Massilia plicata DSM 17505T

text: University of Tuebingen

text: live

text: Microbe, viral or environmental

characteristic: collection date

characteristic: culture collection

text: China: Nanjing, Jiangsu province

characteristic: geo loc name

text: heavy-metal-polluted farm soil

text: Pseudoduganella plicata

text: cell culture

text: DSM 17505

text: Massilia plicata DSM 17505

text: type strain of Massilia plicata

characteristic: type material


status: PUBLIC

characteristic: External Id

text: Scripps Institution of Oceanography

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIMAG.sediment

characteristic: NCBI submission model

characteristic: NCBI submission package

tag: attribute

characteristic: bin number

text: 0-1 cm

characteristic: depth

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: description

text: - 9177 m

characteristic: elev

text: Marine sediment

text: Surficial sediment

text: Deep marine sediment

characteristic: environmental sample

text: Pacific Ocean

characteristic: isolate

text: Hadal surficial sediment

characteristic: isolation source

text: 32.85 S 177.65 W

characteristic: lat lon

text: marine sediment metagenome

characteristic: metagenome source

characteristic: metagenomic

text: This BioSample is a metagenomic assembly obtained from the marine sediment metagenome BioSample: SAMN11095934

characteristic: note

text: Planctomycetota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample-type

characteristic: title


characteristic: External Id

text: Scripps Institution of Oceanography

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIMAG.sediment

characteristic: collection date

text: 0-1 cm

text: Keywords: GSC:MIxS;MIMAG:6.0

text: - 8081 m

text: Marine sediment

text: Surficial sediment

text: Deep marine sediment

text: Pacific Ocean

characteristic: geo loc name

text: Hadal surficial sediment

text: 34.34 S 178.18 W

text: marine sediment metagenome

text: This BioSample is a metagenomic assembly obtained from the marine sediment metagenome BioSample: SAMN11095933

text: Planctomycetota bacterium

text: metagenomic assembly


Rhodococcus equi F6

text: Tianjin University of Science and Technology

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: whole genome sequence of Rhodococcus equi F6

characteristic: description

text: China

text: f

text: soil

text: Prescottella equi

text: whole organism

characteristic: sample type

characteristic: strain

text: Microbe sample from Rhodococcus equi F6


Paraburkholderia LD6

text: Kyonggi University, Suwon, South Korea

text: live

text: Microbe, viral or environmental

text: Ngoc Hoang Trinh, Department of Life Science, Kyonggi University

characteristic: collected by

text: South Korea

text: forest soil

characteristic: isolation source

text: 37.30681 N 127.0349 E

characteristic: lat lon

text: Paraburkholderia flava

characteristic: organism

text: soil sample

characteristic: temp

text: Microbe sample from Paraburkholderia flava

text: type material of Paraburkholderia flava

characteristic: type material


characteristic: External Id

text: the Key Laboratory of Developmental Genes and Human Disease, Institute of Life Sciences, Southeast University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: murine embryonic stem cells

characteristic: cell type

characteristic: chip antibody

text: Mus musculus

text: murine embryonic stem cells

text: C57BL/6 (female) x 129/S (male)

text: ChIP-seq of BRCA2 in ZFP281 shRNA mESC

characteristic: title


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: murine embryonic stem cells

text: Mus musculus

text: murine embryonic stem cells

text: C57BL/6 (female) x 129/S (male)

text: ChIP-seq of BRCA2 in Non T shRNA mESC


text: live

text: Generic

text: murine embryonic stem cells

text: Mus musculus

text: murine embryonic stem cells

text: C57BL/6 (female) x 129/S (male)

characteristic: strain

text: ChIP-seq of BRCA2 in EED KO mESC


text: live

text: Generic

text: murine embryonic stem cells

text: Mus musculus

text: murine embryonic stem cells

text: C57BL/6 (female) x 129/S (male)

text: EED KO mESC Input


text: Sun Yat-sen University

text: live

text: Microbe, viral or environmental

text: State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University

characteristic: biomaterial provider

text: Lihong Qiu;Zenghong Gao

characteristic: collected by

characteristic: collection date

text: 20 cm

characteristic: depth

text: Paraburkholderia sp. 7MH5, isolated from subtropical forest soil

characteristic: description

text: China:Guangdong Province

characteristic: geo loc name

text: Zenghong Gao

characteristic: identified by

text: forest soil

characteristic: isolation source

text: 23.17 N 112.53 E

characteristic: lat lon

text: Paraburkholderia pallida

text: cell culture

characteristic: sample type

text: Microbe sample from Paraburkholderia sp. 7MH5

text: type material of Paraburkholderia pallida


characteristic: External Id

text: Genetic and phenotypic plasticity of cancer team, IRCM

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: cell line

text: Breast cancer cell line

characteristic: cell type

text: down regulation E4F1

characteristic: genotype/variation

text: Homo sapiens

characteristic: organism

text: SUM159 cells

text: Triple negative breast cancer

characteristic: subtype

text: mammary gland; breast

characteristic: tissue

characteristic: title

characteristic: transfection

text: Gemcitabine treated

characteristic: treatment

text: Primary tumor

characteristic: tumor source


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Breast cancer cell line

text: Homo sapiens

text: SUM159 cells

text: Triple negative breast cancer

text: mammary gland; breast

text: shCTRL

text: Gemcitabine treated

text: Primary tumor


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Breast cancer cell line

text: Homo sapiens

text: SUM159 cells

text: Triple negative breast cancer

text: mammary gland; breast

text: shCTRL

text: Untreated

text: Primary tumor


characteristic: INSDC last update

text: live

text: Generic

characteristic: cell line

text: Breast cancer cell line

characteristic: cell type

text: down regulation E4F1

text: Homo sapiens

text: SUM159 cells

text: Triple negative breast cancer

text: mammary gland; breast

text: Untreated

text: Primary tumor


text: live

text: Generic

text: Triple negative breast cancer cell type

text: Affinity-purified polyclonal Rabbit

characteristic: chip antibody

text: Homo sapiens

characteristic: organism

text: primary mammary gland; breast tumor

characteristic: tissue source


text: live

text: Generic

text: Triple negative breast cancer cell type

text: Homo sapiens

text: primary mammary gland; breast tumor

characteristic: title


text: live

text: Generic

text: Triple negative breast cancer cell type

text: Affinity-purified polyclonal Rabbit

text: Homo sapiens

text: primary mammary gland; breast tumor

text: 140nM of Gemcitabine

characteristic: treatment


text: live

text: Generic

text: Triple negative breast cancer cell type

text: Homo sapiens

text: primary mammary gland; breast tumor

text: 140nM of Gemcitabine


text: J.A. Steen, F.M. Kirby Center for Neurobiology, Boston Children's Hospital & Harvard Medical School

text: live

text: Generic

characteristic: developmental stage

text: Homozygote (SMA)

characteristic: genotype

characteristic: mouse strain

text: Mus musculus

text: P10 spinal cord

text: Spinal cord

characteristic: tissue


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Homozygote (SMA)

text: Mus musculus

text: P6 spinal cord

text: Spinal cord


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: SRA accession

text: Homozygote (SMA)

text: Mus musculus

text: P2 spinal cord

text: Spinal cord


characteristic: INSDC last update

text: live

text: Generic

text: Heterozygote (control)

text: Mus musculus

text: P10 spinal cord

text: Spinal cord


text: live

text: Generic

text: Heterozygote (control)

text: Mus musculus

characteristic: organism

text: P6 spinal cord

text: Spinal cord


text: live

text: Generic

text: Heterozygote (control)

text: Mus musculus

text: P2 spinal cord

text: Spinal cord


text: Shanghai Jiao Tong University

text: live

text: Generic

text: Mus musculus

text: Female germ line stem cells

text: C89 treated group


text: Shanghai Jiao Tong University

text: live

text: Generic

text: Mus musculus

text: Female germ line stem cells

text: control group


text: Biochemistry, University of Cambridge

text: live

text: Generic

text: Mus musculus

text: liver

text: 7 days after injury without MycER activation


text: Biochemistry, University of Cambridge

text: live

text: Generic

text: Mus musculus

text: liver

text: 3 days after injury without MycER activation


text: Biochemistry, University of Cambridge

text: live

text: Generic

text: Mus musculus

text: liver

text: 2 days after injury without MycER activation


text: Biochemistry, University of Cambridge

text: live

text: Generic

text: Mus musculus

text: liver

text: 1 days after injury without MycER activation


text: Biochemistry, University of Cambridge

text: live

text: Generic

text: Mus musculus

text: liver

text: 12 days after injury with MycER activation


text: Biochemistry, University of Cambridge

text: live

text: Generic

text: Mus musculus

text: liver

text: 12 days after injury without MycER activation


text: veterinary clinical/research| companion animal

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

text: live

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: MO

characteristic: collected by

characteristic: collection date

text: Escherichia

characteristic: genus

text: USA:LA

characteristic: geo loc name

text: feces (Canis lupus familaris)

characteristic: isolation source

text: canis lupus familiaris:NCBITAXON_9615, feces:UBERON_0001988

characteristic: ontological term

text: Escherichia coli

text: animal

characteristic: source type

text: coli

characteristic: species

characteristic: strain

text: Pathogen: environmental/food/other sample from Escherichia coli


characteristic: External Id

text: veterinary clinical/research| other animal

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: NY-Vet-LIRN

text: Listeria

text: USA:NY

text: brain (Capra aegagrus hircus)

text: brain:UBERON_0000955, capra aegagrus:NCBITAXON_9923, capra hircus:NCBITAXON_9925

text: Listeria monocytogenes

text: animal

text: monocytogenes

text: Pathogen: environmental/food/other sample from Listeria monocytogenes

characteristic: title


characteristic: IFSAC+ Category

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: NY-Vet-LIRN

text: Listeria

text: USA:NY

text: cerebellum (Capra aegagrus hircus)

text: capra aegagrus:NCBITAXON_9923, capra hircus:NCBITAXON_9925, cerebellum:UBERON_0002037

text: Listeria monocytogenes

characteristic: organism

text: animal

text: monocytogenes


text: live

text: Pathogen.env

text: environmental/food/other

text: NY-Vet-LIRN

characteristic: collected by

characteristic: collection date

text: Listeria

characteristic: genus

text: USA:NY

characteristic: geo loc name

text: brain stem (Capra aegagrus hircus)

characteristic: isolation source

text: brainstem:UBERON_0002298, capra aegagrus:NCBITAXON_9923, capra hircus:NCBITAXON_9925

characteristic: ontological term

text: Listeria monocytogenes

text: animal

characteristic: source type

text: monocytogenes


characteristic: External Id

text: veterinary clinical/research| cow

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: NY-Vet-LIRN

text: Listeria

text: USA:NJ

text: conjunctiva (Bos taurus)

text: bos taurus:NCBITAXON_9913, conjunctiva:UBERON_0001811

text: Listeria monocytogenes

text: animal

text: monocytogenes

characteristic: species

characteristic: strain


characteristic: IFSAC+ Category

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: NY-Vet-LIRN

text: Listeria

text: USA:NY

text: brain (Ovis aries)

text: brain:UBERON_0000955, ovis aries:NCBITAXON_9940

text: Listeria monocytogenes

text: animal

text: monocytogenes

characteristic: title


text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: NY-Vet-LIRN

characteristic: collected by

characteristic: collection date

text: Listeria

characteristic: genus

text: USA:VT

characteristic: geo loc name

text: brain stem (Capra aegagrus hircus)

characteristic: isolation source

text: Listeria monocytogenes

characteristic: organism

text: animal

text: monocytogenes


characteristic: External Id

text: veterinary clinical/research| cow

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: NY-Vet-LIRN

text: Listeria

text: USA:VT

text: conjunctiva (Bos taurus)

characteristic: ontological term

text: Listeria monocytogenes

text: animal

characteristic: source type

text: monocytogenes


text: dairy

characteristic: IFSAC+ Category

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: NCBI submission package

text: environmental/food/other

text: NY-Vet-LIRN

text: Listeria

text: USA:NY

text: milk (Bos taurus)

text: bos taurus:NCBITAXON_9913|cow milk (liquid):FOODON_03302116

text: Listeria monocytogenes

text: food

text: monocytogenes

characteristic: species

characteristic: strain


text: multi-ingredient

characteristic: IFSAC Category

text: live

text: Pathogen.env

characteristic: PublicAccession

text: FLAG

characteristic: collected by

characteristic: collection date

text: Listeria

characteristic: genus

text: USA:FL

text: cuban sandwich

text: cuban:ANCESTRO_0405, sandwich:FOODON_03301906

text: Listeria monocytogenes

text: food

text: monocytogenes

characteristic: title


characteristic: External Id

text: veterinary clinical/research| cow

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: ProjectAccession

characteristic: SRA accession

text: environmental/food/other

text: NY-Vet-LIRN

text: Listeria

text: USA:NY

characteristic: geo loc name

text: brain (Bos taurus)

characteristic: isolation source

text: bos taurus:NCBITAXON_9913, brain:UBERON_0000955

text: Listeria monocytogenes

characteristic: organism

text: animal

text: monocytogenes


text: multi-ingredient, dairy, pork

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: FLAG

text: Listeria

text: USA:FL

text: ham cheese sandwich

text: ham sandwich:FOODON_03307807, cheese sandwich:FOODON_03312036

characteristic: ontological term

text: Listeria monocytogenes

text: food

characteristic: source type

text: monocytogenes


text: multi-ingredient

characteristic: IFSAC Category

text: live

text: Pathogen.env

characteristic: PublicAccession

text: FLAG

characteristic: collected by

characteristic: collection date

text: Listeria

characteristic: genus

text: USA:FL

text: sandwich

text: Listeria monocytogenes

text: food

text: monocytogenes

characteristic: species

characteristic: strain


characteristic: External Id

text: multi-ingredient, beef

characteristic: INSDC center name

text: live

text: Pathogen.env

text: FLAG

text: Listeria

text: USA:FL

characteristic: geo loc name

text: roast beef sandwich

text: roast beef:FOODON_00002734, sandwich:FOODON_03301906

text: Listeria monocytogenes

text: food

text: monocytogenes

characteristic: title


text: multi-ingredient, beef, pork

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: FLAG

text: Listeria

text: USA:FL

text: frankfurter

characteristic: isolation source

text: Listeria monocytogenes

characteristic: organism

text: food

text: monocytogenes


characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

characteristic: SRA accession

text: environmental/food/other

text: NY-Vet-LIRN

text: Listeria

text: USA:PA

text: lung (Capra aegagrus hircus)

text: capra aegagrus:NCBITAXON_9923, capra hircus:NCBITAXON_9925, lung:UBERON_0002048

characteristic: ontological term

text: Listeria monocytogenes

text: animal

text: monocytogenes


text: multi-ingredient, fish

characteristic: IFSAC Category

text: live

text: Pathogen.env

characteristic: PublicAccession

text: FLAG

characteristic: collected by

characteristic: collection date

text: Listeria

characteristic: genus

text: USA:FL

text: tuna fish sandwich

text: tuna:FOODON_03411269, sandwich:FOODON_03301906

text: Listeria monocytogenes

text: food

characteristic: source type

text: monocytogenes

characteristic: species

characteristic: strain


characteristic: External Id

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: NY-Vet-LIRN

text: Listeria

text: USA:NY

characteristic: geo loc name

text: lung (Vicugna pacos)

characteristic: isolation source

text: lung:UBERON_0002048, vicugna:NCBITAXON_30539

text: Listeria monocytogenes

characteristic: organism

text: animal

text: monocytogenes

characteristic: title


text: veterinary clinical/research| companion animal

characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

characteristic: SRA accession

text: environmental/food/other

text: MO

text: Clostridium

text: USA:LA

text: feces (Canis lupus familaris)

text: canis lupus familiaris:NCBITAXON_9615, feces:UBERON_0001988

characteristic: ontological term

text: Clostridium perfringens

text: animal

text: perfringens

text: 800-299 FEC-1B

text: Pathogen: environmental/food/other sample from Clostridium perfringens


text: veterinary clinical/research| other animal

text: live

text: Pathogen.env

characteristic: PublicAccession

text: environmental/food/other

text: NY-Vet-LIRN

characteristic: collected by

characteristic: collection date

text: Listeria

characteristic: genus

text: USA:NY

text: abomasum content (Capra aegagrus hircus)

text: abomasum:UBERON_0007358, capra aegagrus:NCBITAXON_9923, capra hircus:NCBITAXON_9925, composition:PATO_0000025, goat:FOODON_03411328

text: Listeria monocytogenes

text: animal

characteristic: source type

text: monocytogenes

characteristic: species

characteristic: strain

text: Pathogen: environmental/food/other sample from Listeria monocytogenes


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: NY-Vet-LIRN

text: Listeria

text: USA:NY

characteristic: geo loc name

text: brain stem (Capra aegagrus hircus)

characteristic: isolation source

text: brainstem:UBERON_0002298, capra aegagrus:NCBITAXON_9923, capra hircus:NCBITAXON_9925

text: Listeria monocytogenes

characteristic: organism

text: animal

text: monocytogenes


text: cow

characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

text: environmental/food/other

text: NY-Vet-LIRN

text: Listeria

text: USA:NY

text: Mammary (Bos taurus)

text: bos taurus:NCBITAXON_9913

text: Listeria monocytogenes

text: animal

text: monocytogenes

characteristic: title


text: veterinary clinical/research| cow

text: live

text: Pathogen.env

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: NY-Vet-LIRN

characteristic: collected by

characteristic: collection date

text: Listeria

characteristic: genus

text: USA:VT

text: eye (Bos taurus)

text: bos taurus:NCBITAXON_9913, eye:UBERON_0000970

characteristic: ontological term

text: Listeria monocytogenes

text: animal

characteristic: source type

text: monocytogenes


characteristic: External Id

text: veterinary clinical/research| cow

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: NY-Vet-LIRN

text: Listeria

text: USA:VT

characteristic: geo loc name

text: cerebral spinal fluid (Bos taurus)

text: bos taurus:NCBITAXON_9913, cerebrospinal fluid:UBERON_0001359

text: Listeria monocytogenes

text: animal

text: monocytogenes

characteristic: species

characteristic: strain


text: veterinary clinical/research| cow

characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: NY-Vet-LIRN

text: Listeria

text: USA:NY

text: brain stem (Bos taurus)

characteristic: isolation source

text: bos taurus:NCBITAXON_9913, brainstem:UBERON_0002298

text: Listeria monocytogenes

characteristic: organism

text: animal

text: monocytogenes


text: dairy

text: live

text: Pathogen.env

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: NY-Vet-LIRN

characteristic: collected by

characteristic: collection date

text: Listeria

characteristic: genus

text: USA:NY

text: milk (Bos taurus)

text: bos taurus:NCBITAXON_9913|cow milk (liquid):FOODON_03302116

text: Listeria monocytogenes

text: food

text: monocytogenes

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: ProjectAccession

text: environmental/food/other

text: NY-Vet-LIRN

text: Listeria

text: USA:NY

text: lung (Capra aegagrus hircus)

characteristic: ontological term

text: Listeria monocytogenes

text: animal

characteristic: source type

text: monocytogenes


text: veterinary clinical/research| cow

characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: environmental/food/other

text: NY-Vet-LIRN

text: Listeria

text: USA:NY

characteristic: geo loc name

text: brain (Bos taurus)

text: bos taurus:NCBITAXON_9913, brain:UBERON_0000955

text: Listeria monocytogenes

text: animal

text: monocytogenes

characteristic: species

characteristic: strain


text: veterinary clinical/research| cow

text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: NY-Vet-LIRN

characteristic: collected by

characteristic: collection date

text: Listeria

text: USA:NY

text: vagina (Bos taurus)

characteristic: isolation source

text: bos taurus:NCBITAXON_9913, vagina:UBERON_0000996

text: Listeria monocytogenes

characteristic: organism

text: animal

text: monocytogenes


characteristic: External Id

text: multi-ingredient, fish

characteristic: IFSAC Category

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: FLAG

text: Listeria

characteristic: genus

text: USA:FL

text: tuna salad

text: tuna salad:FOODON_03308735

text: Listeria monocytogenes

text: food

text: monocytogenes

characteristic: title


text: cow

characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: ProjectAccession

text: environmental/food/other

text: NY-Vet-LIRN

text: Listeria

text: USA:NY

characteristic: geo loc name

text: liver (bos taurus)

text: bos taurus:NCBITAXON_9913, liver:UBERON_0002107

characteristic: ontological term

text: Listeria monocytogenes

text: animal

characteristic: source type

text: monocytogenes


text: fish

text: FDA Center for Food Safety and Applied Nutrition

text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: PublicAccession

text: FLAG

characteristic: collected by

characteristic: collection date

text: Listeria

text: USA:FL

text: smoked chub

characteristic: isolation source

text: food smoked:FOODON_03310311, lake herring:FOODON_03411118

text: Listeria monocytogenes

text: food

text: monocytogenes

characteristic: species

characteristic: strain


characteristic: External Id

text: multi-ingredient, eggs

characteristic: IFSAC Category

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.env

text: FLAG

text: Listeria

characteristic: genus

text: USA:FL

text: egg salad sandwich

text: egg salad sandwich:FOODON_03307770

text: Listeria monocytogenes

characteristic: organism

text: food

text: monocytogenes


text: multi-ingredient, pork

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

text: FLAG

text: Listeria

text: USA:FL

characteristic: geo loc name

text: ham salad sandwich

text: ham salad:FOODON_03306091, ham sandwich:FOODON_03307807

text: Listeria monocytogenes

text: food

text: monocytogenes

characteristic: title


text: cow

characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: ProjectAccession

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: NY-Vet-LIRN

text: Listeria

text: USA:NY

text: Lung (Bos taurus)

text: bos taurus:NCBITAXON_9913, lung:UBERON_0002048

characteristic: ontological term

text: Listeria monocytogenes

text: animal

characteristic: source type

text: monocytogenes


Shiraia bambusicola

characteristic: External Id

text: Guizhou institute of biotechnology

characteristic: INSDC center name

text: live

text: MIGS.eu

text: MIGS/MIMS/MIMARKS.plant-associated

text: 1000 m

characteristic: altitude

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: not applicable'

text: China

text: bamboo

characteristic: host

text: Low lying areas that are dark ,damp and where direct sunlight is not available

text: small branches

text: 30 N 115 E

text: Shiraia bambusicola

characteristic: strain

text: Shiraia bambusicola GZAAS2.1243 Genome


text: Yonsei University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: age

text: HCV patient

characteristic: disease state

text: Homo sapiens

characteristic: organism

text: female

characteristic: sex

text: Liver tissue from HCV patient

text: liver

characteristic: tissue


text: Yonsei University

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: HCV patient

text: Homo sapiens

text: male

text: Liver tissue from HCV patient

text: liver

characteristic: title


characteristic: External Id

text: Yonsei University

characteristic: INSDC center name

text: live

text: Generic

text: normal

text: Homo sapiens

text: male

text: Normal liver tissue

text: liver


text: Yonsei University

text: live

text: Generic

characteristic: cell line

text: Hepatocellular carcinoma cell line

characteristic: cell type

text: Homo sapiens

text: Total small RNA from Huh7 cells


M.hominis 4235 complete genome

text: USC/EA 3671 Mycoplasma and Chlamydia infections in humans

characteristic: INSDC first public

text: live

text: Pathogen.cl

text: Bordeaux University Hospital

characteristic: collected by

characteristic: collection date

text: MLVA type 10

characteristic: genotype

text: France

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: salpingitis

characteristic: host disease

text: female

characteristic: host sex

text: peritoneal fluid

text: peritoneal fluid

characteristic: isolation source

text: 44.83 N 0.57 W

characteristic: lat lon

text: Metamycoplasma hominis

characteristic: strain

text: Pathogen: clinical or host-associated sample from Metamycoplasma hominis


Sooke River water

text: University of Alberta

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

characteristic: NCBI submission model

text: MIMARKS.survey

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: depth

text: Keywords: GSC:MIxS;MIMARKS:6.0

characteristic: description

text: freshwater river biome

text: small river biome

text: river water

text: Canada:Sooke River

text: 48.44 N 123.719 W

text: freshwater metagenome

characteristic: organism

text: Sooke River water


Cowichan River water

characteristic: External Id

text: University of Alberta

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIMARKS.survey

characteristic: collection date

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: freshwater river biome

text: small river biome

text: river water

text: Canada:Cowichan River

text: 48.78 N 123.896 W

text: freshwater metagenome

text: Cowichan River water

characteristic: title


Nanaimo River water

text: University of Alberta

text: live

text: MIMARKS.survey

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: freshwater river biome

text: small river biome

text: river water

text: Canada:Nanaimo River

characteristic: geo loc name

text: 49.07 N 123.934 W

text: freshwater metagenome

text: Nanaimo River water


Sooke River biofilm

text: University of Alberta

text: live

text: MIGS/MIMS/MIMARKS.microbial

text: MIMARKS.survey

text: Keywords: GSC:MIxS;MIMARKS:6.0

characteristic: elev

text: freshwater river biome

text: small river biome

text: biofilm material

text: Canada:Sooke River

text: 48.44 N 123.719 W

characteristic: lat lon

text: biofilm metagenome

text: Sooke River biofilms


Cowichan River biofilm

text: University of Alberta

characteristic: INSDC last update

text: live

text: MIGS/MIMS/MIMARKS.microbial

text: MIMARKS.survey

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: freshwater river biome

text: small river biome

text: biofilm material

text: Canada:Cowichan River

text: 48.78 N 123.896 W

text: biofilm metagenome

text: Cowichan River biofilm


Nanaimo River biofilm

text: University of Alberta

characteristic: INSDC secondary accession

text: live

text: MIGS/MIMS/MIMARKS.microbial

text: MIMARKS.survey

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: freshwater river biome

text: small river biome

text: biofilm material

text: Canada:Nanaimo River

text: 49.07 N 123.934 W

text: biofilm metagenome

text: MIMARKS Survey related sample from biofilm metagenome


text: Michigan State University

text: live

characteristic: INSDC status

text: MIMAG

characteristic: bin number

text: This BioSample is a metagenomic assembly obtained from the soil metagenome BioSamples:SAMN06343827, SAMN06343828, SAMN06343829, SAMN06343830, SAMN06343831, SAMN06343832, SAMN06343833, SAMN06343834, SAMN06343835, SAMN06343836, SAMN06343837, and SAMN06343862

characteristic: derived-from

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: environmental sample

text: USA: Pennsylvania, Centralia

characteristic: isolate

text: soil

characteristic: isolation source

text: 40.80 N 76.34 W

text: soil metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Planctomycetota bacterium

text: metagenomic assembly

characteristic: sample-type

text: MIMAG Metagenome-assembled Genome sample from Planctomycetota bacterium


characteristic: External Id

text: Institute of Neuroscience

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Macaca fascicularis

characteristic: organism

text: GEO accession GSM3669335 is currently private and is scheduled to be released on May 31, 2025.


text: Institute of Neuroscience

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Macaca fascicularis

text: GEO accession GSM3669334 is currently private and is scheduled to be released on May 31, 2025.

characteristic: title


text: Institute of Neuroscience

text: live

characteristic: INSDC status

text: Generic

text: Macaca fascicularis

text: GEO accession GSM3669333 is currently private and is scheduled to be released on May 31, 2025.


text: Institute of Neuroscience

text: live

text: Generic

text: Macaca fascicularis

text: GEO accession GSM3669332 is currently private and is scheduled to be released on May 31, 2025.


text: Dankook University

text: live

text: Microbe, viral or environmental

text: 0 m

characteristic: altitude

text: Jeju Biological research institute

characteristic: biomaterial provider

characteristic: collection date

characteristic: depth

text: South Korea: Je-ju

characteristic: geo loc name

text: seaweed

text: Rhodophyticola sp. CCM32

text: isolation from sea water

characteristic: sample type

characteristic: strain

text: Microbe sample from Rhodophyticola sp. CCM32


Planctomycetes bacterium E44_bin39

characteristic: External Id

text: University of Calgary

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

characteristic: environmental sample

text: Atlantic Ocean

characteristic: isolate

text: deep sea sediments associated with petroleum seepage

characteristic: isolation source

text: 26.28 N 86.81 W

characteristic: lat lon

text: marine sediment metagenome

characteristic: metagenome source

characteristic: metagenomic

text: This BioSample is a metagenomic assembly obtained from the marine sediment metagenome BioSamples: SAMN09811682.

characteristic: note

text: Planctomycetota bacterium

text: metagenomic assembly

text: Microbe sample from Planctomycetota bacterium


DSM 497

text: Fujian Academy of Agricultural Sciences

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: culture-collection

text: Germany

text: soil

characteristic: isolation-source

text: Halalkalibacterium halodurans

characteristic: organism

text: powder

text: DSM 497

text: Microbe sample from Halalkalibacterium halodurans

characteristic: title

text: type strain of Bacillus halodurans

characteristic: type material


name: Complete genome of Methanofollis formosanus ML15

characteristic: External Id

text: National Chung Hsing University

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: Prof. Mei-Chin Lai

characteristic: biomaterial provider

characteristic: collection date

characteristic: culture collection

text: Taiwan: Wang-gong, Changhua County

characteristic: geo loc name

text: aquaculture fishpond

text: Methanofollis formosanus

text: isolate

characteristic: sample type

characteristic: strain

text: Microbe sample from Methanofollis formosanus

text: type strain of Methanofollis formosanus


text: Japanese Foundation Cancer Research

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Homo sapiens

text: mRNA from Patient Derived Xenograft sample

text: xenograft tumor

characteristic: tissue


text: Japanese Foundation Cancer Research

text: live

text: Generic

characteristic: NCBI submission package

text: gastric cancer

characteristic: disease

text: Homo sapiens

characteristic: organism

text: juvenile gastric cancer tissue

characteristic: title


characteristic: External Id

text: UC Davis

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Viral

text: Phi6 stocks provided by Dr Lin Chao (UCSD)

characteristic: description

text: USA

text: stock phi6 lysate

characteristic: isolate

text: Agar plate

characteristic: isolation source

text: Pseudomonas syringae pathovar HB10Y

characteristic: lab host

text: Cystovirus phi6

text: Phi6 without DMSO treatment


text: UC Davis

text: live

text: Viral

characteristic: SRA accession

characteristic: collection date

text: USA

characteristic: geo loc name

text: stock phi6 lysate

text: Agar plate

text: Pseudomonas syringae pathovar HB10Y

text: Cystovirus phi6

text: Phi6 treated with 15% DMSO


text: UC Davis

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Viral

text: USA

text: stock phi6 lysate

text: Agar plate

text: Pseudomonas syringae pathovar HB10Y

text: Cystovirus phi6

text: Phi6 treated with 50% DMSO


text: UC Davis

text: live

text: Viral

characteristic: NCBI submission model

characteristic: NCBI submission package

text: USA

text: stock phi6 lysate

text: Agar plate

text: Pseudomonas syringae pathovar HB10Y

text: Cystovirus phi6

text: Phi 6 treated with 90% DMSO


text: veterinary clinical/research| cow

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

text: live

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: OADDL - OK

characteristic: collected by

text: Salmonella

characteristic: genus

text: USA:OK

text: feces (Bos taurus)

text: bos taurus:NCBITAXON_9913, feces:UBERON_0001988

characteristic: ontological term

text: Salmonella enterica

characteristic: organism

text: animal

characteristic: source type

text: enterica

characteristic: species

characteristic: strain

text: Pathogen: environmental/food/other sample from Salmonella enterica


characteristic: External Id

text: veterinary clinical/research| other animal

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: North Carolina

characteristic: collection date

text: Escherichia

text: USA:NC

text: equine uterus (Equus caballus)

characteristic: isolation source

text: equus caballus:NCBITAXON_9796, uterus:UBERON_0000995

text: Escherichia coli

text: animal

text: coli

text: Pathogen: environmental/food/other sample from Escherichia coli

characteristic: title


text: The University of Hong Kong

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: This BioSample is a metagenomic assembly obtained from the wastewater metagenome BioSample: SAMN11098870

characteristic: derived-from

text: genome assembled from metagenome

characteristic: description

characteristic: environmental sample

text: Germany

characteristic: geo loc name

characteristic: isolate

text: anammox biofilm in wastewater treatment plant

text: 51.60 N 7.13 E

characteristic: lat lon

text: wastewater metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Candidatus Brocadia sp.

text: metagenomic assembly

characteristic: sample type


characteristic: External Id

text: CDC GCWGS

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: SRA accession

text: CDC

characteristic: collected by

text: Homo sapiens

characteristic: host

text: gonorrhea

characteristic: host disease

text: Neisseria gonorrhoeae

characteristic: organism

characteristic: strain

text: GCWGS


text: veterinary clinical/research| cow

characteristic: IFSAC+ Category

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: NY-Vet-LIRN

characteristic: collection date

text: Listeria

characteristic: genus

text: USA:NY

text: brain (Bos taurus)

characteristic: isolation source

text: bos taurus:NCBITAXON_9913, brain:UBERON_0000955

characteristic: ontological term

text: Listeria monocytogenes

text: animal

characteristic: source type

text: monocytogenes

characteristic: species

text: Pathogen: environmental/food/other sample from Listeria monocytogenes

characteristic: title


characteristic: External Id

text: Shandong university at Weihai

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: Germany

characteristic: geo loc name

text: Galium album

characteristic: host

text: Mucilaginibacter phyllosphaerae

characteristic: organism

text: tissue sample

characteristic: sample type

text: Microbe sample from Mucilaginibacter phyllosphaerae

text: type strain of Mucilaginibacter phyllosphaerae

characteristic: type-material


text: Jiangsu University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: China:Tibet

text: Tibet

text: Natronorubrum halophilum

text: single cell

characteristic: strain

text: Microbe sample from Natronorubrum halophilum


text: Jiangsu University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: China:Tibet

text: Salt Lake

characteristic: isolation source

text: Halorientalis salina

text: single cell

text: Microbe sample from Halorientalis salina

text: type strain of Halorientalis salina


text: Delft University of Technology

text: live

text: Microbe, viral or environmental

text: wastewater/sludge

characteristic: description

text: Netherlands: Delft

text: activated sludge metagenome

text: Enrichment culture

text: 52.0090 N 4.3569 E

characteristic: lat lon

text: Candidatus Accumulibacter delftensis

text: Candidatus Accumulibacter delftensis: a clade IC novel polyphosphate-accumulating organism without denitrifying activity on nitrate

text: facultative

text: gDNA extraction, metagenomic library, Illumina MiSeq sequencing, genome binning and annotation

characteristic: samp mat process

text: Grab sample from bioreactor

text: Microbe sample from Candidatus Accumulibacter delftensis


characteristic: External Id

text: Delft University of Technology

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: wastewater/sludge

text: Netherlands: Delft

text: activated sludge metagenome

text: Enrichment culture

text: 52.0090 N 4.3569 E

text: Candidatus Nocardioides delftensis

text: facultative

text: Grab sample from bioreactor

text: Microbe sample from Candidatus Nocardioides delftensis

characteristic: title


text: Delft University of Technology

text: live

text: Microbe, viral or environmental

text: wastewater/sludge

text: Netherlands: Delft

characteristic: geo loc name

text: activated sludge metagenome

characteristic: host

text: Enrichment culture

text: 52.0090 N 4.3569 E

text: Candidatus Thermomonas delftensis

characteristic: organism

text: facultative

text: Grab sample from bioreactor

text: Microbe sample from Candidatus Thermomonas delftensis


text: Biochemistry and Molecular Medicine, UC Davis School of Medicine

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: HBMSC 3.4 human bone marrow stem cells

characteristic: cell type

text: Homo sapiens

text: HBMSC 3.4 human bone marrow stem cells

text: cell culture

characteristic: tissue


characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: HBMSC 3.4 (clone 6) xenograft tumor grown subcutaneously

text: Homo sapiens

text: HBMSC 3.4 (clone 6) xenograft tumor (subcutaneous)

text: xenograft tumor


text: live

text: Generic

text: HBMSC 3.4 (clone 6) xenograft tumor grown in mammary fat pad

text: Homo sapiens

text: HBMSC 3.4 (clone 6) xenograft tumor (mammary fat pad)

text: xenograft tumor


text: live

text: Generic

text: Immortalized subline of HBMSC 3.4 (clone 6)

text: Homo sapiens

text: HBMSC 3.4 (clone 6)

text: cell culture


text: Cancer Resistance, Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences

text: live

text: Generic

characteristic: cell line

text: Derived from the prostate tisue of a human patient

characteristic: cell line source

text: Primary normal human prostate stromal cells

text: Homo sapiens

text: PSC27_treated with bleomycin and STING deficiency

characteristic: treatment


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: Homo sapiens

text: treated with bleomycin and STING deficiency


text: live

text: Generic

text: Homo sapiens

text: PSC27_treated with bleomycin and CCCP

characteristic: title

text: treated with bleomycin and CCCP


text: live

text: Generic

text: Homo sapiens

text: PSC27_treated with bleomycin and SB203580

text: treated with bleomycin and SB203580


text: live

text: Generic

text: Homo sapiens

text: PSC27_treated with bleomycin in culture

text: treated with bleomycin in culture


text: live

text: Generic

text: Homo sapiens

text: PSC27_untreated in culture

text: untreated in culture


text: live

text: Generic

text: Homo sapiens

text: PSC27_treated with bleomycin and RU.521

text: treated with bleomycin and RU.521


text: DA LIAN MEDIACAL UNIVERSITY

text: live

text: Generic

text: AURKA KD

characteristic: genotype

text: Homo sapiens


text: DA LIAN MEDIACAL UNIVERSITY

text: live

text: Generic

text: control

text: Homo sapiens

characteristic: organism


text: Yangzhou University

characteristic: INSDC first public

text: live

text: Generic

text: SS

characteristic: cultivar

text: three-leaf stage

characteristic: developmental stage

text: Zea mays

text: Young shoot

text: Young shoot

text: salinity


text: Yangzhou University

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: ST

text: three-leaf stage

text: Zea mays

text: Root

text: Root

text: salinity


text: Yangzhou University

characteristic: INSDC last update

text: live

text: Generic

text: SS

text: three-leaf stage

text: Zea mays

text: Young shoot

text: Young shoot

characteristic: tissue

text: water


text: Yangzhou University

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: SS

text: three-leaf stage

text: Zea mays

text: Root

text: Root

text: salinity


text: Yangzhou University

text: live

text: Generic

characteristic: NCBI submission package

text: SS

text: three-leaf stage

text: Zea mays

text: Root

text: Root

text: water


text: chinese academy of science

text: live

text: Generic

text: mixture of BDE-47, BDE-209, TBBPA, TBBPS, TCBPA

characteristic: agent

characteristic: cell lie

text: Homo sapiens

text: Neural ectoderm

text: embryo


characteristic: External Id

text: chinese academy of science

text: live

text: Generic

text: TCBPA

text: Homo sapiens

text: Neural ectoderm

text: embryo


text: chinese academy of science

characteristic: INSDC center name

text: live

text: Generic

text: TBBPS

text: Homo sapiens

text: Neural ectoderm

text: embryo


BJ

text: korea university

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: South Korea: Baekje barrage

characteristic: geo loc name

text: Cyanobacterial bloom

characteristic: isolation source

text: 36.27 N 126.89 E

characteristic: lat lon

text: Rhizorhabdus phycosphaerae

characteristic: strain

text: Microbe sample from Rhizorhabdus phycosphaerae

characteristic: title

text: type strain of Rhizorhabdus phycosphaerae

characteristic: type-material


text: chinese academy of science

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: TBBPA

text: Homo sapiens

characteristic: organism

text: Neural ectoderm

text: embryo


text: chinese academy of science

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Homo sapiens

text: Neural ectoderm

text: embryo

characteristic: tissue


characteristic: External Id

text: chinese academy of science

text: live

text: Generic

characteristic: NCBI submission package

text: control

characteristic: agent

characteristic: cell lie

text: Homo sapiens

text: Neural ectoderm

text: embryo


text: Yangzhou University

characteristic: INSDC center name

text: live

text: Generic

text: ST

characteristic: cultivar

text: three-leaf stage

characteristic: developmental stage

text: Zea mays

text: Young shoot

text: Young shoot

text: salinity

characteristic: treatment


text: Yangzhou University

text: live

text: Generic

text: ST

text: three-leaf stage

text: Zea mays

text: Young shoot

text: Young shoot

characteristic: title

text: water


text: Yangzhou University

characteristic: INSDC first public

text: live

text: Generic

text: ST

text: three-leaf stage

text: Zea mays

text: Root

text: Root

text: water


Glast+ astrocytes 2h vehicle

text: Biomedical Research Foundation, Academy of Athens

text: live

text: Model organism or animal

text: Neonatal P0-P3

characteristic: age

text: astrocytes

characteristic: cell type

text: sorted Glast+ CD11b- cells from mixed glia cultures

characteristic: description

text: Mus musculus

text: cell culture

characteristic: sample type

text: male and female

characteristic: sex

characteristic: strain

text: brain

text: Model organism or animal sample from Mus musculus

text: vehicle 2h


Glast+ astrocytes 24h vehicle

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

text: Neonatal P0-P3

text: astrocytes

text: Mus musculus

characteristic: organism

text: cell culture

text: male and female

text: brain

characteristic: tissue

text: vehicle 24h


Glast+ astrocytes 2h TGF1

characteristic: External Id

characteristic: INSDC center name

text: live

text: Model organism or animal

characteristic: NCBI submission package

text: Neonatal P0-P3

text: astrocytes

text: Mus musculus

text: cell culture

text: male and female

text: brain

text: recombinant mouse TGF1 2h


Glast+ astrocytes 24h TGF1

text: live

text: Model organism or animal

text: Neonatal P0-P3

text: astrocytes

text: Mus musculus

text: cell culture

text: male and female

text: brain

text: recombinant mouse TGF1 24h

characteristic: treatment


Glast+ astrocytes 2h BMP4

text: live

text: Model organism or animal

text: Neonatal P0-P3

text: astrocytes

text: Mus musculus

text: cell culture

text: male and female

text: brain

characteristic: title

text: recombinant mouse BMP4 2h


Glast+ astrocytes 24h BMP4

characteristic: INSDC first public

text: live

text: Model organism or animal

text: Neonatal P0-P3

text: astrocytes

text: Mus musculus

text: cell culture

text: male and female

text: brain

text: recombinant mouse BMP4 24h


CD11b+ microglia 2h vehicle

text: live

text: Model organism or animal

text: Neonatal P0-P3

characteristic: age

text: microglia

text: sorted Glast- CD11b+ cells from mixed glia cultures

text: Mus musculus

text: cell culture

text: male and female

text: brain

text: vehicle 2h


CD11b+ microglia 24h vehicle

text: live

text: Model organism or animal

text: Neonatal P0-P3

text: microglia

characteristic: cell type

text: Mus musculus

text: cell culture

text: male and female

text: brain

text: vehicle 24h


CD11b+ microglia 2h TGF1

text: live

text: Model organism or animal

text: Neonatal P0-P3

text: microglia

characteristic: description

text: Mus musculus

text: cell culture

text: male and female

text: brain

text: recombinant mouse TGF1 2h


CD11b+ microglia 24h TGF1

text: live

text: Model organism or animal

text: Neonatal P0-P3

text: microglia

text: Mus musculus

text: cell culture

characteristic: sample type

text: male and female

text: brain

text: recombinant mouse TGF1 24h


CD11b+ microglia 2h BMP4

text: live

text: Model organism or animal

text: Neonatal P0-P3

text: microglia

text: Mus musculus

text: cell culture

text: male and female

characteristic: sex

text: brain

text: recombinant mouse BMP4 2h


CD11b+ microglia 24h BMP4

text: live

text: Model organism or animal

text: Neonatal P0-P3

text: microglia

text: Mus musculus

text: cell culture

text: male and female

characteristic: strain

text: brain

text: recombinant mouse BMP4 24h


text: In-Hyun Park lab, Genetics, Yale University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: H7 hESCs

characteristic: cell line

text: CCNE1 (ab133266, abcam)

characteristic: chip antibody

text: Control shRNA KD

characteristic: genotype/variation

text: Homo sapiens

text: H7 hESCs_genomic binding of CCNE1

text: CCNE1 ChIP (ab133266)


characteristic: External Id

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: H7 hESCs

text: none (input)

text: wild type control

text: Homo sapiens

characteristic: organism

text: H7 hESCs_Input for ChIP

text: Input for CCNE1 ChIP (ab7959)


characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

text: H7 hESCs

text: CCNE1 (ab7959, abcam)

text: wild type control

text: Homo sapiens

text: H7 hESCs_genomic binding of CCNE1

text: CCNE1 ChIP (ab7959)

characteristic: title


text: live

text: Generic

text: H7 hESCs

text: naïve (5iLA) medium

characteristic: culture medium

text: Homo sapiens

text: 5iLA hESCs

text: 5iLA hESCs [GRO-seq]


text: live

text: Generic

text: H7 hESCs

text: naïve (t2iGo) medium

text: Homo sapiens

text: t2iGo hESCs

text: t2iGo hESCs [GRO-seq]


text: live

text: Generic

text: H7 hESCs

text: Primed

text: Homo sapiens

text: Primed hESCs

text: Primed hESCs [GRO-seq]


text: live

text: Generic

text: H7 hESCs

text: Homo sapiens

text: H7 hESCs_5iLA naïve hESCs

text: 5iLA Naïve

characteristic: state

text: 5iLA naïve hESCs

text: No treatment

characteristic: treatment


characteristic: INSDC last update

text: live

text: Generic

text: H7 hESCs

text: Homo sapiens

text: H7 hESCs_Primed hESCs

text: Primed

text: Primed hESCs

text: No treatment


characteristic: INSDC secondary accession

text: live

text: Generic

text: H1 hESCs

text: Homo sapiens

text: H1 hESCs_pCCNE1 KD t2iGo

text: t2iGo Naïve

text: 5 days after lentiviral infection

characteristic: time

text: pCCNE1 KD t2iGo

text: shRNA KD for pCCNE1


text: live

text: Generic

characteristic: SRA accession

text: H1 hESCs

characteristic: cell line

text: Homo sapiens

text: H1 hESCs_uCCNE1 KD t2iGo

text: t2iGo Naïve

text: 5 days after lentiviral infection

text: uCCNE1 KD t2iGo

text: shRNA KD for uCCNE1


text: live

text: Generic

text: H1 hESCs

text: Homo sapiens

text: H1 hESCs_Ctrl t2iGo

text: t2iGo Naïve

text: 5 days after lentiviral infection

text: Ctrl t2iGo

text: Control shRNA KD


text: live

text: Generic

text: H7 hESCs

text: Homo sapiens

text: H7 hESCs_pCCNE1 KD 5iLA

text: 5iLA Naïve

text: 5 days after lentiviral infection

text: pCCNE1 KD 5iLA

text: shRNA KD for pCCNE1


text: live

text: Generic

text: H7 hESCs

text: Homo sapiens

text: H7 hESCs_uCCNE1 KD 5iLA

text: 5iLA Naïve

text: 5 days after lentiviral infection

text: uCCNE1 KD 5iLA

text: shRNA KD for uCCNE1


text: live

text: Generic

text: H7 hESCs

text: Homo sapiens

text: H7 hESCs_Ctrl 5iLA

text: 5iLA Naïve

text: 5 days after lentiviral infection

text: Ctrl 5iLA

text: Control shRNA KD


text: live

text: Generic

text: H1 hESCs

text: Homo sapiens

text: H1 hESCs_pCCNE1 KD Primed

text: Primed

text: 5 days after lentiviral infection

text: pCCNE1 KD Primed

text: shRNA KD for pCCNE1


text: live

text: Generic

text: H1 hESCs

text: Homo sapiens

text: H1 hESCs_uCCNE1 KD Primed

text: Primed

text: 5 days after lentiviral infection

text: uCCNE1 KD Primed

text: shRNA KD for uCCNE1


text: live

text: Generic

text: H1 hESCs

text: Homo sapiens

text: H1 hESCs_Ctrl Primed

text: Primed

text: 5 days after lentiviral infection

text: Ctrl Primed

text: Control shRNA KD


text: live

text: Generic

text: H7 hESCs

text: none (input)

characteristic: chip antibody

text: Control shRNA KD

characteristic: genotype/variation

text: Homo sapiens

text: H7 hESCs_Input for ChIP

text: 5iLA input


characteristic: External Id

text: UMCU

characteristic: INSDC center name

text: live

text: Pathogen.cl

text: UMCU

text: Netherlands:Utrecht

text: Homo sapiens

characteristic: host

text: cystic fibrosis

text: sputum

text: 52.09 N 5.12 E

text: Pseudomonas aeruginosa

characteristic: strain

text: Pathogen: clinical or host-associated sample from Pseudomonas aeruginosa


text: Chengdu Kanghong Pharmaceutical Co., Ltd.

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Keluoxin-treatment

characteristic: agent

text: Mus musculus

characteristic: organism

text: Retinal

text: retinal

characteristic: tissue


characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission package

text: model

text: Mus musculus

text: Retinal

text: retinal

characteristic: title


Anoxybacillus acidilactici LMG 31262

text: Microbion Srl

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: Italy

characteristic: geo loc name

text: UHT sterilized milk

characteristic: isolation source

text: Anoxybacillus sp. LMG 31262

text: cell culture

characteristic: sample type

text: LMG 31262

text: Microbe sample from Anoxybacillus sp. LMG 31262


Claviceps lovelessii CCC647

characteristic: External Id

text: Colorado State University

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: D. Frederickson

characteristic: collected by

characteristic: culture collection

text: Zimbabwe: Matopos, Matopos Research Station

text: Eragrostis sp.

text: sphacelia

text: Claviceps lovelessii

text: CCC 647

text: Pathogen: environmental/food/other sample from Claviceps lovelessii


Claviceps monticola CCC1483

text: Colorado State University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Pathogen.env

text: Elna J. van der Linde

text: South Africa: Hogsback, Eastern Cape

text: Brachypodium sp.

characteristic: host

text: sclerotium

text: Claviceps monticola

text: CCC 1483

characteristic: strain

text: Pathogen: environmental/food/other sample from Claviceps monticola

text: culture from holotype of Claviceps monticola

characteristic: type material


Claviceps pazoutovae CCC1485

text: Colorado State University

characteristic: INSDC last update

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Elna J. van der Linde

text: South Africa: Hogsback, Eastern Cape

text: Stipa dregeana

text: sclerotium

text: Claviceps pazoutovae

characteristic: organism

text: CCC 1485

text: Pathogen: environmental/food/other sample from Claviceps pazoutovae

text: culture from holotype of Claviceps pazoutovae


Claviceps capensis CCC1504

text: Colorado State University

text: live

text: Pathogen.env

text: Elna J. van der Linde

characteristic: collection date

text: South Africa: Cape Town, Western Cape

characteristic: geo loc name

text: Ehrharta villosa

text: sclerotium

characteristic: isolation source

text: Claviceps capensis

text: CCC 1504

text: Pathogen: environmental/food/other sample from Claviceps capensis

characteristic: title

text: culture from holotype of Claviceps capensis


characteristic: External Id

text: Shanghai Center for Plant Stress Biology

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: 14 d

characteristic: age

characteristic: ecotype

text: WT, EDM2

characteristic: genotype/variation

text: Arabidopsis thaliana

text: 14 d seedlings

text: whole seedlings

characteristic: tissue


characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Generic

text: 14 d

text: Anti-Flag, Sigma , F1804

characteristic: antibody

text: WT, EDM2

text: Arabidopsis thaliana

text: 14 d seedlings

text: whole seedlings


characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 14 d

text: Arabidopsis thaliana

text: 14 d seedlings

text: whole seedlings


text: live

text: Generic

text: 14 d

text: Anti-Flag, Sigma , F1804

text: Arabidopsis thaliana

characteristic: organism

text: 14 d seedlings

text: whole seedlings


text: live

text: Generic

text: 14 d

text: WT, ASl1

text: Arabidopsis thaliana

text: 14 d seedlings

text: whole seedlings


text: live

text: Generic

text: 14 d

text: Anti-Flag, Sigma , F1804

text: WT, ASl1

text: Arabidopsis thaliana

text: 14 d seedlings

text: whole seedlings


text: shandong university

text: live

text: Microbe, viral or environmental

text: China

text: environment

text: Escherichia coli

text: whole organism

characteristic: strain

text: Microbe sample from Escherichia sp. 40


text: shandong university

text: live

text: Microbe, viral or environmental

text: China

text: environment

text: Shewanella xiamenensis

text: whole organism

text: Microbe sample from Shewanell

characteristic: title


characteristic: External Id

text: Wihuri Research Insitute

text: live

text: Generic

text: postnatal day 7

text: control wildtype (WT) animal

text: Mus musculus

text: Cardiac endothelial cells

characteristic: strain background

text: Cardiac endothelial cells

text: aMHC-Vegfb p7 WT


text: Wihuri Research Insitute

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: postnatal day 7

text: cardiomyocyte-specific overexpression of VEGFB (transgenic (TG) animal)

text: Mus musculus

text: Cardiac endothelial cells

text: Cardiac endothelial cells

text: aMHC-Vegfb p7 TG


text: Wihuri Research Insitute

text: live

text: Generic

text: 3-4 months

characteristic: age

text: Control (S2) AAV transduced animal

text: Mus musculus

text: Cardiac endothelial cells

text: Cardiac endothelial cells


text: Wihuri Research Insitute

text: live

text: Generic

text: 3-4 months

text: AAV9-Vegfb transduced animal

characteristic: genotype/variation

text: Mus musculus

text: Cardiac endothelial cells

text: Cardiac endothelial cells


text: live

text: Generic

text: 14 d

characteristic: ecotype

text: WT

text: Arabidopsis thaliana

text: 14 d seedlings

text: whole seedlings

characteristic: tissue

text: WT-RIP-input


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: 14 d

text: WT

text: Arabidopsis thaliana

text: 14 d seedlings

text: whole seedlings


text: Japanese Foundation For Cancer Research

text: live

characteristic: INSDC status

text: Generic

text: 60 <= year < 65

characteristic: age range

text: Homo sapiens

text: female

characteristic: sex

text: Gastric Cancer tissue.

text: gastric cancer tumor


text: Japanese Foundation For Cancer Research

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 85 <= year < 90

text: Homo sapiens

text: female

text: Gastric Cancer tissue.

text: gastric cancer tumor


text: Japanese Foundation For Cancer Research

text: live

text: Generic

text: 65 <= year < 70

text: Homo sapiens

characteristic: organism

text: male

text: Gastric Cancer tissue.

text: gastric cancer tumor

characteristic: title


characteristic: External Id

text: Japanese Foundation For Cancer Research

text: live

text: Generic

text: 30 <= year < 35

text: Homo sapiens

text: female

text: Gastric Cancer tissue.

text: gastric cancer tumor


text: Japanese Foundation For Cancer Research

text: live

text: Generic

text: 70 <= year < 75

text: Homo sapiens

text: male

text: Gastric Cancer tissue.

text: gastric cancer tumor


text: Japanese Foundation For Cancer Research

text: live

text: Generic

text: 80 <= year < 85

text: Homo sapiens

text: male

text: Gastric Cancer tissue.

text: gastric cancer tumor


text: Japanese Foundation For Cancer Research

text: live

text: Generic

text: 65 <= year < 70

text: Homo sapiens

text: female

text: Gastric Cancer tissue.

text: gastric cancer tumor


text: Japanese Foundation For Cancer Research

text: live

text: Generic

text: 60 <= year < 65

text: Homo sapiens

text: male

text: Gastric Cancer tissue.

text: gastric cancer tumor


text: Japanese Foundation For Cancer Research

text: live

text: Generic

text: 50 <= year < 55

text: Homo sapiens

text: male

text: Gastric Cancer tissue.

text: gastric cancer tumor


text: Japanese Foundation For Cancer Research

text: live

text: Generic

text: 55 <= year < 60

text: Homo sapiens

text: male

text: Gastric Cancer tissue.

text: gastric cancer tumor


text: Japanese Foundation For Cancer Research

text: live

text: Generic

text: 35 <= year < 40

text: Homo sapiens

text: male

text: Gastric Cancer tissue.

text: gastric cancer tumor


text: Japanese Foundation For Cancer Research

text: live

text: Generic

text: 70 <= year < 75

text: Homo sapiens

text: female

text: Gastric Cancer tissue.

text: gastric cancer tumor


Nasal microbiome

text: Icahn School of Medicine

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: Nasal microbiome isolated from healthy individuals using four different sampling methods: anterior swab, posterior swab, anterior brush, washing

characteristic: description

text: nasal cavity

text: anterior swab, posterior, swab, anterior brush, washing

text: USA: New York, NY

text: Homo sapiens

characteristic: host

text: nose

text: 40 N 73 W

text: human nasopharyngeal metagenome

text: MIMS Environmental/Metagenome sample from missing


text: Laval University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: Canada: Quebec

characteristic: geo loc name

text: Salvelinus fontinalis

text: whole organism

characteristic: sample type

characteristic: strain

text: salmonicida

characteristic: sub species

text: Microbe sample from Aeromonas salmonicida subsp. salmonicida


name: Mycoplasma conjunctive_HOVET USP_Sao Paulo_2018

text: Universidade de Sao Paulo

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: Mycoplasma conjunctivae isolated from ocular sample of sheep from a teaching hospital, Sao Paulo, Brazil

text: Brazil: Sao Paulo

text: Ovis aries

text: Sheep

characteristic: isolate

text: sheep without infectious keratoconjunctivitis

characteristic: isolation source

text: Mesomycoplasma conjunctivae

text: ocular swab

text: Microbe sample from Mycoplasma conjunctivae


text: Yantai University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Plant

characteristic: SRA accession

text: China:Rongcheng

text: control replicate 1

text: Gracilaria vermiculophylla

text: algae frond

characteristic: tissue


characteristic: External Id

text: Yantai University

text: live

text: Plant

characteristic: NCBI submission model

characteristic: NCBI submission package

text: China:Rongcheng

text: control replicate 2

text: Gracilaria vermiculophylla

characteristic: organism

text: algae frond

characteristic: title


text: Yantai University

text: live

text: Plant

text: China:Rongcheng

characteristic: geo loc name

text: control replicate 3

text: Gracilaria vermiculophylla

text: algae frond


text: Yantai University

text: live

text: Plant

text: China:Rongcheng

text: heat stress replicate 1

text: Gracilaria vermiculophylla

text: algae frond


text: Yantai University

text: live

text: Plant

text: China:Rongcheng

text: heat stress replicate 2

text: Gracilaria vermiculophylla

text: algae frond


text: Yantai University

text: live

text: Plant

text: China:Rongcheng

text: heat stress replicate 3

text: Gracilaria vermiculophylla

text: algae frond


text: University of Malaya

text: live

text: Microbe, viral or environmental

text: Kah-Ooi Chua

characteristic: collected by

characteristic: collection date

characteristic: culture collection

text: Malaysia: Kuala Lumpur

text: Oecophylla smaragdina

characteristic: host

text: Formicincola oecophyllae

text: Cell culture

characteristic: sample type

characteristic: strain

text: Microbe sample from Formicincola oecophyllae

text: type strain of Formicincola oecophyllae

characteristic: type-material


Mock_G. herbaceum subs. Africanum_A1-a

text: Zhejiang University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Plant

text: China: Hainan

text: G. herbaceum subs. Africanum

characteristic: isolate

text: Gossypium

text: leaf

text: Mock_G. herbaceum subs. Africanum_A1-a


Mock_G. arboreum acc. Shixiya 1_ A2

characteristic: External Id

text: Zhejiang University

text: live

characteristic: INSDC status

text: Plant

text: China: Hainan

text: G. arboreum acc. Shixiya 1

text: Gossypium

text: leaf

characteristic: tissue

text: Mock_G. arboreum acc. Shixiya 1_ A2


Wallemia hederae EXF-5753

text: Biotechnical Faculty, University of Ljubljana

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: EX culture collection of the University of Ljubljana (Infrastructural Centre Mycosmo, MRIC UL)

characteristic: biomaterial provider

text: EX:SVN EXF-5753

text: Slovenia

text: Hedera helix

text: pollen

characteristic: isolation source

text: Wallemia hederae

characteristic: organism

text: pollen

text: culture from holotype of Wallemia hederae

characteristic: type material


text: Working Group Mattanovich, Department of Biotechnology, University of Natural Resources and Life Sciences

text: live

text: Generic

text: wildtype

characteristic: genotype

text: Trichoderma reesei QM6a

text: T. reesei RNA

characteristic: strain

characteristic: title

text: type material of Trichoderma reesei


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Trichoderma reesei QM6a

text: T. reesei RNA

text: delta_ace1_replicate 3

text: type material of Trichoderma reesei


characteristic: INSDC last update

text: live

text: Generic

text: Trichoderma reesei QM6a

text: T. reesei RNA

text: delta_ace1_replicate 2

text: type material of Trichoderma reesei


characteristic: External Id

text: live

text: Generic

text: Trichoderma reesei QM6a

text: T. reesei RNA

text: delta_ace1_replicate 1

text: type material of Trichoderma reesei


text: Radboud University Medical Centre

text: live

characteristic: INSDC status

text: Pathogen.cl

text: Radboud university medical centre, Nijmegen, the Netherlands

characteristic: collected by

characteristic: collection date

text: Netherlands

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: Invasive aspergillosis

characteristic: host disease

text: Fluid, mass around clavicle (right)

text: Aspergillus fumigatus

text: Pathogen: clinical or host-associated sample from Aspergillus fumigatus


text: Radboud University Medical Centre

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Netherlands

text: Homo sapiens

text: Invasive aspergillosis

text: Pus shoulder (right)

text: Aspergillus fumigatus


text: Radboud University Medical Centre

text: live

text: Pathogen.cl

text: Netherlands

text: Homo sapiens

text: Invasive aspergillosis

text: Tissue shoulder (right)

characteristic: isolation source

text: Aspergillus fumigatus

characteristic: organism


text: Radboud University Medical Centre

text: live

text: Pathogen.cl

text: Netherlands

text: Homo sapiens

text: Invasive aspergillosis

text: bronchoalveolar lavage

text: Aspergillus fumigatus

characteristic: strain

characteristic: title


text: Medical & Molecular Genetics, Indiana University School of Medicine

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: MIA PaCa-2

characteristic: cell line

text: miR-29 overexpressing

characteristic: genotype

text: Homo sapiens

text: pancreatic carcinoma of ductal origin

characteristic: origin

text: MIA PaCa-2 Mir-29a OE

text: MIA PaCa-2 Mir-29a OE Replicate4


characteristic: External Id

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: MIA PaCa-2

text: miR-29 overexpressing

text: Homo sapiens

text: pancreatic carcinoma of ductal origin

text: MIA PaCa-2 Mir-29a OE

text: MIA PaCa-2 Mir-29a OE Replicate2


text: live

text: Generic

text: MIA PaCa-2

text: miR-29 overexpressing

text: Homo sapiens

text: pancreatic carcinoma of ductal origin

text: MIA PaCa-2 Mir-29a OE

text: MIA PaCa-2 Mir-29a OE Replicate1


text: live

text: Generic

text: MIA PaCa-2

text: Control

text: Homo sapiens

text: pancreatic carcinoma of ductal origin

text: MIA PaCa-2 Control

text: MIA PaCa-2 Control Replicate4


text: live

text: Generic

text: MIA PaCa-2

text: Control

text: Homo sapiens

text: pancreatic carcinoma of ductal origin

text: MIA PaCa-2 Control

text: MIA PaCa-2 Control Replicate2


text: live

text: Generic

text: MIA PaCa-2

text: Control

text: Homo sapiens

text: pancreatic carcinoma of ductal origin

text: MIA PaCa-2 Control

text: MIA PaCa-2 Control Replicate1


text: live

text: Generic

text: miR-29 overexpressing

text: Homo sapiens

text: pancreatic carcinoma of ductal origin

text: Panc-1 Mir-29a OE

text: Panc-1 Mir-29a OE Replicate3


text: live

text: Generic

text: miR-29 overexpressing

text: Homo sapiens

text: pancreatic carcinoma of ductal origin

text: Panc-1 Mir-29a OE

text: Panc-1 Mir-29a OE Replicate2


text: live

text: Generic

text: miR-29 overexpressing

text: Homo sapiens

text: pancreatic carcinoma of ductal origin

text: Panc-1 Mir-29a OE

text: Panc-1 Mir-29a OE Replicate1


text: live

text: Generic

text: Control

text: Homo sapiens

text: pancreatic carcinoma of ductal origin

text: Panc-1 Control

text: Panc-1 Control Replicate3


text: live

text: Generic

text: Control

text: Homo sapiens

text: pancreatic carcinoma of ductal origin

text: Panc-1 Control

text: Panc-1 Control Replicate2


text: live

text: Generic

text: Control

text: Homo sapiens

text: pancreatic carcinoma of ductal origin

text: Panc-1 Control

text: Panc-1 Control Replicate1


text: Salmonella

characteristic: Genus

text: environmental-factory/production facility

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

text: live

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

text: enterica

characteristic: Species

text: environmental/food/other

text: FDA

text: Brazil

text: food contact surface

text: food contact surface:FOODON_03500010

characteristic: ontological term

text: Salmonella enterica

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: environmental

characteristic: source type

text: Pathogen: environmental/food/other sample from Salmonella enterica


mixed Caudovirales

text: Texas A&M University

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Viral

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: collection date

text: mixture of Acinetobacter, and phages of Citrobacter, Salmonella, Proteus

characteristic: description

text: USA: Texas

characteristic: geo loc name

text: mixed isolates

characteristic: isolate

text: mixed environmental samples

characteristic: isolation source

text: Caudoviricetes

characteristic: organism

text: Viral sample from Caudoviricetes

characteristic: title


characteristic: External Id

text: environmental

characteristic: IFSAC+ Category

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: OSU FAHRP 139

characteristic: collected by

text: Listeria

characteristic: genus

text: USA:OH

text: manure

text: animal manure:ENVO_00003031

text: Listeria monocytogenes

text: environmental

text: monocytogenes

characteristic: species

characteristic: strain

text: Pathogen: environmental/food/other sample from Listeria monocytogenes


text: veterinary clinical/research| pig

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: North Carolina State University | College of Veterinary Medicine | Thakur Molecular Epidemiology Laboratory

characteristic: collection date

text: Salmonella

text: USA:NC

text: lymphnode (Sus scrofa)

text: lymph node:UBERON_0000029, sus scrofa:NCBITAXON_9823

characteristic: ontological term

text: Salmonella enterica

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: animal

characteristic: source type

text: enterica


characteristic: External Id

text: veterinary clinical/research| pig

characteristic: IFSAC+ Category

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: Salmonella

text: USA:NC

characteristic: geo loc name

text: feces (Sus scrofa)

characteristic: isolation source

text: feces:UBERON_0001988, sus scrofa:NCBITAXON_9823

text: Salmonella enterica

characteristic: organism

text: GenomeTrakr

text: animal

text: enterica

characteristic: title


mixed phage samples

text: Texas A&M University

characteristic: INSDC center name

text: live

text: Viral

characteristic: NCBI submission model

characteristic: description

text: USA: Texas

text: mixed isolates

characteristic: isolate

text: mixed environmental samples

text: Caudoviricetes

text: Viral sample from Caudoviricetes


text: vegetable row crops

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission package

characteristic: PublicAccession

characteristic: SRA accession

text: OSU FAHRP 139

characteristic: collected by

characteristic: collection date

text: Listeria

characteristic: genus

text: USA:OH

text: cabbage

text: cabbage (whole, raw):FOODON_03301326

characteristic: ontological term

text: Listeria monocytogenes

text: food

text: monocytogenes

characteristic: species

characteristic: strain


characteristic: External Id

text: seeded vegetables (vine-grown)

characteristic: IFSAC+ Category

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: OSU FAHRP 139

text: Listeria

text: USA:OH

characteristic: geo loc name

text: cucumber

characteristic: isolation source

text: cucumber (whole, raw):FOODON_03301545

text: Listeria monocytogenes

text: food

characteristic: source type

text: monocytogenes


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: BLOOD

characteristic: body site

text: BLOOD

characteristic: histological type

text: Homo sapiens

characteristic: organism

text: female

characteristic: sex

text: Case-Control

characteristic: study design

characteristic: study name

text: No

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: DNA sample from BLOOD of a human female participant in the dbGaP study Large Scale Genotyping of Psychiatric Disorders

characteristic: title


characteristic: External Id

text: Guizhou University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Plant

characteristic: SRA accession

text: 3 months post transplanted on medium

characteristic: age

text: Zihonglong

characteristic: cultivar

text: 3 months post transplanted on medium

characteristic: dev stage

text: red pulp

characteristic: ecotype

text: China:Luodian, Guizhou

characteristic: geo loc name

text: tissue cultured seedlings growing under control condition

characteristic: isolate

text: Selenicereus monacanthus

text: stem

characteristic: tissue

text: Plant sample from Selenicereus monacanthus


text: Guizhou University

text: live

text: Plant

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 3 months post transplanted on medium

text: Zihonglong

text: 3 months post transplanted on medium

text: red pulp

text: China:Luodian, Guizhou

text: tissue cultured seedlings growing under drought condition

text: Selenicereus monacanthus

characteristic: organism

text: stem


characteristic: External Id

text: Guizhou University

text: live

text: Plant

text: 3 months post transplanted on medium

text: Zihonglong

text: 3 months post transplanted on medium

text: red pulp

text: China:Luodian, Guizhou

text: pooled tissue cultured seedlings growing under drought and control condition

text: Selenicereus monacanthus

text: stem

characteristic: title


text: veterinary clinical/research, companion animal

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: KS

characteristic: collected by

characteristic: collection date

text: Staphylococcus

characteristic: genus

text: USA:KS

text: Canis lupus familiaris Abscess swab

characteristic: isolation source

text: abscess:HP_0025615, canis lupus familiaris:NCBITAXON_9615, swab:NCIT_C17627

characteristic: ontological term

text: Staphylococcus pseudintermedius

text: animal

characteristic: source type

text: pseudintermedius

characteristic: species

characteristic: strain

text: Pathogen: environmental/food/other sample from Staphylococcus pseudintermedius


text: meat| pig

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: environmental/food/other

text: Salmonella

text: USA:NC

characteristic: geo loc name

text: carcass swab (Sus scrofa)

text: swine carcass:FOODON_03311719, swab:NCIT_C17627

text: Salmonella enterica

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: animal

text: enterica


characteristic: External Id

text: environmental

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: CFSAN/OARSA

characteristic: collected by

text: Listeria

text: USA:OH

text: soil

text: Listeria innocua

characteristic: organism

text: environmental

text: innocua

text: Pathogen: environmental/food/other sample from Listeria innocua

characteristic: title


name: mixture of Acinetobacter, and phages of Citrobacter, Salmonella, Proteus

text: Texas A&M University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Viral

characteristic: collection date

characteristic: description

text: USA: College Station

text: mixed isolates

characteristic: isolate

text: mixed environmental samples

characteristic: isolation source

text: Caudoviricetes

text: Viral sample from Caudoviricetes


name: mixture of Acinetobacter and phages of Rhodococcus, Bacillus, Klebsiella, Salmonella, Caulobacter

text: Texas A&M University

text: live

characteristic: INSDC status

text: Viral

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: USA: Texas

characteristic: geo loc name

text: mixed isolates

text: mixed environmental samples

text: Caudoviricetes

text: Viral sample from Caudoviricetes


name: mixture of Acinetobacter, and phages of Acidovorax, Proteus, Salmonella, Klebsiella

characteristic: External Id

text: Texas A&M University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Viral

text: USA: Texas

text: mixed isolates

text: mixed environmental samples

text: Caudoviricetes

text: Viral sample from Caudoviricetes


name: mixed phages of Klebsiella, E.coli, Bacillus, Rodococcus, Proteus, Staphylococcus

text: Texas A&M University

text: live

text: Viral

text: USA: Texas

text: mixed isolates

text: mixed environmental samples

text: Caudoviricetes

text: Viral sample from Caudoviricetes


name: mixed phages of E.coli, Bacillus, Rodococcus, Proteus, Klebsiella

text: Texas A&M University

text: live

text: Viral

text: USA: Texas

text: mixed isolates

text: mixed environmental samples

text: Caudoviricetes

text: Viral sample from Caudoviricetes


name: mixed phages of Klebsiella, Salmonella, Bacillus, Citrobacter, Proteus

text: Texas A&M University

text: live

text: Viral

text: USA: Texas

text: mixed isolates

text: mixed environmental samples

text: Caudoviricetes

text: Viral sample from Caudoviricetes


text: Iowa state university

text: live

text: Metagenome or environmental

characteristic: age

text: havva ilbagi

text: virus

characteristic: disease

text: Kirklareli

characteristic: ecotype

text: Turkey:Kirklareli

text: plant metagenome

text: Leaf samples

characteristic: tissue

text: Plant sample from virus


text: Iowa state university

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: havva ilbagi

text: virus

text: Turkey:Kirklareli

text: plant metagenome

characteristic: organism

text: Leaf samples

text: Plant sample from virus

characteristic: title


text: Iowa state university

text: live

text: Metagenome or environmental

text: havva ilbagi

text: virus

text: Tekirdag

text: Turkey:Tekirdag

characteristic: isolate

text: plant metagenome

text: Leaf samples

text: Plant sample from virus


text: Iowa state university

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: havva ilbagi

text: virus

text: iowa

text: USA:Iowa

text: plant metagenome

text: Leaf samples

text: Plant sample from virus


text: Iowa state university

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

text: havva ilbagi

text: virus

text: USA:Iowa

text: plant metagenome

text: Leaf samples

text: Plant sample from virus


Johnsongrass 2

text: Iowa state university

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: havva ilbagi

text: virus

text: Tekirdag

text: Turkey:Tekirdag

text: plant metagenome

text: Leaf samples

text: Plant sample from virus


Volunteer wheat

text: Iowa state university

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: havva ilbagi

text: virus

text: Kirklareli

text: Turkey:Kirklareli

text: plant metagenome

text: Leaf samples

text: Plant sample from virus


rice

text: Iowa state university

text: live

text: Metagenome or environmental

text: havva ilbagi

text: virus

text: Edirne

text: Turkey:Edirne

text: plant metagenome

text: Leaf samples

text: Plant sample from virus


text: Anhui University

text: live

text: Microbe, viral or environmental

text: Shaoxing Chen

characteristic: collected by

characteristic: collection date

text: China: Yunnan

characteristic: geo loc name

text: Salt mine

characteristic: isolation source

text: 26.49 N 99.27 E

characteristic: lat lon

text: Halorhabdus amylolytica

text: strain

characteristic: sample type

characteristic: strain

text: Microbe sample from Halorhabdus sp.H27

text: type strain of Halorhabdus amylolytica

characteristic: type-material


Ryegrass

characteristic: External Id

text: Iowa state university

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Metagenome or environmental

characteristic: age

text: havva ilbagi

text: virus

characteristic: disease

text: Tekirdag

characteristic: ecotype

text: Turkey:Tekirdag

text: plant metagenome

text: Leaf samples

characteristic: tissue

text: Plant sample from virus


common reed1

text: Iowa state university

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: havva ilbagi

text: virus

text: Tekirdag

text: Turkey:Tekirdag

characteristic: isolate

text: plant metagenome

characteristic: organism

text: Leaf samples

text: Plant sample from virus

characteristic: title


Johnsongrass 3

text: Iowa state university

text: live

text: Metagenome or environmental

text: havva ilbagi

text: virus

text: Edirne

text: Turkey:Edirne

text: plant metagenome

text: Leaf samples

text: Plant sample from virus


text: University College London

text: live

text: Model organism or animal

text: adult

text: adult

characteristic: dev stage

characteristic: individual

text: Poecilia picta

text: female

characteristic: sex

text: head

text: Model organism or animal sample from Poecilia picta


characteristic: External Id

text: University College London

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Model organism or animal

text: adult

text: adult

text: Poecilia picta

text: male

text: head


text: University College London

characteristic: INSDC last update

text: live

text: Model organism or animal

text: adult

characteristic: age

text: adult

text: Poecilia picta

text: female

text: tail


text: University College London

text: live

text: Model organism or animal

text: adult

text: adult

text: Poecilia picta

text: male

text: tail

characteristic: tissue


text: Huazhong Agricultural University

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Not Available

text: Not Available

text: Not Available

text: China: Henan

text: PMID: 28686503

text: 33.23 N 113.21 E

text: Escherichia coli

text: Not Available

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli


Brevibacterium frigoritolerans

text: NANJING TECH UNIVERSITY

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: collection date

text: China:Xinjiang

characteristic: geo loc name

text: Peribacillus frigoritolerans

text: cell culture

characteristic: sample type

text: Microbe sample from [Brevibacterium] frigoritolerans


text: Nanjing Agricultural University

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: China

text: soil

characteristic: isolation source

text: Sphingomonas flavalba

characteristic: organism

text: cell culture

text: Microbe sample from Sphingomonas flavalba

characteristic: title

text: type material of Sphingomonas flavalba

characteristic: type material


Hulun Lake

characteristic: External Id

text: China Institute of Water Resources and Hydropower Research

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: China

text: lake water

characteristic: host

text: 49.29 N 117.62 E

text: lake water metagenome

text: Microorganisms from lake water


text: School of Life Sciences, University of Science and Technology of China

characteristic: INSDC last update

text: live

text: Generic

characteristic: SRA accession

text: 4-week adult plant

characteristic: developmental stage

characteristic: genotype beckground

text: Arabidopsis thaliana

text: 4-week adult plant

text: shoot apexes

characteristic: tissue

text: WUS-GR MOCK 2 small RNA-seq


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: 4-week adult plant

text: Arabidopsis thaliana

text: 4-week adult plant

text: shoot apexes

text: WUS-GR MOCK 1 small RNA-seq


text: live

text: Generic

characteristic: NCBI submission package

text: 4-week adult plant

text: Arabidopsis thaliana

text: 4-week adult plant

text: shoot apexes

text: WUS-GR DEX2 small RNA-seq


text: live

text: Generic

text: 4-week adult plant

text: Arabidopsis thaliana

text: 4-week adult plant

text: shoot apexes

text: WUS-GR DEX1 small RNA-seq


text: clinical/research| human

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

text: live

text: Pathogen.cl

characteristic: ProjectAccession

characteristic: PublicAccession

text: clinical/host-associated

text: North Carolina State University | College of Veterinary Medicine | Thakur Molecular Epidemiology Laboratory

characteristic: collected by

characteristic: collection date

text: Salmonella

characteristic: genus

text: USA:NC

characteristic: geo loc name

text: Homo sapiens

text: stool

characteristic: isolation source

characteristic: ontological term

text: Salmonella enterica

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: human

characteristic: source type

text: enterica

characteristic: species

characteristic: strain

text: Pathogen: clinical or host-associated sample from Salmonella enterica


characteristic: External Id

text: Hubbard Center for Genome Studies

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: SRA accession

text: USA: Sedona, AZ, Red Rock State Park

text: clay Soil

text: Bacillus sp. AZ43

characteristic: organism

text: Cell culture

characteristic: sample type

text: Microbe sample from Bacillus sp. AZ43

characteristic: title


text: Hubbard Center for Genome Studies

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: India: Perambalur, Tamil Nadu, Stone Temple

characteristic: geo loc name

text: granite building material

characteristic: isolation source

text: Mycobacterium sp. PS03-16

text: Cell culture

text: Microbe sample from Mycobacterium sp. PS03-16