text: environmental

characteristic: IFSAC+ Category

text: live

characteristic: ProjectAccession

text: environmental/food/other

text: Thakur Lab_NC State_CVM

text: Salmonella

text: USA:NC

text: environment

text: environmental system:ENVO_01000254

text: Salmonella enterica

characteristic: organism

text: environmental

text: enterica

characteristic: title


status: PUBLIC

characteristic: External Id

text: clinical/research

tag: attribute

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: North Carolina State University | College of Veterinary Medicine | Thakur Molecular Epidemiology Laboratory

characteristic: collected by

characteristic: collection date

text: Salmonella

characteristic: genus

text: USA:NC

characteristic: geo loc name

text: feces

characteristic: isolation source

characteristic: ontological term

text: Salmonella enterica

text: enterica

characteristic: species

characteristic: strain

text: Pathogen: environmental/food/other sample from Salmonella enterica


text: environmental

characteristic: IFSAC+ Category

text: live

characteristic: ProjectAccession

text: environmental/food/other

text: Salmonella

text: USA:NC

text: environment

text: environmental system:ENVO_01000254

text: Salmonella enterica

characteristic: organism

text: environmental

characteristic: source type

text: enterica

characteristic: title


characteristic: External Id

text: chicken

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: environmental/food/other

text: UNIETAR

text: Salmonella

text: Ecuador

text: chicken skin chiller

text: Salmonella enterica

text: food

text: enterica


text: environmental

text: live

characteristic: INSDC status

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

characteristic: collected by

characteristic: collection date

text: Salmonella

text: USA:NC

text: lagoon

text: Salmonella enterica

text: environmental

text: enterica


text: veterinary clinical/research, cow

text: live

text: environmental/food/other

text: Ohio ADDL

characteristic: fda lab id

text: Salmonella

characteristic: genus

text: USA:OH

characteristic: geo loc name

text: Pooled Tissue (Bos taurus)

characteristic: isolation source

text: bos taurus:NCBITAXON_9913, pooled sample:NCIT_C45910, tissue:UBERON_0000479

characteristic: ontological term

text: Salmonella enterica

text: animal

text: enterica

characteristic: species


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Blood

characteristic: body site

text: HMB-PUB

text: No

characteristic: is tumor

text: Homo sapiens

characteristic: organism

text: male

characteristic: sex

text: Case Set

characteristic: study design

text: Multiple Myeloma

characteristic: study disease

text: African American Multiple Myeloma GWAS

characteristic: study name

text: Yes

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Non-tumor DNA sample from Blood of a human male participant in the dbGaP study African American Multiple Myeloma GWAS

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: DNA

text: Blood

text: DS-CA-PUB

text: No

text: Homo sapiens

text: male

text: Case Set

text: Multiple Myeloma

text: African American Multiple Myeloma GWAS

text: Yes


text: Guizhou University

text: live

text: Invertebrate

characteristic: NCBI submission package

text: Healthy bean plants,C_FMS11

characteristic: host

text: Control group, the female adults of first generation,C_FMS11

characteristic: isolate

text: Frankliniella occidentalis

characteristic: tissue

text: Invertebrate sample from Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: Healthy bean plants,C_FMS12

text: Control group, the female adults of first generation,C_FMS12

text: Frankliniella occidentalis

characteristic: organism


text: Guizhou University

text: live

text: Invertebrate

text: Healthy bean plants,C_FMS13

text: Control group, the female adults of first generation,C_FMS13

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: Healthy bean plants,C_FMS14

text: Control group, the female adults of first generation,C_FMS14

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: Healthy bean plants,C_FMS71

text: Control group, the female adults of seventh generation,C_FMS71

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: Healthy bean plants,C_FMS72

text: Control group, the female adults of seventh generation,C_FMS72

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: Healthy bean plants,C_FMS73

text: Control group, the female adults of seventh generation,C_FMS73

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: Healthy bean plants,C_FMS74

text: Control group, the female adults of seventh generation,C_FMS74

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: Healthy bean plants,C_L1S11

text: Control group, the first instar larvaes of first generation,C_L1S11

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: Healthy bean plants,C_L1S12

text: Control group, the first instar larvaes of first generation,C_L1S12

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: Healthy bean plants,C_L1S13

text: Control group, the first instar larvaes of first generation,C_L1S13

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: Healthy bean plants,C_L1S71

text: Control group, the first instar larvaes of seventh generation,C_L1S71

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: Healthy bean plants,C_L1S72

text: Control group, the first instar larvaes of seventh generation,C_L1S72

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: Healthy bean plants,C_L1S73

text: Control group, the first instar larvaes of seventh generation,C_L1S73

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: Healthy bean plants,C_L1S74

text: Control group, the first instar larvaes of seventh generation,C_L1S74

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: Healthy bean plants,C_L2S11

text: Control group, the second instar larvaes of first generation,C_L2S11

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: Healthy bean plants,C_L2S12

text: Control group, the second instar larvaes of first generation,C_L2S12

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: Healthy bean plants,C_L2S13

text: Control group, the second instar larvaes of first generation,C_L2S13

text: Frankliniella occidentalis

text: Invertebrate sample from Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: Healthy bean plants,C_L2S14

text: Control group, the second instar larvaes of first generation,C_L2S14

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: Healthy bean plants,C_L2S71

text: Control group, the second instar larvaes of seventh generation,C_L2S71

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: Healthy bean plants,C_L2S72

text: Control group, the second instar larvaes of seventh generation,C_L2S72

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: Healthy bean plants,C_L2S73

text: Control group, the second instar larvaes of seventh generation,C_L2S73

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: Healthy bean plants,C_L2S74

text: Control group, the second instar larvaes of seventh generation,C_L2S74

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: bean pods,O_FM1

text: Original group,the female adults,O_FM1

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: bean pods,O_FM2

text: Original group,the female adults,O_FM2

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: bean pods,O_FM3

text: Original group,the female adults,O_FM3

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: bean pods,O_FM4

text: Original group,the female adults,O_FM4

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: bean pods,O_L11

text: Original group,the first instar larvaes,O_L11

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: bean pods,O_L12

text: Original group,the first instar larvaes,O_L12

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: bean pods,O_L13

text: Original group,the first instar larvaes,O_L13

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: bean pods,O_L14

text: Original group,the first instar larvaes,O_L14

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: bean pods,O_L21

text: Original group,the second instar larvaes,O_L21

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: bean pods,O_L22

text: Original group,the second instar larvaes,O_L22

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: bean pods,O_L23

text: Original group,the second instar larvaes,O_L23

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: bean pods,O_L24

text: Original group,the second instar larvaes,O_L24

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: induced bean by T. urticae infection,T_FMS11

text: treatment group,the female adults of first generation,T_FMS11

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: induced bean by T. urticae infection,T_FMS12

text: treatment group,the female adults of first generation,T_FMS12

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: induced bean by T. urticae infection,T_FMS13

text: treatment group,the female adults of first generation,T_FMS13

text: Frankliniella occidentalis

text: Invertebrate sample from Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: induced bean by T. urticae infection,T_FMS14

text: treatment group,the female adults of first generation,T_FMS14

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: induced bean by T. urticae infection,T_FMS71

text: treatment group,the female adults of seventh generation,T_FMS71

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: induced bean by T. urticae infection,T_FMS72

text: treatment group,the female adults of seventh generation,T_FMS72

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: induced bean by T. urticae infection,T_FMS73

text: treatment group,the female adults of seventh generation,T_FMS73

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: induced bean by T. urticae infection,T_FMS74

text: treatment group,the female adults of seventh generation,T_FMS74

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: induced bean by T. urticae infection,T_L2S11

text: treatment group,the second instar larvaes of first generation,T_L2S11

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: induced bean by T. urticae infection,T_L2S12

text: treatment group,the second instar larvaes of first generation,T_L2S12

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: induced bean by T. urticae infection,T_L2S13

text: treatment group,the second instar larvaes of first generation,T_L2S13

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: induced bean by T. urticae infection,T_L2S14

text: treatment group,the second instar larvaes of first generation,T_L2S14

text: Frankliniella occidentalis

text: Invertebrate sample from Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: induced bean by T. urticae infection,T_L2S71

text: treatment group,the second instar larvaes of seventh generation,T_L2S71

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: induced bean by T. urticae infection,T_L2S72

text: treatment group,the second instar larvaes of seventh generation,T_L2S72

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: induced bean by T. urticae infection,T_L2S73

text: treatment group,the second instar larvaes of seventh generation,T_L2S73

text: Frankliniella occidentalis


text: Guizhou University

text: live

text: Invertebrate

text: induced bean by T. urticae infection,T_L2S74

text: treatment group,the second instar larvaes of seventh generation,T_L2S74

text: Frankliniella occidentalis


text: Seoul National University

text: live

text: Microbe, viral or environmental

text: South Korea: Yeoncheon-gun, Gyeonggi-do

text: broken rice

text: Burkholderia glumae

text: cell

characteristic: strain

text: Microbe sample from Burkholderia glumae


text: Curtin University

text: live

text: MIGS.eu

text: MIGS/MIMS/MIMARKS.plant-associated

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Plant diseases

characteristic: env biome

text: Crop

characteristic: env feature

text: Leaf

characteristic: estimated size

text: Tunisia

characteristic: geo loc name

text: Triticum aestivum

text: Single spore culture

text: 33.88 N 9.53 E

characteristic: lat lon

text: single

text: Pyrenophora tritici-repentis

text: haploid

characteristic: ploidy

text: asexual/sexual

characteristic: propagation


characteristic: External Id

text: Jilin Agricultural University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: China

text: Auricularia cornea

text: Monokaryon

text: Microbe sample from Auricularia cornea

characteristic: title


text: Kuwait Institute for Scientific Research

text: live

text: Plant

characteristic: NCBI submission model

characteristic: NCBI submission package

text: mature

text: Kuwait

characteristic: isolate

text: 29.64798 N 47.99595 E

text: Haloxylon salicornicum

characteristic: organism

text: leaf

characteristic: tissue

text: DNA sample from Haloxylon salicornicum


text: Jilin Agricultural University

text: live

text: Microbe, viral or environmental

text: China: Xinjiang

text: culture

text: Pleurotus tuoliensis

text: tissue sample

characteristic: strain

text: Microbe sample from Pleurotus tuoliensis


text: Universidade Federal do Rio de Janeiro

characteristic: INSDC secondary accession

text: live

characteristic: SRA accession

text: Andrea de Andrade Rangel de Freitas

characteristic: collected by

characteristic: collection date

text: Brazil: Rio de Janeiro

text: Coragyps atratus

characteristic: host

text: cloacal

characteristic: isolation source

text: 22.90278 S 43.2075 W

text: Enterococcus faecalis

text: Enterococcus faecalis Ca-2 isolated from American Black Vulture


characteristic: External Id

text: Universidade Federal do Rio de Janeiro

characteristic: INSDC center name

text: live

text: Andrea de Andrade Rangel de Freitas

text: Brazil: Rio de Janeiro

characteristic: geo loc name

text: Coragyps atratus

text: cloacal

text: 22.90278 S 43.2075 W

characteristic: lat lon

text: Enterococcus faecalis

text: Enterococcus faecalis Ca-18 isolated from American Black Vulture


text: Sichuan Agricultural University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Plant

characteristic: cultivar

text: The maize drought tolerance inbred line AC7643 under well water condition (WW).

characteristic: description

text: three-leaf-stage

characteristic: dev stage

text: China

text: Zea mays

characteristic: sample type

text: Root

characteristic: title

text: Not stressed

characteristic: treatment


text: Sichuan Agricultural University

text: live

text: Plant

characteristic: NCBI submission model

characteristic: NCBI submission package

text: The maize drought tolerance inbred line AC7643 under drought-stressed condition (WS).

text: three-leaf-stage

text: China

text: Zea mays

characteristic: organism

text: Root

characteristic: tissue

text: Drought-stressed


characteristic: External Id

text: Sichuan Agricultural University

text: live

text: Plant

text: The maize sensitive inbred line AC7729/TZSRW under well water condition (WW).

text: three-leaf-stage

text: China

text: Zea mays

text: Root

text: Not stressed


text: Sichuan Agricultural University

characteristic: INSDC center name

text: live

text: Plant

text: The maize sensitive inbred line AC7729/TZSRW under drought-stressed condition (WS).

text: three-leaf-stage

text: China

text: Zea mays

text: Root

text: Drought-stressed


text: Sichuan Agricultural University

characteristic: INSDC secondary accession

text: live

text: Plant

characteristic: SRA accession

text: Recombinant inbred lines RIL126 under well water condition (WW).

text: three-leaf-stage

text: China

characteristic: geo loc name

text: Zea mays

text: Root

text: Not stressed


text: Sichuan Agricultural University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Plant

text: Recombinant inbred lines RIL126 under drought-stressed condition (WS).

text: three-leaf-stage

text: China

text: Zea mays

text: Root

text: Drought-stressed


text: Sichuan Agricultural University

text: live

characteristic: INSDC status

text: Plant

characteristic: cultivar

text: Recombinant inbred lines RIL131 under well water condition (WW).

text: three-leaf-stage

text: China

text: Zea mays

text: Root

text: Not stressed


text: Sichuan Agricultural University

text: live

text: Plant

text: Recombinant inbred lines RIL131 under drought-stressed condition (WS).

characteristic: description

text: three-leaf-stage

characteristic: dev stage

text: China

text: Zea mays

text: Root

text: Drought-stressed


text: Sichuan Agricultural University

text: live

text: Plant

text: Recombinant inbred lines RIL142 under well water condition (WW).

text: three-leaf-stage

text: China

text: Zea mays

characteristic: sample type

text: Root

characteristic: title

text: Not stressed


text: Sichuan Agricultural University

text: live

text: Plant

characteristic: NCBI submission model

text: Recombinant inbred lines RIL142 under drought-stressed condition (WS).

text: three-leaf-stage

text: China

text: Zea mays

text: Root

text: Drought-stressed

characteristic: treatment


text: Sichuan Agricultural University

text: live

text: Plant

characteristic: NCBI submission package

text: Recombinant inbred lines RIL155 under well water condition (WW).

text: three-leaf-stage

text: China

text: Zea mays

characteristic: organism

text: Root

text: Not stressed


characteristic: External Id

text: Sichuan Agricultural University

text: live

text: Plant

text: Recombinant inbred lines RIL155 under drought-stressed condition (WS).

text: three-leaf-stage

text: China

text: Zea mays

text: Root

characteristic: tissue

text: Drought-stressed


text: Sichuan Agricultural University

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Plant

text: Recombinant inbred lines RIL165 under well water condition (WW).

text: three-leaf-stage

text: China

text: Zea mays

text: Root

text: Not stressed


text: Sichuan Agricultural University

text: live

text: Plant

characteristic: SRA accession

text: Recombinant inbred lines RIL165 under drought-stressed condition (WS).

text: three-leaf-stage

text: China

characteristic: geo loc name

text: Zea mays

text: Root

text: Drought-stressed


text: Sichuan Agricultural University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Plant

text: Recombinant inbred lines RIL166 under well water condition (WW).

text: three-leaf-stage

text: China

text: Zea mays

text: Root

text: Not stressed


text: Sichuan Agricultural University

text: live

characteristic: INSDC status

text: Plant

characteristic: cultivar

text: Recombinant inbred lines RIL166 under drought-stressed condition (WS).

text: three-leaf-stage

text: China

text: Zea mays

text: Root

text: Drought-stressed


text: Sichuan Agricultural University

text: live

text: Plant

text: Recombinant inbred lines RIL203 under well water condition (WW).

characteristic: description

text: three-leaf-stage

characteristic: dev stage

text: China

text: Zea mays

text: Root

text: Not stressed


text: Sichuan Agricultural University

text: live

text: Plant

text: Recombinant inbred lines RIL203 under drought-stressed condition (WS).

text: three-leaf-stage

text: China

text: Zea mays

characteristic: sample type

text: Root

characteristic: title

text: Drought-stressed


text: Sichuan Agricultural University

text: live

text: Plant

characteristic: NCBI submission model

text: Recombinant inbred lines RIL208 under well water condition (WW).

text: three-leaf-stage

text: China

text: Zea mays

text: Root

text: Not stressed

characteristic: treatment


text: Sichuan Agricultural University

text: live

text: Plant

characteristic: NCBI submission package

text: Recombinant inbred lines RIL208 under drought-stressed condition (WS).

text: three-leaf-stage

text: China

text: Zea mays

characteristic: organism

text: Root

text: Drought-stressed


characteristic: External Id

text: Sichuan Agricultural University

text: live

text: Plant

text: Recombinant inbred lines RIL226 under well water condition (WW).

text: three-leaf-stage

text: China

text: Zea mays

text: Root

characteristic: tissue

text: Not stressed


text: Sichuan Agricultural University

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Plant

text: Recombinant inbred lines RIL226 under drought-stressed condition (WS).

text: three-leaf-stage

text: China

text: Zea mays

text: Root

text: Drought-stressed


text: Sichuan Agricultural University

text: live

text: Plant

characteristic: SRA accession

text: Recombinant inbred lines RIL231 under well water condition (WW).

text: three-leaf-stage

text: China

characteristic: geo loc name

text: Zea mays

text: Root

text: Not stressed


text: Sichuan Agricultural University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Plant

text: Recombinant inbred lines RIL231 under drought-stressed condition (WS).

text: three-leaf-stage

text: China

text: Zea mays

text: Root

text: Drought-stressed


text: Sichuan Agricultural University

text: live

characteristic: INSDC status

text: Plant

characteristic: cultivar

text: Recombinant inbred lines RIL27 under well water condition (WW).

text: three-leaf-stage

text: China

text: Zea mays

text: Root

text: Not stressed


text: Sichuan Agricultural University

text: live

text: Plant

text: Recombinant inbred lines RIL27 under drought-stressed condition (WS).

characteristic: description

text: three-leaf-stage

characteristic: dev stage

text: China

text: Zea mays

text: Root

text: Drought-stressed


text: Sichuan Agricultural University

text: live

text: Plant

text: Recombinant inbred lines RIL47 under well water condition (WW).

text: three-leaf-stage

text: China

text: Zea mays

characteristic: sample type

text: Root

characteristic: title

text: Not stressed


text: Sichuan Agricultural University

text: live

text: Plant

characteristic: NCBI submission model

text: Recombinant inbred lines RIL47 under drought-stressed condition (WS).

text: three-leaf-stage

text: China

text: Zea mays

text: Root

text: Drought-stressed

characteristic: treatment


text: Sichuan Agricultural University

text: live

text: Plant

characteristic: NCBI submission package

text: Recombinant inbred lines RIL64 under well water condition (WW).

text: three-leaf-stage

text: China

text: Zea mays

characteristic: organism

text: Root

text: Not stressed


characteristic: External Id

text: Sichuan Agricultural University

text: live

text: Plant

text: Recombinant inbred lines RIL64 under drought-stressed condition (WS).

text: three-leaf-stage

text: China

text: Zea mays

text: Root

characteristic: tissue

text: Drought-stressed


text: Sichuan Agricultural University

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Plant

text: Recombinant inbred lines RIL8 under well water condition (WW).

text: three-leaf-stage

text: China

text: Zea mays

text: Root

text: Not stressed


text: Sichuan Agricultural University

text: live

text: Plant

characteristic: SRA accession

text: Recombinant inbred lines RIL8 under drought-stressed condition (WS).

text: three-leaf-stage

text: China

characteristic: geo loc name

text: Zea mays

text: Root

text: Drought-stressed


text: Deparment of Surgery, University of Southern California

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: n/a (buffer only)

characteristic: biopsy source tissue

text: Homo sapiens

text: PBS processed with ANGLE Parsortix and subjected to RNA amplification/libarary prep


text: Seoul National University

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: South Korea: Icheon, Gyeonggi province

text: broken rice

text: Burkholderia glumae

text: bacterial cell

characteristic: strain

text: Microbe sample from Burkholderia glumae


text: Seoul National University

text: live

text: Microbe, viral or environmental

text: South Korea: Sancheong district, Gyeongsang province

text: broken rice

text: Burkholderia glumae

text: bacterial cell

text: Microbe sample from Burkholderia glumae


text: Seoul National University

text: live

text: Microbe, viral or environmental

text: South Korea: Changwon, Gyeongsang province

text: diseased rice

text: Burkholderia glumae

text: bacterial cell

text: Microbe sample from Burkholderia glumae


text: Seoul National University

text: live

text: Microbe, viral or environmental

text: South Korea: Cheongju, Chungcheong province

text: diseased rice

text: Burkholderia glumae

text: bacterial cell

text: Microbe sample from Burkholderia glumae


text: Seoul National University

text: live

text: Microbe, viral or environmental

text: South Korea: Gangjin district, Jeolla province

text: diseased rice

text: Burkholderia glumae

text: bacterial cell

text: Microbe sample from Burkholderia glumae


text: Seoul National University

text: live

text: Microbe, viral or environmental

text: South Korea: Suwon, Gyeonggi province

text: diseased rice

text: Burkholderia glumae

text: bacterial cell

text: Microbe sample from Burkholderia glumae


text: FDA Center for Food Safety and Applied Nutrition

text: live

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: FDA

characteristic: collected by

characteristic: collection date

characteristic: fda lab id

text: Listeria

characteristic: genus

text: USA:CT

text: Spicy Sprout Blend

characteristic: isolation source

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: project name

text: United States Food and Drug Administration|Office of Regulatory Affairs|Northeast Food and Feed Laboratory

characteristic: sequenced by

text: monocytogenes

characteristic: species

text: Pathogen: environmental/food/other sample from Listeria monocytogenes


characteristic: External Id

text: veterinary clinical/research| other animal

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

characteristic: SRA accession

text: environmental/food/other

text: North Carolina

text: Salmonella

text: USA:NC

text: feces equine

text: Salmonella enterica

characteristic: organism

text: animal

characteristic: source type

text: enterica

text: Pathogen: environmental/food/other sample from Salmonella enterica

characteristic: title


text: veterinary clinical/research| pig

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: Minnesota Veterinary Diagnostic Lab

text: Salmonella

text: USA:MN

characteristic: geo loc name

text: tissue pool (porcine)

text: tissue:UBERON_0000479, pool water:GENEPIO_0001014, swine:FOODON_03411136

characteristic: ontological term

text: Salmonella enterica

text: animal

text: enterica

characteristic: strain


text: veterinary clinical/research| pig

text: live

text: environmental/food/other

text: Minnesota Veterinary Diagnostic Lab

characteristic: collected by

characteristic: collection date

text: Salmonella

characteristic: genus

text: USA:MN

text: intestine (Porcine)

characteristic: isolation source

text: intestine:UBERON_0000160, swine:FOODON_03411136

text: Salmonella enterica

text: animal

text: enterica

characteristic: species


characteristic: External Id

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

characteristic: SRA accession

text: environmental/food/other

text: North Carolina

text: Salmonella

text: USA:NC

text: blood equine

text: Salmonella enterica

text: animal

text: enterica


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: environmental/food/other

text: North Carolina

text: Salmonella

text: USA:NC

text: feces (Caprine)

text: feces:UBERON_0001988, goat:FOODON_03411328

text: Salmonella enterica

characteristic: organism

text: animal

characteristic: source type

text: enterica

characteristic: title


text: veterinary clinical/research, wild animal

text: live

characteristic: INSDC status

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: OADDL - OK

text: Salmonella

text: USA:OK

characteristic: geo loc name

text: Reptile Esophageal Swab

text: reptile:FOODON_03411625, swab:NCIT_C17627

characteristic: ontological term

text: Salmonella enterica

text: animal

text: enterica


text: veterinary clinical/research| cow

text: live

text: environmental/food/other

text: OADDL - OK

characteristic: collected by

characteristic: collection date

text: Salmonella

characteristic: genus

text: USA:OK

text: Intestines (Bovine)

characteristic: isolation source

text: intestine:UBERON_0000160, bovine:FOODON_03414374

text: Salmonella enterica

text: animal

text: enterica

characteristic: strain


characteristic: External Id

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: environmental/food/other

text: OADDL - OK

text: Salmonella

text: USA:OK

text: equine stall gauze

text: Salmonella enterica

text: animal

text: enterica

characteristic: species


text: veterinary clinical/research| cow

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: SRA accession

text: environmental/food/other

text: OADDL - OK

text: Salmonella

text: USA:OK

text: Feces (Bovine)

text: bos taurus:NCBITAXON_9913, feces:UBERON_0001988

text: Salmonella enterica

characteristic: organism

text: animal

characteristic: source type

text: enterica


text: FDA Contracted Laboratory

characteristic: Collected by

text: pork

characteristic: IFSAC Category

text: live

characteristic: INSDC status

characteristic: Isolate name alias

characteristic: PublicAccession

characteristic: Strain

text: Salmonella

text: USA:NE

characteristic: geo loc name

text: meat pork

text: pork meat food product:FOODON_00001038

text: Salmonella enterica

text: food

text: enterica

characteristic: title


text: FDA Contracted Laboratory

characteristic: External Id

text: animal feed

characteristic: IFSAC+ category

text: live

characteristic: ProjectAccession

text: environmental/food/other

characteristic: collection date

text: Salmonella

characteristic: genus

text: USA:CA

text: finished pet food

characteristic: isolation source

text: pet food:foodon_00002682

characteristic: ontological term

text: Salmonella enterica

text: enterica


text: FDA Contracted Laboratory

text: beef

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: SRA accession

text: Salmonella

text: USA:WI

text: ground beef

text: ground beef food product:FOODON_00001282

text: Salmonella enterica

characteristic: organism

text: food

text: enterica

characteristic: species


text: FDA Contracted Laboratory

characteristic: Collected by

text: environmental

text: live

characteristic: INSDC status

characteristic: Isolate name alias

characteristic: PublicAccession

characteristic: Strain

text: environmental/food/other

text: Salmonella

text: USA:MO

characteristic: geo loc name

text: environmental swab

text: environmental (swab or sampling):GENEPIO_0001732

text: Salmonella enterica

text: environmental

characteristic: source type

text: enterica


text: FDA Contracted Laboratory

characteristic: External Id

text: meat

text: live

characteristic: ProjectAccession

text: environmental/food/other

characteristic: collection date

text: Salmonella

characteristic: genus

text: USA:CA

text: Carcass Swab

characteristic: isolation source

text: carcass:UBERON_0008979, swab:NCIT_C17627

text: Salmonella enterica

text: animal

text: enterica

characteristic: title


text: FDA Contracted Laboratory

text: animal feed

characteristic: IFSAC+ category

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: environmental/food/other

text: Salmonella

text: USA:IL

text: finished product pet food

text: pet food:foodon_00002682

characteristic: ontological term

text: Salmonella enterica

text: enterica


text: FDA Contracted Laboratory

characteristic: Collected by

text: multi-ingredient

characteristic: IFSAC Category

text: live

characteristic: INSDC status

text: Salmonella

text: USA:AZ

text: raw product

text: food (raw):FOODON_03311126

text: Salmonella enterica

characteristic: organism

text: food

text: enterica

characteristic: species


text: environmental

characteristic: IFSAC+ Category

characteristic: INSDC secondary accession

text: live

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: North Carolina State University | College of Veterinary Medicine | Thakur Molecular Epidemiology Laboratory

characteristic: collected by

text: Escherichia

text: USA:NC

characteristic: geo loc name

text: environment

text: environmental system:ENVO_01000254

text: Escherichia coli

text: environmental

characteristic: source type

text: coli

characteristic: strain

text: Pathogen: environmental/food/other sample from Escherichia coli


characteristic: External Id

text: environmental

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC center name

text: live

characteristic: ProjectAccession

text: environmental/food/other

text: Thakur Lab_NC State_CVM

characteristic: collection date

text: Escherichia

characteristic: genus

text: USA:NC

text: environment

characteristic: isolation source

text: environmental system:ENVO_01000254

text: Escherichia coli

text: environmental

text: coli

characteristic: title


text: veterinary clinical/research, chicken

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: environmental/food/other

text: UNIETAR

text: Salmonella

text: Ecuador

text: Skin before chiller (Gallus gallus domesticus)

text: chicken:FOODON_03411457, zone of skin:UBERON_0000014

characteristic: ontological term

text: Salmonella enterica

characteristic: organism

text: animal

text: enterica


Shewanella sp. R106

text: Korea Polar Research Institute

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: Antarctica: Ross Sea

text: surface deep-sea sediments

text: Shewanella psychromarinicola

text: cell culture

characteristic: sample type

text: Microbe sample from Shewanella psychromarinicola


Shewanella sp. M2

text: Korea Polar Research Institute

text: live

text: Microbe, viral or environmental

text: Antarctica:Ross Sea

characteristic: geo loc name

text: Antarctica: surface deep-sea sediments in the Ross Sea

text: Shewanella psychromarinicola

text: cell culture

text: type strain of Shewanella psychromarinicola

characteristic: type material


anammox granular sludge

text: Zhejiang University

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.wastewater

characteristic: NCBI submission package

text: anammox granular sludge metagenome

characteristic: description

text: anammox reactor

text: reactor

text: water

text: China

text: 30.30 N 120.09 E

text: sludge metagenome

text: de novo

text: anaerobe

text: Hiseq 150-PE

text: no

text: MIMS Environmental/Metagenome sample from anammox granular sludge metagenome


Ma

characteristic: External Id

text: South China Agricultural University

characteristic: INSDC center name

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: blood

text: warm season

text: blood vasculature

text: China: Guangzhou

text: Non-human Primate

characteristic: host

text: 23.20 N 113.30 E

text: metagenome

text: Ma


Pa

text: South China Agricultural University

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: blood

text: warm season

text: blood vasculature

text: China: Guangzhou

text: Non-human primate

text: 23.20 N 113.30 E

text: metagenome

text: Pa


Fetus

text: South China Agricultural University

text: live

text: MIGS/MIMS/MIMARKS.human-associated

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Liver

text: warm season

text: liver

text: China: Guangzhou

text: Non-human primate

text: 23.20 N 113.30 E

text: metagenome

text: Fetus


text: Stellenbosch University

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

characteristic: collection date

text: South Africa: Northen Cape

text: Acacia

text: Decaying wood

text: Coniochaeta pulveracea

text: cell culture

characteristic: strain

text: RNA-seq sample from Coniochaeta pulveracea with glucose as sole carbon source


text: Stellenbosch University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: South Africa: Northen Cape

text: Acacia

text: Decaying wood

characteristic: isolation source

text: Coniochaeta pulveracea

text: cell culture

text: RNA-seq sample from Coniochaeta pulveracea with Acacia as sole carbon source

characteristic: title


Planomicrobium koreense

text: institute of microbial technology

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: korea

text: seafood

text: Planococcus koreensis

characteristic: organism

text: whole organism

text: JCM 10704

text: Microbe sample from Planomicrobium koreense 10704

text: type strain of Planomicrobium koreense


WU_164 genomic DNA

text: Washington University School of Medicine

text: live

text: Pathogen.cl

text: Juan Calix

text: USA

text: Homo sapiens

text: UTI

text: urine

text: 38.6357 N 90.2648 W

text: Acinetobacter baumannii

text: Pathogen: clinical or host-associated sample from Acinetobacter baumannii


edible jellyfish Rhophilema esculentum

text: The Chinese University of Hong Kong

text: live

text: Invertebrate

text: Adult

characteristic: age

text: Hong Kong

characteristic: isolate

text: South China Sea

text: Rhopilema esculentum

text: whole body

characteristic: tissue

text: Invertebrate sample from Rhopilema esculentum


characteristic: External Id

text: Nanyang Technological University

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: Singapore

text: air

text: Enterobacter cloacae

text: bacterial isolate

text: Microbe sample from Enterobacter cloacae


Pkoreense

text: institute of microbial technology

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: South Korea

characteristic: geo loc name

text: seafood

text: Planococcus koreensis

text: whole organism

characteristic: sample type

text: Microbe sample from Planomicrobium koreense

text: type strain of Planomicrobium koreense

characteristic: type material


Heliconius charithonia

text: University of California- Irvine

characteristic: INSDC secondary accession

text: live

text: Invertebrate

characteristic: SRA accession

characteristic: collection date

text: Heliconius charithonia RefSeq Genome Project

characteristic: description

text: USA

text: Heliconius charithonia

text: pupae

text: Heliconius charithonia RefSeq Genome


text: FDA Contracted Laboratory

characteristic: Collected by

text: grains

characteristic: IFSAC Category

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: Isolate name alias

text: Pathogen.env

characteristic: PublicAccession

characteristic: Strain

text: Escherichia

characteristic: genus

text: USA:OH

text: flour

characteristic: isolation source

characteristic: ontological term

text: Escherichia coli

text: food

characteristic: source type

text: coli

characteristic: species

text: Pathogen: environmental/food/other sample from Escherichia coli

characteristic: title


Planctomycetes bacterium metabat2.867

characteristic: External Id

text: Radboud University Nijmegen

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: Alcohol cycling

characteristic: Potential metabolism

characteristic: environmental sample

text: USA: North Dakota, Cottonwood Lake Study Area

characteristic: geo loc name

characteristic: isolate

text: Prairie Pothole Region wetland sediments

text: sediment metagenome

characteristic: metagenome source

characteristic: metagenomic

text: This BioSample is a metagenomic assembly obtained from the sediment metagenome BioSample: SAMN10290962

characteristic: note

text: Planctomycetota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Planctomycetota bacterium


text: Pharmacology, University of Iowa

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Gestation Day 12.5

characteristic: age

text: Mus musculus

text: Placenta

characteristic: strain

characteristic: tissue

text: Sample 12_WT: Placenta from Rgs2-WT sire and wildtype dam


characteristic: External Id

text: Pharmacology, University of Iowa

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Gestation Day 12.5

text: Mus musculus

text: Placenta

text: Sample 11_WT: Placenta from Rgs2-WT sire and wildtype dam

characteristic: title


text: Pharmacology, University of Iowa

text: live

text: Generic

text: Gestation Day 12.5

text: Mus musculus

text: Placenta

text: Sample 10_WT: Placenta from Rgs2-WT sire and wildtype dam


text: Pharmacology, University of Iowa

text: live

text: Generic

text: Gestation Day 12.5

text: Mus musculus

text: Placenta

text: Sample 9_WT: Placenta from Rgs2-WT sire and wildtype dam


text: Pharmacology, University of Iowa

text: live

text: Generic

text: Gestation Day 12.5

text: Mus musculus

text: Placenta

text: Sample 8_WT: Placenta from Rgs2-WT sire and wildtype dam


text: Pharmacology, University of Iowa

text: live

text: Generic

text: Gestation Day 12.5

text: Mus musculus

text: Placenta

text: Sample 3_KO: Placenta from Rgs2-KO sire and wildtype dam


text: Pharmacology, University of Iowa

text: live

text: Generic

text: Gestation Day 12.5

text: Mus musculus

text: Placenta

text: Sample 7_WT: Placenta from Rgs2-WT sire and wildtype dam


text: Pharmacology, University of Iowa

text: live

text: Generic

text: Gestation Day 12.5

text: Mus musculus

text: Placenta

text: Sample 6_KO: Placenta from Rgs2-KO sire and wildtype dam


text: Pharmacology, University of Iowa

text: live

text: Generic

text: Gestation Day 12.5

text: Mus musculus

text: Placenta

text: Sample 5_KO: Placenta from Rgs2-KO sire and wildtype dam


text: Pharmacology, University of Iowa

text: live

text: Generic

text: Gestation Day 12.5

text: Mus musculus

text: Placenta

text: Sample 4_KO: Placenta from Rgs2-KO sire and wildtype dam


text: Pharmacology, University of Iowa

text: live

text: Generic

text: Gestation Day 12.5

text: Mus musculus

text: Placenta

text: Sample 2_KO: Placenta from Rgs2-KO sire and wildtype dam


text: Pharmacology, University of Iowa

text: live

text: Generic

text: Gestation Day 12.5

text: Mus musculus

text: Placenta

text: Sample 1_KO: Placenta from Rgs2-KO sire and wildtype dam


fish gut

text: College of Bio-systems Engineering and Food Science

text: live

text: Metagenome or environmental

text: China:Hangzhou

text: Oreochromis niloticus

characteristic: host

text: 30.18 N 120.05 E

text: fish gut metagenome

text: Metagenome or environmental sample from fish gut metagenome


fish gut metagenome

text: live

text: Model organism or animal

text: fingerling

text: Oreochromis niloticus

characteristic: isolate

text: fish gut metagenome

text: male

characteristic: sex

text: intestine

text: Model organism or animal sample from fish gut


fish gut 2017-12-30

text: live

text: Model organism or animal

text: flingerling

text: China:Hangzhou

text: tilapia gut

text: fish gut

text: 30.18 N 120.05 E

text: Oreochromis niloticus

characteristic: organism

text: male

text: intestine

text: gut from Model organism or animal sample


text: School of Agriculture and Biology, Shanghai Jiao Tong University

characteristic: INSDC first public

text: live

text: Generic

text: Fagopyrum tataricum

text: seeds

text: initial maturity stage

characteristic: stage

text: seeds


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Fagopyrum tataricum

text: seeds

text: discoloration stage

text: seeds


text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Fagopyrum tataricum

text: seeds

text: green fruit stage

text: seeds


text: CAS

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.host-associated

text: Keywords: GSC:MIxS;MIMS:6.0

characteristic: description

text: bee

text: insect metagenome

text: MIMS Environmental/Metagenome sample from insect metagenome


text: CAS

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: soil

text: soil metagenome

text: MIMS Environmental/Metagenome sample from soil metagenome


text: Department of General Surgery & Bio-Bank of General Surgery, The Fourth Aﬃliated Hospital of Harbin Medical University

text: live

text: Generic

text: epithelial cells

characteristic: cell type

text: Homo sapiens

text: colorectal carcinoma

text: treatment with RK

characteristic: treatment


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: epithelial cells

text: Homo sapiens

text: colorectal carcinoma

text: control


Paracoccus sp I-41R45

text: Universidad Andres Bello

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: collection date

text: Antarctica: Chile

characteristic: geo loc name

text: Notothenia coriiceps (black rock cod)

text: kidney

characteristic: isolation source

text: 62.410933 S 59.756750 W

characteristic: lat lon

text: Paracoccus nototheniae

text: pure culture

characteristic: sample type

characteristic: strain

text: Microbe sample from Paracoccus coriiceps sp I-41R45

text: type material of Paracoccus nototheniae

characteristic: type material


Lunularia cruciata (L.) Dum.

text: Fairylake Botanical Garden

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Plant

text: gametophyte

characteristic: dev stage

text: USA:Connecticut

characteristic: ecotype

text: USA:Connecticut

characteristic: isolate

text: Lunularia cruciata

characteristic: organism

text: male

characteristic: sex

text: Whole plant

characteristic: tissue

characteristic: title


characteristic: External Id

text: Genomics, IGTP

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: before glucocorticoid treatment

characteristic: collection time

text: Glucocorticoid non-responder

characteristic: corticosteroid response

text: UC

characteristic: disease state

characteristic: individual

text: Homo sapiens

text: plasma

text: male

text: plasma


text: Genomics, IGTP

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: before glucocorticoid treatment

text: Glucocorticoid responder

text: UC

text: Homo sapiens

text: plasma

characteristic: sample type

text: male

text: plasma


text: Genomics, IGTP

text: live

text: Generic

text: before glucocorticoid treatment

text: Glucocorticoid responder

text: UC

text: Homo sapiens

characteristic: organism

text: plasma

text: female

characteristic: sex

text: plasma


text: Genomics, IGTP

text: live

text: Generic

text: no IBD treatment

text: No IBD treatment

text: reference

text: Homo sapiens

text: plasma

text: female

text: plasma

characteristic: title


characteristic: External Id

text: Genomics, IGTP

text: live

text: Generic

text: no IBD treatment

text: No IBD treatment

text: reference

text: Homo sapiens

text: plasma

text: male

text: plasma


text: Genomics, IGTP

characteristic: INSDC center name

text: live

text: Generic

text: 3rd day after starting Glucocorticoid treatment

text: Glucocorticoid non-responder

text: UC

text: Homo sapiens

text: plasma

text: female

text: plasma


text: Genomics, IGTP

text: live

characteristic: INSDC status

text: Generic

text: Glucocorticoid non-responder

text: UC

text: Homo sapiens

text: plasma

text: male

text: plasma


text: Genomics, IGTP

text: live

text: Generic

characteristic: NCBI submission model

text: Glucocorticoid responder

text: UC

text: Homo sapiens

text: plasma

text: male

text: plasma


text: Genomics, IGTP

text: live

text: Generic

characteristic: NCBI submission package

text: Glucocorticoid responder

text: UC

text: Homo sapiens

text: plasma

text: female

text: plasma


text: Genomics, IGTP

text: live

text: Generic

characteristic: SRA accession

text: before glucocorticoid treatment

text: Glucocorticoid non-responder

text: UC

text: Homo sapiens

text: plasma

text: female

text: plasma


text: The Salk Institute for Biological Studies

text: live

text: Generic

characteristic: genotype/variation

text: Homo sapiens

text: R1159Q/+ hNPCs


text: live

text: Generic

text: Homo sapiens

text: K755R/+ hNPCs


text: live

text: Generic

text: wild type

text: Homo sapiens

text: hNPCs


text: live

text: Generic

text: SMARCA2 (Bethyl A301-015A)

characteristic: antibody

text: Homo sapiens

text: R1159Q/+ hNPCs


text: live

text: Generic

text: SMARCA2 (Bethyl A301-015A)

text: Homo sapiens

text: K755R/+ hNPCs


text: live

text: Generic

text: H3K27ac (Abcam ab4729)

text: Homo sapiens

text: R1159Q/+ hNPCs


text: live

text: Generic

text: H3K27me3 (Active Motif 39155)

text: Homo sapiens

text: R1159Q/+ hNPCs


text: live

text: Generic

text: H3K4me3 (Millipore 05-745)

text: Homo sapiens

text: R1159Q/+ hNPCs


text: live

text: Generic

text: H3K4me (Abcam ab8895)

text: Homo sapiens

text: R1159Q/+ hNPCs


text: live

text: Generic

text: H3K27ac (Abcam ab4729)

text: Homo sapiens

text: K755R/+ hNPCs


text: live

text: Generic

text: H3K27me3 (Active Motif 39155)

text: Homo sapiens

text: K755R/+ hNPCs


text: live

text: Generic

text: H3K4me3 (Millipore 05-745)

text: Homo sapiens

text: K755R/+ hNPCs


text: live

text: Generic

text: H3K4me (Abcam ab8895)

text: Homo sapiens

text: K755R/+ hNPCs


text: live

text: Generic

text: H3K27ac (Abcam ab4729)

text: wild type

text: Homo sapiens

text: hNPCs


text: live

text: Generic

text: H3K27me3 (Active Motif 39155)

text: wild type

text: Homo sapiens

text: hNPCs


text: live

text: Generic

text: H3K4me3 (Millipore 05-745)

text: wild type

text: Homo sapiens

text: hNPCs


text: live

text: Generic

text: H3K4me (Abcam ab8895)

text: wild type

text: Homo sapiens

text: hNPCs


text: live

text: Generic

text: SMARCA2 (Bethyl A301-015A)

text: wild type

text: Homo sapiens

text: hNPCs


text: INSTITUTE OF ZOOLOGY, CHINESE ACADEMY OF SCIENCES

text: live

text: Model organism or animal

characteristic: isolate

text: Oreonectes daqikongensis

text: muscle

characteristic: tissue

text: Model organism or animal sample from Oreonectes daqikongensis


text: Cancer Science Institute of Singapore

characteristic: INSDC first public

text: live

text: Generic

text: murine myeloid cells

characteristic: cell type

text: Mus musculus

text: 32D cells transduced with dCas9-KRAB-sg2 (replicate 2)


text: Cancer Science Institute of Singapore

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: murine myeloid cells

text: Mus musculus

text: 32D cells transduced with dCas9-KRAB-sg5 (replicate 1)


text: Cancer Science Institute of Singapore

text: live

text: Generic

text: murine myeloid cells

text: Mus musculus

characteristic: organism

text: 32D cells transduced with dCas9-KRAB-sg2 (replicate 1)


text: Cancer Science Institute of Singapore

text: live

text: Generic

text: murine myeloid cells

text: Mus musculus

text: 32D cells transduced with dCas9-KRAB-EV (replicate 2)


text: Cancer Science Institute of Singapore

text: live

text: Generic

text: murine myeloid cells

text: Mus musculus

text: 32D cells transduced with dCas9-KRAB-EV (replicate 1)


text: The Pirbright Institute

text: live

text: Viral

characteristic: collection date

text: Pakistan: Jhang, Punjab

characteristic: geo loc name

text: Bos taurus

characteristic: host

text: epithelium

characteristic: isolation source

text: Bos taurus primary thyroid cells

characteristic: lab host

text: Foot-and-mouth disease virus O

text: O

characteristic: serotype

text: Viral sample from Foot-and-mouth disease virus O


characteristic: External Id

text: The Pirbright Institute

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Viral

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Pakistan: Jhang, Punjab

text: Bubalus bubalis

text: epithelium

text: Bos taurus primary thyroid cells

text: Foot-and-mouth disease virus O

text: O

characteristic: title


text: The Pirbright Institute

characteristic: INSDC first public

text: live

text: Viral

characteristic: SRA accession

text: Pakistan: Sahiwal, Punjab

text: Bos taurus

characteristic: isolate

text: epithelium

text: Bos taurus primary thyroid cells

text: Foot-and-mouth disease virus O

text: O


text: veterinary clinical/research, cow

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: TGEN

characteristic: collected by

text: Escherichia

characteristic: genus

text: USA:AZ

text: Stool (Bos taurus)

text: bos taurus:NCBITAXON_9913, feces:UBERON_0001988

characteristic: ontological term

text: Escherichia coli

text: animal

characteristic: source type

text: coli

characteristic: species

characteristic: strain

text: Pathogen: environmental/food/other sample from Escherichia coli


characteristic: External Id

text: Department of Animal Sciences, University of Pannonia

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: female

characteristic: Sex

text: Adult

characteristic: developmental stage

text: Lates calcarifer

characteristic: organism

text: Ovary

text: Gonad

characteristic: tissue


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission package

text: intersex

text: Adult

text: Lates calcarifer

text: Transitional gonad stage 1

text: Gonad

characteristic: title


text: live

text: Generic

text: male

text: Adult

text: Lates calcarifer

text: Testis

text: Gonad


text: live

text: Generic

text: intersex

text: Adult

text: Lates calcarifer

text: Transitional gonad stage 4

text: Gonad


text: live

text: Generic

text: intersex

text: Adult

text: Lates calcarifer

text: Transitional gonad stage 3

text: Gonad


text: live

text: Generic

text: intersex

text: Adult

text: Lates calcarifer

text: Transitional gonad stage 2

text: Gonad


M. hyorhinis strain JF5820

text: University of Bern

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: piglet

characteristic: env feature

text: lung

text: Switzerland: Bern

characteristic: geo loc name

text: Pig

characteristic: host

text: Lungs

characteristic: isolation source

text: Mesomycoplasma hyorhinis

text: Primary publication

text: tissue

characteristic: sample type

text: Microbe sample from Mesomycoplasma hyorhinis


M. hyopneumoniae strain F7.2C

characteristic: External Id

text: University of Bern

characteristic: INSDC center name

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.host-associated

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: slaughter house

characteristic: env biome

text: pig

text: lung

text: Belgium: Genth

text: pig

text: Mesomycoplasma hyopneumoniae

text: Primary publication

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Mesomycoplasma hyopneumoniae


text: IGC, Salk Institute for Biological Studies

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: High fat diet with doxycycline

characteristic: diet

text: ColA-AMPKa1(312)/AMPKa1(312);R26-rtTA/rtTA;Albumin-Cre

characteristic: genotype

text: Mus musculus

characteristic: organism

text: Liver

text: liver


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission package

text: High fat diet

text: Mus musculus

text: Liver

text: liver

characteristic: tissue

characteristic: title


characteristic: External Id

text: live

text: Generic

text: High fat diet with doxycycline

text: ColA-AMPKa1(312)/AMPKa1(312);R26-rtTA/rtTA

text: Mus musculus

text: Liver

text: liver


characteristic: INSDC center name

text: live

text: Generic

text: High fat diet

text: Mus musculus

text: Liver

text: liver


text: Bar-Ilan University

text: live

text: Generic

text: 14 days

characteristic: age

characteristic: background ecotype

text: expressing INTACT

text: Arabidopsis thaliana

text: roots

text: roots

text: Root RNA seq Lib 2


text: Bar-Ilan University

text: live

text: Generic

text: 14 days

text: expressing INTACT

text: Arabidopsis thaliana

text: roots

text: roots

text: Root RNA seq Lib 1


text: Bar-Ilan University

text: live

text: Generic

text: 14 days old

text: expressing INTACT

text: streptavidin affinity purification

characteristic: nuclei purification method

text: Arabidopsis thaliana

text: root

text: roots

text: Root ATAC seq Lib 3


text: Bar-Ilan University

characteristic: INSDC secondary accession

text: live

text: Generic

text: 14 days old

text: expressing INTACT

text: streptavidin affinity purification

text: Arabidopsis thaliana

text: root

text: roots

text: Root ATAC seq Lib 2


text: Bar-Ilan University

text: live

characteristic: INSDC status

text: Generic

text: 14 days old

text: expressing INTACT

text: streptavidin affinity purification

text: Arabidopsis thaliana

text: root

text: roots

text: Root ATAC seq Lib 1


Erwinia psidii (LPF 534)

text: Universidade de Brasilia

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: Laboratorio de Patologia Florestal/BIAGRO

text: Erwinia psidii is a phytopathogenic gram-negative bacterium of the Enterobacteriaceae family. This pathogen is the causal agent of bacterial blight of guava (Psidium guajava) and wilt and die-back of Eucalyptus spp.. The isolate was collected in 2016 from Eucalyptus dunnii in Guaiba, RS State, Brazil.

characteristic: description

text: Brazil: Rio Grande do Sul, Guaiba

text: Eucalyptus dunnii

characteristic: host

text: Erwinia psidii

text: cell culture

text: LPF 534

characteristic: strain

text: Microbe sample from Erwinia psidii


Erwinia psidii (LPF 640)

text: Universidade de Brasilia

text: live

text: Microbe, viral or environmental

text: Laboratorio de Patologia Florestal/Bioagro

text: Erwinia psidii is a phytopathogenic gram-negative bacterium of the Enterobacteriaceae family. This pathogen is the causal agent of bacterial blight of guava (Psidium guajava) and wilt and die-back of Eucalyptus spp.. The isolate was collected in 2016 from Eucalyptus sp. in Conceicao, SP State, Brazil.

text: Brazil: Sao Paulo, Conceicao

text: Eucalyptus sp.

text: Erwinia psidii

characteristic: organism

text: cell culture

text: LPF 640

text: Microbe sample from Erwinia psidii


Erwinia psidii (LPF 681)

text: Universidade de Brasilia

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: Erwinia psidii is a phytopathogenic gram-negative bacterium of the Enterobacteriaceae family. This pathogen is the causal agent of bacterial blight of guava (Psidium guajava) and wilt and die-back of Eucalyptus spp.. The isolate was collected in 2016 from Guava in Vista Alegre do Alto, SP State, Brazil.

text: Brazil: Sao Paulo, Vista Alegre do Alto

text: Psidium guajava

text: Erwinia psidii

text: cell culture

text: LPF 681

text: Microbe sample from Erwinia psidii


text: The Salk Institute for Biological Studies

characteristic: INSDC last update

text: live

text: Generic

characteristic: SRA accession

text: FOSL2 (Cell signaling Technology 19967)

characteristic: antibody

characteristic: genotype/variation

text: Homo sapiens

text: R1159Q/+ hNPCs


characteristic: External Id

text: live

text: Generic

characteristic: NCBI submission package

text: FOSL2 (Cell signaling Technology 19967)

text: Homo sapiens

text: K755R/+ hNPCs

characteristic: title


characteristic: INSDC center name

text: live

text: Generic

text: FOSL2 (Cell signaling Technology 19967)

text: wild type

text: Homo sapiens

text: hNPCs


text: live

text: Generic

text: Homo sapiens

text: R1159Q/+ hNPCs


text: live

text: Generic

text: Homo sapiens

text: K755R/+ hNPCs


text: live

text: Generic

text: wild type

text: Homo sapiens

text: hNPCs


name: Spiroplasma hy2 from Drosophila hydei H25

text: Texas A&M University

text: live

text: Microbe, viral or environmental

characteristic: collection date

characteristic: environmental sample

text: Mexico

characteristic: geo loc name

text: Drosophila hydei H25

characteristic: isolate

text: 18.905833 N 99.606583 W

characteristic: lat lon

text: symbiont metagenome

characteristic: metagenome source

characteristic: metagenomic

text: This BioSample is a metagenomic assembly obtained from host BioSample: SAMN10521822

characteristic: note

text: Spiroplasma sp. hy2

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Spiroplasma hy2


Roots

text: Beijing University of Agriculture

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Plant

characteristic: NCBI submission model

characteristic: age

text: Yanshanhongli

characteristic: cultivar

text: China:Beijing

text: Castanea mollissima

characteristic: organism

text: Roots

characteristic: tissue

text: Plant sample from Castanea mollissima


Flower buds

characteristic: External Id

text: Beijing University of Agriculture

characteristic: INSDC center name

text: live

text: Plant

characteristic: SRA accession

text: Yanshanhongli

text: China:Beijing

text: Castanea mollissima

text: Flower buds

text: Plant sample from Castanea mollissima

characteristic: title


Cotyledons

text: Beijing University of Agriculture

text: live

text: Plant

text: Yanshanhongli

text: China:Beijing

characteristic: geo loc name

text: Castanea mollissima

text: Cotyledons

text: Plant sample from Castanea mollissima


crested ibis

text: Zhejiang University

text: live

text: Model organism or animal

characteristic: NCBI submission package

text: crested ibis

characteristic: breed

text: embryos and nestlings

text: Nipponia nippon

text: pooled male and female

characteristic: sex

text: blood

text: Model organism or animal sample from crested ibis


name: Chirostoma (Menidia) estor, transcriptome assembly and annotation (whole larvae)

characteristic: INSDC first public

text: live

text: Model organism or animal

text: larvae

characteristic: dev stage

text: Patzcuaro lake; Michoacan, Mexico

characteristic: ecotype

text: Mexico: Michoacan

text: Chirostoma estor

text: not determined

text: whole larvae


Acinetobacter johnsonii C1707

text: Shanghai Veterinary Research Institute

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: Shanghai Veterinary Research Institute

text: China:Anhui

text: duck

characteristic: isolate

text: duck farm

text: Acinetobacter johnsonii

characteristic: strain

text: Pathogen: environmental/food/other sample from Acinetobacter johnsonii


text: Ankara University

text: live

text: Plant

characteristic: NCBI submission model

characteristic: age

characteristic: cultivar

text: Seedling

text: Turkey

text: Triticum aestivum

characteristic: organism

text: Leaf

text: Plant sample from Triticum aestivum


Anastrepha striata metagenomic sample

characteristic: External Id

text: Texas A&M University

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

characteristic: collection date

text: Mexico

text: Anastrepha striata

characteristic: host

text: Wolbachia endosymbiont of Anastrepha striata

text: Whole flies

characteristic: sample type

text: Microbe sample from Wolbachia striata


text: wuhan university

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: China

characteristic: geo loc name

text: soil

characteristic: isolation source

text: Nakamurella antarctica

text: whole organism

text: Microbe sample from Nakamurella antarctica

characteristic: title


text: Beijing Academy of Agriculture and Forestry Science

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: China: Inner Mongolia

text: rhizosphere soil of wheat

text: Paenibacillus rhizophilus

text: whole organism

characteristic: strain

text: Microbe sample from Paenibacillus rhizophilus

text: type strain of Paenibacillus rhizophilus

characteristic: type material


text: MPI for heart and lung research

text: live

text: Generic

characteristic: NCBI submission model

text: adult

characteristic: developmental stage

text: Healthy controls

characteristic: disease state

text: Mus musculus

characteristic: organism

text: brain microvessels

text: brain microvessels

characteristic: tissue

text: Healthy brain microvessels 4


characteristic: External Id

text: MPI for heart and lung research

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: adult

text: Healthy controls

text: Mus musculus

text: brain microvessels

text: brain microvessels

text: Healthy brain microvessels 3


text: MPI for heart and lung research

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

text: adult

text: Healthy controls

text: Mus musculus

text: brain microvessels

text: brain microvessels

text: Healthy brain microvessels 2


text: MPI for heart and lung research

text: live

text: Generic

text: adult

text: Healthy controls

text: Mus musculus

text: brain microvessels

text: brain microvessels

text: Healthy brain microvessels 1


text: MPI for heart and lung research

text: live

text: Generic

text: adult

text: S. pneumoniae infected

text: Mus musculus

text: brain microvessels

text: brain microvessels

text: Meningitis brain microvessels 4


text: MPI for heart and lung research

text: live

text: Generic

text: adult

text: S. pneumoniae infected

text: Mus musculus

text: brain microvessels

text: brain microvessels

text: Meningitis brain microvessels 3


text: MPI for heart and lung research

text: live

text: Generic

text: adult

text: S. pneumoniae infected

text: Mus musculus

text: brain microvessels

text: brain microvessels

text: Meningitis brain microvessels 2


text: MPI for heart and lung research

text: live

text: Generic

text: adult

text: S. pneumoniae infected

text: Mus musculus

text: brain microvessels

text: brain microvessels

text: Meningitis brain microvessels 1


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Blood

characteristic: body site

text: DS-LCCLD-MDS

text: Blood

characteristic: histological type

text: No

characteristic: is tumor

text: Homo sapiens

text: male

characteristic: sex

text: Case-Control

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Non-tumor DNA sample from Blood of a human male participant in the dbGaP study Genome-Wide Association Study of HCC in Non-Asian USA Population


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: DNA

text: Whole Blood

text: DS-LCCLD-MDS

text: Whole Blood

text: No

text: Homo sapiens

characteristic: organism

text: male

text: Case-Control

text: Non-tumor DNA sample from Whole Blood of a human male participant in the dbGaP study Genome-Wide Association Study of HCC in Non-Asian USA Population

characteristic: title


text: dbGaP

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Blood

text: DS-LCCLD-MDS

text: Blood

text: No

text: Homo sapiens

text: male

text: Case-Control

text: Genome-Wide Association Study of HCC in Non-Asian USA Population


text: dbGaP

text: live

text: Generic

text: DNA

text: Whole Blood

characteristic: body site

text: DS-LCCLD-MDS

text: Whole Blood

characteristic: histological type

text: No

characteristic: is tumor

text: Homo sapiens

text: male

characteristic: sex

text: Case-Control

characteristic: study design


characteristic: External Id

text: dbGaP

text: live

text: Generic

text: DNA

text: Buffy Coat

text: DS-LCCLD-MDS

text: Buffy Coat

text: No

text: Homo sapiens

text: female

text: Case-Control

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Non-tumor DNA sample from Buffy Coat of a human female participant in the dbGaP study Genome-Wide Association Study of HCC in Non-Asian USA Population


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: DNA

text: Buffy Coat

text: DS-LCCLD-MDS

text: Buffy Coat

text: No

text: Homo sapiens

characteristic: organism

text: male

text: Case-Control

text: Non-tumor DNA sample from Buffy Coat of a human male participant in the dbGaP study Genome-Wide Association Study of HCC in Non-Asian USA Population


text: dbGaP

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

text: Blood

text: DS-LCCLD-MDS

text: Blood

text: No

text: Homo sapiens

text: female

text: Case-Control

text: Non-tumor DNA sample from Blood of a human female participant in the dbGaP study Genome-Wide Association Study of HCC in Non-Asian USA Population

characteristic: title


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: biospecimen repository sample id

text: Whole Blood

characteristic: body site

text: DS-LCCLD-MDS

text: Whole Blood

characteristic: histological type

text: No

characteristic: is tumor

text: Homo sapiens

text: female

characteristic: sex

text: Case-Control

text: Non-tumor DNA sample from Whole Blood of a human female participant in the dbGaP study Genome-Wide Association Study of HCC in Non-Asian USA Population


characteristic: External Id

text: dbGaP

text: live

text: Generic

text: DNA

text: Buffy Coat

text: DS-HCC-IRB

text: Buffy Coat

text: No

text: Homo sapiens

text: male

text: Case-Control

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: DNA

text: Blood

text: DS-LCCLD-MDS

text: Blood

text: Yes

characteristic: is technical control

text: No

text: Homo sapiens

text: female

text: Case-Control

characteristic: submitter handle


text: dbGaP

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

text: Blood

text: DS-LCCLD-MDS

text: Blood

text: Yes

text: No

text: Homo sapiens

characteristic: organism

text: male

text: Case-Control

characteristic: title


characteristic: External Id

text: dbGaP

text: live

text: Generic

text: DNA

characteristic: biospecimen repository sample id

text: Buffy Coat

characteristic: body site

text: DS-HCC-IRB

text: Buffy Coat

characteristic: histological type

text: No

characteristic: is tumor

text: Homo sapiens

text: female

characteristic: sex

text: Case-Control


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Generic

text: DNA

text: Buffy Coat

text: DS-HCC-IRB

text: Buffy Coat

text: Yes

text: No

text: Homo sapiens

text: male

text: Case-Control

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id


text: dbGaP

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

text: Whole Blood

text: DS-LCCLD-MDS

text: Whole Blood

text: Yes

characteristic: is technical control

text: No

text: Homo sapiens

text: female

text: Case-Control

characteristic: submitter handle


characteristic: External Id

text: dbGaP

text: live

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Whole Blood

text: DS-LCCLD-MDS

text: Whole Blood

text: Yes

text: No

text: Homo sapiens

characteristic: organism

text: male

text: Case-Control

characteristic: title


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Generic

text: DNA

text: Buffy Coat

characteristic: body site

text: DS-LCCLD-MDS

text: Buffy Coat

characteristic: histological type

text: Yes

text: No

characteristic: is tumor

text: Homo sapiens

text: male

characteristic: sex

text: Case-Control


text: dbGaP

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Generic

text: DNA

text: Buffy Coat

text: DS-LCCLD-MDS

text: Buffy Coat

text: Yes

text: No

text: Homo sapiens

text: female

text: Case-Control

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id


characteristic: External Id

text: San Joaquin Valley Agricultural Sciences Center, USDA

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: SRA accession

characteristic: collection date

text: Taiwan:Taichung

characteristic: geo loc name

text: Leafhopper

characteristic: host

text: biological sample

characteristic: isolation source

text: Candidatus Karelsulcia muelleri

text: metagenome assembly

characteristic: sample type

characteristic: strain

text: Microbe sample from Candidatus Karelsulcia muelleri


Rhodobacterales sp. SCGC-AG-145-A05

text: University of Georgia

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: depth

text: USA:Monterey Bay

characteristic: isolate

text: single cell amplified by MDA; seawater

text: 36.835 N 121.901 W

characteristic: lat lon

characteristic: organism

text: single cell

text: Microbe sample from Rhodobacterales bacterium SCGC-AG-145-A05

characteristic: title


Rhodobacterales sp. SCGC-AG-145-N17

characteristic: External Id

text: University of Georgia

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: USA:Monterey Bay

text: single cell amplified by MDA; seawater

text: 36.835 N 121.901 W

text: single cell

text: Microbe sample from Rhodobacterales bacterium SCGC-AG-145-N17


Rhodobacterales sp. SCGC-AG-151-C16

text: University of Georgia

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: SRA accession

characteristic: collection date

text: USA:Monterey Bay

characteristic: geo loc name

text: single cell amplified by MDA; seawater

text: 36.835 N 121.901 W

text: single cell

text: Microbe sample from Rhodobacterales bacterium SCGC-AG-151-C16


text: The Salk Institute for Biological Studies

text: live

text: Generic

text: Abcam ab110641

characteristic: antibody source

characteristic: genotype/variation

text: Homo sapiens

text: K755R/+ hNPCs


characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Generic

text: Abcam ab110641

text: wild type

text: Homo sapiens

text: hNPCs


text: live

text: Generic

characteristic: NCBI submission package

text: Abcam ab15597

text: Homo sapiens

text: R1159Q/+ hNPCs


text: live

text: Generic

text: Abcam ab15597

text: Homo sapiens

text: K755R/+ hNPCs


text: live

text: Generic

text: Abcam ab15597

text: wild type

text: Homo sapiens

text: hNPCs


text: live

text: Generic

text: Homo sapiens

text: R1159Q/+ hNPCs


text: live

text: Generic

text: Homo sapiens

text: K755R/+ hNPCs


text: live

text: Generic

text: wild type

text: Homo sapiens

text: hNPCs


text: live

text: Generic

text: Abcam ab110641

text: Homo sapiens

text: R1159Q/+ hNPCs


text: environmental

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

text: live

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: FDA

characteristic: collected by

characteristic: fda lab id

text: Listeria

characteristic: genus

text: USA:MA

text: environmental swab

characteristic: isolation source

text: environmental (swab or sampling):GENEPIO_0001732

characteristic: ontological term

text: Listeria welshimeri

text: GenomeTrakr

characteristic: project name

text: United States Food and Drug Administration|Office of Regulatory Affairs|Northeast Food and Feed Laboratory

characteristic: sequenced by

text: environmental

characteristic: source type

text: welshimeri

characteristic: species

characteristic: strain

text: Pathogen: environmental/food/other sample from Listeria welshimeri


Halomarina species SPP-AMP-1

characteristic: External Id

text: institute of microbial technology

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: collection date

text: India:Goa

characteristic: geo loc name

text: salt pan

text: Halocatena pleomorpha

characteristic: organism

text: whole organism

characteristic: sample type

text: Microbe sample from Halomarina oriensis

characteristic: title

text: type strain of Halocatena pleomorpha

characteristic: type material


text: Mycoplasma hominis

characteristic: INSDC center name

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: SRA accession

text: China: Beijing

text: Homo sapiens

characteristic: host

text: a mid aged Chinese man suffered from renal cyst

characteristic: isolate

text: drainage after operation

characteristic: isolation source

text: Metamycoplasma hominis

text: drainage

text: Strain X

text: Microbe sample from Metamycoplasma hominis


FuspSaruf - Fulicoffula sp. FuspSaruf

characteristic: External Id

text: University of Illinois at Urbana-Champaign

characteristic: INSDC first public

text: live

text: Invertebrate

text: wildtype

characteristic: breed

text: 1 individual

characteristic: description

text: Malawi: Northern Region

text: Sarothrura rufa

text: FuspSaruf

text: Philopteridae sp. FuspSaruf

text: whole insect

characteristic: tissue

text: Invertebrate sample from Philopteridae sp. FuspSaruf


FmspCorob - Formicaphagus sp. FmspCorob

text: live

characteristic: INSDC status

text: Invertebrate

characteristic: NCBI submission model

text: wildtype

characteristic: collection date

text: 1 individual

text: Brazil

characteristic: geo loc name

text: Conopophaga roberti

text: FmspCorob

text: Rallicola sp. FmspCorob

characteristic: organism

text: whole insect

text: Invertebrate sample from Rallicola sp. FmspCorob


text: FDA Contracted Laboratory

characteristic: Collected by

text: multi-ingredient, eggs

characteristic: IFSAC Category

characteristic: INSDC center name

characteristic: INSDC last update

text: live

characteristic: Isolate name alias

text: Pathogen.env

characteristic: PublicAccession

characteristic: Strain

text: Listeria

characteristic: genus

text: USA:FL

text: egg salad

text: egg food product:FOODON_00001274, salad:FOODON_03316042

characteristic: ontological term

text: Listeria monocytogenes

text: food

characteristic: source type

text: monocytogenes

characteristic: species

text: Pathogen: environmental/food/other sample from Listeria monocytogenes

characteristic: title


text: FDA Contracted Laboratory

characteristic: External Id

text: multi-ingredient, eggs, root/underground (tubers)

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission package

text: Listeria

text: USA:FL

text: potato and egg salad

characteristic: isolation source

text: potato salad:FOODON_03304708, egg food product:FOODON_00001274

text: Listeria monocytogenes

text: food

text: monocytogenes


Aquabacterium sp.

text: Shanghai Academy of Agricultural Sciences

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: collection date

text: China: Shanghai

characteristic: geo loc name

text: soil

text: Aquabacterium soli

characteristic: organism

text: cell culture

characteristic: sample type

characteristic: strain

text: Microbe sample from Aquabacterium sp.

text: type strain of Aquabacterium soli

characteristic: type-material


text: dairy

characteristic: IFSAC+ Category

text: FDA/CFSAN

characteristic: INSDC center name

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: ARL

characteristic: collected by

text: Virulence gene profiles and phylogeny of Shiga toxin-positive Escherichia coli strains isolated from FDA regulated foods during 2010-2017

characteristic: description

characteristic: genotype

text: USA:NY

characteristic: isolate

text: raw milk cheddar cheese

text: cheddar cheese:FOODON_03302458|food (raw):FOODON_03311126|milk:UBERON_0001913

text: Escherichia coli

characteristic: serotype

text: food

text: Pathogen: environmental/food/other sample from Escherichia coli


characteristic: External Id

text: clinical/research, human

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

characteristic: PublicAccession

text: clinical/host-associated

text: Michigan Department of Agriculture and Rural Development

text: Escherichia

characteristic: genus

text: USA:MI

text: Homo sapiens

characteristic: host

text: stool

characteristic: isolation source

characteristic: ontological term

text: Escherichia coli O157:H7

text: human

characteristic: source type

text: coli

characteristic: species

text: Pathogen: clinical or host-associated sample from Escherichia coli O157:H7

characteristic: title


text: clinical/research, human

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Pathogen.cl

text: clinical/host-associated

characteristic: collected by

characteristic: collection date

text: Campylobacter

text: USA:MI

characteristic: geo loc name

text: Homo sapiens

text: stool

text: Campylobacter jejuni

characteristic: organism

text: human

text: jejuni

characteristic: strain

text: Pathogen: clinical or host-associated sample from Campylobacter jejuni


characteristic: External Id

text: clinical/research| human

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

characteristic: SRA accession

text: clinical/host-associated

text: Duke University/ Ruhuna University

text: Escherichia

text: Sri Lanka

text: Homo sapiens

text: stool

text: Escherichia coli

text: human

text: coli

text: Pathogen: clinical or host-associated sample from Escherichia coli


text: clinical/research, human

text: live

text: Pathogen.cl

characteristic: PublicAccession

text: clinical/host-associated

text: Duke University/ Ruhuna University

text: Escherichia

characteristic: genus

text: Sri Lanka

text: Homo sapiens

characteristic: host

text: stool

characteristic: isolation source

characteristic: ontological term

text: Escherichia coli

text: human

characteristic: source type

text: coli

characteristic: species

characteristic: title


text: Zhejiang University

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Metagenome or environmental

characteristic: description

text: MFC anode biofilm section1

text: 30.14 N 120.10 E

text: biofilm metagenome

characteristic: organism

text: mixed culture


characteristic: External Id

text: Zhejiang University

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: MFC anode biofilm section2

text: 30.14 N 120.10 E

text: biofilm metagenome

text: mixed culture


text: Zhejiang University

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: MFC anode biofilm section3

text: 30.14 N 120.10 E

text: biofilm metagenome

text: mixed culture


text: Zhejiang University

text: live

text: Metagenome or environmental

text: MFC anode biofilm section4

text: 30.14 N 120.10 E

text: biofilm metagenome

text: mixed culture


text: Zhejiang University

text: live

text: Metagenome or environmental

text: MFC anode biofilm section5

text: 30.14 N 120.10 E

text: biofilm metagenome

text: mixed culture


text: Zhejiang University

text: live

text: Metagenome or environmental

text: MFC anode biofilm section6

text: 30.14 N 120.10 E

text: biofilm metagenome

text: mixed culture


text: Zhejiang University

text: live

text: Metagenome or environmental

text: MFC anode biofilm section7

text: 30.14 N 120.10 E

text: biofilm metagenome

text: mixed culture


text: Zhejiang University

text: live

text: Metagenome or environmental

text: MFC anode biofilm section8

text: 30.14 N 120.10 E

text: biofilm metagenome

text: mixed culture


text: Zhejiang University

text: live

text: Metagenome or environmental

text: MFC anode biofilm section9

text: 30.14 N 120.10 E

text: biofilm metagenome

text: mixed culture


text: Zhejiang University

text: live

text: Metagenome or environmental

text: MFC anode biofilm section10

text: 30.14 N 120.10 E

text: biofilm metagenome

text: mixed culture


text: Zhejiang University

text: live

text: Metagenome or environmental

text: MFC anode biofilm section11

text: 30.14 N 120.10 E

text: biofilm metagenome

text: mixed culture


text: Zhejiang University

text: live

text: Metagenome or environmental

text: MFC anode biofilm section12

text: 30.14 N 120.10 E

text: biofilm metagenome

text: mixed culture


text: CDC GCWGS

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: SRA accession

text: CDC

characteristic: collected by

characteristic: collection date

characteristic: geo loc name

text: Homo sapiens

characteristic: host age

text: Gonorrhea

characteristic: host disease

text: male

characteristic: host sex

text: Urethral

text: pathogen.cl

text: Neisseria gonorrhoeae

characteristic: strain

text: GCWGS


Bacillus mycoides strain DWBF

text: Dalhousie Unversity

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: 241.9 m

characteristic: altitude

text: Canada

text: top of dual media biofilter from water biofiltration treating fresh lake water

text: 44.640000 N 63.570000 W

text: Bacillus mycoides

text: From -80 culture into 10 ml TSB - incubate over time and then transfer to fresh TSB and incubate to mid- exponential phase

text: 1 - 50 ml steril falcon tube

text: pure culture

text: DWBF-LA

text: cold climate - 2- 25 C

characteristic: temp

text: Microbe sample from Bacillus mycoides

characteristic: title


Pseudomonas frederiksbergensis XY25D11

characteristic: External Id

text: zhejiang university

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: Xiaoyuan Tao

text: China

text: Xiaoyuan Tao

characteristic: identified by

text: rhizosphere of Sorghum

characteristic: isolation source

text: Xueying Guan

characteristic: lab host

text: Pseudomonas frederiksbergensis

characteristic: organism

text: cell culture

characteristic: sample type

text: Microbe sample from Pseudomonas frederiksbergensis


Drosophila Aldrichi FR0317-09

text: Texas A&M University

text: live

text: Invertebrate

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

characteristic: date isofemale line established

text: USA: San Marcos, Texas, Freeman Ranch

characteristic: geo loc name

characteristic: isolate

text: Fly Trap

text: 29.935278 N 98.014284 W

characteristic: lat lon

text: Drosophila aldrichi

text: Whole organism

characteristic: tissue

text: Invertebrate sample from Drosophila aldrichi


text: JNU

characteristic: INSDC center name

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: MIGS.eu

text: MIGS/MIMS/MIMARKS.plant-associated

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: soil isolate

characteristic: estimated size

text: India: New Delhi

text: soil

text: Talaromyces pinophilus

text: diploid

characteristic: ploidy

text: Vegetative

characteristic: propagation

characteristic: strain

text: Talaromyces cellulolyticus soil isolate

characteristic: title


L.serriola 170 bp WGS library sample

characteristic: External Id

text: UC Davis Genome Center

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Plant

characteristic: NCBI submission model

characteristic: NCBI submission package

text: UCD MichelmoreLab

characteristic: biomaterial provider

characteristic: cultivar

text: seedlings

characteristic: dev stage

text: USA:UC Davis

text: greenhouse

text: Lactuca serriola

characteristic: organism

characteristic: replicate

text: whole organism

characteristic: sample type

text: seedlings or leaves

text: Lactuca serriola Illumina WGS libraries 170 bp


L.serriola 2.5 Kb WGS library sample

text: UC Davis Genome Center

characteristic: INSDC center name

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Plant

characteristic: SRA accession

text: UCD MichelmoreLab

characteristic: collection date

text: seedlings

text: USA:UC Davis

characteristic: geo loc name

text: greenhouse

text: Lactuca serriola

text: whole organism

text: seedlings or leaves

characteristic: tissue

text: Lactuca serriola Illumina WGS libraries 2.5 kb


L.serriola 10 Kb WGS library sample

characteristic: External Id

text: UC Davis Genome Center

characteristic: INSDC first public

text: live

text: Plant

text: UCD MichelmoreLab

text: seedlings

text: USA:UC Davis

text: greenhouse

text: Lactuca serriola

text: whole organism

text: seedlings or leaves

text: Lactuca serriola Illumina WGS libraries 10 kb

characteristic: title


text: environmental

characteristic: IFSAC+ Category

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: FDA

characteristic: collected by

characteristic: fda lab id

text: Listeria

characteristic: genus

text: USA:WA

text: environmental swab

characteristic: isolation source

text: environmental (swab or sampling):genepio_0001732

characteristic: ontological term

text: Listeria monocytogenes

text: GenomeTrakr

characteristic: project name

text: United States Food and Drug Administration|Office of Regulatory Affairs|Pacific Northwest Laboratory

characteristic: sequenced by

text: environmental

characteristic: source type

text: monocytogenes

characteristic: species

characteristic: strain

text: Pathogen: environmental/food/other sample from Listeria monocytogenes


characteristic: External Id

text: environmental

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FDA

characteristic: collection date

text: Salmonella

text: USA:CA

characteristic: geo loc name

text: environmental swab

text: environmental (swab or sampling):GENEPIO_0001732

text: Salmonella enterica

characteristic: organism

text: GenomeTrakr

text: United States Food and Drug Administration|Office of Regulatory Affairs|Pacific Southwest Food and Feed Laboratory

text: environmental

text: enterica

text: Pathogen: environmental/food/other sample from Salmonella enterica

characteristic: title