text: Okinawa Institute of Science and Technology

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Invertebrate

text: K. Peijnenburg

characteristic: collected by

characteristic: depth

text: North Sea

characteristic: isolate

text: plankton sampling

text: 58.19 N 11.32 E

characteristic: lat lon

text: Parasagitta elegans

text: whole animal

characteristic: tissue

text: Invertebrate sample from Parasagitta elegans


status: PUBLIC

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Invertebrate

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: K. Peijnenburg

tag: attribute

characteristic: collection date

text: Atlantic Ocean

characteristic: geo loc name

text: plankton sampling

characteristic: isolation source

text: 46.05 S 44.02 W

text: Pseudosagitta gazellae

characteristic: organism

text: whole animal

text: Invertebrate sample from Pseudosagitta gazellae

characteristic: title


characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Invertebrate

text: K. Peijnenburg

characteristic: collected by

text: Atlantic Ocean

text: plankton sampling

text: 25.43 S 24.59 W

text: Flaccisagitta hexaptera

text: whole animal

text: Invertebrate sample from Flaccisagitta hexaptera


text: live

text: Invertebrate

text: K. Peijnenburg

characteristic: depth

text: Atlantic Ocean

characteristic: isolate

text: plankton sampling

text: 15.03 N 34.28 W

characteristic: lat lon

text: Serratosagitta serratodentata

text: whole animal

text: Invertebrate sample from Serratosagitta serratodentata


characteristic: External Id

characteristic: INSDC center name

text: live

text: Invertebrate

text: K. Peijnenburg

text: North Sea

text: plankton sampling

text: 58.16 N 11.28 E

text: Parasagitta setosa

text: whole animal

characteristic: tissue

text: Invertebrate sample from Parasagitta setosa


Motilimonas pumilus sp. nov

text: Shandong Marine Resource and Environment Research Institute

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: Motilimonas pumilus sp. nov. PLHSC7-2, novel bacteria from gut of sea cucumber

characteristic: description

text: China: Yantai

text: Apostichopus japonicus

characteristic: host

text: gut of sea cucumber

text: Motilimonas pumila

text: cell culture

characteristic: sample type

characteristic: strain

text: Microbe sample from Motilimonas sp. PLHSC7-2

text: type material of Motilimonas pumila

characteristic: type material


text: live

text: Human

characteristic: NCBI submission package

text: 6 year-old

characteristic: age

text: Prof.Yue zhihui,Department of Pediatrics, The First Affiliated Hospital, Sun Yat-sen University

text: Homo sapiens

characteristic: organism

text: male

characteristic: sex

text: Blood

text: Human sample from Homo sapiens

characteristic: title


text: The First Affiliated Hospital, Sun Yat-sen University

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Human

text: 1 year-old

characteristic: isolate

text: Homo sapiens

text: male

text: Blood

text: Human sample from Homo sapiens


characteristic: External Id

characteristic: INSDC center name

text: live

text: Human

text: 3 year-old

text: Homo sapiens

text: female

text: Blood

text: Human sample from Homo sapiens


characteristic: INSDC first public

text: live

text: Human

text: 4 year-old

text: Homo sapiens

text: male

text: Blood

characteristic: tissue

text: Human sample from Homo sapiens


text: live

text: Human

characteristic: NCBI submission model

text: 6 year-old

text: Homo sapiens

text: female

text: Blood

text: Human sample from Homo sapiens


text: veterinary clinical/research, other animal

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC secondary accession

text: live

characteristic: ProjectAccession

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: Ohio ADDL

characteristic: collected by

characteristic: collection date

text: Salmonella

characteristic: genus

text: USA:OH

characteristic: geo loc name

text: Equus caballus, Feces

characteristic: isolation source

text: equus caballus:NCBITAXON_9796, feces:UBERON_0001988

characteristic: ontological term

text: Salmonella enterica

text: animal

characteristic: source type

text: enterica

characteristic: species

text: Pathogen: environmental/food/other sample from Salmonella enterica


characteristic: External Id

text: US Department of Agriculture, Agriculture Research Service

characteristic: INSDC center name

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS.eu

text: MIGS/MIMS/MIMARKS.plant-associated

characteristic: NCBI submission package

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: China: Shaanxi Province, Fuping County

text: Zanthoxylum bungeanum

characteristic: host

text: Fusarium continuum

characteristic: organism

text: haploid

characteristic: ploidy

text: asexual

characteristic: propagation

text: NRRL 66286

characteristic: strain

text: MIGS Eukaryotic sample from Fusarium continuum

characteristic: title

text: culture from holotype of Fusarium continuum

characteristic: type material


name: Uncultivated Planctomycetes bacterium SZUA-1002 genome recovered from SRR3577362

text: The University of Hong Kong

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: SRA accession

text: MEGAHIT v1.1.2

characteristic: collection date

text: This BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: SRR3577362

characteristic: derived-from

text: true

characteristic: environmental sample

characteristic: genome coverage

text: USA:Guaymas Basin

characteristic: geo loc name

characteristic: isolate

text: Guaymas Basin Hydrothermal plume metagenome

characteristic: isolation source

text: 27.51583333 N 111.425 W

characteristic: lat lon

text: Bowtie 2 v2.2.8

text: hydrothermal vent metagenome

characteristic: metagenome source

text: true

characteristic: metagenomic

text: Planctomycetota bacterium

text: CheckM v1.0.7

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Planctomycetota bacterium


name: Uncultivated Planctomycetes bacterium SZUA-1009 genome recovered from SRR3577362

characteristic: External Id

text: The University of Hong Kong

characteristic: INSDC center name

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: MEGAHIT v1.1.2

text: true

text: USA:Guaymas Basin

text: 27.51583333 N 111.425 W

text: Bowtie 2 v2.2.8

text: hydrothermal vent metagenome

text: true

text: Planctomycetota bacterium

characteristic: organism

text: CheckM v1.0.7

text: metagenomic assembly

characteristic: title


name: Uncultivated Planctomycetes bacterium SZUA-1014 genome recovered from SRR3577362

text: The University of Hong Kong

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: SRA accession

text: MEGAHIT v1.1.2

characteristic: collection date

characteristic: derived-from

text: true

text: USA:Guaymas Basin

text: 27.51583333 N 111.425 W

text: Bowtie 2 v2.2.8

text: hydrothermal vent metagenome

text: true

text: Planctomycetota bacterium

text: CheckM v1.0.7

text: metagenomic assembly


name: Uncultivated Planctomycetes bacterium SZUA-1044 genome recovered from SRR3577362

text: The University of Hong Kong

text: live

text: Microbe, viral or environmental

text: MEGAHIT v1.1.2

text: true

characteristic: environmental sample

characteristic: genome coverage

text: USA:Guaymas Basin

characteristic: geo loc name

characteristic: isolate

characteristic: isolation source

text: 27.51583333 N 111.425 W

characteristic: lat lon

text: Bowtie 2 v2.2.8

text: hydrothermal vent metagenome

text: true

text: Planctomycetota bacterium

text: CheckM v1.0.7

text: metagenomic assembly


name: Uncultivated Planctomycetes bacterium SZUA-1050 genome recovered from SRR3577362

characteristic: External Id

text: The University of Hong Kong

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: MEGAHIT v1.1.2

text: true

text: USA:Guaymas Basin

text: 27.51583333 N 111.425 W

text: Bowtie 2 v2.2.8

text: hydrothermal vent metagenome

characteristic: metagenome source

text: true

characteristic: metagenomic

text: Planctomycetota bacterium

text: CheckM v1.0.7

text: metagenomic assembly

characteristic: sample type


name: Uncultivated Planctomycetes bacterium SZUA-1084 genome recovered from SRR3577362

text: The University of Hong Kong

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: MEGAHIT v1.1.2

text: true

text: USA:Guaymas Basin

text: 27.51583333 N 111.425 W

text: Bowtie 2 v2.2.8

text: hydrothermal vent metagenome

text: true

text: Planctomycetota bacterium

characteristic: organism

text: CheckM v1.0.7

text: metagenomic assembly

characteristic: title


name: Uncultivated Planctomycetes bacterium SZUA-1191 genome recovered from SRR1217367 SRR1217459 SRR1217564 SRR1217566

text: The University of Hong Kong

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: SRA accession

text: MEGAHIT v1.1.2

characteristic: collection date

text: This BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: SRR1217367 SRR1217459 SRR1217564 SRR1217566

characteristic: derived-from

text: true

characteristic: environmental sample

characteristic: genome coverage

text: Pacific Ocean:Lau Basin

text: Kilo Moana Hydrothermal plume 60m

text: 20.05382503 S 176.13358938 W

text: Bowtie 2 v2.2.8

text: hydrothermal vent metagenome

text: true

text: Planctomycetota bacterium

text: CheckM v1.0.7

text: metagenomic assembly


name: Uncultivated Planctomycetes bacterium SZUA-1234 genome recovered from SRR1217367 SRR1217459 SRR1217564 SRR1217566

characteristic: External Id

text: The University of Hong Kong

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: MEGAHIT v1.1.2

text: true

text: Pacific Ocean:Lau Basin

characteristic: geo loc name

characteristic: isolate

text: Kilo Moana Hydrothermal plume 60m

characteristic: isolation source

text: 20.05382503 S 176.13358938 W

characteristic: lat lon

text: Bowtie 2 v2.2.8

text: hydrothermal vent metagenome

text: true

text: Planctomycetota bacterium

text: CheckM v1.0.7

text: metagenomic assembly


name: Uncultivated Planctomycetes bacterium SZUA-1240 genome recovered from SRR1217367 SRR1217459 SRR1217564 SRR1217566

text: The University of Hong Kong

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

text: MEGAHIT v1.1.2

text: true

text: Pacific Ocean:Lau Basin

text: Kilo Moana Hydrothermal plume 60m

text: 20.05382503 S 176.13358938 W

text: Bowtie 2 v2.2.8

text: hydrothermal vent metagenome

characteristic: metagenome source

text: true

characteristic: metagenomic

text: Planctomycetota bacterium

text: CheckM v1.0.7

text: metagenomic assembly

characteristic: sample type


name: Uncultivated Planctomycetes bacterium SZUA-1322 genome recovered from SRR1217460 SRR1217463 SRR1217565

text: The University of Hong Kong

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: MEGAHIT v1.1.2

text: This BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: SRR1217460 SRR1217463 SRR1217565

text: true

text: Pacific Ocean:Lau Basin

text: Abe hydrothermal plume 200m

text: 20.76121471 S 176.19057363 W

text: Bowtie 2 v2.2.8

text: hydrothermal vent metagenome

text: true

text: Planctomycetota bacterium

characteristic: organism

text: CheckM v1.0.7

text: metagenomic assembly

characteristic: title


name: Uncultivated Planctomycetes bacterium SZUA-1497 genome recovered from ERS1370023

characteristic: External Id

text: The University of Hong Kong

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: MEGAHIT v1.1.2

characteristic: collection date

text: This BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: ERS1370023

characteristic: derived-from

text: true

characteristic: environmental sample

characteristic: genome coverage

text: Atlantic Ocean:Mid Cayman Rise

text: Mid-Cayman Rise Vent Fluids

text: 18.3747 N 81.7973 W

text: Bowtie 2 v2.2.8

text: hydrothermal vent metagenome

text: true

text: Planctomycetota bacterium

text: CheckM v1.0.7

text: metagenomic assembly


text: Positive control_91

characteristic: Group

text: Washington University School of Medicine

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: Homo sapiens

characteristic: host

text: metagenome

text: FFPE


text: Positive control_92

text: live

text: Metagenome or environmental

text: Homo sapiens

text: metagenome

text: FFPE


text: Positive control_93

text: live

text: Metagenome or environmental

text: Homo sapiens

text: metagenome

text: FFPE


text: Positive control_94

text: live

text: Metagenome or environmental

text: Homo sapiens

text: metagenome

text: FFPE


text: Negative control_99

text: live

text: Metagenome or environmental

text: Homo sapiens

text: metagenome

text: FFPE


text: Negative control_100

text: live

text: Metagenome or environmental

text: Homo sapiens

text: metagenome

text: FFPE


text: Negative control_101

text: live

text: Metagenome or environmental

text: Homo sapiens

text: metagenome

text: FFPE


text: Negative control_102

text: live

text: Metagenome or environmental

text: Homo sapiens

text: metagenome

text: FFPE


text: Negative control_103

text: live

text: Metagenome or environmental

text: Homo sapiens

text: metagenome

text: FFPE


text: Negative control_104

text: live

text: Metagenome or environmental

text: Homo sapiens

text: metagenome

text: FFPE


text: Negative control_105

text: live

text: Metagenome or environmental

text: Homo sapiens

text: metagenome

text: FFPE


text: Negative control_106

text: live

text: Metagenome or environmental

text: Homo sapiens

text: metagenome

text: FFPE


text: live

text: Metagenome or environmental

text: Homo sapiens

text: metagenome

text: FFPE


text: T cell_61

text: live

text: Metagenome or environmental

text: Homo sapiens

text: metagenome

text: FFPE


text: T cell_62

text: live

text: Metagenome or environmental

text: Homo sapiens

text: metagenome

text: FFPE


text: T cell_63

text: live

text: Metagenome or environmental

text: Homo sapiens

text: metagenome

text: FFPE


text: DLBCL

text: live

text: Metagenome or environmental

text: Homo sapiens

text: metagenome

text: FFPE


text: T cell_64

text: live

text: Metagenome or environmental

text: Homo sapiens

text: metagenome

text: FFPE


text: T cell_65

text: live

text: Metagenome or environmental

text: Homo sapiens

text: metagenome

text: FFPE


text: T cell_66

text: live

text: Metagenome or environmental

text: Homo sapiens

text: metagenome

text: FFPE


text: University of Illinois at Urbana Champaign

characteristic: INSDC secondary accession

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Actinacidiphila yeochonensis

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Actinacidiphila yeochonensis


text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Keywords: GSC:MIxS;MIGS:6.0

text: Actinacidiphila glaucinigra

text: MIGS Cultured Bacterial/Archaeal sample from Actinacidiphila glaucinigra


text: live

text: MIGS.ba

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIGS:6.0

text: Actinacidiphila alni

characteristic: organism

text: MIGS Cultured Bacterial/Archaeal sample from Actinacidiphila alni

characteristic: title


characteristic: External Id

characteristic: INSDC center name

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Actinacidiphila guanduensis

text: MIGS Cultured Bacterial/Archaeal sample from Actinacidiphila guanduensis


text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Actinacidiphila rubida

text: MIGS Cultured Bacterial/Archaeal sample from Actinacidiphila rubida


text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Actinacidiphila yanglinensis

text: MIGS Cultured Bacterial/Archaeal sample from Actinacidiphila yanglinensis


text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Kitasatospora aureofaciens

text: MIGS Cultured Bacterial/Archaeal sample from Kitasatospora aureofaciens


text: University of Oslo

text: live

text: Microbe, viral or environmental

characteristic: condition

text: laboratory strain

characteristic: isolate

text: Streptococcus mitis

text: monoculture

characteristic: sample type

text: Microbe sample from Streptococcus mitis

text: neotype strain of Streptococcus mitis

characteristic: type material


Dengue 4 PNG 2016a

text: Queensland Health Forensic and Scientific Services

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.cl

text: Alyssa Pyke

characteristic: collected by

characteristic: collection date

text: acute phase serum

text: II

characteristic: genotype

text: Papua New Guinea

characteristic: geo loc name

text: Homo sapiens

text: dengue

characteristic: host disease

text: male

characteristic: host sex

text: human - traveller from PNG to Australia

text: dengue infection

text: acute infection

text: PNG 2016a

text: C6/36 Aedes albopictus cells, passage 1

characteristic: isolation source

text: Dengue virus type 4

characteristic: serotype

text: D4 PNG 2016a

text: Pathogen: clinical or host-associated sample from Dengue virus type 4


Candidatus Sulcia muelleri

text: San Joaquin Valley Agricultural Sciences Center, USDA

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Taiwan

text: Kolla paulula

characteristic: host

text: Candidatus Karelsulcia muelleri

characteristic: organism

text: metagenomic assembly

characteristic: strain

text: Microbe sample from Candidatus Karelsulcia muelleri

characteristic: title


halovirus phiH1 DNA

characteristic: External Id

text: Max-Planck-Institute of Biochemistry

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Viral

characteristic: SRA accession

text: halovirus phiH1

characteristic: correct organism name

text: Germany

text: Halobacterium salinarum R1

text: variant phiH1

characteristic: isolate

text: spontaneously lysed culture of infected host

text: Myohalovirus phiH

characteristic: taxid

text: Viral sample from halovirus phiH1


Androctonus amoreuxi transcriptome

text: University of Wisconsin Madison

characteristic: INSDC last update

text: live

text: Invertebrate

text: Israel: Haluza Sand dunes

text: Captive bred adult

text: Androctonus amoreuxi

text: Brain, telson

characteristic: tissue

text: Invertebrate sample from Androctonus amoreuxi


text: environmental-factory/production facility

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: SHL

characteristic: collected by

characteristic: collection date

text: Listeria

characteristic: genus

text: USA:IA

characteristic: geo loc name

text: environmental swab sponge floor

characteristic: isolation source

text: environmental (swab or sampling):GENEPIO_0001732| environmental floor:CURATION_0000360| environmental sponge:CURATION_0000359

characteristic: ontological term

text: Listeria monocytogenes

text: environmental

characteristic: source type

text: monocytogenes

characteristic: species

text: Pathogen: environmental/food/other sample from Listeria monocytogenes


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: SHL

text: Listeria

text: USA:IA

text: environmental swab sponge refrigerated storage

text: environmental (swab or sampling):GENEPIO_0001732| environmental sponge:CURATION_0000359

text: Listeria monocytogenes

characteristic: organism

text: environmental

text: monocytogenes

characteristic: strain

characteristic: title


characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: SHL

characteristic: collected by

characteristic: collection date

text: Listeria

text: USA:IA

text: environmental swab sponge compactor hall

text: compactor hall:CURATION_0000390| environmental (swab or sampling):GENEPIO_0001732| environmental sponge:CURATION_0000359

text: Listeria monocytogenes

text: environmental

text: monocytogenes


characteristic: External Id

text: live

text: Pathogen.env

text: environmental/food/other

text: SHL

text: Listeria

characteristic: genus

text: USA:IA

characteristic: geo loc name

text: environmental swab sponge door

characteristic: isolation source

text: door:CURATION_0000370| environmental (swab or sampling):GENEPIO_0001732| environmental sponge:CURATION_0000359

characteristic: ontological term

text: Listeria monocytogenes

text: environmental

characteristic: source type

text: monocytogenes

characteristic: species


text: environmental

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: SHL

text: Listeria

text: USA:IA

text: sponge

text: Listeria monocytogenes

characteristic: organism

text: environmental

text: monocytogenes


characteristic: IFSAC+ Category

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: SHL

text: Listeria

text: USA:IA

text: environmental swab sponge composite floor and drain

text: environmental (swab or sampling):GENEPIO_0001732| environmental floor:CURATION_0000360| environmental sponge:CURATION_0000359| floor drain:CURATION_0000332

text: Listeria monocytogenes

text: environmental

text: monocytogenes

characteristic: strain

characteristic: title


characteristic: External Id

text: live

text: Pathogen.env

text: environmental/food/other

text: SHL

characteristic: collected by

characteristic: collection date

text: Listeria

characteristic: genus

text: USA:IA

characteristic: geo loc name

text: environmental swab sponge drain

characteristic: isolation source

text: environmental (swab or sampling):GENEPIO_0001732| environmental sponge:CURATION_0000359| plumbing drain:ENVO_01000924

characteristic: ontological term

text: Listeria monocytogenes

text: environmental

text: monocytogenes


text: tropical fruit

characteristic: IFSAC Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: NMSU

text: Salmonella

text: Viet Nam

text: CFSAN085506;FF 24 a

text: frozen pineapple

text: frozen:PATO_0001985, pineapple (whole, raw):FOODON_03301831

text: Salmonella enterica

text: food

characteristic: source type

text: enterica

characteristic: species

text: Pathogen: environmental/food/other sample from Salmonella enterica


text: Chongqing University of Arts and Sciences

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: SRA accession

text: China:Chongqing

characteristic: isolate

text: Debaryomyces hansenii

characteristic: organism

text: cell culture

characteristic: sample type


characteristic: External Id

text: Integrative Biology/Comparative Biology, PICB

text: live

text: Generic

characteristic: cell line

text: highly transfectable derivative of human embryonic kidney 293 cells

characteristic: cell type

characteristic: genotype/variation

text: Homo sapiens

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: empty plasmid

text: Homo sapiens


Sphingomonas sp. HMF7854

text: Hankuk University of Foreign Studies

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: South Korea:Yongin

characteristic: geo loc name

text: tree

characteristic: isolation source

text: Sphingomonas ginkgonis

text: environmental sample

characteristic: strain

text: Microbe sample from Sphingomonas ginkgonis

text: type material of Sphingomonas ginkgonis

characteristic: type material


text: Mayo Clinic

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: SRA accession

text: Chronic kidney disease (CKD)

characteristic: diagnosis

text: Homo sapiens

text: kidney tubular progenitor organoid

text: 3D differentiated renal progenitor organoid

characteristic: tissue


characteristic: External Id

text: Mayo Clinic

text: live

text: Generic

text: Chronic kidney disease (CKD)

text: Homo sapiens

characteristic: organism

text: kidney tubular progenitor cell

text: renal progenitor


text: Mayo Clinic

characteristic: INSDC center name

text: live

text: Generic

text: Chronic kidney disease (CKD)

text: Homo sapiens

text: kidney tissue

text: adult kidney tissue

characteristic: title


text: veterinary clinical/research| other animal

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC first public

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: OADDL - OK

characteristic: collected by

text: Salmonella

characteristic: genus

text: USA:OK

text: equine stall gauze

text: Salmonella enterica

text: animal

characteristic: source type

text: enterica

characteristic: species


text: veterinary clinical/research| cow

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: OADDL - OK

characteristic: collection date

text: Salmonella

text: USA:OK

characteristic: geo loc name

text: bovine intestine

characteristic: isolation source

text: bovine:FOODON_03414374, intestine:UBERON_0000160

characteristic: ontological term

text: Salmonella enterica

text: animal

text: enterica

characteristic: strain


characteristic: External Id

text: pork

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: MN

text: Salmonella

text: USA:IA

text: porcine liver

text: swine:FOODON_03411136|liver:UBERON_0002107

text: Salmonella enterica

characteristic: organism

text: food

text: enterica

characteristic: title


text: pork

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: PublicAccession

text: environmental/food/other

text: MN

characteristic: collected by

text: Salmonella

characteristic: genus

text: USA:OK

text: porcine liver

text: Salmonella enterica

text: food

characteristic: source type

text: enterica

characteristic: species


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission package

characteristic: ProjectAccession

text: environmental/food/other

text: OADDL - OK

characteristic: collection date

text: Salmonella

text: USA:OK

characteristic: geo loc name

text: equine joint swab

text: Salmonella enterica

text: animal

text: enterica


characteristic: External Id

text: veterinary clinical/research| pig

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: MN

text: Salmonella

text: USA:MN

text: porcine lung (porcine)

characteristic: isolation source

text: lung:UBERON_0002048, swine:FOODON_03411136

characteristic: ontological term

text: Salmonella enterica

text: animal

text: enterica

characteristic: strain


text: veterinary clinical/research| cow

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: MN

characteristic: collected by

text: Salmonella

characteristic: genus

text: USA:MN

text: kidney (Bos taurus)

text: bovine:FOODON_03414374, kidney:UBERON_0002113

text: Salmonella enterica

characteristic: organism

text: animal

text: enterica

characteristic: title


text: veterinary clinical/research| cow

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission package

characteristic: ProjectAccession

text: environmental/food/other

text: OADDL - OK

text: Salmonella

text: USA:OK

text: feces bovine

text: bovine:FOODON_03414374, feces:UBERON_0001988

text: Salmonella enterica

text: animal

characteristic: source type

text: enterica

characteristic: species


characteristic: External Id

text: veterinary clinical/research| cow

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: Michigan State University VDL

characteristic: collection date

text: Salmonella

text: USA:MI

characteristic: geo loc name

text: feces (Bos taurus)

characteristic: isolation source

text: bos taurus:NCBITAXON_9913, feces:UBERON_0001988

text: Salmonella enterica

text: animal

text: enterica


text: veterinary clinical/research| companion animal

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: Michigan State University VDL

characteristic: collected by

text: Salmonella

characteristic: genus

text: USA:MI

text: urine (Felis silvestris catus)

text: felis catus:NCBITAXON_9685, urine:UBERON_0001088

characteristic: ontological term

text: Salmonella enterica

text: animal

text: enterica

characteristic: strain


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission package

characteristic: ProjectAccession

text: environmental/food/other

text: Michigan State University VDL

text: Salmonella

text: USA:MI

text: feces (Equus ferus caballus)

text: equus caballus:NCBITAXON_9796, feces:UBERON_0001988

text: Salmonella enterica

characteristic: organism

text: animal

text: enterica

characteristic: title


characteristic: External Id

text: veterinary clinical/research| cow

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: Michigan State University VDL

characteristic: collection date

text: Salmonella

text: USA:MI

text: intestine (Bos taurus)

text: bos taurus:NCBITAXON_9913, intestine:UBERON_0000160

text: Salmonella enterica

text: animal

characteristic: source type

text: enterica

characteristic: species

text: Pathogen: environmental/food/other sample from Salmonella enterica


text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: North Carolina

characteristic: collected by

text: Escherichia

characteristic: genus

text: USA:NC

characteristic: geo loc name

text: equine incision site

characteristic: isolation source

text: equine:CURATION_0001431| incision site:CURATION_0000472

text: Escherichia coli

text: animal

text: coli

text: Pathogen: environmental/food/other sample from Escherichia coli


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission package

characteristic: ProjectAccession

text: environmental/food/other

text: North Carolina

text: Salmonella

text: USA:NC

text: feces equine

text: Salmonella enterica

text: animal

text: enterica

characteristic: strain


characteristic: External Id

text: veterinary clinical/research| pig

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: MN

text: Salmonella

text: USA:MN

text: porcine intestine

text: intestine:UBERON_0000160, swine:FOODON_03411136

characteristic: ontological term

text: Salmonella enterica

characteristic: organism

text: animal

text: enterica

characteristic: title


text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: North Carolina

characteristic: collected by

characteristic: collection date

text: Escherichia

text: USA:NC

text: urine (Feline)

text: urine:UBERON_0001088, cat:NCIT_C14191

text: Escherichia coli

text: animal

characteristic: source type

text: coli

characteristic: species


text: veterinary clinical/research| wild animal

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: North Carolina

text: Salmonella

characteristic: genus

text: USA:NC

characteristic: geo loc name

text: feces snake

characteristic: isolation source

text: feces:UBERON_0001988, snake:FOODON_03411295

text: Salmonella enterica

text: animal

text: enterica


F. oxysporum

characteristic: External Id

text: Kunming University of Science and Technology

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIGS.eu

text: MIGS/MIMS/MIMARKS.plant-associated

text: free living

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: From Panax notoginseng root rot plant

text: Panax notoginseng root rot

text: plant

text: China: Kunming

text: disease

text: Panax notoginseng

characteristic: host

text: 28 degree

characteristic: isolate

text: 25.02 N 102.42 E

text: Fusarium oxysporum

text: Panax notoginseng

characteristic: pathogenicity

text: diploid

characteristic: ploidy

text: sexual

characteristic: propagation

text: F. oxysporum

characteristic: strain

text: Genome of Fusarium oxysporum causing Panax notoginseng root rot

text: heterotroph


text: Wuhan University

characteristic: INSDC last update

text: live

text: Plant

characteristic: NCBI submission model

text: 10 DAP-1

characteristic: age

text: Chiifu

characteristic: cultivar

text: Reproductive growth

characteristic: dev stage

text: Wuhan university

characteristic: ecotype

text: China:Wuhan

text: Ministry of Agriculture, Oil Crops Research Institute of CAAS

text: Brassica rapa

characteristic: organism

text: leaf

characteristic: tissue

text: Plant sample from Brassica rapa

characteristic: title


characteristic: External Id

text: Wuhan University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Plant

characteristic: NCBI submission package

text: 10 DAP-2

text: Chiifu

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

characteristic: geo loc name

text: Brassica rapa

text: leaf

text: Plant sample from Brassica rapa


text: Wuhan University

text: live

text: Plant

text: 10 DAP-3

text: Chiifu

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

characteristic: isolate

text: Brassica rapa

text: leaf

text: Plant sample from Brassica rapa


text: Wuhan University

text: live

text: Plant

text: 10 DAP-1

text: Chiifu

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

text: Brassica rapa

text: stem

text: Plant sample from Brassica rapa


text: Wuhan University

text: live

text: Plant

text: 10 DAP-2

text: Chiifu

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

text: Brassica rapa

text: stem

text: Plant sample from Brassica rapa


text: Wuhan University

text: live

text: Plant

text: 10 DAP-3

text: Chiifu

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

text: Brassica rapa

text: stem

text: Plant sample from Brassica rapa


text: Wuhan University

text: live

text: Plant

text: 10 DAP-1

text: Chiifu

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

text: Brassica rapa

text: flower

text: Plant sample from Brassica rapa


text: Wuhan University

text: live

text: Plant

text: 10 DAP-2

text: Chiifu

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

text: Brassica rapa

text: flower

text: Plant sample from Brassica rapa


text: Wuhan University

text: live

text: Plant

text: 10 DAP-3

text: Chiifu

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

text: Brassica rapa

text: flower

text: Plant sample from Brassica rapa


text: Wuhan University

text: live

text: Plant

text: 10 DAP-1

text: Chiifu

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

text: Brassica rapa

text: silique

text: Plant sample from Brassica rapa


text: Wuhan University

text: live

text: Plant

text: 10 DAP-2

text: Chiifu

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

text: Brassica rapa

text: silique

text: Plant sample from Brassica rapa


text: Wuhan University

text: live

text: Plant

text: 10 DAP-3

text: Chiifu

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

text: Brassica rapa

text: silique

text: Plant sample from Brassica rapa


text: Wuhan University

text: live

text: Plant

text: 10 DAP-1

text: Jinzaosheng

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

text: Brassica oleracea

text: leaf

text: Plant sample from Brassica oleracea


text: Wuhan University

text: live

text: Plant

text: 10 DAP-2

text: Jinzaosheng

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

text: Brassica oleracea

text: leaf

text: Plant sample from Brassica oleracea


text: Wuhan University

text: live

text: Plant

text: 10 DAP-3

text: Jinzaosheng

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

text: Brassica oleracea

text: leaf

text: Plant sample from Brassica oleracea


text: Wuhan University

text: live

text: Plant

text: 10 DAP-1

text: Jinzaosheng

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

text: Brassica oleracea

text: stem

text: Plant sample from Brassica oleracea


text: Wuhan University

text: live

text: Plant

text: 10 DAP-2

text: Jinzaosheng

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

text: Brassica oleracea

text: stem

text: Plant sample from Brassica oleracea


text: Wuhan University

text: live

text: Plant

text: 10 DAP-3

text: Jinzaosheng

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

text: Brassica oleracea

text: stem

text: Plant sample from Brassica oleracea


text: Wuhan University

text: live

text: Plant

text: 10 DAP-1

text: Jinzaosheng

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

text: Brassica oleracea

text: flower

text: Plant sample from Brassica oleracea


text: Wuhan University

text: live

text: Plant

text: 10 DAP-2

text: Jinzaosheng

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

text: Brassica oleracea

text: flower

text: Plant sample from Brassica oleracea


text: Wuhan University

text: live

text: Plant

text: 10 DAP-3

text: Jinzaosheng

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

text: Brassica oleracea

text: flower

text: Plant sample from Brassica oleracea


text: Wuhan University

text: live

text: Plant

text: 10 DAP-1

text: Jinzaosheng

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

text: Brassica oleracea

text: silique

text: Plant sample from Brassica oleracea


text: Wuhan University

text: live

text: Plant

text: 10 DAP-2

text: Jinzaosheng

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

text: Brassica oleracea

text: silique

text: Plant sample from Brassica oleracea


text: Wuhan University

text: live

text: Plant

text: 10 DAP-3

text: Jinzaosheng

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

text: Brassica oleracea

text: silique

text: Plant sample from Brassica oleracea


text: Wuhan University

text: live

text: Plant

text: 10 DAP-1

text: Darmor

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

text: Brassica napus

text: leaf

text: Plant sample from Brassica napus


text: Wuhan University

text: live

text: Plant

text: 10 DAP-2

text: Darmor

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

text: Brassica napus

text: leaf

text: Plant sample from Brassica napus


text: Wuhan University

text: live

text: Plant

text: 10 DAP-3

text: Darmor

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

text: Brassica napus

text: leaf

text: Plant sample from Brassica napus


text: Wuhan University

text: live

text: Plant

text: 10 DAP-1

text: Darmor

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

text: Brassica napus

text: stem

text: Plant sample from Brassica napus


text: Wuhan University

text: live

text: Plant

text: 10 DAP-2

text: Darmor

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

text: Brassica napus

text: stem

text: Plant sample from Brassica napus


text: Wuhan University

text: live

text: Plant

text: 10 DAP-3

text: Darmor

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

text: Brassica napus

text: stem

text: Plant sample from Brassica napus


text: Wuhan University

text: live

text: Plant

text: 10 DAP-1

text: Darmor

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

text: Brassica napus

text: flower

text: Plant sample from Brassica napus


text: Wuhan University

text: live

text: Plant

text: 10 DAP-2

text: Darmor

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

text: Brassica napus

text: flower

text: Plant sample from Brassica napus


text: Wuhan University

text: live

text: Plant

text: 10 DAP-3

text: Darmor

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

text: Brassica napus

text: flower

text: Plant sample from Brassica napus


text: Wuhan University

text: live

text: Plant

text: 10 DAP-1

text: Darmor

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

text: Brassica napus

text: silique

text: Plant sample from Brassica napus


text: Wuhan University

text: live

text: Plant

text: 10 DAP-2

text: Darmor

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

text: Brassica napus

text: silique

text: Plant sample from Brassica napus


text: Wuhan University

text: live

text: Plant

text: 10 DAP-3

text: Darmor

text: Reproductive growth

text: Wuhan university

text: China:Wuhan

text: Brassica napus

text: silique

text: Plant sample from Brassica napus


tag: Namespace:DOE Joint Genome Institute

text: Host-associated | Fungi | Mycelium | Unclassified | Unclassified

characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

characteristic: SRA accession

characteristic: collection date

text: Australia: Sydney

text: Root/Fungal contact zone

characteristic: isolation source

text: 33.8688 S 151.209 E

characteristic: lat lon

text: fungus metagenome

text: Metatranscriptome of Eucalyptus grandis roots and Pisolithus albus SI12 contact zone from Australia - SH_48hr_1


text: DOE Joint Genome Institute

characteristic: INSDC last update

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

text: Australia: Sydney

text: Root/Fungal contact zone

text: 33.8688 S 151.209 E

text: fungus metagenome

text: Metatranscriptome of Eucalyptus grandis roots and Pisolithus albus SI12 contact zone from Australia - SS_48hr_1


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Australia: Sydney

text: Root/Fungal contact zone

text: 33.8688 S 151.209 E

text: fungus metagenome

characteristic: organism

text: Metatranscriptome of Eucalyptus grandis roots and Pisolithus albus SI12 contact zone from Australia - SS_48hr_2


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Australia: Sydney

text: Control fungi-root association

text: 33.8688 S 151.209 E

text: fungus metagenome

text: Metatranscriptome of Pisolithus albus SI12 and Eucalyptus grandis ectomycorrhiza from Australia - SI12_ECM_lowgluc_1

characteristic: title


characteristic: External Id

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Australia: Sydney

text: Control fungi-root association

text: 33.8688 S 151.209 E

text: fungus metagenome

text: Metatranscriptome of Pisolithus albus SI12 and Eucalyptus grandis ectomycorrhiza from Australia - SI12_ECM_lowgluc_3


text: DOE Joint Genome Institute

characteristic: INSDC center name

text: live

text: Metagenome or environmental

text: Australia: Sydney

text: Control fungi-root association

text: 33.8688 S 151.209 E

text: fungus metagenome

text: Metatranscriptome of Pisolithus albus SI12 and Eucalyptus grandis ectomycorrhiza from Australia - SI12_ECM_lowgluc_2


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Australia: Sydney

text: Root/Fungal contact zone

text: 33.8688 S 151.209 E

text: fungus metagenome

text: Metatranscriptome of Eucalyptus grandis roots and Pisolithus albus SI12 contact zone from Australia - SH_48hr_2


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Australia: Sydney

text: Root/Fungal contact zone

text: 33.8688 S 151.209 E

text: fungus metagenome

text: Metatranscriptome of Eucalyptus grandis roots and Pisolithus albus SI12 contact zone from Australia - SS_48hr_3


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Australia: Sydney

text: Root/Fungal contact zone

text: 33.8688 S 151.209 E

text: fungus metagenome

text: Metatranscriptome of Eucalyptus grandis roots and Pisolithus albus SI12 contact zone from Australia - SH_48hr_3


text: University of Salamanca Q3718001E

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: ants

text: field

text: soil

text: Spain

text: Lasius niger

characteristic: host

text: TSA TSA

text: 40.9200 N 5.5555 W

text: Brevibacterium permense

text: no

text: ants

characteristic: strain

text: Microbe sample from Brevibacterium permense


name: Draft genome sequence of Pseudomonas balearica Z8 = CCUG 70972

text: University of Gothenburg - CCUG

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: culture collection

text: Iran

characteristic: geo loc name

text: Petrochemical wastewater

text: Stutzerimonas balearica

text: Bacterial strain

characteristic: sample type

text: Microbe sample from Stutzerimonas balearica


text: Fudan University

text: live

text: Microbe, viral or environmental

text: China:GuiZhou Kaili

text: Gastrodia elata

text: not collected

characteristic: isolate

text: Erwinia billingiae

text: single cell

text: Microbe sample from Erwinia billingiae


text: dairy, other (confectionery)

characteristic: IFSAC Category

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: PublicAccession

characteristic: SRA accession

text: MDARD

characteristic: collected by

characteristic: collection date

text: Listeria

characteristic: genus

text: USA:MI

text: ice cream

characteristic: isolation source

text: ice cream food product:FOODON_00001045

characteristic: ontological term

text: Listeria monocytogenes

text: food

characteristic: source type

text: monocytogenes

characteristic: species

text: Pathogen: environmental/food/other sample from Listeria monocytogenes


characteristic: External Id

text: clinical/research| human

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: ProjectAccession

text: clinical/host-associated

text: Clinical Micorbiology Laboratory @ Brigham and Women's Hospital

characteristic: description

text: Escherichia

text: USA:MA

text: Homo sapiens

characteristic: host

text: diarrhea

characteristic: host disease

text: stool

text: Escherichia coli O157:H7

characteristic: organism

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: human

text: coli

characteristic: strain

text: Pathogen: clinical or host-associated sample from Escherichia coli O157:H7

characteristic: title


text: clinical/research, human

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: NCBI submission package

characteristic: PublicAccession

characteristic: SRA accession

text: clinical/host-associated

characteristic: collected by

characteristic: collection date

text: Shigella

characteristic: genus

text: USA:MA

characteristic: geo loc name

text: Homo sapiens

text: diarrhea

text: stool

characteristic: isolation source

characteristic: ontological term

text: Shigella sp. CFSAN082790

text: GenomeTrakr

text: human

characteristic: source type

text: sp.

characteristic: species

text: Pathogen: clinical or host-associated sample from Shigella sp. CFSAN082790


characteristic: External Id

text: National Chung Cheng University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

text: Ching-Lin Shy

text: Taiwan

text: Homo sapiens

characteristic: host

text: infection

text: blood

text: 24.10 N 120.40 E

text: Shewanella algae

characteristic: organism

text: Pathogen: clinical or host-associated sample from Shewanella algae


swine

text: Nanjing Agricultural University

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: China: Nanjing

text: swine

text: 32.37 N 119.14 E

text: pig gut metagenome

text: Gut microbiota from pigs

characteristic: title


text: Shandong University

text: live

text: Beta-lactamase

text: CTX-M

text: no

characteristic: carbapenemase

text: Environmental sample of bacteria carrying beta-lactamase

characteristic: description

text: no

text: Escherichia coli

characteristic: strain

text: Beta-lactamase sample from Escherichia sp.


text: Shandong University

text: live

text: Beta-lactamase

text: CTX-M

text: no

text: no

text: Escherichia coli


text: Shandong University

text: live

text: Beta-lactamase

text: CTX-M

text: no

text: no

text: Escherichia coli O157:H7 str. EC10


text: Shandong University

text: live

text: Beta-lactamase

text: CTX-M

text: no

text: no

text: Escherichia albertii


text: CeNAT

text: live

text: Microbe, viral or environmental

text: E. Escudero-Leyva, P. Chaverri, H. Castillo

characteristic: collected by

characteristic: collection date

text: Endophyte fungi associated to Rubiaceae

text: Costa Rica: Guanacaste province, Cerro del Hacha

characteristic: geo loc name

text: Rubiaceae

characteristic: isolate

text: Leaf endophyte

characteristic: isolation source

text: 11.0385 N 85.6008 W

characteristic: lat lon

text: Biscogniauxia atropunctata

text: Fungal endophyte

characteristic: sample type

text: Microbe sample from Biscogniauxia atropunctata


characteristic: External Id

text: University of Florida

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: no

characteristic: infection

text: Xenopus laevis

text: embryo

text: no brain

characteristic: tissue

text: brainless no infection, rep 1


text: University of Florida

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: yes

text: Xenopus laevis

characteristic: organism

text: embryo

text: no brain

text: brainless with infection, rep 2

characteristic: title


text: University of Florida

text: live

text: Generic

text: yes

text: Xenopus laevis

text: embryo

text: no brain

text: brainless with infection, rep 1


text: University of Florida

text: live

text: Generic

text: yes

text: Xenopus laevis

text: embryo

text: intact brain

text: Intact brain with infection, rep 2


text: University of Florida

text: live

text: Generic

text: yes

text: Xenopus laevis

text: embryo

text: intact brain

text: Intact brain with infection, rep 1


text: University of Florida

text: live

text: Generic

text: no

text: Xenopus laevis

text: embryo

text: no brain

text: brainless no infection, rep 2


text: University of Florida

text: live

text: Generic

text: no

text: Xenopus laevis

text: embryo

text: intact brain

text: Intact brain no infection, rep 2


text: University of Florida

text: live

text: Generic

text: no

text: Xenopus laevis

text: embryo

text: intact brain

text: Intact brain no infection, rep 1


text: University of Oregon

text: live

text: Model organism or animal

characteristic: collection-date

text: adult

text: Antarctica

characteristic: isolate

text: north west of Brabant Island

characteristic: isolation-source

text: 64.805139 S 63.150944 W

text: Chionodraco rastrospinosus

text: not determined

characteristic: sex

text: fin clip

text: Model organism or animal sample from Chionodraco rastrospinosus


characteristic: External Id

text: University of Oregon

text: live

text: Model organism or animal

text: adult

text: Antarctica

text: south west of Low Island

text: 64.049333 S 62.751306 W

text: Champsocephalus gunnari

text: not determined

text: fin clip

text: Model organism or animal sample from Champsocephalus gunnari


text: University of Oregon

characteristic: INSDC center name

text: live

text: Model organism or animal

text: adult

text: Antarctica

text: south west of Low Island

text: 63.462000 S 62.519222 W

text: Gobionotothen gibberifrons

text: not determined

text: fin clip

text: Model organism or animal sample from Gobionotothen gibberifrons


text: University of Oregon

characteristic: INSDC first public

text: live

text: Model organism or animal

text: adult

text: Falkland Islands (Islas Malvinas)

text: inter-tidal area in Stanley

text: 51.686556 S 57.919194 W

text: Eleginops maclovinus

text: not determined

text: red blood cells

text: Model organism or animal sample from Eleginops maclovinus


text: University of Oregon

characteristic: INSDC last update

text: live

text: Model organism or animal

text: adult

text: inter-tidal area at Tristan de Cunha

text: 37.080139 S 12.326333 W

text: Bovichtus diacanthus

text: not determined

text: red blood cells

text: Model organism or animal sample from Bovichtus diacanthus


text: College of Life Science

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: Antarctica

characteristic: geo loc name

text: soil

characteristic: isolation source

text: Sphingomonas paeninsulae

text: whole organism

characteristic: sample type

characteristic: strain

text: Microbe sample from Sphingomonas paeninsulae

text: type material of Sphingomonas paeninsulae

characteristic: type material


text: The Field Museum of Natural History

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Invertebrate

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: wild

characteristic: breed

text: USA: Payson, Arizona

text: Fraxinus velutina

characteristic: host

text: Mix conifer and oak forest. Mogollon rim

text: Dynastes grantii

text: thoracic muscle

characteristic: tissue

text: Invertebrate sample from Dynastes grantii


characteristic: External Id

text: The Field Museum of Natural History

characteristic: INSDC center name

text: live

text: Invertebrate

text: wild

text: USA: Reserve, NM

text: Fraxinus velutina

characteristic: isolate

text: Dynastes grantii

characteristic: organism

text: thoracic muscle

characteristic: title


text: environmental

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: FDA

characteristic: collected by

characteristic: collection date

characteristic: fda lab id

text: Listeria

characteristic: genus

text: USA:NY

characteristic: geo loc name

text: environmental swab

characteristic: isolation source

text: environmental (swab or sampling):GENEPIO_0001732

characteristic: ontological term

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: project name

text: United States Food and Drug Administration|Office of Regulatory Affairs|Northeast Food and Feed Laboratory

characteristic: sequenced by

text: environmental

characteristic: source type

text: monocytogenes

characteristic: species

text: Pathogen: environmental/food/other sample from Listeria monocytogenes


characteristic: External Id

text: environmental

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: FDA

text: Listeria

text: USA:NY

text: environmental swab

text: environmental (swab or sampling):genepio_0001732

text: Listeria monocytogenes

characteristic: organism

text: GenomeTrakr

text: environmental

text: monocytogenes

characteristic: strain

characteristic: title


text: Hubei University of Arts and Science

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: China: Niushou town, Xiangyang city, Hubei province

text: fermented kohlrabi 1

text: 32.12 N 112.02 E

text: food metagenome

text: Metagenome or environmental sample from food metagenome


text: Hubei University of Arts and Science

text: live

text: Metagenome or environmental

text: fermented kohlrabi 2

text: 32.12 N 112.02 E

text: food metagenome


text: Hubei University of Arts and Science

text: live

text: Metagenome or environmental

text: fermented kohlrabi 3

text: 32.12 N 112.02 E

text: food metagenome


text: Hubei University of Arts and Science

text: live

text: Metagenome or environmental

text: fermented kohlrabi 4

text: 32.12 N 112.02 E

text: food metagenome


text: Hubei University of Arts and Science

text: live

text: Metagenome or environmental

text: fermented kohlrabi 5

text: 32.12 N 112.02 E

text: food metagenome


text: Hubei University of Arts and Science

text: live

text: Metagenome or environmental

text: fermented kohlrabi 6

text: 32.12 N 112.02 E

text: food metagenome


text: Hubei University of Arts and Science

text: live

text: Metagenome or environmental

text: fermented kohlrabi 7

text: 32.12 N 112.02 E

text: food metagenome


text: Hubei University of Arts and Science

text: live

text: Metagenome or environmental

text: fermented kohlrabi 8

text: 32.12 N 112.02 E

text: food metagenome


text: Hubei University of Arts and Science

text: live

text: Metagenome or environmental

text: fermented kohlrabi 9

text: 32.12 N 112.02 E

text: food metagenome


text: Hubei University of Arts and Science

text: live

text: Metagenome or environmental

text: fermented kohlrabi 10

text: 32.12 N 112.02 E

text: food metagenome


text: Hubei University of Arts and Science

text: live

text: Metagenome or environmental

text: fermented kohlrabi 11

text: 32.12 N 112.02 E

text: food metagenome


text: Hubei University of Arts and Science

text: live

text: Metagenome or environmental

text: fermented kohlrabi 12

text: 32.12 N 112.02 E

text: food metagenome


text: Hubei University of Arts and Science

text: live

text: Metagenome or environmental

text: fermented kohlrabi 13

text: 32.12 N 112.02 E

text: food metagenome


text: Hubei University of Arts and Science

text: live

text: Metagenome or environmental

text: fermented kohlrabi 14

text: 32.12 N 112.02 E

text: food metagenome


text: Hubei University of Arts and Science

text: live

text: Metagenome or environmental

text: fermented kohlrabi 15

text: 32.12 N 112.02 E

text: food metagenome


text: Hubei University of Arts and Science

text: live

text: Metagenome or environmental

text: fermented kohlrabi 16

text: 32.12 N 112.02 E

text: food metagenome


text: Hubei University of Arts and Science

text: live

text: Metagenome or environmental

text: fermented kohlrabi 17

text: 32.12 N 112.02 E

text: food metagenome


text: Hubei University of Arts and Science

text: live

text: Metagenome or environmental

text: fermented kohlrabi 18

text: 32.12 N 112.02 E

text: food metagenome


text: Hubei University of Arts and Science

text: live

text: Metagenome or environmental

text: fermented kohlrabi 19

text: 32.12 N 112.02 E

text: food metagenome


text: Hubei University of Arts and Science

text: live

text: Metagenome or environmental

text: fermented kohlrabi 20

text: 32.12 N 112.02 E

text: food metagenome


text: Hubei University of Arts and Science

text: live

text: Metagenome or environmental

text: fermented kohlrabi 21

text: 32.12 N 112.02 E

text: food metagenome


text: Hubei University of Arts and Science

text: live

text: Metagenome or environmental

text: fermented kohlrabi 22

text: 32.12 N 112.02 E

text: food metagenome


text: Hubei University of Arts and Science

text: live

text: Metagenome or environmental

text: fermented kohlrabi 23

text: 32.12 N 112.02 E

text: food metagenome


text: Hubei University of Arts and Science

text: live

text: Metagenome or environmental

text: fermented kohlrabi 24

text: 32.12 N 112.02 E

text: food metagenome


text: Banaras Hindu University

text: live

text: Microbe, viral or environmental

characteristic: collection date

characteristic: culture collection

text: India

characteristic: geo loc name

text: Agricultural field

characteristic: isolation source

text: Azospirillum argentinense

text: soil sample

characteristic: sample type

text: Microbe sample from Azospirillum argentinense


characteristic: External Id

text: Banaras Hindu University

text: live

text: Microbe, viral or environmental

text: India:Varanasi

text: Agricultural field

text: Azospirillum argentinense

text: soil sample


text: meat

characteristic: IFSAC+ Category

characteristic: INSDC center name

text: live

characteristic: PublicAccession

text: environmental/food/other

text: FL DOH

characteristic: collected by

text: Escherichia

characteristic: genus

text: USA:FL

text: ground meat

text: meat (ground):FOODON_00000072

characteristic: ontological term

text: Escherichia coli O26

text: food

characteristic: source type

text: coli

characteristic: species

text: Pathogen: environmental/food/other sample from Escherichia coli O26


text: University of Maryland, Baltimore

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Dr. Michelle Michalski

characteristic: biomaterial provider

text: infective L3

characteristic: dev stage

text: Aedes aegypti

characteristic: host

text: Brugia malayi

characteristic: organism

characteristic: sample id

characteristic: strain

text: whole organism

characteristic: tissue

text: Model organism or animal sample from Brugia malayi

characteristic: title


Deinococcus sp. K2S05-167

characteristic: External Id

text: Chinese Academy of Sciences

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: China: Guizhou

characteristic: geo loc name

text: soil from karst cave

characteristic: isolation source

text: Deinococcus cavernae

text: pure culture

characteristic: sample type

text: Deinococcus sp. K2S05-167

text: type strain of Deinococcus cavernae

characteristic: type material


Paenisporosarcina sp. K2R23-3

text: Chinese Academy of Sciences

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: China: Guizhou

text: rock from karst cave

text: Paenisporosarcina cavernae

text: pure culture

text: Paenisporosarcina sp. K2R23-3

text: type strain of Paenisporosarcina cavernae


Oleomonas sp. K1W22B-8

text: Chinese Academy of Sciences

text: live

text: Microbe, viral or environmental

text: China: Guizhou

text: water from karst cave

text: Oleomonas cavernae

characteristic: organism

text: pure culture

text: Oleomonas sp. K1W22B-8

text: type strain of Oleomonas cavernae


Azospirillum sp. K2W22B-5

text: Chinese Academy of Sciences

text: live

text: Microbe, viral or environmental

text: China: Guizhou

text: water from karst cave

text: Azospirillum cavernae

text: pure culture

text: Azospirillum sp. K2W22B-5

text: type strain of Azospirillum cavernae


Sphingomonas sp. K2R01-6

text: Chinese Academy of Sciences

text: live

text: Microbe, viral or environmental

text: China: Guizhou

text: rock from karst cave

text: Sphingomonas cavernae

text: pure culture

text: Sphingomonas sp. K2R01-6

text: type strain of Sphingomonas cavernae


Herbaspirillum sp. K2R10-39

text: Chinese Academy of Sciences

text: live

text: Microbe, viral or environmental

text: China: Guizhou

text: rock from karst cave

text: Noviherbaspirillum cavernae

text: pure culture

text: Herbaspirillum sp. K2R10-39

text: type strain of Noviherbaspirillum cavernae


Herbaspirillum sp. K1R23-30

text: Chinese Academy of Sciences

text: live

text: Microbe, viral or environmental

text: China: Guizhou

text: soil from karst cave

text: Noviherbaspirillum saxi

text: pure culture

text: Herbaspirillum sp. K1R23-30

text: type strain of Noviherbaspirillum saxi


Massilia sp. K1S02-61

text: Chinese Academy of Sciences

text: live

text: Microbe, viral or environmental

text: China: Guizhou

text: soil from karst cave

text: Massilia cavernae

text: pure culture

text: Massilia sp. K1S02-61

text: type strain of Massilia cavernae


Noviherbaspirillum sp. K1S02-23

text: Chinese Academy of Sciences

text: live

text: Microbe, viral or environmental

text: China: Guizhou

text: soil from karst cave

text: Noviherbaspirillum sedimenti

text: pure culture

text: Noviherbaspirillum sp. K1S02-23

text: type strain of Noviherbaspirillum sedimenti


Pseudomonas sp. K1S02-6

text: Chinese Academy of Sciences

text: live

text: Microbe, viral or environmental

text: China: Guizhou

text: soil from karst cave

text: Pseudomonas cavernicola

text: pure culture

text: Pseudomonas sp. K1S02-6

text: type strain of Pseudomonas cavernicola


Pseudomonas sp. K2W31S-8

text: Chinese Academy of Sciences

text: live

text: Microbe, viral or environmental

text: China: Guizhou

text: water from karst cave

text: Pseudomonas cavernae

text: pure culture

text: Pseudomonas sp. K2W31S-8

text: type strain of Pseudomonas cavernae


text: Fuchou Tang, Biodynamics Optical Imaging Center (BIOPIC), Peking University

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

characteristic: patient diagnosis

text: patient 15 tumor tissue region 2

text: patient 15

characteristic: subject id

text: tumor tissue


characteristic: External Id

text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 26 adjacent normal tissue region 1

text: patient 26

text: adjacent normal tissue

characteristic: tissue

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 25 tumor tissue

text: patient 25

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 25 adjacent normal tissue region 1 and region 2

text: patient 25

text: adjacent normal tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 22 adjacent normal tissue region 2

text: patient 22

text: adjacent normal tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 22 tumor tissue

text: patient 22

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 22 adjacent normal tissue region 1

text: patient 22

text: adjacent normal tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 20 tumor tissue

text: patient 20

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 20 adjacent normal tissue region 2

text: patient 20

text: adjacent normal tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 20 adjacent normal tissue region 1

text: patient 20

text: adjacent normal tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 19 adjacent normal tissue region 3

text: patient 19

text: adjacent normal tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 19 adjacent normal tissue region 1

text: patient 19

text: adjacent normal tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 19 tumor tissue

text: patient 19

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 19 adjacent normal tissue region 2

text: patient 19

text: adjacent normal tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 17 tumor tissue

text: patient 17

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 17 adjacent normal tissue region 2

text: patient 17

text: adjacent normal tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 17 adjacent normal tissue region 1

text: patient 17

text: adjacent normal tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 16 normal tissue region1 and region 2

text: patient 16

text: normal tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 16 normal tissue region 1

text: patient 16

text: normal tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 15 tumor tissue region 3

text: patient 15

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 15 lymphatic metastasis tissue

text: patient 15

text: lymphatic metastasis tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 15 tumor tissue region 2

text: patient 15

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 15 tumor tissue region 1

text: patient 15

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 13 adjacent normal tissue

text: patient 13

text: adjacent normal tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 13 second tumor tissue region 3

text: patient 13

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 13 second tumor tissue region 2

text: patient 13

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 13 second tumor tissue region 1

text: patient 13

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 13 first tumor tissue

text: patient 13

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 12 tumor tissue region 1 and adjacent normal tissue

text: patient 12

text: tumor tissue and adjacent normal tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 12 tumor tissue region 2

text: patient 12

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 12 tumor tissue region 1

text: patient 12

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 12 lymphoid tissue

text: patient 12

text: lymphoid tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 11 tumor tissue region 1

text: patient 11

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 11 adjacent normal tissue

text: patient 11

text: adjacent normal tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 11 tumor tissue region 3

text: patient 11

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 11 tumor tissue region 2

text: patient 11

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 10 adjacent normal tissue

text: patient 10

text: adjacent normal tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 10 tumor tissue region 3

text: patient 10

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 10 tumor tissue region 2

text: patient 10

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 10 tumor tissue region 1

text: patient 10

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 9 lymphoid tissue

text: patient 9

text: lymphoid tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 27 tumor tissue and adjacent normal tissue region 1

text: patient 27

text: tumor tissue and adjacent normal tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 26 tumor tissue and adjacent normal tissue region 2

text: patient 26

text: tumor tissue and adjacent normal tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 9 tumor tissue region 4

text: patient 9

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 9 tumor tissue region 3

text: patient 9

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 9 tumor tissue region 2

text: patient 9

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 9 tumor tissue region 1

text: patient 9

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 9 adjacent normal tissue

text: patient 9

text: adjacent normal tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 6 tumor tissue region 3

text: patient 6

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 6 adjacent normal tissue

text: patient 6

text: adjacent normal tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 6 tumor tissue region 3 and adjacent normal tissue

text: patient 6

text: tumor tissue and adjacent normal tissue


text: Fuchou Tang, Biodynamics Optical Imaging Center (BIOPIC), Peking University

text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 6 tumor tissue region 1 and region 3

text: patient 6

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 6 tumor tissue region 2

text: patient 6

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 6 tumor tissue region 1

text: patient 6

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 5 tumor tissue region 3 and adjacent normal tissue

text: patient 5

text: tumor tissue and adjacent normal tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 5 tumor tissue region 1 and region 2

text: patient 5

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 5 adjacent normal tissue

text: patient 5

text: adjacent normal tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 5 tumor tissue region 3

text: patient 5

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 5 tumor tissue region 2

text: patient 5

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 5 tumor tissue region 1

text: patient 5

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 4 tumor tissue region 3 and adjacent normal tissue

text: patient 4

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 4 tumor tissue region 1 and region 2

text: patient 4

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 4 adjacent normal tissue

text: patient 4

text: adjacent normal tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 4 tumor tissue region 3

text: patient 4

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 4 tumor tissue region 2

text: patient 4

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 4 tumor tissue region 1

text: patient 4

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 15 adjacent normal tissue

text: patient 15

text: adjacent normal tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 3 adjacent normal tissue

text: patient 3

text: adjacent normal tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 3 tumor tissue region 1 and region 2

text: patient 3

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 3 tumor tissue region 2

text: patient 3

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 3 tumor tissue region 1

text: patient 3

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 2 tumor tissue region 2 and adjacent normal tissue

text: patient 2

text: tumor tissue and adjacent normal tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 2 tumor tissue region 2

text: patient 2

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 2 tumor tissue region 1

text: patient 2

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 2 tumor tissue and adjacent normal tissue

text: patient 2

text: tumor tissue and adjacent normal tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 1 tumor tissue and adjacent normal tissue

text: patient 1

text: tumor tissue and adjacent normal tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 1 tumor tissue

text: patient 1

text: tumor tissue


text: live

text: Generic

text: Homo sapiens

text: non-small cell lung cancer (NSCLC)

text: patient 9 lymphoid tissue

text: patient 9

text: lymphoid tissue


Cecal fezes ICC

text: UFPR

text: live

text: Model organism or animal

characteristic: age

text: Cobb 500

characteristic: breed

characteristic: collection date

text: Cecal microbiota in broiler chickens fed with additives was sequenced and analysed.

characteristic: description

text: Brazil:Parana

characteristic: geo loc name

text: Broiler chickens

characteristic: host

text: 25.428889 S 49.2675 W

characteristic: lat lon

text: Gallus gallus

text: pooled male and female

characteristic: sex

text: Cecal content

text: Model organism or animal sample from Gallus gallus


Nocardioides sp. K1W22B-1

text: Chinese Academy of Sciences

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: China: Guizhou

text: water from karst cave

characteristic: isolation source

text: Nocardioides cavernaquae

characteristic: organism

text: pure culture

characteristic: sample type

characteristic: strain

text: Nocardioides sp. K1W22B-1

text: type strain of Nocardioides cavernaquae

characteristic: type material


E. aerogenes API_7508036

characteristic: External Id

text: BIOMERIEUX

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: Klebsiella aerogenes

text: Cell culture

text: ATCC 13048

text: Microbe sample from Klebsiella aerogenes

characteristic: title

text: type strain of Enterobacter aerogenes

characteristic: type-material


E. coli API_0801027

text: BIOMERIEUX

text: live

text: Microbe, viral or environmental

text: Standard strain for various Pharmacopeia (EU, US, JP)

characteristic: isolate

text: Escherichia coli ATCC 8739

text: Cell culture

text: ATCC 8739

text: Microbe sample from Escherichia coli ATCC 8739


text: Microbiology, University of Pennsylvania

text: live

characteristic: INSDC status

text: Generic

characteristic: agent

text: Bone marrow-derived macrophages

characteristic: cell type

characteristic: genotype

text: Mus musculus

text: Csf2-/- BMDM


text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Bone marrow-derived macrophages

text: Mus musculus

characteristic: organism

text: Csf2-/- BMDM


text: live

text: Generic

text: Bone marrow-derived macrophages

text: wild type

text: Mus musculus

text: WT BMDM

characteristic: strain


characteristic: External Id

text: live

text: Generic

text: Bone marrow-derived macrophages

text: wild type

text: Mus musculus

text: WT BMDM


text: OARSA/CFSAN/FDA

characteristic: INSDC center name

text: live

text: Pathogen.cl

text: USA

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: gastroenteritis

characteristic: host disease

text: stool

characteristic: isolation source

text: Hepatovirus A

text: Pathogen: clinical or host-associated sample from Hepatovirus A


text: Hainan University

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: Selenicereus monacanthus

text: stem tissues

text: stem

characteristic: tissue

text: Normal N3

characteristic: title


text: Hainan University

text: live

characteristic: INSDC status

text: Generic

text: Selenicereus monacanthus

text: stem tissues

text: stem

text: Normal N2


text: Hainan University

text: live

text: Generic

characteristic: NCBI submission model

text: Selenicereus monacanthus

text: stem tissues

text: stem

text: Diseased D3


text: Hainan University

text: live

text: Generic

characteristic: NCBI submission package

text: Selenicereus monacanthus

text: stem tissues

text: stem

text: Diseased D1


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: BLOOD

characteristic: body site

text: HMB-IRB-MDS

text: No

characteristic: is tumor

text: Homo sapiens

characteristic: organism

text: male

characteristic: sex

text: Prospective Longitudinal Cohort

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Non-tumor DNA sample from BLOOD of a human male participant in the dbGaP study National Heart Lung and Blood Institute (NHLBI) GO-ESP: Heart Cohorts Component of the Exome Sequencing Project (FHS)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: DNA

text: BLOOD

text: HMB-IRB-NPU-MDS

text: No

text: Homo sapiens

text: female

text: Prospective Longitudinal Cohort

text: Non-tumor DNA sample from BLOOD of a human female participant in the dbGaP study National Heart Lung and Blood Institute (NHLBI) GO-ESP: Heart Cohorts Component of the Exome Sequencing Project (FHS)


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

text: BLOOD

text: HMB-IRB-MDS

text: No

text: Homo sapiens

text: female

text: Prospective Longitudinal Cohort

text: National Heart Lung and Blood Institute (NHLBI) GO-ESP: Heart Cohorts Component of the Exome Sequencing Project (FHS)

characteristic: title


text: University of Florida

characteristic: INSDC secondary accession

text: live

text: Plant

characteristic: SRA accession

text: adult

characteristic: dev stage

text: Spain: Canary Islands

characteristic: geo loc name

text: Aeonium aureum

text: flower

characteristic: tissue

text: Plant sample from Aeonium aureum


text: University of Florida

text: live

text: Plant

text: adult

text: Spain: Canary Islands

text: Aeonium diplocyclum

characteristic: organism

text: flower

text: Plant sample from Aeonium diplocyclum


text: University of Florida

text: live

text: Plant

text: adult

text: Spain

text: Petrosedum forsterianum

text: flower

text: Plant sample from Petrosedum forsterianum


Okeania hirsuta PAB10Feb10_1

text: University of California, San Diego

text: live

text: Microbe, viral or environmental

text: Scripps Institution of Oceanography, International Cooperative Biodiversity Groups Program

characteristic: collected by

characteristic: collection date

text: 1 m

characteristic: depth

text: Subtidal shallow benthos

characteristic: env biome

text: Panama: Bocas del Toro National Park

text: non-axenic mono-cyanobacterial microbial culture inoculated from subtidal seagrass beds

characteristic: isolation source

text: Okeania hirsuta

text: 0.5 g wet weight

text: non-axenic culture

characteristic: sample type

characteristic: strain

text: 28 deg C

characteristic: temp

text: Okeania hirsuta PAB10Feb10-1 genome assembly

text: reference strain of Okeania hirsuta

characteristic: type-material


DI 16-5

characteristic: External Id

text: University of Tennessee

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Homo sapiens

characteristic: host

text: Aspergillus fumigatus

text: DI 16-5

text: Pathogen: clinical or host-associated sample from Aspergillus fumigatus


DI 16-6

text: University of Tennessee

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: SRA accession

text: Homo sapiens

text: Aspergillus fumigatus

characteristic: organism

text: DI 16-6

characteristic: title


DI 16-7

text: University of Tennessee

text: live

text: Pathogen.cl

text: Homo sapiens

text: Aspergillus fumigatus

text: DI 16-7


DI 16-8

text: University of Tennessee

text: live

text: Pathogen.cl

text: Homo sapiens

text: Aspergillus fumigatus

text: DI 16-8


DI 16-9

text: University of Tennessee

text: live

text: Pathogen.cl

text: Homo sapiens

text: Aspergillus fumigatus

text: DI 16-9


DI 15-95

text: University of Tennessee

text: live

text: Pathogen.cl

text: Homo sapiens

text: Aspergillus fumigatus

text: DI 15-95


DI 15-96

text: University of Tennessee

text: live

text: Pathogen.cl

text: Homo sapiens

text: Aspergillus fumigatus

text: DI 15-96


DI 15-97

text: University of Tennessee

text: live

text: Pathogen.cl

text: Homo sapiens

text: Aspergillus fumigatus

text: DI 15-97


DI 15-98

text: University of Tennessee

text: live

text: Pathogen.cl

text: Homo sapiens

text: Aspergillus fumigatus

text: DI 15-98


DI 15-99

text: University of Tennessee

text: live

text: Pathogen.cl

text: Homo sapiens

text: Aspergillus fumigatus

text: DI 15-99


DI 15-100

text: University of Tennessee

text: live

text: Pathogen.cl

text: Homo sapiens

text: Aspergillus fumigatus

text: DI 15-100


DI 15-102

text: University of Tennessee

text: live

text: Pathogen.cl

text: Homo sapiens

text: Aspergillus fumigatus

text: DI 15-102


DI 15-103

text: University of Tennessee

text: live

text: Pathogen.cl

text: Homo sapiens

text: Aspergillus fumigatus

text: DI 15-103


DI 15-105

text: University of Tennessee

text: live

text: Pathogen.cl

text: Homo sapiens

text: Aspergillus fumigatus

text: DI 15-105


DI 15-106

text: University of Tennessee

text: live

text: Pathogen.cl

text: Homo sapiens

text: Aspergillus fumigatus

text: DI 15-106


DI 15-107

text: University of Tennessee

text: live

text: Pathogen.cl

text: Homo sapiens

text: Aspergillus fumigatus

text: DI 15-107


DI 15-108

text: University of Tennessee

text: live

text: Pathogen.cl

text: Homo sapiens

text: Aspergillus fumigatus

text: DI 15-108


DI 15-109

text: University of Tennessee

text: live

text: Pathogen.cl

text: Homo sapiens

text: Aspergillus fumigatus

text: DI 15-109


DI 15-110

text: University of Tennessee

text: live

text: Pathogen.cl

text: Homo sapiens

text: Aspergillus fumigatus

text: DI 15-110


DI 15-111

text: University of Tennessee

text: live

text: Pathogen.cl

text: Homo sapiens

text: Aspergillus fumigatus

text: DI 15-111


DI 15-114

text: University of Tennessee

text: live

text: Pathogen.cl

text: Homo sapiens

text: Aspergillus fumigatus

text: DI 15-114


DI 15-115

text: University of Tennessee

text: live

text: Pathogen.cl

text: Homo sapiens

text: Aspergillus fumigatus

text: DI 15-115


DI 15-116

text: University of Tennessee

text: live

text: Pathogen.cl

text: Homo sapiens

text: Aspergillus fumigatus

text: DI 15-116


DI 15-117

text: University of Tennessee

text: live

text: Pathogen.cl

text: Homo sapiens

text: Aspergillus fumigatus

text: DI 15-117


DI 15-118

text: University of Tennessee

text: live

text: Pathogen.cl

text: Homo sapiens

text: Aspergillus fumigatus

text: DI 15-118


DI 15-120

text: University of Tennessee

text: live

text: Pathogen.cl

text: Homo sapiens

text: Aspergillus fumigatus

text: DI 15-120


WT

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: WT

characteristic: genotype

text: USA: Missouri

characteristic: geo loc name

text: Homo sapiens

text: Cryptococcus neoformans

text: cell culture

text: Microbe sample from Cryptococcus neoformans


text: live

text: Microbe, viral or environmental

text: USA: Missouri

text: Homo sapiens

text: Cryptococcus neoformans

text: cell culture

characteristic: sample type

characteristic: strain


characteristic: External Id

text: Jiangxi Agricultural University

text: live

text: Plant

text: 5 leaves

characteristic: age

text: Bawangbian

characteristic: cultivar

text: This study is helpful to further deepen the interaction between plant and nematode.

characteristic: description

text: China: Jiangxi

text: Oryza sativa

text: root

characteristic: tissue

text: Plant sample from Oryza sativa


text: University of California Irvine

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: 88 days

text: Peromyscus Genetic Stock Center LL colony; founders from USA:NC

text: population of organisms

characteristic: env feature

text: 2.5 Gb

characteristic: estimated size

text: USA:CA

text: uninfected

characteristic: infection

characteristic: isolate

text: 33.641 N 117.844 W

characteristic: lat lon

text: Peromyscus leucopus

text: diploid

characteristic: ploidy

text: eukaryote:sexual

characteristic: propagation

text: male

characteristic: sex

text: normal ear skin

text: MIGS Eukaryotic sample from Peromyscus leucopus


characteristic: External Id

text: University of California Irvine

characteristic: INSDC secondary accession

text: live

characteristic: NCBI submission package

characteristic: SRA accession

text: 493 days

text: mating pair H-1055

characteristic: collection date

text: population of organisms

text: 2.5 Gb

text: USA:CA

characteristic: geo loc name

text: Borreliella burgdorferi Sh-2-82

text: 33.641 N 117.844 W

text: Peromyscus leucopus

characteristic: organism

text: diploid

text: eukaryote:sexual

text: female

characteristic: sec

text: ear skin at 5 wks infection

characteristic: title


text: University of Oxford

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Plant

characteristic: NCBI submission model

text: Cambridge University BG

characteristic: biomaterial provider

text: mature

characteristic: dev stage

text: Aeonium aureum

text: leaf

characteristic: tissue

text: Plant sample from Aeonium aureum


characteristic: External Id

text: University of Oxford

text: live

text: Plant

text: Chelsea Physic Garden

text: mature

characteristic: isolate

text: Aeonium canariense subsp. virgineum

text: virgineum

text: leaf

text: Plant sample from Aeonium canariense subsp. virgineum


text: USFDA

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

text: USA:MD

text: Wheat flour, unbleached

characteristic: isolation source

text: Aspergillus neotritici

text: DNA

characteristic: sample type

characteristic: strain

text: Aspergillus tritici from environmental/food/other sampling