text: live

text: Generic

text: Vitis vinifera

text: GEO accession GSM3733855 is currently private and is scheduled to be released on Nov 30, 2022.


status: PUBLIC

characteristic: External Id

text: MedBiotech laboratory, faculty of medicine and pharmacy, rabat/ Mohamed V university rabat

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

tag: attribute

characteristic: collection date

text: Morocco: Merzouga

characteristic: geo loc name

text: desert sand

characteristic: isolation source

text: Enterobacter hormaechei

characteristic: organism

text: whole genome

characteristic: sample type

characteristic: strain

text: Microbe sample from Enterobacter hormaechei

characteristic: title


text: The Forsyth Institute

text: live

text: Microbe, viral or environmental

text: 100 m

characteristic: altitude

text: Floyd E. Dewhirst, The Forsyth Institute, 245 First Street, Cambridge, Massachusetts, 02144

characteristic: biomaterial provider

text: Forsyth Institute

characteristic: collected by

text: USA: Los Angeles, California

text: Homo sapiens

characteristic: host

characteristic: host age

text: male

characteristic: host sex

text: human oral cavity UCLA2

text: Actinomyces sp. oral taxon 171 strain F0337

characteristic: lab host

text: 34.07 N 118.45 W

characteristic: lat lon

text: Candidatus Nanosynbacter featherlites

text: whole organism

text: Saccharibacteria bacterium HMT-957 strain BB001


characteristic: External Id

text: clinical/research| human

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

characteristic: PublicAccession

text: clinical/host-associated

text: Carlos Blondel lab, Universidad Autonoma

text: Campylobacter

characteristic: genus

text: Chile

text: Homo sapiens

characteristic: ontological term

text: Campylobacter sp. CFSAN093261

text: human

characteristic: source type

text: sp.

characteristic: species

text: Pathogen: clinical or host-associated sample from Campylobacter sp. CFSAN093261


text: clinical/research| human

text: live

text: Pathogen.cl

characteristic: SRA accession

text: clinical/host-associated

characteristic: collected by

characteristic: collection date

text: Campylobacter

text: Chile

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: Campylobacter coli

characteristic: organism

text: human

text: coli

characteristic: strain

text: Pathogen: clinical or host-associated sample from Campylobacter coli

characteristic: title


characteristic: External Id

text: clinical/research| human

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

text: clinical/host-associated

text: Campylobacter

text: Chile

text: Homo sapiens

text: Campylobacter sp. CFSAN093232

text: human

text: sp.

text: Pathogen: clinical or host-associated sample from Campylobacter sp. CFSAN093232


text: clinical/research| human

text: live

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

characteristic: PublicAccession

text: clinical/host-associated

text: Campylobacter

characteristic: genus

text: Chile

text: Homo sapiens

characteristic: ontological term

text: Campylobacter sp. CFSAN093246

text: human

characteristic: source type

text: sp.

text: Pathogen: clinical or host-associated sample from Campylobacter sp. CFSAN093246


text: clinical/research| human

text: live

text: Pathogen.cl

characteristic: SRA accession

text: clinical/host-associated

characteristic: collected by

characteristic: collection date

text: Campylobacter

text: Chile

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: Campylobacter sp. CFSAN093225

characteristic: organism

text: human

text: sp.

characteristic: species

text: Pathogen: clinical or host-associated sample from Campylobacter sp. CFSAN093225


characteristic: External Id

text: clinical/research| human

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.cl

text: clinical/host-associated

text: Campylobacter

text: Chile

text: Homo sapiens

text: Campylobacter sp. CFSAN093247

text: human

text: sp.

characteristic: strain

text: Pathogen: clinical or host-associated sample from Campylobacter sp. CFSAN093247

characteristic: title


text: clinical/research| human

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

characteristic: PublicAccession

text: clinical/host-associated

text: Campylobacter

characteristic: genus

text: Chile

text: Homo sapiens

text: Campylobacter sp. CFSAN093245

text: human

text: sp.

text: Pathogen: clinical or host-associated sample from Campylobacter sp. CFSAN093245


text: clinical/research| human

text: live

text: Pathogen.cl

characteristic: SRA accession

text: clinical/host-associated

characteristic: collected by

characteristic: collection date

text: Campylobacter

text: Chile

characteristic: geo loc name

text: Homo sapiens

characteristic: host

characteristic: ontological term

text: Campylobacter jejuni

text: human

characteristic: source type

text: sp.

text: Pathogen: clinical or host-associated sample from Campylobacter jejuni


characteristic: External Id

text: clinical/research| human

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.cl

text: clinical/host-associated

text: Campylobacter

text: Chile

text: Homo sapiens

text: Campylobacter sp. CFSAN093229

characteristic: organism

text: human

text: sp.

characteristic: species

text: Pathogen: clinical or host-associated sample from Campylobacter sp. CFSAN093229


text: clinical/research| human

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

text: clinical/host-associated

text: Campylobacter

text: Chile

text: Homo sapiens

text: Campylobacter sp. CFSAN093241

text: human

text: sp.

characteristic: strain

text: Pathogen: clinical or host-associated sample from Campylobacter sp. CFSAN093241

characteristic: title


text: clinical/research| human

text: live

text: Pathogen.cl

characteristic: PublicAccession

characteristic: SRA accession

text: clinical/host-associated

characteristic: collected by

characteristic: collection date

text: Campylobacter

characteristic: genus

text: Chile

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: Campylobacter sp. CFSAN093239

text: human

text: sp.

text: Pathogen: clinical or host-associated sample from Campylobacter sp. CFSAN093239


characteristic: External Id

text: clinical/research, human

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.cl

text: clinical/host-associated

text: Campylobacter

text: Chile

text: Homo sapiens

characteristic: ontological term

text: Campylobacter sp. CFSAN093252

text: human

characteristic: source type

text: sp.

text: Pathogen: clinical or host-associated sample from Campylobacter sp. CFSAN093252


text: clinical/research| human

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

text: clinical/host-associated

text: Campylobacter

text: Chile

text: Homo sapiens

text: Campylobacter sp. CFSAN093226

characteristic: organism

text: human

text: sp.

characteristic: species

text: Pathogen: clinical or host-associated sample from Campylobacter sp. CFSAN093226


text: clinical/research| human

text: live

text: Pathogen.cl

characteristic: PublicAccession

characteristic: SRA accession

text: clinical/host-associated

characteristic: collected by

characteristic: collection date

text: Campylobacter

characteristic: genus

text: Chile

text: Homo sapiens

text: Campylobacter sp. CFSAN093243

text: human

text: sp.

characteristic: strain

text: Pathogen: clinical or host-associated sample from Campylobacter sp. CFSAN093243

characteristic: title


characteristic: External Id

text: clinical/research, human

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.cl

text: clinical/host-associated

text: Campylobacter

text: Chile

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: Campylobacter sp. CFSAN093248

text: human

text: sp.

text: Pathogen: clinical or host-associated sample from Campylobacter sp. CFSAN093248


text: clinical/research, human

text: FDA Center for Food Safety and Applied Nutrition

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

text: clinical/host-associated

text: Campylobacter

text: Chile

text: Homo sapiens

characteristic: ontological term

text: Campylobacter sp. CFSAN093230

text: human

characteristic: source type

text: sp.

text: Pathogen: clinical or host-associated sample from Campylobacter sp. CFSAN093230


text: clinical/research| human

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: PublicAccession

characteristic: SRA accession

text: clinical/host-associated

text: Carlos Blondel lab, Universidad Autonoma

characteristic: collected by

characteristic: collection date

text: Campylobacter

text: Chile

text: Homo sapiens

text: Campylobacter sp. CFSAN093227

characteristic: organism

text: human

text: sp.

characteristic: species

text: Pathogen: clinical or host-associated sample from Campylobacter sp. CFSAN093227


characteristic: External Id

text: clinical/research| human

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.cl

text: clinical/host-associated

text: Campylobacter

characteristic: genus

text: Chile

text: Homo sapiens

text: Campylobacter sp. CFSAN093250

text: human

text: sp.

characteristic: strain

text: Pathogen: clinical or host-associated sample from Campylobacter sp. CFSAN093250

characteristic: title


text: clinical/research| human

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

text: clinical/host-associated

text: Campylobacter

text: Chile

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: Campylobacter sp. CFSAN093249

text: human

text: sp.

text: Pathogen: clinical or host-associated sample from Campylobacter sp. CFSAN093249


text: clinical/research| human

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: PublicAccession

characteristic: SRA accession

text: clinical/host-associated

characteristic: collected by

characteristic: collection date

text: Campylobacter

text: Chile

text: Homo sapiens

characteristic: ontological term

text: Campylobacter sp. CFSAN093224

text: human

characteristic: source type

text: sp.

text: Pathogen: clinical or host-associated sample from Campylobacter sp. CFSAN093224


characteristic: External Id

text: clinical/research| human

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.cl

text: clinical/host-associated

text: Campylobacter

characteristic: genus

text: Chile

text: Homo sapiens

text: Campylobacter sp. CFSAN093236

characteristic: organism

text: human

text: sp.

characteristic: species

text: Pathogen: clinical or host-associated sample from Campylobacter sp. CFSAN093236


text: clinical/research| human

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

text: clinical/host-associated

text: Campylobacter

text: Chile

text: Homo sapiens

text: Campylobacter sp. CFSAN093258

text: human

text: sp.

characteristic: strain

text: Pathogen: clinical or host-associated sample from Campylobacter sp. CFSAN093258

characteristic: title


text: clinical/research| human

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: PublicAccession

characteristic: SRA accession

text: clinical/host-associated

characteristic: collected by

characteristic: collection date

text: Campylobacter

text: Chile

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: Campylobacter sp. CFSAN093233

text: human

text: sp.

text: Pathogen: clinical or host-associated sample from Campylobacter sp. CFSAN093233


characteristic: External Id

text: clinical/research| human

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.cl

text: clinical/host-associated

text: Campylobacter

characteristic: genus

text: Chile

text: Homo sapiens

characteristic: ontological term

text: Campylobacter sp. CFSAN093255

text: human

characteristic: source type

text: sp.

text: Pathogen: clinical or host-associated sample from Campylobacter sp. CFSAN093255


text: clinical/research| human

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

text: clinical/host-associated

text: Campylobacter

text: Chile

text: Homo sapiens

text: Campylobacter jejuni

characteristic: organism

text: human

text: sp.

characteristic: species

text: Pathogen: clinical or host-associated sample from Campylobacter jejuni


text: clinical/research| human

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: PublicAccession

characteristic: SRA accession

text: clinical/host-associated

characteristic: collected by

characteristic: collection date

text: Campylobacter

text: Chile

text: Homo sapiens

text: Campylobacter sp. CFSAN093237

text: human

text: sp.

characteristic: strain

text: Pathogen: clinical or host-associated sample from Campylobacter sp. CFSAN093237

characteristic: title


characteristic: External Id

text: clinical/research| human

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.cl

text: clinical/host-associated

text: Campylobacter

characteristic: genus

text: Chile

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: Campylobacter sp. CFSAN093256

text: human

text: sp.

text: Pathogen: clinical or host-associated sample from Campylobacter sp. CFSAN093256


text: clinical/research| human

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

text: clinical/host-associated

text: Campylobacter

text: Chile

text: Homo sapiens

characteristic: ontological term

text: Campylobacter sp. CFSAN093259

text: human

characteristic: source type

text: sp.

text: Pathogen: clinical or host-associated sample from Campylobacter sp. CFSAN093259


text: clinical/research| human

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: PublicAccession

characteristic: SRA accession

text: clinical/host-associated

characteristic: collected by

characteristic: collection date

text: Campylobacter

text: Chile

text: Homo sapiens

text: Campylobacter sp. CFSAN093238

characteristic: organism

text: human

text: sp.

characteristic: species

text: Pathogen: clinical or host-associated sample from Campylobacter sp. CFSAN093238


characteristic: External Id

text: clinical/research| human

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.cl

text: clinical/host-associated

text: Campylobacter

characteristic: genus

text: Chile

text: Homo sapiens

text: Campylobacter sp. CFSAN093260

text: human

text: sp.

characteristic: strain

text: Pathogen: clinical or host-associated sample from Campylobacter sp. CFSAN093260

characteristic: title


text: Academia Sinica

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Agrobacterium salinitolerans

text: Agrobacterium tumefaciens strain CFBP5507


text: veterinary clinical/research| other animal

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: Cray Lab_NC State_CVM

text: Escherichia

text: USA:NC

characteristic: geo loc name

text: feces sheep

characteristic: isolation source

text: feces:UBERON_0001988, sheep:FOODON_03411183

characteristic: ontological term

text: Escherichia coli

text: animal

characteristic: source type

text: coli

text: Pathogen: environmental/food/other sample from Escherichia coli


characteristic: External Id

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: Cray Lab_NC State_CVM

characteristic: collected by

characteristic: collection date

text: Escherichia

text: USA:NC

text: Feces (Sheep)

text: feces:UBERON_0001988| sheep:FOODON_03411183

text: Escherichia coli

characteristic: organism

text: animal

text: coli

characteristic: species


text: environmental-abattoir

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: Cray Lab_NC State_CVM

text: Escherichia

characteristic: genus

text: USA:NC

text: lairage swab

text: lairage swab:CURATION_0000418

text: Escherichia coli

text: environmental

text: coli

characteristic: strain

characteristic: title


text: meat

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: Cray Lab_NC State_CVM

text: Escherichia

text: USA:NC

characteristic: geo loc name

text: Carcass swab (Goat)

characteristic: isolation source

text: carcass:UBERON_0008979, goat:FOODON_03411328, swab:NCIT_C17627

characteristic: ontological term

text: Escherichia coli

text: animal

text: coli


characteristic: External Id

text: meat| other animal

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: Cray Lab_NC State_CVM

characteristic: collected by

characteristic: collection date

text: Escherichia

text: USA:NC

text: carcass swab (Sheep)

text: sheep:FOODON_03411183| carcass:UBERON_0008979| swab:NCIT_C17627

text: Escherichia coli

text: animal

characteristic: source type

text: coli


text: environmental-water

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: Cray Lab_NC State_CVM

text: Escherichia

characteristic: genus

text: USA:NC

text: water

text: Escherichia coli

characteristic: organism

text: environmental

text: coli

characteristic: species


Bacillus hwajinpoensis from salt water

text: live

text: Microbe, viral or environmental

text: USA: New Hampshire, Hampton Beach

characteristic: geo loc name

text: salt water

text: 42.899 N 70.81085 W

characteristic: lat lon

text: Pseudalkalibacillus hwajinpoensis

text: cell culture

characteristic: sample type

characteristic: strain

text: Bacillus hwajinpoensis from salt water sample

characteristic: title


tag: Namespace:DOE Joint Genome Institute

characteristic: External Id

text: Host-associated | Mammals | Digestive system | Stomach | Rumen

characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: USA: California

text: Bos taurus

characteristic: host

text: bovine rumen

characteristic: isolation source

text: 38.5357 N 121.7593 W

text: bovine gut metagenome

text: Metatranscriptome of bovine rumen microbial communities from UC Davis, California, United States - 0_2496_0518


text: DOE Joint Genome Institute

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: collection date

text: USA: California

text: Bos taurus

text: bovine rumen

text: 38.5357 N 121.7593 W

text: bovine gut metagenome

text: Metatranscriptome of bovine rumen microbial communities from UC Davis, California, United States - 1_2617_0518


text: Host-associated | Fungi | Mycelium | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Italy: Torino

characteristic: geo loc name

text: Gigaspora margarita

text: Lab culture in axenic conditions

text: 45.0781 N 7.6761 E

text: fungus metagenome

characteristic: organism

text: Metatranscriptome of Gigaspora margarita BEG34 co-culture with Lotus japonicus - EM rep2


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Italy: Torino

text: Gigaspora margarita

text: Lab culture in axenic conditions

text: 45.0781 N 7.6761 E

characteristic: lat lon

text: fungus metagenome

text: Metatranscriptome of Gigaspora margarita BEG34 co-culture with Lotus japonicus - EM rep3


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Italy: Torino

text: Gigaspora margarita

text: Lab culture in axenic conditions

text: 45.0781 N 7.6761 E

text: fungus metagenome

text: Metatranscriptome of Gigaspora margarita BEG34 co-culture with Lotus japonicus - EM rep1

characteristic: title


characteristic: External Id

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: Bos taurus

text: bovine rumen

text: 38.5357 N 121.7593 W

text: bovine gut metagenome

text: Metatranscriptome of bovine rumen microbial communities from UC Davis, California, United States - 3_2548_0518


characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: Bos taurus

text: bovine rumen

text: 38.5357 N 121.7593 W

text: bovine gut metagenome

text: Metatranscriptome of bovine rumen microbial communities from UC Davis, California, United States - 2_2465_0518


text: Engineered | Bioreactor | SSF (Solid state fermentation) | Aerobic | Biomass

text: DOE Joint Genome Institute

characteristic: INSDC center name

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - SM_Day2_7


text: DOE Joint Genome Institute

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - SM_Day12_7


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - SM_Day12_2


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - WT_Day12_9


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - SM_Day9_2


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - WT_Day9_7


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - SM_Day2_9


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - SM_Day2_2


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - SM_Day2_1


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - SM_Day5_2


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - SM_Day5_7


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - SM_Day9_1


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - SM_Day9_8


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - WT_Day5_8


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - SM_Day12_9


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - WT_Day2_7


text: Engineered | Bioreactor | SSF (Solid state fermentation) | Aerobic | Biomass

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - SM_Day2_3


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - SM_Day2_8


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - SM_Day7_1


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - SM_Day7_7


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - WT_Day2_9


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - SM_Day12_8


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - WT_Day7_8


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - WT_Day9_9


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - SM_Day9_9


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - WT_Day12_7


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - SM_Day12_3


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - SM_Day5_3


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - SM_Day9_3


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - SM_Day7_3


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - SM_Day7_9


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - SM_Day7_8


text: Engineered | Bioreactor | SSF (Solid state fermentation) | Aerobic | Biomass

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - SM_Day5_8


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - WT_Day2_8


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - WT_Day12_8


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - SM_Day9_7


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - WT_Day9_8


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - SM_Day7_2


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - WT_Day7_9


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - WT_Day7_7


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - SM_Day5_9


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - WT_Day5_9


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: enrichment cultures

text: 37.8406 N 122.2901 W

text: phyllosphere metagenome

text: Metatranscriptome of lab enriched sorghum-adapted microbial communities from California, United States - WT_Day5_7


text: DOE Joint Genome Institute

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Rhizopus microsporus var. chinensis

text: NRRL 2906

characteristic: strain

text: Rhizopus chinensis NRRL 2906 Resequencing

text: chinensis

characteristic: variety


text: Ocean University of China

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: China: Northwest Pacific Ocean

text: Surface seawater

characteristic: isolation source

text: 22.12 N 123.02 E

text: marine metagenome

text: Metagenome or environmental sample from marine metagenome


text: Ocean University of China

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: collection date

text: China: Northwest Pacific Ocean

text: Deep-sea water (3500m)

text: 22.12 N 123.02 E

text: marine metagenome


text: Ocean University of China

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: China: South China Sea

characteristic: geo loc name

text: Surface seawater

text: 21.01 N 119.57 E

text: marine metagenome

characteristic: organism


characteristic: External Id

text: Ocean University of China

text: live

text: Metagenome or environmental

text: China: South China Sea

text: Deep-sea water (3000m)

text: 21.01 N 119.57 E

characteristic: lat lon

text: marine metagenome

characteristic: title


text: Ocean University of China

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: China: South China Sea

text: Surface seawater

text: 18.01 N 115.96 E

text: marine metagenome


text: Ocean University of China

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: China: South China Sea

text: Deep-sea water (3000m)

text: 18.01 N 115.96 E

text: marine metagenome


text: Ocean University of China

text: live

text: Metagenome or environmental

text: China: South China Sea

text: Surface seawater

text: 16.56 N 115.46 E

text: marine metagenome


text: Ocean University of China

text: live

text: Metagenome or environmental

text: China: South China Sea

text: Deep-sea water (2000m)

text: 16.56 N 115.46 E

text: marine metagenome


text: Ocean University of China

text: live

text: Metagenome or environmental

text: China: South China Sea

text: Surface seawater

text: 15.24 N 114.85 E

text: marine metagenome


text: Ocean University of China

text: live

text: Metagenome or environmental

text: China: South China Sea

text: Deep-sea water (2000m)

text: 15.24 N 114.85 E

text: marine metagenome


text: institute of microbiology,chinese academy of sciences

text: live

text: Microbe, viral or environmental

text: China: Hebei

text: water

characteristic: isolation-source

text: Sphingomonas baiyangensis

text: cell culture

characteristic: sample type

text: L-1-4 w-11

characteristic: strain

text: Microbe sample from Sphingomonas sp.L-1-4w-11

text: type strain of Sphingomonas baiyangensis

characteristic: type-material


name: Murrah Buffalo - 160015118507 Sire Haplotype

text: Nucleome Informatics Pvt. Ltd.

characteristic: Data Provider

text: National Dairy Development Board

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Model organism or animal

text: Murrah

characteristic: breed

text: Adult Heifer

text: Bubalus bubalis

text: female

characteristic: sex

text: Blood

characteristic: tissue

text: Model organism or animal sample from Bubalus bubalis


name: Murrah Buffalo - 160015118507 Dam Haplotype

text: Nucleome Informatics Pvt. Ltd.

text: National Dairy Development Board

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Murrah

text: Adult Heifer

text: Bubalus bubalis

characteristic: organism

text: female

text: Blood


characteristic: External Id

text: 福建农林大学

characteristic: INSDC center name

text: live

text: Generic

text: 3 week old

characteristic: age

text: Phyllostachys edulis

text: seedlings

characteristic: title

text: Cold for 24 h

characteristic: treatment


text: 福建农林大学

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: 3 week old

text: Phyllostachys edulis

text: seedlings

text: Cold for 1 h


text: 福建农林大学

text: live

text: Generic

text: 3 week old

text: Phyllostachys edulis

text: seedlings

text: Cold for 0.5 h


text: 福建农林大学

text: live

text: Generic

text: 3 week old

text: Phyllostachys edulis

text: seedlings

text: without cold treatment


text: seeded vegetables (legumes)

characteristic: IFSAC+ Category

text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA

characteristic: collected by

characteristic: collection date

text: USA:WA

characteristic: geo loc name

characteristic: isolate

text: frozen peas

characteristic: isolation source

text: pea (frozen):foodon_03306808

characteristic: ontological term

text: Listeria monocytogenes

text: food

characteristic: source type

text: Listeria monocytogenes


text: Dario Leister, Biologie I, Botanik, Ludwig-Maximilians-Universität München

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 5 days old

text: irx3-2 mutant

characteristic: genotype

text: LIN

characteristic: growth medium

text: Arabidopsis thaliana

text: 5-d-old seedlings

text: seedlings

characteristic: tissue


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: 5 days old

characteristic: age

text: irx3-2 mutant

text: MS

text: Arabidopsis thaliana

characteristic: organism

text: 5-d-old seedlings

text: seedlings

characteristic: title


text: live

text: Generic

text: 5 days old

text: LIN

text: Arabidopsis thaliana

text: 5-d-old seedlings

text: seedlings


text: live

text: Generic

text: 5 days old

text: MS

text: Arabidopsis thaliana

text: 5-d-old seedlings

text: seedlings


text: DOE Joint Genome Institute

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Rhizopus microsporus var. oligosporus

text: NRRL A-26124

characteristic: strain

text: Rhizopus oligosporus Saito NRRL A-26124 Resequencing

text: oligosporus

characteristic: variety


text: DOE Joint Genome Institute

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

text: Rhizopus microsporus var. oligosporus

text: NRRL A-26117

text: Rhizopus oligosporus Saito NRRL A-26117 Resequencing

text: oligosporus


text: DOE Joint Genome Institute

text: live

characteristic: INSDC status

text: MIGS.eu

characteristic: NCBI submission model

text: Keywords: GSC:MIxS;MIGS:6.0

text: Rhizopus microsporus var. chinensis

text: NRRL 3671

text: Rhizopus chinensis Saito NRRL 3671 Resequencing

text: chinensis


text: DOE Joint Genome Institute

text: live

text: MIGS.eu

characteristic: NCBI submission package

text: Keywords: GSC:MIxS;MIGS:6.0

text: Rhizopus microsporus var. chinensis

text: NRRL 2870

text: Rhizopus chinensis var. liquefaciens NRRL 2870 Resequencing

text: chinensis


text: Engineered | Modeled | Simulated communities (microbial mixture) | Unclassified | Unclassified

characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: collection date

text: USA: California

characteristic: geo loc name

text: Laboratory culture on Avicel cellulose substrate

characteristic: isolation source

text: 34.414 N 119.849 W

characteristic: lat lon

text: fungus metagenome

text: Metatranscriptome of Anaeromyces robustus S4 x Fibrobacter succinogenes UWB7 co-culture from UC Santa Barbara, California, United States - S4_UWB7_AV_R4


characteristic: External Id

text: DOE Joint Genome Institute

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: USA: California

text: 34.414 N 119.849 W

text: fungus metagenome

text: Metatranscriptome of Anaeromyces robustus S4 x Fibrobacter succinogenes UWB7 co-culture from UC Santa Barbara, California, United States - S4_UWB7_AV_R1


text: Host-associated | Plants | Phyllosphere | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Canada: Quebec

text: Pinus banksiana

characteristic: host

text: Pinus banksiana seedlings

text: 47.3131 N 73.5721 W

text: plant metagenome

characteristic: organism

text: Metatranscriptome of Pinus banksiana seedlings inoculated with aeciospores of Endocronartium harknessii from Quebec, Canada - T1J7B

characteristic: title


text: Environmental | Terrestrial | Plant litter | Unclassified | Unclassified

text: DOE Joint Genome Institute

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: USA: California

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P1 T35


text: DOE Joint Genome Institute

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: USA: California

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P1 T31


text: DOE Joint Genome Institute

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: USA: California

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P2 T29


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

text: USA: California

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P2 T28


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: USA: California

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P1 T28


characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P3 T24


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: collection date

text: USA: California

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P2 T23


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

characteristic: geo loc name

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P3 T18


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Canada: Quebec

text: Pinus banksiana

text: Pinus banksiana seedlings

characteristic: isolation source

text: 45.9369 N 76.0669 W

text: plant metagenome

text: Metatranscriptome of Pinus banksiana seedlings inoculated with aeciospores of Cronartium quercuum f. sp. banksianae from Quebec, Canada - T2J7A


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Canada: Quebec

text: Pinus banksiana

text: Pinus banksiana seedlings

text: 45.9369 N 76.0669 W

characteristic: lat lon

text: plant metagenome

text: Metatranscriptome of Pinus banksiana seedlings inoculated with aeciospores of Cronartium quercuum f. sp. banksianae from Quebec, Canada - T2J2A


characteristic: External Id

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Canada: Quebec

text: Pinus banksiana

text: Pinus banksiana seedlings

text: 47.3131 N 73.5721 W

text: plant metagenome

text: Metatranscriptome of Pinus banksiana seedlings inoculated with aeciospores of Endocronartium harknessii from Quebec, Canada - T1J90A


text: DOE Joint Genome Institute

characteristic: INSDC center name

text: live

text: Metagenome or environmental

text: Canada: Quebec

text: Pinus banksiana

text: Pinus banksiana seedlings

text: 47.3131 N 73.5721 W

text: plant metagenome

text: Metatranscriptome of Pinus banksiana seedlings inoculated with aeciospores of Endocronartium harknessii from Quebec, Canada - T1J29A


text: DOE Joint Genome Institute

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: Canada: Quebec

text: Pinus banksiana

text: Pinus banksiana seedlings

text: 47.3131 N 73.5721 W

text: plant metagenome

text: Metatranscriptome of Pinus banksiana seedlings inoculated with aeciospores of Endocronartium harknessii from Quebec, Canada - T1J7C


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: Canada: Quebec

text: Pinus banksiana

text: Pinus banksiana seedlings

text: 47.3131 N 73.5721 W

text: plant metagenome

text: Metatranscriptome of Pinus banksiana seedlings inoculated with aeciospores of Endocronartium harknessii from Quebec, Canada - T1J2C


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P3 T6


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P1 T6


text: Engineered | Artificial ecosystem | Soil microcosm | Surface biofilm | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Pennsylvania

text: Filter 'swab' of soil surface biofilm

text: 40.7997 N 77.8629 W

text: biofilm metagenome

text: Metatranscriptome of soil surface biofilm microbial communities from soil inoculated with nitrogen-fixing consortium DG1, State College, Pennsylvania, United States - MICR_N_R2


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Pennsylvania

text: Filter 'swab' of soil surface biofilm

text: 40.7997 N 77.8629 W

text: biofilm metagenome

text: Metatranscriptome of soil surface biofilm microbial communities from soil inoculated with nitrogen-fixing consortium DG1, State College, Pennsylvania, United States - STER_R1


text: Environmental | Aquatic | Marine | Fjord | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Norway: Bergen

text: fjord water

text: 60.2696 N 5.2187 E

text: seawater metagenome

text: Metatranscriptome of seawater microbial communities from Espelandsvegen Fjord, Bergen, Norway - Amb9_26May_surf


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Norway: Bergen

text: fjord water

text: 60.2696 N 5.2187 E

text: seawater metagenome

text: Metatranscriptome of seawater microbial communities from Espelandsvegen Fjord, Bergen, Norway - Plim7_26May_deep


text: Environmental | Terrestrial | Plant litter | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P3 T32


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P3 T27


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P2 T19


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P2 T11


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P2 T10


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P2 T6


text: Host-associated | Plants | Rhizoid | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Michigan

text: lab culture on sterile redi-earth

text: 42.7228 N 84.4747 W

text: moss metagenome

text: Metatranscriptome of Mortierella spp. x Physcomitrella patens Gransden 2004 co-culture from Michigan State University, East Lansing, United States - PM64(+3)


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Michigan

text: lab culture on sterile redi-earth

text: 42.7228 N 84.4747 W

text: moss metagenome

text: Metatranscriptome of Mortierella spp. x Physcomitrella patens Gransden 2004 co-culture from Michigan State University, East Lansing, United States - PM64(+2)


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Michigan

text: lab culture on sterile redi-earth

text: 42.7228 N 84.4747 W

text: moss metagenome

text: Metatranscriptome of Mortierella spp. x Physcomitrella patens Gransden 2004 co-culture from Michigan State University, East Lansing, United States - PM27(+1)


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Michigan

text: lab culture on sterile redi-earth

text: 42.7228 N 84.4747 W

text: moss metagenome

text: Metatranscriptome of Physcomitrella patens Gransden 2004 from Michigan State University, East Lansing, United States - Ppc3


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Norway: Bergen

text: fjord water

text: 60.2696 N 5.2187 E

text: seawater metagenome

text: Metatranscriptome of seawater microbial communities from Espelandsvegen Fjord, Bergen, Norway - Plim7_22May_deep


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Norway: Bergen

text: fjord water

text: 60.2696 N 5.2187 E

text: seawater metagenome

text: Metatranscriptome of seawater microbial communities from Espelandsvegen Fjord, Bergen, Norway - Plim5_28May_deep


text: Environmental | Aquatic | Marine | Oceanic | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Canada: Western Arctic Ocean

text: Arctic ocean water

text: 80.9595 N 132.1842 W

text: seawater metagenome

text: Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CBN3_1000m_313


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Michigan

text: lab culture on sterile redi-earth

text: 42.7228 N 84.4747 W

text: moss metagenome

text: Metatranscriptome of Mortierella spp. x Physcomitrella patens Gransden 2004 co-culture from Michigan State University, East Lansing, United States - PM27(-2)


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Michigan

text: lab culture on sterile redi-earth

text: 42.7228 N 84.4747 W

text: moss metagenome

text: Metatranscriptome of Physcomitrella patens Gransden 2004 from Michigan State University, East Lansing, United States - Ppc2


text: Environmental | Terrestrial | Plant litter | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P1 T17


text: Environmental | Aquatic | Marine | Fjord | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Norway: Bergen

text: fjord water

text: 60.2696 N 5.2187 E

text: seawater metagenome

text: Metatranscriptome of seawater microbial communities from Espelandsvegen Fjord, Bergen, Norway - Plim5_26May_surf


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Norway: Bergen

text: fjord water

text: 60.2696 N 5.2187 E

text: seawater metagenome

text: Metatranscriptome of seawater microbial communities from Espelandsvegen Fjord, Bergen, Norway - Amb9_24May_surf


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Norway: Bergen

text: fjord water

text: 60.2696 N 5.2187 E

text: seawater metagenome

text: Metatranscriptome of seawater microbial communities from Espelandsvegen Fjord, Bergen, Norway - Shad11_28May_surf


text: Engineered | Artificial ecosystem | Soil microcosm | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: North Carolina

text: soil

text: 36 N 78 W

text: soil metagenome

text: Metatranscriptome of soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - s81


text: Host-associated | Plants | Rhizoid | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Michigan

text: lab culture on sterile redi-earth

text: 42.7228 N 84.4747 W

text: moss metagenome

text: Metatranscriptome of Mortierella spp. x Physcomitrella patens Gransden 2004 co-culture from Michigan State University, East Lansing, United States - PM27(+2)


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P2 T27


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Norway: Bergen

text: fjord water

text: 60.2696 N 5.2187 E

text: seawater metagenome

text: Metatranscriptome of seawater microbial communities from Espelandsvegen Fjord, Bergen, Norway - Plim5_22May_deep


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Norway: Bergen

text: fjord water

text: 60.2696 N 5.2187 E

text: seawater metagenome

text: Metatranscriptome of seawater microbial communities from Espelandsvegen Fjord, Bergen, Norway - Shad8_24May_surf


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Norway: Bergen

text: fjord water

text: 60.2696 N 5.2187 E

text: seawater metagenome

text: Metatranscriptome of seawater microbial communities from Espelandsvegen Fjord, Bergen, Norway - Shad11_26May_surf


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Norway: Bergen

text: fjord water

text: 60.2696 N 5.2187 E

text: seawater metagenome

text: Metatranscriptome of seawater microbial communities from Espelandsvegen Fjord, Bergen, Norway - Amb12_24May_surf


text: Engineered | Artificial ecosystem | Soil microcosm | Surface biofilm | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Pennsylvania

text: Filter 'swab' of soil surface biofilm

text: 40.7997 N 77.8629 W

text: biofilm metagenome

text: Metatranscriptome of soil surface biofilm microbial communities from soil inoculated with nitrogen-fixing consortium DG1, State College, Pennsylvania, United States - MICR_N_R6


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Michigan

text: lab culture on sterile redi-earth

text: 42.7228 N 84.4747 W

text: moss metagenome

text: Metatranscriptome of Mortierella spp. x Physcomitrella patens Gransden 2004 co-culture from Michigan State University, East Lansing, United States - PM64(-4)


text: Host-associated | Plants | Phyllosphere | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Canada: Quebec

text: Pinus banksiana

characteristic: host

text: Pinus banksiana seedlings

text: 47.3131 N 73.5721 W

text: plant metagenome

text: Metatranscriptome of Pinus banksiana seedlings inoculated with aeciospores of Endocronartium harknessii from Quebec, Canada - T1J7A


text: Host-associated | Fungi | Sclerotium | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Switzerland: Uitikon, Zurich

text: in vitro sample

text: 47.3605 N 8.4545 E

text: fungus metagenome

characteristic: organism

text: Metatranscriptome of Cenococcum geophilum sclerotia from greenhouse in Uitikon, Zurich, Switzerland - scle_myc_Potre_R2


text: Host-associated | Plants | Roots | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Switzerland: Uitikon, Zurich

text: Pinus sylvestris

text: in vitro sample

text: 47.3605 N 8.4545 E

text: root metagenome

text: Metatranscriptome of Pinus sylvestris lateral roots inoculated with Lepidopterella palustris from greenhouse in Uitikon, Zurich, Switzerland - Myc Leppa_Pine_R1

characteristic: title


text: Environmental | Terrestrial | Plant litter | Unclassified | Unclassified

text: DOE Joint Genome Institute

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: USA: California

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P2 T14


text: DOE Joint Genome Institute

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: USA: California

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P2 T18


text: DOE Joint Genome Institute

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: USA: California

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P2 T22


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

text: USA: California

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P3 T33


text: Host-associated | Plants | Rhizoid | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: USA: Michigan

text: lab culture on sterile redi-earth

text: 42.7228 N 84.4747 W

text: moss metagenome

text: Metatranscriptome of Mortierella spp. x Physcomitrella patens Gransden 2004 co-culture from Michigan State University, East Lansing, United States - PM64(-1)


characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P3 T8


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: collection date

text: USA: California

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P3 T12


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

characteristic: geo loc name

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P3 T22


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Canada: Quebec

text: Pinus banksiana

text: Pinus banksiana seedlings

characteristic: isolation source

text: 45.9369 N 76.0669 W

text: plant metagenome

text: Metatranscriptome of Pinus banksiana seedlings inoculated with aeciospores of Cronartium quercuum f. sp. banksianae from Quebec, Canada - T2J2B


text: Host-associated | Plants | Phyllosphere | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Canada: Quebec

text: Pinus banksiana

text: Pinus banksiana seedlings

text: 45.9369 N 76.0669 W

characteristic: lat lon

text: plant metagenome

text: Metatranscriptome of Pinus banksiana seedlings inoculated with aeciospores of Cronartium quercuum f. sp. banksianae from Quebec, Canada - T2J29CS


characteristic: External Id

text: Host-associated | Fungi | Sclerotium | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Switzerland: Uitikon, Zurich

text: in vitro sample

text: 47.3605 N 8.4545 E

text: fungus metagenome

text: Metatranscriptome of Cenococcum geophilum sclerotia from greenhouse in Uitikon, Zurich, Switzerland - sclecontrol_Potre_R2


text: Host-associated | Plants | Roots | Unclassified | Unclassified

text: DOE Joint Genome Institute

characteristic: INSDC center name

text: live

text: Metagenome or environmental

text: Switzerland: Uitikon, Zurich

text: Pinus sylvestris

text: in vitro sample

text: 47.3605 N 8.4545 E

text: root metagenome

text: Metatranscriptome of Pinus sylvestris lateral roots inoculated with Lepidopterella palustris from greenhouse in Uitikon, Zurich, Switzerland - Myc Leppa_Pine_R2


text: DOE Joint Genome Institute

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: Canada: Quebec

text: Pinus banksiana

text: Pinus banksiana seedlings

text: 45.9369 N 76.0669 W

text: plant metagenome

text: Metatranscriptome of Pinus banksiana seedlings inoculated with aeciospores of Cronartium quercuum f. sp. banksianae from Quebec, Canada - T2J2C


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: Canada: Quebec

text: Pinus banksiana

text: Pinus banksiana seedlings

text: 45.9369 N 76.0669 W

text: plant metagenome

text: Metatranscriptome of Pinus banksiana seedlings inoculated with aeciospores of Cronartium quercuum f. sp. banksianae from Quebec, Canada - T2J29A


text: Engineered | Modeled | Simulated communities (microbial mixture) | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: Laboratory culture on Avicel cellulose substrate

text: 34.414 N 119.849 W

text: fungus metagenome

text: Metatranscriptome of Anaeromyces robustus S4 x Fibrobacter succinogenes UWB7 co-culture from UC Santa Barbara, California, United States - S4_UWB7_AV_R2


text: Host-associated | Fungi | Mycorrhiza | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Switzerland: Uitikon, Zurich

text: Pinus sylvestris

characteristic: host

text: in vitro sample

text: 47.3605 N 8.4545 E

text: root metagenome

text: Metatranscriptome of Pinus sylvestris and Cenococcum geophilum mycorrhiza from greenhouse in Uitikon, Zurich, Switzerland - Myc Cg1.58_Pine_R2


text: Host-associated | Fungi | Mycelium | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Switzerland: Uitikon, Zurich

text: in vitro sample

text: 47.3605 N 8.4545 E

text: fungus metagenome

characteristic: organism

text: Metatranscriptome of Cenococcum geophilum strain 1.22 mycelium from greenhouse in Uitikon, Zurich, Switzerland - Cg1.22_Control_R3


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Switzerland: Uitikon, Zurich

text: in vitro sample

text: 47.3605 N 8.4545 E

text: fungus metagenome

text: Metatranscriptome of Lepidopterella palustris mycelium from greenhouse in Uitikon, Zurich, Switzerland - Leppa_cntrl_R2

characteristic: title


text: Environmental | Aquatic | Marine | Fjord | Unclassified

text: DOE Joint Genome Institute

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: Norway: Bergen

text: fjord water

text: 60.2696 N 5.2187 E

text: seawater metagenome

text: Metatranscriptome of seawater microbial communities from Espelandsvegen Fjord, Bergen, Norway - Plim7_22May_surf


text: Engineered | Artificial ecosystem | Soil microcosm | Surface biofilm | Unclassified

text: DOE Joint Genome Institute

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: USA: Pennsylvania

text: Filter 'swab' of soil surface biofilm

text: 40.7997 N 77.8629 W

text: biofilm metagenome

text: Metatranscriptome of soil surface biofilm microbial communities from soil inoculated with nitrogen-fixing consortium DG1, State College, Pennsylvania, United States - STER_N_R6


text: DOE Joint Genome Institute

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: USA: Pennsylvania

text: Filter 'swab' of soil surface biofilm

text: 40.7997 N 77.8629 W

text: biofilm metagenome

text: Metatranscriptome of soil surface biofilm microbial communities from soil inoculated with nitrogen-fixing consortium DG1, State College, Pennsylvania, United States - STER_R4


text: Environmental | Aquatic | Marine | Oceanic | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

text: Canada: Western Arctic Ocean

text: Arctic ocean water

text: 80.9595 N 132.1842 W

text: seawater metagenome

text: Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CBN3_Tmax_316


text: Host-associated | Plants | Rhizoid | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: USA: Michigan

text: lab culture on sterile redi-earth

text: 42.7228 N 84.4747 W

text: moss metagenome

text: Metatranscriptome of Mortierella spp. x Physcomitrella patens Gransden 2004 co-culture from Michigan State University, East Lansing, United States - PM27(-3)


text: Environmental | Terrestrial | Plant litter | Unclassified | Unclassified

characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P3 T10


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: collection date

text: USA: California

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P2 T16


text: Engineered | Modeled | Simulated communities (microbial mixture) | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

characteristic: geo loc name

text: Laboratory culture on Avicel cellulose substrate

text: 34.414 N 119.849 W

text: fungus metagenome

text: Metatranscriptome of Anaeromyces robustus S4 x Fibrobacter succinogenes UWB7 co-culture from UC Santa Barbara, California, United States - S4_UWB7_AV_R3


text: Host-associated | Fungi | Mycorrhiza | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Switzerland: Uitikon, Zurich

text: Populus tremula

text: in vitro sample

characteristic: isolation source

text: 47.3605 N 8.4545 E

text: root metagenome

text: Metatranscriptome of Populus tremula and Cenococcum geophilum mycorrhiza from greenhouse in Uitikon, Zurich, Switzerland - Myc Cg1.58_Potre_R2


text: Host-associated | Fungi | Mycelium | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Switzerland: Uitikon, Zurich

text: in vitro sample

text: 47.3605 N 8.4545 E

characteristic: lat lon

text: fungus metagenome

text: Metatranscriptome of Glonium stellatum mycelium from greenhouse in Uitikon, Zurich, Switzerland - Glost_ control_R2


characteristic: External Id

text: Host-associated | Plants | Roots | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Switzerland: Uitikon, Zurich

text: Pinus sylvestris

text: in vitro sample

text: 47.3605 N 8.4545 E

text: root metagenome

text: Metatranscriptome of Pinus sylvestris lateral roots inoculated with Lepidopterella palustris from greenhouse in Uitikon, Zurich, Switzerland - MycLeppa_Pine_R3


text: Engineered | Artificial ecosystem | Soil microcosm | Surface biofilm | Unclassified

text: DOE Joint Genome Institute

characteristic: INSDC center name

text: live

text: Metagenome or environmental

text: USA: Pennsylvania

text: Filter 'swab' of soil surface biofilm

text: 40.7997 N 77.8629 W

text: biofilm metagenome

text: Metatranscriptome of soil surface biofilm microbial communities from soil inoculated with nitrogen-fixing consortium DG1, State College, Pennsylvania, United States - STER_N_R3


text: DOE Joint Genome Institute

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: USA: Pennsylvania

text: Filter 'swab' of soil surface biofilm

text: 40.7997 N 77.8629 W

text: biofilm metagenome

text: Metatranscriptome of soil surface biofilm microbial communities from soil inoculated with nitrogen-fixing consortium DG1, State College, Pennsylvania, United States - STER_R2


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: USA: Pennsylvania

text: Filter 'swab' of soil surface biofilm

text: 40.7997 N 77.8629 W

text: biofilm metagenome

text: Metatranscriptome of soil surface biofilm microbial communities from soil inoculated with nitrogen-fixing consortium DG1, State College, Pennsylvania, United States - STER_R6


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Pennsylvania

text: Filter 'swab' of soil surface biofilm

text: 40.7997 N 77.8629 W

text: biofilm metagenome

text: Metatranscriptome of soil surface biofilm microbial communities from soil inoculated with nitrogen-fixing consortium DG1, State College, Pennsylvania, United States - MICR_N_R5


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Pennsylvania

text: Filter 'swab' of soil surface biofilm

text: 40.7997 N 77.8629 W

text: biofilm metagenome

text: Metatranscriptome of soil surface biofilm microbial communities from soil inoculated with nitrogen-fixing consortium DG1, State College, Pennsylvania, United States - MICR_R5


text: Environmental | Aquatic | Marine | Oceanic | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Canada: Western Arctic Ocean

text: Arctic ocean water

text: 77.9995 N 150.0065 W

text: seawater metagenome

text: Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB9_Tmax_529


text: Environmental | Terrestrial | Plant litter | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P3 T17


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P3 T23


text: Host-associated | Plants | Phyllosphere | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Canada: Quebec

text: Pinus banksiana

characteristic: host

text: Pinus banksiana seedlings

text: 47.3131 N 73.5721 W

text: plant metagenome

text: Metatranscriptome of Pinus banksiana seedlings inoculated with aeciospores of Endocronartium harknessii from Quebec, Canada - T1J1C


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Canada: Quebec

text: Pinus banksiana

text: Pinus banksiana seedlings

text: 47.3131 N 73.5721 W

text: plant metagenome

characteristic: organism

text: Metatranscriptome of Pinus banksiana seedlings inoculated with aeciospores of Endocronartium harknessii from Quebec, Canada - T1J29BS


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Canada: Quebec

text: Pinus banksiana

text: Pinus banksiana seedlings

text: 47.3131 N 73.5721 W

text: plant metagenome

text: Metatranscriptome of Pinus banksiana seedlings inoculated with aeciospores of Endocronartium harknessii from Quebec, Canada - T1J29CS

characteristic: title


text: DOE Joint Genome Institute

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: Canada: Quebec

text: Pinus banksiana

text: Pinus banksiana seedlings

text: 45.9369 N 76.0669 W

text: plant metagenome

text: Metatranscriptome of Pinus banksiana seedlings inoculated with aeciospores of Cronartium quercuum f. sp. banksianae from Quebec, Canada - T2J1B


text: DOE Joint Genome Institute

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: Canada: Quebec

text: Pinus banksiana

text: Pinus banksiana seedlings

text: 45.9369 N 76.0669 W

text: plant metagenome

text: Metatranscriptome of Pinus banksiana seedlings inoculated with aeciospores of Cronartium quercuum f. sp. banksianae from Quebec, Canada - T2J90CS


text: Engineered | Modeled | Simulated communities (microbial mixture) | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: USA: California

text: Laboratory culture on switchgrass substrate

text: 34.414 N 119.849 W

text: fungus metagenome

text: Metatranscriptome of Anaeromyces robustus S4 x Fibrobacter succinogenes UWB7 co-culture from UC Santa Barbara, California, United States - S4_UWB7_SG_R1


text: Host-associated | Fungi | Mycorrhiza | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

text: Switzerland: Uitikon, Zurich

text: Pinus sylvestris

text: in vitro sample

text: 47.3605 N 8.4545 E

text: root metagenome

text: Metatranscriptome of Pinus sylvestris and Cenococcum geophilum strain 1.96 mycorrhiza from greenhouse in Uitikon, Zurich, Switzerland - Myc Cg1.96_Pine_R1


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Switzerland: Uitikon, Zurich

text: Pinus sylvestris

text: in vitro sample

text: 47.3605 N 8.4545 E

text: root metagenome

text: Metatranscriptome of Pinus sylvestris and Cenococcum geophilum strain 1.96 mycorrhiza from greenhouse in Uitikon, Zurich, Switzerland - Myc Cg1.96_Pine_R3


text: Environmental | Aquatic | Marine | Coastal | Unclassified

characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Alaska

text: Permafrost cryopeg brine

text: 71.2944 N 156.7153 W

text: brine metagenome

text: Metatranscriptome of cryopeg brine viral communities from Beaufort Sea near Barrow, Alaska, United States - CB4 2018


text: Engineered | Artificial ecosystem | Soil microcosm | Surface biofilm | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: collection date

text: USA: Pennsylvania

text: Filter 'swab' of soil surface biofilm

text: 40.7997 N 77.8629 W

text: biofilm metagenome

text: Metatranscriptome of soil surface biofilm microbial communities from soil inoculated with nitrogen-fixing consortium DG1, State College, Pennsylvania, United States - MICR_R3


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Pennsylvania

characteristic: geo loc name

text: Filter 'swab' of soil surface biofilm

text: 40.7997 N 77.8629 W

text: biofilm metagenome

text: Metatranscriptome of soil surface biofilm microbial communities from soil inoculated with nitrogen-fixing consortium DG1, State College, Pennsylvania, United States - MICR_R6


text: Host-associated | Plants | Rhizoid | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Michigan

text: lab culture on sterile redi-earth

characteristic: isolation source

text: 42.7228 N 84.4747 W

text: moss metagenome

text: Metatranscriptome of Physcomitrella patens Gransden 2004 from Michigan State University, East Lansing, United States - Ppc4


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Michigan

text: lab culture on sterile redi-earth

text: 42.7228 N 84.4747 W

characteristic: lat lon

text: moss metagenome

text: Metatranscriptome of Mortierella spp. x Physcomitrella patens Gransden 2004 co-culture from Michigan State University, East Lansing, United States - PM27(-4)


characteristic: External Id

text: Environmental | Terrestrial | Plant litter | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P2 T7


text: DOE Joint Genome Institute

characteristic: INSDC center name

text: live

text: Metagenome or environmental

text: USA: California

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P3 T25


text: DOE Joint Genome Institute

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: USA: California

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P1 T29


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: USA: California

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P3 T31


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P2 T33


text: Environmental | Aquatic | Marine | Fjord | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Norway: Bergen

text: fjord water

text: 60.2696 N 5.2187 E

text: seawater metagenome

text: Metatranscriptome of seawater microbial communities from Espelandsvegen Fjord, Bergen, Norway - Red4_28May_surf


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Norway: Bergen

text: fjord water

text: 60.2696 N 5.2187 E

text: seawater metagenome

text: Metatranscriptome of seawater microbial communities from Espelandsvegen Fjord, Bergen, Norway - Red4_26May_deep


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Norway: Bergen

text: fjord water

text: 60.2696 N 5.2187 E

text: seawater metagenome

text: Metatranscriptome of seawater microbial communities from Espelandsvegen Fjord, Bergen, Norway - Plim7_28May_surf


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Norway: Bergen

text: fjord water

text: 60.2696 N 5.2187 E

text: seawater metagenome

text: Metatranscriptome of seawater microbial communities from Espelandsvegen Fjord, Bergen, Norway - Shad10_24May_surf


text: Engineered | Artificial ecosystem | Soil microcosm | Surface biofilm | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Pennsylvania

text: Filter 'swab' of soil surface biofilm

text: 40.7997 N 77.8629 W

text: biofilm metagenome

text: Metatranscriptome of soil surface biofilm microbial communities from soil inoculated with nitrogen-fixing consortium DG1, State College, Pennsylvania, United States - MICR_N_R4


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Pennsylvania

text: Filter 'swab' of soil surface biofilm

text: 40.7997 N 77.8629 W

text: biofilm metagenome

text: Metatranscriptome of soil surface biofilm microbial communities from soil inoculated with nitrogen-fixing consortium DG1, State College, Pennsylvania, United States - MICR_R4


text: Host-associated | Plants | Phyllosphere | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Canada: Quebec

text: Pinus banksiana

characteristic: host

text: Pinus banksiana seedlings

text: 47.3131 N 73.5721 W

text: plant metagenome

text: Metatranscriptome of Pinus banksiana seedlings inoculated with aeciospores of Endocronartium harknessii from Quebec, Canada - T1J90C


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Canada: Quebec

text: Pinus banksiana

text: Pinus banksiana seedlings

text: 47.3131 N 73.5721 W

text: plant metagenome

characteristic: organism

text: Metatranscriptome of Pinus banksiana seedlings inoculated with aeciospores of Endocronartium harknessii from Quebec, Canada - T1J1B


text: Host-associated | Fungi | Mycelium | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Switzerland: Uitikon, Zurich

text: in vitro sample

text: 47.3605 N 8.4545 E

text: fungus metagenome

text: Metatranscriptome of Cenococcum geophilum strain 1.96 mycelium from greenhouse in Uitikon, Zurich, Switzerland - Cg1.96_Control_R2

characteristic: title


text: Environmental | Aquatic | Marine | Oceanic | Unclassified

text: DOE Joint Genome Institute

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: Canada: Western Arctic Ocean

text: Arctic ocean water

text: 75.0007 N 150.0027 W

text: seawater metagenome

text: Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB4_Tmax_934


text: Environmental | Terrestrial | Plant litter | Unclassified | Unclassified

text: DOE Joint Genome Institute

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: USA: California

text: Grass litter

text: 33.7417 N 117.7042 W

text: leaf litter metagenome

text: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P3 T5


text: DOE Joint Genome Institute

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: Switzerland: Uitikon, Zurich

text: in vitro sample

text: 47.3605 N 8.4545 E

text: fungus metagenome

text: Metatranscriptome of Cenococcum geophilum strain 1.96 mycelium from greenhouse in Uitikon, Zurich, Switzerland - Cg1.96_Control_R1


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

text: Switzerland: Uitikon, Zurich

text: in vitro sample

text: 47.3605 N 8.4545 E

text: fungus metagenome

text: Metatranscriptome of Lepidopterella palustris mycelium from greenhouse in Uitikon, Zurich, Switzerland - Leppa_cntrl_R1


text: Host-associated | Plants | Roots | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Switzerland: Uitikon, Zurich

text: in vitro sample

text: 47.3605 N 8.4545 E

text: root metagenome

text: Metatranscriptome of Populus tremula lateral roots from greenhouse in Uitikon, Zurich, Switzerland - Potre_control_R2


text: Host-associated | Plants | Roots | Rhizosphere | Unclassified

characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: Alabama

text: Sporobolus alterniflorus

text: rhizosphere of the salt marsh grasses

text: 30.2619 N 88.2383 W

text: rhizosphere metagenome

text: Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: collection date

text: Switzerland: Uitikon, Zurich

text: in vitro sample

text: 47.3605 N 8.4545 E

text: fungus metagenome

text: Metatranscriptome of Cenococcum geophilum mycelium from greenhouse in Uitikon, Zurich, Switzerland - CntlCg_Potre_R3


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Switzerland: Uitikon, Zurich

characteristic: geo loc name

text: in vitro sample

text: 47.3605 N 8.4545 E

text: fungus metagenome

text: Metatranscriptome of Cenococcum geophilum mycelium from greenhouse in Uitikon, Zurich, Switzerland - CntlCg_Potre_R2


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Switzerland: Uitikon, Zurich

text: in vitro sample

characteristic: isolation source

text: 47.3605 N 8.4545 E

text: fungus metagenome

text: Metatranscriptome of Cenococcum geophilum strain 1.22 mycelium from greenhouse in Uitikon, Zurich, Switzerland - Cg1.22_Control_R1


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Switzerland: Uitikon, Zurich

text: Pinus sylvestris

text: in vitro sample

text: 47.3605 N 8.4545 E

characteristic: lat lon

text: root metagenome

text: Metatranscriptome of Pinus sylvestris lateral roots inoculated with Glonium stellatum from greenhouse in Uitikon, Zurich, Switzerland - Myc_Glost_Pine_R2


characteristic: External Id

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Switzerland: Uitikon, Zurich

text: in vitro sample

text: 47.3605 N 8.4545 E

text: root metagenome

text: Metatranscriptome of Pinus sylvestris lateral roots from greenhouse in Uitikon, Zurich, Switzerland - Pinus_Control_R2


text: Host-associated | Fungi | Mycelium | Unclassified | Unclassified

text: DOE Joint Genome Institute

characteristic: INSDC center name

text: live

text: Metagenome or environmental

text: Switzerland: Uitikon, Zurich

text: in vitro sample

text: 47.3605 N 8.4545 E

text: fungus metagenome

text: Metatranscriptome of Cenococcum geophilum strain 1.22 mycelium from greenhouse in Uitikon, Zurich, Switzerland - Cg1.22_Control_R2


text: DOE Joint Genome Institute

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: Switzerland: Uitikon, Zurich

text: Pinus sylvestris

text: in vitro sample

text: 47.3605 N 8.4545 E

text: root metagenome

text: Metatranscriptome of Pinus sylvestris lateral roots inoculated with Metatranscriptome of Cenococcum geophilum strain 1.22 from greenhouse in Uitikon, Zurich, Switzerland - Myc Cg1.22_Pine_R3


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: Switzerland: Uitikon, Zurich

text: in vitro sample

text: 47.3605 N 8.4545 E

text: fungus metagenome

text: Metatranscriptome of Cenococcum geophilum strain 1.96 mycelium from greenhouse in Uitikon, Zurich, Switzerland - Cg1.96_Control_R3


text: Host-associated | Fungi | Mycorrhiza | Unclassified | Unclassified

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Switzerland: Uitikon, Zurich

text: Pinus sylvestris

characteristic: host

text: in vitro sample

text: 47.3605 N 8.4545 E

text: root metagenome

text: Metatranscriptome of Pinus sylvestris and Cenococcum geophilum strain 1.96 mycorrhiza from greenhouse in Uitikon, Zurich, Switzerland - Myc Cg1.96_Pine_R2


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Switzerland: Uitikon, Zurich

text: Pinus sylvestris

text: in vitro sample

text: 47.3605 N 8.4545 E

text: root metagenome

characteristic: organism

text: Metatranscriptome of Pinus sylvestris lateral roots inoculated with Glonium stellatum from greenhouse in Uitikon, Zurich, Switzerland - Myc_Glost_Pine_R3


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Switzerland: Uitikon, Zurich

text: Pinus sylvestris

text: in vitro sample

text: 47.3605 N 8.4545 E

text: root metagenome

text: Metatranscriptome of Pinus sylvestris lateral roots inoculated with Glonium stellatum from greenhouse in Uitikon, Zurich, Switzerland - Myc_Glost_Pine_R1

characteristic: title


text: Host-associated | Plants | Roots | Unclassified | Unclassified

text: DOE Joint Genome Institute

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: Switzerland: Uitikon, Zurich

text: in vitro sample

text: 47.3605 N 8.4545 E

text: root metagenome

text: Metatranscriptome of Populus tremula lateral roots from greenhouse in Uitikon, Zurich, Switzerland - Potre_control_R1


text: Host-associated | Fungi | Sclerotium | Unclassified | Unclassified

text: DOE Joint Genome Institute

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: Switzerland: Uitikon, Zurich

text: in vitro sample

text: 47.3605 N 8.4545 E

text: fungus metagenome

text: Metatranscriptome of Cenococcum geophilum sclerotia from greenhouse in Uitikon, Zurich, Switzerland - scle_myc_Potre_R1


text: DOE Joint Genome Institute

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: Switzerland: Uitikon, Zurich

text: in vitro sample

text: 47.3605 N 8.4545 E

text: fungus metagenome

text: Metatranscriptome of Cenococcum geophilum mycelium from greenhouse in Uitikon, Zurich, Switzerland - ControlCg_Potre_R1


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

text: Switzerland: Uitikon, Zurich

text: in vitro sample

text: 47.3605 N 8.4545 E

text: root metagenome

text: Metatranscriptome of Pinus sylvestris lateral roots from greenhouse in Uitikon, Zurich, Switzerland - Pinus_Control_R3