

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

text: GRU

text: Homo sapiens

text: male

text: Mendelian

text: Familial Idiopathic Pulmonary Fibrosis

characteristic: study disease

characteristic: study name

text: Yes


text: environmental

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

characteristic: SRA accession

text: FDA

characteristic: collected by

characteristic: collection date

characteristic: fda lab id

text: USA:OH

characteristic: geo loc name

text: environmental swab

characteristic: isolation source

characteristic: ontological term

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: environmental

characteristic: source type

characteristic: strain


characteristic: External Id

text: fish

characteristic: IFSAC Category

text: California Department of Public Health

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: Cindy Wu

text: USA

text: smoked salmon

text: 34.4258 N 119.7142 W

characteristic: lat lon

text: salmon (smoked):FOODON_03301805

text: Listeria monocytogenes

text: food

text: Listeria monocytogenes isolate from smoke salmon

characteristic: title


text: clinical/research| human

characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: NCBI submission package

characteristic: SRA accession

text: Arizona Department of Health

characteristic: collected by

characteristic: collection date

text: USA:AZ

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: stool

text: Salmonella enterica

text: paratyphi

characteristic: serovar

text: human

text: Pathogen: clinical or host-associated sample from Salmonella enterica


characteristic: External Id

text: environmental

text: live

text: Pathogen.env

text: FDA

characteristic: fda lab id

text: USA:GA

text: environmental swab

characteristic: isolation source

characteristic: ontological term

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: environmental

characteristic: source type

characteristic: strain


text: environmental

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: FDA

text: USA:CA

text: environmental swab

text: Listeria monocytogenes

text: GenomeTrakr

text: United States Food and Drug Administration|Office of Regulatory Affairs|Pacific Southwest Food and Feed Laboratory

text: environmental

characteristic: title


characteristic: External Id

text: multi-ingredient| other (flavoring or seasoning)

text: FDA Center for Food Safety and Applied Nutrition

text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: FDA

characteristic: collected by

characteristic: collection date

text: India

characteristic: geo loc name

text: garam masala hot spice mixture powder

text: food (powdered):FOODON_00002976| spice mixture:FOODON_03304292

text: Salmonella enterica

text: GenomeTrakr

text: food


text: dietary supplement

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA

characteristic: fda lab id

text: Hong Kong

text: dietary supplement zaocys dhumnades cantor wushe

characteristic: isolation source

text: dietary food supplement:FOODON_03315918|ptyas dhumnades:NCBITAXON_1809554

characteristic: ontological term

text: Salmonella enterica

characteristic: organism

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: food

text: Pathogen: environmental/food/other sample from Salmonella enterica


FDAFSW-906796 C2

text: dietary supplement

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA

text: FSW-906796 C2

text: Hong Kong

text: Salmonella enterica

text: GenomeTrakr

text: food

characteristic: source type

text: FDAFSW-906796 C2

characteristic: strain


characteristic: External Id

text: herbs| seeds

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: FDA

text: Viet Nam

text: basil seed

text: basil food product:FOODON_00003044| seed:po_0009010

text: Salmonella enterica

text: GenomeTrakr

text: food

characteristic: title


Caspian Sea Metagenome

text: This sample group is the combination of the 3 individual BioSamples: SAMN03444909, SAMN03444948, and SAMN03444961.

characteristic: Caspian Sea Metagenome

text: University of Tehran / Iranian Biological Resource Center

text: live

text: Metagenome or environmental

characteristic: collection date

text: The Caspian Sea is the world's largest enclosed body of water. The northern part of the Caspian sea is largely a freshwater habitat. Salinity increases gradually towards the middle part, and the southernmost part is a stable brackish ecosystem with 1.1% salinty (ca. one third of the open ocean). This biosample contains metagenomic data from depth profile of the Caspian. Briefly, 50L of water was collected from each depth and filtered serially through 20, 5 and 0.22 micron filters. This metagenome deposited here was obtained by sequencing (Illumina HiSeq) of the 0.22 micron fraction.

characteristic: description

text: Iran: Caspian Sea near Babolsar

characteristic: geo loc name

text: Capian Sea

characteristic: isolation source

text: aquatic metagenome

text: Caspian Sea Metagenome


text: environmental

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

text: FDA

characteristic: collected by

characteristic: fda lab id

text: USA:GA

text: environmental swab

text: environmental (swab or sampling):GENEPIO_0001732

characteristic: ontological term

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

characteristic: project name

text: United States Food and Drug Administration|Office of Regulatory Affairs|Southeast Food and Feed Laboratory

characteristic: sequenced by

text: environmental

text: Pathogen: environmental/food/other sample from Listeria monocytogenes


characteristic: External Id

text: vegetable row crops (leafy)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FDA

text: USA:FL

text: kale

text: kale leaf (raw):FOODON_03304859

text: Listeria monocytogenes

text: GenomeTrakr

text: food

characteristic: source type

characteristic: strain


text: seeded vegetables (legumes)| sprouts

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: FDA

characteristic: collection date

text: USA:CA

characteristic: geo loc name

text: soybean sprout

text: soybean (whole):FOODON_03301415|sprout:FOODON_03420183

text: Listeria monocytogenes

text: GenomeTrakr

text: United States Food and Drug Administration|Office of Regulatory Affairs|San Francisco Laboratory

text: food

characteristic: title


text: environmental

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

text: FDA

characteristic: collected by

characteristic: fda lab id

text: USA:CA

text: environmental swab

characteristic: isolation source

characteristic: ontological term

text: Salmonella enterica

characteristic: organism

text: GenomeTrakr

text: environmental


characteristic: External Id

text: clinical/research, human

text: Brigham & Women's Hospital

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.cl

text: BWH

text: USA: Boston

text: Homo sapiens

characteristic: host

text: urine

text: 42.3601 N 71.0589 W

characteristic: lat lon

text: Klebsiella pneumoniae

text: human

text: Pathogen: clinical or host-associated sample from Klebsiella pneumoniae


text: clinical/research, human

text: Brigham & Women's Hospital

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: SRA accession

text: Brigham and Women's Hospital

text: USA: Boston

text: Homo sapiens

characteristic: isolate

text: sputum

text: 42.3601 N 71.0589 W

text: Enterobacter hormaechei

text: human

characteristic: source type

text: Pathogen: clinical or host-associated sample from Enterobacter hormaechei


text: nuts

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: FDA

characteristic: collected by

characteristic: collection date

text: USA:CT

characteristic: geo loc name

text: whole macadamia nut

text: nut (whole):FOODON_03303171|macadamia nut:FOODON_00003003

text: Salmonella enterica

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: food

characteristic: strain

characteristic: title


Apisc venom-gland transcriptome

characteristic: External Id

text: Florida State University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Model organism or animal

text: Venom-gland transcriptome for Agkistrodon piscivorus

characteristic: description

text: Adult

characteristic: dev stage

text: Agkistrodon conanti

characteristic: organism

text: female

characteristic: sex

text: Venom gland

characteristic: tissue

text: Model organism or animal sample from Agkistrodon conanti


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Yes

characteristic: is technical control

text: Homo sapiens

text: female

text: Prospective Longitudinal Cohort

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Sample from a human female participant in the dbGaP study Omics in Latinos (Ola) - Genetic Analysis of HCHS/SOL


characteristic: External Id

text: environmental

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: Washington State Department of Health | Public Health Laboratories

characteristic: collected by

characteristic: collection date

text: USA:WA

characteristic: geo loc name

text: environmental swab

characteristic: isolation source

characteristic: ontological term

text: Escherichia coli

characteristic: serovar

text: environmental

characteristic: source type

characteristic: strain

text: Pathogen: environmental/food/other sample from Escherichia coli

characteristic: title


text: seeded vegetables (legumes)| sprouts

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: VA

text: USA:VA

text: soybean sprout

text: Listeria monocytogenes

characteristic: organism

text: food


characteristic: External Id

text: environmental-factory/production facility

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: ApaI

text: Wisconsin State Laboratory of Hygiene

text: USA:WI

text: environmental swab sponge drum lift

text: environmental (swab or sampling):GENEPIO_0001732| environmental sponge:CURATION_0000359

text: Listeria monocytogenes

text: AscI

characteristic: pfge primary enzyme pattern

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: environmental


text: clinical/research

characteristic: INSDC last update

text: live

text: Pathogen.env

text: FDA

characteristic: collected by

text: FDA SAFE 27

text: Salmonella enterica subsp. diarizonae

text: GenomeTrakr

text: inclusivity SAFE

text: cell culture

characteristic: sample type

text: diarizonae

characteristic: subspecies

text: Pathogen: environmental/food/other sample from Salmonella enterica subsp. diarizonae


text: clinical/research

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: FDA

text: FDA SAFE 46

characteristic: ontological term

text: Salmonella bongori serovar [1],40:z35:-

text: GenomeTrakr

text: inclusivity SAFE

text: cell culture

characteristic: serovar

characteristic: strain

text: Pathogen: environmental/food/other sample from Salmonella bongori [1],40:z35:-


text: clinical/research

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: FDA SAFE 70

characteristic: organism

text: GenomeTrakr

text: inclusivity SAFE

text: cell culture

text: Typhimurium

text: enterica

text: Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica serovar Typhimurium

characteristic: title


characteristic: External Id

text: clinical/research

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: FDA SAFE 71

text: Salmonella enterica subsp. enterica serovar Typhimurium

text: GenomeTrakr

text: inclusivity SAFE

text: cell culture

text: Typhimurium

text: enterica


text: clinical/research

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA SAFE 74

text: Salmonella enterica subsp. enterica

text: GenomeTrakr

characteristic: project name

text: inclusivity SAFE

text: cell culture

characteristic: sequenced by

text: 4,5,12, i-

text: enterica

text: Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica


text: clinical/research

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA SAFE 75

text: Salmonella enterica subsp. enterica

text: GenomeTrakr

text: inclusivity SAFE

text: cell culture

characteristic: sample type

text: 4,5,12, i-

text: enterica

characteristic: subspecies


text: clinical/research

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FDA SAFE 76

characteristic: ontological term

text: Salmonella enterica subsp. enterica

text: GenomeTrakr

text: inclusivity SAFE

text: cell culture

text: 4,5,12, i-

characteristic: serovar

text: enterica


text: clinical/research

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: FDA SAFE 15

text: Salmonella enterica subsp. salamae

text: GenomeTrakr

text: inclusivity SAFE

text: cell culture

characteristic: strain

text: salamae

text: Pathogen: environmental/food/other sample from Salmonella enterica subsp. salamae


text: other aquatic animals

characteristic: IFSAC Category

text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: collection date

text: USA:CA

characteristic: geo loc name

text: FDA SAFE 82; 2105 H

text: frog leg

characteristic: isolation source

text: frog leg:FOODON_00002567

text: Salmonella enterica subsp. enterica

characteristic: organism

text: inclusivity SAFE

text: cell culture

text: Saphra

text: food

characteristic: source type

text: enterica

characteristic: title


characteristic: External Id

text: multi-ingredient, nuts, other (confectionery)

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: USA:IL

text: FDA SAFE 83; 1465 H

text: almond malted milk nougat candy bar

text: almond milk:FOODON_00003157, almond candy food product:FOODON_00001585, candy bar:FOODON_03306423, nougat:FOODON_03316438

text: inclusivity SAFE

text: cell culture

text: Rubislaw

text: food

text: enterica

text: Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica serovar Rubislaw


text: mollusks (non-bi-valve)

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

text: FDA SAFE 87; 3030 H

text: live snail

characteristic: ontological term

text: inclusivity SAFE

text: cell culture

characteristic: sample type

text: Tornow

text: animal

text: enterica

characteristic: subspecies

text: Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica serovar Tornow


text: mollusks (non-bi-valve)

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: FDA SAFE 90; 3029 H

text: live snail

text: inclusivity SAFE

text: cell culture

text: Brisbane

characteristic: serovar

text: animal

characteristic: strain

text: enterica

text: Pathogen: environmental/food/other sample from Salmonella enterica subsp. enterica serovar Brisbane


text: nuts

characteristic: IFSAC Category

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: Philippines

characteristic: geo loc name

text: desiccated coconut

text: coconut (desiccated):FOODON_03317671

text: Salmonella enterica

text: inclusivity SAFE

text: cell culture

text: food

text: Pathogen: environmental/food/other sample from Salmonella enterica


FDA884206 32-1

text: environmental

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: FDA

characteristic: collected by

characteristic: collection date

text: 884206 32-1

characteristic: fda lab id

text: USA:IL

text: environmental swab

characteristic: isolation source

text: environmental (swab or sampling):GENEPIO_0001732

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

characteristic: project name

text: United States Food and Drug Administration|Office of Regulatory Affairs|Arkansas Laboratory

characteristic: sequenced by

text: environmental

characteristic: source type

text: FDA884206 32-1

text: Pathogen: environmental/food/other sample from Listeria monocytogenes


FDA884206 72-1

characteristic: External Id

text: environmental

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: FDA

text: 884206 72-1

text: USA:IL

text: environmental swab

characteristic: ontological term

text: Listeria monocytogenes

text: GenomeTrakr

text: environmental

text: FDA884206 72-1

characteristic: title


FDA884206 89-1

text: environmental

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: FDA

text: 884206 89-1

text: USA:IL

characteristic: geo loc name

text: environmental swab

text: Listeria monocytogenes

text: GenomeTrakr

text: environmental

text: FDA884206 89-1

characteristic: strain


FDA884206 111-6

text: environmental

text: live

text: Pathogen.env

text: FDA

characteristic: collected by

characteristic: collection date

text: 884206 111-6

characteristic: fda lab id

text: USA:IL

text: environmental swab

characteristic: isolation source

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

characteristic: project name

text: environmental

text: FDA884206 111-6


FDA884206 126-6

characteristic: External Id

text: environmental

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: FDA

text: 884206 126-6

text: USA:IL

text: environmental swab

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: sequenced by

text: environmental

characteristic: source type

text: FDA884206 126-6


FDA884206 149-6

text: environmental

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: FDA

text: 884206 149-6

text: USA:IL

text: environmental swab

characteristic: ontological term

text: Listeria monocytogenes

text: GenomeTrakr

text: environmental

text: FDA884206 149-6

characteristic: title


Bacillus galactosidilyticus G25-74

text: Institute of Life Sciences and Technology

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: collection date

text: China

characteristic: geo loc name

text: Lederbergia galactosidilytica

text: cell culture

characteristic: sample type

characteristic: strain

text: Microbe sample from Lederbergia galactosidilytica


characteristic: External Id

text: environmental-water

text: live

characteristic: Isolate name alias

text: Pathogen.env

characteristic: SRA accession

text: FDA Contracted Laboratory

text: USA:WA

characteristic: isolate name alias

text: water

characteristic: isolation source

text: Salmonella enterica

characteristic: organism

text: environmental


text: environmental

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: FDA Contracted Laboratory

text: USA:WA

text: soil

text: Salmonella enterica

text: environmental

characteristic: source type


text: grains

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:NE

text: wheat

characteristic: ontological term

text: Salmonella enterica

text: food

characteristic: title


text: beef

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: FDA Contracted Laboratory

characteristic: collection date

text: USA:MN

characteristic: geo loc name

text: boneless beef

text: beef food product:FOODON_00001041

text: Salmonella enterica

text: food

characteristic: strain


characteristic: External Id

text: veterinary clinical/research| wild animal

text: live

characteristic: Isolate name alias

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:WA

text: corn snake cage swab

text: Salmonella enterica

text: animal


characteristic: IFSAC+ Category

text: live

text: Pathogen.env

text: FDA Contracted Laboratory

text: USA:WA

characteristic: isolate name alias

text: bearded dragon swab

characteristic: isolation source

text: pogona vitticeps:NCBITAXON_103695, swab:NCIT_C17627

text: Salmonella enterica

characteristic: organism

text: animal


text: beef

characteristic: IFSAC Category

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:MN

text: boneless beef

text: beef food product:FOODON_00001041

text: Salmonella enterica

text: food

characteristic: source type


text: multi-ingredient| poultry

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:WA

text: chicken meal

text: chicken:FOODON_03411457|meal (ready-to-consume):FOODON_03316468

characteristic: ontological term

text: Salmonella enterica

text: food

characteristic: title


characteristic: External Id

text: vegetable row crops (leafy)

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: FDA Contracted Laboratory

characteristic: collection date

text: USA:CA

characteristic: geo loc name

text: leafy green

text: leafy vegetable:FOODON_03411566

text: Salmonella enterica

text: food

characteristic: strain


text: vegetable row crops (leafy)

text: live

characteristic: Isolate name alias

text: Pathogen.env

text: FDA Contracted Laboratory

text: USA:CA

characteristic: isolate name alias

text: leafy green

characteristic: isolation source

text: leafy vegetable:FOODON_03411566

text: Salmonella enterica

text: food


text: nuts

characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:WA

text: cashew

text: cashew nut (whole, raw):FOODON_03301357

text: Salmonella enterica

characteristic: organism

text: food


text: meat

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:WA

text: raw meat

text: meat (raw):FOODON_03306429

text: Salmonella enterica

text: food

characteristic: source type


text: nuts

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:CA

text: macadamia nut

text: macadamia nut:FOODON_00003003

characteristic: ontological term

text: Salmonella enterica

text: food

characteristic: title


characteristic: External Id

text: animal feed

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: FDA Contracted Laboratory

characteristic: collection date

text: USA:CA

characteristic: geo loc name

text: pet treat chicken

text: chicken:FOODON_03411457, pet treat:GENEPIO_0001056

text: Salmonella enterica

text: environmental


text: melon fruit

text: live

characteristic: Isolate name alias

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:WA

text: cantaloupe

characteristic: isolation source

text: Salmonella enterica

text: food

characteristic: strain


text: vegetable row crops (leafy)

characteristic: IFSAC Category

characteristic: INSDC center name

text: live

text: Pathogen.env

text: FDA Contracted Laboratory

text: USA:CA

characteristic: isolate name alias

text: baby spinach

text: baby spinach:FOODON_00002977

text: Salmonella enterica

text: food


text: environmental

characteristic: IFSAC+ Category

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:WA

text: environmental

text: Salmonella enterica

characteristic: organism

text: environmental


text: environmental

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: FDA Contracted Laboratory

text: USA:CA

text: environmental swab

characteristic: ontological term

text: Salmonella enterica

text: environmental

characteristic: source type


characteristic: External Id

text: nuts

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: OSF

characteristic: collected by

characteristic: collection date

text: USA:CA

characteristic: geo loc name

text: pistachio

text: pistachio nut (whole, raw):FOODON_03301825

text: Salmonella enterica

text: food

characteristic: title


text: vegetable row crops (leafy)

characteristic: INSDC center name

text: live

characteristic: Isolate name alias

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:AZ

characteristic: isolate name alias

text: leafy green

characteristic: isolation source

text: leafy vegetable:FOODON_03411566

text: Salmonella enterica

text: food

characteristic: strain


text: animal feed

characteristic: IFSAC+ Category

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:CA

text: turkey mixture feed

text: domestic turkey:foodon_03414166, mixture:chebi_60004, food product for animal:foodon_03309997

text: Salmonella enterica

characteristic: organism

text: environmental


text: nuts

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:CO

text: cashew

text: cashew nut (whole, raw):FOODON_03301357

characteristic: ontological term

text: Salmonella enterica

text: food

characteristic: source type


characteristic: External Id

text: vegetable row crops (leafy)

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: FDA Contracted Laboratory

characteristic: collection date

text: USA:CA

characteristic: geo loc name

text: baby spinach

text: baby spinach:FOODON_00002977

text: Salmonella enterica

text: food


text: vegetable row crops (leafy)

characteristic: INSDC center name

text: live

characteristic: Isolate name alias

text: Pathogen.env

text: FDA Contracted Laboratory

text: USA:CA

characteristic: isolate name alias

text: baby spinach

text: baby spinach:FOODON_00002977

text: Salmonella enterica

text: food

characteristic: title


text: vegetable row crops (leafy)

characteristic: IFSAC+ Category

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:CA

text: kale

characteristic: isolation source

text: kale leaf (raw):FOODON_03304859

text: Salmonella enterica

text: food

characteristic: strain


text: vegetable row crops (leafy)

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:CA

text: leafy green

text: leafy vegetable:FOODON_03411566

text: Salmonella enterica

characteristic: organism

text: food


text: vegetable row crops (leafy)

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:AZ

text: baby spinach

text: baby spinach:FOODON_00002977

characteristic: ontological term

text: Salmonella enterica

text: food

characteristic: source type


characteristic: External Id

text: vegetable row crops (leafy)

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: FDA Contracted Laboratory

characteristic: collection date

text: USA:AZ

characteristic: geo loc name

text: kale

text: kale leaf (raw):FOODON_03304859

text: Salmonella enterica

text: food


text: beef

characteristic: INSDC center name

text: live

characteristic: Isolate name alias

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:NE

characteristic: isolate name alias

text: boneless beef

text: beef food product:FOODON_00001041

text: Salmonella enterica

text: food

characteristic: title


text: nuts

characteristic: IFSAC+ Category

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:WA

text: almond butter

characteristic: isolation source

text: almond butter:FOODON_03310875

text: Salmonella enterica

text: food

characteristic: strain


text: nuts

characteristic: IFSAC Category

characteristic: INSDC last update

text: live

text: Pathogen.env

text: FDA Contracted Laboratory

text: USA:WA

text: almond butter

text: almond butter:FOODON_03310875

text: Salmonella enterica

characteristic: organism

text: food


text: environmental-factory/production facility

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:OR

text: environmental swab sponge

text: Salmonella enterica

text: environmental


characteristic: External Id

text: nuts| seeded vegetables (legumes)

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: FDA Contracted Laboratory

characteristic: collection date

text: USA:GA

text: peanut butter

text: peanut butter:FOODON_03306867

characteristic: ontological term

text: Salmonella enterica

text: food

characteristic: source type


characteristic: INSDC center name

text: live

characteristic: Isolate name alias

text: Pathogen.env

text: FDA Contracted Laboratory

text: USA:TX

characteristic: geo loc name

characteristic: isolate name alias

text: environmental swab sponge

text: environmental (swab or sampling):GENEPIO_0001732| environmental sponge:CURATION_0000359

text: Listeria monocytogenes

text: environmental

characteristic: title


text: environmental

characteristic: IFSAC+ Category

characteristic: INSDC first public

text: live

text: Pathogen.env

text: FDA Contracted Laboratory

text: USA:CA

text: environmental swab

characteristic: isolation source

text: Listeria monocytogenes

text: environmental

characteristic: strain


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

text: FDA Contracted Laboratory

text: USA:GA

text: environmental swab sponge

text: Listeria monocytogenes

characteristic: organism

text: environmental


characteristic: External Id

text: seeded vegetables (other)

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:WA

text: corn

text: corn (vegetable) food product:FOODON_00001765

text: Listeria monocytogenes

text: food


text: seeded vegetables (other)

characteristic: INSDC center name

text: live

text: Pathogen.env

text: FDA Contracted Laboratory

characteristic: collection date

text: USA:WA

text: corn

characteristic: ontological term

text: Listeria monocytogenes

text: food

characteristic: source type


text: fish

text: live

characteristic: Isolate name alias

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:NJ

characteristic: geo loc name

characteristic: isolate name alias

text: seared tuna

text: Listeria monocytogenes

text: food

characteristic: title


text: chicken

characteristic: IFSAC+ Category

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:CA

text: chicken

characteristic: isolation source

text: Listeria monocytogenes

text: food

characteristic: strain


text: environmental

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

text: FDA Contracted Laboratory

text: USA:RI

text: environmental swab

text: Listeria monocytogenes

characteristic: organism

text: environmental


characteristic: External Id

text: fish

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:NJ

text: tuna

text: Listeria monocytogenes

text: food


text: environmental

characteristic: INSDC center name

text: live

text: Pathogen.env

text: FDA Contracted Laboratory

characteristic: collection date

text: USA:WA

text: environmental swab

characteristic: ontological term

text: Listeria monocytogenes

text: environmental

characteristic: source type


text: environmental

text: live

characteristic: Isolate name alias

text: Pathogen.env

text: FDA Contracted Laboratory

text: USA:GA

characteristic: geo loc name

characteristic: isolate name alias

text: environmental swab

text: Listeria monocytogenes

text: environmental

characteristic: title


text: pome fruit

characteristic: IFSAC+ Category

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:WA

text: apple

characteristic: isolation source

text: apple (whole):FOODON_00002473

text: Listeria monocytogenes

text: food

characteristic: strain


text: environmental

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

text: FDA Contracted Laboratory

text: USA:CA

text: environmental

text: Listeria monocytogenes

characteristic: organism

text: environmental


characteristic: External Id

text: turkey

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:CA

text: turkey

text: domestic turkey:FOODON_03414166

text: Listeria monocytogenes

text: food


text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Colon

characteristic: body site

text: HMB-PUB-MDS

text: No

characteristic: is tumor

text: Homo sapiens

text: female

characteristic: sex

text: Case Set

characteristic: study design

text: Colorectal Neoplasms

characteristic: study disease

characteristic: study name

text: Yes

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Non-tumor DNA sample from Colon of a human female participant in the dbGaP study Megabase-scale Haplotyped Genomic Analysis of Normal and Cancer Genomes


characteristic: External Id

text: Centers for Disease Control and Prevention

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: collection date

text: ATCC: BAA-2708

characteristic: culture collection

text: USA:MN

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: pertussis

characteristic: host disease

text: Bordetella pertussis

characteristic: organism

characteristic: strain

text: Pathogen: clinical or host-associated sample from Bordetella pertussis

characteristic: title


text: sub-tropical fruit

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC center name

text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: Texas Department of State Health Services

characteristic: collected by

characteristic: fda lab id

text: USA:TX

text: avocado

characteristic: isolation source

text: avocado (whole, raw):FOODON_03305236

characteristic: ontological term

text: Salmonella enterica

text: food

characteristic: source type

text: Pathogen: environmental/food/other sample from Salmonella enterica


characteristic: External Id

text: sub-tropical fruit

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

characteristic: collection date

text: USA:TX

text: avocado

text: avocado (whole, raw):FOODON_03305236

text: Salmonella enterica

text: food


text: multi-ingredient| meat

text: live

text: Pathogen.env

text: environmental/food/other

text: USA:TX

characteristic: geo loc name

text: sausage

text: sausage (formed):FOODON_03315904

text: Listeria monocytogenes

characteristic: organism

text: food

characteristic: strain

text: Pathogen: environmental/food/other sample from Listeria monocytogenes

characteristic: title


text: environmental

characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: SRA accession

text: USA:TX

text: environmental swab

text: environmental (swab or sampling):GENEPIO_0001732

text: Listeria monocytogenes

text: environmental


text: multi-ingredient| pork

text: live

text: Pathogen.env

text: environmental/food/other

characteristic: collected by

text: USA:TX

text: pork beef sausage

characteristic: isolation source

text: pork sausage:FOODON_00002729|beef sausage:FOODON_00002958

characteristic: ontological term

text: Listeria monocytogenes

text: food


characteristic: External Id

text: multi-ingredient| beans| seeded vegetables (legumes)

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: USA:TX

text: hummus

text: Listeria monocytogenes

text: food

characteristic: source type


text: environmental

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: USA:TX

text: environmental swab

text: environmental (swab or sampling):genepio_0001732

text: Listeria monocytogenes

text: environmental


text: multi-ingredient

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

characteristic: collection date

text: USA:TX

characteristic: geo loc name

text: food

text: Listeria monocytogenes

text: food


text: multi-ingredient| turkey

text: live

text: Pathogen.env

text: environmental/food/other

text: USA:TX

text: turkey sandwich

text: turkey sandwich:FOODON_03310573

text: Listeria monocytogenes

characteristic: organism

text: food

characteristic: strain

characteristic: title


text: sub-tropical fruit

characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

characteristic: fda lab id

text: USA:TX

text: avocado

text: avocado (whole, raw):foodon_03305236

text: Listeria monocytogenes

text: food


text: sub-tropical fruit

text: live

text: Pathogen.env

characteristic: SRA accession

text: TX

characteristic: collected by

text: USA:TX

text: avocado

characteristic: isolation source

text: avocado (whole, raw):FOODON_03305236

characteristic: ontological term

text: Listeria monocytogenes

text: food


characteristic: External Id

text: sub-tropical fruit

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: USA:TX

text: avocado

text: avocado (whole, raw):foodon_03305236

text: Listeria monocytogenes

text: food

characteristic: source type


text: beef

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

characteristic: collection date

text: USA:TX

text: ground beef

text: ground beef food product:foodon_00001282

text: Escherichia coli

characteristic: serovar

text: food

text: Pathogen: environmental/food/other sample from Escherichia coli


text: beef

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

text: environmental/food/other

text: USA:TX

characteristic: geo loc name

text: beef trim

text: beef trim:FOODON_03311508

text: Escherichia coli

characteristic: organism

text: food

characteristic: strain

characteristic: title


text: dairy| other (confectionery)

characteristic: INSDC center name

text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: FDA

characteristic: collected by

text: USA:TX

text: ice cream

text: ice cream food product:FOODON_00001045

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: food


characteristic: External Id

text: environmental

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: FDA

characteristic: fda lab id

text: USA:NY

text: environmental swab

characteristic: isolation source

characteristic: ontological term

text: Listeria monocytogenes

text: GenomeTrakr

text: United States Food and Drug Administration|Office of Regulatory Affairs|Northeast Food and Feed Laboratory

text: environmental

characteristic: source type


text: 2072A, HSC North, Floor 2, MicroBiology, Immunology, and Cell Biology, West Virginia University

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: MLL4 (PMCID: PMC3869375)

characteristic: chip antibody

text: Mus musculus

text: Naive CD4 T cells

text: C57BL/6 x 129

text: lymph nodes

characteristic: tissue

text: wild type

characteristic: treatment


characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Mus musculus

characteristic: organism

text: Naive CD4 T cells

text: C57BL/6 x 129

characteristic: strain

text: lymph nodes

text: Input

characteristic: title

text: wild type


characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Mus musculus

text: Naive CD4 T cells

text: C57BL/6 x 129

text: lymph nodes

text: wild type


text: live

text: Generic

text: Mus musculus

text: Naive CD4 T cells

text: C57BL/6 x 129

text: lymph nodes

text: Mll4 KO


text: other (flavoring or seasoning)

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA

characteristic: collected by

characteristic: collection date

characteristic: fda lab id

text: China

characteristic: geo loc name

text: white pepper powder

characteristic: isolation source

text: white pepper (ground):FOODON_03304045|food (powdered):FOODON_00002976

characteristic: ontological term

text: Salmonella enterica

text: GenomeTrakr

characteristic: project name

text: United States Food and Drug Administration|Office of Regulatory Affairs|San Francisco Laboratory

characteristic: sequenced by

text: food


text: seeded vegetables (solanaceous)

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: FDA

text: Thailand

text: thai dried chili pepper

text: birds eye chili:FOODON_00002736|chili pepper (dried):FOODON_03302554

text: Salmonella enterica

text: GenomeTrakr

text: food

characteristic: source type


characteristic: External Id

text: other (sweetener)

characteristic: INSDC first public

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FDA

text: India

text: organic stevia cut and sifted steam treated

text: Salmonella enterica

characteristic: organism

text: GenomeTrakr

text: food

characteristic: strain

characteristic: title


text: other (sweetener)

characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA

characteristic: collected by

characteristic: collection date

characteristic: fda lab id

text: India

characteristic: geo loc name

text: stevia sweetener

text: Salmonella enterica

text: GenomeTrakr

text: food


text: seeded vegetables (legumes)| sprouts| seeds

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA

text: USA:MD

text: alfalfa sprout seed

characteristic: isolation source

text: alfalfa sprout:FOODON_00002670| alfalfa seed:FOODON_03305556

characteristic: ontological term

text: Salmonella enterica

text: GenomeTrakr

characteristic: project name

text: United States Food and Drug Administration|Office of Regulatory Affairs|Southeast Food and Feed Laboratory

characteristic: sequenced by

text: food


characteristic: External Id

text: crustaceans

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: FDA

text: Thailand

text: fresh water prawn

text: fresh water:ENVO_00002011|shrimp:FOODON_03411237

text: Salmonella enterica

text: GenomeTrakr

text: food

characteristic: source type

text: Pathogen: environmental/food/other sample from Salmonella enterica


text: environmental

characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: SRA accession

text: FDA

text: USA:MD

text: environmental swab

text: environmental (swab or sampling):GENEPIO_0001732

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

text: environmental

characteristic: strain

text: Pathogen: environmental/food/other sample from Listeria monocytogenes

characteristic: title


text: multi-ingredient

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

text: environmental/food/other

text: Florida Department of Agriculture and Consumer Services

characteristic: collected by

characteristic: collection date

text: USA:FL

characteristic: geo loc name

text: cuban sandwich

text: cuban:ANCESTRO_0405|sandwich:FOODON_03301906

text: Listeria monocytogenes

characteristic: pfge primary enzyme pattern

text: food


characteristic: External Id

text: multi-ingredient| fish

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: USA:FL

text: tuna sandwich

characteristic: isolation source

text: tuna:FOODON_03411269|sandwich:FOODON_03301906

characteristic: ontological term

text: Listeria monocytogenes

text: food


text: multi-ingredient

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: USA:FL

text: midnight sandwich

text: Listeria monocytogenes

text: food

characteristic: source type


text: multi-ingredient| pork

characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: USA:FL

text: ham sandwich

text: ham sandwich:FOODON_03307807

text: Listeria monocytogenes

characteristic: organism

text: food


text: multi-ingredient| crustaceans

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

text: environmental/food/other

text: USA:FL

text: cajun style shrimp spread

text: shrimp:FOODON_03411237| food spread:FOODON_00001873

text: Listeria monocytogenes

text: food

characteristic: strain

characteristic: title


text: multi-ingredient| poultry

text: live

text: Pathogen.env

text: environmental/food/other

characteristic: collected by

characteristic: collection date

text: USA:FL

characteristic: geo loc name

text: chicken salad

text: chicken salad:foodon_03306092

text: Listeria monocytogenes

characteristic: pfge primary enzyme pattern

text: food


characteristic: External Id

text: multi-ingredient| chicken| fruits| nuts

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: USA:FL

text: chicken salad with fruit and nut

characteristic: isolation source

text: chicken salad:FOODON_03306092| fruit salad:FOODON_03305148| nut fruit:po_0030102

characteristic: ontological term

text: Listeria monocytogenes

text: food


text: multi-ingredient| eggs| pork

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: USA:FL

text: ham omelette sandwich

text: ham sandwich:FOODON_03307807| omelette:FOODON_00003252

text: Listeria monocytogenes

text: food

characteristic: source type


text: multi-ingredient| chicken

characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: USA:FL

text: chicken wrap

text: chicken:FOODON_03411457| flatbread wrap:FOODON_00002941

text: Listeria monocytogenes

characteristic: organism

text: food


text: multi-ingredient| pork

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

text: environmental/food/other

text: USA:FL

text: ham salad

text: ham salad:FOODON_03306091

text: Listeria monocytogenes

text: food

characteristic: strain

characteristic: title


text: poultry

text: live

text: Pathogen.env

text: environmental/food/other

characteristic: collected by

characteristic: collection date

text: USA:FL

characteristic: geo loc name

text: turkey breast

text: turkey breast:foodon_00002690

text: Listeria monocytogenes

characteristic: pfge primary enzyme pattern

text: food


characteristic: External Id

text: multi-ingredient| crustaceans

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: USA:FL

text: shrimp spread

characteristic: isolation source

characteristic: ontological term

text: Listeria monocytogenes

text: food


text: dairy

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: USA:FL

text: raw milk

text: cow milk (raw):foodon_03307455

text: Listeria monocytogenes

text: food

characteristic: source type


text: dairy

characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: USA:FL

text: raw cream

text: cream (raw):FOODON_03310908

text: Listeria monocytogenes

characteristic: organism

text: food


text: multi-ingredient| cow| pork

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

text: environmental/food/other

text: USA:FL

text: ham sausage veal

text: ham food product:FOODON_00002502| sausage formed:FOODON_03315904| veal:FOODON_00003083

text: Listeria monocytogenes

text: food

characteristic: strain

characteristic: title


text: environmental

text: live

text: Pathogen.env

text: environmental/food/other

characteristic: collected by

characteristic: collection date

text: USA:FL

characteristic: geo loc name

text: environmental swab

text: Listeria monocytogenes

characteristic: pfge primary enzyme pattern

text: food


characteristic: External Id

text: multi-ingredient| pork

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: USA:FL

text: ham spread

characteristic: isolation source

text: ham food product:FOODON_00002502| food spread:FOODON_00001873

characteristic: ontological term

text: Listeria monocytogenes

text: food


text: fish

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: USA:FL

text: whole whitefish

text: whole:foodon_03430131| whitefish:foodon_03312064

text: Listeria monocytogenes

text: food

characteristic: source type


text: dairy

characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: USA:FL

text: raw buttermilk

text: food (raw):FOODON_03311126|buttermilk food product:FOODON_00001067

text: Listeria monocytogenes

characteristic: organism

text: food


text: multi-ingredient| pork

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

text: environmental/food/other

text: USA:FL

text: deli meat ham

text: luncheon meat:FOODON_03310675| ham food product:FOODON_00002502

text: Listeria monocytogenes

text: food

characteristic: strain

characteristic: title


text: environmental-factory/production facility

text: FDA Center for Food Safety and Applied Nutrition

text: live

text: Pathogen.env

text: environmental/food/other

characteristic: collected by

characteristic: collection date

text: USA:FL

characteristic: geo loc name

text: environmental swab sponge

text: environmental (swab or sampling):genepio_0001732

text: Listeria monocytogenes

characteristic: pfge primary enzyme pattern

text: environmental


characteristic: External Id

text: environmental

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: USA:FL

text: environmental swab

characteristic: isolation source

characteristic: ontological term

text: Listeria monocytogenes

text: environmental


text: multi-ingredient| chicken| grains

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: USA:FL

text: chicken pasta salad

text: chicken salad:FOODON_03306092| pasta:FOODON_03306347

text: Listeria monocytogenes

text: food

characteristic: source type


text: multi-ingredient| turkey

characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: USA:FL

text: turkey sandwich

text: turkey sandwich:FOODON_03310573

text: Listeria monocytogenes

characteristic: organism

text: food

text: Pathogen: environmental/food/other sample from Listeria monocytogenes


text: fish

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

text: environmental/food/other

text: Florida Department of Agriculture and Consumer Services

text: USA:FL

text: smoked nova salmon

text: salmon smoked:FOODON_03301805

text: Listeria monocytogenes

text: food

characteristic: strain

characteristic: title


text: fish

text: live

text: Pathogen.env

text: environmental/food/other

characteristic: collected by

characteristic: collection date

text: USA:FL

characteristic: geo loc name

text: smoked salmon

text: salmon (smoked):foodon_03301805

text: Listeria monocytogenes

characteristic: pfge primary enzyme pattern

text: food


characteristic: External Id

text: poultry

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: USA:FL

text: hickory turkey breast

characteristic: isolation source

text: turkey breast:foodon_00002690

characteristic: ontological term

text: Listeria monocytogenes

text: food


text: multi-ingredient

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: USA:FL

text: american sandwich

text: american:HANCESTRO_0463|sandwich:FOODON_03301906

text: Listeria monocytogenes

text: food

characteristic: source type


text: dairy

characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: USA:FL

text: cheese

text: cheese food product:foodon_00001013

text: Listeria monocytogenes

characteristic: organism

text: food


text: multi-ingredient

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

text: environmental/food/other

text: USA:FL

text: antipasta salad

text: Listeria monocytogenes

text: food

characteristic: strain

characteristic: title


text: multi-ingredient| beef

text: live

text: Pathogen.env

text: environmental/food/other

characteristic: collected by

characteristic: collection date

text: USA:FL

characteristic: geo loc name

text: roast beef sandwich

text: roast beef:FOODON_00002734| sandwich:FOODON_03301906

text: Listeria monocytogenes

characteristic: pfge primary enzyme pattern

text: food


characteristic: External Id

text: fish

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: USA:FL

text: smoked round salmon

characteristic: isolation source

text: salmon (smoked):FOODON_03301805

characteristic: ontological term

text: Listeria monocytogenes

text: food


text: fish

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: USA:FL

text: smoked sockeye salmon

text: salmon smoked:FOODON_03301805|sockeye salmon:FOODON_03411128

text: Listeria monocytogenes

text: food

characteristic: source type


text: multi-ingredient| poultry

characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: USA:FL

text: chicken salad

text: chicken salad:foodon_03306092

text: Listeria monocytogenes

characteristic: organism

text: food


text: vegetables

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

text: environmental/food/other

text: USA:FL

text: coleslaw

text: coleslaw (food product):FOODON_03304707

text: Listeria monocytogenes

text: food

characteristic: strain

characteristic: title


text: multi-ingredient

text: live

text: Pathogen.env

text: environmental/food/other

characteristic: collected by

characteristic: collection date

text: USA:FL

characteristic: geo loc name

text: italian hero sub sandwich

text: hero sandwich:foodon_03309508| italian:ancestro_0307

text: Listeria monocytogenes

characteristic: pfge primary enzyme pattern

text: food


characteristic: External Id

text: pork

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: USA:FL

text: black forest ham

characteristic: isolation source

text: ham food product:foodon_00002502

characteristic: ontological term

text: Listeria monocytogenes

text: food


text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: USA:FL

text: environmental swab sponge

text: Listeria monocytogenes

text: environmental

characteristic: source type


characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: SRA accession

text: USA:FL

text: environmental swab sponge

text: environmental (swab or sampling):GENEPIO_0001732| environmental sponge:CURATION_0000359

text: Listeria monocytogenes

characteristic: organism

text: environmental


text: multi-ingredient| dairy| pork

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

text: environmental/food/other

text: USA:FL

text: ham cheese sandwich

text: ham sandwich:FOODON_03307807|cheese sandwich:FOODON_03312036

text: Listeria monocytogenes

text: food

characteristic: strain

characteristic: title


text: multi-ingredient| eggs

text: live

text: Pathogen.env

text: environmental/food/other

characteristic: collected by

characteristic: collection date

text: USA:FL

characteristic: geo loc name

text: egg salad

text: egg food product:FOODON_00001274| salad:FOODON_03316042

text: Listeria monocytogenes

characteristic: pfge primary enzyme pattern

text: food


characteristic: External Id

text: multi-ingredient| root/underground (tubers)

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: USA:FL

text: potato salad

characteristic: isolation source

text: potato salad:FOODON_03304708

characteristic: ontological term

text: Listeria monocytogenes

text: food


text: multi-ingredient| chicken

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: USA:FL

text: rotissierie chicken salad

text: chicken salad:FOODON_03306092

text: Listeria monocytogenes

text: food

characteristic: source type


text: multi-ingredient| pork| turkey

characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: USA:FL

text: turkey ham sandwich

text: turkey ham:FOODON_03310971| turkey sandwich:FOODON_03310573

text: Listeria monocytogenes

characteristic: organism

text: food


text: fish

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

text: environmental/food/other

text: USA:FL

text: smoked salmon

text: salmon (smoked):foodon_03301805

text: Listeria monocytogenes

text: food

characteristic: strain

characteristic: title


text: fish

text: live

text: Pathogen.env

text: environmental/food/other

characteristic: collected by

characteristic: collection date

text: USA:FL

characteristic: geo loc name

text: smoked salmon

text: salmon (smoked):foodon_03301805

text: Listeria monocytogenes

text: environmental/food/other

characteristic: package

characteristic: pfge primary enzyme pattern

text: food


characteristic: External Id

text: multi-ingredient

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: USA:FL

text: cuban sandwich

characteristic: isolation source

text: cuban:ANCESTRO_0405|sandwich:FOODON_03301906

characteristic: ontological term

text: Listeria monocytogenes

text: environmental/food/other

text: food


text: multi-ingredient| fish

characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: USA:FL

text: tuna salad sandwich

text: tuna salad sandwich:FOODON_03307771

text: Listeria monocytogenes

text: environmental/food/other

text: food

characteristic: source type


text: multi-ingredient| poultry

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: USA:FL

text: chicken salad sandwich

text: chicken salad:foodon_03306092| sandwich:foodon_03301906

text: Listeria monocytogenes

characteristic: organism

text: environmental/food/other

text: food

characteristic: strain


text: multi-ingedient| dairy

text: live

text: Pathogen.env

text: environmental/food/other

characteristic: collected by

characteristic: collection date

text: USA:FL

characteristic: geo loc name

text: fresh cheese curd

text: cheese curd:foodon_03310352| food (fresh):foodon_00002457

text: Listeria monocytogenes

text: environmental/food/other

characteristic: package

text: food

characteristic: title


characteristic: External Id

text: dairy

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: USA:FL

text: cheese

characteristic: isolation source

text: cheese food product:foodon_00001013

text: Listeria monocytogenes

text: environmental/food/other

characteristic: pfge primary enzyme pattern

text: food


text: pork

characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: USA:FL

text: deli ham

text: ham food product:FOODON_00002502

characteristic: ontological term

text: Listeria monocytogenes

text: environmental/food/other

text: food


text: fish

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: USA:FL

text: fish

text: Listeria monocytogenes

characteristic: organism

text: environmental/food/other

text: food

characteristic: source type


text: environmental

text: live

text: Pathogen.env

text: environmental/food/other

characteristic: collected by

characteristic: collection date

text: USA:FL

characteristic: geo loc name

text: environmental swab

text: environmental (swab or sampling):genepio_0001732

text: Listeria monocytogenes

text: environmental

characteristic: strain


characteristic: External Id

text: fish

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: USA:FL

text: smoked white fish

text: fish smoked:FOODON_03301318|whitefish fisheries term:FOODON_00003281

text: Listeria monocytogenes

text: environmental/food/other

characteristic: package

text: food

characteristic: title


text: pork

characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: USA:FL

text: sliced ham

characteristic: isolation source

text: sliced:FOODON_03430137|ham food product:FOODON_00002502

text: Listeria monocytogenes

text: environmental/food/other

characteristic: pfge primary enzyme pattern

text: food

text: Pathogen: environmental/food/other sample from Listeria monocytogenes


text: multi-ingredient| crustaceans

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: Florida Department of Agriculture and Consumer Services

text: USA:FL

text: shrimp salad

text: shrimp salad:FOODON_03307787

characteristic: ontological term

text: Listeria monocytogenes

text: environmental/food/other

text: food


text: multi-ingredient| pork

text: live

text: Pathogen.env

text: environmental/food/other

characteristic: collected by

characteristic: collection date

text: USA:FL

characteristic: geo loc name

text: macaroni ham salad

text: macaroni salad:FOODON_03304693| ham salad:FOODON_03306091

text: Listeria monocytogenes

characteristic: organism

text: environmental/food/other

text: food

characteristic: source type


characteristic: External Id

text: multi-ingredient

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: USA:FL

text: green salad

text: Listeria monocytogenes

text: environmental/food/other

characteristic: package

text: food

characteristic: strain


text: multi-ingredient

characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: USA:FL

text: bocala salad

characteristic: isolation source

text: Listeria monocytogenes

text: environmental/food/other

text: food

characteristic: title


text: multi-ingredient| sub-tropical fruit

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: USA:FL

text: avocado salad

text: avocado (whole| raw):FOODON_03305236| salad:FOODON_03316042

text: Listeria monocytogenes

text: environmental/food/other

characteristic: pfge primary enzyme pattern

text: food


text: multi-ingredient| fish

text: live

text: Pathogen.env

text: environmental/food/other

characteristic: collected by

characteristic: collection date

text: USA:FL

characteristic: geo loc name

text: tuna salad

text: tuna salad:FOODON_03308735

characteristic: ontological term

text: Listeria monocytogenes

characteristic: organism

text: environmental/food/other

text: food


characteristic: External Id

text: beef

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: USA:FL

text: deli roast beef

text: roast beef:FOODON_00002734

text: Listeria monocytogenes

text: environmental/food/other

characteristic: package

text: food

characteristic: source type


text: turkey

characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: USA:FL

text: deli turkey

characteristic: isolation source

text: luncheon meat:FOODON_03310675|domestic turkey:FOODON_03414166

text: Listeria monocytogenes

text: environmental/food/other

text: food

characteristic: strain


MHOMSpr

text: University of Missouri - Columbia

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: ATCC 33131

characteristic: biomaterial provider

text: Geoffrey Furness

characteristic: culture collection

text: Mycoplasma hominis strain Sprott, isolated from urethral discharge of patient with non-gonococcal urethritis.

characteristic: description

text: USA: New Jersey

text: Homo sapiens

characteristic: host

text: Metamycoplasma hominis

text: whole organism

characteristic: sample type

text: Sprott

text: Microbe sample from Metamycoplasma hominis

characteristic: title


characteristic: External Id

text: clinical/research| human

text: FDA/CFSAN/MDH

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: SRA accession

text: Public Health Agency of Canada

characteristic: collected by

characteristic: collection date

text: Canada

characteristic: geo loc name

text: Homo sapiens

characteristic: ontological term

text: Escherichia coli

characteristic: organism

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

characteristic: serovar

text: human

text: Pathogen: clinical or host-associated sample from Escherichia coli


text: environmental-water

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: FLUFL

text: USA:FL

text: Suwannee river water

characteristic: isolation source

text: river water:ENVO_01000599

text: Salmonella enterica

text: environmental

characteristic: source type

characteristic: strain

text: Pathogen: environmental/food/other sample from Salmonella enterica


characteristic: External Id

text: Intercellular Signalling in Cardiovascular Development & Disease, Centro Nacional de Investigaciones Cardiovasculares Carlos III (CNIC).

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: adult

characteristic: delevopmental stage

text: RBPJ KO induced in chd5 domain at 8 weeks old mice

characteristic: genotype

text: Mus musculus

text: aortic arches

text: aorta

characteristic: tissue

text: RBPJko2 ApoE-/-; RBPJflox/flox;Cdh5-CreERTmice

characteristic: title


text: live

text: Generic

text: adult

text: ApoE mice

text: Mus musculus

characteristic: organism

text: aortic arches

text: aorta

text: RBPwt1 ApoE-/-;RBPJflox/flox


characteristic: INSDC center name

text: live

text: Generic

text: adult

text: ApoE mice

text: Mus musculus

text: aortic arches

text: aorta

text: RBPwt2 ApoE-/-;RBPJflox/flox


characteristic: INSDC last update

text: live

text: Generic

text: adult

text: ApoE mice

text: Mus musculus

text: aortic arches

text: aorta

text: RBPwt3 ApoE-/-;RBPJflox/flox


text: live

characteristic: INSDC status

text: Generic

text: adult

text: Mus musculus

text: aortic arches

text: aorta

text: RBPJko1 ApoE-/-; RBPJflox/flox;Cdh5-CreERTmice


text: live

text: Generic

characteristic: NCBI submission model

text: adult

text: Mus musculus

text: aortic arches

text: aorta

text: RBPJko3 ApoE-/-; RBPJflox/flox;Cdh5-CreERTmice


text: Biochemistry, University of Vermont

text: live

text: Generic

characteristic: NCBI submission package

text: fibrocystic disease; ATCC CRL-10317

characteristic: atcc id

characteristic: cell line

text: mammary gland/breast epithelial cell

characteristic: cell type

text: luminal ductal cells

characteristic: neoplasia type

text: Homo sapiens


characteristic: External Id

text: University of Queensland

characteristic: INSDC first public

text: live

text: Pathogen.cl

text: Royal Children's Hospital, Brisbane

characteristic: collected by

characteristic: collection date

text: Australia: Brisbane

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: Cystic fibrosis

characteristic: host disease

text: lungs of cystic fibrosis patient C

characteristic: isolation source

text: 27.4667 S 153.0333 E

characteristic: lat lon

text: Stutzerimonas stutzeri

characteristic: strain

text: Pathogen: clinical or host-associated sample from Stutzerimonas stutzeri


text: Public Health Agency of Canada

characteristic: INSDC center name

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: SRA accession

text: Daniel Leclair

text: Canada: Kuujjuaq (Ungava Bay), Wuebec

text: Shoreline Soil

text: Clostridium botulinum

characteristic: organism

text: Monovalent E

characteristic: serotype

characteristic: serovar

text: Group II (non-proteolytic)

characteristic: subtype

text: Pathogen: environmental/food/other sample from Clostridium botulinum

characteristic: title


characteristic: External Id

text: IMBB-FORTH

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: cell line

text: Homo sapiens

text: breast adenocarcinoma

characteristic: tissue