text: Environmental | Terrestrial | Deep subsurface | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California, McLaughlin Reserve, Coast Range Ophiolite (CRO)

text: 38.8739528 N 122.4391613 W

text: subsurface metagenome

text: Serpentinite rock and fluid subsurface biosphere microbial communities from McLaughlin Reserve, California, USA - CR11Aug_CSWold


status: PUBLIC

tag: Namespace:DOE Joint Genome Institute

characteristic: External Id

tag: attribute

characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: SRA accession

characteristic: collection date

characteristic: geo loc name

text: 38.8739528 N 122.4391613 W

characteristic: lat lon

text: subsurface metagenome

characteristic: organism

text: Serpentinite rock and fluid subsurface biosphere microbial communities from McLaughlin Reserve, California, USA - CR12Mar_CSW14AB

characteristic: title


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: 38.8739528 N 122.4391613 W

text: subsurface metagenome

text: Serpentinite rock and fluid subsurface biosphere microbial communities from McLaughlin Reserve, California, USA - CR12Aug_CSW11AC


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: 38.8739528 N 122.4391613 W

text: subsurface metagenome

text: Serpentinite rock and fluid subsurface biosphere microbial communities from McLaughlin Reserve, California, USA - CR12Aug_CSW13A


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: 38.8739528 N 122.4391613 W

text: subsurface metagenome

text: Serpentinite rock and fluid subsurface biosphere microbial communities from McLaughlin Reserve, California, USA - CR12Aug_1A


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: 38.8739528 N 122.4391613 W

text: subsurface metagenome

text: Serpentinite rock and fluid subsurface biosphere microbial communities from McLaughlin Reserve, California, USA - CR12Aug_5A


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: 38.8739528 N 122.4391613 W

text: subsurface metagenome

text: Serpentinite rock and fluid subsurface biosphere microbial communities from McLaughlin Reserve, California, USA - CR12Aug_8Ca


text: Environmental | Terrestrial | Soil | Soil crust | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Colorado Plateau

text: Soil crust

characteristic: isolation source

text: 38.42 N 109.4099 W

text: soil metagenome

text: Soil microbial communities from Colorado Plateau, USA - Soil Crust after wet up 1B


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Colorado Plateau

text: Soil crust

text: 38.42 N 109.4099 W

text: soil metagenome

text: Soil microbial communities from Colorado Plateau, USA - Soil Crust after wet up 1C


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Colorado Plateau

text: Soil crust

text: 38.42 N 109.4099 W

text: soil metagenome

text: Soil microbial communities from Colorado Plateau, USA - Soil Crust after wet up 4A


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: 38.8739528 N 122.4391613 W

text: subsurface metagenome

text: Serpentinite rock and fluid subsurface biosphere microbial communities from McLaughlin Reserve, California, USA - N08B_MAR13


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: 38.8739528 N 122.4391613 W

text: subsurface metagenome

text: Serpentinite rock and fluid subsurface biosphere microbial communities from McLaughlin Reserve, California, USA - N08B_AUG13


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: 38.8739528 N 122.4391613 W

text: subsurface metagenome

text: Serpentinite rock and fluid subsurface biosphere microbial communities from McLaughlin Reserve, California, USA - QV1.2_AUG13


text: Environmental | Aquatic | Marine | Oceanic | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Atlantic Ocean:South Atlantic Ocean

text: marine water

text: 17.283 S 2.9768 E

text: marine metagenome

text: Metatranscriptome of marine eukaryotic phytoplankton communities from South Atlantic Ocean - 30m ANT-15 Euk ARK-20-1


text: Host-associated | Annelida | Digestive system | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Germany: Marburg

text: 50.8 N 8.81 E

text: annelid metagenome

text: Worm MetaG Olavius vacuus BAHAMAS.1


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Germany: Marburg

text: 50.8 N 8.81 E

text: annelid metagenome

text: Marine gutless worms symbiont microbial communities from Max Planck institute for Marine Microbiology, Germany - Olavius tantulus BELIZE.1


text: Chicago Botanic Garden

text: live

text: Microbe, viral or environmental

text: USA: Missouri, Bull Shoals Lake

characteristic: isolate

text: Discostella pseudostelligera

text: cell culture

characteristic: sample type

text: Microbe sample from Discostella pseudostelligera


characteristic: External Id

text: live

text: Generic

text: Azospirillum brasilense

text: Cyst

text: Sp 7

characteristic: strain

text: Cyst biol. rep. 3

text: type strain of Azospirillum brasilense

characteristic: type-material


characteristic: INSDC first public

text: live

text: Generic

text: Azospirillum brasilense

text: Cyst

text: Sp 7

text: Cyst biol. rep. 2

text: type strain of Azospirillum brasilense


characteristic: INSDC last update

text: live

text: Generic

text: Azospirillum brasilense

text: Cyst

text: Sp 7

text: Cyst biol. rep. 1

text: type strain of Azospirillum brasilense


characteristic: INSDC secondary accession

text: live

text: Generic

text: Azospirillum brasilense

text: Vegetative

text: Sp 7

text: Vegetative biol. rep. 3

text: type strain of Azospirillum brasilense


text: live

characteristic: INSDC status

text: Generic

text: Azospirillum brasilense

text: Vegetative

text: Sp 7

text: Vegetative biol. rep. 2

text: type strain of Azospirillum brasilense


text: live

text: Generic

characteristic: NCBI submission model

text: Azospirillum brasilense

text: Vegetative

text: Sp 7

text: Vegetative biol. rep. 1

text: type strain of Azospirillum brasilense


text: Environmental | Aquatic | Marine | Intertidal zone | Sediment

characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

characteristic: INSDC center name

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: USA:Santa Barbara Basin

text: Santa Barbara Basin

text: 33.7295655 N 119.7355456 W

text: marine sediment metagenome

text: ANME-1 pyrotags


text: nankai university

text: live

text: Generic

characteristic: SRA accession

text: wild type

characteristic: genotype

text: Mus musculus

text: mouse embryonic stem cell

text: WT


text: nankai university

text: live

text: Generic

text: Hbxip-/-

text: Mus musculus

characteristic: organism

text: mouse embryonic stem cell

characteristic: title


text: nankai university

text: live

text: Generic

text: wild type

text: Mus musculus

text: mouse embryonic stem cell


text: University of New Hampshire

text: live

text: Invertebrate

characteristic: collection date

text: Japan

characteristic: geo loc name

characteristic: specimen voucher

text: brain

characteristic: tissue

text: Invertebrate sample from Ceratina japonica


characteristic: External Id

text: University of New Hampshire

text: live

text: Invertebrate

text: Japan

text: Ceratina japonica

text: brain


text: environmental

characteristic: IFSAC+ Category

text: FDA

characteristic: INSDC first public

text: live

text: environmental/food/other

text: FDA

characteristic: collected by

characteristic: fda lab id

text: USA:FL

characteristic: isolate

text: environmental swab

characteristic: isolation source

text: environmental (swab or sampling):genepio_0001732

characteristic: ontological term

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: project name

text: United States Food and Drug Administration|Office of Regulatory Affairs|Southeast Food and Feed Laboratory

characteristic: sequenced by

text: environmental

characteristic: source type

characteristic: strain

text: Pathogen: environmental/food/other sample from Listeria monocytogenes


text: Thomas Jefferson University

characteristic: INSDC center name

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

characteristic: cell line

text: ovarian cancer cell line

characteristic: cell type

text: Non-targeting control

characteristic: genotype/variation

text: Homo sapiens

characteristic: organism

text: SKOV3 ovarian cancer cell line

characteristic: title


characteristic: External Id

text: Thomas Jefferson University

characteristic: INSDC first public

text: live

text: Generic

text: ovarian cancer cell line

text: DNM3OS knockdown

text: Homo sapiens

text: SKOV3 ovarian cancer cell line


text: Host-associated | Plants | Roots | Rhizosphere | Unclassified

characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: collection date

text: USA: University of North Carolina, Chapel Hill

characteristic: geo loc name

text: University of North Carolina, USA

characteristic: isolation source

text: 35.9082 N 79.0499 W

characteristic: lat lon

text: rhizosphere metagenome

text: Arabidopsis rhizosphere microbial communities from the University of North Carolina, USA - metaT NBMF1_06_lowP_mix1_d1


text: veterinary clinical/research| other animal

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC center name

characteristic: INSDC last update

text: live

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: Translational Genomics Research Institute

characteristic: collected by

text: Escherichia

characteristic: genus

text: USA:AZ

text: stool (Odocoileus virginianus)

text: feces:UBERON_0001988, odocoileus virginianus:NCBITAXON_9874

characteristic: ontological term

text: Escherichia coli

text: animal

characteristic: source type

text: coli

characteristic: species

characteristic: strain

text: Pathogen: environmental/food/other sample from Escherichia coli


characteristic: External Id

text: veterinary clinical/research| cow

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: OADDL - OK

text: Salmonella

text: USA:OK

text: feces (Bos taurus)

text: bos taurus:NCBITAXON_9913, feces:UBERON_0001988

text: Salmonella enterica

characteristic: organism

text: animal

text: enterica

text: Pathogen: environmental/food/other sample from Salmonella enterica

characteristic: title


text: veterinary clinical/research| companion animal

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC last update

text: live

characteristic: ProjectAccession

text: environmental/food/other

text: Michigan State University VDL

characteristic: collection date

text: Escherichia

text: USA:MI

characteristic: geo loc name

text: bladder (Canis lupus familiaris)

characteristic: isolation source

text: bladder:CURATION_0000504| canis lupus familiaris:NCBITAXON_9615

text: Escherichia coli

text: animal

text: coli


text: live

characteristic: PublicAccession

text: environmental/food/other

text: North Carolina

characteristic: collected by

text: Escherichia

characteristic: genus

text: USA:NC

text: urine (Canis lupus familaris)

text: canis lupus familiaris:NCBITAXON_9615, urine:UBERON_0001088

characteristic: ontological term

text: Escherichia coli

text: animal

characteristic: source type

text: coli

characteristic: species

characteristic: strain


characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

characteristic: SRA accession

text: environmental/food/other

text: North Carolina

text: Salmonella

text: USA:NC

text: colon (Equus caballus)

text: colon:UBERON_0001155, equus caballus:NCBITAXON_9796

text: Salmonella enterica

text: animal

text: enterica


characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: environmental/food/other

text: ISUVDL

text: Escherichia

text: USA:IA

text: biological fluid and or tissue (Canis lupus familiaris)

text: biological fluid:CURATION_0001460| canis lupus familiaris:NCBITAXON_9615| interstitial fluid:UBERON_0000913

text: Escherichia coli

characteristic: organism

text: animal

text: coli

characteristic: title


text: live

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: OADDL - OK

characteristic: collection date

text: Salmonella

text: USA:OK

characteristic: geo loc name

text: feces (Equus caballus)

characteristic: isolation source

text: equus caballus:NCBITAXON_9796, feces:UBERON_0001988

text: Salmonella enterica

text: animal

text: enterica


text: live

text: environmental/food/other

text: Michigan State University VDL

characteristic: collected by

text: Salmonella

characteristic: genus

text: USA:MI

text: lung (Lama glama)

text: lama glama:NCBITAXON_9844, lung:UBERON_0002048

characteristic: ontological term

text: Salmonella enterica

text: animal

characteristic: source type

text: enterica

characteristic: species


characteristic: External Id

text: crustaceans

characteristic: IFSAC Category

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Maryland Department of Health

text: Vibrio

text: USA:MD

text: crab

text: Vibrio parahaemolyticus

text: food

text: parahaemolyticus

characteristic: strain

text: Pathogen: environmental/food/other sample from Vibrio parahaemolyticus


characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: ProjectAccession

characteristic: SRA accession

text: environmental/food/other

text: Michigan State University VDL

text: Staphylococcus

text: USA:MI

text: skin (Canis lupus familiaris)

text: canis lupus familiaris:NCBITAXON_9615, zone of skin:UBERON_0000014

text: Staphylococcus pseudintermedius

characteristic: organism

text: animal

text: pseudintermedius

text: Pathogen: environmental/food/other sample from Staphylococcus pseudintermedius

characteristic: title


name: Novel Campylobacter species MIT 10-5678 Finch

text: MIT

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: USA

characteristic: geo loc name

text: Taeniopygia guttata

characteristic: host

text: feces

characteristic: isolation source

text: Campylobacter taeniopygiae

text: tissue sample

characteristic: sample type

text: Microbe sample from Campylobacter taeniopygiae

text: type strain of Campylobacter taeniopygiae

characteristic: type material


characteristic: External Id

text: Wang lab, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: MIG1 deletion strain

characteristic: genotype

text: Saccharomyces cerevisiae

text: Early-log phase cells grown on YP medium containing 200 g/l glucose at 40ºC

text: ScY01a (mig1-delta)


characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission package

text: wild type strain

text: Saccharomyces cerevisiae

characteristic: strain


characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: RIC1 deletion strain

text: Saccharomyces cerevisiae

characteristic: organism

text: ScY01a (ric1-delta)


text: live

text: Generic

text: SRB2 deletion strain

text: Saccharomyces cerevisiae

text: ScY01a (srb2-delta)

characteristic: title


text: live

text: Generic

text: SIN3 deletion strain

text: Saccharomyces cerevisiae

text: ScY01a (sin3-delta)


text: animal feed

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

text: live

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: FDA Contracted Laboratory

characteristic: collection date

text: Salmonella

characteristic: genus

text: USA:CA

characteristic: geo loc name

text: meat feed

text: meat food product:foodon_00001006, food product for animal:foodon_03309997

characteristic: ontological term

text: Salmonella enterica

text: environmental

characteristic: source type

text: enterica

characteristic: species


characteristic: External Id

text: environmental

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:SC

text: environmental swab

characteristic: isolation source

text: environmental (swab or sampling):GENEPIO_0001732

text: Salmonella enterica

text: environmental

text: enterica

text: Pathogen: environmental/food/other sample from Salmonella enterica


text: chicken

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:IN

text: finished ground chicken

text: Salmonella enterica

text: food

text: enterica

characteristic: strain


text: vegetable row crops (leafy)

characteristic: IFSAC+ Category

text: live

characteristic: ProjectAccession

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:AZ

text: organic spinach

text: spinach (whole, raw):FOODON_03301716

text: Salmonella enterica

characteristic: organism

text: food

text: enterica

characteristic: title


text: environmental

text: live

characteristic: PublicAccession

text: environmental/food/other

text: FDA Contracted Laboratory

characteristic: collection date

text: Salmonella

characteristic: genus

text: USA:CA

characteristic: geo loc name

text: environmental swab

text: Salmonella enterica

text: environmental

text: enterica


characteristic: External Id

text: chicken

text: live

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:IN

text: ground component chicken

text: chicken ground or minced:FOODON_03311826

characteristic: ontological term

text: Salmonella enterica

text: food

characteristic: source type

text: enterica

characteristic: species


text: environmental

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:IL

text: environmental swab

characteristic: isolation source

text: Salmonella enterica

text: environmental

text: enterica


text: environmental-factory/production facility

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:IL

text: environmental swab sponge

text: Salmonella enterica

text: environmental

text: enterica

characteristic: strain


text: seeded vegetables (legumes)

characteristic: IFSAC+ Category

text: live

characteristic: ProjectAccession

text: environmental/food/other

text: VA

characteristic: collected by

text: Listeria

text: USA:VA

text: frozen pea

text: pea (whole|frozen):FOODON_03306808

text: Listeria monocytogenes

characteristic: organism

text: food

text: monocytogenes

text: Pathogen: environmental/food/other sample from Listeria monocytogenes

characteristic: title


characteristic: External Id

text: multi-ingredient

text: live

characteristic: PublicAccession

text: environmental/food/other

text: FDA Contracted Laboratory

characteristic: collection date

text: Salmonella

characteristic: genus

text: USA:AZ

characteristic: geo loc name

text: raw product

text: food (raw):FOODON_03311126

text: Salmonella enterica

text: food

text: enterica


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:NC

text: environmental swab sponge

text: Salmonella enterica

text: environmental

characteristic: source type

text: enterica

characteristic: species


text: environmental

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:CA

text: finished fertilizer

characteristic: isolation source

text: Salmonella enterica

text: environmental

text: enterica


characteristic: IFSAC+ Category

text: live

characteristic: ProjectAccession

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:CA

text: environmental swab sponge

text: Salmonella enterica

text: environmental

text: enterica

characteristic: strain


characteristic: External Id

text: vegetable row crops (leafy)

text: live

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:CA

text: finished spinach

text: Salmonella enterica

characteristic: organism

text: food

text: enterica

characteristic: title


text: pork

text: live

characteristic: PublicAccession

text: environmental/food/other

text: FDA Contracted Laboratory

characteristic: collection date

text: Salmonella

characteristic: genus

text: USA:NE

text: pork

text: pork meat food product:FOODON_00001038

characteristic: ontological term

text: Salmonella enterica

text: food

text: enterica


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:WA

characteristic: geo loc name

text: environmental swab sponge

text: Salmonella enterica

text: environmental

characteristic: source type

text: enterica


text: chicken

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:IL

text: raw chicken meat

text: chicken (raw):FOODON_03301121|meat (raw):FOODON_03306429

text: Salmonella enterica

text: food

text: enterica

characteristic: species


text: multi-ingredient

characteristic: IFSAC+ Category

text: live

characteristic: ProjectAccession

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:CA

text: finished spring mixture

characteristic: isolation source

text: Salmonella enterica

text: food

text: enterica


characteristic: External Id

text: nuts

text: live

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:CA

text: raw almond

text: almond (whole, raw):FOODON_03301355

text: Salmonella enterica

characteristic: organism

text: food

text: enterica

characteristic: strain

characteristic: title


text: poultry

text: live

characteristic: PublicAccession

text: environmental/food/other

text: FDA Contracted Laboratory

characteristic: collection date

text: Salmonella

characteristic: genus

text: USA:IL

text: raw poultry meat

text: poultry (raw):FOODON_03307064|meat (raw):FOODON_03306429

characteristic: ontological term

text: Salmonella enterica

text: food

text: enterica


text: multi-ingredient

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:AZ

characteristic: geo loc name

text: finished product

text: Salmonella enterica

text: food

characteristic: source type

text: enterica


text: environmental

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:SC

text: environmental swab

text: Salmonella enterica

text: environmental

text: enterica

characteristic: species


text: chicken

characteristic: IFSAC+ Category

text: live

characteristic: ProjectAccession

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:IN

text: ground component chicken

characteristic: isolation source

text: Salmonella enterica

text: food

text: enterica


characteristic: External Id

text: environmental

text: live

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:IL

text: environmental swab

text: Salmonella enterica

characteristic: organism

text: environmental

text: enterica

characteristic: strain

characteristic: title


text: animal feed

text: live

characteristic: PublicAccession

text: environmental/food/other

text: FDA Contracted Laboratory

characteristic: collection date

text: Salmonella

characteristic: genus

text: USA:IL

text: finished pet food

text: finished product:CURATION_0001404| pet food:FOODON_00002682

characteristic: ontological term

text: Salmonella enterica

text: environmental

text: enterica


text: vegetable row crops (leafy)

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:AZ

characteristic: geo loc name

text: field organic spinach

text: field:ENVO_01000352|spinach (whole, raw):FOODON_03301716

text: Salmonella enterica

text: food

characteristic: source type

text: enterica


text: environmental-water

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:CA

text: rinse water

text: Salmonella enterica

text: animal

text: enterica

characteristic: species


text: fish

characteristic: IFSAC+ Category

text: live

characteristic: ProjectAccession

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:OR

text: tuna

characteristic: isolation source

text: Salmonella enterica

text: food

text: enterica


characteristic: External Id

text: live

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:IL

text: environmental swab sponge

text: Salmonella enterica

characteristic: organism

text: environmental

text: enterica

characteristic: strain

characteristic: title


text: live

characteristic: PublicAccession

text: environmental/food/other

text: FDA Contracted Laboratory

characteristic: collection date

text: Salmonella

characteristic: genus

text: USA:NC

text: environmental swab sponge

text: Salmonella enterica

text: environmental

text: enterica


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:CA

characteristic: geo loc name

text: environmental swab sponge

text: Salmonella enterica

text: environmental

text: enterica


text: chicken

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:IN

text: finished ground chicken

text: Salmonella enterica

text: food

characteristic: source type

text: enterica


text: multi-ingredient

characteristic: IFSAC+ Category

text: live

characteristic: INSDC status

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:AZ

text: raw product

text: food (raw):FOODON_03311126

characteristic: ontological term

text: Salmonella enterica

text: food

text: enterica

characteristic: species


characteristic: External Id

text: live

characteristic: ProjectAccession

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:GA

text: environmental swab sponge

characteristic: isolation source

text: Salmonella enterica

text: environmental

text: enterica


text: vegetable row crops (leafy)

text: live

characteristic: PublicAccession

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:CA

text: finished baby spinach

text: Salmonella enterica

characteristic: organism

text: food

text: enterica

characteristic: strain

characteristic: title


text: nuts

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: environmental/food/other

text: FDA Contracted Laboratory

characteristic: collection date

text: Salmonella

characteristic: genus

text: USA:NC

text: finished peanut butter

text: Salmonella enterica

text: food

text: enterica


text: environmental

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:CA

characteristic: geo loc name

text: fertilizer

text: Salmonella enterica

text: environmental

characteristic: source type

text: enterica


characteristic: IFSAC+ Category

text: live

characteristic: INSDC status

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:WA

text: environmental swab sponge

text: Salmonella enterica

text: environmental

text: enterica

characteristic: species


characteristic: External Id

text: nuts| seeded vegetables (legumes)

text: live

characteristic: ProjectAccession

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:NC

text: peanut butter

text: peanut butter:FOODON_03306867

characteristic: ontological term

text: Salmonella enterica

text: food

text: enterica


text: chicken

text: live

characteristic: PublicAccession

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:IN

text: ground component chicken

characteristic: isolation source

text: Salmonella enterica

characteristic: organism

text: food

text: enterica

characteristic: strain


text: environmental

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: environmental/food/other

text: FDA Contracted Laboratory

characteristic: collection date

text: Salmonella

text: USA:CA

text: environmental swab

text: Salmonella enterica

text: environmental

text: enterica

characteristic: title


text: animal feed

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

characteristic: genus

text: USA:IL

characteristic: geo loc name

text: pet food ingredient

text: pet food:foodon_00002682

text: Salmonella enterica

text: environmental

text: enterica


text: animal feed

characteristic: IFSAC+ Category

text: live

characteristic: INSDC status

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:IL

text: finished pet food

text: Salmonella enterica

text: environmental

characteristic: source type

text: enterica

characteristic: species


characteristic: External Id

text: pome fruit

characteristic: IFSAC Category

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

text: Ohio Department of Agriculture

characteristic: collected by

text: Listeria

text: USA:OH

text: sliced gala apple

text: apple (sliced):FOODON_00002482, gala apple:FOODON_00003348

characteristic: ontological term

text: Listeria monocytogenes

text: food

text: monocytogenes


text: nuts

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

characteristic: collection date

text: Salmonella

text: USA:CA

text: almond

characteristic: isolation source

text: almond (whole, raw):FOODON_03301355

text: Salmonella enterica

characteristic: organism

text: food

text: enterica

characteristic: strain


text: poultry

characteristic: IFSAC+ Category

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

characteristic: genus

text: USA:NE

characteristic: geo loc name

text: poultry

text: poultry meat food product:FOODON_00001131

text: Salmonella enterica

text: food

characteristic: source type

text: enterica

characteristic: title


characteristic: External Id

text: live

characteristic: ProjectAccession

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:AZ

text: environmental swab sponge

text: Salmonella enterica

text: environmental

text: enterica

characteristic: species


text: environmental

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: PublicAccession

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:SC

text: environmental swab

characteristic: ontological term

text: Salmonella enterica

text: environmental

text: enterica


text: animal feed

text: live

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

characteristic: collection date

text: Salmonella

text: USA:IL

text: meat feed

characteristic: isolation source

text: Salmonella enterica

characteristic: organism

text: environmental

text: enterica


text: vegetable row crops (leafy)

characteristic: IFSAC+ Category

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:AZ

text: organic spinach

text: spinach (whole, raw):FOODON_03301716

text: Salmonella enterica

text: food

text: enterica

characteristic: strain


text: chicken

text: live

characteristic: INSDC status

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

characteristic: genus

text: USA:IN

characteristic: geo loc name

text: finished ground chicken

text: Salmonella enterica

text: food

characteristic: source type

text: enterica


characteristic: External Id

text: live

characteristic: ProjectAccession

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:NC

text: environmental swab sponge

text: Salmonella enterica

text: environmental

text: enterica

characteristic: species

characteristic: title


text: nuts

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: PublicAccession

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:CA

text: raw pistachio

text: food (raw):FOODON_03311126|pistachio nut (whole, raw):FOODON_03301825

characteristic: ontological term

text: Salmonella enterica

text: food

text: enterica


text: environmental

text: live

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

characteristic: collection date

text: Salmonella

text: USA:CA

text: fertilizer

characteristic: isolation source

text: Salmonella enterica

characteristic: organism

text: environmental

text: enterica


characteristic: IFSAC+ Category

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:IL

text: environmental swab sponge

text: Salmonella enterica

text: environmental

text: enterica

characteristic: strain


text: live

characteristic: INSDC status

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

characteristic: genus

text: USA:WA

characteristic: geo loc name

text: environmental swab sponge

text: Salmonella enterica

text: environmental

characteristic: source type

text: enterica


characteristic: External Id

text: nuts

text: live

characteristic: ProjectAccession

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:NC

text: finished peanut butter

text: Salmonella enterica

text: food

text: enterica

characteristic: species

characteristic: title


text: fish

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: PublicAccession

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:OR

text: tuna

characteristic: ontological term

text: Salmonella enterica

text: food

text: enterica


text: environmental

text: live

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

characteristic: collection date

text: Salmonella

text: USA:CA

text: environmental swab

characteristic: isolation source

text: Salmonella enterica

characteristic: organism

text: environmental

text: enterica


text: environmental

characteristic: IFSAC+ Category

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: environmental/food/other

text: FDA

characteristic: collected by

characteristic: fda lab id

text: Listeria

text: USA:RI

text: environmental swab

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: project name

text: United States Food and Drug Administration|Office of Regulatory Affairs|Northeast Food and Feed Laboratory

characteristic: sequenced by

text: environmental

text: monocytogenes

characteristic: strain


characteristic: External Id

text: multi-ingredient| seeded vegetables (vine-grown)

text: live

characteristic: INSDC status

characteristic: ProjectAccession

text: environmental/food/other

text: Florida Department of Agriculture and Consumer Services

text: Listeria

characteristic: genus

text: USA:FL

characteristic: geo loc name

text: cucumber salad

text: cucumber (whole| raw):FOODON_03301545| salad:FOODON_03316042

text: Listeria monocytogenes

text: food

characteristic: source type

text: monocytogenes

characteristic: species

characteristic: title


text: multi-ingredient

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

characteristic: collection date

text: Listeria

text: USA:FL

text: macaroni salad

characteristic: isolation source

text: macaroni salad:FOODON_03304693

characteristic: ontological term

text: Listeria monocytogenes

characteristic: organism

text: food

text: monocytogenes


text: multi-ingredient

characteristic: IFSAC+ Category

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: environmental/food/other

characteristic: collected by

text: Listeria

text: USA:FL

text: italian sandwich

text: italian:ANCESTRO_0307|sandwich:FOODON_03301906

text: Listeria monocytogenes

text: food

text: monocytogenes

characteristic: strain


characteristic: External Id

text: chicken

text: live

characteristic: INSDC status

characteristic: ProjectAccession

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

characteristic: genus

text: USA:IN

characteristic: geo loc name

text: ground component chicken

text: Salmonella enterica

text: food

text: enterica

text: Pathogen: environmental/food/other sample from Salmonella enterica


text: multi-ingredient

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: environmental/food/other

text: Listeria

text: USA:FL

text: cuban sandwich

text: cuban:ANCESTRO_0405|sandwich:FOODON_03301906

text: Listeria monocytogenes

text: food

characteristic: source type

text: monocytogenes

characteristic: species

characteristic: title


text: multi-ingredient

text: live

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

characteristic: collection date

text: Listeria

text: USA:FL

text: steak hoagie sandwich

characteristic: isolation source

text: hoagie sandwich:FOODON_03303885

characteristic: ontological term

text: Listeria monocytogenes

text: food

text: monocytogenes


text: multi-ingredient| dairy| grains| meat

characteristic: IFSAC+ Category

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: environmental/food/other

characteristic: collected by

text: Listeria

text: USA:FL

text: egg sausage cheese biscuit

text: egg cheese:FOODON_03316879| sausage formed:FOODON_03315904| scone:FOODON_00002465

text: Listeria monocytogenes

characteristic: organism

text: food

text: monocytogenes


characteristic: External Id

text: environmental

text: live

characteristic: INSDC status

characteristic: ProjectAccession

text: environmental/food/other

text: FDA

characteristic: fda lab id

text: Listeria

characteristic: genus

text: USA:MA

text: environmental swab

text: environmental (swab or sampling):GENEPIO_0001732

text: Listeria monocytogenes

characteristic: pfge primary enzyme pattern

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: environmental

text: monocytogenes

characteristic: strain

text: Pathogen: environmental/food/other sample from Listeria monocytogenes


text: multi-ingredient| root/underground (tubers)

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

characteristic: collection date

text: Listeria

text: USA:FL

characteristic: geo loc name

text: potato salad

text: potato salad:FOODON_03304708

text: Listeria monocytogenes

text: food

characteristic: source type

text: monocytogenes

characteristic: species

characteristic: title


characteristic: External Id

text: multi-ingredient

characteristic: IFSAC+ Category

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

characteristic: collected by

text: Listeria

text: USA:FL

text: cuban sandwich

characteristic: isolation source

characteristic: ontological term

text: Listeria monocytogenes

characteristic: organism

text: food

text: monocytogenes


text: multi-ingredient| poultry

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: ProjectAccession

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: Listeria

characteristic: genus

text: USA:FL

text: chicken caesar wrap

text: chicken:FOODON_03411457|flatbread wrap:FOODON_00002941

text: Listeria monocytogenes

text: food

text: monocytogenes

characteristic: strain


characteristic: External Id

text: multi-ingredient| pork| seeded vegetables (solanaceous)| turkey| vegetable row crops (leafy)

characteristic: IFSAC+ Category

text: live

text: environmental/food/other

characteristic: collection date

text: Listeria

text: USA:FL

characteristic: geo loc name

text: turkey bacon lettuce tomato sandwich

text: turkey sandwich:FOODON_03310573| bacon food product:FOODON_00001061| lettuce vegetable food product:FOODON_00001998| tomato (whole| raw):FOODON_03309927

text: Listeria monocytogenes

text: food

characteristic: source type

text: monocytogenes

characteristic: species

characteristic: title


text: chicken

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:IN

text: ground component chicken

characteristic: isolation source

text: chicken ground or minced:FOODON_03311826

text: Salmonella enterica

text: food

text: enterica


text: clinical/research| human

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: ProjectAccession

characteristic: PublicAccession

text: clinical/host-associated

text: Malbran

characteristic: collected by

text: Escherichia

text: Argentina

text: Homo sapiens

characteristic: host

text: stool

characteristic: ontological term

text: Escherichia coli

characteristic: organism

text: human

text: coli

text: Pathogen: clinical or host-associated sample from Escherichia coli


characteristic: External Id

text: multi-ingredient

characteristic: IFSAC+ Category

text: live

characteristic: SRA accession

text: environmental/food/other

text: Malbran

characteristic: collection date

text: Escherichia

characteristic: genus

text: Argentina

characteristic: geo loc name

text: hamburger

text: beef hamburger (dish):FOODON_00002737

text: Escherichia coli

text: food

characteristic: source type

text: coli

text: ARIMEC331-06 3/8

characteristic: strain

text: Pathogen: environmental/food/other sample from Escherichia coli


text: clinical/research, human

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

text: clinical/host-associated

text: Malbran

text: Escherichia

text: Argentina

text: Homo sapiens

text: stool

characteristic: isolation source

text: Escherichia coli

text: human

text: coli

characteristic: species

characteristic: title


text: environmental

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: FDA

characteristic: collected by

characteristic: fda lab id

text: Listeria

text: USA:OH

text: environmental swab

characteristic: ontological term

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: project name

text: United States Food and Drug Administration|Office of Regulatory Affairs|Southeast Food and Feed Laboratory

characteristic: sequenced by

text: environmental

text: monocytogenes


characteristic: External Id

text: multi-ingredient| meat

characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

characteristic: SRA accession

text: environmental/food/other

text: Malbran

characteristic: collection date

text: Escherichia

characteristic: genus

text: Argentina

characteristic: geo loc name

text: sausage

text: sausage (formed):FOODON_03315904

text: Escherichia coli

characteristic: organism

text: food

characteristic: source type

text: coli

characteristic: strain


text: multi-ingredient

characteristic: IFSAC Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

text: Malbran

text: Escherichia

text: Argentina

text: food

characteristic: isolation source

text: Escherichia coli

text: food

text: coli

characteristic: species

characteristic: title


characteristic: External Id

text: beef

characteristic: IFSAC+ Category

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: Malbran

characteristic: collected by

text: Escherichia

text: Argentina

text: ground beef

text: ground beef food product:FOODON_00001282

characteristic: ontological term

text: Escherichia coli

text: food

text: coli


text: multi-ingredient

characteristic: INSDC center name

text: live

text: Pathogen.env

text: environmental/food/other

text: Malbran

characteristic: collection date

text: Escherichia

characteristic: genus

text: Argentina

characteristic: geo loc name

text: food

text: Escherichia coli

characteristic: organism

text: food

characteristic: source type

text: coli

characteristic: strain


text: multi-ingredient| aquatic animals

characteristic: INSDC first public

text: live

characteristic: INSDC status

characteristic: ProjectAccession

text: environmental/food/other

text: Florida Department of Agriculture and Consumer Services

text: Listeria

text: USA:FL

text: seafood salad

characteristic: isolation source

text: seafood salad:FOODON_03308493

text: Listeria monocytogenes

text: food

text: monocytogenes

characteristic: species


characteristic: External Id

text: environmental-factory/production facility

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:NC

text: environmental swab sponge

text: Salmonella enterica

text: environmental

text: enterica

characteristic: title


text: chicken

characteristic: INSDC center name

text: live

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:IN

text: finished ground chicken

text: Salmonella enterica

text: food

text: enterica

text: Pathogen: environmental/food/other sample from Salmonella enterica


text: beef

text: live

text: environmental/food/other

text: Malbran

characteristic: collected by

characteristic: collection date

text: Escherichia

characteristic: genus

text: Argentina

characteristic: geo loc name

text: ground beef

characteristic: ontological term

text: Escherichia coli

text: food

text: coli


text: beef

characteristic: IFSAC Category

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Malbran

text: Escherichia

text: Argentina

text: ground beef

text: Escherichia coli

characteristic: organism

text: food

characteristic: source type

text: coli

characteristic: strain


characteristic: External Id

text: multi-ingredient

characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

characteristic: ProjectAccession

text: environmental/food/other

text: Malbran

text: Escherichia

text: Argentina

text: food

characteristic: isolation source

text: Escherichia coli

text: food

text: coli

characteristic: species


text: multi-ingredient

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: Malbran

characteristic: collected by

text: Escherichia

text: Argentina

text: hamburger

text: beef hamburger (dish):FOODON_00002737

text: Escherichia coli

text: food

text: coli

characteristic: title


text: multi-ingredient

characteristic: IFSAC Category

characteristic: INSDC first public

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Malbran

characteristic: collection date

text: Escherichia

characteristic: genus

text: Argentina

characteristic: geo loc name

text: hamburger

text: beef hamburger (dish):FOODON_00002737

characteristic: ontological term

text: Escherichia coli

text: food

text: coli


characteristic: External Id

text: environmental| chicken

characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

characteristic: INSDC status

characteristic: ProjectAccession

text: environmental/food/other

text: FDA Contracted Laboratory

text: Salmonella

text: USA:IN

text: chicken carcass rinse

text: Salmonella enterica

characteristic: organism

text: animal

characteristic: source type

text: enterica

characteristic: strain


text: multi-ingredient| meat

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: Malbran

characteristic: collected by

text: Escherichia

text: Argentina

text: fresh sausage

characteristic: isolation source

text: food (fresh):FOODON_00002457|sausage (formed):FOODON_03315904

text: Escherichia coli

text: food

text: coli

characteristic: species

characteristic: title


text: multi-ingredient| engineered seafood

characteristic: INSDC first public

text: live

text: environmental/food/other

characteristic: collection date

text: Listeria

characteristic: genus

text: USA:FL

characteristic: geo loc name

text: imitation crab salad

text: imitation crabmeat from artificially-flavored pollock:FOODON_03308641| salad:FOODON_03316042

characteristic: ontological term

text: Listeria monocytogenes

text: food

text: monocytogenes


characteristic: External Id

text: clinical/research| human

characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

characteristic: INSDC status

characteristic: ProjectAccession

text: clinical/host-associated

text: Malbran

text: Escherichia

text: Argentina

text: Homo sapiens

characteristic: host

text: stool

text: Escherichia coli

text: human

text: coli


text: clinical/research, human

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

characteristic: PublicAccession

text: clinical/host-associated

text: Malbran

text: Escherichia

text: Argentina

text: Homo sapiens

text: stool

text: Escherichia coli

characteristic: organism

text: human

characteristic: source type

text: coli

characteristic: strain


text: multi-ingredient

characteristic: IFSAC Category

characteristic: INSDC first public

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Malbran

characteristic: collected by

text: Escherichia

text: Argentina

text: hamburger

characteristic: isolation source

text: beef hamburger (dish):FOODON_00002737

text: Escherichia coli

text: food

text: coli

characteristic: species

text: ARIMEC806-06 1

characteristic: title


characteristic: External Id

text: multi-ingredient

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: Malbran

characteristic: collection date

text: Escherichia

characteristic: genus

text: Argentina

characteristic: geo loc name

text: food

characteristic: ontological term

text: Escherichia coli

text: food

text: coli


text: beef

characteristic: INSDC center name

text: live

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

text: Malbran

text: Escherichia

text: Argentina

text: ground beef

text: Escherichia coli

characteristic: organism

text: food

characteristic: source type

text: coli


text: clinical/research, human

characteristic: IFSAC+ Category

characteristic: INSDC first public

text: live

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

text: clinical/host-associated

text: Malbran

text: Escherichia

text: Argentina

text: Homo sapiens

characteristic: host

text: stool

text: Escherichia coli

text: human

text: coli

characteristic: strain


characteristic: External Id

text: environmental

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: SRA accession

text: environmental/food/other

text: FDA

characteristic: collected by

characteristic: fda lab id

text: Listeria

text: USA:OH

text: environmental swab

characteristic: isolation source

text: environmental (swab or sampling):GENEPIO_0001732

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: environmental

text: monocytogenes

characteristic: species

characteristic: title


text: environmental

characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: FDA

characteristic: collection date

text: Listeria

characteristic: genus

text: USA:OH

characteristic: geo loc name

text: environmental swab

characteristic: ontological term

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

text: environmental

characteristic: source type

text: monocytogenes

text: Pathogen: environmental/food/other sample from Listeria monocytogenes


characteristic: External Id

text: multi-ingredient| meat

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: Malbran

characteristic: collected by

text: Escherichia

text: Argentina

text: fresh sausage

text: Escherichia coli

text: food

text: coli

characteristic: strain


text: clinical/research| human

characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

characteristic: INSDC status

characteristic: ProjectAccession

text: clinical/host-associated

text: Michigan State University | College of Natural Science | Manning Laboratory

text: Escherichia

text: USA:MI

text: Homo sapiens

characteristic: host

text: stool

characteristic: isolation source

text: Escherichia coli O157:H7

text: human

text: coli

characteristic: species

text: Pathogen: clinical or host-associated sample from Escherichia coli O157:H7

characteristic: title


characteristic: External Id

text: clinical/research, human

text: live

characteristic: PublicAccession

text: clinical/host-associated

text: MSU-Manning

characteristic: collection date

text: Escherichia

characteristic: genus

text: USA:MI

characteristic: geo loc name

text: Homo sapiens

text: stool

characteristic: ontological term

text: Escherichia coli O157:H7

characteristic: organism

text: human

characteristic: source type

text: coli


text: clinical/research| human

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: SRA accession

text: clinical/host-associated

characteristic: collected by

text: Escherichia

text: USA:MI

text: Homo sapiens

text: stool

text: Escherichia coli

text: human

text: coli

characteristic: strain


text: clinical/research| human

characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

text: clinical/host-associated

text: Escherichia

text: USA:MI

text: Homo sapiens

characteristic: host

text: stool

characteristic: isolation source

text: Escherichia coli O157:H7

text: human

text: coli


characteristic: External Id

text: seeded vegetables (vine-grown)

text: live

characteristic: PublicAccession

text: environmental/food/other

text: FDA

characteristic: collection date

characteristic: fda lab id

text: Salmonella

characteristic: genus

text: Mexico

characteristic: geo loc name

text: italian squash

text: italian:ANCESTRO_0307|squash (whole, raw):FOODON_03301577

characteristic: ontological term

text: Salmonella enterica

text: GenomeTrakr

characteristic: project name

text: United States Food and Drug Administration|Office of Regulatory Affairs|Denver Laboratory

characteristic: sequenced by

text: food

text: enterica

characteristic: species

characteristic: title


text: clinical/research, human

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

characteristic: SRA accession

text: clinical/host-associated

text: MSU-Manning

characteristic: collected by

text: Escherichia

text: USA:MI

text: Homo sapiens

text: stool

text: Escherichia coli

characteristic: organism

text: human

characteristic: source type

text: coli

characteristic: strain


characteristic: External Id

text: environmental

text: live

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: FDA

characteristic: collection date

characteristic: fda lab id

text: Listeria

characteristic: genus

text: USA:CA

characteristic: geo loc name

text: environmental swab

characteristic: isolation source

text: Listeria monocytogenes

text: GenomeTrakr

text: United States Food and Drug Administration|Office of Regulatory Affairs|Pacific Southwest Food and Feed Laboratory

text: environmental

text: monocytogenes


text: fish

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: environmental/food/other

text: FDA

text: Listeria

text: USA:CA

text: canned tuna

text: tuna canned:FOODON_03301668

characteristic: ontological term

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: food

text: monocytogenes

characteristic: species

characteristic: title


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.eu

characteristic: NCBI submission model

text: MIGS/MIMS/MIMARKS.plant-associated

characteristic: NCBI submission package

characteristic: SRA accession

text: Culture collection of the Forestry and Agricultural Biotechnology Institute, University of Pretoria, Lunnon road, Hillcrest, Pretoria, South Africa, 0001

characteristic: biomaterial provider

characteristic: culture-collection

text: Fusarium fracticaudum, a novel Fusarium fujikuroi species complex member of the American clade, was isolated from diseased trees in plantations of Colombia

characteristic: description

text: Pinus maximinoi Tree Plantation

characteristic: env biome

text: Pinus maximinoi Tree Plantation

characteristic: env feature

text: Pine Mature Tree

characteristic: estimated size

text: Colombia

text: Pinus maximinoi

characteristic: host

text: Darryl Herron

characteristic: identified by

text: DNA isolated from mycelia grown in culture

text: diseased tree

text: 4.49 N 75.36 W

characteristic: lat lon

text: Fusarium fracticaudum

characteristic: organism

text: Haploid

characteristic: ploidy

text: Cell culture

characteristic: sample type

text: CBS 137234

characteristic: strain

text: Eukaryotic sample from Fusarium fracticaudum

text: culture from type material of Fusarium fracticaudum

characteristic: type material


9 grasshopper gut microbe

characteristic: External Id

text: Shaanxi Normal University

characteristic: INSDC center name

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

characteristic: collection date

text: Keywords: GSC:MIxS;MIMS:6.0

text: grasshopper gut

text: meadows

text: gut

text: China:Shaanxi

characteristic: geo loc name

text: Acrididae

text: adult individuals of this species

characteristic: isolate

text: gut of each individual

characteristic: isolation source

text: 38.35 N 109.73 E

text: insect gut metagenome

text: gut microbes

text: MIMS Metagenome sample of gut Bacteria among 9 grasshoppers

characteristic: title


text: clinical/research| human

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC first public

text: live

characteristic: ProjectAccession

characteristic: PublicAccession

characteristic: SRA accession

text: clinical/host-associated

text: Malbran

characteristic: collected by

text: Escherichia

characteristic: genus

text: Argentina

text: Homo sapiens

characteristic: host

text: stool

characteristic: ontological term

text: Escherichia coli

text: human

characteristic: source type

text: coli

characteristic: species

text: Pathogen: clinical or host-associated sample from Escherichia coli


characteristic: External Id

text: animal feed

characteristic: INSDC center name

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: environmental/food/other

text: FDA

characteristic: fda lab id

text: Salmonella

text: USA:WA

text: pet food

text: pet food:FOODON_00002682

text: Salmonella enterica

characteristic: organism

text: GenomeTrakr

characteristic: project name

text: United States Food and Drug Administration|Office of Regulatory Affairs|Northeast Food and Feed Laboratory

characteristic: sequenced by

text: Animal feed

text: enterica

characteristic: strain

text: Pathogen: environmental/food/other sample from Salmonella enterica


text: environmental

characteristic: IFSAC+ Category

characteristic: INSDC first public

text: live

characteristic: ProjectAccession

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: FDA

characteristic: collection date

text: Salmonella

text: USA:CA

characteristic: geo loc name

text: environmental swab

characteristic: isolation source

text: environmental (swab or sampling):GENEPIO_0001732

text: Salmonella enterica

text: GenomeTrakr

text: environmental

text: enterica

characteristic: title


characteristic: External Id

text: multi-ingredient| other (flavoring or seasoning)

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: environmental/food/other

text: FDA

characteristic: collected by

text: Salmonella

characteristic: genus

text: Germany

text: oatmeal spice seasoning

text: Salmonella enterica

text: GenomeTrakr

text: food

characteristic: source type

text: enterica

characteristic: species


text: nuts

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: environmental/food/other

text: FDA

characteristic: fda lab id

text: Salmonella

text: Viet Nam

text: frozen young coconut sliced

text: frozen:PATO_0001985|young:PATO_0000309|coconut (whole, raw):FOODON_03303085|sliced:FOODON_03430137

characteristic: ontological term

text: Salmonella enterica

characteristic: organism

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: food

text: enterica

characteristic: strain


text: clinical/research, human

characteristic: IFSAC+ Category

characteristic: INSDC first public

text: live

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

characteristic: PublicAccession

text: clinical/host-associated

text: Malbran

characteristic: collection date

text: Escherichia

text: Argentina

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: stool

characteristic: isolation source

text: Escherichia coli

text: human

text: coli


characteristic: External Id

text: veterinary clinical/research| other animal

characteristic: INSDC center name

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

characteristic: SRA accession

text: environmental/food/other

text: CornellAHDC

characteristic: collected by

text: Shigella

characteristic: genus

text: USA:DC

text: feces animal

text: animal:FOODON_00003004, feces:UBERON_0001988

text: Shigella sonnei

text: animal

characteristic: source type

text: sonnei

characteristic: species

text: Pathogen: environmental/food/other sample from Shigella sonnei

characteristic: title


text: plant

characteristic: IFSAC+ Category

characteristic: INSDC first public

text: live

characteristic: ProjectAccession

text: GSCL

characteristic: culture collection

text: Erwinia

text: Brazil

text: plant derived

characteristic: ontological term

text: Erwinia psidii

characteristic: organism

text: food

text: psidii

text: ATCC 49406

characteristic: strain

text: Pathogen: environmental/food/other sample from Erwinia psidii

text: type strain of Erwinia psidii

characteristic: type material


characteristic: External Id

text: multi-ingredient

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: PublicAccession

text: environmental/food/other

text: Florida Department of Agriculture and Consumer Services

characteristic: collection date

text: Listeria

text: USA:FL

characteristic: geo loc name

text: sandwich

characteristic: isolation source

text: Listeria monocytogenes

text: food

text: monocytogenes

text: Pathogen: environmental/food/other sample from Listeria monocytogenes


text: seeded vegetables (solanaceous)

characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Produces histamine

characteristic: SRA accession

text: GSCL

characteristic: collected by

text: Erwinia

characteristic: genus

text: Japan

text: tomato

text: tomato (whole, raw):FOODON_03309927

text: food

characteristic: source type

text: persicina

characteristic: species

text: ATCC 35998

text: Pathogen: environmental/food/other sample from Erwinia persicina

characteristic: title

text: type strain of Erwinia persicina


characteristic: External Id

text: multi-ingredient| turkey

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: ProjectAccession

text: environmental/food/other

text: Listeria

text: USA:FL

text: turkey breast sandwich

text: turkey breast:FOODON_00002690|turkey sandwich:FOODON_03310573

characteristic: ontological term

text: Listeria monocytogenes

characteristic: organism

text: food

text: monocytogenes

characteristic: strain


text: multi-ingredient

characteristic: INSDC last update

text: live

characteristic: PublicAccession

text: environmental/food/other

characteristic: collection date

text: Listeria

text: USA:FL

characteristic: geo loc name

text: macaroni salad

characteristic: isolation source

text: macaroni salad:FOODON_03304693

text: Listeria monocytogenes

text: food

text: monocytogenes


text: multi-ingredient| pork

characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

characteristic: SRA accession

text: environmental/food/other

characteristic: collected by

text: Listeria

text: USA:FL

text: chorizo

text: Listeria monocytogenes

text: food

text: monocytogenes


characteristic: External Id

text: fruits

text: live

text: GSCL

characteristic: culture collection

text: Erwinia

characteristic: genus

text: United Kingdom

text: rhubarb (Rheum rhaponticum)

text: rheum:NCBITAXON_3620, rhubarb stalk (whole, raw):FOODON_03309858

text: Erwinia rhapontici

text: food

characteristic: source type

text: rhapontici

characteristic: species

text: ATCC 29284

text: Pathogen: environmental/food/other sample from Erwinia rhapontici

characteristic: title


text: grains

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Produces histamine

characteristic: ProjectAccession

text: GSCL

text: Erwinia

text: France

text: wheat grain

text: wheat whole grain:FOODON_03302463

characteristic: ontological term

text: Erwinia rhapontici

characteristic: organism

text: food

text: rhapontici

text: ATCC 29286

characteristic: strain


text: multi-ingredient| pork

characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

characteristic: PublicAccession

text: environmental/food/other

characteristic: collection date

text: Listeria

text: USA:FL

characteristic: geo loc name

text: ham sandwich

characteristic: isolation source

text: ham sandwich:FOODON_03307807

text: Listeria monocytogenes

text: food

text: monocytogenes


characteristic: External Id

text: vegetable row crops (stem)

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Produces histamine

characteristic: SRA accession

text: GSCL

characteristic: collected by

text: Erwinia

text: USA:AL

text: celery

text: celery stalk (raw):FOODON_03301727

text: food

text: persicinus


text: multi-ingredient| beef| pork

characteristic: INSDC center name

text: live

text: environmental/food/other

text: Listeria

characteristic: genus

text: USA:FL

text: bologna

text: Listeria monocytogenes

text: food

characteristic: source type

text: monocytogenes

characteristic: species

characteristic: title


text: multi-ingredient| pork

characteristic: INSDC first public

text: live

characteristic: ProjectAccession

text: environmental/food/other

text: Listeria

text: USA:FL

text: spanish chorizo

text: spanish:ANCESTRO_0392|chorizo:FOODON_03316070

characteristic: ontological term

text: Listeria monocytogenes

characteristic: organism

text: food

text: monocytogenes

characteristic: strain


text: other (sweetener)| pork

characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

characteristic: PublicAccession

text: environmental/food/other

characteristic: collection date

text: Listeria

text: USA:FL

characteristic: geo loc name

text: honey maple ham

text: ham food product:FOODON_00002502| honey:UBERON_0036016

text: Listeria monocytogenes

text: food

text: monocytogenes


characteristic: External Id

text: beans| sprouts

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

characteristic: SRA accession

text: environmental/food/other

text: Listeria

text: USA:FL

text: bean sprout

characteristic: isolation source

text: bean sprout:FOODON_00002576

text: Listeria monocytogenes

text: food

text: monocytogenes


text: multi-ingredient| root/underground (tubers)

characteristic: INSDC center name

text: live

text: environmental/food/other

characteristic: collected by

text: Listeria

characteristic: genus

text: USA:FL

text: potato salad

text: potato salad:FOODON_03304708

text: Listeria monocytogenes

text: food

characteristic: source type

text: monocytogenes

characteristic: species


text: multi-ingredient| fish

characteristic: INSDC first public

text: live

characteristic: ProjectAccession

text: environmental/food/other

text: Listeria

text: USA:FL

text: tuna salad sandwich

text: tuna salad sandwich:FOODON_03307771

characteristic: ontological term

text: Listeria monocytogenes

characteristic: organism

text: food

text: monocytogenes

characteristic: title


text: vegetable row crops (stem)

characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

text: Produces histamine

characteristic: PublicAccession

text: GSCL

characteristic: collection date

text: Erwinia

text: USA:AL

text: celery

text: celery stalk (raw):FOODON_03301727

text: food

text: persicina

characteristic: strain


characteristic: External Id

text: fruits

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

characteristic: SRA accession

text: GSCL

characteristic: culture collection

text: Erwinia

text: United Kingdom

characteristic: geo loc name

text: rhubarb (Rheum rhaponticum)

text: Erwinia rhapontici

text: food

text: rhapontici

text: ATCC 29283

text: type strain of Erwinia rhapontici

characteristic: type material


text: seeds

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: GSCL

characteristic: collected by

text: Pantoea

characteristic: genus

text: Burundi

text: coffee seed

characteristic: isolation source

text: coffee (liquid drink):FOODON_03301036, seed:PO_0009010

text: Pantoea coffeiphila

text: food

characteristic: source type

text: coffeiphila

characteristic: species

text: Pathogen: environmental/food/other sample from Pantoea coffeiphila

text: type strain of Pantoea coffeiphila


text: tropical fruit

characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

characteristic: ProjectAccession

characteristic: PublicAccession

text: GSCL

text: Erwinia

text: France

text: carica papaya

text: carica papaya:NCBITAXON_3649

characteristic: ontological term

text: Erwinia papayae

characteristic: organism

text: food

text: papayae

text: Pathogen: environmental/food/other sample from Erwinia papayae

characteristic: title

text: type strain of Erwinia papayae


characteristic: External Id

text: clinical/research, human

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Produces histamine

characteristic: SRA accession

text: clinical/host-associated

text: GSCL

characteristic: collection date

characteristic: culture collection

text: Erwinia

text: USA:TX

text: Homo sapiens

characteristic: host

text: Urinary tract infection

characteristic: host disease

text: human

text: persicina

text: ATCC 700561

characteristic: strain

text: Pathogen: clinical or host-associated sample from Erwinia persicina


text: pome fruit

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Produces histamine

text: GSCL

characteristic: collected by

text: Pluralibacter

characteristic: genus

text: North Korea

characteristic: geo loc name

text: pear leave

characteristic: isolation source

text: pear (whole, raw):FOODON_03301724, leaf:PO_0025034

text: Pluralibacter pyrinus

text: food

characteristic: source type

text: pyrinus

characteristic: species

text: ATCC 49851

text: Pathogen: environmental/food/other sample from Pluralibacter pyrinus

text: type strain of Pluralibacter pyrinus

characteristic: type material


characteristic: External Id

text: Harvard Medical School

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

text: Lambdavirus lambda

characteristic: organism

text: Unmethylated cl857 Sam7 Lambda DNA

characteristic: title

text: Incubated with human DNMT3A, SAM, histone H3

characteristic: treatment


text: Harvard Medical School

text: live

characteristic: INSDC status

text: Generic

characteristic: SRA accession

text: Lambdavirus lambda

text: Unmethylated cl857 Sam7 Lambda DNA

text: Incubated with SAM, histone H3


text: veterinary clinical/research, pig

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: NC State University College of Veterinary Medicine

characteristic: collection date

text: Campylobacter

text: USA:NC

text: feces pig

text: feces:UBERON_0001988, swine:FOODON_03411136

characteristic: ontological term

text: Campylobacter coli

text: animal

text: coli

characteristic: strain

text: Pathogen: environmental/food/other sample from Campylobacter coli


characteristic: External Id

text: veterinary clinical/research| pig

characteristic: INSDC last update

text: live

text: environmental/food/other

text: North Carolina State University | College of Veterinary Medicine | Thakur Molecular Epidemiology Laboratory

characteristic: collected by

text: Campylobacter

characteristic: genus

text: USA:NC

characteristic: geo loc name

text: feces pig

characteristic: isolation source

text: Campylobacter coli

text: animal

characteristic: source type

text: coli

characteristic: species


text: veterinary clinical/research| pig

characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

characteristic: SRA accession

text: environmental/food/other

text: Campylobacter

text: USA:NC

text: feces pig

text: feces:UBERON_0001988| swine:FOODON_03411136

text: Campylobacter coli

characteristic: organism

text: animal

text: coli

characteristic: title


text: veterinary clinical/research| pig

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

characteristic: collection date

text: Campylobacter

text: USA:NC

text: feces sow

text: feces:UBERON_0001988, sow:FOODON_00003333

text: Campylobacter coli

text: animal

text: coli


characteristic: External Id

text: Northwestern University Feinberg School of Medicine

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission model

characteristic: cell line

text: WT

characteristic: genotype

text: Homo sapiens

text: Ovary

characteristic: tissue

text: Treated cells with 1nM siCAG/CUG for 2 days

characteristic: treatment/infection


characteristic: INSDC secondary accession

text: live

text: Generic

text: WT

text: Homo sapiens

text: HeyA8_nontargeting siRNA

text: Ovary

text: Treated cells with 1nM non-targeting siScr for two days


text: live

characteristic: INSDC status

text: Generic

text: WT

text: Homo sapiens

text: Ovary

text: Treated cells with 1nM siCGA/UCG for 2 days


text: Engineered | Wastewater | Nutrient removal | Biological phosphorus removal | Bioreactor

characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: USA: Walnut Creek, California.

characteristic: geo loc name

text: 37.9313884 N 122.0217454 W

characteristic: lat lon

text: activated sludge metagenome

text: Activated sludge microbial communities from EBPR reactors in the US and Australia - Sludge/Termite gut/Gutless worm pooled subclone fosmids


text: vegetable row crops (stem)

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Produces histamine

characteristic: SRA accession

text: GSCL

characteristic: collected by

text: Erwinia

characteristic: genus

text: USA:AL

text: celery

characteristic: isolation source

text: celery stalk (raw):FOODON_03301727

characteristic: ontological term

text: food

characteristic: source type

text: not available

characteristic: species

characteristic: strain

text: Pathogen: environmental/food/other sample from Erwinia sp. CO-4

characteristic: title


characteristic: External Id

text: vegetable row crops (stem)

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Produces histamine

characteristic: ProjectAccession

characteristic: PublicAccession

text: GSCL

characteristic: collection date

text: Erwinia

text: USA:AL

text: celery

text: celery stalk (raw):FOODON_03301727

text: food

text: not available

text: Pathogen: environmental/food/other sample from Erwinia sp. CO-3


text: vegetable row crops (stem)

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Produces histamine

text: GSCL

text: Pluralibacter

text: USA:AL

characteristic: geo loc name

text: celery

text: celery stalk (raw):FOODON_03301727

text: food

text: not available

text: Pathogen: environmental/food/other sample from Pluralibacter sp. CO-13


text: Royal college of Surgeons in Ireland

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: 9 weeks

characteristic: age

text: Wild type

characteristic: genotype

text: Rattus norvegicus

characteristic: organism

text: Retina

text: Sprague-Dawley

text: Retina

characteristic: tissue

text: rat rep3


characteristic: External Id

text: Royal college of Surgeons in Ireland

characteristic: INSDC last update

text: live

text: Generic

text: 9 weeks

text: Wild type

text: Rattus norvegicus

text: Retina

text: Sprague-Dawley

characteristic: strain

text: Retina

text: rat rep2

characteristic: title


text: Royal college of Surgeons in Ireland

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: 9 weeks

text: Wild type

text: Rattus norvegicus

text: Retina

text: Sprague-Dawley

text: Retina

text: rat rep1


text: Royal college of Surgeons in Ireland

text: live

text: Generic

text: 9 weeks

text: Wild type

text: Mus musculus

text: Retina

text: Retina

text: mouse rep3


text: Royal college of Surgeons in Ireland

text: live

text: Generic

text: 9 weeks

text: Wild type

text: Mus musculus

text: Retina

text: Retina

text: mouse rep2


text: Royal college of Surgeons in Ireland

text: live

text: Generic

text: 9 weeks

text: Wild type

text: Mus musculus

text: Retina

text: Retina

text: mouse rep1


text: clinical/research, human

characteristic: IFSAC+ Category

text: live

characteristic: ProjectAccession

characteristic: PublicAccession

text: clinical/host-associated

text: MSU-Manning

characteristic: collected by

characteristic: collection date

text: Escherichia

characteristic: genus

text: USA:MI

text: Homo sapiens

characteristic: host

text: stool

characteristic: isolation source

characteristic: ontological term

text: Escherichia coli O157:H7

characteristic: serovar

text: human

characteristic: source type

text: coli

characteristic: species

text: Pathogen: clinical or host-associated sample from Escherichia coli O157:H7


characteristic: External Id

text: Royal college of Surgeons in Ireland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Post natal day 14

characteristic: age

text: oxygen-induced retinopathy

characteristic: disease state

text: Wild type

characteristic: genotype

text: Rattus norvegicus

characteristic: organism

text: Retina

text: Sprague-Dawley

text: Retina

characteristic: tissue

text: OIR-P14 rep1


text: Royal college of Surgeons in Ireland

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Post natal day 14

text: control

text: Wild type

text: Rattus norvegicus

text: Retina

text: Sprague-Dawley

characteristic: strain

text: Retina

text: Sham-P14 rep3

characteristic: title


text: Royal college of Surgeons in Ireland

text: live

text: Generic

text: Post natal day 14

text: control

text: Wild type

text: Rattus norvegicus

text: Retina

text: Sprague-Dawley

text: Retina

text: Sham-P14 rep2


text: Royal college of Surgeons in Ireland

text: live

text: Generic

text: Post natal day 14

text: control

text: Wild type

text: Rattus norvegicus

text: Retina

text: Sprague-Dawley

text: Retina

text: Sham-P14 rep1


text: Royal college of Surgeons in Ireland

text: live

text: Generic

text: Post natal day 29

text: oxygen-induced retinopathy

text: Wild type

text: Rattus norvegicus

text: Retina

text: Sprague-Dawley

text: Retina

text: OIR-P29 rep3


text: Royal college of Surgeons in Ireland

text: live

text: Generic

text: Post natal day 29

text: oxygen-induced retinopathy

text: Wild type

text: Rattus norvegicus

text: Retina

text: Sprague-Dawley

text: Retina

text: OIR-P29 rep2


text: Royal college of Surgeons in Ireland

text: live

text: Generic

text: Post natal day 29

text: oxygen-induced retinopathy

text: Wild type

text: Rattus norvegicus

text: Retina

text: Sprague-Dawley

text: Retina

text: OIR-P29 rep1


text: Royal college of Surgeons in Ireland

text: live

text: Generic

text: Post natal day 14

text: oxygen-induced retinopathy

text: Wild type

text: Rattus norvegicus

text: Retina

text: Sprague-Dawley

text: Retina

text: OIR-P14 rep3


text: Royal college of Surgeons in Ireland

text: live

text: Generic

text: Post natal day 14

text: oxygen-induced retinopathy

text: Wild type

text: Rattus norvegicus

text: Retina

text: Sprague-Dawley

text: Retina

text: OIR-P14 rep2


text: veterinary clinical/research, other animal

characteristic: IFSAC+ Category

text: live

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: TGEN

characteristic: collected by

characteristic: collection date

text: Escherichia

characteristic: genus

text: USA:AZ

characteristic: geo loc name

text: stool (Antilocapra americana)

characteristic: isolation source

characteristic: ontological term

text: Escherichia coli

text: animal

characteristic: source type

text: coli

characteristic: species

text: Pathogen: environmental/food/other sample from Escherichia coli


characteristic: External Id

text: Intercellular Signalling in Cardiovascular Development & Disease, Centro Nacional de Investigaciones Cardiovasculares Carlos III (CNIC).

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

characteristic: developmental stage

text: WT

characteristic: genotype

text: Mus musculus

characteristic: organism

text: Heart

text: heart


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Mus musculus

text: Heart

text: heart

characteristic: tissue

characteristic: title


text: veterinary clinical/research| pig

characteristic: IFSAC+ Category

text: live

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: North Carolina State University | College of Veterinary Medicine | Thakur Molecular Epidemiology Laboratory

characteristic: collected by

characteristic: collection date

text: Campylobacter

characteristic: genus

text: USA:NC

characteristic: geo loc name

text: feces pig

characteristic: isolation source

text: feces:UBERON_0001988, swine:FOODON_03411136

text: Campylobacter coli

text: animal

text: coli

characteristic: strain

text: Pathogen: environmental/food/other sample from Campylobacter coli


characteristic: External Id

text: veterinary clinical/research| cow

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: SRA accession

text: environmental/food/other

text: cryptic lineage 1

text: Escherichia

text: USA:OH

text: Bos taurus

characteristic: host

text: feces (Bos taurus)

text: bos taurus:NCBITAXON_9913| feces:UBERON_0001988

characteristic: ontological term

text: animal

characteristic: source type

text: Pathogen: environmental/food/other sample from Escherichia sp.


text: environmental

characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: environmental/food/other

text: cryptic lineage 1

characteristic: genotype

text: Escherichia

text: USA:OH

text: soil

text: environmental

characteristic: title


text: dairy

text: live

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: North Carolina Department of Agriculture and Consumer Services

characteristic: collected by

characteristic: collection date

text: Salmonella

characteristic: genus

text: USA:NC

text: milk

text: Salmonella enterica

characteristic: organism

text: food

text: enterica

characteristic: species

text: Pathogen: environmental/food/other sample from Salmonella enterica


characteristic: External Id

text: veterinary clinical/research, pig

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: environmental/food/other

text: NC State University College of Veterinary Medicine

text: Campylobacter

text: USA:NC

characteristic: geo loc name

text: feces pig

characteristic: isolation source

text: Campylobacter coli

text: animal

text: coli

characteristic: strain


text: veterinary clinical/research, cow

characteristic: IFSAC+ Category

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: Escherichia

text: USA:OH

text: feces (Bos taurus)

text: bos taurus:NCBITAXON_9913, feces:UBERON_0001988

characteristic: ontological term

text: Escherichia coli

text: animal

characteristic: source type

text: coli


characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

characteristic: SRA accession

characteristic: animal id

characteristic: collection date

text: Zebra

text: Zebra

characteristic: experimental group

text: USA

text: Equus quagga boehmi

characteristic: host

text: Zebra

characteristic: host common name

text: fecal material

text: gut metagenome

characteristic: sample number

text: Metagenome or environmental sample from gut metagenome

characteristic: title


characteristic: External Id

text: Stanford University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.host-associated

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Marine environment

characteristic: env biome

text: Marine mammal

characteristic: env feature

text: Swab sample of the gingival sulcus

text: TRUE

characteristic: environmental sample

text: USA: San Diego Bay, CA

characteristic: geo loc name

text: Tursiops truncatus

text: 5 years

characteristic: host age

text: Gingival sulcus (mouth)

characteristic: host body habitat

text: male

characteristic: host sex

characteristic: host subject id

characteristic: host taxid

characteristic: isolate

text: swab sample of gingival sulcus (mouth) from 5 year old male Dolphin_J

characteristic: isolation source

text: 32.6717 N 117.1441 W

characteristic: lat lon

text: oral metagenome

characteristic: metagenome source

text: TRUE

characteristic: metagenomic

text: This BioSample is a metagenomic assembly obtained from the oral metagenome BioSample: SAMN01162460.

characteristic: note

text: Planctomycetota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample-type

text: Uncultured bacteria isolated from gingival sulcus of 5 year old male Dolphin_J


S. aureus MRSA L401

characteristic: External Id

text: Universidad Autonoma de Sinaloa

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Facultad de Ciencias Quimico Biologicas

characteristic: collected by

characteristic: collection date

text: Mexico: Culiacan, Sinaloa

text: Homo sapiens

characteristic: host

text: Pharyngitis

characteristic: host disease

text: Healthy

characteristic: host health state

text: Child

text: pharyngeal exudate from child's pharynx

text: 24.826474 N 107.382557 W

text: Staphylococcus aureus

characteristic: strain

text: Pathogen: clinical or host-associated sample from Staphylococcus aureus

characteristic: title


text: The University of Tokyo

text: live

text: Microbe, viral or environmental

characteristic: organism

text: JCM 10707

text: Microbe sample from Companilactobacillus kimchii DSM 13961 = JCM 10707

text: type strain of Lactobacillus kimchii

characteristic: type material


DSM 24636

characteristic: External Id

text: Universitat Rovira i Virgili

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: India

characteristic: geo loc name

text: Estuarine sediment

characteristic: isolation source

text: Halarcobacter anaerophilus

text: Whole organism

characteristic: sample type

text: DSM 24636

text: Microbe sample from Halarcobacter anaerophilus

text: type strain of Arcobacter anaerophilus


text: veterinary clinical/research| pig

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: Campylobacter

characteristic: genus

text: USA:NC

text: live pig swab

text: swine:FOODON_03411136, swab:NCIT_C17627

characteristic: ontological term

text: Campylobacter coli

text: animal

characteristic: source type

text: coli

characteristic: species


text: environmental

text: live

characteristic: SRA accession

text: environmental/food/other

text: North Carolina State University | College of Veterinary Medicine | Thakur Molecular Epidemiology Laboratory

characteristic: collected by

characteristic: collection date

text: Campylobacter

text: USA:NC

text: soil

text: Campylobacter coli

characteristic: organism

text: environmental

text: coli

characteristic: strain

characteristic: title


characteristic: External Id

text: environmental

characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

text: environmental/food/other

text: Campylobacter

text: USA:NC

characteristic: geo loc name

text: lagoon

characteristic: isolation source

text: Campylobacter coli

text: environmental

text: coli