characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: HMB-PUB

text: Homo sapiens

text: male

text: Case Set

text: Prostatic Neoplasms

characteristic: study disease

text: Yes

characteristic: subject is affected

text: Sample from a human male participant in the dbGaP study The Genetic Basis of Aggressive Prostate Cancer, The Role of Rare Variation


status: PUBLIC

text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: DNA

tag: attribute

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Blood

characteristic: body site

text: DS-CA-PUB

text: No

characteristic: is tumor

text: Homo sapiens

characteristic: organism

text: male

characteristic: sex

text: Case Set

characteristic: study design

text: Prostatic Neoplasms

characteristic: study name

text: Yes

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Non-tumor DNA sample from Blood of a human male participant in the dbGaP study The Genetic Basis of Aggressive Prostate Cancer, The Role of Rare Variation

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

text: Blood

text: HMB-PUB

text: No

text: Homo sapiens

text: male

text: Case Set

text: Prostatic Neoplasms

characteristic: study disease

text: The Genetic Basis of Aggressive Prostate Cancer, The Role of Rare Variation

text: Yes


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Blood

characteristic: body site

text: DS-CA-PUB

text: No

characteristic: is tumor

text: Homo sapiens

text: male

text: Case Set

text: Prostatic Neoplasms

text: Yes

characteristic: subject is affected


text: Centre for genomic regulation

text: live

text: Pathogen.cl

text: Institut Pasteur

characteristic: collected by

characteristic: collection date

text: France

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: Myloblastic leukaemia

characteristic: host disease

text: Bronchiolo-alveolar lavage

characteristic: isolation source

text: 48.86 N 2.35 E

characteristic: lat lon

text: Nakaseomyces glabratus

characteristic: organism

characteristic: strain

characteristic: title


characteristic: External Id

text: Centre for genomic regulation

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Institut Pasteur

text: France

text: Homo sapiens

text: Myloblastic leukaemia

text: Peritoneal fluid

text: 48.86 N 2.35 E

text: Nakaseomyces glabratus


text: Centre for genomic regulation

text: live

text: Pathogen.cl

text: Institut Pasteur

characteristic: collected by

characteristic: collection date

text: France

characteristic: geo loc name

text: Homo sapiens

text: Myloblastic leukaemia

text: Blood culture

text: 48.86 N 2.35 E

text: Nakaseomyces glabratus


Actopan soil biocrust

text: UAM

text: live

text: Metagenome or environmental

text: Mexico:Hidalgo

text: soil biocrust

characteristic: isolation source

text: 20.26747222 N 98.91597222 W

text: biocrust metagenome

text: Metagenome or environmental sample from biocrust metagenome


Atexcac soil biocrust

text: UAM

text: live

text: Metagenome or environmental

text: Mexico:Puebla

text: soil biocrust

text: 19.33694444 N 97.35527777 W

characteristic: lat lon

text: biocrust metagenome


text: Baylor College of MEdicine

text: live

text: Generic

text: SRC-2/NCOA2 (Bethyl A300-346A)

characteristic: antibody

text: endometrial stromal cells

characteristic: cell type

text: Homo sapiens

characteristic: organism

text: human endometrial stromal cells (hESCs)

text: HESC_SRC-2/NCOA2 ChIP-seq

text: 10nM beta-estradiol, 100nM medroxyprogesterone acetate, and 1mM cAMP

characteristic: treatment


characteristic: External Id

text: Baylor College of MEdicine

characteristic: INSDC center name

text: live

text: Generic

text: endometrial stromal cells

text: Homo sapiens

text: human endometrial stromal cells (hESCs)

characteristic: title


text: Phillip Sharp, Koch Institute, MIT

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: ATTCCT

characteristic: barcode

characteristic: cell line

text: Embryonic Stem Cells

characteristic: clone number

text: -Dox 72 hours

characteristic: dox treatment

text: Cdk13-/-; Cdk13 Tg+

characteristic: genotype

text: Mus musculus

characteristic: rin value

characteristic: strain background


text: Phillip Sharp, Koch Institute, MIT

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: ACTGAT

text: Embryonic Stem Cells

text: -Dox 72 hours

text: Cdk13-/-; Cdk13 Tg+

text: Mus musculus


characteristic: External Id

text: Phillip Sharp, Koch Institute, MIT

text: live

text: Generic

text: GAGTGG

text: Embryonic Stem Cells

characteristic: cell type

text: -Dox 72 hours

text: Cdk13-/-; Cdk13 Tg+

text: Mus musculus

characteristic: organism


text: Phillip Sharp, Koch Institute, MIT

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: CGTACG

text: Embryonic Stem Cells

text: -Dox 72 hours

text: Cdk13-/-; Cdk13 Tg+

text: Mus musculus

characteristic: title


text: Phillip Sharp, Koch Institute, MIT

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: GTTTCG

characteristic: barcode

text: Embryonic Stem Cells

text: -Dox 48 hours

text: Cdk13-/-; Cdk13 Tg+

text: Mus musculus


text: Phillip Sharp, Koch Institute, MIT

text: live

text: Generic

text: GTGGCC

characteristic: cell line

text: Embryonic Stem Cells

characteristic: clone number

text: -Dox 48 hours

characteristic: dox treatment

text: Cdk13-/-; Cdk13 Tg+

text: Mus musculus


text: Phillip Sharp, Koch Institute, MIT

text: live

text: Generic

text: GGCTAC

text: Embryonic Stem Cells

text: -Dox 48 hours

text: Cdk13-/-; Cdk13 Tg+

characteristic: genotype

text: Mus musculus

characteristic: rin value

characteristic: strain background


text: Phillip Sharp, Koch Institute, MIT

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: TAGCTT

text: Embryonic Stem Cells

text: -Dox 48 hours

text: Cdk13-/-; Cdk13 Tg+

text: Mus musculus


characteristic: External Id

text: Phillip Sharp, Koch Institute, MIT

text: live

text: Generic

characteristic: SRA accession

text: GATCAG

text: Embryonic Stem Cells

characteristic: cell type

text: +Dox

text: Cdk13-/-; Cdk13 Tg+

text: Mus musculus


text: Phillip Sharp, Koch Institute, MIT

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: ACTTGA

text: Embryonic Stem Cells

text: +Dox

text: Cdk13-/-; Cdk13 Tg+

text: Mus musculus

characteristic: organism


text: Phillip Sharp, Koch Institute, MIT

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: TTAGGC

text: Embryonic Stem Cells

text: +Dox

text: Cdk13-/-; Cdk13 Tg+

text: Mus musculus

characteristic: title


text: Phillip Sharp, Koch Institute, MIT

text: live

text: Generic

text: ATCACG

characteristic: barcode

characteristic: cell line

text: Embryonic Stem Cells

characteristic: clone number

text: +Dox

text: Cdk13-/-; Cdk13 Tg+

text: Mus musculus


text: CINVESTAV - Langebio

text: live

text: Plant

text: var. guatemalensis

characteristic: cultivar

text: Young leaves

characteristic: dev stage

text: Mexico: Chiapas

characteristic: geo loc name

text: Persea nubigena var. guatemalensis

text: leaves

characteristic: tissue

text: Plant sample from Persea americana var. guatemalensis: CH-G-07

text: guatemalensis

characteristic: variety


characteristic: External Id

text: Beijing Normal University

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 6-12hr embryo

characteristic: age

text: not collected

characteristic: breed

text: Kc line established from 6-12 hr embryos of cross se x e. Clone 167 isolated in Goldschmitt-Clermont laboratory. Selected for growth in high-pH medium by Bourouis and Jarry. Restored to normal medium in Cherbas laboratory

text: kc167 cell lines

text: Drosophila melanogaster cells

text: not collected

text: embryo

text: not collected

characteristic: ecotype

text: Drosophila melanogaster

text: female

characteristic: sex

text: Transcriptome analysis suggests plasmatocyte-like properties for Kc167 cells (Cherbas et al., 2011)

text: Model organism or animal sample from Drosophila melanogaster

text: treated with 5μM Geldanamycin for 1hr

characteristic: treatment


text: Beijing Normal University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

characteristic: SRA accession

text: 6-12hr embryo

text: not collected

text: kc167 cell lines

text: Drosophila melanogaster cells

text: not collected

text: embryo

text: not collected

text: Drosophila melanogaster

characteristic: organism

text: female

text: Transcriptome analysis suggests plasmatocyte-like properties for Kc167 cells (Cherbas et al., 2012)

characteristic: title

text: treated with DMSO for 1hr


text: Beijing Normal University

text: live

text: Model organism or animal

text: 6-12hr embryo

text: not collected

text: kc167 cell lines

text: Drosophila melanogaster cells

text: not collected

characteristic: cultivar

text: embryo

text: not collected

text: Drosophila melanogaster

text: female

text: Transcriptome analysis suggests plasmatocyte-like properties for Kc167 cells (Cherbas et al., 2013)

characteristic: tissue

text: treated with 5μM Geldanamycin for 1hr


characteristic: External Id

text: Beijing Normal University

text: live

characteristic: INSDC status

text: Model organism or animal

text: 6-12hr embryo

text: not collected

text: kc167 cell lines

text: Drosophila melanogaster cells

text: not collected

text: embryo

text: not collected

text: Drosophila melanogaster

text: female

text: Transcriptome analysis suggests plasmatocyte-like properties for Kc167 cells (Cherbas et al., 2014)

text: treated with DMSO for 1hr


text: Beijing Normal University

text: live

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 6-12hr embryo

text: not collected

text: kc167 cell lines

text: Drosophila melanogaster cells

text: not collected

text: embryo

text: not collected

text: Drosophila melanogaster

text: female

text: treated with 5μM Geldanamycin for 4hr


text: Beijing Normal University

text: live

text: Model organism or animal

text: 6-12hr embryo

characteristic: age

text: not collected

characteristic: breed

text: kc167 cell lines

text: Drosophila melanogaster cells

text: not collected

text: embryo

text: not collected

text: Drosophila melanogaster

text: female

text: treated with DMSO for 4hr


text: Beijing Normal University

text: live

text: Model organism or animal

text: 6-12hr embryo

text: not collected

text: kc167 cell lines

text: Drosophila melanogaster cells

text: not collected

text: embryo

text: not collected

characteristic: ecotype

text: Drosophila melanogaster

text: female

characteristic: sex

text: treated with 5μM Geldanamycin for 4hr


text: Beijing Normal University

characteristic: INSDC center name

text: live

text: Model organism or animal

text: 6-12hr embryo

text: not collected

text: kc167 cell lines

text: Drosophila melanogaster cells

text: not collected

text: embryo

text: not collected

text: Drosophila melanogaster

text: female

text: treated with DMSO for 4hr

characteristic: treatment


text: Baylor College of MEdicine

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: genotype

text: Mus musculus

text: thymus

text: thymus


text: Baylor College of MEdicine

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: control

text: Mus musculus

characteristic: organism

text: thymus

text: thymus


text: Baylor College of MEdicine

text: live

text: Generic

text: experiment 3

characteristic: experiment number

text: Homo sapiens

text: EGR1 siRNA

characteristic: sirna

text: T HESCs (ATCC CRL-4003)

characteristic: title


characteristic: External Id

text: Baylor College of MEdicine

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: experiment 3

text: Homo sapiens

text: nontargeting siRNA

text: T HESCs (ATCC CRL-4003)


text: Baylor College of MEdicine

text: live

text: Generic

characteristic: NCBI submission package

text: experiment 2

text: Homo sapiens

text: EGR1 siRNA

text: T HESCs (ATCC CRL-4003)


text: Baylor College of MEdicine

text: live

text: Generic

text: experiment 2

text: Homo sapiens

text: nontargeting siRNA

text: T HESCs (ATCC CRL-4003)


text: Baylor College of MEdicine

text: live

text: Generic

text: experiment 1

text: Homo sapiens

text: EGR1 siRNA

text: T HESCs (ATCC CRL-4003)


text: Baylor College of MEdicine

text: live

text: Generic

text: experiment 1

text: Homo sapiens

text: nontargeting siRNA

text: T HESCs (ATCC CRL-4003)


Undibacterium sp. S11R28

text: KyungHee University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: South Korea

characteristic: geo loc name

text: Coreoleuciscus splendidus

characteristic: host

text: gut

characteristic: isolation source

text: Undibacterium piscinae

text: mono bacterial isolate

characteristic: sample type

characteristic: strain

text: Undibacterium sp. S11R28 isolated from the gut of a Korean shiner, Coreoleuciscus splendidus

text: type material of Undibacterium piscinae

characteristic: type-material


Microtus richardsoni

text: Iridian Genomes

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

text: adult

characteristic: dev stage

text: IRGN JQ59JK4JDI

characteristic: isolate

text: captive-bred

text: Microtus richardsoni

text: not determined

characteristic: sex

text: muscle

characteristic: tissue

text: Model organism or animal sample from Microtus richardsoni


Sorex palustris

characteristic: External Id

text: Iridian Genomes

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

characteristic: SRA accession

text: adult

text: IRGN LD8KKWJD8T

text: captive-bred

text: Sorex palustris

characteristic: organism

text: not determined

text: muscle

text: Model organism or animal sample from Sorex palustris

characteristic: title


Nycticebus pygmaeus

text: Manchester Metropolitan University

text: live

text: MIGS.eu

characteristic: NCBI submission package

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Xanthonycticebus pygmaeus

text: Shotgun genomic sequencing data


text: University of New Mexico

characteristic: INSDC center name

text: live

text: Model organism or animal

text: Australia: Western Australia

characteristic: geo loc name

text: Acanthagenys rufogularis

text: tissue

characteristic: sample type

characteristic: specimen voucher

text: muscle

text: Model organism or animal sample from Acanthagenys rufogularis


text: University of New Mexico

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

text: Australia: Western Australia

text: Anthochaera carunculata

text: tissue

text: muscle

text: Model organism or animal sample from Anthochaera carunculata


text: University of New Mexico

text: live

text: Model organism or animal

text: New Zealand

text: Anthornis melanura

text: tissue

text: muscle

characteristic: tissue

text: Model organism or animal sample from Anthornis melanura


characteristic: External Id

text: University of New Mexico

text: live

text: Model organism or animal

text: Australia: Queensland

text: Ashbyia lovensis

text: tissue

text: muscle

text: Model organism or animal sample from Ashbyia lovensis


text: University of New Mexico

text: live

characteristic: INSDC status

text: Model organism or animal

text: Australia: Queensland

text: Bolemoreus frenatus

text: tissue

text: muscle

text: Model organism or animal sample from Bolemoreus frenatus


text: University of New Mexico

text: live

text: Model organism or animal

characteristic: NCBI submission model

text: Australia: New South Wales

text: Caligavis chrysops

text: tissue

text: muscle

text: Model organism or animal sample from Caligavis chrysops


text: University of New Mexico

text: live

text: Model organism or animal

characteristic: SRA accession

text: Australia: Western Australia

text: Certhionyx variegatus

text: tissue

text: muscle

text: Model organism or animal sample from Certhionyx variegatus


text: University of New Mexico

text: live

text: Model organism or animal

text: Australia: Queensland

text: Conopophila rufogularis

characteristic: organism

text: tissue

text: muscle

text: Model organism or animal sample from Conopophila rufogularis


text: University of New Mexico

text: live

text: Model organism or animal

text: Australia: New South Wales

text: Dasyornis brachypterus

text: tissue

text: muscle

text: Model organism or animal sample from Dasyornis brachypterus

characteristic: title


text: University of New Mexico

text: live

text: Model organism or animal

characteristic: NCBI submission package

text: Australia: Queensland

text: Entomyzon cyanotis

text: tissue

text: muscle

text: Model organism or animal sample from Entomyzon cyanotis


text: University of New Mexico

text: live

text: Model organism or animal

text: Australia: South Australia

text: Epthianura albifrons

text: tissue

text: muscle

text: Model organism or animal sample from Epthianura albifrons


text: University of New Mexico

text: live

text: Model organism or animal

text: Australia: Western Australia

text: Gavicalis virescens

text: tissue

text: muscle

text: Model organism or animal sample from Gavicalis virescens


text: University of New Mexico

text: live

text: Model organism or animal

text: Australia: Western Australia

text: Gerygone fusca

text: tissue

text: muscle

text: Model organism or animal sample from Gerygone fusca


text: University of New Mexico

text: live

text: Model organism or animal

text: Australia: Western Australia

text: Gliciphila melanops

text: tissue

text: muscle

text: Model organism or animal sample from Gliciphila melanops


text: University of New Mexico

text: live

text: Model organism or animal

text: Australia: Queensland

text: Glycichaera fallax

text: tissue

text: muscle

text: Model organism or animal sample from Glycichaera fallax


text: University of New Mexico

text: live

text: Model organism or animal

text: Vanuatu: Torba; Vanua Lava Island

text: Glycifohia notabilis

text: tissue

text: muscle

text: Model organism or animal sample from Glycifohia notabilis


text: University of New Mexico

text: live

text: Model organism or animal

text: Australia: Queensland

text: Grantiella picta

text: tissue

text: muscle

text: Model organism or animal sample from Grantiella picta


text: University of New Mexico

text: live

text: Model organism or animal

text: Solomon Islands: Guadalcanal; Guadalcanal Island

text: Guadalcanaria inexpectata

text: tissue

text: muscle

text: Model organism or animal sample from Guadalcanaria inexpectata


text: University of New Mexico

text: live

text: Model organism or animal

text: New Caledonia

text: Gymnomyza aubryana

text: toepad

text: toepad

text: Model organism or animal sample from Gymnomyza aubryana


text: University of New Mexico

text: live

text: Model organism or animal

text: Samoa: Upolu Island

text: Gymnomyza samoensis

text: toepad

text: toepad

text: Model organism or animal sample from Gymnomyza samoensis


text: University of New Mexico

text: live

text: Model organism or animal

text: Fiji: Northern; Taveuni Island

text: Gymnomyza viridis

text: tissue

text: muscle

text: Model organism or animal sample from Gymnomyza viridis


text: University of New Mexico

text: live

text: Model organism or animal

text: Australia: New South Wales

text: Lichenostomus melanops

text: tissue

text: muscle

text: Model organism or animal sample from Lichenostomus melanops


text: University of New Mexico

text: live

text: Model organism or animal

text: Australia: Queensland

text: Lichmera indistincta

text: tissue

text: muscle

text: Model organism or animal sample from Lichmera indistincta


text: University of New Mexico

text: live

text: Model organism or animal

text: Indonesia: Papua

text: Macgregoria pulchra

text: toepad

text: toepad

text: Model organism or animal sample from Macgregoria pulchra


text: University of New Mexico

text: live

text: Model organism or animal

text: Australia: New South Wales

text: Manorina melanocephala

text: tissue

text: muscle

text: Model organism or animal sample from Manorina melanocephala


text: University of New Mexico

text: live

text: Model organism or animal

text: Solomon Islands: Makira-Ulawa; Makira Island

text: Meliarchus sclateri

text: tissue

text: muscle

text: Model organism or animal sample from Meliarchus sclateri


text: University of New Mexico

text: live

text: Model organism or animal

text: Papua New Guinea: Southern Highlands

text: Melionyx fuscus

text: tissue

text: muscle

text: Model organism or animal sample from Melionyx fuscus


text: University of New Mexico

text: live

text: Model organism or animal

text: Papua New Guinea: East Highlands

text: Melidectes torquatus

text: tissue

text: muscle

text: Model organism or animal sample from Melidectes torquatus


text: University of New Mexico

text: live

text: Model organism or animal

text: Papua New Guinea: West Sepik

text: Melilestes megarhynchus

text: tissue

text: muscle

text: Model organism or animal sample from Melilestes megarhynchus


text: University of New Mexico

text: live

text: Model organism or animal

text: Australia: Queensland

text: Meliphaga notata

text: tissue

text: muscle

text: Model organism or animal sample from Meliphaga notata


text: University of New Mexico

text: live

text: Model organism or animal

text: Papua New Guinea: Southern Highlands

text: Melipotes fumigatus

text: tissue

text: muscle

text: Model organism or animal sample from Melipotes fumigatus


text: University of New Mexico

text: live

text: Model organism or animal

text: Australia: New South Wales

text: Melithreptus lunatus

text: tissue

text: muscle

text: Model organism or animal sample from Melithreptus lunatus


text: University of New Mexico

text: live

text: Model organism or animal

text: Indonesia: North Maluku; Bacan Island

text: Melitograis gilolensis

text: toepad

text: toepad

text: Model organism or animal sample from Melitograis gilolensis


text: University of New Mexico

text: live

text: Model organism or animal

text: Indonesia: West Sulawesi; Sulawesi Island

text: Myza celebensis

text: tissue

text: muscle

text: Model organism or animal sample from Myza celebensis


text: University of New Mexico

text: live

text: Model organism or animal

text: Fiji: Northern; Vanua Levu Island

text: Myzomela jugularis

text: tissue

text: muscle

text: Model organism or animal sample from Myzomela jugularis


text: University of New Mexico

text: live

text: Model organism or animal

text: Papua New Guinea: Southern Highlands

text: Myzomela rosenbergii

text: tissue

text: muscle

text: Model organism or animal sample from Myzomela rosenbergii


text: University of New Mexico

text: live

text: Model organism or animal

text: Australia: South Australia

text: Nesoptilotis leucotis

text: tissue

text: muscle

text: Model organism or animal sample from Nesoptilotis leucotis


text: University of New Mexico

text: live

text: Model organism or animal

text: Indonesia: Papua

text: Oreornis chrysogenys

text: toepad

text: toepad

text: Model organism or animal sample from Oreornis chrysogenys


text: University of New Mexico

text: live

text: Model organism or animal

text: Australia: Northern Territory

text: Philemon buceroides

text: tissue

text: muscle

text: Model organism or animal sample from Philemon buceroides


text: University of New Mexico

text: live

text: Model organism or animal

text: Australia: Western Australia

text: Phylidonyris novaehollandiae

text: tissue

text: muscle

text: Model organism or animal sample from Phylidonyris novaehollandiae


text: University of New Mexico

text: live

text: Model organism or animal

text: Australia: New South Wales

text: Plectorhyncha lanceolata

text: tissue

text: muscle

text: Model organism or animal sample from Plectorhyncha lanceolata


text: University of New Mexico

text: live

text: Model organism or animal

text: New Zealand: North Island

text: Prosthemadera novaeseelandiae

text: tissue

text: muscle

text: Model organism or animal sample from Prosthemadera novaeseelandiae


text: University of New Mexico

text: live

text: Model organism or animal

text: Papua New Guinea: Western

text: Ptiloprora guisei

text: tissue

text: muscle

text: Model organism or animal sample from Ptiloprora guisei


text: University of New Mexico

text: live

text: Model organism or animal

text: Australia: New South Wales

text: Ptilotula penicillata

text: tissue

text: muscle

text: Model organism or animal sample from Ptilotula penicillata


text: University of New Mexico

text: live

text: Model organism or animal

text: Australia: Western Australia

text: Purnella albifrons

text: tissue

text: muscle

text: Model organism or animal sample from Purnella albifrons


text: University of New Mexico

text: live

text: Model organism or animal

text: Papua New Guinea: Madang

text: Pycnopygius cinereus

text: tissue

text: muscle

text: Model organism or animal sample from Pycnopygius cinereus


text: University of New Mexico

text: live

text: Model organism or animal

text: Australia: Queensland

text: Ramsayornis fasciatus

text: tissue

text: muscle

text: Model organism or animal sample from Ramsayornis fasciatus


text: University of New Mexico

text: live

text: Model organism or animal

text: Australia: Queensland

text: Stomiopera unicolor

text: tissue

text: muscle

text: Model organism or animal sample from Stomiopera unicolor


text: University of New Mexico

text: live

text: Model organism or animal

text: Papua New Guinea: Bougainville Island

text: Stresemannia bougainvillei

text: tissue

text: muscle

text: Model organism or animal sample from Stresemannia bougainvillei


text: University of New Mexico

text: live

text: Model organism or animal

text: Australia: New South Wales

text: Sugomel niger

text: tissue

text: muscle

text: Model organism or animal sample from Sugomel niger


text: University of New Mexico

text: live

text: Model organism or animal

text: Australia: Queensland

text: Trichodere cockerelli

text: tissue

text: muscle

text: Model organism or animal sample from Trichodere cockerelli


text: University of New Mexico

text: live

text: Model organism or animal

text: Papua New Guinea: West New Britain; New Britain Island

text: Vosea whitemanensis

text: tissue

text: muscle

text: Model organism or animal sample from Vosea whitemanensis


text: University of New Mexico

text: live

text: Model organism or animal

text: Australia: Queensland

text: Xanthotis flaviventer

text: tissue

text: muscle

text: Model organism or animal sample from Xanthotis flaviventer


name: biological soil crust from Chicken Creek, sampling time 1, replicate 1

text: Helmholtz Zentrum Muenchen

text: live

text: Metagenome or environmental

characteristic: collection date

text: Biological soil crust grown on the bulk soil from the Chicken Creek catchment and sampled after four months of incubation, replicate 1

text: Germany: Chicken Creek

text: biological soil crust

characteristic: isolation source

text: 51.36 N 14.15 E

characteristic: lat lon

text: biocrust metagenome

text: DNA was extracted using the ‘Genomic DNA from soil’ NucleoSpin Soil Kit (Macherey-Nagel, DE). DNA was sheared using an E220 Focused-ultrasonicator (Covaris, USA). Library preparation was performed using the NEBNext Ultra DNA Library Prep Kit for Illumina and the NEBNext Multiplex Oligos for Illumina (both New England Biolabs, UK). Sequencing was performed on a MiSeq sequencer using a MiSeq Reagent Kit v3 for 600 cycle (Illumina, USA).

characteristic: samp mat process

text: Metagenome or environmental sample from biocrust metagenome


name: biological soil crust from Chicken Creek, sampling time 1, replicate 2

text: Helmholtz Zentrum Muenchen

characteristic: INSDC center name

text: live

text: Metagenome or environmental

text: Biological soil crust grown on the bulk soil from the Chicken Creek catchment and sampled after four months of incubation, replicate 2

characteristic: description

text: Germany: Chicken Creek

characteristic: geo loc name

text: biological soil crust

text: 51.36 N 14.15 E

text: biocrust metagenome


name: biological soil crust from Chicken Creek, sampling time 1, replicate 3

text: Helmholtz Zentrum Muenchen

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: Biological soil crust grown on the bulk soil from the Chicken Creek catchment and sampled after four months of incubation, replicate 3

text: Germany: Chicken Creek

text: biological soil crust

text: 51.36 N 14.15 E

text: biocrust metagenome


name: biological soil crust from Chicken Creek, sampling time 2, replicate 1

text: Helmholtz Zentrum Muenchen

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: Biological soil crust grown on the bulk soil from the Chicken Creek catchment and sampled after ten months of incubation, replicate 1

text: Germany: Chicken Creek

text: biological soil crust

text: 51.36 N 14.15 E

text: biocrust metagenome


name: biological soil crust from Chicken Creek, sampling time 2, replicate 2

characteristic: External Id

text: Helmholtz Zentrum Muenchen

text: live

text: Metagenome or environmental

text: Biological soil crust grown on the bulk soil from the Chicken Creek catchment and sampled after ten months of incubation, replicate 2

text: Germany: Chicken Creek

text: biological soil crust

text: 51.36 N 14.15 E

text: biocrust metagenome


name: biological soil crust from Chicken Creek, sampling time 2, replicate 3

text: Helmholtz Zentrum Muenchen

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: Biological soil crust grown on the bulk soil from the Chicken Creek catchment and sampled after ten months of incubation, replicate 3

text: Germany: Chicken Creek

text: biological soil crust

text: 51.36 N 14.15 E

text: biocrust metagenome


name: biological soil crust from Lieberose, sampling time 1, replicate 1

text: Helmholtz Zentrum Muenchen

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

text: Biological soil crust grown on the bulk soil from the Lieberose sand dune and sampled after four months of incubation, replicate 1

text: Germany: Lieberose

text: biological soil crust

text: 51.55 N 14.22 E

text: biocrust metagenome


name: biological soil crust from Lieberose, sampling time 1, replicate 2

text: Helmholtz Zentrum Muenchen

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: Biological soil crust grown on the bulk soil from the Lieberose sand dune and sampled after four months of incubation, replicate 2

text: Germany: Lieberose

text: biological soil crust

text: 51.55 N 14.22 E

text: biocrust metagenome


name: biological soil crust from Lieberose, sampling time 1, replicate 3

text: Helmholtz Zentrum Muenchen

text: live

text: Metagenome or environmental

text: Biological soil crust grown on the bulk soil from the Lieberose sand dune and sampled after four months of incubation, replicate 3

text: Germany: Lieberose

text: biological soil crust

text: 51.55 N 14.22 E

text: biocrust metagenome

characteristic: organism


name: biological soil crust from Lieberose, sampling time 2, replicate 1

text: Helmholtz Zentrum Muenchen

text: live

text: Metagenome or environmental

text: Biological soil crust grown on the bulk soil from the Lieberose sand dune and sampled after ten months of incubation, replicate 1

text: Germany: Lieberose

text: biological soil crust

text: 51.55 N 14.22 E

text: biocrust metagenome

characteristic: title


name: biological soil crust from Lieberose, sampling time 2, replicate 2

text: Helmholtz Zentrum Muenchen

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Biological soil crust grown on the bulk soil from the Lieberose sand dune and sampled after ten months of incubation, replicate 2

text: Germany: Lieberose

text: biological soil crust

text: 51.55 N 14.22 E

text: biocrust metagenome


name: biological soil crust from Lieberose, sampling time 2, replicate 3

text: Helmholtz Zentrum Muenchen

text: live

text: Metagenome or environmental

characteristic: collection date

text: Biological soil crust grown on the bulk soil from the Lieberose sand dune and sampled after ten months of incubation, replicate 3

text: Germany: Lieberose

text: biological soil crust

text: 51.55 N 14.22 E

text: biocrust metagenome


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Blood (plasma layer)

characteristic: body site

text: HMB-IRB

text: Plasma: Castration Resistant Prostate Adenocarcinoma

characteristic: histological type

text: Yes

characteristic: is tumor

text: Homo sapiens

text: male

characteristic: sex

text: Prospective Longitudinal Cohort

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Tumor DNA sample from Blood (plasma layer) of a human male participant in the dbGaP study Genomics and Methylation of Neuroendocrine Prostate Cancer from cfDNA (Cornell/Trento 2019)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: DNA

text: Blood (plasma layer)

text: HMB-IRB

text: Plasma: Neuroendocrine Prostate Cancer

text: Yes

text: Homo sapiens

text: male

text: Prospective Longitudinal Cohort

text: Genomics and Methylation of Neuroendocrine Prostate Cancer from cfDNA (Cornell/Trento 2019)


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Blood (plasma layer)

characteristic: body site

text: HMB-IRB

text: Plasma: Hormone Naive Prostate Cancer

text: Yes

text: Homo sapiens

characteristic: organism

text: male

text: Prospective Longitudinal Cohort

characteristic: title


text: dbGaP

text: live

text: Generic

text: DNA

text: Blood (buffy coat)

text: HMB-IRB

text: Peripheral blood mononuclear cell (PBMC)

characteristic: histological type

text: No

characteristic: is tumor

text: Homo sapiens

text: male

characteristic: sex

text: Prospective Longitudinal Cohort

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

text: Non-tumor DNA sample from Blood (buffy coat) of a human male participant in the dbGaP study Genomics and Methylation of Neuroendocrine Prostate Cancer from cfDNA (Cornell/Trento 2019)


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: DNA

text: Blood (plasma layer)

text: HMB-IRB

text: Yes

text: Homo sapiens

text: male

text: Prospective Longitudinal Cohort

characteristic: submitter handle


name: Methylococcus capsulatus VKPM-B-12549 (GBS-15)

text: Giprobiosintez

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Methylococcus capsulatus

text: Cell culture

characteristic: strain

text: Microbe sample from Methylococcus capsulatus


name: Cupriavidus gilardii VKM-3265D (GBS-15-1)

text: Giprobiosintez

text: live

text: Microbe, viral or environmental

text: Cupriavidus gilardii

characteristic: organism

text: Cell culture

text: Microbe sample from Cupriavidus gilardii

characteristic: title


name: Stenotrophomonas acidaminiphila VKM-3264D (GBS-15-2)

text: Giprobiosintez

text: live

text: Microbe, viral or environmental

text: Stenotrophomonas acidaminiphila

text: Cell culture

text: Microbe sample from Stenotrophomonas acidaminiphila


name: Klebsiella pneumoniae SCPM-B-8465 (1-17)

text: Giprobiosintez

text: live

text: Microbe, viral or environmental

text: Klebsiella pneumoniae

text: Cell culture

text: Microbe sample from Klebsiella pneumoniae


Ensifer alkalisoli

text: Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences Beijing

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: China:Dongying Yellow River delta, Shandong

characteristic: geo loc name

text: root nodule of Sesbania cannabina

characteristic: isolation source

text: Sinorhizobium alkalisoli

text: single cell

characteristic: sample type

text: Microbe sample from Ensifer alkalisoli

text: type strain of Ensifer alkalisoli

characteristic: type material


characteristic: External Id

text: Chinese Academy of Sciences

characteristic: INSDC center name

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.host-associated

text: commensal

characteristic: biotic relationship

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: biological enviorment

text: intestine enviorment

text: animal manure

text: China:Beijing

text: mouse

characteristic: host

text: mGAM medium at 37 centigrade

text: 39.59 N 116.23 E

characteristic: lat lon

text: Thomasclavelia cocleata

text: no available

text: MIGS Cultured Bacterial/Archaeal sample from [Clostridium] cocleatum


text: Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: 0.62 M

characteristic: alkalinity (carbonate/bicarbonate)

characteristic: environmental sample

text: Russia: Kulunda Steppe

characteristic: isolate

text: hypersaline soda lake brine

text: 52.11 N 79.17 E

text: soda lake metagenome

characteristic: metagenome source

characteristic: metagenomic

text: This BioSample is a metagenomic assembly obtained from the CS-Br16 metagenome BioSample: SAMN08987116.

characteristic: note

text: Paracoccaceae bacterium

characteristic: ph

text: 55 g/L

characteristic: salinity

text: metagenomic assembly

text: Microbe sample from Paracoccaceae bacterium


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission package

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Bone Marrow Normal

characteristic: body site

text: DS-PEDCR

text: ALL

characteristic: histological type

text: No

characteristic: is tumor

text: Homo sapiens

characteristic: organism

text: male

characteristic: sex

text: Tumor vs. Matched-Normal

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Non-tumor DNA sample from Bone Marrow Normal of a human male participant in the dbGaP study TARGET: Acute Lymphoblastic Leukemia (ALL) Expansion Phase 2

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: DNA

text: DS-PEDCR

text: ALL

text: Yes

text: Homo sapiens

text: male

text: Tumor vs. Matched-Normal

text: Tumor DNA sample from Primary Blood Derived Cancer - Peripheral Blood of a human male participant in the dbGaP study TARGET: Acute Lymphoblastic Leukemia (ALL) Expansion Phase 2


characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: 0.62 M

characteristic: alkalinity (carbonate/bicarbonate)

characteristic: collection date

characteristic: environmental sample

text: Russia: Kulunda Steppe

characteristic: geo loc name

characteristic: isolate

text: hypersaline soda lake sediment

characteristic: isolation source

text: 52.11 N 79.17 E

characteristic: lat lon

text: soda lake metagenome

characteristic: metagenome source

characteristic: metagenomic

text: This BioSample is a metagenomic assembly obtained from the CS-Sed16-2cmA metagenome BioSample: SAMN08987117.

characteristic: note

text: Paracoccaceae bacterium

characteristic: ph

text: 55 g/L

characteristic: salinity

text: metagenomic assembly

characteristic: sample type


characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: 0.62 M

text: Russia: Kulunda Steppe

text: hypersaline soda lake sediment

text: 52.11 N 79.17 E

text: soda lake metagenome

text: Gemmatimonadota bacterium

characteristic: organism

text: 55 g/L

text: metagenomic assembly

text: Microbe sample from Gemmatimonadota bacterium

characteristic: title


characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 0.62 M

characteristic: alkalinity (carbonate/bicarbonate)

characteristic: collection date

characteristic: environmental sample

text: Russia: Kulunda Steppe

text: hypersaline soda lake sediment

text: 52.11 N 79.17 E

text: soda lake metagenome

text: Kiritimatiellia bacterium

text: 55 g/L

text: metagenomic assembly

text: Microbe sample from Kiritimatiellia bacterium


text: live

text: Microbe, viral or environmental

text: 0.62 M

text: Russia: Kulunda Steppe

characteristic: geo loc name

characteristic: isolate

text: hypersaline soda lake sediment

characteristic: isolation source

text: 52.11 N 79.17 E

characteristic: lat lon

text: soda lake metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Bacillota bacterium

text: 55 g/L

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


characteristic: External Id

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: 0.62 M

text: Russia: Kulunda Steppe

text: hypersaline soda lake sediment

text: 52.11 N 79.17 E

text: soda lake metagenome

characteristic: note

text: Bacteroidota bacterium

characteristic: ph

text: 55 g/L

characteristic: salinity

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Bacteroidota bacterium


characteristic: INSDC center name

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: 0.62 M

text: Russia: Kulunda Steppe

text: hypersaline soda lake sediment

text: 52.11 N 79.17 E

text: soda lake metagenome

text: This BioSample is a metagenomic assembly obtained from the CS-Sed16-2cmB metagenome BioSample: SAMN08987118.

text: Kiritimatiellia bacterium

characteristic: organism

text: 55 g/L

text: metagenomic assembly

characteristic: title


text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: 0.62 M

characteristic: alkalinity (carbonate/bicarbonate)

characteristic: collection date

characteristic: environmental sample

text: Russia: Kulunda Steppe

characteristic: geo loc name

characteristic: isolate

text: hypersaline soda lake sediment

text: 52.11 N 79.17 E

text: soda lake metagenome

text: Gemmatimonadota bacterium

text: 55 g/L

text: metagenomic assembly


characteristic: External Id

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: 0.62 M

text: Russia: Kulunda Steppe

text: hypersaline soda lake sediment

characteristic: isolation source

text: 52.11 N 79.17 E

characteristic: lat lon

text: soda lake metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Paracoccaceae bacterium

text: 55 g/L

text: metagenomic assembly


characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: 0.62 M

text: Russia: Kulunda Steppe

text: hypersaline soda lake sediment

text: 52.11 N 79.17 E

text: soda lake metagenome

characteristic: note

text: Bacteroidota bacterium

characteristic: ph

text: 55 g/L

characteristic: salinity

text: metagenomic assembly

characteristic: sample type


text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 0.62 M

characteristic: alkalinity (carbonate/bicarbonate)

text: Russia: Kulunda Steppe

text: hypersaline soda lake sediment

text: 52.11 N 79.17 E

text: soda lake metagenome

text: Nodularia sp. (in: cyanobacteria)

characteristic: organism

text: 55 g/L

text: metagenomic assembly

text: Microbe sample from Nodularia sp. (in: cyanobacteria)

characteristic: title


characteristic: External Id

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: 0.62 M

characteristic: collection date

characteristic: environmental sample

text: Russia: Kulunda Steppe

characteristic: geo loc name

characteristic: isolate

text: hypersaline soda lake sediment

text: 52.11 N 79.17 E

text: soda lake metagenome

text: Candidatus Brocadiia bacterium

text: Brocadiae bacterium

characteristic: original-organism-name

text: 55 g/L

text: metagenomic assembly

text: Microbe sample from Candidatus Brocadiia bacterium


characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: 0.62 M

text: Russia: Kulunda Steppe

text: hypersaline soda lake sediment

characteristic: isolation source

text: 52.11 N 79.17 E

characteristic: lat lon

text: soda lake metagenome

characteristic: metagenome source

characteristic: metagenomic

characteristic: note

text: Bacillota bacterium

text: 55 g/L

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 0.62 M

characteristic: alkalinity (carbonate/bicarbonate)

text: Russia: Kulunda Steppe

text: hypersaline soda lake sediment

text: 52.11 N 79.17 E

text: soda lake metagenome

text: Caldisericota bacterium

text: Caldisericia bacterium

characteristic: ph

text: 55 g/L

characteristic: salinity

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Caldisericota bacterium


characteristic: External Id

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: 0.62 M

characteristic: collection date

characteristic: environmental sample

text: Russia: Kulunda Steppe

characteristic: geo loc name

text: hypersaline soda lake sediment

text: 52.11 N 79.17 E

text: soda lake metagenome

text: This BioSample is a metagenomic assembly obtained from the CS-Sed16-5cm metagenome BioSample: SAMN08987119.

text: Kiritimatiellia bacterium

characteristic: organism

text: 55 g/L

text: metagenomic assembly

characteristic: title


characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: 0.62 M

text: Russia: Kulunda Steppe

characteristic: isolate

text: hypersaline soda lake sediment

characteristic: isolation source

text: 52.11 N 79.17 E

characteristic: lat lon

text: soda lake metagenome

characteristic: metagenome source

text: Gemmatimonadota bacterium

text: 55 g/L

text: metagenomic assembly


text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 0.62 M

characteristic: alkalinity (carbonate/bicarbonate)

text: Russia: Kulunda Steppe

text: hypersaline soda lake sediment

text: 52.11 N 79.17 E

text: soda lake metagenome

characteristic: metagenomic

characteristic: note

text: Candidatus Omnitrophota bacterium

text: Omnitrophica bacterium

characteristic: original-organism-name

text: 55 g/L

text: metagenomic assembly

text: Microbe sample from Candidatus Omnitrophota bacterium


characteristic: External Id

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: 0.62 M

characteristic: collection date

characteristic: environmental sample

text: Russia: Kulunda Steppe

text: hypersaline soda lake sediment

text: 52.11 N 79.17 E

text: soda lake metagenome

text: Bacteroidota bacterium

characteristic: ph

text: 55 g/L

characteristic: salinity

text: metagenomic assembly

characteristic: sample type


characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: 0.62 M

text: Russia: Kulunda Steppe

characteristic: geo loc name

characteristic: isolate

text: hypersaline soda lake sediment

characteristic: isolation source

text: 52.11 N 79.17 E

text: soda lake metagenome

text: Paracoccaceae bacterium

characteristic: organism

text: 55 g/L

text: metagenomic assembly

characteristic: title


text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 0.62 M

characteristic: alkalinity (carbonate/bicarbonate)

text: Russia: Kulunda Steppe

text: hypersaline soda lake sediment

text: 52.11 N 79.17 E

characteristic: lat lon

text: soda lake metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Armatimonadota bacterium

text: 55 g/L

text: metagenomic assembly

text: Microbe sample from Armatimonadota bacterium


characteristic: External Id

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: 0.62 M

characteristic: collection date

characteristic: environmental sample

text: Russia: Kulunda Steppe

text: hypersaline soda lake sediment

text: 52.11 N 79.17 E

text: soda lake metagenome

characteristic: note

text: Bacillus sp. (in: firmicutes)

characteristic: ph

text: 55 g/L

text: metagenomic assembly

text: Microbe sample from Bacillus sp. (in: firmicutes)


text: Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: 0.62 M

text: Russia: Kulunda Steppe

characteristic: geo loc name

characteristic: isolate

text: hypersaline soda lake sediment

text: 52.11 N 79.17 E

text: soda lake metagenome

text: Candidatus Brocadiia bacterium

text: Brocadiae bacterium

characteristic: original-organism-name

text: 55 g/L

characteristic: salinity

text: metagenomic assembly

characteristic: sample type


text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 0.62 M

characteristic: alkalinity (carbonate/bicarbonate)

text: Russia: Kulunda Steppe

text: hypersaline soda lake sediment

characteristic: isolation source

text: 52.11 N 79.17 E

text: soda lake metagenome

text: Bacillota bacterium

characteristic: organism

text: 55 g/L

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium

characteristic: title


characteristic: External Id

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: 0.62 M

characteristic: collection date

characteristic: environmental sample

text: Russia: Kulunda Steppe

text: hypersaline soda lake sediment

text: 52.11 N 79.17 E

characteristic: lat lon

text: soda lake metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Caldisericota bacterium

text: Caldisericia bacterium

text: 55 g/L

text: metagenomic assembly


text: Medical University of Vienna

characteristic: INSDC center name

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: SRA accession

text: ATCC

characteristic: collected by

text: susceptible

characteristic: description

text: Austria

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: Candidiasis

characteristic: host disease

text: ATCC 90030

characteristic: isolate

text: control strain

text: 48.21 N 16.34 E

text: Nakaseomyces glabratus

text: Pathogen: clinical or host-associated sample from Nakaseomyces glabratus


characteristic: External Id

text: Medical University of Vienna

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

text: ATCC

text: susceptible

text: Austria

text: Homo sapiens

text: Candidiasis

text: ATCC Y33.90

text: control strain

characteristic: isolation source

text: 48.21 N 16.34 E

text: Nakaseomyces glabratus

characteristic: organism

characteristic: title


text: Medical University of Vienna

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.cl

text: Medical University Innsbruck

characteristic: collection date

text: azole resistant

text: Austria

text: Homo sapiens

text: Candidiasis

text: blood culture

text: 47.26 N 11.38 E

characteristic: lat lon

text: Nakaseomyces glabratus


text: Medical University of Vienna

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: SRA accession

text: Medical University Innsbruck

characteristic: collected by

text: multi resistant

text: Austria

text: Homo sapiens

text: Candidiasis

text: blood culture

text: 47.26 N 11.38 E

text: Nakaseomyces glabratus


text: Medical University of Vienna

text: live

text: Pathogen.cl

text: Medical University Vienna

text: azole resistant

characteristic: description

text: Austria

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: Candidiasis

characteristic: host disease

text: sputum

text: 48.21 N 16.34 E

text: Nakaseomyces glabratus


characteristic: External Id

text: Medical University of Vienna

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

text: Medical University Vienna

text: azole resistant

text: Austria

text: Homo sapiens

text: Candidiasis

characteristic: isolate

text: urine

text: 48.21 N 16.34 E

text: Nakaseomyces glabratus


text: Medical University of Vienna

text: live

text: Pathogen.cl

characteristic: NCBI submission package

text: Medical University Vienna

text: azole resistant

text: Austria

text: Homo sapiens

text: Candidiasis

text: 48.21 N 16.34 E

text: Nakaseomyces glabratus

characteristic: organism

characteristic: title


text: Medical University of Vienna

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.cl

text: Medical University Vienna

characteristic: collection date

text: azole resistant

text: Austria

text: Homo sapiens

text: Candidiasis

text: vaginal swab

characteristic: isolation source

text: 48.21 N 16.34 E

text: Nakaseomyces glabratus


text: Medical University of Vienna

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: SRA accession

text: Medical University Vienna

text: azole resistant

text: Austria

text: Homo sapiens

text: Candidiasis

text: ascites

text: 48.21 N 16.34 E

characteristic: lat lon

text: Nakaseomyces glabratus


text: Medical University of Vienna

text: live

text: Pathogen.cl

text: Medical University Vienna

characteristic: collected by

text: azole resistant

characteristic: description

text: Austria

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: Candidiasis

text: feces

text: 48.21 N 16.34 E

text: Nakaseomyces glabratus


characteristic: External Id

text: Medical University of Vienna

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

text: Medical University Vienna

text: echinocandin resistant

text: Austria

text: Homo sapiens

text: Candidiasis

characteristic: host disease

text: P 4079

text: catheter

text: 48.21 N 16.34 E

text: Nakaseomyces glabratus


text: Medical University of Vienna

text: live

text: Pathogen.cl

characteristic: NCBI submission package

text: Medical University Vienna

text: susceptible

text: Austria

text: Homo sapiens

text: Candidiasis

text: B 9015

characteristic: isolate

text: blood culture

text: 48.21 N 16.34 E

text: Nakaseomyces glabratus

characteristic: organism

characteristic: title


text: Medical University of Vienna

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.cl

text: University Hospital Essen

text: susceptible

text: Germany

text: Homo sapiens

text: Candidiasis

text: blood culture

characteristic: isolation source

text: 51.43 N 6.98 E

text: Nakaseomyces glabratus


text: Medical University of Vienna

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: SRA accession

text: Medical University Vienna

characteristic: collection date

text: echinocandin resistant

text: Austria

text: Homo sapiens

text: Candidiasis

text: drainage fluid

text: 48.21 N 16.34 E

text: Nakaseomyces glabratus


text: Medical University of Vienna

text: live

text: Pathogen.cl

text: Medical University Vienna

characteristic: collected by

text: multi resistant

characteristic: description

text: Austria

characteristic: geo loc name

text: Homo sapiens

text: Candidiasis

text: A 7013

text: tracheal fluid

text: 48.21 N 16.34 E

characteristic: lat lon

text: Nakaseomyces glabratus


characteristic: External Id

text: Medical University of Vienna

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

text: Medical University Vienna

text: multi resistant

text: Austria

text: Homo sapiens

characteristic: host

text: Candidiasis

text: P 4066

text: feces

text: 48.21 N 16.34 E

text: Nakaseomyces glabratus


text: Medical University of Vienna

text: live

text: Pathogen.cl

characteristic: NCBI submission package

text: Medical University Vienna

text: multi resistant

text: Austria

text: Homo sapiens

text: Candidiasis

characteristic: host disease

characteristic: isolate

text: 48.21 N 16.34 E

text: Nakaseomyces glabratus

characteristic: organism


text: Medical University of Vienna

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.cl

text: Medical University Vienna

text: multi resistant

text: Austria

text: Homo sapiens

text: Candidiasis

text: urine

characteristic: isolation source

text: 48.21 N 16.34 E

text: Nakaseomyces glabratus

characteristic: title


text: Medical University of Vienna

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: SRA accession

text: Medical University Vienna

text: echinocandin resistant

text: Austria

text: Homo sapiens

text: Candidiasis

text: 109I MK

text: blood culture

text: 48.21 N 16.34 E

text: Nakaseomyces glabratus


text: Oncology/Hematology, Boston Children's Hospital

text: live

text: Generic

text: Endothelial cells

characteristic: cell type

characteristic: genotype/variation

text: Danio rerio

text: kdrl:mCherry; mrc1a:GFP transgenic zebrafish embryos (wild-type)

text: kdrl:mCherry+mrc1a:GFP+_Rep 1


characteristic: External Id

text: live

text: Generic

text: 72 hpf

characteristic: developmental stage

text: Danio rerio

text: mpx:GFP transgenic zebrafish embryo (wild-type, Casper background)

text: tail

characteristic: tissue

text: Tomo-seq_zebrafish tail at 72 hpf


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: 72 hpf

text: kdrl:GFP+

text: Danio rerio

text: kdrl:GFP transgenic zebrafish embryos (wild-type)

text: whole embryo

text: kdrl:GFP+, 72 hpf


text: live

text: Generic

characteristic: NCBI submission package

text: 72 hpf

text: kdrl:mCherry+;sele:GFP+

text: Danio rerio

text: kdrl:mCherry; sele:GFP transgenic zebrafish embryos (wild-type)

text: whole embryos

text: kdrl:mCherry+;sele:GFP+, 72 hpf


text: live

text: Generic

text: 72 hpf

text: kdrl:GFP -

text: Danio rerio

text: whole embryos

text: kdrl:GFP -, 72 hpf


text: live

text: Generic

text: 72 hpf

text: kdrl:GFP +

text: Danio rerio

text: whole embryos

text: kdrl:GFP +, 72 hpf


text: live

text: Generic

text: Combined, remaining transgene negative portion of the embryo

text: Danio rerio

text: kdrl:mCherry-mrc1a:GFP-_Rep 3


text: live

text: Generic

text: Danio rerio

text: kdrl:mCherry-mrc1a:GFP-_Rep 2


text: live

text: Generic

text: Danio rerio

text: kdrl:mCherry-mrc1a:GFP-_Rep 1


text: live

text: Generic

text: Mesenchymal cells in tail fin

text: Danio rerio

text: kdrl:mCherry-mrc1a:GFP+_Rep 3


text: live

text: Generic

text: Mesenchymal cells in tail fin

text: Danio rerio

text: kdrl:mCherry-mrc1a:GFP+_Rep 2


text: live

text: Generic

text: Mesenchymal cells in tail fin

text: Danio rerio

text: kdrl:mCherry-mrc1a:GFP+_Rep 1


text: live

text: Generic

text: Endothelial cells

text: Danio rerio

text: kdrl:mCherry+mrc1a:GFP-_Rep 3


text: live

text: Generic

text: Endothelial cells

text: Danio rerio

text: kdrl:mCherry+mrc1a:GFP-_Rep 2


text: live

text: Generic

text: Endothelial cells

text: Danio rerio

text: kdrl:mCherry+mrc1a:GFP-_Rep 1


text: live

text: Generic

text: Endothelial cells

text: Danio rerio

text: kdrl:mCherry+mrc1a:GFP+_Rep 3


text: live

text: Generic

text: Endothelial cells

text: Danio rerio

text: kdrl:mCherry+mrc1a:GFP+_Rep 2


text: University of Washington

text: live

text: Viral

text: USA

characteristic: geo loc name

text: Homo sapiens

characteristic: host

characteristic: isolate

text: bronchoalveolar lavage

text: Rhinovirus A


text: University of Washington

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Viral

text: USA

text: Homo sapiens

text: bronchoalveolar lavage

text: Rhinovirus B

characteristic: organism


text: University of Washington

characteristic: INSDC last update

text: live

text: Viral

text: USA

text: Homo sapiens

text: bronchoalveolar lavage

text: Rhinovirus C

characteristic: title


text: University of Washington

characteristic: INSDC secondary accession

text: live

text: Viral

characteristic: SRA accession

text: USA

text: Homo sapiens

text: Nasal wash

text: Rhinovirus A


text: University of Washington

text: live

text: Viral

text: USA

text: Homo sapiens

text: Nasal wash

text: Rhinovirus B


text: University of Washington

text: live

text: Viral

text: USA

text: Homo sapiens

text: Nasal wash

text: Rhinovirus C


text: South China Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: China: Guangzhou

text: crab H1

text: microbiota

text: crab gut H1

characteristic: isolation source

text: Pseudomonadota

text: tissue sample

characteristic: sample type

text: Microbe sample from Pseudomonadota


characteristic: External Id

text: live

text: Microbe, viral or environmental

text: China: Guangzhou

text: crab H2

text: microbiota

text: crab gut H2

text: Pseudomonadota

text: tissue sample

text: Microbe sample from Pseudomonadota


text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: China: Guangzhou

text: crab H3

text: microbiota

text: crab gut H3

text: Pseudomonadota

text: tissue sample

text: Microbe sample from Pseudomonadota


text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: China: Guangzhou

text: crab H4

text: microbiota

text: crab gut H4

text: Pseudomonadota

text: tissue sample

text: Microbe sample from Pseudomonadota


text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: China: Guangzhou

text: crab H5

text: microbiota

text: crab gut H5

text: Pseudomonadota

text: tissue sample

text: Microbe sample from Pseudomonadota


text: live

text: Microbe, viral or environmental

text: China: Guangzhou

characteristic: geo loc name

text: crab D1

text: microbiota

text: crab gut D1

text: Pseudomonadota

text: tissue sample

text: Microbe sample from Pseudomonadota


text: live

text: Microbe, viral or environmental

text: China: Guangzhou

text: crab D2

characteristic: host

text: microbiota

text: crab gut D2

text: Pseudomonadota

text: tissue sample

text: Microbe sample from Pseudomonadota


text: live

text: Microbe, viral or environmental

text: China: Guangzhou

text: crab D3

text: microbiota

characteristic: isolate

text: crab gut D3

text: Pseudomonadota

text: tissue sample

text: Microbe sample from Pseudomonadota


characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: China: Guangzhou

text: crab D4

text: microbiota

text: crab gut D4

text: Pseudomonadota

text: tissue sample

text: Microbe sample from Pseudomonadota


characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: China: Guangzhou

text: crab D5

text: microbiota

text: crab gut D5

text: Pseudomonadota

text: tissue sample

text: Microbe sample from Pseudomonadota


text: Jill Banfield's Lab at Berkeley

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: anthropogenic terrestrial biome [ENVO:01000219]

text: waste water [ENVO:00002001]

text: anaerobic sludge [ENVO:00002129]

text: USA: Berkeley

text: 37.52 N 122.15 W

characteristic: lat lon

text: Acidobacteriota bacterium

characteristic: organism


text: Jill Banfield's Lab at Berkeley

characteristic: INSDC last update

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIGS:6.0

text: waste water [ENVO:00002001]

text: anaerobic sludge [ENVO:00002129]

text: USA: Berkeley

text: 37.52 N 122.15 W

text: Bacteroidota bacterium

characteristic: title


text: Jill Banfield's Lab at Berkeley

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.wastewater

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:6.0

text: waste water [ENVO:00002001]

text: anaerobic sludge [ENVO:00002129]

text: USA: Berkeley

text: 37.52 N 122.15 W

text: Chloroflexota bacterium


text: Jill Banfield's Lab at Berkeley

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIGS:6.0

text: waste water [ENVO:00002001]

text: anaerobic sludge [ENVO:00002129]

text: USA: Berkeley

text: 37.52 N 122.15 W

text: Pseudomonadota


text: Jill Banfield's Lab at Berkeley

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIGS:6.0

text: waste water [ENVO:00002001]

text: anaerobic sludge [ENVO:00002129]

text: anamox2_BJP_IG2103_Bacteroidetes_37_22_46_7_curated

text: USA: Berkeley

text: 37.52 N 122.15 W

text: Bacteroidota bacterium


text: Jill Banfield's Lab at Berkeley

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIGS:6.0

text: waste water [ENVO:00002001]

text: anaerobic sludge [ENVO:00002129]

text: USA: Berkeley

text: 37.52 N 122.15 W

text: Verrucomicrobiota


text: Jill Banfield's Lab at Berkeley

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIGS:6.0

text: waste water [ENVO:00002001]

text: anaerobic sludge [ENVO:00002129]

text: anamox3_BJP_IG2069_Ignavibacteriae_38_11_30_7_curated

text: USA: Berkeley

text: 37.52 N 122.15 W

text: Ignavibacteriota


text: Jill Banfield's Lab at Berkeley

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIGS:6.0

text: waste water [ENVO:00002001]

text: anaerobic sludge [ENVO:00002129]

text: USA: Berkeley

text: 37.52 N 122.15 W

text: Candidatus Omnitrophota


text: Jill Banfield's Lab at Berkeley

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.wastewater

text: Keywords: GSC:MIxS;MIGS:6.0

text: waste water [ENVO:00002001]

text: anaerobic sludge [ENVO:00002129]

text: LAC_NA07_RBG_16_RIF_CHLX_72_14_curated_75_20_curated

text: USA: Berkeley

text: 37.52 N 122.15 W

text: Chloroflexota bacterium


text: INTA

text: live

text: Microbe, viral or environmental

characteristic: environmental sample

text: Argentina: Vila, Santa Fe

text: first pond of the AUR serial dairy industry stabilization pond system

characteristic: isolation source

text: 31.201857 S 61.822226 W

text: wastewater metagenome

characteristic: metagenome source

characteristic: metagenomic

text: This BioSample is a metagenomic assembly obtained from the wastewater metagenome BioSample: SAMN10523340

characteristic: note

text: Campylobacterota bacterium

text: Metagenomic assembly

text: Microbe sample from Campylobacterota bacterium


characteristic: External Id

text: INTA

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Argentina: San Carlos Sur

text: first pond of the CYC serial dairy industry stabilization pond system

text: 31.764734 S 61.108274 W

text: wastewater metagenome

text: This BioSample is a metagenomic assembly obtained from the wastewater metagenome BioSample: SAMN10523342

text: Pseudomonadota bacterium

text: Metagenomic assembly

characteristic: sample type

text: Microbe sample from Pseudomonadota bacterium


text: INTA

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: Argentina: San Carlos Sur

characteristic: geo loc name

characteristic: isolate

text: 31.764734 S 61.108274 W

text: wastewater metagenome

text: Campylobacterota bacterium

text: Metagenomic assembly


text: Institute of Oceanology, Chinese Academy of Sciences

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: China:Dongying

text: Apostichopus japonicus

characteristic: host

text: Paracoccaceae

characteristic: organism

text: whole organism


text: University of Washington Laboratory Medicine

text: live

text: Pathogen.cl

text: Stella Antonara

characteristic: collected by

characteristic: collection date

text: USA: Columbus

text: environmental

text: cystic fibrosis

characteristic: host disease

text: ice machine

characteristic: isolation source

text: 39.95 N 82.98 W

characteristic: lat lon

text: Mycolicibacterium porcinum

characteristic: strain

text: Pathogen: clinical or host-associated sample from Mycolicibacterium porcinum

characteristic: title


characteristic: External Id

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Stella Antonara

text: USA: Columbus

text: Homo sapiens

text: cystic fibrosis

text: CF

text: 39.95 N 82.98 W

text: Mycolicibacterium porcinum


Biological soil crusts

text: Fujian normal university

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Metagenome or environmental

characteristic: altitude

text: Bacterial communities were studies in biological soil crusts

characteristic: description

text: cyanobacterial crusts

characteristic: isolate

text: soil

text: biocrust metagenome

text: soil sample

characteristic: sample type

text: Microbe sample from Biological soil crusts


OKAORE

text: John McCutcheon

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Invertebrate

characteristic: SRA accession

text: 1030 m

text: Piotr Lukasik

characteristic: collected by

text: USA: MT, Missoula, slopes of Mt Sentinel

characteristic: geo loc name

text: OKAORE

text: bacteriome

text: 46.8570 N 113.9809 W

text: Okanagana oregona

characteristic: organism

text: male

characteristic: sex

text: bacteriome

characteristic: tissue

text: Okanagana oregona specimen OKAORE

type: derived-from


OKABEL

characteristic: External Id

text: John McCutcheon

text: live

characteristic: INSDC status

text: Invertebrate

text: 1030 m

text: Piotr Lukasik

characteristic: collection date

text: OKABEL

text: bacteriome

characteristic: isolation source

text: 46.8570 N 113.9809 W

characteristic: lat lon

text: Okanagana bella

text: male

text: bacteriome

text: Okanagana bella specimen OKABEL

characteristic: title


text: John McCutcheon

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 1030 m

characteristic: altitude

text: Piotr Lukasik

text: TRUE

characteristic: environmental-sample

text: Okanagana oregona

characteristic: host

text: bacteriome

text: 46.8570 N 113.9809 W

text: insect metagenome

characteristic: metagenome-source

text: TRUE

characteristic: metagenomic

text: Candidatus Hodgkinia cicadicola

text: metagenomic assembly

text: Candidatus Hodgkinia cicadicola strain OKAORE2, symbiont of Okanagana oregona specimen OKAORE


text: John McCutcheon

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: 1030 m

text: Piotr Lukasik

characteristic: collected by

text: TRUE

characteristic: geo loc name

text: Okanagana oregona

text: bacteriome

characteristic: isolate

text: 46.8570 N 113.9809 W

text: insect metagenome

text: TRUE

text: Candidatus Hodgkinia cicadicola

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Candidatus Hodgkinia cicadicola strain OKAORE3, symbiont of Okanagana oregona specimen OKAORE


characteristic: External Id

text: John McCutcheon

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: 1030 m

text: Piotr Lukasik

characteristic: collection date

text: TRUE

text: Okanagana oregona

text: bacteriome

text: 46.8570 N 113.9809 W

characteristic: lat lon

text: insect metagenome

text: TRUE

text: Candidatus Hodgkinia cicadicola

text: metagenomic assembly

text: Candidatus Hodgkinia cicadicola strain OKAORE4, symbiont of Okanagana oregona specimen OKAORE


text: John McCutcheon

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: 1030 m

text: Piotr Lukasik

text: TRUE

text: Okanagana oregona

text: bacteriome

text: 46.8570 N 113.9809 W

text: insect metagenome

text: TRUE

text: Candidatus Hodgkinia cicadicola

text: metagenomic assembly

text: Candidatus Hodgkinia cicadicola strain OKAORE1, symbiont of Okanagana oregona specimen OKAORE

characteristic: title


text: John McCutcheon

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: 1030 m

characteristic: altitude

text: Piotr Lukasik

text: Okanagana bella

characteristic: host

text: bacteriome

text: 46.8570 N 113.9809 W

text: Candidatus Hodgkinia cicadicola

text: metagenomic assembly

characteristic: strain

text: Candidatus Hodgkinia cicadicola strain OKABEL1a, symbiont of Okanagana bella specimen OKABEL


text: John McCutcheon

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: 1030 m

text: Piotr Lukasik

characteristic: collected by

text: Okanagana bella

text: bacteriome

text: 46.8570 N 113.9809 W

text: Candidatus Hodgkinia cicadicola

text: metagenomic assembly

text: Candidatus Hodgkinia cicadicola strain OKABEL1b, symbiont of Okanagana bella specimen OKABEL


text: John McCutcheon

text: live

text: Microbe, viral or environmental

text: 1030 m

text: Piotr Lukasik

characteristic: geo loc name

text: Okanagana bella

text: bacteriome

text: 46.8570 N 113.9809 W

text: Candidatus Hodgkinia cicadicola

text: metagenomic assembly

text: Candidatus Hodgkinia cicadicola strain OKABEL2, symbiont of Okanagana bella specimen OKABEL


text: John McCutcheon

text: live

text: Microbe, viral or environmental

text: J. Cooley

text: USA: MI, Pellston, University of Michigan Biological Station

text: Okanagana rimosa

text: bacteriome

text: 45.5498 N 84.7409 W

text: Candidatus Hodgkinia cicadicola

characteristic: organism

text: metagenomic assembly

text: Candidatus Hodgkinia cicadicola strain OKARIM2, symbiont of Okanagana rimosa specimen OKARIM


text: Tsinghua university

text: live

text: Human

text: ATCC

text: Homo sapiens

characteristic: treatment


characteristic: External Id

text: Tsinghua university

text: live

text: Human

text: ATCC

text: Homo sapiens

text: 167_SUPFIG10-V21-R-OPTIMIZED-2-GRNA-REP1


text: Tsinghua university

text: live

characteristic: INSDC status

text: Human

text: ATCC

text: Homo sapiens

text: 168_SUPFIG10-V21-R-OPTIMIZED-2-GRNA-REP2


text: Tsinghua university

text: live

text: Human

text: ATCC

text: Homo sapiens

text: 169_SUPFIG10-V21-R-HF-OPTIMIZED-2-GRNA-REP1


text: Tsinghua university

text: live

text: Human

text: ATCC

text: Homo sapiens

text: 170_SUPFIG10-V21-R-HF-OPTIMIZED-2-GRNA-REP2


text: Tsinghua university

text: live

text: Human

text: ATCC

text: Homo sapiens

text: 171_SUPFIG10-SACAS9-KKH-OPTIMIZED-2-GRNA-REP1


text: Tsinghua university

text: live

text: Human

text: ATCC

text: Homo sapiens

text: 172_SUPFIG10-SACAS9-KKH-OPTIMIZED-2-GRNA-REP2


text: Tsinghua university

text: live

text: Human

text: ATCC

text: Homo sapiens

text: 173_SUPFIG10-SACAS9-OPTIMIZED-2-GRNA-REP1


text: Tsinghua university

text: live

text: Human

text: ATCC

text: Homo sapiens

text: 174_SUPFIG10-SACAS9-OPTIMIZED-2-GRNA-REP2


text: Tsinghua university

text: live

text: Human

text: ATCC

text: Homo sapiens

text: 175_SUPFIG10-CONTROL-OPTIMIZED-2-GRNA-REP1


text: Tsinghua university

text: live

text: Human

text: ATCC

text: Homo sapiens

text: 176_SUPFIG10-CONTROL-OPTIMIZED-2-GRNA-REP2


stock A - resistance

text: Ocean University of China

text: live

text: Model organism or animal

text: 1 year

characteristic: age

text: turbot

characteristic: breed

text: Scophthalmus maximus

text: pooled male and female

characteristic: sex

text: muscle

characteristic: tissue

text: Scophthalmus maximus against Vibrio anguillarum resistance


Stock A - susceptible

text: Ocean University of China

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Model organism or animal

characteristic: NCBI submission model

text: 1 year

text: turbot

text: Scophthalmus maximus

text: pooled male and female

text: muscle

text: Model organism or animal sample from Scophthalmus maximus


Stock B - resistance

text: Ocean University of China

text: live

text: Model organism or animal

characteristic: NCBI submission package

text: 1 year

text: turbot

text: Scophthalmus maximus

text: pooled male and female

text: muscle

characteristic: title


Stock B - Susceptible

text: Ocean University of China

text: live

text: Model organism or animal

text: 1 year

text: turbot

text: Scophthalmus maximus

text: pooled male and female

text: muscle


Stock C - resistance

text: Ocean University of China

text: live

text: Model organism or animal

text: 1 year

text: turbot

text: Scophthalmus maximus

text: pooled male and female

text: muscle


Stock C - Susceptible

text: Ocean University of China

text: live

text: Model organism or animal

text: 1 year

text: turbot

text: Scophthalmus maximus

text: pooled male and female

text: muscle


Euplotes strain KKR18 from Kolleru Lake

text: University of Pisa

text: live

text: Microbe, viral or environmental

text: A laboratory strain of a novel species of the ciliate Euplotes isolated from Kolleru (India) with associated bacteria

characteristic: description

text: India: Lake of Kolleru

text: India:Lake of Kolleru

text: Euplotes sp. KKR18

text: mixed culture

characteristic: strain

text: Microbe sample from Euplotes sp. KKR18


text: University of East Anglia

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

characteristic: collection date

characteristic: environmental sample

text: United Kingdom: Norwich

text: Populus alba

characteristic: host

characteristic: isolate

text: Deciduous woodland, University campus

characteristic: isolation source

text: 52.6188 N 1.2451 E

characteristic: lat lon

text: phyllosphere metagenome

characteristic: metagenome source

characteristic: metagenomic

text: This BioSample is a metagenomic assembly obtained from the phyllosphere metagenome BioSamples: SAMN08913455, SAMN08913456, SAMN08913457, SAMN08913459

characteristic: note

text: Chloroflexota bacterium

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Chloroflexota bacterium


characteristic: External Id

text: University of East Anglia

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: United Kingdom: Norwich

characteristic: geo loc name

text: Populus alba

text: Deciduous woodland, University campus

text: 52.6188 N 1.2451 E

text: phyllosphere metagenome

text: Pseudomonadota bacterium

characteristic: organism

text: metagenomic assembly

text: Microbe sample from Pseudomonadota bacterium


text: University of East Anglia

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: United Kingdom: Norwich

text: Populus alba

text: Deciduous woodland, University campus

text: 52.6188 N 1.2451 E

text: phyllosphere metagenome

text: metagenomic assembly

text: Microbe sample from Rhodococcus sp. (in: high G+C Gram-positive bacteria)

characteristic: title


text: University of East Anglia

text: live

text: Microbe, viral or environmental

characteristic: collection date

characteristic: environmental sample

text: United Kingdom: Norwich

text: Populus alba

characteristic: host

characteristic: isolate

text: Deciduous woodland, University campus

text: 52.6188 N 1.2451 E

text: phyllosphere metagenome

text: Rhodococcus sp. (in: high G+C Gram-positive bacteria)

text: metagenomic assembly


Bacillus cereus phage_DK2

text: Guangdong Institute of Microbiology

text: live

text: Viral

text: China:GuangZhou

text: Bacillus cereus

text: Pearl River Water

text: river water

characteristic: isolation source

text: Bacillus cereus Bc233-1

characteristic: lab host

text: Caudoviricetes

text: Viral sample from Caudoviricetes


text: Schumacher's lab, Institute for Genome Stability in Ageing and Disease, CECAD Cologne

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: day-1 adult

characteristic: age

text: WM53 alg-2(ok304)

characteristic: genotype

text: Caenorhabditis elegans

text: whole animal

text: N2 Bristol

characteristic: strain/genotype

text: alg-2 IR 3

text: Ionizing radiation (90 Gy)

characteristic: treatment


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Generic

text: day-1 adult

text: WM53 alg-2(ok304)

text: Caenorhabditis elegans

characteristic: organism

text: whole animal

text: N2 Bristol

text: alg-2 IR 2

text: Ionizing radiation (90 Gy)


characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: day-1 adult

text: WM53 alg-2(ok304)

text: Caenorhabditis elegans

text: whole animal

text: N2 Bristol

text: alg-2 IR 1

characteristic: title

text: Ionizing radiation (90 Gy)


text: live

text: Generic

text: day-1 adult

text: WM53 alg-2(ok304)

text: Caenorhabditis elegans

text: whole animal

text: N2 Bristol

text: alg-2 Cont 3

text: Untreated


text: live

text: Generic

text: day-1 adult

text: WM53 alg-2(ok304)

text: Caenorhabditis elegans

text: whole animal

text: N2 Bristol

text: alg-2 Cont 2

text: Untreated


text: live

text: Generic

text: day-1 adult

text: WM53 alg-2(ok304)

text: Caenorhabditis elegans

text: whole animal

text: N2 Bristol

text: alg-2 Cont 1

text: Untreated


text: live

text: Generic

text: day-1 adult

text: wild type

text: Caenorhabditis elegans

text: whole animal

text: N2 Bristol

text: N2 IR 3

text: Ionizing radiation (90 Gy)


text: live

text: Generic

text: day-1 adult

text: wild type

text: Caenorhabditis elegans

text: whole animal

text: N2 Bristol

text: N2 IR 2

text: Ionizing radiation (90 Gy)


text: live

text: Generic

text: day-1 adult

text: wild type

text: Caenorhabditis elegans

text: whole animal

text: N2 Bristol

text: N2 IR 1

text: Ionizing radiation (90 Gy)


text: live

text: Generic

text: day-1 adult

text: wild type

text: Caenorhabditis elegans

text: whole animal

text: N2 Bristol

text: N2 Cont 3

text: Untreated


text: live

text: Generic

text: day-1 adult

text: wild type

text: Caenorhabditis elegans

text: whole animal

text: N2 Bristol

text: N2 Cont 2

text: Untreated


text: live

text: Generic

text: day-1 adult

text: wild type

text: Caenorhabditis elegans

text: whole animal

text: N2 Bristol

text: N2 Cont 1

text: Untreated


Panicum antidotale

text: live

text: Plant

text: 30 days

text: Retz.

characteristic: cultivar

text: Australia

characteristic: geo loc name

text: Janochloa antidotale

text: Leaf

characteristic: tissue

text: Panicum antidotale Leaf RNA-Seq


Bacillus cereus phage_DK1

text: Guangdong Institute of Microbiology

text: live

text: Viral

characteristic: collection date

text: China:GuangZhou

text: Bacillus cereus

characteristic: host

text: Pearl River Water

characteristic: isolate

text: river water

characteristic: isolation source

text: Bacillus cereus Bc233-1

characteristic: lab host

text: Caudoviricetes

text: phage genome

characteristic: sample type

text: Viral sample from Caudoviricetes


Bacillus cereus phage_DK3

characteristic: External Id

text: Guangdong Institute of Microbiology

characteristic: INSDC center name

text: live

text: Viral

text: China:GuangZhou

text: Bacillus cereus

text: Pearl River Water

text: river water

text: Bacillus cereus Bc233-1

text: Caudoviricetes

text: Viral sample from Caudoviricetes


AAADF

text: NIH Sequencing Center

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: retroauricular crease

text: Staphylococcus epidermidis

text: colony

text: AAADF

characteristic: strain

text: Microbe sample from Staphylococcus epidermidis


Paracoccus denitrificans

text: Guangdong Ocean University

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: USA: Baton Rouge

text: Homo sapiens

text: Paracoccus denitrificans

characteristic: organism

text: cell culture

text: ATCC 19367

text: Microbe sample from Paracoccus denitrificans

text: type strain of Paracoccus denitrificans

characteristic: type-material


Podoviridae NJ-P3

text: Nanjing Agricultural University

characteristic: INSDC secondary accession

text: live

text: Viral

characteristic: NCBI submission package

characteristic: SRA accession

text: China: Nanjing, Jiangsu

characteristic: geo loc name

text: Ralstonia solanacearum

text: Tomato

text: Tomato rhizosphere

text: Caudoviricetes

text: Ralstonia solanacearum QL-RS1115

characteristic: title


Podoviridae NB-P21

text: Nanjing Agricultural University

text: live

text: Viral

characteristic: collection date

text: China: Nanjing, Jiangsu

text: Ralstonia solanacearum

characteristic: host

text: Tomato

characteristic: isolate

text: Tomato rhizosphere

characteristic: isolation source

text: Caudoviricetes


Podoviridae NC-P34

characteristic: External Id

text: Nanjing Agricultural University

characteristic: INSDC center name

text: live

text: Viral

text: China: Nanchang, Jiangxi

text: Ralstonia solanacearum

text: Tomato

text: Tomato rhizosphere

text: Caudoviricetes

text: Viral sample from Podoviridae


Podoviridae NN-P42

text: Nanjing Agricultural University

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Viral

text: China: Nanning, Guangxi

text: Ralstonia solanacearum

text: Tomato

text: Tomato rhizosphere

text: Caudoviricetes

text: Viral sample from Podoviridae


Podoviridae NN-P42-2

text: Nanjing Agricultural University

characteristic: INSDC last update

text: live

text: Viral

text: China: Nanning, Guangxi

text: Ralstonia solanacearum

text: Tomato

text: Tomato rhizosphere

text: Caudoviricetes

characteristic: strain

text: Viral sample from Podoviridae


Podoviridae NB-P21-2

text: Nanjing Agricultural University

text: live

text: Viral

characteristic: NCBI submission model

text: China: Ningbo, Zhejiang

text: Ralstonia solanacearum

text: Tomato

text: Tomato rhizosphere

text: Caudoviricetes

characteristic: organism

text: Viral sample from Podoviridae


text: NIH

text: live

text: Microbe, viral or environmental

text: USA

text: soil

text: Escherichia coli

text: cell culture

text: Microbe sample from Escherichia coli


text: The New Zealand Institute for Plant and Food Research Ltd.

text: live

text: Invertebrate

text: New Zealand: Auckland

text: Acacia sp.

text: 36.85 S 174.77 E

text: Acizzia acaciae

text: Metagenome sample from Acizzia accaciae


text: live

text: Invertebrate

text: New Zealand: Hamilton

text: Eucalyptus sp.

text: 37.80 S 175.27 E

text: Ctenarytaina spatulata

text: Metagenome sample from Ctenarytaina spatulata


text: University of Warsaw, Faculty of Biology, Institute of Microbiology

text: live

text: Microbe, viral or environmental

text: Norway: Spitsbergen

text: Alle alle

text: guano of little auks

text: Psychrobacter sp. DAB_AL62B

text: whole organism

text: Microbe sample from Psychrobacter sp. DAB_AL62B


text: University of New Mexico

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

text: Meliphaga reticulata

text: tissue

characteristic: sample type

characteristic: specimen voucher

text: muscle

characteristic: tissue

text: Model organism or animal sample from Meliphaga reticulata


text: University of New Mexico

text: live

text: Model organism or animal

characteristic: NCBI submission package

characteristic: SRA accession

text: Meliphaga aruensis

text: tissue

text: muscle

text: Model organism or animal sample from Meliphaga aruensis

characteristic: title


text: University of New Mexico

text: live

text: Model organism or animal

text: Meliphaga lewinii

text: tissue

text: muscle

text: Model organism or animal sample from Meliphaga lewinii


text: University of New Mexico

text: live

text: Model organism or animal

text: Oreornis chrysogenys

text: toepad

text: toepad

text: Model organism or animal sample from Oreornis chrysogenys


text: Shantou University

text: live

text: Microbe, viral or environmental

characteristic: collection date

characteristic: environmental sample

text: China: Pearl River estuary

characteristic: geo loc name

characteristic: isolate

text: surface sediment from the estuary of Pearl River

text: 22.7900 N 113.6233 E

characteristic: lat lon

text: freshwater sediment metagenome

characteristic: metagenome source

characteristic: metagenomic assembly

text: This BioSample is a metagenomic assembly obtained from the freshwater sediment metagenome BioSample: SAMN10687025

characteristic: note

text: Acidobacteriota bacterium

text: metagenomic assembly

text: Microbe sample from Acidobacteriota bacterium


characteristic: External Id

text: Shantou University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: China: Pearl River estuary

characteristic: isolation source

text: 22.7900 N 113.6233 E

text: freshwater sediment metagenome

text: Bacteroidota bacterium

text: metagenomic assembly

text: Microbe sample from Bacteroidota bacterium


text: Shantou University

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: China: Pearl River estuary

text: 22.7900 N 113.6233 E

text: freshwater sediment metagenome

text: Campylobacterota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Campylobacterota bacterium


text: Shantou University

text: live

text: Microbe, viral or environmental

characteristic: collection date

characteristic: environmental sample

text: China: Pearl River estuary

text: surface sediment from the estuary of Pearl River treated with pyrene for 1 day

text: 22.7900 N 113.6233 E

text: freshwater sediment metagenome

text: This BioSample is a metagenomic assembly obtained from the freshwater sediment metagenome BioSample: SAMN10687026

text: Bacteroidota bacterium

text: metagenomic assembly

characteristic: title


text: Shantou University

text: live

text: Microbe, viral or environmental

text: China: Pearl River estuary

characteristic: geo loc name

characteristic: isolate

text: 22.7900 N 113.6233 E

characteristic: lat lon

text: freshwater sediment metagenome

text: Paracoccaceae bacterium

text: metagenomic assembly

text: Microbe sample from Paracoccaceae bacterium


text: Shantou University

text: live

text: Microbe, viral or environmental

text: China: Pearl River estuary

text: 22.7900 N 113.6233 E

text: freshwater sediment metagenome

characteristic: metagenome source

characteristic: metagenomic assembly

characteristic: note

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


characteristic: External Id

text: Shantou University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: China: Pearl River estuary

text: surface sediment from the estuary of Pearl River treated with pyrene for 6 days

text: 22.7900 N 113.6233 E

text: freshwater sediment metagenome

text: This BioSample is a metagenomic assembly obtained from the freshwater sediment metagenome BioSample: SAMN10687027

text: Paracoccaceae bacterium

text: metagenomic assembly


text: Shantou University

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: China: Pearl River estuary

text: 22.7900 N 113.6233 E

text: freshwater sediment metagenome

text: Bacteroidota bacterium

text: metagenomic assembly


text: Shantou University

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: China: Pearl River estuary

text: surface sediment from the estuary of Pearl River treated with pyrene for 18 days

characteristic: isolation source

text: 22.7900 N 113.6233 E

text: freshwater sediment metagenome

text: This BioSample is a metagenomic assembly obtained from the freshwater sediment metagenome BioSample: SAMN10687029

text: Bacteroidota bacterium

characteristic: organism

text: metagenomic assembly


text: Shantou University

text: live

text: Microbe, viral or environmental

characteristic: collection date

characteristic: environmental sample

text: China: Pearl River estuary

text: surface sediment from the estuary of Pearl River treated with pyrene for 24 days

text: 22.7900 N 113.6233 E

text: freshwater sediment metagenome

text: This BioSample is a metagenomic assembly obtained from the freshwater sediment metagenome BioSample: SAMN10687030

text: Paracoccaceae bacterium

text: metagenomic assembly

characteristic: sample type


text: Shantou University

text: live

text: Microbe, viral or environmental

text: China: Pearl River estuary

characteristic: geo loc name

characteristic: isolate

text: 22.7900 N 113.6233 E

text: freshwater sediment metagenome

text: Bacteroidota bacterium

text: metagenomic assembly

characteristic: title