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text: Pathogen: environmental/food/other sample from Escherichia coli


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characteristic: IFSAC+ Category

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text: environmental/food/other

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text: canis lupus familiaris:NCBITAXON_9615, ear:UBERON_0001690

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text: Radboud University

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text: 21 days in vitro

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text: Radboud University

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text: Radboud University

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text: clinical/research, human

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text: live

text: PAK

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text: hormaechei

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text: Pathogen: clinical or host-associated sample from Enterobacter hormaechei

type: AMR curated data - CABBAGE

value: ampicillin

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characteristic: External Id

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text: clinical/research, human

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characteristic: External Id

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characteristic: External Id

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text: clinical/host-associated

text: Aga Khan University, Karachi

text: Klebsiella

text: Pakistan

text: Homo sapiens

text: urine

text: urinary tract

text: Klebsiella pneumoniae

characteristic: organism

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: human

text: pneumoniae

characteristic: species

characteristic: strain

characteristic: title

value: colistin

value: EUCAST

value: resistant

value: Klebsiella pneumoniae

value: ampicillin-sulbactam

value: trimethoprim-sulfamethoxazole

value: piperacillin-tazobactam

value: cefotaxime

value: imipenem

value: tigecycline


characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: PAK

characteristic: ProjectAccession

characteristic: PublicAccession

text: clinical/host-associated

text: Aga Khan University, Karachi

characteristic: collected by

characteristic: collection date

text: Klebsiella

text: Pakistan

text: Homo sapiens

text: cerebrospinal fluid (CSF)

text: central nervous system

text: Klebsiella pneumoniae

text: GenomeTrakr

text: pneumoniae

text: Homo sapiens

characteristic: specific host

value: ciprofloxacin

value: CLSI

value: mg/L

value: doripenem

value: ceftazidime

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value: ampicillin

value: ceftriaxone

value: cefazolin

value: tobramycin


text: clinical/research, human

characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: PAK

text: clinical/host-associated

text: Aga Khan University, Karachi

text: Klebsiella

characteristic: genus

text: Pakistan

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: urine

characteristic: isolation source

text: urinary tract

characteristic: ontological term

text: Klebsiella pneumoniae

text: GenomeTrakr

text: human

characteristic: source type

text: pneumoniae

value: cefoxitin

value: resistant

value: Klebsiella pneumoniae

value: chloramphenicol

value: aztreonam

value: susceptible

value: colistin

value: EUCAST

value: cefepime

value: levofloxacin

value: polymyxin B


characteristic: External Id

text: clinical/research, human

characteristic: INSDC first public

text: live

text: PAK

characteristic: SRA accession

text: clinical/host-associated

text: Aga Khan University, Karachi

text: Klebsiella

text: Pakistan

text: Homo sapiens

text: urine

text: urinary tract

text: Klebsiella pneumoniae

characteristic: organism

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: human

text: pneumoniae

characteristic: species

characteristic: strain

characteristic: title

value: doripenem

value: CLSI

value: mg/L

value: ceftazidime

value: ampicillin-sulbactam

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value: meropenem

value: ciprofloxacin

value: trimethoprim-sulfamethoxazole


text: clinical/research, human

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: PAK

characteristic: ProjectAccession

characteristic: PublicAccession

text: clinical/host-associated

text: Aga Khan University, Karachi

characteristic: collected by

characteristic: collection date

text: Klebsiella

text: Pakistan

text: Homo sapiens

text: urine

text: urinary tract

text: Klebsiella pneumoniae

text: GenomeTrakr

text: human

text: pneumoniae

value: resistant

value: Klebsiella pneumoniae

value: gentamicin

value: cefotaxime

value: piperacillin-tazobactam

value: ampicillin

value: tigecycline

value: amikacin

value: minocycline

value: intermediate

value: tobramycin


characteristic: External Id

text: clinical/research, human

text: live

characteristic: INSDC status

text: PAK

text: clinical/host-associated

text: Aga Khan University, Karachi

text: Klebsiella

characteristic: genus

text: Pakistan

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: blood

characteristic: isolation source

text: blood

characteristic: ontological term

text: Klebsiella pneumoniae

text: GenomeTrakr

text: human

characteristic: source type

text: pneumoniae

value: CLSI

value: mg/L

value: susceptible

value: ceftriaxone

value: chloramphenicol

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value: cefoxitin

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value: aztreonam


text: clinical/research, human

characteristic: INSDC first public

text: live

text: PAK

characteristic: SRA accession

text: clinical/host-associated

text: Aga Khan University, Karachi

text: Enterobacter

text: Pakistan

text: Homo sapiens

text: blood

text: blood

text: Enterobacter cloacae

characteristic: organism

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: human

text: cloacae

characteristic: species

characteristic: strain

text: Pathogen: clinical or host-associated sample from Enterobacter cloacae

characteristic: title

value: tetracycline

value: resistant

value: Enterobacter cloacae

value: polymyxin B

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value: meropenem

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value: ertapenem

value: levofloxacin


characteristic: INSDC center name

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: PAK

characteristic: ProjectAccession

characteristic: PublicAccession

text: clinical/host-associated

text: Aga Khan University, Karachi

characteristic: collected by

characteristic: collection date

text: Klebsiella

text: Pakistan

text: Homo sapiens

text: cerebrospinal fluid (CSF)

text: central nervous system

text: Klebsiella pneumoniae

text: GenomeTrakr

text: pneumoniae

text: Homo sapiens

characteristic: specific host

value: piperacillin-tazobactam

value: CLSI

value: mg/L

value: Klebsiella pneumoniae

value: ciprofloxacin

value: intermediate

value: trimethoprim-sulfamethoxazole

value: colistin

value: EUCAST

value: amikacin

value: cefazolin

value: ampicillin


characteristic: External Id

text: clinical/research, human

characteristic: IFSAC+ Category

text: live

characteristic: INSDC status

text: PAK

text: clinical/host-associated

text: Aga Khan University, Karachi

text: Klebsiella

characteristic: genus

text: Pakistan

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: blood

characteristic: isolation source

text: blood

characteristic: ontological term

text: Klebsiella pneumoniae

text: GenomeTrakr

text: human

characteristic: source type

text: pneumoniae

value: resistant

value: ampicillin-sulbactam

value: doripenem

value: susceptible

value: ceftriaxone

value: polymyxin B

value: tetracycline

value: tobramycin

value: aztreonam

value: imipenem


text: clinical/research, human

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: PAK

characteristic: SRA accession

text: clinical/host-associated

text: Aga Khan University, Karachi

text: Serratia

text: Pakistan

text: Homo sapiens

text: blood

text: blood

text: Serratia marcescens

characteristic: organism

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: human

text: marcescens

characteristic: species

characteristic: strain

characteristic: title

value: gentamicin

value: CLSI

value: mg/L

value: Serratia marcescens

value: cefepime

value: chloramphenicol

value: intermediate

value: levofloxacin

value: meropenem

value: cefoxitin


characteristic: External Id

text: clinical/research, human

characteristic: IFSAC+ Category

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: PAK

characteristic: ProjectAccession

characteristic: PublicAccession

text: clinical/host-associated

text: Aga Khan University, Karachi

characteristic: collected by

characteristic: collection date

text: Klebsiella

text: Pakistan

text: Homo sapiens

text: throat

text: respiratory tract

text: Klebsiella pneumoniae

text: GenomeTrakr

text: human

text: pneumoniae

value: amikacin

value: resistant

value: Klebsiella pneumoniae

value: susceptible

value: minocycline

value: doripenem

value: cefotaxime

value: ampicillin-sulbactam

value: ertapenem

value: ciprofloxacin


text: clinical/research, human

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: PAK

text: clinical/host-associated

text: Aga Khan University, Karachi

text: Klebsiella

characteristic: genus

text: Pakistan

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: urine

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text: urinary tract

characteristic: ontological term

text: Klebsiella pneumoniae

text: GenomeTrakr

text: human

characteristic: source type

text: pneumoniae

value: aztreonam

value: CLSI

value: mg/L

value: trimethoprim-sulfamethoxazole

value: gentamicin

value: polymyxin B

value: tetracycline


text: clinical/research, human

characteristic: INSDC first public

text: live

text: PAK

characteristic: SRA accession

text: clinical/host-associated

text: Aga Khan University, Karachi

text: Klebsiella

text: Pakistan

text: Homo sapiens

text: urine

text: urinary tract

text: Klebsiella pneumoniae

characteristic: organism

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: human

text: pneumoniae

characteristic: species

characteristic: strain

characteristic: title

value: ceftriaxone

value: amikacin

value: chloramphenicol

value: intermediate

value: cefazolin

value: cefoxitin


characteristic: External Id

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: PAK

characteristic: ProjectAccession

characteristic: PublicAccession

text: clinical/host-associated

text: Aga Khan University, Karachi

characteristic: collected by

characteristic: collection date

text: Klebsiella

text: Pakistan

text: Homo sapiens

text: general (wound, abcess, Etc.)

text: Klebsiella pneumoniae

text: GenomeTrakr

text: pneumoniae

text: Homo sapiens

characteristic: specific host

value: resistant

value: Klebsiella pneumoniae

value: susceptible

value: ceftazidime

value: tigecycline

value: EUCAST

value: levofloxacin

value: tobramycin


text: clinical/research, human

characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: PAK

text: clinical/host-associated

text: Aga Khan University, Karachi

text: Klebsiella

characteristic: genus

text: Pakistan

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: blood

characteristic: isolation source

text: blood

characteristic: ontological term

text: Klebsiella pneumoniae

text: GenomeTrakr

text: human

characteristic: source type

text: pneumoniae

value: ertapenem

value: CLSI

value: mg/L

value: doripenem

value: gentamicin

value: minocycline

value: imipenem

value: piperacillin-tazobactam

value: cefepime


characteristic: External Id

text: clinical/research, human

characteristic: INSDC first public

text: live

text: PAK

characteristic: SRA accession

text: clinical/host-associated

text: Aga Khan University, Karachi

text: Klebsiella

text: Pakistan

text: Homo sapiens

text: throat

text: respiratory tract

text: Klebsiella pneumoniae

characteristic: organism

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: human

text: pneumoniae

characteristic: species

characteristic: strain

characteristic: title

value: ampicillin-sulbactam

value: resistant

value: amikacin

value: intermediate

value: ceftriaxone

value: trimethoprim-sulfamethoxazole

value: cefotaxime

value: ciprofloxacin

value: tetracycline


text: clinical/research, human

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: PAK

characteristic: ProjectAccession

characteristic: PublicAccession

text: clinical/host-associated

text: Aga Khan University, Karachi

characteristic: collected by

characteristic: collection date

text: Klebsiella

text: Pakistan

text: Homo sapiens

text: urine

text: urinary tract

text: Klebsiella pneumoniae

text: GenomeTrakr

text: human

text: pneumoniae

value: polymyxin B

value: CLSI

value: Klebsiella pneumoniae

value: susceptible

value: levofloxacin

value: ampicillin

value: tigecycline

value: EUCAST

value: aztreonam


characteristic: External Id

text: live

characteristic: INSDC status

text: PAK

text: clinical/host-associated

text: Aga Khan University, Karachi

text: Klebsiella

characteristic: genus

text: Pakistan

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: wound

characteristic: isolation source

text: skin or soft tissue

text: Klebsiella pneumoniae

text: GenomeTrakr

text: pneumoniae

text: Homo sapiens

characteristic: specific host

value: piperacillin-tazobactam

value: mg/L

value: resistant

value: doripenem

value: cefepime

value: colistin

value: gentamicin

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value: meropenem

value: minocycline


text: clinical/research, human

characteristic: INSDC first public

text: live

text: PAK

characteristic: SRA accession

text: clinical/host-associated

text: Aga Khan University, Karachi

text: Serratia

text: Pakistan

text: Homo sapiens

text: throat

text: respiratory tract

characteristic: ontological term

text: Serratia marcescens

characteristic: organism

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: human

characteristic: source type

text: marcescens

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value: cefotaxime

value: CLSI

value: Serratia marcescens

value: cefoxitin

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value: tobramycin

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value: ceftazidime


text: clinical/research, human

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: PAK

characteristic: ProjectAccession

characteristic: PublicAccession

text: clinical/host-associated

text: Aga Khan University, Karachi

characteristic: collected by

characteristic: collection date

text: Acinetobacter

text: Pakistan

text: Homo sapiens

text: urine

text: urinary tract

text: Acinetobacter baumannii

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text: human

text: baumannii

text: Pathogen: clinical or host-associated sample from Acinetobacter baumannii

characteristic: title

value: piperacillin-tazobactam

value: mg/L

value: Acinetobacter baumannii

value: tetracycline

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value: polymyxin B


characteristic: External Id

text: clinical/research, human

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: PAK

characteristic: SRA accession

text: clinical/host-associated

text: Aga Khan University, Karachi

text: Klebsiella

characteristic: genus

text: Pakistan

characteristic: geo loc name

text: Homo sapiens

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text: urine

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text: urinary tract

text: Klebsiella pneumoniae

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value: gentamicin

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value: Klebsiella pneumoniae

value: meropenem

value: colistin

value: EUCAST

value: minocycline

value: trimethoprim-sulfamethoxazole

value: chloramphenicol

value: doripenem


text: clinical/research, human

characteristic: IFSAC+ Category

text: live

text: PAK

text: hormaechei

characteristic: Species

text: clinical/host-associated

text: Aga Khan University, Karachi

text: Enterobacter

text: Pakistan

text: Homo sapiens

text: trachea

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characteristic: ontological term

text: Enterobacter hormaechei

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characteristic: project name

characteristic: sequenced by

text: human

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value: CLSI

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text: clinical/research, human

characteristic: INSDC center name

characteristic: INSDC last update

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text: live

text: PAK

characteristic: ProjectAccession

characteristic: PublicAccession

text: clinical/host-associated

text: Aga Khan University, Karachi

characteristic: collected by

characteristic: collection date

text: Acinetobacter

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text: Homo sapiens

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characteristic: External Id

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: PAK

characteristic: SRA accession

text: clinical/host-associated

text: Aga Khan University, Karachi

text: Klebsiella

characteristic: genus

text: Pakistan

characteristic: geo loc name

text: Homo sapiens

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text: general (wound, abcess, Etc.)

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text: Klebsiella pneumoniae

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text: pneumoniae

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value: CLSI

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value: chloramphenicol

value: cefazolin

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value: levofloxacin


text: clinical/research, human

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: PAK

text: clinical/host-associated

text: Aga Khan University, Karachi

text: Klebsiella

text: Pakistan

text: Homo sapiens

text: urine

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characteristic: ontological term

text: Klebsiella pneumoniae

characteristic: organism

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: human

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text: pneumoniae

characteristic: strain

value: tetracycline

value: gentamicin

value: tigecycline

value: EUCAST

value: trimethoprim-sulfamethoxazole

value: colistin

value: piperacillin-tazobactam

value: ciprofloxacin


characteristic: External Id

text: clinical/research, human

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: PAK

characteristic: ProjectAccession

characteristic: PublicAccession

text: clinical/host-associated

text: Aga Khan University, Karachi

characteristic: collected by

characteristic: collection date

text: Klebsiella

text: Pakistan

text: Homo sapiens

text: urine

text: urinary tract

text: Klebsiella pneumoniae

text: GenomeTrakr

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text: pneumoniae

characteristic: species

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value: CLSI

value: resistant

value: minocycline

value: ceftazidime

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text: clinical/research, human

characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: PAK

characteristic: SRA accession

text: clinical/host-associated

text: Aga Khan University, Karachi

text: Klebsiella

characteristic: genus

text: Pakistan

characteristic: geo loc name

text: Homo sapiens

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text: blood

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text: blood

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value: mg/L

value: Klebsiella pneumoniae

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value: tobramycin

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value: ampicillin

value: ampicillin-sulbactam

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value: levofloxacin


characteristic: External Id

text: clinical/research, human

characteristic: INSDC last update

text: live

text: PAK

text: clinical/host-associated

text: Aga Khan University, Karachi

text: Klebsiella

text: Pakistan

text: Homo sapiens

text: urine

text: urinary tract

characteristic: ontological term

text: Klebsiella pneumoniae

characteristic: organism

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: human

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text: pneumoniae

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value: piperacillin-tazobactam

value: CLSI

value: resistant

value: polymyxin B

value: ciprofloxacin

value: minocycline

value: tigecycline

value: EUCAST

value: cefazolin


text: clinical/research, human

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: PAK

characteristic: ProjectAccession

characteristic: PublicAccession

text: clinical/host-associated

text: Aga Khan University, Karachi

characteristic: collected by

characteristic: collection date

text: Klebsiella

text: Pakistan

text: Homo sapiens

text: throat

text: respiratory tract

text: Klebsiella pneumoniae

text: GenomeTrakr

text: human

text: pneumoniae

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value: aztreonam

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characteristic: INSDC center name

text: live

characteristic: INSDC status

text: PAK

characteristic: SRA accession

text: clinical/host-associated

text: Aga Khan University, Karachi

text: Klebsiella

characteristic: genus

text: Pakistan

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: cerebrospinal fluid (CSF)

text: central nervous system

text: Klebsiella pneumoniae

text: GenomeTrakr

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value: piperacillin-tazobactam

value: ampicillin-sulbactam

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value: ceftriaxone


characteristic: External Id

text: clinical/research, human

characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

text: PAK

text: clinical/host-associated

text: Aga Khan University, Karachi

text: Klebsiella

text: Pakistan

text: Homo sapiens

text: throat

characteristic: isolation source

text: respiratory tract

characteristic: ontological term

text: Klebsiella pneumoniae

characteristic: organism

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: human

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text: pneumoniae

value: cefoxitin

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value: cefotaxime

value: ciprofloxacin

value: tigecycline

value: EUCAST

value: polymyxin B

value: ceftazidime

value: doripenem


text: Flinders University

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Australia: Adelaide, Rapid Bay Jetty

text: Halichondria sp.

characteristic: isolate

text: sea water

text: sponge metagenome

text: Marine Sponge H.-1

characteristic: title


text: Flinders University

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: SRA accession

text: Australia: Adelaide, Rapid Bay Jetty

text: Halichondria sp.

characteristic: host

text: sea water

text: sponge metagenome

text: Marine Sponge H.-2


characteristic: External Id

text: Flinders University

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: Australia: Adelaide, Rapid Bay Jetty

text: Halichondria sp.

text: sea water

text: sponge metagenome

text: Marine Sponge H.-3


text: Flinders University

text: live

text: Metagenome or environmental

text: Australia: Adelaide, Rapid Bay Jetty

text: Halichondria sp.

text: sea water

text: sponge metagenome

text: Marine Sponge H.-4


text: Flinders University

text: live

text: Metagenome or environmental

text: Australia: Adelaide, Rapid Bay Jetty

text: Halichondria sp.

text: sea water

text: sponge metagenome

text: Marine Sponge H.-5


text: Flinders University

text: live

text: Metagenome or environmental

text: Australia: Adelaide, Rapid Bay Jetty

text: Aplysina sp.

text: sea water

text: sponge metagenome

text: Marine Sponge A.-1


text: Flinders University

text: live

text: Metagenome or environmental

text: Australia: Adelaide, Rapid Bay Jetty

text: Aplysina sp.

text: sea water

text: sponge metagenome

text: Marine Sponge A.-2


text: Flinders University

text: live

text: Metagenome or environmental

text: Australia: Adelaide, Rapid Bay Jetty

text: Aplysina sp.

text: sea water

text: sponge metagenome

text: Marine Sponge A.-3


text: Flinders University

text: live

text: Metagenome or environmental

text: Australia: Adelaide, Rapid Bay Jetty

text: Aplysina sp.

text: sea water

text: sponge metagenome

text: Marine Sponge A.-4


text: Flinders University

text: live

text: Metagenome or environmental

text: Australia: Adelaide, Rapid Bay Jetty

text: Aplysina sp.

text: sea water

text: sponge metagenome

text: Marine Sponge A.-5


text: Flinders University

text: live

text: Metagenome or environmental

text: Australia: Adelaide, Rapid Bay Jetty

text: Igernella sp.

text: sea water

text: sponge metagenome

text: Marine Sponge I.-1


text: Flinders University

text: live

text: Metagenome or environmental

text: Australia: Adelaide, Rapid Bay Jetty

text: Igernella sp.

text: sea water

text: sponge metagenome

text: Marine Sponge I.-2


text: Flinders University

text: live

text: Metagenome or environmental

text: Australia: Adelaide, Rapid Bay Jetty

text: Igernella sp.

text: sea water

text: sponge metagenome

text: Marine Sponge I.-3


text: Flinders University

text: live

text: Metagenome or environmental

text: Australia: Adelaide, Rapid Bay Jetty

text: Igernella sp.

text: sea water

text: sponge metagenome

text: Marine Sponge I.-4


text: Flinders University

text: live

text: Metagenome or environmental

text: Australia: Adelaide, Rapid Bay Jetty

text: Igernella sp.

text: sea water

text: sponge metagenome

text: Marine Sponge I.-5


text: Flinders University

text: live

text: Metagenome or environmental

text: Australia: Adelaide, Rapid Bay Jetty

text: Tedania sp.

text: sea water

text: sponge metagenome

text: Marine Sponge T.-1


text: Flinders University

text: live

text: Metagenome or environmental

text: Australia: Adelaide, Rapid Bay Jetty

text: Tedania sp.

text: sea water

text: sponge metagenome

text: Marine Sponge T.-2


text: Flinders University

text: live

text: Metagenome or environmental

text: Australia: Adelaide, Rapid Bay Jetty

text: Tedania sp.

text: sea water

text: sponge metagenome

text: Marine Sponge T.-3


text: Flinders University

text: live

text: Metagenome or environmental

text: Australia: Adelaide, Rapid Bay Jetty

text: Tedania sp.

text: sea water

text: sponge metagenome

text: Marine Sponge T.-4


text: Flinders University

text: live

text: Metagenome or environmental

text: Australia: Adelaide, Rapid Bay Jetty

text: Tedania sp.

text: sea water

text: sponge metagenome

text: Marine Sponge T.-5


text: Dalian University

text: live

text: MIGS.ba

text: free living

text: Mei-Yu Li

text: not collected

characteristic: density

text: 0 m

characteristic: depth

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Pickle

text: Northeastern sauerkraut

text: Water

text: 3.28 Mb

text: not collected

text: China:Dalian

text: not collected

text: Mei-Yu Li

text: Water

text: not collected

text: 38.92 N 121.62 E

text: not collected

text: Lactobacillus sp. LMY-20

text: anaerobic

characteristic: ph

text: not collected

text: facultative

text: cell culture

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Lactobacillus sp. LMY-20

text: chemoautotroph


Nocardia sp. YIM PH 21724

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: China

characteristic: geo loc name

text: soil

characteristic: isolation source

text: Nocardia panacis

characteristic: organism

text: Whole organism

characteristic: sample type

text: YIM PH 21724

text: Microbe sample from Nocardia panacis

text: type material of Nocardia panacis

characteristic: type-material


name: Earthworm symbiont Verminephrobacter aporrectodeae AtM5-05

text: Aarhus University

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

text: MIGS/MIMS/MIMARKS.host-associated

characteristic: NCBI submission package

text: Keywords: GSC:MIxS;MIGS:6.0

text: soil

text: garden

text: soil

text: Denmark: Aarhus, Maarslet

text: Aporrectodea tuberculata

text: PMID: 27040820

text: nephridia

text: 56.0693 N 10.1608 E

text: PMID: 27040820

text: tuberculatae

text: MIGS Cultured Bacterial/Archaeal sample from Verminephrobacter aporrectodeae subsp. tuberculatae

characteristic: title


name: Earthworm symbiont Verminephrobacter aporrectodeae AtM6-40

characteristic: External Id

text: Aarhus University

characteristic: INSDC last update

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.host-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: soil

text: garden

text: soil

text: Denmark: Aarhus, Maarslet

text: Aporrectodea tuberculata

characteristic: host

text: PMID: 27040820

text: nephridia

text: 56.0693 N 10.1608 E

text: Verminephrobacter aporrectodeae subsp. tuberculatae

text: PMID: 27040820

text: tuberculatae


name: Earthworm symbiont Verminephrobacter eiseniae EaCA1-2

text: Aarhus University

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.host-associated

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: soil

text: garden

text: soil

text: Denmark: Aarhus

text: Eisenia andrei

text: PMID: 27040820

text: nephridia

text: 56.1629 N 10.2039 E

text: Verminephrobacter eiseniae

text: PMID: 27040820

text: MIGS Cultured Bacterial/Archaeal sample from Verminephrobacter eiseniae


name: Earthworm symbiont Verminephrobacter eiseniae EaCA2-5

text: Aarhus University

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.host-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: soil

text: garden

text: soil

text: Denmark: Aarhus

text: Eisenia andrei

text: PMID: 27040820

text: nephridia

text: 56.1629 N 10.2039 E

text: Verminephrobacter eiseniae

text: PMID: 27040820

characteristic: strain


name: Earthworm symbiont Verminephrobacter eiseniae EaM2-7

text: Aarhus University

characteristic: INSDC first public

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.host-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: soil

text: garden

text: soil

text: Denmark: Aarhus, Maarslet

text: Eisenia andrei

text: PMID: 27040820

text: nephridia

text: 56.0693 N 10.1608 E

text: Verminephrobacter eiseniae

text: PMID: 27040820


name: Earthworm symbiont Verminephrobacter eiseniae EaM3-08

text: Aarhus University

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.host-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: soil

text: garden

text: soil

text: Denmark: Aarhus, Maarslet

text: Eisenia andrei

text: PMID: 27040820

text: nephridia

text: 56.0693 N 10.1608 E

text: Verminephrobacter eiseniae

text: PMID: 27040820


name: Earthworm symbiont Verminephrobacter eiseniae EaM3-09

text: Aarhus University

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.host-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: soil

text: garden

text: soil

text: Denmark: Aarhus, Maarslet

text: Eisenia andrei

text: PMID: 27040820

text: nephridia

text: 56.0693 N 10.1608 E

text: Verminephrobacter eiseniae

text: PMID: 27040820


name: Earthworm symbiont Verminephrobacter eiseniae EfG2-21

text: Aarhus University

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.host-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: soil

text: garden

text: soil

text: Germany: Bayreuth

text: Eisenia fetida

text: PMID: 27040820

text: nephridia

text: 49.9456 N 11.5713 E

text: Verminephrobacter eiseniae

text: PMID: 27040820


text: University of Washington

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

characteristic: SRA accession

characteristic: collection date

text: Pacific Ocean

text: seawater

text: 23.5 N 158 W

characteristic: lat lon

text: seawater metagenome

text: Niskin

text: between 3.0 and 200 microns

characteristic: size fraction

text: Gradients1.0_nonselected_metatranscriptome_S02_3.0um


text: University of Washington

text: live

text: Metagenome or environmental

text: Pacific Ocean

characteristic: geo loc name

text: seawater

characteristic: isolation source

text: 28.13 N 158 W

text: seawater metagenome

characteristic: organism

text: Niskin

text: between 0.2 and 3.0 microns

text: Gradients1.0_nonselected_metatranscriptome_S04_0.2um


text: University of Washington

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

text: Pacific Ocean

text: seawater

text: 28.13 N 158 W

text: seawater metagenome

text: Niskin

text: between 3.0 and 200 microns

text: Gradients1.0_nonselected_metatranscriptome_S04_3.0um


characteristic: External Id

text: University of Washington

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Pacific Ocean

text: seawater

text: 32.58 N 158 W

text: seawater metagenome

text: Niskin

text: between 0.2 and 3.0 microns

text: Gradients1.0_nonselected_metatranscriptome_S06_0.2um

characteristic: title


text: University of Washington

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: Pacific Ocean

text: seawater

text: 32.58 N 158 W

text: seawater metagenome

text: Niskin

text: between 3.0 and 200 microns

text: Gradients1.0_nonselected_metatranscriptome_S06_3.0um


text: University of Washington

text: live

text: Metagenome or environmental

text: Pacific Ocean

text: seawater

text: 37.3 N 158 W

text: seawater metagenome

text: Niskin

text: between 0.2 and 3.0 microns

text: Gradients1.0_nonselected_metatranscriptome_S08_0.2um


text: University of Washington

text: live

text: Metagenome or environmental

text: Pacific Ocean

text: seawater

text: 37.3 N 158 W

text: seawater metagenome

text: Niskin

text: between 3.0 and 200 microns

text: Gradients1.0_nonselected_metatranscriptome_S08_3.0um


text: University of Washington

text: live

text: Metagenome or environmental

text: Pacific Ocean

text: seawater

text: 36.57 N 158 W

text: seawater metagenome

text: Niskin

text: between 0.2 and 3.0 microns

text: Gradients1.0_nonselected_metatranscriptome_S09_0.2um


text: University of Washington

text: live

text: Metagenome or environmental

text: Pacific Ocean

text: seawater

text: 36.57 N 158 W

text: seawater metagenome

text: Niskin

text: between 3.0 and 200 microns

text: Gradients1.0_nonselected_metatranscriptome_S09_3.0um


text: University of Washington

text: live

text: Metagenome or environmental

text: Pacific Ocean

text: seawater

text: 36.58 N 158 W

text: seawater metagenome

text: Niskin

text: between 0.2 and 3.0 microns

text: Gradients1.0_nonselected_metatranscriptome_S11_0.2um


text: University of Washington

text: live

text: Metagenome or environmental

text: Pacific Ocean

text: seawater

text: 36.58 N 158 W

text: seawater metagenome

text: Niskin

text: between 3.0 and 200 microns

text: Gradients1.0_nonselected_metatranscriptome_S11_3.0um


text: University of Washington

text: live

text: Metagenome or environmental

text: Pacific Ocean

text: seawater

text: 33.09 N 158 W

text: seawater metagenome

text: Niskin

text: between 0.2 and 3.0 microns

text: Gradients1.0_nonselected_metatranscriptome_S12_0.2um


text: University of Washington

text: live

text: Metagenome or environmental

text: Pacific Ocean

text: seawater

text: 33.09 N 158 W

text: seawater metagenome

text: Niskin

text: between 3.0 and 200 microns

text: Gradients1.0_nonselected_metatranscriptome_S12_3.0um


text: University of Washington

text: live

text: Metagenome or environmental

text: Pacific Ocean

text: seawater

text: 29.7 N 158 W

text: seawater metagenome

text: Niskin

text: between 0.2 and 3.0 microns

text: Gradients1.0_nonselected_metatranscriptome_S13_0.2um


text: University of Washington

text: live

text: Metagenome or environmental

text: Pacific Ocean

text: seawater

text: 29.7 N 158 W

text: seawater metagenome

text: Niskin

text: between 3.0 and 200 microns

text: Gradients1.0_nonselected_metatranscriptome_S13_3.0um


text: University of Washington

text: live

text: Metagenome or environmental

text: Pacific Ocean

text: seawater

text: 26.28 N 158 W

text: seawater metagenome

text: Niskin

text: between 0.2 and 3.0 microns

text: Gradients1.0_nonselected_metatranscriptome_S14_0.2um


text: University of Washington

text: live

text: Metagenome or environmental

text: Pacific Ocean

text: seawater

text: 26.28 N 158 W

text: seawater metagenome

text: Niskin

text: between 3.0 and 200 microns

text: Gradients1.0_nonselected_metatranscriptome_S14_3.0um


text: The University of Melbourne

text: live

text: Pathogen.env

text: S.J. Pethybridge

text: Colletotrichum tanaceti is a foliar fungal pathogen of commercially grown pyrethrum (Tanacetum cinerariifolium)

characteristic: description

text: Australia:Tasmania, Ulverstone

text: Tanacetum cinerariifolium

characteristic: host

text: leaves

text: 41.1703 S 146.1872 E

text: Colletotrichum tanaceti

characteristic: strain

text: Pathogen: environmental/food/other sample from Colletotrichum tanaceti


characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: China: Shandong Province

text: saline soil

characteristic: isolate

text: isolated from saline soil sample collected from Shandong Province, China

text: Photobacterium salinisoli

text: cell culture

characteristic: sample type

text: Microbe sample from Photobacterium salinisoli

text: type material of Photobacterium salinisoli

characteristic: type material


text: live

text: Microbe, viral or environmental

characteristic: collection date

text: China: Shandong Province, Lingxian County

characteristic: geo loc name

text: saline soil

text: Photobacterium salinisoli

text: cell culture


Strain CECT 8783

text: Newcastle University

text: live

text: Microbe, viral or environmental

text: China: Yanna province

text: Plant

text: Mycolicibacterium stellerae

characteristic: organism

text: Plant

text: CECT 8783

text: Microbe sample from Mycolicibacterium stellerae

text: type strain of Mycolicibacterium stellerae


tag: Namespace:DOE Joint Genome Institute

text: Host-associated | Fungi | Mycelium | Unclassified | Unclassified

characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: Australia: Sydney

text: Free living mycelium

characteristic: isolation source

text: 33.8688 S 151.2093 E

characteristic: lat lon

text: fungus metagenome

text: Metatranscriptome of Pisolithus albus SI12 free living mycelium from Australia - SI12_FLM_lowgluc_1


characteristic: External Id

text: DOE Joint Genome Institute

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

text: Australia: Sydney

text: Free living mycelium

text: 33.8688 S 151.2093 E

text: fungus metagenome

text: Metatranscriptome of Pisolithus albus SI12 free living mycelium from Australia - SI12_FLM_lowgluc_3

characteristic: title


text: DOE Joint Genome Institute

characteristic: INSDC first public

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Australia: Sydney

text: Free living mycelium

text: 33.8688 S 151.2093 E

text: fungus metagenome

text: Metatranscriptome of Pisolithus albus SI12 free living mycelium from Australia - SI12_FLM_lowgluc_2


text: Harvard University

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the hot springs metagenome BioSamples: SAMN10130912, SAMN10130913, SAMN10130914, and SAMN10130915

characteristic: derived-from

characteristic: environmental sample

text: Japan: Tokyo Prefecture, Shikinejima Island, Jinata Onsen

characteristic: isolate

text: iron-rich hot spring

text: 34.318 N 139.216 E

text: hot springs metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Planctomycetota bacterium

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Planctomycetota bacterium


characteristic: INSDC secondary accession

text: live

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: carolinensis

characteristic: ecotype

text: Humid forest

characteristic: env biome

text: Pius forest

characteristic: env feature

text: Air

text: 1.1 Gb

characteristic: estimated size

text: USA: Mount Lake Biological Station, Virginia

characteristic: geo loc name

text: 37.378214 N 80.528099 W

text: Junco hyemalis

characteristic: organism

text: diploid

characteristic: ploidy

text: eukaryote: sexual

characteristic: propagation

characteristic: specimen-voucher

text: MIGS Eukaryotic sample from Junco hyemalis


name: mixed phages of Salmonella, Klebsiella, Rhodococcus

characteristic: External Id

text: Texas A&M University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Viral

characteristic: NCBI submission model

characteristic: SRA accession

text: USA: Texas

text: mixed isolates

text: mixed environmental samples

characteristic: isolation source

text: Caudoviricetes

text: Viral sample from Caudoviricetes

characteristic: title


text: multi-ingredient| other (flavoring or seasoning)| seeded vegetables (legumes)| vegetables

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC secondary accession

text: live

characteristic: PublicAccession

text: environmental/food/other

text: FDA

characteristic: collected by

characteristic: collection date

characteristic: fda lab id

text: Salmonella

characteristic: genus

text: India

text: lentil vegetable seasoning curry

text: curry (dish):FOODON_03306648| lentil vegetable food product:FOODON_00001997| seasoning:FOODON_03301189

characteristic: ontological term

text: Salmonella enterica

text: GenomeTrakr

characteristic: project name

text: United States Food and Drug Administration|Office of Regulatory Affairs|San Francisco Laboratory

characteristic: sequenced by

text: food

characteristic: source type

text: enterica

characteristic: species

characteristic: strain

text: Pathogen: environmental/food/other sample from Salmonella enterica


text: FDA Contracted Laboratory

characteristic: Collected by

characteristic: External Id

text: beef

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

characteristic: Isolate name alias

characteristic: Strain

text: Escherichia

text: USA:FL

characteristic: geo loc name

text: ground beef

text: ground beef food product:FOODON_00001282

text: Escherichia coli O45

characteristic: organism

text: food

text: coli

text: Pathogen: environmental/food/other sample from Escherichia coli O45


text: FDA Contracted Laboratory

text: meat

characteristic: IFSAC Category

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: PublicAccession

characteristic: collection date

text: Escherichia

characteristic: genus

text: USA:FL

text: meat

characteristic: isolation source

text: meat food product:FOODON_00001006

text: Escherichia coli O26

text: food

text: coli

text: Pathogen: environmental/food/other sample from Escherichia coli O26

characteristic: title


text: FDA Contracted Laboratory

characteristic: Collected by

characteristic: External Id

text: multi-ingredient, root/underground (tubers)

text: live

text: Pathogen.env

text: Escherichia

text: USA:OR

text: potato salad

text: potato salad:FOODON_03304708

characteristic: ontological term

text: Escherichia coli O157

text: food

characteristic: source type

text: coli

characteristic: species

text: Pathogen: environmental/food/other sample from Escherichia coli O157


text: Ningbo University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: SRA accession

characteristic: age

text: Scylla paramamosain

text: pooled male and female

characteristic: sex

characteristic: strain

text: intestinal tract

characteristic: tissue

text: Model organism or animal sample from Scylla paramamosain


sponge specimen

text: Xiamen Medical College

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: 20 m

characteristic: depth

text: Altererythrobacter sp. HN-Y73 from sponge

characteristic: description

text: China: Yangpu Bay, Hainan

characteristic: geo loc name

text: marine sponge

characteristic: host

text: Lingping Zhuang

characteristic: identified by

text: 19.68 N 109.1 E

characteristic: lat lon

text: Altererythrobacter sp. HN-Y73 (=LMG 30461= MCCC 1K03324)

characteristic: note

text: Altericroceibacterium spongiae

characteristic: organism

text: marine sponge

characteristic: sample type

text: type strain of Altererythrobacter spongiae

characteristic: type material


characteristic: External Id

text: KAUST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: 0.1 m

text: 10 m

characteristic: elev

text: Upflow Column Bioreactor

characteristic: env biome

text: Marine water Bioreactor

characteristic: env feature

text: Biofilm on non-woven sheet

characteristic: environmental sample

text: Saudi Arabia: KAUST

characteristic: isolate

text: marine water anammox upflow column reactor biofilm on non-woven sheet

characteristic: isolation source

text: 22.307430 N 39.122179 E

text: bioreactor metagenome

characteristic: metagenome source

text: true

characteristic: metagenomic

text: This BioSample is a metagenomic assembly obtained from the bioreactor metagenome BioSample: SAMN10124294

text: Planctomycetota bacterium

text: metagenomic assembly

text: Anammox Marinewater reactor

characteristic: title


M. hominis 35

text: USC EA3671 IHMC

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Bordeaux University Hospital (France)

characteristic: collected by

characteristic: collection date

text: France: Bordeaux

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: Neonatal fever

characteristic: host disease

text: Clinical

text: Blood culture

text: 44.83 N 0.61 W

characteristic: lat lon

text: Metamycoplasma hominis

characteristic: organism

characteristic: strain

text: Pathogen: clinical or host-associated sample from Metamycoplasma hominis


M. hominis 331

characteristic: External Id

text: USC EA3671 IHMC

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.cl

text: Bordeaux University Hospital (France)

text: France: Bordeaux

text: Homo sapiens

text: Psoriatic arthritis

text: Clinical

characteristic: isolate

text: Joint fluid

text: 44.83 N 0.61 W

text: Metamycoplasma hominis


M. hominis 2477

text: USC EA3671 IHMC

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: NCBI submission model

text: Bordeaux University Hospital (France)

text: France: Paris

text: Homo sapiens

text: Respiratory disease

text: Clinical

text: tracheal aspiration

characteristic: isolation source

text: 48.85 N 2.31 W

text: Metamycoplasma hominis

characteristic: title


M. hominis 2674

text: USC EA3671 IHMC

text: live

text: Pathogen.cl

characteristic: NCBI submission package

characteristic: SRA accession

text: Bordeaux University Hospital (France)

characteristic: collected by

characteristic: collection date

text: France: Paris

text: Homo sapiens

text: Mediastinitis

text: Clinical

text: Pus mediastinal

text: 48.85 N 2.31 W

text: Metamycoplasma hominis


M. hominis 3299

text: USC EA3671 IHMC

text: live

text: Pathogen.cl

text: Bordeaux University Hospital (France)

text: France: Bordeaux

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: Osteoarthritis

characteristic: host disease

text: Clinical

text: Joint fluid

text: 44.83 N 0.61 W

characteristic: lat lon

text: Metamycoplasma hominis


M. hominis 3364

characteristic: External Id

text: USC EA3671 IHMC

characteristic: INSDC center name

text: live

text: Pathogen.cl

text: Bordeaux University Hospital (France)

text: France: Paris

text: Homo sapiens

text: Arthritis

text: Clinical

text: Joint fluid

text: 48.85 N 2.31 W

text: Metamycoplasma hominis

characteristic: organism

characteristic: strain


M. hominis 3631

text: USC EA3671 IHMC

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.cl

text: Bordeaux University Hospital (France)

text: France: Bordeaux

text: Homo sapiens

text: Endometritis

text: Clinical

characteristic: isolate

text: Amniotic liquid

text: 44.83 N 0.61 W

text: Metamycoplasma hominis


M. hominis 4016

text: USC EA3671 IHMC

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: NCBI submission model

text: Bordeaux University Hospital (France)

text: France: Lannion

text: Homo sapiens

text: endometritis

text: Clinical

text: Endometrial biopsy

characteristic: isolation source

text: 48.72 N 3.46 W

text: Metamycoplasma hominis

characteristic: title


M. hominis 4235

text: USC EA3671 IHMC

text: live

text: Pathogen.cl

characteristic: NCBI submission package

characteristic: SRA accession

text: Bordeaux University Hospital (France)

characteristic: collected by

characteristic: collection date

text: France: Bordeaux

text: Homo sapiens

text: Salpingitis

text: Clinical

text: Peritoneal fluid

text: 44.83 N 0.61 W

text: Metamycoplasma hominis


M. hominis 4788

text: USC EA3671 IHMC

text: live

text: Pathogen.cl

text: Bordeaux University Hospital (France)

text: France: Bordeaux

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: Vaginosis

characteristic: host disease

text: Clinical

text: Vaginal secretions

text: 44.83 N 0.61 W

characteristic: lat lon

text: Metamycoplasma hominis


M. hominis 4796

characteristic: External Id

text: USC EA3671 IHMC

characteristic: INSDC center name

text: live

text: Pathogen.cl

text: Bordeaux University Hospital (France)

text: France: Paris

text: Homo sapiens

text: Absess following kidney transplantation

text: Clinical

text: kidney

text: 48.85 N 2.31 W

text: Metamycoplasma hominis

characteristic: organism

characteristic: strain


M. hominis 5012

text: USC EA3671 IHMC

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.cl

text: Bordeaux University Hospital (France)

text: France: Bordeaux

text: Homo sapiens

text: Commensal

text: Clinical

characteristic: isolate

text: Sperm

text: 44.83 N 0.61 W

text: Metamycoplasma hominis


M. hominis 5060

text: USC EA3671 IHMC

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: NCBI submission model

text: Bordeaux University Hospital (France)

text: France: Bordeaux

text: Homo sapiens

text: Vaginosis

text: Clinical

text: Vaginal secretions

characteristic: isolation source

text: 44.83 N 0.61 W

text: Metamycoplasma hominis

characteristic: title


M. hominis 5096

text: USC EA3671 IHMC

text: live

text: Pathogen.cl

characteristic: NCBI submission package

characteristic: SRA accession

text: Bordeaux University Hospital (France)

characteristic: collected by

characteristic: collection date

text: France: Bordeaux

text: Homo sapiens

text: Maternal-fetal infection

text: Clinical

text: Placental debris

text: 44.83 N 0.61 W

text: Metamycoplasma hominis


text: University of Michigan

text: live

text: Plant

text: sprout

characteristic: dev stage

text: Salmonopuntia salmiana

text: tissue sample

characteristic: sample type

text: DBG 2001-0048-01-1 G

characteristic: specimen voucher

text: shoot

characteristic: tissue

text: Plant sample from Salmonopuntia salmiana


CVM N17S242

characteristic: External Id

text: FDA-CVM

characteristic: INSDC center name

text: live

text: USA

text: FDA

text: Salmonella

characteristic: genus

text: USA:NM

characteristic: geo loc name

text: other (non-clinical isolate)

characteristic: host

text: CVM N17S242

text: Chicken thighs

text: Salmonella enterica

characteristic: organism

text: SI 4,12::(rough)

characteristic: serotype

text: CVM N17S242

characteristic: strain

value: broth dilution

value: mg/L

value: Sensititre

value: susceptible

value: Salmonella enterica

value: tetracycline

value: ampicillin

value: azithromycin

value: gentamicin

value: streptomycin

value: chloramphenicol

value: sulfisoxazole

value: nalidixic acid

value: meropenem

value: trimethoprim-sulfamethoxazole


SI 2016

text: Queensland Health Forensic and Scientific Services

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Viral

characteristic: NCBI submission model

text: Solomon Islands

text: Homo sapiens

text: SI 2016

characteristic: isolate

text: Human serum

characteristic: isolation source

text: Aedes albopictus C6/36 cells

characteristic: lab host

text: Dengue virus type 2

text: Viral sample from Dengue virus type 2

characteristic: title


Van 2017

characteristic: External Id

text: live

text: Viral

characteristic: SRA accession

characteristic: collection date

text: Vanuatu

text: Homo sapiens

text: Van 2017

text: Human serum

text: Aedes albopictus C6/36 cells

text: Dengue virus type 2

text: Viral sample from Dengue virus type 2


P. vittata Mix Samples

text: Institute of Botany, CAS

characteristic: INSDC center name

text: live

text: Plant

characteristic: NCBI submission package

text: China

text: Pteris vittata

text: frond, root and gametophyte

characteristic: tissue

text: Plant sample from Pteris vittata

text: As(III) and As(V) for 24 h

characteristic: treatment


CKF

text: Institute of Botany, CAS

text: live

text: Plant

text: China

text: Pteris vittata

characteristic: organism

text: frond

text: Plant sample from Pteris vittata


CKR

text: Institute of Botany, CAS

characteristic: INSDC first public

text: live

text: Plant

text: China

text: Pteris vittata

text: root

text: Plant sample from Pteris vittata


text: Oxford University Clinical Research Unit

characteristic: INSDC last update

text: live

text: Pathogen.cl

text: Tahmina Akther

characteristic: collected by

characteristic: genotype

text: Bangladesh: Dahka

characteristic: geo loc name

text: Homo sapiens

characteristic: host

characteristic: host age

text: Hepatitis E infection

characteristic: host disease

text: female

characteristic: host sex

text: Plasma

text: Plasma from HEV IgM positive patient

text: 23.42 N 90.22 E

characteristic: lat lon

text: Paslahepevirus balayani

characteristic: subtype

text: HEV


characteristic: External Id

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

text: Tahmina Akther

characteristic: collection date

text: Bangladesh: Dahka

text: Homo sapiens

text: Hepatitis E infection

text: male

text: Plasma

characteristic: isolate

text: Plasma from HEV IgM positive patient

characteristic: isolation source

text: 23.42 N 90.22 E

text: Paslahepevirus balayani

text: HEV

characteristic: title


name: Draft genome sequence of Pseudomonas balearica SAGV3-2SA2 = CCUG 72049

text: University of Gothenburg - CCUG

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: Degradation of aromatic compounds

characteristic: Properties of interest

characteristic: SRA accession

characteristic: culture collection

text: Chile: Biobio Region

text: Activated sludge from wastewater plant

text: Stutzerimonas balearica

characteristic: organism

text: Bacterial strain

characteristic: sample type

characteristic: strain

text: Microbe sample from Stutzerimonas balearica


characteristic: External Id

text: Bonasio, Cell and Developmental Biology, University of Pennsylvania

text: live

characteristic: INSDC status

text: Generic

text: GST-RH-delta-Mnase

characteristic: fusion protein

text: Homo sapiens

text: MapR

characteristic: technology


text: live

text: Generic

characteristic: NCBI submission model

text: GST-RH-delta-MNase

text: Homo sapiens

text: MapR

text: Actinomycin D

characteristic: treatment


characteristic: INSDC center name

text: live

text: Generic

text: FLAG

characteristic: antibody

text: Homo sapiens

text: CUT&RUN

characteristic: title

text: RH-delta-mSA-FLAG

characteristic: transgene


characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

text: IgG

text: Homo sapiens

text: CUT&RUN

text: RH-delta-mSA-FLAG


text: live

text: Generic

characteristic: SRA accession

text: GST-MNase

text: Homo sapiens

characteristic: organism

text: MapR

text: Rnase H


text: live

text: Generic

text: GST-RH-delta-MNase

text: Homo sapiens

text: MapR

text: Rnase H


text: live

text: Generic

text: GST-MNase

text: Homo sapiens

text: MapR


text: live

text: Generic

text: GST-RH-delta-MNase

text: Homo sapiens

text: MapR


text: live

text: Generic

text: GST-MNase

text: Homo sapiens

text: MapR

text: Actinomycin D


text: live

text: Generic

text: GST-MNase

text: Homo sapiens

text: MapR

text: RNAse H


text: live

text: Generic

text: GST-RH-delta-MNase

text: Homo sapiens

text: MapR

text: RNAse H


text: veterinary clinical/research, other animal

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

text: live

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: TGEN

characteristic: collected by

characteristic: collection date

text: Escherichia

characteristic: genus

text: USA:AZ

characteristic: geo loc name

text: Stool (Castor canadensis)

characteristic: isolation source

text: castor:NCBITAXON_10184, feces:UBERON_0001988

characteristic: ontological term

text: Escherichia coli

text: animal

characteristic: source type

text: coli

characteristic: species

characteristic: strain

text: Pathogen: environmental/food/other sample from Escherichia coli


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: TGEN

text: Escherichia

text: USA:AZ

text: Stool (Castor canadensis)

text: Escherichia coli

text: animal

text: coli

characteristic: title


text: Ningbo University

text: live

text: Model organism or animal

characteristic: NCBI submission package

characteristic: age

text: Scylla paramamosain

characteristic: organism

text: pooled male and female

characteristic: sex

text: intestinal tract

characteristic: tissue


name: Draft genome sequence of Pseudomonas stutzeri HMF2 (genomovar 1)

characteristic: Genomovar

text: University of Gothenburg - CCUG

text: live

text: Microbe, viral or environmental

text: Degradation of aromatic compounds

characteristic: Properties of interest

text: Chile: Biobio Region

text: Mineral medium with furans and aromatics as carbon source

text: activated sludge from treatment plant for pulp mills effluent

text: Stutzerimonas stutzeri

text: Bacterial strain

text: Microbe sample from Stutzerimonas stutzeri


name: Draft genome sequence of Pseudomonas stutzeri 4MP-B (genomovar 1)

text: University of Gothenburg - CCUG

text: live

text: Microbe, viral or environmental

text: Degradation of aromatic compounds

text: Chile: Santiago de Chile

text: Activated sludge from wastewater plant

text: Stutzerimonas stutzeri

text: Bacterial strain


name: Draft genome sequence of Pseudomonas stutzeri 3MP-B (genomovar 4)

text: University of Gothenburg - CCUG

text: live

text: Microbe, viral or environmental

text: Degradation of aromatic compounds

text: Chile: Santiago de Chile

text: Activated sludge from wastewater plant

text: Stutzerimonas stutzeri

text: Bacterial strain


Pectobacterium carotovorum HG-49

text: Huazhong University of Science and Technology

text: live

text: Microbe, viral or environmental

text: China: Xianning city

text: Boehmeria nivea

characteristic: host

text: rizosphere of ramie plants

text: Pectobacterium carotovorum

text: rhizosphere soil

text: Microbe sample from Pectobacterium carotovorum


text: Nankai University

characteristic: INSDC secondary accession

text: live

text: Invertebrate

characteristic: SRA accession

characteristic: collection date

text: China

characteristic: geo loc name

text: Ficus racemosa

text: figwasp

characteristic: isolate

text: Ceratosolen fusciceps

text: whole insect

text: Invertebrate sample from Ceratosolen fusciceps


characteristic: External Id

text: Nankai University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Invertebrate

text: China

text: Ficus racemosa

text: figwasp

text: Ceratosolen fusciceps

text: whole insect


text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Tahmina Akther

characteristic: collected by

characteristic: genotype

text: Bangladesh: Dahka

text: Homo sapiens

characteristic: host age

text: Hepatitis E infection

characteristic: host disease

text: female

characteristic: host sex

text: Plasma

text: Plasma from HEV IgM positive patient

characteristic: isolation source

text: 23.42 N 90.22 E

characteristic: lat lon

text: Paslahepevirus balayani

characteristic: subtype

text: HEV

characteristic: title


text: live

text: Pathogen.cl

text: Tahmina Akther

characteristic: collection date

text: Bangladesh: Dahka

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: Hepatitis E infection

text: male

text: Plasma

characteristic: isolate

text: Plasma from HEV IgM positive patient

text: 23.42 N 90.22 E

text: Paslahepevirus balayani

characteristic: organism

text: HEV


R

characteristic: External Id

text: Guizhou University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Plant

characteristic: SRA accession

text: seven years

characteristic: age

text: zihonglong

characteristic: cultivar

text: before coloring (22 days post-anthesis) (DPA), color initiation (25 DPA), coloring (28 DPA) and maturity (30 DPA).

characteristic: dev stage

text: zihonglong

characteristic: ecotype

text: China: Guizhou Province, Luodian County

text: pitaya with red pulp

text: Selenicereus monacanthus

text: pulp

characteristic: tissue

text: Plant sample from Selenicereus monacanthus


Serratia marcescens

text: Texas A&M - Corpus Christi

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Serratia marcescens strain isolated from a whitepox outbreak affecting Acropora palmata in the Florida Keys.

characteristic: description

text: Whitepox outbreak in Acropora palmata in the Florida Keys

characteristic: env biome

text: USA:Florida,Key Largo

text: Solenastrea bournoni

text: marine

characteristic: isolation source

text: Serratia marcescens

text: environmental isolate

characteristic: sample type

text: Serratia marcescens EL108

characteristic: title


characteristic: External Id

text: The University of Auckland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Viral

text: New Zealand: Auckland

characteristic: geo loc name

text: Aspergillus thermomutatus

characteristic: host

characteristic: isolate

text: Middlemore hospital

text: A. thermomutatus

characteristic: lab host

text: Betachrysovirus aspergilli

characteristic: organism

text: 454 reads from dsRNA


Pseudomonas sp. T3

text: Chinese Academy of Agricultural Sciences

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: China

text: soil

text: [Pseudomonas] urumqiensis

text: mixed culture

characteristic: strain

text: Microbe sample from [Pseudomonas] urumqiensis

text: type strain of Pseudomonas urumqiensis

characteristic: type material


name: Earthworm symbiont Verminephrobacter aporrectodeae AtG1-5

text: Aarhus University

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.host-associated

characteristic: NCBI submission package

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: soil

text: garden

text: soil

text: Germany: Bayreuth

text: Aporrectodea tuberculata

text: PMID: 27040820

text: nephridia

text: 49.9456 N 11.5713 E

text: PMID: 27040820

text: tuberculatae

text: MIGS Cultured Bacterial/Archaeal sample from Verminephrobacter aporrectodeae subsp. tuberculatae


name: Earthworm symbiont Verminephrobacter aporrectodeae AtG3-12

text: Aarhus University

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.host-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: soil

text: garden

text: soil

text: Germany: Bayreuth

text: Aporrectodea tuberculata

text: PMID: 27040820

text: nephridia

text: 49.9456 N 11.5713 E

text: Verminephrobacter aporrectodeae subsp. tuberculatae

text: PMID: 27040820

text: tuberculatae


name: Earthworm symbiont Verminephrobacter aporrectodeae AtG4-9

text: Aarhus University

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.host-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: soil

text: garden

text: soil

text: Germany: Bayreuth

text: Aporrectodea tuberculata

text: PMID: 27040820

text: nephridia

text: 49.9456 N 11.5713 E

text: PMID: 27040820

text: tuberculatae


name: Earthworm symbiont Verminephrobacter aporrectodeae AtM2-8

text: Aarhus University

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.host-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: soil

text: garden

text: soil

text: Denmark: Aarhus, Maarslet

text: Aporrectodea tuberculata

text: PMID: 27040820

text: nephridia

text: 56.0693 N 10.1608 E

text: PMID: 27040820

text: tuberculatae


name: Earthworm symbiont Verminephrobacter eiseniae EaCA1-1

text: Aarhus University

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.host-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: soil

text: garden

text: soil

text: Denmark: Aarhus

text: Eisenia andrei

text: PMID: 27040820

text: nephridia

text: 56.1629 N 10.2039 E

text: Verminephrobacter eiseniae

text: PMID: 27040820

text: MIGS Cultured Bacterial/Archaeal sample from Verminephrobacter eiseniae


name: Earthworm symbiont Verminephrobacter eiseniae EaCA2-6

text: Aarhus University

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.host-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: soil

text: garden

text: soil

text: Denmark: Aarhus

text: Eisenia andrei

text: PMID: 27040820

text: nephridia

text: 56.1629 N 10.2039 E

text: Verminephrobacter eiseniae

text: PMID: 27040820


name: Earthworm symbiont Verminephrobacter eiseniae EaM2-5

text: Aarhus University

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.host-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: soil

text: garden

text: soil

text: Denmark: Aarhus, Maarslet

text: Eisenia andrei

text: PMID: 27040820

text: nephridia

text: 56.0693 N 10.1608 E

text: Verminephrobacter eiseniae

text: PMID: 27040820


name: Earthworm symbiont Verminephrobacter eiseniae EaM4-10

text: Aarhus University

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.host-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: soil

text: garden

text: soil

text: Denmark: Aarhus, Maarslet

text: Eisenia andrei

text: PMID: 27040820

text: nephridia

text: 56.0693 N 10.1608 E

text: Verminephrobacter eiseniae

text: PMID: 27040820


name: Earthworm symbiont Verminephrobacter eiseniae EaM4-11

text: Aarhus University

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.host-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: soil

text: garden

text: soil

text: Denmark: Aarhus, Maarslet

text: Eisenia andrei

text: PMID: 27040820

text: nephridia

text: 56.0693 N 10.1608 E

text: Verminephrobacter eiseniae

text: PMID: 27040820


text: UC Davis

characteristic: INSDC secondary accession

text: live

text: MIGS.ba

characteristic: SRA accession

characteristic: collection date

characteristic: depth

text: Sequencing, assembly, and annotation of Cupriavidus necator U2, formerly Ralstonia sp. U2, a naphthalene degrader isolated from contaminated sites several decades ago. U2 is from a Venezuelan site with oil contamination.

characteristic: elev

text: Oil-contaminated site

characteristic: env biome

text: Soil

characteristic: env feature

text: soil

text: Venezuela

text: oil-contaminated soil

characteristic: isolation-source

text: 8.21 N 66.12 W

characteristic: lat lon

text: Cupriavidus sp. U2

text: MIGS Cultured Bacterial/Archaeal sample from Cupriavidus necator U2


characteristic: External Id

text: CDC GCWGS

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: CDC

characteristic: collected by

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: gonorrhea

characteristic: host disease

text: pathogen.cl

characteristic: isolation source

text: Neisseria gonorrhoeae

text: GCWGS

characteristic: title


text: Zhejiang Ocean University

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Zhengjiang Ocean University China

characteristic: biomaterial provider

text: Qiao Yang

characteristic: collection date

text: Taiwan: Pingtung Prefecture, Tungkang

text: Alexandrium catenella

text: Nitratireductor alexandrii

characteristic: organism

text: pure culture

characteristic: sample type

characteristic: strain

text: Microbe sample from Nitratireductor alexandrii

text: type material of Nitratireductor alexandrii

characteristic: type material


characteristic: External Id

text: Zhejiang Ocean University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: Zhengjiang Ocean UniversityChina

text: Qiao Yang

text: Taiwan: Pingtung Prefecture, Tungkang

text: Alexandium Catenella

text: culture of toxic marine dinoflagellates Alexandrium sp.

characteristic: isolate

text: Taiwan: Pingtung Prefecture, Tungkang

text: Alexandriicola marinus

text: cell culture

text: Microbe sample from Alexandriicola marinus

text: type strain of Alexandriicola marinus


Seed_Full length

text: Chinese University of Hong Kong

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Plant

characteristic: SRA accession

text: freshly harvest

characteristic: age

text: Nipponbare

characteristic: cultivar

text: mature seeds

text: Japonica

characteristic: ecotype

text: Not collected

text: Oryza sativa Japonica Group

text: Seed

characteristic: tissue

text: Plant sample from Oryza sativa Japonica Group

text: seed full length transcriptome

characteristic: treatment