text: The University of Queensland

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: 363 m

text: Sweden: Stordalen Mire

characteristic: isolate

text: permafrost active layer soil

text: 68.3533 N 19.0467 E

characteristic: lat lon

text: peat metagenome

characteristic: metagenome source

characteristic: metagenomic

text: note

text: Gemmatimonadota bacterium

text: metagenomic assembly

text: MAG Gemmatimonadetes_fen_1250 from metagenome 20120800_E2X


status: PUBLIC

characteristic: External Id

text: The University of Queensland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: 363 m

tag: attribute

characteristic: altitude

characteristic: collection date

characteristic: depth

characteristic: environmental sample

text: Sweden: Stordalen Mire

characteristic: geo loc name

text: permafrost active layer soil

characteristic: isolation source

text: 68.3534 N 19.0468 E

text: peat metagenome

text: note

characteristic: name

text: Ignavibacteriota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: MAG Ignavibacteriae_fen_1300 from metagenome 20120800_E3D

characteristic: title

text: This BioSample is a metagenomic assembly obtained from the 20120800_E3D metagenome BioSample: SAMN07125094.

characteristic: value


text: The University of Queensland

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: 363 m

text: Sweden: Stordalen Mire

characteristic: isolate

text: permafrost active layer soil

text: 68.3534 N 19.0468 E

characteristic: lat lon

text: peat metagenome

characteristic: metagenome source

characteristic: metagenomic

text: note

text: Acidobacteriota bacterium

text: metagenomic assembly

text: MAG Acidobacteria_fen_414 from metagenome 20120800_E3D


characteristic: External Id

text: The University of Queensland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: 363 m

characteristic: altitude

text: Sweden: Stordalen Mire

text: permafrost active layer soil

text: 68.3534 N 19.0468 E

text: peat metagenome

text: note

text: Chloroflexota bacterium

text: metagenomic assembly

text: MAG Chloroflexi_fen_1076 from metagenome 20120800_E3S

text: This BioSample is a metagenomic assembly obtained from the 20120800_E3S metagenome BioSample: SAMN07125092.


text: The University of Queensland

text: live

text: Microbe, viral or environmental

text: 363 m

characteristic: collection date

characteristic: depth

characteristic: environmental sample

text: Sweden: Stordalen Mire

characteristic: geo loc name

text: permafrost active layer soil

characteristic: isolation source

text: 68.3534 N 19.0468 E

text: peat metagenome

text: note

characteristic: name

text: Caldisericota bacterium

text: metagenomic assembly

text: MAG Caldiserica_fen_1012 from metagenome 20120800_E3X

text: This BioSample is a metagenomic assembly obtained from the 20120800_E3X metagenome BioSample: SAMN07125095.


text: The University of Queensland

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: 363 m

text: Sweden: Stordalen Mire

text: permafrost active layer soil

text: 68.3534 N 19.0468 E

text: peat metagenome

text: note

text: Candidatus Omnitrophota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: MAG Omnitrophica_fen_1321 from metagenome 20120800_E3X

characteristic: title

characteristic: value


characteristic: External Id

text: The University of Queensland

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: 363 m

text: Sweden: Stordalen Mire

characteristic: isolate

text: permafrost active layer soil

text: 68.3534 N 19.0468 E

characteristic: lat lon

text: peat metagenome

characteristic: metagenome source

characteristic: metagenomic

text: note

text: Candidatus Omnitrophota bacterium

text: metagenomic assembly

text: MAG Omnitrophica_fen_1322 from metagenome 20120800_E3X


text: The University of Queensland

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: 363 m

characteristic: altitude

characteristic: collection date

characteristic: depth

text: Sweden: Stordalen Mire

text: permafrost active layer soil

text: 68.3534 N 19.0468 E

text: peat metagenome

text: note

text: Elusimicrobiota bacterium

text: metagenomic assembly

text: MAG Elusimicrobia_fen_1177 from metagenome 20120800_E3X


text: The University of Queensland

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: 363 m

characteristic: environmental sample

text: Sweden: Stordalen Mire

characteristic: geo loc name

text: permafrost active layer soil

characteristic: isolation source

text: 68.3534 N 19.0468 E

text: peat metagenome

text: note

characteristic: name

text: Chloroflexota bacterium

text: metagenomic assembly

text: MAG Chloroflexi_fen_1079 from metagenome 20120800_E3X


characteristic: External Id

text: The University of Queensland

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: 363 m

text: Sweden: Stordalen Mire

text: permafrost active layer soil

text: 68.3534 N 19.0468 E

text: peat metagenome

text: note

text: Gemmatimonadota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: MAG Gemmatimonadetes_fen_1251 from metagenome 20120800_E3X

characteristic: title

characteristic: value


text: The University of Queensland

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: 363 m

text: Sweden: Stordalen Mire

characteristic: isolate

text: permafrost active layer soil

text: 68.3534 N 19.0468 E

characteristic: lat lon

text: peat metagenome

characteristic: metagenome source

characteristic: metagenomic

text: note

text: Caldisericota bacterium

text: metagenomic assembly

text: MAG Caldiserica_fen_1013 from metagenome 20120800_E3X


text: The University of Queensland

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 363 m

characteristic: altitude

characteristic: collection date

characteristic: depth

text: Sweden: Stordalen Mire

text: permafrost active layer soil

text: 68.3535 N 19.0474 E

text: peat metagenome

text: note

text: Gemmatimonadota bacterium

text: metagenomic assembly

text: MAG Gemmatimonadetes_palsa_1252 from metagenome 20120800_P2D

text: This BioSample is a metagenomic assembly obtained from the 20120800_P2D metagenome BioSample: SAMN07125070.


characteristic: External Id

text: The University of Queensland

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: 363 m

characteristic: environmental sample

text: Sweden: Stordalen Mire

characteristic: geo loc name

text: permafrost active layer soil

characteristic: isolation source

text: 68.3535 N 19.0472 E

text: peat metagenome

text: note

characteristic: name

text: Acidobacteriota bacterium

text: metagenomic assembly

text: MAG Acidobacteria_palsa_425 from metagenome 20120800_P3M

text: This BioSample is a metagenomic assembly obtained from the 20120800_P3M metagenome BioSample: SAMN07125071.


text: The University of Queensland

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: 363 m

text: Sweden: Stordalen Mire

text: permafrost active layer soil

text: 68.3533 N 19.0475 E

text: peat metagenome

text: note

text: Verrucomicrobiota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: MAG Verrucomicrobia_bog_1472 from metagenome 20120800_S1X

characteristic: title

text: This BioSample is a metagenomic assembly obtained from the 20120800_S1X metagenome BioSample: SAMN07125075.

characteristic: value


text: The University of Queensland

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: 363 m

text: Sweden: Stordalen Mire

characteristic: isolate

text: permafrost active layer soil

text: 68.3533 N 19.0475 E

characteristic: lat lon

text: peat metagenome

characteristic: metagenome source

characteristic: metagenomic

text: note

text: Bacteroidota bacterium

text: metagenomic assembly

text: MAG Bacteroidetes_bog_985 from metagenome 20120800_S2D

text: This BioSample is a metagenomic assembly obtained from the 20120800_S2D metagenome BioSample: SAMN07125078.


characteristic: External Id

text: Wuhan university

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: collection date

text: Aquilaria sinensis

characteristic: cultivar

text: Microbial metagenome isolated from agawood of aquilaria sinensis

characteristic: description

text: mature

characteristic: dev stage

text: China:Hainan Province,Haikou

text: Aquilaria sinensis (Loureiro) Sprengel

characteristic: host

text: resin

text: Terriglobales

text: tissue sample

text: resin

characteristic: tissue

text: Microbe sample from Acidobacteriales


name: Ginkgo biloba-associated microbial communities

text: Wuhan university

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: Rhizosphere and endosphere microbial communities from ginkgo biloba

text: China:Hubei Province,Anlu

characteristic: geo loc name

text: Ginkgo biloba

text: root

text: Terriglobales

characteristic: organism

text: tissue sample

characteristic: sample type

text: Microbe sample from Acidobacteriales

characteristic: title


Gymnarchus niloticus

characteristic: External Id

text: Iridian Genomes

characteristic: INSDC center name

text: live

text: Model organism or animal

characteristic: NCBI submission model

text: adult

text: CUMV 94655

characteristic: isolate

text: wild caught

characteristic: isolation source

characteristic: specimen voucher

text: muscle

text: Model organism or animal sample from Gymnarchus niloticus


Myomyrus macrops

text: Iridian Genomes

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

characteristic: SRA accession

text: adule

text: IRGN EQXDW84EHZ

text: wild caught

text: Myomyrus macrops

text: muscle

text: Model organism or animal sample from Myomyrus macrops


Petrocephalus microphthalmus

text: Iridian Genomes

text: live

text: Model organism or animal

text: adult

characteristic: dev stage

text: CUMV 97508

text: wild caught

text: Petrocephalus microphthalmus

text: muscle

text: Model organism or animal sample from Petrocephalus microphthalmus


text: Institute of Plant Protection, Chinese Academy of Agricultural Sciences

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: altitude

characteristic: collection date

text: China

text: soil

text: Streptomyces noursei

text: metabolism gene cluster

text: strain CK-15

characteristic: strain

text: nystatin gene cluster isolated from streptomyces albulus


text: Duke University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: Botswana: Gaborone

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: Nasopharyngeal swab

text: nasopharynx

text: Metagenome or environmental sample from human nasopharyngeal metagenome


characteristic: External Id

text: Duke University

characteristic: INSDC center name

text: live

text: Metagenome or environmental

text: Botswana: Gaborone

text: Homo sapiens

text: Nasopharyngeal swab

text: nasopharynx

text: human nasopharyngeal metagenome

characteristic: organism

characteristic: title


Petrocephalus sullivani

text: Iridian Genomes

text: live

text: Model organism or animal

characteristic: NCBI submission model

text: adult

text: IRGN 74BW3M4VE5

characteristic: isolate

text: wild caught

characteristic: isolation source

text: Petrocephalus sullivani

text: muscle

characteristic: tissue

text: Model organism or animal sample from Petrocephalus sullivani


Orthanthera albida_255_S12

text: Hobart and William Smith Colleges

characteristic: INSDC secondary accession

text: live

text: Plant

characteristic: NCBI submission package

characteristic: SRA accession

text: mature

characteristic: dev stage

text: Leptadenia albida

text: OKLA: Fishbein 6583

characteristic: specimen voucher

text: leaf

text: Plant sample from Leptadenia albida


Chromulinavorax destructans

text: University of British Columbia

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Christoph Deeg

characteristic: collected by

characteristic: collection date

text: Intracellular pathogen of Spumella elongata CCAP 955/1. Candidate phylum TM6

characteristic: description

text: fresh water

characteristic: env biome

text: Canada

text: Spumella elongata

text: Christoph Deeg

characteristic: identified by

text: Spumella elongata CCAP 955/1

characteristic: lab host

text: Candidatus Chromulinivorax destructor

text: mixed culture

characteristic: sample type

characteristic: strain

text: Chromulinavorax destructans str. SeV1

text: reference material of Candidatus Chromulinivorax destructor

characteristic: type-material


characteristic: External Id

text: Instituto de Quimica

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: completeness

characteristic: coverage

text: TRUE

characteristic: environmental sample

text: Brazil: Sao Paulo

characteristic: geo loc name

characteristic: isolate

text: ZC4 (Zoo Composter number 4) at the Sao Paulo Zoo

characteristic: isolation source

text: 23.6265 S 46.6198 W

characteristic: lat lon

text: compost metagenome

characteristic: metagenome source

text: TRUE

characteristic: metagenomic

text: This biosample is a metagenomic assembly obtained from the compost metagenome BioSample: SAMN04620138

characteristic: note

text: Bacillota bacterium

characteristic: organism

text: metagenomic assembly

text: RG06 Firmicutes recovered from ZC4 composting metagenome

characteristic: title


text: Instituto de Quimica

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: collection date

text: TRUE

text: Brazil: Sao Paulo

text: 23.6265 S 46.6198 W

text: compost metagenome

text: TRUE

text: Bacillota bacterium

text: metagenomic assembly

characteristic: sample type

text: RG05 Firmicutes recovered from ZC4 composting metagenome


characteristic: External Id

text: Instituto de Quimica

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: completeness

text: TRUE

text: Brazil: Sao Paulo

text: 23.6265 S 46.6198 W

text: compost metagenome

text: TRUE

text: Bacillota bacterium

text: metagenomic assembly

text: RG03 Firmicutes recovered from ZC4 composting metagenome


text: Instituto de Quimica

text: live

text: Microbe, viral or environmental

characteristic: coverage

text: TRUE

characteristic: environmental sample

text: Brazil: Sao Paulo

characteristic: geo loc name

characteristic: isolate

characteristic: isolation source

text: 23.6265 S 46.6198 W

text: compost metagenome

text: TRUE

text: Bacillota bacterium

text: metagenomic assembly

text: RG09 Firmicutes recovered from ZC4 composting metagenome


text: Instituto de Quimica

text: live

text: Microbe, viral or environmental

text: TRUE

text: Brazil: Sao Paulo

text: 23.6265 S 46.6198 W

characteristic: lat lon

text: compost metagenome

characteristic: metagenome source

text: TRUE

characteristic: metagenomic

characteristic: note

text: Bacillota bacterium

characteristic: organism

text: metagenomic assembly

text: RG07 Firmicutes recovered from ZC4 composting metagenome


text: Instituto de Quimica

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: collection date

text: TRUE

text: Brazil: Sao Paulo

text: 23.6265 S 46.6198 W

text: compost metagenome

text: TRUE

text: Bacillota bacterium

text: metagenomic assembly

text: RG11 Firmicutes recovered from ZC4 composting metagenome

characteristic: title


characteristic: External Id

text: Instituto de Quimica

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: TRUE

text: Brazil: Sao Paulo

text: 23.6265 S 46.6198 W

text: compost metagenome

text: TRUE

text: Bacillota bacterium

text: metagenomic assembly

characteristic: sample type

text: RG10 Firmicutes recovered from ZC4 composting metagenome


text: Instituto de Quimica

text: live

text: Microbe, viral or environmental

characteristic: completeness

characteristic: coverage

text: TRUE

characteristic: environmental sample

text: Brazil: Sao Paulo

characteristic: geo loc name

characteristic: isolate

text: 23.6265 S 46.6198 W

text: compost metagenome

text: TRUE

text: Bacillota bacterium

text: metagenomic assembly

text: RG18 Firmicutes recovered from ZC4 composting metagenome


text: Northwest A&F University

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: China

text: Soil

characteristic: host

text: bulk soil

text: Loess Plateau

characteristic: isolation source

text: Bacillus sp. (in: firmicutes)

text: Soil

text: Firmicutes

characteristic: strain

text: Microbe sample from Bacillus sp. (in: firmicutes)


text: Northwest A&F University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: China

text: Soil aggregate

text: bulk soil

text: Loess Plateau

text: Gemmatimonadota bacterium

characteristic: organism

text: Soil

text: Gemmatimonadetes

text: Microbe sample from Gemmatimonadota bacterium


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission package

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Blood

characteristic: body site

text: HMB-PUB

text: No

characteristic: is tumor

text: SNP/CNV Genotypes (NGS)

characteristic: molecular data type

text: Homo sapiens

text: female

characteristic: sex

text: Case Set

characteristic: study design

characteristic: study name

text: No

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Non-tumor DNA sample from Blood of a human female participant in the dbGaP study DRIVE Breast Cancer Whole Genome Sequencing

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: DNA

text: Blood

text: HMB-PUB

text: No

text: SNP/CNV Genotypes (NGS)

text: Homo sapiens

characteristic: organism

text: female

text: Case Set

text: DRIVE Breast Cancer Whole Genome Sequencing

text: No


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission package

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Blood

characteristic: body site

text: DS-CA-PUB

text: No

characteristic: is tumor

text: SNP/CNV Genotypes (NGS)

characteristic: molecular data type

text: Homo sapiens

text: female

text: Case Set

text: No


text: dbGaP

text: live

text: Generic

text: DNA

text: Blood

text: DS-CA-PUB

text: No

text: SNP/CNV Genotypes (NGS)

text: Homo sapiens

text: female

characteristic: sex

text: Case Set

characteristic: study design

text: Breast Neoplasms

characteristic: study disease

characteristic: study name

text: Yes

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: DNA

text: Blood

text: HMB-PUB

text: No

text: SNP/CNV Genotypes (NGS)

text: Homo sapiens

characteristic: organism

text: female

text: Case Set

text: Breast Neoplasms

text: Yes


text: Northwest A&F University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: China

characteristic: geo loc name

text: Soil

characteristic: host

text: bulk soil

characteristic: isolate

text: Loess Plateau

characteristic: isolation source

text: Soil

characteristic: sample type

text: Basidiomycota

characteristic: strain

text: Microbe sample from Cryptococcus sp. (in: basidiomycete fungi)


text: Institute of Deep-Sea Science and Engineering, Chinese Academy of Sciences

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: TRUE

characteristic: environmental sample

characteristic: isolate-name-alias

text: marine water

text: marine metagenome

characteristic: metagenome source

text: TRUE

characteristic: metagenomic

text: Nitrososphaerota archaeon

text: metagenomic assembly

text: Microbe sample from Nitrososphaerota archaeon

characteristic: title


characteristic: External Id

text: The James Hutton Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.host-associated

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Mining area

characteristic: env biome

text: Mine

characteristic: env feature

text: Soil

text: China: Dabaoshan Mine, Qujiang District, Shaoguan Prefecture, Guangdong Province

text: 24.527 N 113.714 E

characteristic: lat lon

text: missing data

text: Trinickia dabaoshanensis

text: Trinickia dabaoshanensis

characteristic: organism_new name

text: Estrada de Los Santos et al. (2018)

text: MIGS Cultured Bacterial/Archaeal sample from Trinickia dabaoshanensis

text: type strain of Trinickia dabaoshanensis

characteristic: type-material


text: University of Illinois at Urbana-Champaign

text: live

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:6.0

text: drinking water system-raw water

text: oligotrophic fast flowing

text: water

text: TRUE

characteristic: environmental sample

text: USA: Illinois, Champaign

characteristic: geo loc name

characteristic: isolate

text: drinking water system-raw water

characteristic: isolation-source

text: 40.13 N 88.36 W

text: freshwater metagenome

text: TRUE

text: This BioSample is a metagenomic assembly obtained from the freshwater metagenome BioSample: SAMN05159392

characteristic: note

text: Syntrophus sp. (in: bacteria)

characteristic: organism

text: metagenomic assembly

characteristic: sample-type

text: MIGS Cultured Bacterial/Archaeal sample from Syntrophus sp. (in: bacteria)


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: drinking water system-raw water

text: oligotrophic fast flowing

text: water

text: TRUE

text: USA: Illinois, Champaign

text: drinking water system-raw water

text: 40.13 N 88.36 W

text: freshwater metagenome

characteristic: metagenome source

text: TRUE

characteristic: metagenomic

text: Verrucomicrobiota bacterium

text: metagenomic assembly

text: MIGS Cultured Bacterial/Archaeal sample from Verrucomicrobiota bacterium

characteristic: title


text: live

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: drinking water system-PB1

characteristic: env biome

text: oligotrophic fast flowing

characteristic: env feature

text: water

text: TRUE

text: USA: Illinois, Champaign

text: drinking water system-PB1

text: 40.07 N 88.30 W

characteristic: lat lon

text: freshwater metagenome

text: TRUE

text: This BioSample is a metagenomic assembly obtained from the freshwater metagenome BioSample: SAMN05159411

text: metagenomic assembly

text: MIGS Cultured Bacterial/Archaeal sample from Gordonia sp. (in: high G+C Gram-positive bacteria)


text: live

text: MIGS.ba

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:6.0

text: drinking water system-PB2

text: oligotrophic fast flowing

text: water

text: TRUE

characteristic: environmental sample

text: USA: Illinois, Champaign

characteristic: geo loc name

characteristic: isolate

text: drinking water system-PB2

characteristic: isolation-source

text: 40.12 N 88.23 W

text: freshwater metagenome

text: TRUE

text: This BioSample is a metagenomic assembly obtained from the freshwater metagenome BioSample: SAMN05159412

characteristic: note

text: Leptothrix sp. (in: b-proteobacteria)

text: metagenomic assembly

text: MIGS Cultured Bacterial/Archaeal sample from Leptothrix sp. (in: b-proteobacteria)


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: drinking water system-PR

text: oligotrophic fast flowing

text: water

text: TRUE

text: USA: Illinois, Champaign

text: drinking water system-PR

text: 40.11 N 88.23 W

text: freshwater metagenome

text: TRUE

text: This BioSample is a metagenomic assembly obtained from the freshwater metagenome BioSample: SAMN05159414

text: Leptothrix sp. (in: b-proteobacteria)

characteristic: organism

text: metagenomic assembly

characteristic: sample-type


name: CIM:MAG 1059

text: Mayo Clinic

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: human digestive tract

text: USA:Minnesota, Rochester

text: Homo sapiens

characteristic: host

text: faeces

text: CIM:MAG 1059

text: feces

text: 44.0234 N 92.46295 W

text: human gut metagenome

characteristic: metagenome source

characteristic: metagenomic

text: This biosample is a metagenomic assembly obtained from the human gut metagenome BioSample: SAMN07452475 SAMN07452476 SAMN07452477 SAMN07452478 SAMN07452479 SAMN07452480 SAMN07452481 SAMN07452482 SAMN07452483 SAMN07452484 SAMN07452485 SAMN07452486 SAMN07452487 SAMN07452488 SAMN07452489 SAMN07452490 SAMN07452491 SAMN07452492 SAMN07452493 SAMN07452494 SAMN07452495 SAMN07452496

text: Bacillota bacterium

characteristic: sample alias

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Bacillota bacterium

characteristic: title


name: CIM:MAG 1073

text: Mayo Clinic

text: live

text: Microbe, viral or environmental

text: human digestive tract

characteristic: env biome

characteristic: environmental sample

text: USA:Minnesota, Rochester

characteristic: geo loc name

text: Homo sapiens

text: faeces

text: CIM:MAG 1073

characteristic: isolate

text: feces

characteristic: isolation-source

text: 44.0234 N 92.46295 W

characteristic: lat lon

text: human gut metagenome

text: Lentisphaerota bacterium

text: metagenomic assembly

text: Microbe sample from Lentisphaerota bacterium


name: CIM:MAG 1227

characteristic: External Id

text: Mayo Clinic

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: human digestive tract

text: USA:Minnesota, Rochester

text: Homo sapiens

text: faeces

text: CIM:MAG 1227

text: feces

text: 44.0234 N 92.46295 W

text: human gut metagenome

characteristic: note

text: Bacillota bacterium

characteristic: organism

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: CIM:MAG 1237

text: Mayo Clinic

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: human digestive tract

text: USA:Minnesota, Rochester

text: Homo sapiens

characteristic: host

text: faeces

text: CIM:MAG 1237

text: feces

text: 44.0234 N 92.46295 W

text: human gut metagenome

characteristic: metagenome source

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: CIM:MAG 1451

text: Mayo Clinic

text: live

text: Microbe, viral or environmental

text: human digestive tract

characteristic: env biome

text: USA:Minnesota, Rochester

text: Homo sapiens

text: faeces

text: CIM:MAG 1451

text: feces

text: 44.0234 N 92.46295 W

text: human gut metagenome

characteristic: metagenomic

text: Verrucomicrobiota bacterium

characteristic: sample alias

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Verrucomicrobiota bacterium

characteristic: title


name: CIM:MAG 721

text: Mayo Clinic

text: live

text: Microbe, viral or environmental

text: human digestive tract

characteristic: environmental sample

text: USA:Minnesota, Rochester

characteristic: geo loc name

text: Homo sapiens

text: faeces

text: CIM:MAG 721

characteristic: isolate

text: feces

characteristic: isolation-source

text: 44.0234 N 92.46295 W

characteristic: lat lon

text: human gut metagenome

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: CIM:MAG 792_1

characteristic: External Id

text: Mayo Clinic

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: human digestive tract

text: USA:Minnesota, Rochester

text: Homo sapiens

text: faeces

text: CIM:MAG 792_1

text: feces

text: 44.0234 N 92.46295 W

text: human gut metagenome

characteristic: note

text: Verrucomicrobiota bacterium

text: metagenomic assembly


name: CIM:MAG 959

text: Mayo Clinic

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: human digestive tract

text: USA:Minnesota, Rochester

text: Homo sapiens

characteristic: host

text: faeces

text: CIM:MAG 959

text: feces

text: 44.0234 N 92.46295 W

text: human gut metagenome

text: Bacillota bacterium

characteristic: organism

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


Opercularia sp.

text: Institute of hydrobiology

characteristic: INSDC secondary accession

text: live

text: Invertebrate

characteristic: SRA accession

characteristic: collection date

text: China:Wuhan

text: freshwater lake

characteristic: isolation source

text: Opercularia sp. (in: ciliates)

text: whole cell

characteristic: tissue

text: Invertebrate sample from Opercularia sp. (in: ciliates)


text: Massachusetts Institute of Technology

text: live

text: Microbe, viral or environmental

characteristic: Tax ID

text: Well ID: FW-305, Sequencing ID: D17-102242

characteristic: description

text: USA: Tennessee, Oak Ridge Field Research Center

characteristic: geo loc name

text: groundwater

text: Pseudomonas sp. FW305-3-2-15-C-TSA3

text: Draft genome assembly

characteristic: sample type

characteristic: sequencing id

characteristic: strain

characteristic: title

characteristic: well


characteristic: External Id

text: Massachusetts Institute of Technology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: Well ID: FW-305, Sequencing ID: D17-102244

text: groundwater

text: Pseudomonas sp. FW305-3-2-15-C-R2A1

text: Draft genome assembly


text: Massachusetts Institute of Technology

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: Well ID: FW-305, Sequencing ID: D17-102245

text: groundwater

text: Pseudomonas sp. FW305-3-2-15-C-TSA2

characteristic: organism

text: Draft genome assembly


text: Massachusetts Institute of Technology

text: live

text: Microbe, viral or environmental

characteristic: Tax ID

text: Well ID: FW-305, Sequencing ID: D17-102243

text: groundwater

characteristic: isolation source

text: Pseudomonas sp. FW305-3-2-15-C-LB1

text: Draft genome assembly


text: Massachusetts Institute of Technology

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: Well ID: FW-305, Sequencing ID: D17-102241

characteristic: description

characteristic: geo loc name

text: groundwater

text: Pseudomonas sp. FW305-3-2-15-C-LB3

text: Draft genome assembly


text: Massachusetts Institute of Technology

text: live

text: Microbe, viral or environmental

text: Well ID: FW-305, Sequencing ID: D17-102236

text: groundwater

text: Pseudomonas sp. FW305-3-2-15-A-LB2

text: Draft genome assembly

characteristic: sample type

characteristic: sequencing id

characteristic: strain


characteristic: External Id

text: Massachusetts Institute of Technology

text: live

text: Microbe, viral or environmental

text: Well ID: GW-456, Sequencing ID: D17-102197

text: groundwater

text: Pseudomonas sp. GW456-12-10-14-TSB6

text: Draft genome assembly

characteristic: title

characteristic: well


text: Massachusetts Institute of Technology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Well ID: GW-456, Sequencing ID: D17-102195

text: groundwater

text: Pseudomonas sp. GW456-12-1-14-TSB1

text: Draft genome assembly


text: Massachusetts Institute of Technology

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: Well ID: GW-456, Sequencing ID: D17-102194

text: groundwater

text: Pseudomonas sp. GW456-11-11-14-TSB2

text: Draft genome assembly


text: Massachusetts Institute of Technology

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

characteristic: Tax ID

text: Well ID: FW-305, Sequencing ID: D17-102237

text: groundwater

text: Pseudomonas sp. FW305-3-2-15-A-R2A1

characteristic: organism

text: Draft genome assembly


text: Massachusetts Institute of Technology

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: Well ID: FW-305, Sequencing ID: D17-102224

characteristic: description

text: groundwater

characteristic: isolation source

text: Pseudomonas sp. FW305-70

text: Draft genome assembly


text: Massachusetts Institute of Technology

text: live

text: Microbe, viral or environmental

text: Well ID: FW-305, Sequencing ID: D17-102235

characteristic: geo loc name

text: groundwater

text: Pseudomonas sp. FW305-60

text: Draft genome assembly

characteristic: sample type

characteristic: sequencing id


characteristic: External Id

text: Massachusetts Institute of Technology

text: live

text: Microbe, viral or environmental

text: Well ID: FW-305, Sequencing ID: D17-102217

text: groundwater

text: Pseudomonas sp. FW305-33

text: Draft genome assembly

characteristic: strain

characteristic: title


text: Massachusetts Institute of Technology

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: Well ID: FW-305, Sequencing ID: D17-102220

text: groundwater

text: Pseudomonas sp. FW305-76

text: Draft genome assembly

characteristic: well


text: Ondokuz Mayis University

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: Hilal Ay

characteristic: collected by

characteristic: collection date

text: Turkey:Isparta

text: soil

text: Jiangella anatolica

text: pure culture

text: Microbe sample from Jiangella anatolica

text: type strain of Jiangella anatolica

characteristic: type-material


Jishengella endophytica DSM 45430

text: Ondokuz Mayis University

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: China:Hainan Province

text: plant tissue

text: Micromonospora endophytica

characteristic: organism

text: pure culture

text: DSM 45430

text: Microbe sample from Micromonospora endophytica

text: type strain of Jishengella endophytica

characteristic: type material


name: Western Arctic Ocean (Canada Basin) MAG-Walsh-SAR202-VII-2

text: Concordia University

text: live

text: Microbe, viral or environmental

characteristic: enviromental-sample

text: Arctic Ocean:Beaufort Sea

characteristic: geo loc name

characteristic: isolate

text: marine waters

characteristic: isolation source

text: 75.235 N 150.069 W

characteristic: lat lon

text: marine metagenome

characteristic: metagenome source

characteristic: metagenomic

text: This BioSample is a metagenomic assembly obtained from the marine metagenome BioSample: SAMN08783930

characteristic: note

text: Chloroflexota bacterium

text: metagenome assembled genome

characteristic: sample type

text: Microbe sample from Chloroflexota bacterium


characteristic: External Id

text: UW-Madison

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: SRA accession

characteristic: culture collection

text: USA: Madison, Wisconsin

text: Cyberlindnera xylosilytica

text: cell culture

text: NRRL YB-2097

characteristic: strain

text: Microbe sample from Cyberlindnera xylosilytica

characteristic: title

text: holotype of Cyberlindnera xylosilytica


text: UW-Madison

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: collection date

text: USA: Madison, Wisconsin

characteristic: geo loc name

text: Tetrapisispora fleetii

characteristic: organism

text: cell culture

text: NRRL Y-27350

text: Microbe sample from Tetrapisispora fleetii

text: culture from holotype of Tetrapisispora fleetii

characteristic: type material


Pseudomonas MWU14-2217

text: Midwestern University

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: USA: Massachusetts, cape cod national seashore

text: cranberry

characteristic: host

text: soil from cranberry bog

characteristic: isolation source

text: Aquitalea palustris

text: soil

text: Microbe sample from Aquitalea palustris

text: type strain of Aquitalea palustris

characteristic: type-material


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: liver

characteristic: body site

text: DS-CA

text: hepatocellular carcinoma

characteristic: histological type

text: Yes

characteristic: is tumor

text: Homo sapiens

text: female

characteristic: sex

text: Case Set

characteristic: study design

text: Carcinoma, Hepatocellular

characteristic: study disease

text: Genomics of Hepatocellular Carcinoma

characteristic: study name

text: Yes

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Carcinoma, Hepatocellular tumor DNA sample from liver of a human female participant in the dbGaP study Genomics of Hepatocellular Carcinoma


characteristic: External Id

text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

text: liver

text: DS-CA

text: hepatocellular carcinoma

text: Yes

text: Homo sapiens

characteristic: organism

text: male

text: Case Set

text: Carcinoma, Hepatocellular

text: Genomics of Hepatocellular Carcinoma

text: Yes

text: Carcinoma, Hepatocellular tumor DNA sample from liver of a human male participant in the dbGaP study Genomics of Hepatocellular Carcinoma

characteristic: title


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: liver

characteristic: body site

text: DS-CA

text: hepatocellular carcinoma

characteristic: histological type

text: No

characteristic: is tumor

text: Homo sapiens

text: male

characteristic: sex

text: Case Set

text: Carcinoma, Hepatocellular

text: Genomics of Hepatocellular Carcinoma

text: Yes

text: Non-tumor DNA sample from liver of a human male participant in the dbGaP study Genomics of Hepatocellular Carcinoma


characteristic: External Id

text: dbGaP

characteristic: INSDC last update

text: live

text: Generic

text: DNA

text: liver

text: DS-CA

text: hepatocellular carcinoma

text: Yes

text: Homo sapiens

text: Case Set

characteristic: study design

text: Carcinoma, Hepatocellular

characteristic: study disease

text: Genomics of Hepatocellular Carcinoma

characteristic: study name

text: Yes

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Carcinoma, Hepatocellular tumor DNA sample from liver of a human participant in the dbGaP study Genomics of Hepatocellular Carcinoma


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

text: liver

text: DS-CA

text: Non-malignant

text: No

text: Homo sapiens

characteristic: organism

text: female

text: Case Set

text: Carcinoma, Hepatocellular

text: Genomics of Hepatocellular Carcinoma

text: Yes

text: Non-tumor DNA sample from liver of a human female participant in the dbGaP study Genomics of Hepatocellular Carcinoma

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC last update

text: live

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: liver

characteristic: body site

text: DS-CA

text: Non-malignant

characteristic: histological type

text: No

characteristic: is tumor

text: Homo sapiens

text: male

characteristic: sex

text: Case Set

text: Carcinoma, Hepatocellular

text: Genomics of Hepatocellular Carcinoma

text: Yes


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: DNA

text: liver

text: DS-CA

text: hepatocellular carcinoma

text: No

text: Homo sapiens

text: female

text: Case Set

characteristic: study design

text: Carcinoma, Hepatocellular

characteristic: study disease

text: Genomics of Hepatocellular Carcinoma

characteristic: study name

text: Yes

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle


characteristic: External Id

text: dbGaP

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: RNA

text: liver

text: DS-CA

text: hepatocellular carcinoma

text: No

text: Homo sapiens

characteristic: organism

text: female

text: Case Set

text: Carcinoma, Hepatocellular

text: Genomics of Hepatocellular Carcinoma

text: Yes

text: Non-tumor RNA sample from liver of a human female participant in the dbGaP study Genomics of Hepatocellular Carcinoma

characteristic: title


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: RNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: liver

characteristic: body site

text: DS-CA

text: hepatocellular carcinoma

characteristic: histological type

text: No

characteristic: is tumor

text: Homo sapiens

text: male

characteristic: sex

text: Case Set

text: Carcinoma, Hepatocellular

text: Genomics of Hepatocellular Carcinoma

text: Yes

text: Non-tumor RNA sample from liver of a human male participant in the dbGaP study Genomics of Hepatocellular Carcinoma


characteristic: External Id

text: dbGaP

characteristic: INSDC last update

text: live

text: Generic

text: RNA

text: liver

text: DS-CA

text: hepatocellular carcinoma

text: Yes

text: Homo sapiens

text: female

text: Case Set

characteristic: study design

text: Carcinoma, Hepatocellular

characteristic: study disease

text: Genomics of Hepatocellular Carcinoma

characteristic: study name

text: Yes

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Carcinoma, Hepatocellular tumor RNA sample from liver of a human female participant in the dbGaP study Genomics of Hepatocellular Carcinoma


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: RNA

text: liver

text: DS-CA

text: hepatocellular carcinoma

text: Yes

text: Homo sapiens

characteristic: organism

text: male

text: Case Set

text: Carcinoma, Hepatocellular

text: Genomics of Hepatocellular Carcinoma

text: Yes

text: Carcinoma, Hepatocellular tumor RNA sample from liver of a human male participant in the dbGaP study Genomics of Hepatocellular Carcinoma

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC last update

text: live

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: brain

characteristic: body site

text: DS-CA

text: metastatic tumor

characteristic: histological type

text: Yes

characteristic: is tumor

text: Homo sapiens

text: Case Set

text: Carcinoma, Hepatocellular

text: Genomics of Hepatocellular Carcinoma

text: Yes

text: Carcinoma, Hepatocellular tumor DNA sample from brain of a human participant in the dbGaP study Genomics of Hepatocellular Carcinoma


text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

text: DNA

text: liver

text: DS-CA

text: Non-malignant

text: No

text: Homo sapiens

text: Case Set

characteristic: study design

text: Carcinoma, Hepatocellular

characteristic: study disease

text: Genomics of Hepatocellular Carcinoma

characteristic: study name

text: Yes

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Non-tumor DNA sample from liver of a human participant in the dbGaP study Genomics of Hepatocellular Carcinoma


text: dbGaP

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

text: liver

text: DS-CA

text: hepatocellular carcinoma

text: No

text: Homo sapiens

characteristic: organism

text: Case Set

text: Carcinoma, Hepatocellular

text: Genomics of Hepatocellular Carcinoma

text: Yes

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC last update

text: live

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: blood

characteristic: body site

text: DS-CA

text: normal

characteristic: histological type

text: No

characteristic: is tumor

text: Homo sapiens

text: Case Set

text: Carcinoma, Hepatocellular

text: Genomics of Hepatocellular Carcinoma

text: Yes

text: Non-tumor DNA sample from blood of a human participant in the dbGaP study Genomics of Hepatocellular Carcinoma


text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

text: RNA

text: brain

text: DS-CA

text: metastatic tumor

text: Yes

text: Homo sapiens

text: Case Set

characteristic: study design

text: Carcinoma, Hepatocellular

characteristic: study disease

text: Genomics of Hepatocellular Carcinoma

characteristic: study name

text: Yes

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Carcinoma, Hepatocellular tumor RNA sample from brain of a human participant in the dbGaP study Genomics of Hepatocellular Carcinoma


text: King Abdullah University of Science and Technology

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

text: MIGS/MIMS/MIMARKS.plant-associated

characteristic: NCBI submission package

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Desert

characteristic: env biome

text: Desert

characteristic: env feature

text: Plant root

text: Pakistan: Mithi

characteristic: geo loc name

text: Janochloa antidotale

characteristic: host

text: LB

text: 24.75 N 69.93 E

characteristic: lat lon

text: Niallia circulans

characteristic: organism

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Niallia circulans

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Keywords: GSC:MIxS;MIGS:6.0

text: Desert

text: Desert

text: Plant root

text: Pakistan: Mithi

text: Janochloa antidotale

text: TSA

text: 24.75 N 69.93 E

text: Niallia circulans


characteristic: INSDC first public

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.plant-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: Desert

text: Desert

text: Plant root

text: Pakistan: Mithi

text: Janochloa antidotale

text: LB

text: 24.75 N 69.93 E

text: Bacillus halotolerans

text: MIGS Cultured Bacterial/Archaeal sample from Bacillus halotolerans


text: live

characteristic: INSDC status

text: Keywords: GSC:MIxS;MIGS:6.0

text: Desert

text: Desert

text: Plant root

text: Pakistan: Mithi

text: Janochloa antidotale

text: R2A+1.5% NaCl

text: 24.75 N 69.93 E

text: Niallia circulans


text: live

text: MIGS.ba

characteristic: NCBI submission model

text: MIGS/MIMS/MIMARKS.plant-associated

text: Keywords: GSC:MIxS;MIGS:6.0

text: Desert

text: Desert

text: Plant root

text: Pakistan: Mithi

text: Janochloa antidotale

text: LB

text: 24.75 N 69.93 E

text: Bacillus subtilis

text: MIGS Cultured Bacterial/Archaeal sample from Bacillus subtilis


text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.plant-associated

characteristic: NCBI submission package

text: Keywords: GSC:MIxS;MIGS:6.0

text: Desert

text: Desert

text: Plant root

text: Pakistan: Mithi

text: Janochloa antidotale

text: TSA

text: 24.75 N 69.93 E

text: Paenibacillus sp. PK3_47

text: MIGS Cultured Bacterial/Archaeal sample from Paenibacillus sp. PK3_47


DSM 15344

text: Zhejiang Academy of Agricultural Sciences

text: live

text: Microbe, viral or environmental

characteristic: collection date

characteristic: culture collection

text: Germany

text: activated sludge

characteristic: isolation source

text: Caldimonas thermodepolymerans

text: cell culture

characteristic: sample type

text: DSM 15344

text: Microbe sample from Schlegelella thermodepolymerans

text: type strain of Schlegelella thermodepolymerans

characteristic: type material


Tccam

text: National Taiwan University

characteristic: INSDC secondary accession

text: live

text: Plant

characteristic: SRA accession

text: 30 years old

characteristic: age

text: not collected

characteristic: cultivar

text: not collected

text: not collected

characteristic: ecotype

text: Taiwan: Nantou

text: not collected

characteristic: isolate

text: Taiwania cryptomerioides

text: wood cambium

characteristic: tissue

text: Plant sample from Taiwania cryptomerioides


Tcsw

characteristic: External Id

text: National Taiwan University

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Plant

text: 30 years old

text: not collected

text: not collected

text: not collected

text: Taiwan: Nantou

text: not collected

text: Taiwania cryptomerioides

characteristic: organism

text: sapwood

characteristic: title


Tctz

text: National Taiwan University

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Plant

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 30 years old

text: not collected

text: not collected

text: not collected

text: Taiwan: Nantou

text: not collected

text: Taiwania cryptomerioides

text: wood transition zone


Tchw

text: National Taiwan University

text: live

text: Plant

text: 30 years old

text: not collected

text: not collected

text: not collected

text: Taiwan: Nantou

text: not collected

text: Taiwania cryptomerioides

text: heartwood


BCRC 80649

text: live

text: Microbe, viral or environmental

characteristic: collection date

characteristic: culture collection

text: China:Yunnan province, Hehua hot spring in Tengchong

characteristic: geo loc name

text: hot spring

characteristic: isolation source

text: Caldimonas caldifontis

text: cell culture

characteristic: sample type

text: BCRC 80649

characteristic: strain

text: Microbe sample from Zhizhongheella caldifontis

text: type strain of Zhizhongheella caldifontis

characteristic: type material


text: Massachusetts Institute of Technology

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

characteristic: Tax ID

text: Well ID: GW-456, Sequencing ID: D17-102196

characteristic: description

text: USA: Tennessee, Oak Ridge Field Research Center

text: groundwater

text: Pseudomonas sp. GW456-12-1-14-TSB6

text: Draft genome assembly

characteristic: sequencing id

characteristic: well


characteristic: External Id

text: Massachusetts Institute of Technology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Well ID: FW-305, Sequencing ID: D17-102246

text: groundwater

text: Pseudomonas sp. FW305-3-2-15-E-TSA2

characteristic: organism

text: Draft genome assembly

characteristic: title


text: Massachusetts Institute of Technology

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: Well ID: FW-305, Sequencing ID: D17-102247

characteristic: geo loc name

text: groundwater

text: Pseudomonas sp. FW305-3-2-15-E-TSA4

text: Draft genome assembly


text: University of Freiburg

text: live

text: Generic

characteristic: NCBI submission package

text: dome stage (4.3 hpf)

characteristic: developmental stage

text: Nanog -/-

characteristic: genotype/variation

text: Danio rerio

text: embryos

text: embryos

characteristic: tissue

text: MZnanog mutant_dome stage_Mnase-seq


text: University of Freiburg

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: dome stage (4.3 hpf)

text: Pou5f3 -/-

text: Danio rerio

text: embryos

text: embryos

text: MZspg mutant_dome stage_Mnase-seq


text: University of Freiburg

text: live

text: Generic

text: dome stage (4.3 hpf)

text: wild type

text: Danio rerio

text: embryos

text: embryos

text: WT_dome stage_Mnase-seq


text: University of Freiburg

text: live

text: Generic

text: 512-cell stage (2.75 hpf)

text: Nanog -/-

text: Danio rerio

text: embryos

text: embryos

text: MZnanog mutant_512-cell stage_Mnase-seq


text: University of Freiburg

text: live

text: Generic

text: 512-cell stage (2.75 hpf)

text: Pou5f3 -/-

text: Danio rerio

text: embryos

text: embryos

text: MZspg mutant_512-cell stage_Mnase-seq


text: University of Freiburg

text: live

text: Generic

text: 512-cell stage (2.75 hpf)

text: wild type

text: Danio rerio

text: embryos

text: embryos

text: WT_512-cell stage_Mnase-seq


Intestinal microorganism

text: Hunan Agricultural Unniversity

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: China:Changsha

text: Pardosa pseudoannulata

characteristic: host

text: Pseudomonadota

text: Microbe sample from Pseudomonadota


Litoricola sp. HY2016

characteristic: External Id

text: Xiamen University

text: live

text: Microbe, viral or environmental

text: Kai Tang

characteristic: biomaterial provider

text: Yu Han

characteristic: collected by

text: surface seawater

characteristic: depth

text: marine algal bloom

characteristic: env biome

text: China: coastal ocean in Xiamen, Fujian

text: Coastal bloom seawater

characteristic: isolate

text: Institute of Marine Microbes and Ecospheres, and State Key Laboratory of Marine Environmental Science

characteristic: lab host

text: 24.59 N 118.16 E

characteristic: lat lon

text: Litorivicinus sp. HY2016

text: 2 mL

text: cell culture

characteristic: sample type

characteristic: strain

characteristic: temp

text: Microbe sample from Litoricola


text: Orthopaedics, Washington University in St Louis

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Day 21

characteristic: day

text: Donor 3

characteristic: donor

text: Homo sapiens

characteristic: organism

text: pooled from 3 pellets

characteristic: source

text: MSC derived pellets day 21

text: Donor 3 Day 21

characteristic: title


characteristic: External Id

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: Day 21

text: Donor 2

text: Homo sapiens

text: pooled from 3 pellets

text: MSC derived pellets day 21

text: Donor 2 Day 21


text: live

text: Generic

text: Day 21

text: Donor 1

text: Homo sapiens

text: pooled from 3 pellets

text: MSC derived pellets day 21

text: Donor 1 Day 21


text: live

text: Generic

text: MSCs harvested after trypsin digestion

characteristic: cell type

text: Day 0

text: Donor 3

text: Homo sapiens

text: Mesenchymal stem cells

text: Donor 3 Day 0


text: live

text: Generic

text: MSCs harvested after trypsin digestion

text: Day 0

text: Donor 2

text: Homo sapiens

text: Mesenchymal stem cells

text: Donor 2 Day 0


text: live

text: Generic

text: MSCs harvested after trypsin digestion

text: Day 0

text: Donor 1

text: Homo sapiens

text: Mesenchymal stem cells

text: Donor 1 Day 0


text: Baylor Research Institute

text: live

text: Generic

characteristic: cell line

text: Homo sapiens

text: GSE


text: Baylor Research Institute

text: live

text: Generic

characteristic: NCBI submission package

text: Homo sapiens

text: OPC


text: Baylor Research Institute

text: live

text: Generic

text: Homo sapiens

text: OPC


text: Baylor Research Institute

text: live

text: Generic

text: Homo sapiens

text: Control


text: Baylor Research Institute

text: live

text: Generic

text: RKO

text: Homo sapiens

text: GSE


text: Baylor Research Institute

text: live

text: Generic

text: RKO

text: Homo sapiens

text: OPC


text: Baylor Research Institute

text: live

text: Generic

text: RKO

text: Homo sapiens

text: OPC


text: Baylor Research Institute

text: live

text: Generic

text: RKO

text: Homo sapiens

text: Control


text: live

text: Microbe, viral or environmental

characteristic: collection date

text: China:Changsha

characteristic: geo loc name

text: Pardosa pseudoannulata

characteristic: host

text: Pseudomonadota

text: cadmium stress treatment


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: China:Changsha

text: Pardosa pseudoannulata

text: Pseudomonadota

text: normal feeding


text: Baylor Research Institute

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: healthy control

characteristic: diagnosis

text: Homo sapiens

characteristic: project

text: T-cells

text: I

characteristic: subject id

text: T-cells

characteristic: tissue

characteristic: treatment


characteristic: External Id

text: Baylor Research Institute

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: Systemic Lupus Erythematosus (SLE)

text: Homo sapiens

characteristic: organism

text: whole blood

text: whole blood

characteristic: title


text: Baylor Research Institute

text: live

text: Generic

text: Ox mtDNA generation and pDC activation: Ox mtDNA was generated as previously described. Briefly, healthy neutrophils were pre-incubated with IFNα2β (2000 U/ml; Schering Corp.) for 90 min at 370C and then extensively washed before incubation with anti-RNP IgG (50 μg/ml) purified from SLE patient sera. Neutrophil supernatants were then collected, centrifuged for 10 min at 1400g and stored at -80C. PDCs (5x105 cells/well - 96 U bottom plate) were cultured with 40% v/v Ox mtDNA-containing neutrophil supernatants (referred in the text as “Ox mtDNA”) or with 5 μg/ml of either CpGA (ODN-2216; Invivogen) for 24 h. The volume of Ox mtDNA-containing neutrophil supernatants and the concentration of CpGA were selected based on their capacity to trigger similar levels of IFNα production by pDCs.

characteristic: activation

text: healthy control

text: Homo sapiens

text: T-cells

text: III

text: T-cells

text: Ox mtDNA


text: Baylor Research Institute

text: live

text: Generic

text: healthy control

text: Homo sapiens

text: T-cells

text: II

text: T-cells

text: Ox mtDNA


text: Baylor Research Institute

text: live

text: Generic

text: healthy control

text: Homo sapiens

text: T-cells

text: I

text: T-cells

text: Ox mtDNA


text: Baylor Research Institute

text: live

text: Generic

text: healthy control

text: Homo sapiens

text: T-cells

text: III

text: T-cells

text: CpGA


text: Baylor Research Institute

text: live

text: Generic

text: healthy control

text: Homo sapiens

text: T-cells

text: II

text: T-cells

text: CpGA


text: Baylor Research Institute

text: live

text: Generic

text: healthy control

text: Homo sapiens

text: T-cells

text: I

text: T-cells

text: CpGA


text: Baylor Research Institute

text: live

text: Generic

text: healthy control

text: Homo sapiens

text: T-cells

text: III

text: T-cells


text: Baylor Research Institute

text: live

text: Generic

text: healthy control

text: Homo sapiens

text: T-cells

text: II

text: T-cells


text: Gene-Wei Li, MIT

text: live

text: Generic

text: MOPS complete (Teknova) with full supplement (Neidhart et al., 1974), with added 3% NaCl

characteristic: growth medium

text: Bacteria

text: NBRC 15636

characteristic: strain

text: Vibrio_natriegens_Rend_seq_MOPS_comp_3NaCl_25s_frag

text: type strain of Beneckea natriegens

characteristic: type-material


C. glabrata 2 h +thiamine

text: Villanova University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: 2 h

characteristic: age

text: Dennis Wykoff, 800 Lancaster Ave., Villanova PA 19085

characteristic: biomaterial provider

characteristic: collection date

text: RNA-seq data from 2 h with thiamine

characteristic: description

text: USA

characteristic: geo loc name

text: Nakaseomyces glabratus CBS 138

text: cell culture

characteristic: sample type

text: Microbe sample from Candida glabrata CBS 138


thiamine treatment1

characteristic: External Id

text: Villanova University

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: SRA accession

text: USA

text: Nakaseomyces glabratus CBS 138

text: cell culture

text: Microbe sample from Nakaseomyces glabratus CBS 138

text: RNA-seq data 2h thiamine replete (wild-type)

characteristic: treatment


thiamine treatment2

text: Villanova University

text: live

text: Microbe, viral or environmental

text: USA

text: Nakaseomyces glabratus CBS 138

characteristic: organism

text: cell culture

characteristic: strain

characteristic: title

text: RNA-seq data 2h thiamine starved (wild-type)


thiamine treatment3

text: Villanova University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: USA

text: Nakaseomyces glabratus CBS 138

text: cell culture

text: RNA-seq data 4 h thiamine replete (wild-type)


thiamine treatment4

text: Villanova University

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: RNA-seq data 4 h thiamine starved

text: USA

text: Nakaseomyces glabratus CBS 138

text: cell culture

text: RNA-seq data 4 h thiamine starved (wild-type)


thiamine treatment5

text: Villanova University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: RNA-seq data on thi3 delete 4 h thiamine replete

text: USA

text: Nakaseomyces glabratus CBS 138

text: cell culture


thiamine treatment6

text: Villanova University

text: live

text: Microbe, viral or environmental

text: USA

text: Nakaseomyces glabratus CBS 138

text: cell culture

text: RNA-seq data on thi3 delete 4 h thiamine starved


text: Department of Data Science, Dana-Farber Cancer Institute

text: live

text: Generic

characteristic: cell line

text: clear cell renal cell carcinoma (ccRCC) cell line

characteristic: cell type

text: none (input)

characteristic: chip antibody

text: Homo sapiens


characteristic: External Id

text: live

text: Generic

text: none (input)

text: Homo sapiens


characteristic: INSDC secondary accession

text: live

text: Generic

text: ZHX2 (Genetex, 112232)

text: Homo sapiens


text: live

characteristic: INSDC status

text: Generic

text: p65 (Santa Cruz Biotechnology, sc-372-x)

text: Homo sapiens


S. pararoseus NGR

text: Shenyang Agricultural University

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: Thirty meters

characteristic: altitude

characteristic: biomaterial provider

text: CGMCC and Dr. Bingxue Li, from College of Land and Environment, Shenyang Agricultural University

characteristic: collected by

text: Negative thirty meters

characteristic: depth

text: China

characteristic: geo loc name

text: strawberries

characteristic: isolate

text: Sporobolomyces pararoseus

text: cell culture

characteristic: sample type

text: NGR

text: Microbe sample from Sporidiobolus pararoseus


Chlamydiae Amazon FNV 2010 10 1 1 2

text: University of Massachusetts Amherst

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIGS.ba

text: 10 cm

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: 157 m

characteristic: elev

text: terrestrial

characteristic: env biome

text: soil

characteristic: env feature

text: soil

text: TRUE

characteristic: environmental sample

text: Brazil

text: Amazon FNV 2010 10 1 1 2

text: soil

characteristic: isolation source

text: 10.171667 S 62.7875 W

characteristic: lat lon

text: soil metagenome

characteristic: metagenome source

text: TRUE

characteristic: metagenomic

text: This BioSample is a metagenomic assembly obtained from the soil metagenome BioSample: SAMN08395412

characteristic: note

text: Chlamydiota bacterium

characteristic: organism

text: metagenomic assembly

text: MIGS Cultured Bacterial/Archaeal sample from Chlamydiota bacterium

characteristic: title


Verrucomicrobia Amazon FNV 2010 0 4

characteristic: External Id

text: University of Massachusetts Amherst

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: 10 cm

characteristic: depth

text: Keywords: GSC:MIxS;MIGS:6.0

text: 157 m

text: terrestrial

text: soil

text: soil

text: TRUE

text: Brazil

characteristic: geo loc name

text: Amazon FNV 2010 0 4

characteristic: isolate

text: soil

text: 10.171667 S 62.7875 W

text: soil metagenome

text: TRUE

text: Verrucomicrobiota bacterium

text: metagenomic assembly

text: MIGS Cultured Bacterial/Archaeal sample from Verrucomicrobiota bacterium


Verrucomicrobia Amazon FNV 2010 18 3 2

text: University of Massachusetts Amherst

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIGS.ba

text: 10 cm

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: 157 m

characteristic: elev

text: terrestrial

characteristic: env biome

text: soil

characteristic: env feature

text: soil

text: TRUE

text: Brazil

text: Amazon FNV 2010 18 3 2

text: soil

text: 10.171667 S 62.7875 W

text: soil metagenome

text: TRUE

text: Verrucomicrobiota bacterium

text: metagenomic assembly

characteristic: sample type


Verrucomicrobia Amazon FNV 2010 10 6 1

text: University of Massachusetts Amherst

text: live

text: MIGS.ba

text: 10 cm

text: Keywords: GSC:MIxS;MIGS:6.0

text: 157 m

text: terrestrial

text: soil

text: soil

text: TRUE

characteristic: environmental sample

text: Brazil

text: Amazon FNV 2010 10 6 1

text: soil

characteristic: isolation source

text: 10.171667 S 62.7875 W

characteristic: lat lon

text: soil metagenome

characteristic: metagenome source

text: TRUE

characteristic: metagenomic

characteristic: note

text: Verrucomicrobiota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: title


Bacteroidetes Amazon FNV 2010 21 8

characteristic: External Id

text: University of Massachusetts Amherst

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: 10 cm

characteristic: depth

text: Keywords: GSC:MIxS;MIGS:6.0

text: 157 m

text: terrestrial

text: soil

text: soil

text: TRUE

text: Brazil

characteristic: geo loc name

text: Amazon FNV 2010 21 8

characteristic: isolate

text: soil

text: 10.171667 S 62.7875 W

text: soil metagenome

text: TRUE

text: Bacteroidota bacterium

text: metagenomic assembly

text: MIGS Cultured Bacterial/Archaeal sample from Bacteroidota bacterium


Acidobacteria Amazon FNV 2010 25 4

text: University of Massachusetts Amherst

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIGS.ba

text: 10 cm

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: 157 m

characteristic: elev

text: terrestrial

characteristic: env biome

text: soil

characteristic: env feature

text: soil

text: TRUE

text: Brazil

text: Amazon FNV 2010 25 4

text: soil

text: 10.171667 S 62.7875 W

text: soil metagenome

text: TRUE

text: Acidobacteriota bacterium

text: metagenomic assembly

characteristic: sample type

text: MIGS Cultured Bacterial/Archaeal sample from Acidobacteriota bacterium


Proteobacteria Amazon FNV 2010 19 4

text: University of Massachusetts Amherst

text: live

text: MIGS.ba

text: 10 cm

text: Keywords: GSC:MIxS;MIGS:6.0

text: 157 m

text: terrestrial

text: soil

text: soil

text: TRUE

characteristic: environmental sample

text: Brazil

text: Amazon FNV 2010 19 4

text: soil

characteristic: isolation source

text: 10.171667 S 62.7875 W

characteristic: lat lon

text: soil metagenome

characteristic: metagenome source

text: TRUE

characteristic: metagenomic

characteristic: note

text: Pseudomonadota bacterium

characteristic: organism

text: metagenomic assembly

text: MIGS Cultured Bacterial/Archaeal sample from Pseudomonadota bacterium

characteristic: title


Acidobacteria Amazon FNV 2010 23 8

characteristic: External Id

text: University of Massachusetts Amherst

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: 10 cm

characteristic: depth

text: Keywords: GSC:MIxS;MIGS:6.0

text: 157 m

text: terrestrial

text: soil

text: soil

text: TRUE

text: Brazil

characteristic: geo loc name

text: Amazon FNV 2010 23 8

characteristic: isolate

text: soil

text: 10.171667 S 62.7875 W

text: soil metagenome

text: TRUE

text: Acidobacteriota bacterium

text: metagenomic assembly


Acidobacteria Amazon FNV 2010 17 8

text: University of Massachusetts Amherst

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIGS.ba

text: 10 cm

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: 157 m

characteristic: elev

text: terrestrial

characteristic: env biome

text: soil

characteristic: env feature

text: soil

text: TRUE

text: Brazil

text: Amazon FNV 2010 17 8

text: soil

text: 10.171667 S 62.7875 W

text: soil metagenome

text: TRUE

text: Acidobacteriota bacterium

text: metagenomic assembly

characteristic: sample type


Bacteroidetes Amazon FNV 2010 13 3

text: University of Massachusetts Amherst

text: live

text: MIGS.ba

text: 10 cm

text: Keywords: GSC:MIxS;MIGS:6.0

text: 157 m

text: terrestrial

text: soil

text: soil

text: TRUE

characteristic: environmental sample

text: Brazil

text: Amazon FNV 2010 13 3

text: soil

characteristic: isolation source

text: 10.171667 S 62.7875 W

characteristic: lat lon

text: soil metagenome

characteristic: metagenome source

text: TRUE

characteristic: metagenomic

characteristic: note

text: Bacteroidota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: title


Chloroflexi Amazon FNV 2010 25 1

characteristic: External Id

text: University of Massachusetts Amherst

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: 10 cm

characteristic: depth

text: Keywords: GSC:MIxS;MIGS:6.0

text: 157 m

text: terrestrial

text: soil

text: soil

text: TRUE

text: Brazil

characteristic: geo loc name

text: Amazon FNV 2010 25 1

characteristic: isolate

text: soil

text: 10.171667 S 62.7875 W

text: soil metagenome

text: TRUE

text: Chloroflexota bacterium

text: metagenomic assembly

text: MIGS Cultured Bacterial/Archaeal sample from Chloroflexota bacterium


Proteobacteria Amazon FNV 2010 31 3

text: University of Massachusetts Amherst

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIGS.ba

text: 10 cm

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: 157 m

characteristic: elev

text: terrestrial

characteristic: env biome

text: soil

characteristic: env feature

text: soil

text: TRUE

text: Brazil

text: Amazon FNV 2010 31 3

text: soil

text: 10.171667 S 62.7875 W

text: soil metagenome

text: TRUE

text: Pseudomonadota bacterium

text: metagenomic assembly

characteristic: sample type


text: Ningxia univertisty

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: Fei ma

characteristic: biomaterial provider

text: Fei ma

characteristic: collected by

text: Bacterial rhizosphere community isolated form Caragana species

text: arid and semiarid region

text: China:yinchuan

text: Caragana korshinskii Kom

characteristic: host

text: root

text: Fei ma

characteristic: identified by

text: rhizosphere

text: root

characteristic: isolation source

text: Pseudomonadota bacterium

characteristic: organism

text: whole organism

text: Proteobacteria

characteristic: strain

characteristic: temp

text: Microbe sample from Proteobacteria bacterium

characteristic: title


characteristic: External Id

text: IMEDEA

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Spain: Canary Islands

characteristic: geo loc name

text: Squid

text: Mycoplasma todarodis

text: cell culture

text: Microbe sample from Mycoplasma todarodis

text: type strain of Mycoplasma todarodis

characteristic: type-material


text: Massachusetts Institute of Technology

text: live

text: Microbe, viral or environmental

text: TRUE

characteristic: environmental sample

text: USA: South Dakota, Sanford Underground Research Facility

text: North America_1

characteristic: isolate

text: deeply circulating subsurface aquifer fluids

text: 44.352157 N 103.750503 W

characteristic: lat lon

text: subsurface metagenome

characteristic: metagenome source

text: TRUE

characteristic: metagenomic

text: This BioSample is a metagenomic assembly obtained from the subsurface metagenome BioSample: SAMN06064270

characteristic: note

text: Chloroflexota bacterium

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Chloroflexota bacterium


characteristic: External Id

text: Massachusetts Institute of Technology

text: live

text: Microbe, viral or environmental

text: TRUE

text: North America_2

characteristic: isolation source

text: 44.352157 N 103.750503 W

text: subsurface metagenome

text: TRUE

text: Chloroflexota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: title


text: Massachusetts Institute of Technology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: TRUE

text: North America_3

text: 44.352157 N 103.750503 W

text: subsurface metagenome

text: TRUE

text: This BioSample is a metagenomic assembly obtained from the subsurface metagenome BioSample: SAMN06064269

text: Chloroflexota bacterium

text: metagenomic assembly


text: Massachusetts Institute of Technology

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: TRUE

characteristic: geo loc name

text: North America_4

text: 44.352157 N 103.750503 W

text: subsurface metagenome

text: TRUE

text: Chloroflexota bacterium

text: metagenomic assembly


text: Massachusetts Institute of Technology

text: live

text: Microbe, viral or environmental

text: TRUE

characteristic: environmental sample

text: North America_5

characteristic: isolate

text: 44.352157 N 103.750503 W

characteristic: lat lon

text: subsurface metagenome

text: TRUE

text: Chloroflexota bacterium

text: metagenomic assembly


text: Massachusetts Institute of Technology

text: live

text: Microbe, viral or environmental

text: TRUE

text: North America_6

text: 44.352157 N 103.750503 W

text: subsurface metagenome

characteristic: metagenome source

text: TRUE

characteristic: metagenomic

characteristic: note

text: Chloroflexota bacterium

text: metagenomic assembly


characteristic: External Id

text: Massachusetts Institute of Technology

text: live

text: Microbe, viral or environmental

text: TRUE

text: North America_7

characteristic: isolation source

text: 44.352157 N 103.750503 W

text: subsurface metagenome

text: TRUE

text: Chloroflexota bacterium

text: metagenomic assembly

characteristic: sample type


text: Massachusetts Institute of Technology

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: TRUE

text: South Africa: Beatrix Gold Mine

text: South Africa_8

text: 28.79583 S 26.77917 E

text: subsurface metagenome

text: TRUE

text: This BioSample is a metagenomic assembly obtained from the subsurface metagenome BioSample: xxxx

text: Chloroflexota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: title


text: Massachusetts Institute of Technology

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: TRUE

text: South Africa: Beatrix Gold Mine

text: South Africa_9

text: 28.79583 S 26.77917 E

text: subsurface metagenome

text: TRUE

text: Chloroflexota bacterium

text: metagenomic assembly


text: Massachusetts Institute of Technology

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: TRUE

text: South Africa: Beatrix Gold Mine

text: South Africa_10

text: 28.79583 S 26.77917 E

text: subsurface metagenome

text: TRUE

text: Chloroflexota bacterium

text: metagenomic assembly


text: Massachusetts Institute of Technology

text: live

text: Microbe, viral or environmental

text: TRUE

characteristic: environmental sample

text: South Africa: Beatrix Gold Mine

characteristic: geo loc name

text: South Africa_11

characteristic: isolate

text: 28.79583 S 26.77917 E

text: subsurface metagenome

text: TRUE

text: Chloroflexota bacterium

text: metagenomic assembly


text: Massachusetts Institute of Technology

text: live

text: Microbe, viral or environmental

text: TRUE

text: South Africa: Tau Tona Gold Mine

text: South Africa_12

text: 26.418056 S 27.427222 E

characteristic: lat lon

text: subsurface metagenome

characteristic: metagenome source

text: TRUE

characteristic: metagenomic

text: Chloroflexota bacterium

text: metagenomic assembly


characteristic: External Id

text: Massachusetts Institute of Technology

text: live

text: Microbe, viral or environmental

text: TRUE

text: South Africa: Tau Tona Gold Mine

text: South Africa_13

characteristic: isolation source

text: 26.418056 S 27.427222 E

text: subsurface metagenome

text: TRUE

characteristic: note

text: Chloroflexota bacterium

text: metagenomic assembly


text: Massachusetts Institute of Technology

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: TRUE

text: South Africa: Tau Tona Gold Mine

text: South Africa_14

text: 26.418056 S 27.427222 E

text: subsurface metagenome

text: TRUE

text: Chloroflexota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type


text: Massachusetts Institute of Technology

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: TRUE

text: South Africa: Finsch Diamond Mine

text: South Africa_15

text: 28.3783 S 23.4458 E

text: subsurface metagenome

text: TRUE

text: Chloroflexota bacterium

text: metagenomic assembly

characteristic: title


text: Massachusetts Institute of Technology

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: TRUE

text: South Africa: Beatrix Gold Mine

text: South Africa_16

text: 28.79583 S 26.77917 E

text: subsurface metagenome

text: TRUE

text: Chloroflexota bacterium

text: metagenomic assembly


text: Massachusetts Institute of Technology

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: TRUE

characteristic: environmental sample

text: South Africa: Finsch Diamond Mine

characteristic: geo loc name

text: South Africa_17

text: 28.3783 S 23.4458 E

text: subsurface metagenome

text: TRUE

text: Chloroflexota bacterium

text: metagenomic assembly


text: Massachusetts Institute of Technology

text: live

text: Microbe, viral or environmental

text: TRUE

text: South Africa: Masimong Gold Mine

text: South Africa_18

characteristic: isolate

text: 27.981 S 26.875 E

characteristic: lat lon

text: subsurface metagenome

characteristic: metagenome source

text: TRUE

text: Chloroflexota bacterium

text: metagenomic assembly


characteristic: External Id

text: Massachusetts Institute of Technology

text: live

text: Microbe, viral or environmental

text: TRUE

text: South Africa: Beatrix Gold Mine

text: South Africa_19

characteristic: isolation source

text: 28.79583 S 26.77917 E

text: subsurface metagenome

text: TRUE

characteristic: metagenomic

text: Chloroflexota bacterium

text: metagenomic assembly


text: Massachusetts Institute of Technology

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: TRUE

text: South Africa: Masimong Gold Mine

text: South Africa_20

text: 27.981 S 26.875 E

text: subsurface metagenome

text: TRUE

characteristic: note

text: Chloroflexota bacterium

characteristic: organism

text: metagenomic assembly


name: Chloroflexi bacterium ERB_10_1 MAG from fumarolic sediment microbial communities on Mt. Erebus, Antarctica

text: International Centre for Terrestrial Antarctic Research, University of Waikato, New Zealand

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: 3370 m

characteristic: altitude

text: 0-4 cm

characteristic: depth

text: terrestrial geothermal fumarole

characteristic: env biome

text: Antarctica: Tramway Ridge, Mt. Erebus

text: Geothermal fumarole subsurface microbial communities from Mt. Erebus, Antarctica

text: 77.52 S 167.11 E

text: subsurface metagenome

text: This BioSample is a metagenomic assembly obtained from the fumarole metagenome BioSamples: SAMEA2163752 and SAMEA2163753

text: Chloroflexota bacterium

text: metagenomic assembly

characteristic: sample type

characteristic: temp


name: Chloroflexi bacterium ERB_11_1 MAG from fumarolic sediment microbial communities on Mt. Erebus, Antarctica

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 3370 m

characteristic: collection date

text: 0-4 cm

text: terrestrial geothermal fumarole

characteristic: environmental sample

text: Antarctica: Tramway Ridge, Mt. Erebus

characteristic: geo loc name

text: 77.52 S 167.11 E

text: subsurface metagenome

text: Chloroflexota bacterium

text: metagenomic assembly

characteristic: title


name: Chloroflexi bacterium ERB_19_3 MAG from fumarolic sediment microbial communities on Mt. Erebus, Antarctica

characteristic: External Id

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: 3370 m

text: 0-2 cm

text: terrestrial geothermal fumarole

text: Antarctica: Tramway Ridge, Mt. Erebus

characteristic: isolate

characteristic: isolation source

text: 77.52 S 167.11 E

characteristic: lat lon

text: subsurface metagenome

characteristic: metagenome source

characteristic: metagenomic

text: This BioSample is a metagenomic assembly obtained from the fumarole metagenome BioSample: SAMEA2163752

text: Chloroflexota bacterium

text: metagenomic assembly


name: Chloroflexi bacterium ERB_20_1 MAG from fumarolic sediment microbial communities on Mt. Erebus, Antarctica

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: 3370 m

characteristic: altitude

text: 0-2 cm

characteristic: depth

text: terrestrial geothermal fumarole

characteristic: env biome

text: Antarctica: Tramway Ridge, Mt. Erebus

text: 77.52 S 167.11 E

text: subsurface metagenome

characteristic: note

text: Chloroflexota bacterium

characteristic: organism

text: metagenomic assembly


name: Chloroflexi bacterium ERB_20_2 MAG from fumarolic sediment microbial communities on Mt. Erebus, Antarctica

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 3370 m

characteristic: collection date

text: 0-2 cm

text: terrestrial geothermal fumarole

characteristic: environmental sample

text: Antarctica: Tramway Ridge, Mt. Erebus

text: 77.52 S 167.11 E

text: subsurface metagenome

text: Chloroflexota bacterium

text: metagenomic assembly

characteristic: sample type

characteristic: temp


name: Chloroflexi bacterium ERB_20_3 MAG from fumarolic sediment microbial communities on Mt. Erebus, Antarctica

characteristic: External Id

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: 3370 m

text: 2-4 cm

text: terrestrial geothermal fumarole

text: Antarctica: Tramway Ridge, Mt. Erebus

characteristic: geo loc name

characteristic: isolate

characteristic: isolation source

text: 77.52 S 167.11 E

characteristic: lat lon

text: subsurface metagenome

text: This BioSample is a metagenomic assembly obtained from the fumarole metagenome BioSample: SAMEA2163753

text: Chloroflexota bacterium

text: metagenomic assembly

characteristic: title


name: Chloroflexi bacterium ERB_22_1 MAG from fumarolic sediment microbial communities on Mt. Erebus, Antarctica

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: 3370 m

characteristic: altitude

text: 0-2 cm

characteristic: depth

text: terrestrial geothermal fumarole

characteristic: env biome

text: Antarctica: Tramway Ridge, Mt. Erebus

text: 77.52 S 167.11 E

text: subsurface metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Chloroflexota bacterium

text: metagenomic assembly


name: Chloroflexi bacterium ERB_22_2 MAG from fumarolic sediment microbial communities on Mt. Erebus, Antarctica

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 3370 m

characteristic: collection date

text: 2-4 cm

text: terrestrial geothermal fumarole

characteristic: environmental sample

text: Antarctica: Tramway Ridge, Mt. Erebus

text: 77.52 S 167.11 E

text: subsurface metagenome

characteristic: note

text: Chloroflexota bacterium

characteristic: organism

text: metagenomic assembly


name: Armatimonadetes bacterium ERB_24_1 MAG from fumarolic sediment microbial communities on Mt. Erebus, Antarctica

characteristic: External Id

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: 3370 m

text: 0-2 cm

text: terrestrial geothermal fumarole

text: Antarctica: Tramway Ridge, Mt. Erebus

characteristic: geo loc name

characteristic: isolate

characteristic: isolation source

text: 77.52 S 167.11 E

text: subsurface metagenome

text: Armatimonadota bacterium

text: metagenomic assembly

characteristic: sample type

characteristic: temp

text: Microbe sample from Armatimonadota bacterium


name: Chloroflexi bacterium ERB_25_0 MAG from fumarolic sediment microbial communities on Mt. Erebus, Antarctica

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: 3370 m

characteristic: altitude

text: 0-4 cm

characteristic: depth

text: terrestrial geothermal fumarole

characteristic: env biome

text: Antarctica: Tramway Ridge, Mt. Erebus

text: 77.52 S 167.11 E

characteristic: lat lon

text: subsurface metagenome

text: Chloroflexota bacterium

text: metagenomic assembly

characteristic: title


name: Armatimonadetes bacterium ERB_33_1 MAG from fumarolic sediment microbial communities on Mt. Erebus, Antarctica

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 3370 m

characteristic: collection date

text: 0-2 cm

text: terrestrial geothermal fumarole

characteristic: environmental sample

text: Antarctica: Tramway Ridge, Mt. Erebus

text: 77.52 S 167.11 E

text: subsurface metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Armatimonadota bacterium

text: metagenomic assembly


name: Armatimonadetes bacterium ERB_34_1 MAG from fumarolic sediment microbial communities on Mt. Erebus, Antarctica

characteristic: External Id

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: 3370 m

text: 2-4 cm

text: terrestrial geothermal fumarole

text: Antarctica: Tramway Ridge, Mt. Erebus

characteristic: geo loc name

characteristic: isolate

characteristic: isolation source

text: 77.52 S 167.11 E

text: subsurface metagenome

characteristic: note

text: Armatimonadota bacterium

characteristic: organism

text: metagenomic assembly


name: Armatimonadetes bacterium ERB_34_2 MAG from fumarolic sediment microbial communities on Mt. Erebus, Antarctica

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: 3370 m

characteristic: altitude

text: 0-4 cm

characteristic: depth

text: terrestrial geothermal fumarole

characteristic: env biome

text: Antarctica: Tramway Ridge, Mt. Erebus

text: 77.52 S 167.11 E

text: subsurface metagenome

text: Armatimonadota bacterium

text: metagenomic assembly

characteristic: sample type

characteristic: temp


name: Thaumarchaeota archaeon ERB_5_1 MAG from fumarolic sediment microbial communities on Mt. Erebus, Antarctica

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 3370 m

characteristic: collection date

text: 2-4 cm

text: terrestrial geothermal fumarole

characteristic: environmental sample

text: Antarctica: Tramway Ridge, Mt. Erebus

text: 77.52 S 167.11 E

characteristic: lat lon

text: subsurface metagenome

text: Nitrososphaerota archaeon

text: metagenomic assembly

text: Microbe sample from Nitrososphaerota archaeon

characteristic: title


name: Armatimonadetes bacterium ERB_6_1 MAG from fumarolic sediment microbial communities on Mt. Erebus, Antarctica

characteristic: External Id

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: 3370 m

text: 0-2 cm

text: terrestrial geothermal fumarole

text: Antarctica: Tramway Ridge, Mt. Erebus

characteristic: geo loc name

characteristic: isolate

characteristic: isolation source

text: 77.52 S 167.11 E

text: subsurface metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Armatimonadota bacterium

text: metagenomic assembly


name: Armatimonadetes bacterium ERB_6_2 MAG from fumarolic sediment microbial communities on Mt. Erebus, Antarctica

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: 3370 m

characteristic: altitude

text: 0-4 cm

characteristic: depth

text: terrestrial geothermal fumarole

characteristic: env biome

text: Antarctica: Tramway Ridge, Mt. Erebus

text: 77.52 S 167.11 E

text: subsurface metagenome

characteristic: note

text: Armatimonadota bacterium

characteristic: organism

text: metagenomic assembly


name: Armatimonadetes bacterium ERB_6_3 MAG from fumarolic sediment microbial communities on Mt. Erebus, Antarctica

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 3370 m

characteristic: collection date

text: 0-2 cm

text: terrestrial geothermal fumarole

characteristic: environmental sample

text: Antarctica: Tramway Ridge, Mt. Erebus

text: 77.52 S 167.11 E

text: subsurface metagenome

text: Armatimonadota bacterium

text: metagenomic assembly

characteristic: sample type

characteristic: temp


name: Chloroflexi bacterium ERB_7_1 MAG from fumarolic sediment microbial communities on Mt. Erebus, Antarctica

characteristic: External Id

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: 3370 m

text: 0-4 cm

text: terrestrial geothermal fumarole

text: Antarctica: Tramway Ridge, Mt. Erebus

characteristic: geo loc name

characteristic: isolate

characteristic: isolation source

text: 77.52 S 167.11 E

characteristic: lat lon

text: subsurface metagenome

text: Chloroflexota bacterium

text: metagenomic assembly

characteristic: title