MAG Fe_165 from SRA: SRR13961593

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the wetland metagenome BioSample: SAMN18309517

text: China: Zoige wetland

characteristic: isolate

text: enrichment from wetland soil

text: 33.9333 N 102.8667 E

text: wetland metagenome

text: Candidatus Methanoperedens sp.

text: metagenomic assembly


MAG Fe_173 from SRA: SRR13961592

status: PUBLIC

characteristic: External Id

text: Institute Of Microbiology Chinese Academy of Sciences

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

tag: attribute

characteristic: collection date

text: This BioSample is a metagenomic assembly obtained from the wetland metagenome BioSample: SAMN18309518

characteristic: derived-from

characteristic: environmental sample

text: China: Zoige wetland

characteristic: geo loc name

text: enrichment from wetland soil

characteristic: isolation source

text: 33.9333 N 102.8667 E

characteristic: lat lon

text: wetland metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Candidatus Methanoperedens sp.

characteristic: organism

text: metagenomic assembly

characteristic: sample-type

text: Microbe sample from Candidatus Methanoperedens sp.

characteristic: title


AvagaL1 MBL

text: Marine Biological Laboratory

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Invertebrate

text: Russia: Biostation Lake Glubokoe in Ruza district of the Moscow region

text: L1/L1 MBL

text: moss which grew on trunks of aspen Populus tremula

text: This sample group is the combination of the 2 individual BioSamples: SAMN10341802 and SAMN12423262

characteristic: note

text: Adineta vaga

text: whole animal

characteristic: tissue

text: Invertebrate sample from Adineta vaga


characteristic: External Id

text: China Agricultural University

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: at anthesis

characteristic: developmental stage

text: wild type

characteristic: genotype

text: Cucumis sativus

text: female bud

text: Fruits


text: China Agricultural University

text: live

text: Generic

text: at anthesis

text: CsCRC-RNAi lines

text: Cucumis sativus

text: female bud

text: Fruits


text: environmental-water

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

text: live

characteristic: LexMapr Version

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: INTA

characteristic: collected by

characteristic: collection date

text: Salmonella

characteristic: genus

text: Chile

characteristic: geo loc name

text: canal

characteristic: isolation source

characteristic: ontological term

text: Salmonella enterica

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: environmental

characteristic: source type

text: enterica

characteristic: species

characteristic: strain

text: Pathogen: environmental/food/other sample from Salmonella enterica


characteristic: External Id

text: Martinez, Hamon Center for Therapeutic Oncology Research, UT Southwestern Medical Center

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: post natal day 158

characteristic: age

text: PMID: 9568714

characteristic: animal reference

text: calcineurin transgenic

text: Mus musculus

characteristic: organism

text: heart

text: heart

characteristic: tissue

text: 2163 CbAtg JIB-04_rep_3

characteristic: title

characteristic: treatment


text: live

text: Generic

text: post natal day 158

text: PMID: 9568714

text: calcineurin transgenic

characteristic: genotype

text: Mus musculus

text: heart

text: heart

text: 2160 CnAtg JIB-04_rep_2


text: live

text: Generic

text: post natal day 158

text: PMID: 9568714

text: calcineurin transgenic

text: Mus musculus

text: heart

characteristic: strain

text: heart

text: 2158 CnAtg JIB-04: rep_1


characteristic: External Id

text: live

text: Generic

text: post natal day 158

text: PMID: 9568714

text: calcineurin transgenic

text: Mus musculus

text: heart

text: heart

text: 2162 CnAtg Ve_rep_2

text: Vehicle


characteristic: INSDC center name

text: live

text: Generic

text: post natal day 158

text: PMID: 9568714

text: calcineurin transgenic

text: Mus musculus

text: heart

text: heart

text: 2161 CnAtg Ve_rep_1

text: Vehicle


text: environmental-water

characteristic: IFSAC+ Category

characteristic: INSDC first public

text: live

characteristic: LexMapr Version

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: INTA

characteristic: collected by

characteristic: collection date

text: Salmonella

characteristic: genus

text: Chile

characteristic: geo loc name

text: river

characteristic: isolation source

characteristic: ontological term

text: Salmonella enterica

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: environmental

characteristic: source type

text: enterica

characteristic: species


characteristic: External Id

text: Helmholtz Institute for RNA-based Infection Research

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: dksA::kan

characteristic: genotype

text: Exponential

characteristic: growth phase

text: Acinetobacter baumannii

characteristic: organism

text: Batch culture Mueller Hinton broth

text: ATCC 17978

characteristic: strain

text: dksA Zn1

characteristic: title

characteristic: treatment


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: dksA::kan

text: Exponential

text: Acinetobacter baumannii

text: Batch culture Mueller Hinton broth

text: ATCC 17978

text: No treatment


text: live

text: Generic

text: Wild-type

text: Exponential

text: Acinetobacter baumannii

text: Batch culture Mueller Hinton broth

text: ATCC 17978

text: WT Cu3


text: live

text: Generic

text: Wild-type

text: Exponential

text: Acinetobacter baumannii

text: Batch culture Mueller Hinton broth

text: ATCC 17978

text: WT Cu2


text: live

text: Generic

text: Wild-type

text: Exponential

text: Acinetobacter baumannii

text: Batch culture Mueller Hinton broth

text: ATCC 17978

text: WT Cu1


text: live

text: Generic

text: Wild-type

text: Exponential

text: Acinetobacter baumannii

text: Batch culture Mueller Hinton broth

text: ATCC 17978

text: WT Zn3


text: live

text: Generic

text: Wild-type

text: Exponential

text: Acinetobacter baumannii

text: Batch culture Mueller Hinton broth

text: ATCC 17978

text: WT Zn2


text: live

text: Generic

text: Wild-type

text: Exponential

text: Acinetobacter baumannii

text: Batch culture Mueller Hinton broth

text: ATCC 17978

text: WT Zn1


text: live

text: Generic

text: Wild-type

text: Exponential

text: Acinetobacter baumannii

text: Batch culture Mueller Hinton broth

text: ATCC 17978

text: No treatment


text: live

text: Generic

text: dksA::kan

text: Late exponential

text: Acinetobacter baumannii

text: Batch culture Mueller Hinton broth

text: ATCC 17978

text: dksA ES3

text: No treatment


text: live

text: Generic

text: dksA::kan

text: Late exponential

text: Acinetobacter baumannii

text: Batch culture Mueller Hinton broth

text: ATCC 17978

text: dksA ES2

text: No treatment


text: live

text: Generic

text: dksA::kan

text: Late exponential

text: Acinetobacter baumannii

text: Batch culture Mueller Hinton broth

text: ATCC 17978

text: dksA ES1

text: No treatment


text: live

text: Generic

text: dksA::kan

text: Exponential

text: Acinetobacter baumannii

text: Batch culture Mueller Hinton broth

text: ATCC 17978

text: dksA Cu1


text: live

text: Generic

text: dksA::kan

text: Exponential

text: Acinetobacter baumannii

text: Batch culture Mueller Hinton broth

text: ATCC 17978

text: dksA Zn3


text: live

text: Generic

text: dksA::kan

text: Exponential

text: Acinetobacter baumannii

text: Batch culture Mueller Hinton broth

text: ATCC 17978

text: dksA Zn2


text: live

text: Generic

text: Wild-type

text: Late exponential

text: Acinetobacter baumannii

text: Batch culture Mueller Hinton broth

text: ATCC 17978

text: WT ES3

text: No treatment


text: live

text: Generic

text: Wild-type

text: Late exponential

text: Acinetobacter baumannii

text: Batch culture Mueller Hinton broth

text: ATCC 17978

text: WT ES2

text: No treatment


text: live

text: Generic

text: Wild-type

text: Late exponential

text: Acinetobacter baumannii

text: Batch culture Mueller Hinton broth

text: ATCC 17978

text: WT ES1

text: No treatment


text: live

text: Generic

text: dksA::kan

text: Exponential

text: Acinetobacter baumannii

text: Batch culture Mueller Hinton broth

text: ATCC 17978

text: dksA Cu3


text: live

text: Generic

text: dksA::kan

text: Exponential

text: Acinetobacter baumannii

text: Batch culture Mueller Hinton broth

text: ATCC 17978

text: dksA Cu2


text: environmental-water

characteristic: IFSAC+ Category

text: live

characteristic: LexMapr Version

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: INTA

characteristic: collected by

characteristic: collection date

text: Salmonella

characteristic: genus

text: Chile

characteristic: geo loc name

text: canal

characteristic: isolation source

characteristic: ontological term

text: Salmonella enterica

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: environmental

characteristic: source type

text: enterica


characteristic: External Id

text: Oklahoma State University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Plant

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

characteristic: biogroup

text: Canada: Alberta

text: Lodgepole Pine

characteristic: isolate

text: Pinus contorta

characteristic: organism

text: Fresh Pine Needle

characteristic: tissue

text: Plant sample from Pinus contorta

characteristic: title


characteristic: Elevation (m)

text: Oklahoma State University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: Latitude

text: 115° 34’

characteristic: Longitude

text: Plant

text: Canada: Judy Creek, Alberta

text: Lodgepole Pine

text: Pinus contorta

text: Fresh Pine Needle

text: Plant sample from Pinus contorta


characteristic: External Id

text: Oklahoma State University

characteristic: INSDC last update

text: live

text: Plant

text: Canada: Swan Hills, Alberta

text: Lodgepole Pine

text: Pinus contorta

text: Fresh Pine Needle

text: Plant sample from Pinus contorta


text: Oklahoma State University

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Plant

text: Canada: Timeau, Alberta

text: Lodgepole Pine

text: Pinus contorta

text: Fresh Pine Needle

text: Plant sample from Pinus contorta


text: Oklahoma State University

text: live

text: Plant

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Canada: Virginia Hills, Alberta

text: Lodgepole Pine

text: Pinus contorta

text: Fresh Pine Needle

text: Plant sample from Pinus contorta


text: environmental-water

characteristic: IFSAC+ Category

text: live

characteristic: LexMapr Version

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: INTA

characteristic: collected by

characteristic: collection date

text: Salmonella

characteristic: genus

text: Chile

characteristic: geo loc name

text: river

characteristic: isolation source

characteristic: ontological term

text: Salmonella enterica

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: environmental

characteristic: source type

text: enterica

characteristic: species

characteristic: strain


characteristic: External Id

text: University of Texas Southwestern Medical Center

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: cell line

text: Huh751 DMSO differentiation Day 10 Replicate 3

characteristic: objective response

text: Homo sapiens

characteristic: organism

characteristic: title


text: live

text: Generic

characteristic: SRA accession

text: Huh751 DMSO differentiation Day 10 Replicate 2

text: Homo sapiens


text: live

text: Generic

text: Huh751 DMSO differentiation Day 10 Replicate 1

text: Homo sapiens


text: live

text: Generic

text: Huh751 DMSO differentiation Day 7 Replicate 3

text: Homo sapiens


text: live

text: Generic

text: Huh751 DMSO differentiation Day 7 Replicate 2

text: Homo sapiens


text: live

text: Generic

text: Huh751 DMSO differentiation Day 7 Replicate 1

text: Homo sapiens


text: live

text: Generic

text: Huh751 DMSO differentiation Day 3 Replicate 3

text: Homo sapiens


text: live

text: Generic

text: Huh751 DMSO differentiation Day 3 Replicate 2

text: Homo sapiens


text: live

text: Generic

text: Huh751 DMSO differentiation Day 3 Replicate 1

text: Homo sapiens


text: environmental

characteristic: IFSAC+ Category

text: live

characteristic: LexMapr Version

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: INTA

characteristic: collected by

characteristic: collection date

text: Salmonella

characteristic: genus

text: Chile

characteristic: geo loc name

text: creek

characteristic: isolation source

characteristic: ontological term

text: Salmonella enterica

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: environmental

text: enterica


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: cell line

text: Huh751 DMSO differentiation Day 0 Replicate 3

text: Homo sapiens


text: live

text: Generic

characteristic: SRA accession

text: Huh751 DMSO differentiation Day 0 Replicate 2

characteristic: objective response

text: Homo sapiens

characteristic: organism

characteristic: title


text: live

text: Generic

text: Huh751 DMSO differentiation Day 0 Replicate 1

text: Homo sapiens


text: Max Rubner-Institut

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: Germany: Kiel

characteristic: geo loc name

text: Supermarket

characteristic: isolation source

text: Staphylococcus shinii

text: single cell

characteristic: sample type

characteristic: strain

text: Microbe sample from Staphylococcus shinii

text: type strain of Staphylococcus shinii

characteristic: type-material


Mock

characteristic: External Id

text: Poznan University of Technology

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.miscellaneous

text: Mock community (Zymoresearch D6300)

characteristic: description

text: Poland

text: 52.405096 N 16.950554 E

text: bioreactor metagenome

text: Mock community


Bioreactor inoculum

text: Poznan University of Technology

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIMS.me

characteristic: NCBI submission model

text: MIGS/MIMS/MIMARKS.miscellaneous

text: Inoculum used to start the process

text: Poland

text: 52.405096 N 16.950554 E

text: bioreactor metagenome

text: Process inoculum


text: Poznan University of Technology

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.miscellaneous

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: bioreactor

text: Sample from bioreactor 1 day 22

text: Poland

text: 52.405096 N 16.950554 E

text: bioreactor metagenome

text: Sample from bioreactor 1 day 22


text: Poznan University of Technology

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.miscellaneous

text: Sample from bioreactor 1 day 48

text: Poland

text: 52.405096 N 16.950554 E

text: bioreactor metagenome

characteristic: organism

text: Sample from bioreactor 1 day 48

characteristic: title


text: Poznan University of Technology

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.miscellaneous

text: Sample from bioreactor 1 day 72

text: Poland

text: 52.405096 N 16.950554 E

text: bioreactor metagenome

text: Sample from bioreactor 1 day 72


text: Poznan University of Technology

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.miscellaneous

text: Sample from bioreactor 1 day 88

text: Poland

text: 52.405096 N 16.950554 E

text: bioreactor metagenome

text: Sample from bioreactor 1 day 88


text: Poznan University of Technology

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.miscellaneous

text: Sample from bioreactor 1 day 107

text: Poland

text: 52.405096 N 16.950554 E

text: bioreactor metagenome

text: Sample from bioreactor 1 day 107


text: Poznan University of Technology

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.miscellaneous

text: Sample from bioreactor 1 day 112

text: Poland

text: 52.405096 N 16.950554 E

text: bioreactor metagenome

text: Sample from bioreactor 1 day 112


text: Poznan University of Technology

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.miscellaneous

text: Sample from bioreactor 1 day 118

text: Poland

text: 52.405096 N 16.950554 E

text: bioreactor metagenome

text: Sample from bioreactor 1 day 118


text: Poznan University of Technology

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.miscellaneous

text: Sample from bioreactor 1 day 140

text: Poland

text: 52.405096 N 16.950554 E

text: bioreactor metagenome

text: Sample from bioreactor 1 day 140


text: Poznan University of Technology

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.miscellaneous

text: Sample from bioreactor 2 day 22

text: Poland

text: 52.405096 N 16.950554 E

text: bioreactor metagenome

text: Sample from bioreactor 2 day 22


text: Poznan University of Technology

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.miscellaneous

text: Sample from bioreactor 2 day 48

text: Poland

text: 52.405096 N 16.950554 E

text: bioreactor metagenome

text: Sample from bioreactor 2 day 48


text: Poznan University of Technology

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.miscellaneous

text: Sample from bioreactor 2 day 48

text: Poland

text: 52.405096 N 16.950554 E

text: bioreactor metagenome

text: Sample from bioreactor 2 day 72


text: Poznan University of Technology

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.miscellaneous

text: Sample from bioreactor 2 day 88

text: Poland

text: 52.405096 N 16.950554 E

text: bioreactor metagenome

text: Sample from bioreactor 2 day 88


text: Poznan University of Technology

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.miscellaneous

text: Sample from bioreactor 2 day 118

text: Poland

text: 52.405096 N 16.950554 E

text: bioreactor metagenome

text: Sample from bioreactor 2 day 118


text: Poznan University of Technology

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.miscellaneous

text: Sample from bioreactor 2 day 140

text: Poland

text: 52.405096 N 16.950554 E

text: bioreactor metagenome

text: Sample from bioreactor 2 day 140


text: Human Genetics, university of california, los angeles

text: live

text: Generic

text: Mus musculus

text: GEO accession GSM5176328 is currently private and is scheduled to be released on Nov 09, 2023.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM5176327 is currently private and is scheduled to be released on Nov 09, 2023.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM5176326 is currently private and is scheduled to be released on Nov 09, 2023.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM5176325 is currently private and is scheduled to be released on Nov 09, 2023.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM5176324 is currently private and is scheduled to be released on Nov 09, 2023.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM5176323 is currently private and is scheduled to be released on Nov 09, 2023.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM5176322 is currently private and is scheduled to be released on Nov 09, 2023.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM5176321 is currently private and is scheduled to be released on Nov 09, 2023.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM5176395 is currently private and is scheduled to be released on Nov 09, 2023.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM5176388 is currently private and is scheduled to be released on Nov 09, 2023.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM5176387 is currently private and is scheduled to be released on Nov 09, 2023.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM5176386 is currently private and is scheduled to be released on Nov 09, 2023.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM5176385 is currently private and is scheduled to be released on Nov 09, 2023.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM5176384 is currently private and is scheduled to be released on Nov 09, 2023.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM5176383 is currently private and is scheduled to be released on Nov 09, 2023.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM5176382 is currently private and is scheduled to be released on Nov 09, 2023.


text: Human Genetics, university of california, los angeles

text: live

text: Generic

text: Mus musculus

text: GEO accession GSM5176381 is currently private and is scheduled to be released on Nov 09, 2023.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM5176380 is currently private and is scheduled to be released on Nov 09, 2023.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM5176379 is currently private and is scheduled to be released on Nov 09, 2023.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM5176378 is currently private and is scheduled to be released on Nov 09, 2023.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM5176377 is currently private and is scheduled to be released on Nov 09, 2023.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM5176413 is currently private and is scheduled to be released on Nov 09, 2023.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM5176411 is currently private and is scheduled to be released on Nov 09, 2023.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM5176410 is currently private and is scheduled to be released on Nov 09, 2023.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM5176409 is currently private and is scheduled to be released on Nov 09, 2023.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM5176408 is currently private and is scheduled to be released on Nov 09, 2023.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM5176407 is currently private and is scheduled to be released on Nov 09, 2023.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM5176405 is currently private and is scheduled to be released on Nov 09, 2023.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM5176403 is currently private and is scheduled to be released on Nov 09, 2023.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM5176397 is currently private and is scheduled to be released on Nov 09, 2023.


text: UT Southwestern Medical Center

text: live

text: Generic

text: Pten knockdown

characteristic: genetic modification

text: Mus musculus

text: liver

text: Liver tissue of mouse with liver-specific knockout of Pten 1


text: UT Southwestern Medical Center

text: live

text: Generic

text: Pten-Scap double knockdown

text: Mus musculus

text: liver

text: Liver tissue of mouse with liver-specific double knockout of Pten and Scap 3


text: UT Southwestern Medical Center

text: live

text: Generic

text: Pten-Scap double knockdown

text: Mus musculus

text: liver

text: Liver tissue of mouse with liver-specific double knockout of Pten and Scap 2


text: UT Southwestern Medical Center

text: live

text: Generic

text: Pten-Scap double knockdown

text: Mus musculus

text: liver

text: Liver tissue of mouse with liver-specific double knockout of Pten and Scap 1


text: UT Southwestern Medical Center

text: live

text: Generic

text: WT

text: Mus musculus

text: liver

text: Liver tissue of wild-type mouse 3


text: UT Southwestern Medical Center

text: live

text: Generic

text: WT

text: Mus musculus

text: liver

text: Liver tissue of wild-type mouse 2


text: UT Southwestern Medical Center

text: live

text: Generic

text: WT

text: Mus musculus

text: liver

text: Liver tissue of wild-type mouse 1


text: UT Southwestern Medical Center

text: live

text: Generic

text: Scap knockdown

text: Mus musculus

text: liver

text: Liver tissue of mouse with liver-specific knockout of Scap 3


text: UT Southwestern Medical Center

text: live

text: Generic

text: Scap knockdown

text: Mus musculus

text: liver

text: Liver tissue of mouse with liver-specific knockout of Scap 2


text: UT Southwestern Medical Center

text: live

text: Generic

text: Scap knockdown

text: Mus musculus

text: liver

text: Liver tissue of mouse with liver-specific knockout of Scap 1


text: UT Southwestern Medical Center

text: live

text: Generic

text: Pten knockdown

text: Mus musculus

text: liver

text: Liver tissue of mouse with liver-specific knockout of Pten 3


text: UT Southwestern Medical Center

text: live

text: Generic

text: Pten knockdown

text: Mus musculus

text: liver

text: Liver tissue of mouse with liver-specific knockout of Pten 2


text: veterinary clinical/research| poultry

characteristic: IFSAC+ Category

text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.env

text: environmental/food/other

characteristic: attribute package

text: South Carolina Department of Health

characteristic: collected by

characteristic: collection date

text: USA:SC

characteristic: geo loc name

text: cecum chicken

characteristic: isolation source

text: caecum:uberon_0001153| chicken:foodon_03411457

characteristic: ontological term

text: Salmonella enterica

text: GenomeTrakr; LFFM-FY1

text: South Carolina Department of Health and Environmental Control

text: animal

characteristic: source type

text: Pathogen: environmental/food/other sample from Salmonella enteric


characteristic: External Id

text: clinical/research| human

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

text: clinical/host-associated

text: NYSDOH

text: USA:NY

text: Listeria monocytogenes

text: human

characteristic: strain

text: Listeria monocytogenes


Pool 1.1

text: University of Sao Paulo

text: live

characteristic: INSDC status

text: Human

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

text: Tropical Medicine Foundation Dr Heitor Vieira Dourado, Manaus, Brazil

text: Mixture of 4 serum samples. Age: 49, 27, 55, and 48. Sex: Female, Male, Male, and Male

characteristic: description

text: Homo sapiens

characteristic: organism

text: Serum

text: female

characteristic: sex

text: Blood

characteristic: tissue

text: Human sample from Homo sapiens


Pool 2.1

text: University of Sao Paulo

text: live

text: Human

text: Mixture of 4 serum samples. Age: 37, 54 , 49, and 61. Sex: Male, Male, Female, and Male

text: Homo sapiens

text: Serum

text: male

text: Blood

text: Human sample from Homo sapiens

characteristic: title


Pool 3.1-7

text: University of Sao Paulo

text: live

text: Human

text: Mixture of 3 serum samples. Age: 59, 59, and 56. Sex: Male, Male, and Male

text: Homo sapiens

text: Serum

text: male

text: Blood

text: Human sample from Homo sapiens


Pool 4.2-5

text: University of Sao Paulo

text: live

text: Human

text: A single serum sample. Age: 30. Sex: Male

text: Homo sapiens

text: Serum

text: male

text: Blood

text: Human sample from Homo sapiens


Pool 5.2-8

text: University of Sao Paulo

text: live

text: Human

text: Mixture of 2 serum samples. Age: 64 and 66. Sex: Female and Female

text: Homo sapiens

text: Serum

text: female

text: Blood

text: Human sample from Homo sapiens


Pool 6.2-9

text: University of Sao Paulo

text: live

text: Human

text: Mixture of 2 serum samples. Age: 57 and 52. Sex: Female and Male

text: Homo sapiens

text: Serum

text: female

text: Blood

text: Human sample from Homo sapiens


Pool 7.2-10

text: University of Sao Paulo

text: live

text: Human

text: Mixture of 2 serum samples. Age: 45 and 55. Sex: Male and Male

text: Homo sapiens

text: Serum

text: male

text: Blood

text: Human sample from Homo sapiens


Pool 1

text: University of Sao Paulo

text: live

text: Human

text: Mixture of 4 serum samples. Age: 61, 23, 32, and 44. Sex: Male, Male, Female, and Female

text: Homo sapiens

text: Serum

text: male

text: Blood

text: Human sample from Homo sapiens


Pool 2

text: University of Sao Paulo

text: live

text: Human

text: Mixture of 9 serum samples. Age: 58, 57, 37, 63, 43, 38, 58, 62, and 63. Sex: Male, Female, Male, Male, Male, Male, Female, Male, and Male

text: Homo sapiens

text: Serum

text: male

text: Blood

text: Human sample from Homo sapiens


Pool 3

text: University of Sao Paulo

text: live

text: Human

text: Mixture of 9 serum samples. Age: 65, 54, 41, 35, 49, 31, 34, 27, and 35. Sex: Female, Male, Female, Male, Male, Female, Female, Male, and Male.

text: Homo sapiens

text: Serum

text: female

text: Blood

text: Human sample from Homo sapiens


Pool 4

text: University of Sao Paulo

text: live

text: Human

text: Mixture of 9 serum samples. Age: 55, 62, 51, 58, 58, 24, not collected, 38, and 40

text: Homo sapiens

text: Serum

text: female

text: Blood

text: Human sample from Homo sapiens


Pool 5

text: University of Sao Paulo

text: live

text: Human

text: Mixture of 13 serum samples. Age: 63, 53, 72, 51, 66, 25, 30, 49, 55, 56, 39, 37, and 38. Sex: Male, Male, Male, Male, Female, Male, Male, Male, Male, Female, Female, Male, and Male

text: Homo sapiens

text: Serum

text: male

text: Blood

text: Human sample from Homo sapiens


Pool 6

text: University of Sao Paulo

text: live

text: Human

text: Mixture of 11 serum samples: Age: 47, 38, 63, 66, 46, 51, 28, 53, 73, 64, and 42. Sex: Male, Female, Male, Male, Male, Male, Male, Male, Male, Male, and Male

text: Homo sapiens

text: Serum

text: male

text: Blood

text: Human sample from Homo sapiens


Pool 7

text: University of Sao Paulo

text: live

text: Human

text: Mixture of 3 serum samples. Age: 49, 24, and 45. Sex: Male, Male, and Male

text: Homo sapiens

text: Serum

text: male

text: Blood

text: Human sample from Homo sapiens


Pool 8

text: University of Sao Paulo

text: live

text: Human

text: Mixture of 2 serum samples. Age: 59 and 30. Sex: Male and Male

text: Homo sapiens

text: Serum

text: male

text: Blood

text: Human sample from Homo sapiens


Pool 9

text: University of Sao Paulo

text: live

text: Human

text: Mixture of 9 serum samples. Age: 55, not collected, 43, 40, 62, 66, 23, 29, and 50. Sex: Male, Female, Male, Female, Male, Female, Female, Female, and Male

text: Homo sapiens

text: Serum

text: male

text: Blood

text: Human sample from Homo sapiens


Pool 10

text: University of Sao Paulo

text: live

text: Human

text: Tropical Medicine Foundation Dr Heitor Vieira Dourado, Manaus, Brazil

text: Mixture of 7 serum samples. Age: 43, 33, 65, 51, 46, 33, and 30. Sex: Male, Male , Female, Male, Female, Male, and Female

text: Homo sapiens

text: Serum

text: male

text: Blood

text: Human sample from Homo sapiens


text: University of Granada

text: live

text: Invertebrate

characteristic: breed

text: Pathogen free sibling ticks were fed on Cavia porcellus in their nymph states. In their adult stage they were fed on Oryctolagus cuniculus. This tick was fed up to 12 hours. RNA from its salivary glands was extracted and reads were generated using the NovaSeq S4 flow cell (NovaSeq S4 lane 150 PE) platform.

text: Adult, 12h of feeding

text: Czech Republic: Institutional colony located in the Institute of Parasitology of the Biology Center of the Czech Academy of Sciences

text: Oryctolagus cuniculus

characteristic: host

text: Tick 1

characteristic: isolate

text: Ixodes ricinus

text: Salivary Gland

text: Ixodes ricinus: 1_12h_SG_S268


TTK-O

characteristic: External Id

text: DFCI

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Human

text: ScienCell Research Laboratories

characteristic: biomaterial provider

characteristic: id

text: Normal primary human esophageal epithelial cells (HEsEpi) from ScienCell

text: Homo sapiens

text: female

text: esophageal epithelial cells

text: Human sample from Homo sapiens


D0 (DAY 0)

text: DFCI

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Human

characteristic: NCBI submission model

text: ScienCell Research Laboratories

text: Homo sapiens

text: female

text: esophageal epithelial cells

text: Human sample from Homo sapiens


C (Control)

text: DFCI

text: live

text: Human

characteristic: NCBI submission package

characteristic: SRA accession

text: ScienCell Research Laboratories

text: Homo sapiens

text: female

text: esophageal epithelial cells

text: Human sample from Homo sapiens


text: Arpaia, Microbiology & Immunology, Columbia University Irving Medical Center

text: live

text: Generic

text: Enriched lung mesenchymal cells from influenza-infected mice

characteristic: cell type

text: CD4-cre Areg-flox/flox

characteristic: genotype

text: Mus musculus

characteristic: organism

text: Lung mesenchymal cells

characteristic: strain

text: Areg-flox CD4-cre mesenchyme

text: H1N1/PR8 influenza at day 8 post infection

characteristic: treatment


text: live

text: Generic

text: Areg-flox/flox

text: Mus musculus

text: Lung mesenchymal cells

text: Areg-flox wildtype control mesenchyme

characteristic: title


characteristic: External Id

text: live

text: Generic

text: Lung mesenchymal cells

text: Mus musculus

text: Mouse lung

text: 50ng/mL EGF


characteristic: INSDC center name

text: live

text: Generic

text: Lung mesenchymal cells

text: Mus musculus

text: Mouse lung

text: 200ng/mL AREG


characteristic: INSDC first public

text: live

text: Generic

text: Lung mesenchymal cells

text: Mus musculus

text: Mouse lung

text: untreated


text: live

text: Generic

text: Lung alveolar epithelial cells from influenza-infected mice

text: Areg-flox/flox

text: Mus musculus

text: Mouse lung

text: Areg-flox wildtype control AECint Sample 4

text: H1N1/PR8 at day 5 post infection


text: live

text: Generic

text: CD4-cre Areg-flox/flox

text: Mus musculus

text: Mouse lung

text: Areg-flox CD4-Cre AECint Sample 4

text: H1N1/PR8 at day 5 post infection


text: live

text: Generic

text: Areg-flox/flox

text: Mus musculus

text: Mouse lung

text: Areg-flox wildtype control AECint Sample 3

text: H1N1/PR8 at day 5 post infection


text: live

text: Generic

text: CD4-cre Areg-flox/flox

text: Mus musculus

text: Mouse lung

text: Areg-flox CD4-Cre AECint Sample 3

text: H1N1/PR8 at day 5 post infection


text: live

text: Generic

text: CD4-cre Areg-flox/flox

text: Mus musculus

text: Mouse lung

text: Areg-flox CD4-Cre AECint Sample 2

text: H1N1/PR8 at day 5 post infection


text: live

text: Generic

text: Areg-flox/flox

text: Mus musculus

text: Mouse lung

text: Areg-flox wildtype control AECint Sample 2

text: H1N1/PR8 at day 5 post infection


text: live

text: Generic

text: Areg-flox/flox

text: Mus musculus

text: Mouse lung

text: Areg-flox wildtype control AECint Sample 1

text: H1N1/PR8 at day 5 post infection


text: live

text: Generic

text: CD4-cre Areg-flox/flox

text: Mus musculus

text: Mouse lung

text: Areg-flox CD4-Cre AECint Sample 1

text: H1N1/PR8 at day 5 post infection


text: live

text: Generic

text: Areg-flox/flox

text: Mus musculus

text: Mouse lung

text: Areg-flox wildtype control AT2 Sample 4

text: H1N1/PR8 at day 5 post infection


text: live

text: Generic

text: Areg-flox/flox

text: Mus musculus

text: Mouse lung

text: Areg-flox wildtype control AT2 Sample 3

text: H1N1/PR8 at day 5 post infection


text: live

text: Generic

text: Areg-flox/flox

text: Mus musculus

text: Mouse lung

text: Areg-flox wildtype control AT2 Sample 2

text: H1N1/PR8 at day 5 post infection


text: live

text: Generic

text: Areg-flox/flox

text: Mus musculus

text: Mouse lung

text: Areg-flox wildtype control AT2 Sample 1

text: H1N1/PR8 at day 5 post infection


text: Delorenzi, Bioinformatics Core Facility, Swiss Institute of Bioinformatics

text: live

text: Generic

characteristic: batch

text: Mx1Cre induction 2ug/g b.w. poly(I:C)

characteristic: cre

text: Target population from bone marrow: Lin- Sca1+ cKit+

characteristic: facs sorting

characteristic: group

text: Mus musculus

characteristic: replicate

text: BM LSK (Lin- Sca1+ cKit+)

text: C57BL/6J; Sv/129

characteristic: strain background

text: NOTCHWT_TCFKO_1 [Tcf7-Tg-1_S11]

text: Tcf7 lox/lox Mx1Cre

characteristic: transgene


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Mx1Cre induction 2ug/g b.w. poly(I:C)

text: Target population from bone marrow: CD45.2+ eGFP+ Lin- Sca1+ cKit+

text: Mus musculus

text: BM LSK (Lin- Sca1+ cKit+)

text: C57BL/6J; Sv/129

text: NICD_TCFKO_3 [RNIC-Tg-3_S6]

text: R26 N1IC lox/+ Tcf7 lox/lox Mx1Cre


text: live

text: Generic

text: Mx1Cre induction 2ug/g b.w. poly(I:C)

text: Mus musculus

characteristic: organism

text: BM LSK (Lin- Sca1+ cKit+)

text: C57BL/6J; Sv/129

text: NICD_TCFKO_2 [RNIC-Tg-2_S8]

characteristic: title

text: R26 N1IC lox/+ Tcf7 lox/lox Mx1Cre


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: Mx1Cre induction 2ug/g b.w. poly(I:C)

text: Mus musculus

text: BM LSK (Lin- Sca1+ cKit+)

text: C57BL/6J; Sv/129

text: NICD_TCFKO_1 [RNIC-Tg-1_S7]

text: R26 N1IC lox/+ Tcf7 lox/lox Mx1Cre


characteristic: INSDC first public

text: live

text: Generic

characteristic: batch

text: Mx1Cre induction 2ug/g b.w. poly(I:C)

text: Mus musculus

text: BM LSK (Lin- Sca1+ cKit+)

text: C57BL/6J; Sv/129

text: NICD_TCFWT_3 [RNIC-CTRL-3_S5]

text: R26 N1IC lox/+ Mx1Cre


text: live

text: Generic

text: Mx1Cre induction 2ug/g b.w. poly(I:C)

characteristic: cre

characteristic: facs sorting

text: Mus musculus

text: BM LSK (Lin- Sca1+ cKit+)

text: C57BL/6J; Sv/129

text: NICD_TCFWT_2 [RNIC-CTRL-2_S6]

text: R26 N1IC lox/+ Mx1Cre


text: live

text: Generic

text: Mx1Cre induction 2ug/g b.w. poly(I:C)

characteristic: group

text: Mus musculus

characteristic: replicate

text: BM LSK (Lin- Sca1+ cKit+)

text: C57BL/6J; Sv/129

text: NICD_TCFWT_1 [RNIC-CTRL-1_S5]

text: R26 N1IC lox/+ Mx1Cre


text: live

text: Generic

text: Controlled injection with 2ug/g body weight poly(I:C)

text: Mus musculus

text: BM LSK (Lin- Sca1+ cKit+)

text: C57BL/6J; Sv/129

characteristic: strain background

text: NOTCHWT_TCFWT_3 [RAD-14190-1_S1]

text: wild type

characteristic: transgene


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Mus musculus

text: BM LSK (Lin- Sca1+ cKit+)

text: C57BL/6J; Sv/129

text: NOTCHWT_TCFWT_2 [RAD-14187_S2]

text: wild type


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Mus musculus

text: BM LSK (Lin- Sca1+ cKit+)

text: C57BL/6J; Sv/129

text: NOTCHWT_TCFWT_1 [RAD-14186_S1]

text: wild type


text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Lung type II alveolar epithelial cells

characteristic: cell type

text: Areg-flox/flox

characteristic: genotype

text: Mus musculus

text: Lung type II alveolar epithelial cells

characteristic: strain

text: CRE-Negative Areg-flox/flox FLU 3

text: H1N1/PR8 at day 7 post infection

characteristic: treatment


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Lung type II alveolar epithelial cells

text: Areg-flox/flox

text: Mus musculus

characteristic: organism

text: Lung type II alveolar epithelial cells

text: CRE-Negative Areg-flox/flox FLU 2

characteristic: title

text: H1N1/PR8 at day 7 post infection


text: live

text: Generic

text: Lung type II alveolar epithelial cells

text: Areg-flox/flox

text: Mus musculus

text: Lung type II alveolar epithelial cells

text: CRE-Negative Areg-flox/flox FLU 1

text: H1N1/PR8 at day 7 post infection


text: live

text: Generic

text: Lung type II alveolar epithelial cells

text: Areg-flox/flox

text: Mus musculus

text: Lung type II alveolar epithelial cells

text: CRE-Negative Areg-flox/flox PBS 3

text: Mock PBS control isolated at day 7 post treatment


text: live

text: Generic

text: Lung type II alveolar epithelial cells

text: Areg-flox/flox

text: Mus musculus

text: Lung type II alveolar epithelial cells

text: CRE-Negative Areg-flox/flox PBS 2


text: live

text: Generic

text: Lung type II alveolar epithelial cells

text: Areg-flox/flox

text: Mus musculus

text: Lung type II alveolar epithelial cells

text: CRE-Negative Areg-flox/flox PBS 1


text: live

text: Generic

characteristic: batch

text: Mx1Cre induction 2ug/g b.w. poly(I:C)

characteristic: cre

characteristic: facs sorting

characteristic: group

text: Mus musculus

characteristic: replicate

text: BM LSK (Lin- Sca1+ cKit+)

text: C57BL/6J; Sv/129

characteristic: strain background

text: NOTCHWT_TCFKO_3 [Tcf7-Tg-3_S10]

text: Tcf7 lox/lox Mx1Cre


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Mx1Cre induction 2ug/g b.w. poly(I:C)

text: Mus musculus

text: BM LSK (Lin- Sca1+ cKit+)

text: C57BL/6J; Sv/129

text: NOTCHWT_TCFKO_2 [Tcf7-Tg-2_S9]

text: Tcf7 lox/lox Mx1Cre

characteristic: transgene


characteristic: External Id

text: live

text: Generic

characteristic: SRA accession

text: H3K27ac antibody (Diagenode Cat# C15410196, RRID:AB_2637079)

characteristic: chip antibody

text: Mx1Cre induction 2ug/g b.w. poly(I:C)

text: Mus musculus

text: BM LSK (Lin- Sca1+ cKit+)

text: C57BL/6J; Sv/129

text: R26 N1IC lox/+ Mx1Cre


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Mx1Cre induction 2ug/g b.w. poly(I:C)

text: Mus musculus

characteristic: organism

text: BM LSK (Lin- Sca1+ cKit+)

text: C57BL/6J; Sv/129

text: R26 N1IC lox/+ Tcf7 lox/lox Mx1Cre


text: live

text: Generic

characteristic: batch

text: cord blood CD34 cells

characteristic: cell type

text: Homo sapiens

text: CD34- CD38+ CD5- CD7+ GFP+

characteristic: title


text: live

text: Generic

text: BM LSK (Lin- Sca1+ cKit+)

characteristic: cre

characteristic: group

text: Mus musculus

characteristic: replicate

text: BM LSK (Lin- Sca1+ cKit+)

text: C57BL/6J; Sv/129

text: wild type


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: BM LSK (Lin- Sca1+ cKit+)

text: Mx1Cre induction 2ug/g b.w. poly(I:C)

text: Mus musculus

text: BM LSK (Lin- Sca1+ cKit+)

text: C57BL/6J; Sv/129

characteristic: strain background

text: R26 N1IC lox/+ Mx1Cre


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: BM LSK (Lin- Sca1+ cKit+)

text: Mx1Cre induction 2ug/g b.w. poly(I:C)

text: Mus musculus

text: BM LSK (Lin- Sca1+ cKit+)

text: C57BL/6J; Sv/129

text: R26 N1IC lox/+ Tcf7 lox/lox Mx1Cre


characteristic: External Id

text: live

text: Generic

characteristic: SRA accession

text: Mx1Cre induction 2ug/g b.w. poly(I:C)

characteristic: facs sorting

text: Mus musculus

text: BM LSK (Lin- Sca1+ cKit+)

text: C57BL/6J; Sv/129

text: R26 N1IC lox/+ Tcf7 lox/lox Mx1Cre

characteristic: transgene


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: chip antibody

text: Mus musculus

characteristic: organism

text: BM LSK (Lin- Sca1+ cKit+)

text: C57BL/6J; Sv/129

text: wild type


text: live

text: Generic

characteristic: batch

text: BM LSK (Lin- Sca1+ cKit+)

characteristic: cell type

text: Mx1Cre induction 2ug/g b.w. poly(I:C)

characteristic: cre

text: Mus musculus

text: BM LSK (Lin- Sca1+ cKit+)

text: C57BL/6J; Sv/129

characteristic: title

text: R26 N1IC lox/+ Mx1Cre TMe -/-


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Mus musculus

characteristic: replicate

text: BM LSK (Lin- Sca1+ cKit+)

text: C57BL/6J; Sv/129

text: wild type


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: 1μg CTCF antibody (Diagenode Cat# C15410210, RRID:AB_2753160)

text: Mx1Cre induction 2ug/g b.w. poly(I:C)

text: Mus musculus

text: BM LSK (Lin- Sca1+ cKit+)

text: C57BL/6J; Sv/129

characteristic: strain background

text: R26 N1IC lox/+ Mx1Cre


characteristic: External Id

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Mus musculus

text: BM LSK (Lin- Sca1+ cKit+)

text: C57BL/6J; Sv/129

text: wild type


characteristic: INSDC center name

text: live

text: Generic

text: Mx1Cre induction 2ug/g b.w. poly(I:C)

characteristic: facs sorting

text: Mus musculus

text: BM LSK (Lin- Sca1+ cKit+)

text: C57BL/6J; Sv/129

text: R26 N1IC lox/+ Tcf7 lox/lox Mx1Cre

characteristic: transgene


characteristic: INSDC first public

text: live

text: Generic

text: Mx1Cre induction 2ug/g b.w. poly(I:C)

text: Mus musculus

characteristic: organism

text: BM LSK (Lin- Sca1+ cKit+)

text: C57BL/6J; Sv/129

text: R26 N1IC lox/+ Mx1Cre


text: UAB

text: live

text: Generic

characteristic: cell line

text: triple-negative breast cancer cells

characteristic: cell type

text: WT

characteristic: genotype

text: Homo sapiens

text: breast cancer cells

text: MDA-MB-231-WT rep1


text: UAB

characteristic: INSDC last update

text: live

text: Generic

text: triple-negative breast cancer cells

text: Homo sapiens

text: breast cancer cells

text: MDA-MB-231-miR3662-KO rep2

characteristic: title


text: UAB

characteristic: INSDC secondary accession

text: live

text: Generic

text: triple-negative breast cancer cells

text: Homo sapiens

text: breast cancer cells

text: MDA-MB-231-miR3662-KO rep1


text: UAB

text: live

characteristic: INSDC status

text: Generic

text: triple-negative breast cancer cells

text: WT

text: Homo sapiens

text: breast cancer cells

text: MDA-MB-231-WT rep2


text: Nuffield Department of Surgical Sciences, University of Oxford

text: live

text: Generic

characteristic: NCBI submission model

text: OGT Si2

characteristic: agent

text: p53 (sc-126)

characteristic: chip antibody

text: Homo sapiens

text: LNCaPs

text: LNCaP_OGT Si2_INPUT


characteristic: External Id

text: live

text: Generic

characteristic: NCBI submission package

text: OGT Si1

text: p53 (sc-126)

text: Homo sapiens

text: LNCaPs

text: LNCaP_OGT Si1_INPUT


characteristic: INSDC center name

text: live

text: Generic

characteristic: SRA accession

text: VPRBP Si2

text: p53 (sc-126)

text: Homo sapiens

text: LNCaPs

text: LNCaP_VPRBP Si2_INPUT


text: live

text: Generic

text: VPRBP Si1

text: p53 (sc-126)

text: Homo sapiens

text: LNCaPs

text: LNCaP_VPRBP Si1_INPUT


text: live

text: Generic

text: Scr Si

text: p53 (sc-126)

text: Homo sapiens

text: LNCaPs

text: LNCaP_Scr Si_INPUT


text: live

text: Generic

text: OGT Si2

text: p53 (sc-126)

text: Homo sapiens

text: LNCaPs

text: LNCaP_OGT Si2_p53


text: live

text: Generic

text: OGT Si1

text: p53 (sc-126)

text: Homo sapiens

text: LNCaPs

text: LNCaP_OGT Si1_p53


text: live

text: Generic

text: VPRBP Si2

text: p53 (sc-126)

text: Homo sapiens

text: LNCaPs

text: LNCaP_VPRBP Si2_p53


text: live

text: Generic

text: VPRBP Si1

text: p53 (sc-126)

text: Homo sapiens

text: LNCaPs

text: LNCaP_VPRBP Si1_p53


text: live

text: Generic

text: Scr Si

text: p53 (sc-126)

text: Homo sapiens

text: LNCaPs

text: LNCaP_Scr Si_p53


text: live

text: Generic

text: Nutlin 3A

text: p53 (sc-126)

text: Homo sapiens

text: LNCaPs

text: LNCaP_Nutlin 3A_Input


text: live

text: Generic

text: Nutlin 3A

text: p53 (sc-126)

text: Homo sapiens

text: LNCaPs

text: LNCaP_Nutlin 3A_p53


text: Southwest Forestry University

text: live

text: Invertebrate

characteristic: age

text: China: Xundian, Kunming

text: Pinus yunnanensis

characteristic: host

text: Xundian

characteristic: isolate

text: Cephalcia chuxiongica

text: female

characteristic: sex

text: Abdomen

characteristic: tissue

text: Invertebrate sample from Cephalcia chuxiongica


text: Jiangsu Xuzhou Sweetpotato Research Center

characteristic: INSDC first public

text: live

text: Plant

characteristic: cultivar

text: Ipomoea batatas

characteristic: organism

text: chloroplast

text: Plant sample from Ipomoea batatas


Tanzania

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Plant

text: Tanzania

text: Ipomoea batatas

text: chloroplast

text: Plant sample from Ipomoea batatas

characteristic: title


Hongyou

text: live

characteristic: INSDC status

text: Plant

characteristic: NCBI submission model

text: Hongyou

text: Ipomoea batatas

text: chloroplast

text: Plant sample from Ipomoea batatas


Lizixiang

characteristic: External Id

text: live

text: Plant

text: Lizixiang

text: Ipomoea batatas

text: chloroplast

text: Plant sample from Ipomoea batatas


Erlangshao

text: live

text: Plant

characteristic: NCBI submission package

text: Erlangshao

text: Ipomoea batatas

text: chloroplast

text: Plant sample from Ipomoea batatas


Hanzishu

characteristic: INSDC center name

text: live

text: Plant

text: Hanzishu

text: Ipomoea batatas

text: chloroplast

text: Plant sample from Ipomoea batatas


NancyHall

text: live

text: Plant

characteristic: SRA accession

text: NancyHall

text: Ipomoea batatas

text: chloroplast

text: Plant sample from Ipomoea batatas


Hongyao

text: live

text: Plant

text: Hongyao

text: Ipomoea batatas

text: chloroplast

text: Plant sample from Ipomoea batatas


Huangmeigui

text: live

text: Plant

text: Huangmeigui

text: Ipomoea batatas

text: chloroplast

text: Plant sample from Ipomoea batatas


Kanghanzhong

text: live

text: Plant

text: Kanghanzhong

text: Ipomoea batatas

text: chloroplast

text: Plant sample from Ipomoea batatas


Shengnanshao

text: live

text: Plant

text: Shengnanshao

text: Ipomoea batatas

text: chloroplast

text: Plant sample from Ipomoea batatas


Nanchongxiangzhong

text: live

text: Plant

text: Nanchongxiangzhong

text: Ipomoea batatas

text: chloroplast

text: Plant sample from Ipomoea batatas


Dayeshu

text: live

text: Plant

text: Dayeshu

text: Ipomoea batatas

text: chloroplast

text: Plant sample from Ipomoea batatas


Thailand

text: live

text: Plant

text: Thailand

text: Ipomoea batatas

text: chloroplast

text: Plant sample from Ipomoea batatas


Wuguzai

text: live

text: Plant

text: Wuguzai

text: Ipomoea batatas

text: chloroplast

text: Plant sample from Ipomoea batatas


Xiaogencailiao

text: live

text: Plant

text: Xiaogencailiao

text: Ipomoea batatas

text: chloroplast

text: Plant sample from Ipomoea batatas


Zhanjiangcheng

text: live

text: Plant

text: Zhanjiangcheng

text: Ipomoea batatas

text: chloroplast

text: Plant sample from Ipomoea batatas


Xinxiang

text: live

text: Plant

text: Xinxiang

text: Ipomoea batatas

text: chloroplast

text: Plant sample from Ipomoea batatas


Anna

text: live

text: Plant

text: Anna

text: Ipomoea batatas

text: chloroplast

text: Plant sample from Ipomoea batatas


text: live

text: Plant

text: Ipomoea batatas

text: chloroplast

text: Plant sample from Ipomoea batatas


Hongdong

text: live

text: Plant

text: Hongdong

text: Ipomoea batatas

text: chloroplast

text: Plant sample from Ipomoea batatas


Yeshengzishu

text: live

text: Plant

text: Yeshengzishu

text: Ipomoea batatas

text: chloroplast

text: Plant sample from Ipomoea batatas


Hongpishu

text: live

text: Plant

text: Hongpishu

text: Ipomoea batatas

text: chloroplast

text: Plant sample from Ipomoea batatas


Huangpishu

text: live

text: Plant

text: Huangpishu

text: Ipomoea batatas

text: chloroplast

text: Plant sample from Ipomoea batatas


Jidanhuang

text: live

text: Plant

text: Jidanhuang

text: Ipomoea batatas

text: chloroplast

text: Plant sample from Ipomoea batatas


Peru

text: live

text: Plant

text: Peru

text: Ipomoea batatas

text: chloroplast

text: Plant sample from Ipomoea batatas


Fujianliancheng

text: live

text: Plant

text: Fujianliancheng

text: Ipomoea batatas

text: chloroplast

text: Plant sample from Ipomoea batatas


Jihei

text: live

text: Plant

text: Jihei

text: Ipomoea batatas

text: chloroplast

text: Plant sample from Ipomoea batatas


text: Kiran Mahajan Lab, Surgery, Washington University

text: live

text: Generic

characteristic: cell line

text: Prostate Cancer Cell Line

characteristic: cell type

text: Homo sapiens

text: Prostate Cancer

text: Charcoal stripped FBS

characteristic: treatment


text: live

text: Generic

text: Prostate Cancer Cell Line

text: IgG

characteristic: chip antibody

text: Homo sapiens

text: Prostate Cancer

text: Charcoal stripped FBS


text: live

text: Generic

text: Prostate Cancer Cell Line

text: RNA Pol II

text: Homo sapiens

text: Prostate Cancer

text: Charcoal stripped FBS


text: live

text: Generic

text: Prostate Cancer Cell Line

text: pan HOXB13

text: Homo sapiens

text: Prostate Cancer

text: Charcoal stripped FBS


text: live

text: Generic

text: Prostate cancer cell line

text: Homo sapiens

text: Prostate Cancer

text: Charcoal stripped FBS


text: live

text: Generic

text: Prostate cancer cell line

text: Homo sapiens

text: Prostate Cancer

text: Charcoal stripped FBS


text: live

text: Generic

text: Prostate cancer cell line

text: IgG Control

text: Homo sapiens

text: Prostate Cancer

text: Charcoal stripped FBS


HUL 20

text: Howard University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: USA: Washington D.C.

characteristic: geo loc name

text: Fermented milk (Laban)

characteristic: isolation source

text: 38.84122638 N 77.11910433 W

characteristic: lat lon

text: Schleiferilactobacillus harbinensis

text: Whole organism

characteristic: sample type

text: HUL 20

characteristic: strain

text: Microbe sample from Schleiferilactobacillus harbinensis


text: China CDC

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: China: Qinghai Province

text: feces

text: Cellulomonas dongxiuzhuiae

characteristic: organism

text: feces

text: Microbe sample from Cellulomonas dongxiuzhuiae

characteristic: title


characteristic: External Id

text: China CDC

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: China: Qinghai Province

text: feces

text: Cellulomonas dongxiuzhuiae

text: feces

text: type strain of Cellulomonas dongxiuzhuiae

characteristic: type-material


text: China CDC

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: China: Qinghai Province

text: feces

text: Cellulomonas fengjieae

text: feces

text: Microbe sample from Cellulomonas fengjieae


text: China CDC

text: live

text: Microbe, viral or environmental

text: China: Qinghai Province

text: feces

text: Cellulomonas fengjieae

text: feces

text: type strain of Cellulomonas fengjieae


name: Sample of Klebsiella pneumoniae EC0282-F-N716-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella pneumoniae


name: Sample of Klebsiella pneumoniae EC0313-F-N720-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella pneumoniae


name: Sample of Klebsiella pneumoniae EC0323-F-N722-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella pneumoniae


name: Sample of Klebsiella quasipneumoniae EC0332-F-N723-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella quasipneumoniae


name: Sample of Klebsiella variicola EC0416-F-N728-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella variicola


name: Sample of Klebsiella pneumoniae EC0430-F-N729-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella pneumoniae


name: Sample of Klebsiella pneumoniae EC0492-F-N705-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella pneumoniae


name: Sample of Klebsiella pneumoniae EC0900-F-N720-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella pneumoniae


name: Sample of Klebsiella pneumoniae EC0917-F-N703-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella pneumoniae


name: Sample of Klebsiella pneumoniae EC1148-F-N729-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella pneumoniae


name: Sample of Klebsiella pneumoniae EC1195-F-N718-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella pneumoniae


name: Sample of Klebsiella variicola EC1562-F-N718-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella variicola


name: Sample of Klebsiella pneumoniae EC1615-F-N710-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella pneumoniae


name: Sample of Klebsiella pneumoniae EC1763-F-N714-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella pneumoniae


name: Sample of Klebsiella pneumoniae EC1886-F-N702-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella pneumoniae


name: Sample of Klebsiella pneumoniae EC1911-F-N722-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella pneumoniae


name: Sample of Klebsiella pneumoniae EC2038-F-N704-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella pneumoniae


name: Sample of Klebsiella pneumoniae EC2552-F-N719-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella pneumoniae


name: Sample of Klebsiella pneumoniae EC2617-F-N721-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella pneumoniae


name: Sample of Klebsiella pneumoniae EC2806-F-N728-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella pneumoniae


name: Sample of Klebsiella pneumoniae EC2817-F-N703-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella pneumoniae


name: Sample of Klebsiella pneumoniae EC2860-F-N729-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella pneumoniae


name: Sample of Klebsiella pneumoniae EC2861-F-N703-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella pneumoniae


name: Sample of Klebsiella pneumoniae EC2884-F-N718-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella pneumoniae


name: Sample of Klebsiella pneumoniae EC2885-F-N719-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella pneumoniae


name: Sample of Klebsiella pneumoniae EC2951-F-N722-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella pneumoniae


name: Sample of Klebsiella pneumoniae EC2984-F-N705-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella pneumoniae


name: Sample of Klebsiella pneumoniae EC3046-F-N707-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella pneumoniae


name: Sample of Klebsiella pneumoniae EC3068-F-N710-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella pneumoniae


name: Sample of Klebsiella pneumoniae EC3070-F-N729-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella pneumoniae


name: Sample of Klebsiella pneumoniae EC3091-F-N718-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella pneumoniae


name: Sample of Klebsiella pneumoniae EC3130-F-N711-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella pneumoniae


name: Sample of Klebsiella pneumoniae EC3150-F-N720-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella pneumoniae


name: Sample of Klebsiella pneumoniae EC3208-F-N722-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella pneumoniae


name: Sample of Klebsiella pneumoniae GN04929-F-N710-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella pneumoniae


name: Sample of Klebsiella pneumoniae GN05714-F-N712-1-636

text: JCVI

text: live

text: Pathogen.cl

text: Klebsiella pneumoniae


text: Texas A&M University

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: Atlantic Ocean: ocean basin, northwest Gulf of Mexico

text: 20% CEWAF made with offshore Gulf of Mexico seawater sample depth of 550 m - T0, Replicate A

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe

text: Metagenome or environmental sample from seawater metagenome


text: Texas A&M University

text: live

text: Metagenome or environmental

characteristic: collection date

characteristic: geo loc name

text: 20% CEWAF made with offshore Gulf of Mexico seawater sample depth of 550 m - T0, Replicate B

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 20% CEWAF made with offshore Gulf of Mexico seawater sample depth of 550 m - T0, Replicate C

characteristic: isolation source

text: 27.6924 N 93.9380 W

characteristic: lat lon

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.2% CEWAF made with offshore Gulf of Mexico seawater sample depth of 550 m - T0, Replicate A

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.2% CEWAF made with offshore Gulf of Mexico seawater sample depth of 550 m - T0, Replicate B

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.2% CEWAF made with offshore Gulf of Mexico seawater sample depth of 550 m - T0, Replicate C

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 2% CEWAF made with offshore Gulf of Mexico seawater sample depth of 550 m - T0, Replicate A

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 2% CEWAF made with offshore Gulf of Mexico seawater sample depth of 550 m - T0, Replicate B

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 2% CEWAF made with offshore Gulf of Mexico seawater sample depth of 550 m - T0, Replicate C

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.25% COREXIT made with offshore Gulf of Mexico seawater sample depth of 550 m - T0, Replicate A

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.25% COREXIT made with offshore Gulf of Mexico seawater sample depth of 550 m - T0, Replicate B

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.25% COREXIT made with offshore Gulf of Mexico seawater sample depth of 550 m - T0, Replicate C

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.0025% COREXIT made with offshore Gulf of Mexico seawater sample depth of 550 m - T0, Replicate A

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.0025% COREXIT made with offshore Gulf of Mexico seawater sample depth of 550 m - T0, Replicate B

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.0025% COREXIT made with offshore Gulf of Mexico seawater sample depth of 550 m - T0, Replicate C

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: Atlantic Ocean: ocean basin, northwest Gulf of Mexico

text: 0.025% COREXIT made with offshore Gulf of Mexico seawater sample depth of 550 m - T0, Replicate A

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.025% COREXIT made with offshore Gulf of Mexico seawater sample depth of 550 m - T0, Replicate B

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe

text: Metagenome or environmental sample from seawater metagenome


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.025% COREXIT made with offshore Gulf of Mexico seawater sample depth of 550 m - T0, Replicate C

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: Offshore Gulf of Mexico seawater sample depth of 550 m - T0, Replicate A

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: Offshore Gulf of Mexico seawater sample depth of 550 m - T0, Replicate B

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: Offshore Gulf of Mexico seawater sample depth of 550 m - T0, Replicate C

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: MC252 oil with offshore Gulf of Mexico seawater sample depth of 550 m - T0, Replicate A

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: MC252 oil with offshore Gulf of Mexico seawater sample depth of 550 m - T0, Replicate B

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: MC252 oil with offshore Gulf of Mexico seawater sample depth of 550 m - T0, Replicate C

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 20% CEWAF made with offshore Gulf of Mexico seawater sample depth of 550 m - T3, Replicate A

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 20% CEWAF made with offshore Gulf of Mexico seawater sample depth of 550 m - T3, Replicate B

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 20% CEWAF made with offshore Gulf of Mexico seawater sample depth of 550 m - T3, Replicate C

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.2% CEWAF made with offshore Gulf of Mexico seawater sample depth of 550 m - T3, Replicate A

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.2% CEWAF made with offshore Gulf of Mexico seawater sample depth of 550 m - T3, Replicate B

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.2% CEWAF made with offshore Gulf of Mexico seawater sample depth of 550 m - T3, Replicate C

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: Atlantic Ocean: ocean basin, northwest Gulf of Mexico

text: 2% CEWAF made with offshore Gulf of Mexico seawater sample depth of 550 m - T3, Replicate A

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 2% CEWAF made with offshore Gulf of Mexico seawater sample depth of 550 m - T3, Replicate B

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 2% CEWAF made with offshore Gulf of Mexico seawater sample depth of 550 m - T3, Replicate C

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe

text: Metagenome or environmental sample from seawater metagenome


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.25% COREXIT made with offshore Gulf of Mexico seawater sample depth of 550 m - T3, Replicate A

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.25% COREXIT made with offshore Gulf of Mexico seawater sample depth of 550 m - T3, Replicate B

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.25% COREXIT made with offshore Gulf of Mexico seawater sample depth of 550 m - T3, Replicate C

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.0025% COREXIT made with offshore Gulf of Mexico seawater sample depth of 550 m - T3, Replicate A

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.0025% COREXIT made with offshore Gulf of Mexico seawater sample depth of 550 m - T3, Replicate B

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.0025% COREXIT made with offshore Gulf of Mexico seawater sample depth of 550 m - T3, Replicate C

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.025% COREXIT made with offshore Gulf of Mexico seawater sample depth of 550 m - T3, Replicate A

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.025% COREXIT made with offshore Gulf of Mexico seawater sample depth of 550 m - T3, Replicate B

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.025% COREXIT made with offshore Gulf of Mexico seawater sample depth of 550 m - T3, Replicate C

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: Offshore Gulf of Mexico seawater sample depth of 550 m - T3, Replicate A

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: Offshore Gulf of Mexico seawater sample depth of 550 m - T3, Replicate B

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: Offshore Gulf of Mexico seawater sample depth of 550 m - T3, Replicate C

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: Atlantic Ocean: ocean basin, northwest Gulf of Mexico

text: MC252 oil with offshore Gulf of Mexico seawater sample depth of 550 m - T3, Replicate A

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: MC252 oil with offshore Gulf of Mexico seawater sample depth of 550 m - T3, Replicate B

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 20% CEWAF made with offshore Gulf of Mexico seawater sample depth of 550 m - T6, Replicate A

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 20% CEWAF made with offshore Gulf of Mexico seawater sample depth of 550 m - T6, Replicate B

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe

text: Metagenome or environmental sample from seawater metagenome


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 20% CEWAF made with offshore Gulf of Mexico seawater sample depth of 550 m - T6, Replicate C

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.2% CEWAF made with offshore Gulf of Mexico seawater sample depth of 550 m - T6, Replicate A

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.2% CEWAF made with offshore Gulf of Mexico seawater sample depth of 550 m - T6, Replicate B

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.2% CEWAF made with offshore Gulf of Mexico seawater sample depth of 550 m - T6, Replicate C

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 2% CEWAF made with offshore Gulf of Mexico seawater sample depth of 550 m - T6, Replicate A

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 2% CEWAF made with offshore Gulf of Mexico seawater sample depth of 550 m - T6, Replicate B

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 2% CEWAF made with offshore Gulf of Mexico seawater sample depth of 550 m - T6, Replicate C

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.25% COREXIT made with offshore Gulf of Mexico seawater sample depth of 550 m - T6, Replicate A

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.25% COREXIT made with offshore Gulf of Mexico seawater sample depth of 550 m - T6, Replicate B

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.25% COREXIT made with offshore Gulf of Mexico seawater sample depth of 550 m - T6, Replicate C

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.0025% COREXIT made with offshore Gulf of Mexico seawater sample depth of 550 m - T6, Replicate A

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: Atlantic Ocean: ocean basin, northwest Gulf of Mexico

text: 0.0025% COREXIT made with offshore Gulf of Mexico seawater sample depth of 550 m - T6, Replicate B

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.0025% COREXIT made with offshore Gulf of Mexico seawater sample depth of 550 m - T6, Replicate C

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.025% COREXIT made with offshore Gulf of Mexico seawater sample depth of 550 m - T6, Replicate A

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.025% COREXIT made with offshore Gulf of Mexico seawater sample depth of 550 m - T6, Replicate B

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: 0.025% COREXIT made with offshore Gulf of Mexico seawater sample depth of 550 m - T6, Replicate C

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe

text: Metagenome or environmental sample from seawater metagenome


text: Texas A&M University

text: live

text: Metagenome or environmental

text: Offshore Gulf of Mexico seawater sample depth of 550 m - T6, Replicate A

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: Offshore Gulf of Mexico seawater sample depth of 550 m - T6, Replicate B

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: Offshore Gulf of Mexico seawater sample depth of 550 m - T6, Replicate C

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: MC252 oil with offshore Gulf of Mexico seawater sample depth of 550 m - T6, Replicate A

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: MC252 oil with offshore Gulf of Mexico seawater sample depth of 550 m - T6, Replicate B

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


text: Texas A&M University

text: live

text: Metagenome or environmental

text: MC252 oil with offshore Gulf of Mexico seawater sample depth of 550 m - T6, Replicate C

text: 27.6924 N 93.9380 W

text: seawater metagenome

text: aerobe


API-Blank

text: Texas A&M University

text: live

text: Metagenome or environmental

text: DNA extraction blank

text: 27.6924 N 93.9380 W

text: metagenome

text: Metagenome or environmental sample from metagenome


PCR-neg

text: Texas A&M University

text: live

text: Metagenome or environmental

text: PCR reaction with no template

text: 27.6924 N 93.9380 W

text: metagenome


SARS-CoV-2/South Korea/EID001/2021

text: Korea Disease Control and Prevention Agency

text: live

text: Pathogen.cl

text: South Korea

text: Felis catus

characteristic: host

text: severe acute respiratory syndrome

text: South Korea/EID001/2021

characteristic: isolate

text: feline isolate

text: SARS-CoV-2/South Korea/EID001/2021

characteristic: strain

text: Pathogen: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


SARS-CoV-2/South Korea/EID002/2021

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.cl

text: South Korea

text: Homo sapiens

text: severe acute respiratory syndrome

text: South Korea/EID002/2021

text: patient isolate

text: Severe acute respiratory syndrome coronavirus 2

characteristic: organism

text: SARS-CoV-2/South Korea/EID002/2021


SARS-CoV-2/South Korea/EID003/2021

characteristic: External Id

text: live

characteristic: INSDC status

text: Pathogen.cl

text: South Korea

text: Homo sapiens

text: severe acute respiratory syndrome

text: South Korea/EID003/2021

text: patient isolate

text: SARS-CoV-2/South Korea/EID003/2021

characteristic: title


text: Shantou University

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: biological replicate 1

characteristic: description

text: China:Shantou

text: Scylla paramamosain

text: hemolymph

text: 23.36 N 116.65 E

text: crustacean metagenome

text: siGFP


text: Shantou University

characteristic: INSDC center name

text: live

text: Metagenome or environmental

text: biological replicate 2

text: China:Shantou

text: Scylla paramamosain

text: hemolymph

text: 23.36 N 116.65 E

text: crustacean metagenome

text: siGFP


text: Shantou University

text: live

text: Metagenome or environmental

text: biological replicate 3

text: China:Shantou

text: Scylla paramamosain

text: hemolymph

text: 23.36 N 116.65 E

text: crustacean metagenome

text: siGFP


text: Shantou University

text: live

text: Metagenome or environmental

text: biological replicate 4

text: China:Shantou

text: Scylla paramamosain

text: hemolymph

text: 23.36 N 116.65 E

text: crustacean metagenome

text: siGFP


text: Shantou University

text: live

text: Metagenome or environmental

text: biological replicate 1

text: China:Shantou

text: Scylla paramamosain

text: hemolymph

text: 23.36 N 116.65 E

text: crustacean metagenome


text: Shantou University

text: live

text: Metagenome or environmental

text: biological replicate 2

text: China:Shantou

text: Scylla paramamosain

text: hemolymph

text: 23.36 N 116.65 E

text: crustacean metagenome


text: Shantou University

text: live

text: Metagenome or environmental

text: biological replicate 3

text: China:Shantou

text: Scylla paramamosain

text: hemolymph

text: 23.36 N 116.65 E

text: crustacean metagenome


text: Shantou University

text: live

text: Metagenome or environmental

text: biological replicate 4

text: China:Shantou

text: Scylla paramamosain

text: hemolymph

text: 23.36 N 116.65 E

text: crustacean metagenome


text: First Affiliated Hospital of Sun Yat-Sen University

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: Homo sapiens

text: gut metagenome

text: fecal

characteristic: tmp


text: Institute of Crop Sciences, Chinese Academy of Agricultural Sciences

text: live

text: Pathogen.cl

text: China: Shanghai

text: Oryza sativa

text: bacterial blight

text: rice leaf

text: not collected

text: Xanthomonas oryzae pv. oryzae

text: oryzae

characteristic: pathovar

text: Pathogen: clinical or host-associated sample from Xanthomonas oryzae pv. oryzae


text: live

text: Pathogen.cl

text: China: Jiangsu

text: Oryza sativa

characteristic: host

text: bacterial blight

text: rice leaf

text: not collected

text: Xanthomonas oryzae pv. oryzae

text: oryzae


text: live

text: Pathogen.cl

text: China: Zhejiang

text: Oryza sativa

text: bacterial blight

text: rice leaf

text: not collected

text: Xanthomonas oryzae pv. oryzae

text: oryzae


text: live

text: Pathogen.cl

text: China: Xinyi, Guangdong

text: Oryza sativa

text: bacterial blight

text: rice leaf

text: not collected

text: Xanthomonas oryzae pv. oryzae

text: oryzae


text: live

text: Pathogen.cl

text: China: Guangxi

text: Oryza sativa

text: bacterial blight

text: rice leaf

text: not collected

text: Xanthomonas oryzae pv. oryzae

text: oryzae


text: live

text: Pathogen.cl

text: China: Hunan

text: Oryza sativa

text: bacterial blight

text: rice leaf

text: not collected

text: Xanthomonas oryzae pv. oryzae

text: oryzae


text: live

text: Pathogen.cl

text: China: Guangdong

text: Oryza sativa

text: bacterial blight

text: rice leaf

text: not collected

text: Xanthomonas oryzae pv. oryzae

text: oryzae

text: IV


text: live

text: Pathogen.cl

text: China: Guangdong

text: Oryza sativa

text: bacterial blight

text: rice leaf

text: not collected

text: Xanthomonas oryzae pv. oryzae

text: oryzae

text: V


text: live

text: Pathogen.cl

text: Philippines: Los Banos, Laguna

text: Oryza sativa

text: bacterial blight

text: rice leaf

text: not collected

text: Xanthomonas oryzae pv. oryzae

text: oryzae


text: live

text: Pathogen.cl

text: Philippines: Davao

text: Oryza sativa

text: bacterial blight

text: rice leaf

text: not collected

text: Xanthomonas oryzae pv. oryzae

text: oryzae


text: live

text: Pathogen.cl

text: Philippines: Calauan, Laguna

text: Oryza sativa

text: bacterial blight

text: rice leaf

text: not collected

text: Xanthomonas oryzae pv. oryzae

text: oryzae


text: live

text: Pathogen.cl

text: Philippines: Palawan

text: Oryza sativa

text: bacterial blight

text: rice leaf

text: not collected

text: Xanthomonas oryzae pv. oryzae

text: oryzae


text: live

text: Pathogen.cl

text: Philippines: Banaue, Ifugao

text: Oryza sativa

text: bacterial blight

text: rice leaf

text: not collected

text: Xanthomonas oryzae pv. oryzae

text: oryzae


text: live

text: Pathogen.cl

text: Philippines: Bontoc, Mountain Province

text: Oryza sativa

text: bacterial blight

text: rice leaf

text: not collected

text: Xanthomonas oryzae pv. oryzae

text: oryzae


text: live

text: Pathogen.cl

text: Philippines: Maabat, Namulditan, Ifugao

text: Oryza sativa

text: bacterial blight

text: rice leaf

text: not collected

text: Xanthomonas oryzae pv. oryzae

text: oryzae


text: live

text: Pathogen.cl

text: Philippines: Mabitac, Laguna

text: Oryza sativa

text: bacterial blight

text: rice leaf

text: not collected

text: Xanthomonas oryzae pv. oryzae

text: oryzae


ControlC

text: Hubei University of Chinese Medicine

text: live

text: Human

text: aortic valve interstitial cells

characteristic: cell type

text: The control

text: No treatment

characteristic: isolate

text: Homo sapiens

text: Cells

characteristic: sample type

text: aortic valve

characteristic: tissue

text: Control RNA-seq


text: Hubei University of Chinese Medicine

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Human

text: aortic valve interstitial cells

text: OM group

text: OM induction

text: Homo sapiens

characteristic: organism

text: Cells

text: aortic valve

text: OM model RNA-seq


characteristic: External Id

text: Hubei University of Chinese Medicine

text: live

characteristic: INSDC status

text: Human

text: aortic valve interstitial cells

text: Drug treatment

text: Drug treatment

text: Homo sapiens

text: Cells

text: aortic valve

text: Treatca RNA-seq

characteristic: title


text: Ningbo University

text: live

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

text: six months old

characteristic: age

text: not collected

characteristic: breed

text: Youyi Zhang

text: gill control 1

characteristic: description

text: Juvenile fish

text: Pampus argenteus

text: pooled male and female

characteristic: sex

text: gill


text: Ningbo University

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

characteristic: SRA accession

text: six months old

text: not collected

text: hujiabao

text: gill test 1

text: Juvenile fish

text: Pampus argenteus

text: pooled male and female

text: gill


text: Ningbo University

text: live

text: Model organism or animal

text: six months old

text: not collected

text: liyaya

text: kidney control 1

text: Juvenile fish

text: Pampus argenteus

text: pooled male and female

text: kidney


text: Ningbo University

text: live

text: Model organism or animal

text: six months old

text: not collected

text: Youyi Zhang

text: kideny test 1

text: Juvenile fish

text: Pampus argenteus

text: pooled male and female

text: kidney


text: Ningbo University

text: live

text: Model organism or animal

text: six months old

text: not collected

text: hujiabao

text: spleen control 1

text: Juvenile fish

text: Pampus argenteus

text: pooled male and female

text: spleen


text: Ningbo University

text: live

text: Model organism or animal

text: six months old

text: not collected

text: liyaya

text: spleen test 1

text: Juvenile fish

text: Pampus argenteus

text: pooled male and female

text: spleen


text: Institut Pasteur

text: live

text: Microbe, viral or environmental

text: WT 30C 2h

characteristic: genotype

text: laboratory

characteristic: host

text: Saccharomyces cerevisiae

text: whole organism

characteristic: sample type

characteristic: strain

text: WT 30C 2h


text: Institut Pasteur

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Scc2 2h 30C

text: laboratory

text: Saccharomyces cerevisiae

characteristic: organism

text: whole organism

text: Scc2 2h 30C


characteristic: External Id

text: Institut Pasteur

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: WT 37C 20min

text: laboratory

text: Saccharomyces cerevisiae

text: whole organism

text: WT 37C 20min

characteristic: title


text: Institut Pasteur

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Scc2 37C 20min

text: laboratory

text: Saccharomyces cerevisiae

text: whole organism

text: Scc2 37C 20min


text: Institut Pasteur

text: live

text: Microbe, viral or environmental

text: WT 2h 37C

text: laboratory

text: Saccharomyces cerevisiae

text: whole organism

text: WT 2h 37C


text: Institut Pasteur

text: live

text: Microbe, viral or environmental

text: Scc2 2h 37C

text: laboratory

text: Saccharomyces cerevisiae

text: whole organism

text: Scc2 2h 37C


text: Institut Pasteur

text: live

text: Microbe, viral or environmental

text: laboratory

text: Saccharomyces cerevisiae

text: whole organism


text: Institut Pasteur

text: live

text: Microbe, viral or environmental

text: WT T0

text: laboratory

text: Saccharomyces cerevisiae

text: whole organism

text: WT T0


text: Institut Pasteur

text: live

text: Microbe, viral or environmental

text: WT T1 +IAA

text: laboratory

text: Saccharomyces cerevisiae

text: whole organism

text: WT T1 +IAA


text: Institut Pasteur

text: live

text: Microbe, viral or environmental

text: Pds5 T0

text: laboratory

text: Saccharomyces cerevisiae

text: whole organism

text: Pds5 T0


text: Institut Pasteur

text: live

text: Microbe, viral or environmental

text: Pds5 T1 +IAA

text: laboratory

text: Saccharomyces cerevisiae

text: whole organism

text: Pds5 T1 +IAA


text: Institut Pasteur

text: live

text: Microbe, viral or environmental

text: WT Fig1

text: laboratory

text: Saccharomyces cerevisiae

text: whole organism

text: WT Fig1


text: Institut Pasteur

text: live

text: Microbe, viral or environmental

text: Eco1-AID +IAA

text: laboratory

text: Saccharomyces cerevisiae

text: whole organism

text: Eco1-AID +IAA


text: Institut Pasteur

text: live

text: Microbe, viral or environmental

text: Hos1delta T0

text: laboratory

text: Saccharomyces cerevisiae

text: whole organism

text: Hos1delta T0


text: Institut Pasteur

text: live

text: Microbe, viral or environmental

text: Hos1delta T1 +IAA

text: laboratory

text: Saccharomyces cerevisiae

text: whole organism

text: Hos1delta T1 +IAA


text: Institut Pasteur

text: live

text: Microbe, viral or environmental

text: Pds5, Hos1 T0

text: laboratory

text: Saccharomyces cerevisiae

text: whole organism

text: Pds5, Hos1 T0


text: Institut Pasteur

text: live

text: Microbe, viral or environmental

text: Pds5, Hos1 T1 +IAA

text: laboratory

text: Saccharomyces cerevisiae

text: whole organism

text: Pds5, Hos1 T1 +IAA


text: Institut Pasteur

text: live

text: Microbe, viral or environmental

text: WT 1h 37C

text: laboratory

text: Saccharomyces cerevisiae

text: whole organism

text: WT 1h 37C


text: Institut Pasteur

text: live

text: Microbe, viral or environmental

text: Scc2 1h37C

text: laboratory

text: Saccharomyces cerevisiae

text: whole organism

text: Scc2 1h37C


text: Institut Pasteur

text: live

text: Microbe, viral or environmental

text: Scc2 1h37C Fig S1

text: laboratory

text: Saccharomyces cerevisiae

text: whole organism

text: Scc2 1h37C Fig S1


text: Institut Pasteur

text: live

text: Microbe, viral or environmental

text: WT 1h 37C Fig S1

text: laboratory

text: Saccharomyces cerevisiae

text: whole organism

text: WT 1h 37C Fig S1


text: Institut Pasteur

text: live

text: Microbe, viral or environmental

text: Smc3 WT,Smc3_AID

text: laboratory

text: Saccharomyces cerevisiae

text: whole organism

text: Smc3 WT,Smc3_AID


text: Institut Pasteur

text: live

text: Microbe, viral or environmental

text: Smc3 RR, Smc3-AID

text: laboratory

text: Saccharomyces cerevisiae

text: whole organism

text: Smc3 RR, Smc3-AID


text: Institut Pasteur

text: live

text: Microbe, viral or environmental

text: laboratory

text: Saccharomyces cerevisiae

text: whole organism


text: Institut Pasteur

text: live

text: Microbe, viral or environmental

text: WT Fig2

text: laboratory

text: Saccharomyces cerevisiae

text: whole organism

text: WT Fig2


text: Institut Pasteur

text: live

text: Microbe, viral or environmental

text: Eco1-AID + IAA

text: laboratory

text: Saccharomyces cerevisiae

text: whole organism

text: Eco1-AID + IAA


text: Institut Pasteur

text: live

text: Microbe, viral or environmental

text: WT +IAA

text: laboratory

text: Saccharomyces cerevisiae

text: whole organism

text: WT +IAA


text: Jawaharlal Nehru University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: India: Srinagar, Jammu and Kashmir

characteristic: geo loc name

text: agricultural soil

characteristic: isolation source

text: Pseudomonas sp. CK-NBRI-02

text: microbe

text: Nacl treated P2 biological replicate 1


text: Jawaharlal Nehru University

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

text: India: Srinagar, Jammu and Kashmir

text: agricultural soil

text: Pseudomonas sp. CK-NBRI-02

text: microbe

text: Nacl treated P2 biological replicate 2


text: Jawaharlal Nehru University

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: India: Srinagar, Jammu and Kashmir

text: agricultural soil

text: Pseudomonas sp. CK-NBRI-02

text: microbe

text: P2 biological replicate 1


text: Jawaharlal Nehru University

text: live

text: Microbe, viral or environmental

text: India: Badaun (midwestern plain zone) region of Uttar Pradesh

text: agricultural soil

text: Rossellomorea marisflavi

text: microbe

text: P3 biological replicate 1


text: Jawaharlal Nehru University

text: live

text: Microbe, viral or environmental

text: India: Srinagar, Jammu and Kashmir

text: agricultural soil

text: Pseudomonas sp. CK-NBRI-02

text: microbe

text: P2 biological replicate 2


text: Jawaharlal Nehru University

text: live

text: Microbe, viral or environmental

text: agricultural soil

text: Rossellomorea marisflavi

text: microbe

text: Nacl treated P3 biological replicate 1


text: Jawaharlal Nehru University

text: live

text: Microbe, viral or environmental

text: agricultural soil

text: Rossellomorea marisflavi

text: microbe

text: NaCl treated P3 biological replicate 2


text: Jawaharlal Nehru University

text: live

text: Microbe, viral or environmental

text: agricultural soil

text: Rossellomorea marisflavi

text: microbe

text: P3 biological replicate 2


text: veterinary clinical/research| poultry

characteristic: IFSAC+ Category

text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.env

text: environmental/food/other

text: South Carolina Department of Health

characteristic: collected by

text: USA:SC

text: caecum chicken

text: caecum:uberon_0001153| chicken:foodon_03411457

characteristic: ontological term

text: Escherichia coli

text: GenomeTrakr; LFFM-FY1

text: South Carolina Department of Health and Environmental Control

text: animal

characteristic: source type

text: Pathogen: environmental/food/other sample from Escherichia coli


text: NCCHD

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Model organism or animal

text: 6 to 7 weeks

characteristic: age

text: Miwa Morita

characteristic: biomaterial provider

text: Charles River, USA

characteristic: birth location

text: survival days 6

characteristic: description

text: no

characteristic: disease

characteristic: genotype

text: USA

text: healthy

text: Mus musculus

text: male

characteristic: sex

characteristic: strain

text: liver

characteristic: tissue

text: Model organism or animal sample from Mus musculus