name: Bacteroidetes bacterium JPHG164 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: true

text: Japan: Kansai region

text: 36.64 N 135.56 E

text: anaerobic digester metagenome

text: true

text: Bacteroidota bacterium

text: metagenomic assembly


name: Proteobacteria bacterium JPHG171 draft genome from a metagenome of a full-scale anaerobic digester

status: PUBLIC

characteristic: External Id

text: National Institute of Advanced Industrial Science and Technology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

tag: attribute

text: This BioSample is a metagenomic assembly obtained from the anaerobic digester metagenome BioSample: SAMN14524239

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 94.84% with 1.61% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: Japan: Kansai region

characteristic: geo loc name

characteristic: isolate

text: full-scale anaerobic digester treating sewage operated at 41 degrees C

characteristic: isolation source

text: 36.64 N 135.56 E

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

characteristic: metagenomic

text: Pseudomonadota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Pseudomonadota bacterium

characteristic: title


name: Bacteroidetes bacterium JPHG174 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 98.31% with 1.39% contamination.

text: true

text: Japan: Kansai region

text: 36.64 N 135.56 E

text: anaerobic digester metagenome

text: true

text: Bacteroidota bacterium

text: metagenomic assembly

text: Microbe sample from Bacteroidota bacterium


name: Candidatus Cloacimonetes bacterium JPHG177 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 97.8% with 0% contamination.

text: true

text: Japan: Kansai region

text: 36.64 N 135.56 E

text: anaerobic digester metagenome

text: true

text: Candidatus Cloacimonadota bacterium

text: metagenomic assembly

text: Microbe sample from Candidatus Cloacimonadota bacterium


name: Proteobacteria bacterium JPHG178 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 92.26% with 4.09% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: Japan: Kansai region

characteristic: geo loc name

text: 36.64 N 135.56 E

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Crenarchaeota archaeon JPHG182 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 94.93% with 0.7% contamination.

text: true

text: Japan: Kansai region

characteristic: isolate

characteristic: isolation source

text: 36.64 N 135.56 E

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Thermoproteota archaeon

text: metagenomic assembly

text: Microbe sample from Thermoproteota archaeon


name: Bacteroidetes bacterium JPHG188 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 93.55% with 0.32% contamination.

text: true

text: Japan: Kansai region

text: 36.64 N 135.56 E

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Bacteroidota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

characteristic: title


name: Proteobacteria bacterium JPHG189 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 96.13% with 1.94% contamination.

text: true

text: Japan: Kansai region

text: 36.64 N 135.56 E

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Synergistetes bacterium JPHG203 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 94.92% with 0% contamination.

text: true

text: Japan: Kansai region

text: 36.64 N 135.56 E

text: anaerobic digester metagenome

text: true

text: Synergistota bacterium

text: metagenomic assembly

text: Microbe sample from Synergistota bacterium


name: Firmicutes bacterium JPHG208 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 93.52% with 4.84% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: Japan: Kansai region

characteristic: geo loc name

text: 36.64 N 135.56 E

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Firmicutes bacterium JPHG211 draft genome from a metagenome of a full-scale anaerobic digester

text: National Institute of Advanced Industrial Science and Technology

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 98.99% with 2.03% contamination.

text: true

text: Japan: Kansai region

characteristic: isolate

characteristic: isolation source

text: 36.64 N 135.56 E

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Spirochaetes bacterium JPHGx019 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the anaerobic digester metagenome BioSample: SAMN14524239

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 97.69% with 4.49% contamination.

text: true

text: Japan: Kansai region

text: 36.64 N 135.56 E

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Spirochaetota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Spirochaetota bacterium

characteristic: title


name: Firmicutes bacterium JPHGx065 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 96.56% with 0.67% contamination.

text: true

text: Japan: Kansai region

text: full-scale anaerobic digester treating sewage operated at 41 degrees C

text: 36.64 N 135.56 E

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Verrucomicrobia bacterium JPHGx075 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 92.57% with 3.45% contamination.

text: true

text: Japan: Kansai region

text: 36.64 N 135.56 E

text: anaerobic digester metagenome

text: true

text: Verrucomicrobiota bacterium

text: metagenomic assembly

text: Microbe sample from Verrucomicrobiota bacterium


name: Proteobacteria bacterium JPMR014 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the anaerobic digester metagenome BioSample: SAMN14524240

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 84.17% with 0.82% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: Japan: Kanto region

characteristic: geo loc name

text: full-scale anaerobic digester treating sewage operated at 51 degrees C

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly

text: Microbe sample from Pseudomonadota bacterium


name: Bacteroidetes bacterium JPMR020 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 85.15% with 2.39% contamination.

text: true

text: Japan: Kanto region

characteristic: isolate

characteristic: isolation source

text: 36.46 N 139.69 E

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Bacteroidota bacterium

text: metagenomic assembly

text: Microbe sample from Bacteroidota bacterium


name: Verrucomicrobia bacterium JPMR024 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 87.07% with 3.41% contamination.

text: true

text: Japan: Kanto region

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Verrucomicrobiota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

characteristic: title


name: Acidobacteria bacterium JPMR026 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 82.36% with 2.19% contamination.

text: true

text: Japan: Kanto region

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

text: Acidobacteriota bacterium

text: metagenomic assembly

text: Microbe sample from Acidobacteriota bacterium


name: Candidatus Omnitrophica bacterium JPMR031 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

text: National Institute of Advanced Industrial Science and Technology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 100% with 2.81% contamination.

text: true

text: Japan: Kanto region

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

text: Candidatus Omnitrophota bacterium

text: metagenomic assembly

text: Microbe sample from Candidatus Omnitrophota bacterium


name: Armatimonadetes bacterium JPMR032 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 95.1% with 1.14% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: Japan: Kanto region

characteristic: geo loc name

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

text: Armatimonadota bacterium

text: metagenomic assembly

text: Microbe sample from Armatimonadota bacterium


name: Caldiserica bacterium JPMR037 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 100% with 2.2% contamination.

text: true

text: Japan: Kanto region

characteristic: isolate

characteristic: isolation source

text: 36.46 N 139.69 E

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Caldisericota bacterium

text: metagenomic assembly

text: Microbe sample from Caldisericota bacterium


name: Firmicutes bacterium JPMR039 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 89.16% with 3.03% contamination.

text: true

text: Japan: Kanto region

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Bacillota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Bacillota bacterium

characteristic: title


name: Proteobacteria bacterium JPMR046 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: This BioSample is a metagenomic assembly obtained from the anaerobic digester metagenome BioSample: SAMN14524240

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 82.8% with 4.44% contamination.

text: true

text: Japan: Kanto region

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Firmicutes bacterium JPMR048 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 90.36% with 3.26% contamination.

text: true

text: Japan: Kanto region

text: full-scale anaerobic digester treating sewage operated at 51 degrees C

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Firmicutes bacterium JPMR049 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 96.63% with 0.2% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: Japan: Kanto region

characteristic: geo loc name

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Armatimonadetes bacterium JPMR050 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 94.44% with 4.97% contamination.

text: true

text: Japan: Kanto region

characteristic: isolate

characteristic: isolation source

text: 36.46 N 139.69 E

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Armatimonadota bacterium

text: metagenomic assembly


name: Firmicutes bacterium JPMR051 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 99.33% with 0.22% contamination.

text: true

text: Japan: Kanto region

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Bacillota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Bacillota bacterium

characteristic: title


name: Acidobacteria bacterium JPMR053 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 98.25% with 0.88% contamination.

text: true

text: Japan: Kanto region

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

text: Acidobacteriota bacterium

text: metagenomic assembly


name: Bacteroidetes bacterium JPMR057 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 97.85% with 0.81% contamination.

text: true

text: Japan: Kanto region

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

text: Bacteroidota bacterium

text: metagenomic assembly

text: Microbe sample from Bacteroidota bacterium


name: Firmicutes bacterium JPMR058 draft genome from a metagenome of a full-scale anaerobic digester

text: National Institute of Advanced Industrial Science and Technology

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 98.64% with 2.69% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: Japan: Kanto region

characteristic: geo loc name

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Chloroflexi bacterium JPMR060 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 91.42% with 3.52% contamination.

text: true

text: Japan: Kanto region

characteristic: isolate

characteristic: isolation source

text: 36.46 N 139.69 E

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Chloroflexota bacterium

text: metagenomic assembly

text: Microbe sample from Chloroflexota bacterium


name: Proteobacteria bacterium JPMR061 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 96.38% with 2.59% contamination.

text: true

text: Japan: Kanto region

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Pseudomonadota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Pseudomonadota bacterium

characteristic: title


name: Spirochaetes bacterium JPMR072 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 95.2% with 1.33% contamination.

text: true

text: Japan: Kanto region

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

text: Spirochaetota bacterium

text: metagenomic assembly

text: Microbe sample from Spirochaetota bacterium


name: Verrucomicrobia bacterium JPMR073 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the anaerobic digester metagenome BioSample: SAMN14524240

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 100% with 2.81% contamination.

text: true

text: Japan: Kanto region

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

text: Verrucomicrobiota bacterium

text: metagenomic assembly

text: Microbe sample from Verrucomicrobiota bacterium


name: Acidobacteria bacterium JPMR079 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 99.33% with 0.56% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: Japan: Kanto region

characteristic: geo loc name

text: full-scale anaerobic digester treating sewage operated at 51 degrees C

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

text: Acidobacteriota bacterium

text: metagenomic assembly

text: Microbe sample from Acidobacteriota bacterium


name: Firmicutes bacterium JPMR081 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 90.44% with 0.36% contamination.

text: true

text: Japan: Kanto region

characteristic: isolate

characteristic: isolation source

text: 36.46 N 139.69 E

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Bacteroidetes bacterium JPMR084 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 82.79% with 1.34% contamination.

text: true

text: Japan: Kanto region

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Bacteroidota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

characteristic: title


name: Proteobacteria bacterium JPMR088 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 90.65% with 2.58% contamination.

text: true

text: Japan: Kanto region

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Dictyoglomi bacterium JPMR095 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

text: National Institute of Advanced Industrial Science and Technology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 96.09% with 0.67% contamination.

text: true

text: Japan: Kanto region

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

text: Dictyoglomota bacterium

text: metagenomic assembly

text: Microbe sample from Dictyoglomota bacterium


name: Firmicutes bacterium JPMR096 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 95.8% with 0% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: Japan: Kanto region

characteristic: geo loc name

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Firmicutes bacterium JPMR099 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 97.7% with 1.67% contamination.

text: true

text: Japan: Kanto region

characteristic: isolate

characteristic: isolation source

text: 36.46 N 139.69 E

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Spirochaetes bacterium JPMR100 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 97.31% with 0% contamination.

text: true

text: Japan: Kanto region

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Spirochaetota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

characteristic: title


name: Bacteroidetes bacterium JPMR110 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 97.7% with 1.43% contamination.

text: true

text: Japan: Kanto region

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

text: Bacteroidota bacterium

text: metagenomic assembly

text: Microbe sample from Bacteroidota bacterium


name: Proteobacteria bacterium JPMR113 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the anaerobic digester metagenome BioSample: SAMN14524240

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 96.77% with 0% contamination.

text: true

text: Japan: Kanto region

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly

text: Microbe sample from Pseudomonadota bacterium


name: Thermotogae bacterium JPMR117 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 97.65% with 0.63% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: Japan: Kanto region

characteristic: geo loc name

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

text: Thermotogota bacterium

text: metagenomic assembly

text: Microbe sample from Thermotogota bacterium


name: Chloroflexi bacterium JPMR119 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 92.73% with 1.27% contamination.

text: true

text: Japan: Kanto region

characteristic: isolate

text: full-scale anaerobic digester treating sewage operated at 51 degrees C

characteristic: isolation source

text: 36.46 N 139.69 E

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Chloroflexota bacterium

text: metagenomic assembly

text: Microbe sample from Chloroflexota bacterium


name: Proteobacteria bacterium JPMR120 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 98.12% with 4.66% contamination.

text: true

text: Japan: Kanto region

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Pseudomonadota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

characteristic: title


name: Candidatus Elusimicrobia bacterium JPMR121 draft genome from a metagenome of a full-scale anaerobic digester

text: National Institute of Advanced Industrial Science and Technology

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 96.63% with 0.2% contamination.

text: true

text: Japan: Kanto region

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

text: Elusimicrobiota bacterium

text: metagenomic assembly

text: Microbe sample from Elusimicrobiota bacterium


name: Firmicutes bacterium JPMR126 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 96.5% with 0% contamination.

text: true

text: Japan: Kanto region

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Thermotogae bacterium JPMR129 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 96.59% with 2.27% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: Japan: Kanto region

characteristic: geo loc name

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

text: Thermotogota bacterium

text: metagenomic assembly


name: Firmicutes bacterium JPMR130 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 94.64% with 4.83% contamination.

text: true

text: Japan: Kanto region

characteristic: isolate

characteristic: isolation source

text: 36.46 N 139.69 E

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Firmicutes bacterium JPMR132 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 95.76% with 1.98% contamination.

text: true

text: Japan: Kanto region

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Bacillota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Bacillota bacterium

characteristic: title


name: Firmicutes bacterium JPMR134 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 96.09% with 0% contamination.

text: true

text: Japan: Kanto region

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Bacteroidetes bacterium JPMR141 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the anaerobic digester metagenome BioSample: SAMN14524240

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 96.34% with 0.27% contamination.

text: true

text: Japan: Kanto region

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

text: Bacteroidota bacterium

text: metagenomic assembly

text: Microbe sample from Bacteroidota bacterium


name: Spirochaetes bacterium JPMR147 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 95.51% with 1.12% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: Japan: Kanto region

characteristic: geo loc name

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

text: Spirochaetota bacterium

text: metagenomic assembly

text: Microbe sample from Spirochaetota bacterium


name: Firmicutes bacterium JPMR149 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 95.75% with 0.34% contamination.

text: true

text: Japan: Kanto region

characteristic: isolate

characteristic: isolation source

text: 36.46 N 139.69 E

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Firmicutes bacterium JPMR151 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 94.89% with 1.98% contamination.

text: true

text: Japan: Kanto region

text: full-scale anaerobic digester treating sewage operated at 51 degrees C

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Bacillota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Bacillota bacterium

characteristic: title


name: Firmicutes bacterium JPMR154 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 96.37% with 0.81% contamination.

text: true

text: Japan: Kanto region

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Synergistetes bacterium JPMR155 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

text: National Institute of Advanced Industrial Science and Technology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 100% with 3.39% contamination.

text: true

text: Japan: Kanto region

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

text: Synergistota bacterium

text: metagenomic assembly

text: Microbe sample from Synergistota bacterium


name: Caldiserica bacterium JPMR158 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 100% with 1.63% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: Japan: Kanto region

characteristic: geo loc name

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

text: Caldisericota bacterium

text: metagenomic assembly

text: Microbe sample from Caldisericota bacterium


name: Proteobacteria bacterium JPMRx025 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 83.8% with 4.74% contamination.

text: true

text: Japan: Kanto region

characteristic: isolate

characteristic: isolation source

text: 36.46 N 139.69 E

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly

text: Microbe sample from Pseudomonadota bacterium


name: Dictyoglomi bacterium JPMRx031 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 88.09% with 0% contamination.

text: true

text: Japan: Kanto region

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Dictyoglomota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Dictyoglomota bacterium

characteristic: title


name: Bacteroidetes bacterium JPMRx041 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: This BioSample is a metagenomic assembly obtained from the anaerobic digester metagenome BioSample: SAMN14524240

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 91.13% with 3.06% contamination.

text: true

text: Japan: Kanto region

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

text: Bacteroidota bacterium

text: metagenomic assembly


name: Firmicutes bacterium JPMRx055 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 96.69% with 2.82% contamination.

text: true

text: Japan: Kanto region

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Bacteroidetes bacterium JPMRx060 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 98.48% with 0.48% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: Japan: Kanto region

characteristic: geo loc name

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

text: Bacteroidota bacterium

text: metagenomic assembly

text: Microbe sample from Bacteroidota bacterium


name: Firmicutes bacterium JPMRx062 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 96.31% with 2.8% contamination.

text: true

text: Japan: Kanto region

characteristic: isolate

characteristic: isolation source

text: 36.46 N 139.69 E

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Spirochaetes bacterium JPMRx070 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 94.88% with 2.25% contamination.

text: true

text: Japan: Kanto region

text: full-scale anaerobic digester treating sewage operated at 51 degrees C

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Spirochaetota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Spirochaetota bacterium

characteristic: title


name: Proteobacteria bacterium JPMRx091 draft genome from a metagenome of a full-scale anaerobic digester

text: National Institute of Advanced Industrial Science and Technology

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 85.46% with 2.72% contamination.

text: true

text: Japan: Kanto region

text: 36.46 N 139.69 E

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Spirochaetes bacterium JPTR016 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the anaerobic digester metagenome BioSample: SAMN14524241

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 92.99% with 4.56% contamination.

text: true

text: Japan: Kansai region

text: full-scale anaerobic digester treating sewage operated at 42 degrees C

text: 34.64 N 135.56 E

text: anaerobic digester metagenome

text: true

text: Spirochaetota bacterium

text: metagenomic assembly


name: Bacteroidetes bacterium JPTR017 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 99.46% with 3.43% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: Japan: Kansai region

characteristic: geo loc name

text: 34.64 N 135.56 E

text: anaerobic digester metagenome

text: true

text: Bacteroidota bacterium

text: metagenomic assembly


name: Bacteroidetes bacterium JPTR022 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 97.39% with 0.65% contamination.

text: true

text: Japan: Kansai region

characteristic: isolate

characteristic: isolation source

text: 34.64 N 135.56 E

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Bacteroidota bacterium

text: metagenomic assembly


name: Bacteroidetes bacterium JPTR028 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 93.33% with 2.14% contamination.

text: true

text: Japan: Kansai region

text: 34.64 N 135.56 E

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Bacteroidota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

characteristic: title


name: Thermotogae bacterium JPTR030 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 99.84% with 0.47% contamination.

text: true

text: Japan: Kansai region

text: 34.64 N 135.56 E

text: anaerobic digester metagenome

text: true

text: Thermotogota bacterium

text: metagenomic assembly

text: Microbe sample from Thermotogota bacterium


name: Firmicutes bacterium JPTR034 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 91.18% with 2.52% contamination.

text: true

text: Japan: Kansai region

text: 34.64 N 135.56 E

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Bacteroidetes bacterium JPTR035 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 91.18% with 3.59% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: Japan: Kansai region

characteristic: geo loc name

text: 34.64 N 135.56 E

text: anaerobic digester metagenome

text: true

text: Bacteroidota bacterium

text: metagenomic assembly


name: Candidatus Cloacimonetes bacterium JPTR038 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 95.54% with 1.1% contamination.

text: true

text: Japan: Kansai region

characteristic: isolate

characteristic: isolation source

text: 34.64 N 135.56 E

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Candidatus Cloacimonadota bacterium

text: metagenomic assembly

text: Microbe sample from Candidatus Cloacimonadota bacterium


name: Proteobacteria bacterium JPTR051 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 97.71% with 0.03% contamination.

text: true

text: Japan: Kansai region

text: 34.64 N 135.56 E

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Pseudomonadota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Pseudomonadota bacterium

characteristic: title


name: Firmicutes bacterium JPTRx015 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 99.33% with 0% contamination.

text: true

text: Japan: Kansai region

text: 34.64 N 135.56 E

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Proteobacteria bacterium JPTRx022 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

text: National Institute of Advanced Industrial Science and Technology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 96.11% with 2.9% contamination.

text: true

text: Japan: Kansai region

text: 34.64 N 135.56 E

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Bacteroidetes bacterium JPTRx025 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the anaerobic digester metagenome BioSample: SAMN14524241

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 85.3% with 2.09% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: Japan: Kansai region

characteristic: geo loc name

text: 34.64 N 135.56 E

text: anaerobic digester metagenome

text: true

text: Bacteroidota bacterium

text: metagenomic assembly

text: Microbe sample from Bacteroidota bacterium


name: Acidobacteria bacterium JPTRx035 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 91.73% with 1.07% contamination.

text: true

text: Japan: Kansai region

characteristic: isolate

text: full-scale anaerobic digester treating sewage operated at 42 degrees C

characteristic: isolation source

text: 34.64 N 135.56 E

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Acidobacteriota bacterium

text: metagenomic assembly

text: Microbe sample from Acidobacteriota bacterium


name: Firmicutes bacterium JPTRx050 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 91.18% with 2.29% contamination.

text: true

text: Japan: Kansai region

text: 34.64 N 135.56 E

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Bacillota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Bacillota bacterium

characteristic: title


name: Verrucomicrobia bacterium JPTRx062 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 87.5% with 2.7% contamination.

text: true

text: Japan: Kansai region

text: 34.64 N 135.56 E

text: anaerobic digester metagenome

text: true

text: Verrucomicrobiota bacterium

text: metagenomic assembly

text: Microbe sample from Verrucomicrobiota bacterium


name: Chloroflexi bacterium JPTRx063 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 80.82% with 2.36% contamination.

text: true

text: Japan: Kansai region

text: 34.64 N 135.56 E

text: anaerobic digester metagenome

text: true

text: Chloroflexota bacterium

text: metagenomic assembly

text: Microbe sample from Chloroflexota bacterium


name: Firmicutes bacterium JPTRx065 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 95.1% with 0.87% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: Japan: Kansai region

characteristic: geo loc name

text: 34.64 N 135.56 E

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Bacteroidetes bacterium JPTRx084 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 99.05% with 0.48% contamination.

text: true

text: Japan: Kansai region

characteristic: isolate

characteristic: isolation source

text: 34.64 N 135.56 E

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Bacteroidota bacterium

text: metagenomic assembly


name: Verrucomicrobia bacterium JPTRx087 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 93.92% with 4.77% contamination.

text: true

text: Japan: Kansai region

text: 34.64 N 135.56 E

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Verrucomicrobiota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

characteristic: title


name: Firmicutes bacterium JPTRx095 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 95.08% with 1.01% contamination.

text: true

text: Japan: Kansai region

text: 34.64 N 135.56 E

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Bacteroidetes bacterium JPTRx101 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

text: National Institute of Advanced Industrial Science and Technology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 94.78% with 0.56% contamination.

text: true

text: Japan: Kansai region

text: 34.64 N 135.56 E

text: anaerobic digester metagenome

text: true

text: Bacteroidota bacterium

text: metagenomic assembly


name: Acidobacteria bacterium JPTRx106 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the anaerobic digester metagenome BioSample: SAMN14524241

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 95.73% with 2.61% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: Japan: Kansai region

characteristic: geo loc name

text: 34.64 N 135.56 E

text: anaerobic digester metagenome

text: true

text: Acidobacteriota bacterium

text: metagenomic assembly


name: Firmicutes bacterium JPTRx112 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 91.26% with 0% contamination.

text: true

text: Japan: Kansai region

characteristic: isolate

characteristic: isolation source

text: 34.64 N 135.56 E

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Proteobacteria bacterium USCA025 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the anaerobic digester metagenome BioSample: SAMN14524242

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 84.19% with 2.84% contamination.

text: true

text: USA: Carson, California

text: full-scale anaerobic digester treating sewage operated at 35 degrees C

text: 33.83 N 118.28 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Pseudomonadota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Pseudomonadota bacterium

characteristic: title


name: Proteobacteria bacterium USCA027 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 98.06% with 1.29% contamination.

text: true

text: USA: Carson, California

text: 33.83 N 118.28 W

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Candidatus Omnitrophica bacterium USCA035 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 96.07% with 2.81% contamination.

text: true

text: USA: Carson, California

text: 33.83 N 118.28 W

text: anaerobic digester metagenome

text: true

text: Candidatus Omnitrophota bacterium

text: metagenomic assembly

text: Microbe sample from Candidatus Omnitrophota bacterium


name: Bacteroidetes bacterium USCA038 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 88.1% with 2.86% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Carson, California

characteristic: geo loc name

text: 33.83 N 118.28 W

text: anaerobic digester metagenome

text: true

text: Bacteroidota bacterium

text: metagenomic assembly

text: Microbe sample from Bacteroidota bacterium


name: Acidobacteria bacterium USCA059 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 97.86% with 3.42% contamination.

text: true

text: USA: Carson, California

characteristic: isolate

characteristic: isolation source

text: 33.83 N 118.28 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Acidobacteriota bacterium

text: metagenomic assembly

text: Microbe sample from Acidobacteriota bacterium


name: Proteobacteria bacterium USCA084 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 93.94% with 1.33% contamination.

text: true

text: USA: Carson, California

text: 33.83 N 118.28 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Pseudomonadota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

characteristic: title


name: Bacteroidetes bacterium USCA096 draft genome from a metagenome of a full-scale anaerobic digester

text: National Institute of Advanced Industrial Science and Technology

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 81.57% with 3.91% contamination.

text: true

text: USA: Carson, California

text: 33.83 N 118.28 W

text: anaerobic digester metagenome

text: true

text: Bacteroidota bacterium

text: metagenomic assembly


name: Bacteroidetes bacterium USCA100 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 81.9% with 3.67% contamination.

text: true

text: USA: Carson, California

text: 33.83 N 118.28 W

text: anaerobic digester metagenome

text: true

text: Bacteroidota bacterium

text: metagenomic assembly


name: Proteobacteria bacterium USCA105 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 96.75% with 3.94% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Carson, California

characteristic: geo loc name

text: 33.83 N 118.28 W

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Spirochaetes bacterium USCA106 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 93.79% with 4.49% contamination.

text: true

text: USA: Carson, California

characteristic: isolate

characteristic: isolation source

text: 33.83 N 118.28 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Spirochaetota bacterium

text: metagenomic assembly

text: Microbe sample from Spirochaetota bacterium


name: Proteobacteria bacterium USCA108 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the anaerobic digester metagenome BioSample: SAMN14524242

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 99.57% with 1.23% contamination.

text: true

text: USA: Carson, California

text: 33.83 N 118.28 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Pseudomonadota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

characteristic: title


name: Proteobacteria bacterium USCA110 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 96.13% with 1.94% contamination.

text: true

text: USA: Carson, California

text: full-scale anaerobic digester treating sewage operated at 35 degrees C

text: 33.83 N 118.28 W

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly

text: Microbe sample from Pseudomonadota bacterium


name: Verrucomicrobia bacterium USCA112 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 92.74% with 2.73% contamination.

text: true

text: USA: Carson, California

text: 33.83 N 118.28 W

text: anaerobic digester metagenome

text: true

text: Verrucomicrobiota bacterium

text: metagenomic assembly

text: Microbe sample from Verrucomicrobiota bacterium


name: Spirochaetes bacterium USCA115 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 84.66% with 4.49% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Carson, California

characteristic: geo loc name

text: 33.83 N 118.28 W

text: anaerobic digester metagenome

text: true

text: Spirochaetota bacterium

text: metagenomic assembly


name: Thermotogae bacterium USCA118 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 98.98% with 0.78% contamination.

text: true

text: USA: Carson, California

characteristic: isolate

characteristic: isolation source

text: 33.83 N 118.28 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Thermotogota bacterium

text: metagenomic assembly

text: Microbe sample from Thermotogota bacterium


name: Bacteroidetes bacterium USCA130 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 95.43% with 0.54% contamination.

text: true

text: USA: Carson, California

text: 33.83 N 118.28 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Bacteroidota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Bacteroidota bacterium

characteristic: title


name: Acidobacteria bacterium USCA132 draft genome from a metagenome of a full-scale anaerobic digester

text: National Institute of Advanced Industrial Science and Technology

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 95.73% with 0.85% contamination.

text: true

text: USA: Carson, California

text: 33.83 N 118.28 W

text: anaerobic digester metagenome

text: true

text: Acidobacteriota bacterium

text: metagenomic assembly

text: Microbe sample from Acidobacteriota bacterium


name: Proteobacteria bacterium USCA135 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 94.84% with 4.52% contamination.

text: true

text: USA: Carson, California

text: 33.83 N 118.28 W

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Spirochaetes bacterium USCA137 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 94.42% with 3.8% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Carson, California

characteristic: geo loc name

text: 33.83 N 118.28 W

text: anaerobic digester metagenome

text: true

text: Spirochaetota bacterium

text: metagenomic assembly

text: Microbe sample from Spirochaetota bacterium


name: Proteobacteria bacterium USCA144 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the anaerobic digester metagenome BioSample: SAMN14524242

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 94.66% with 4.27% contamination.

text: true

text: USA: Carson, California

characteristic: isolate

characteristic: isolation source

text: 33.83 N 118.28 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Proteobacteria bacterium USCA149 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 82.76% with 0% contamination.

text: true

text: USA: Carson, California

text: full-scale anaerobic digester treating sewage operated at 35 degrees C

text: 33.83 N 118.28 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Pseudomonadota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

characteristic: title


name: Proteobacteria bacterium USCA156 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 99.57% with 0% contamination.

text: true

text: USA: Carson, California

text: 33.83 N 118.28 W

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly

text: Microbe sample from Pseudomonadota bacterium


name: Bacteroidetes bacterium USCA157 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 94.25% with 0.56% contamination.

text: true

text: USA: Carson, California

text: 33.83 N 118.28 W

text: anaerobic digester metagenome

text: true

text: Bacteroidota bacterium

text: metagenomic assembly


name: Acidobacteria bacterium USCA195 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 90.17% with 4.47% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Carson, California

characteristic: geo loc name

text: 33.83 N 118.28 W

text: anaerobic digester metagenome

text: true

text: Acidobacteriota bacterium

text: metagenomic assembly


name: Synergistetes bacterium USCA203 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 94.61% with 2.7% contamination.

text: true

text: USA: Carson, California

characteristic: isolate

characteristic: isolation source

text: 33.83 N 118.28 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Synergistota bacterium

text: metagenomic assembly

text: Microbe sample from Synergistota bacterium


name: Firmicutes bacterium USCA262 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 96.1% with 1.79% contamination.

text: true

text: USA: Carson, California

text: 33.83 N 118.28 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Bacillota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Bacillota bacterium

characteristic: title


name: Bacteroidetes bacterium USCAx002 draft genome from a metagenome of a full-scale anaerobic digester

text: National Institute of Advanced Industrial Science and Technology

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 88.76% with 3.96% contamination.

text: true

text: USA: Carson, California

text: 33.83 N 118.28 W

text: anaerobic digester metagenome

text: true

text: Bacteroidota bacterium

text: metagenomic assembly

text: Microbe sample from Bacteroidota bacterium


name: Firmicutes bacterium USCAx041 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 96.45% with 1.05% contamination.

text: true

text: USA: Carson, California

text: 33.83 N 118.28 W

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Firmicutes bacterium USCAx079 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 83.01% with 2.98% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Carson, California

characteristic: geo loc name

text: 33.83 N 118.28 W

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Proteobacteria bacterium USCAx093 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 81.38% with 0% contamination.

text: true

text: USA: Carson, California

characteristic: isolate

characteristic: isolation source

text: 33.83 N 118.28 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Candidatus Omnitrophica bacterium USCAx096 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the anaerobic digester metagenome BioSample: SAMN14524242

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 89.43% with 4.22% contamination.

text: true

text: USA: Carson, California

text: 33.83 N 118.28 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Candidatus Omnitrophota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Candidatus Omnitrophota bacterium

characteristic: title


name: Acidobacteria bacterium USCAx141 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 97.86% with 3.42% contamination.

text: true

text: USA: Carson, California

text: full-scale anaerobic digester treating sewage operated at 35 degrees C

text: 33.83 N 118.28 W

text: anaerobic digester metagenome

text: true

text: Acidobacteriota bacterium

text: metagenomic assembly

text: Microbe sample from Acidobacteriota bacterium


name: Proteobacteria bacterium USCAx156 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 94.84% with 2.93% contamination.

text: true

text: USA: Carson, California

text: 33.83 N 118.28 W

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly

text: Microbe sample from Pseudomonadota bacterium


name: Proteobacteria bacterium USDE022 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the anaerobic digester metagenome BioSample: SAMN14524243

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 93.64% with 1.09% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Decatur, Illinois

characteristic: geo loc name

text: 39.84 N 88.95 W

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Proteobacteria bacterium USDE024 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 88.07% with 4.95% contamination.

text: true

text: USA: Decatur, Illinois

characteristic: isolate

characteristic: isolation source

text: 39.84 N 88.95 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Verrucomicrobia bacterium USDE036 draft genome from a metagenome of a full-scale anaerobic digester

text: National Institute of Advanced Industrial Science and Technology

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 100% with 4.05% contamination.

text: true

text: USA: Decatur, Illinois

text: 39.84 N 88.95 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Verrucomicrobiota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Verrucomicrobiota bacterium

characteristic: title


name: Chloroflexi bacterium USDE054 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 90.63% with 3.94% contamination.

text: true

text: USA: Decatur, Illinois

text: 39.84 N 88.95 W

text: anaerobic digester metagenome

text: true

text: Chloroflexota bacterium

text: metagenomic assembly

text: Microbe sample from Chloroflexota bacterium


name: Proteobacteria bacterium USDE057 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 85.96% with 4.38% contamination.

text: true

text: USA: Decatur, Illinois

text: 39.84 N 88.95 W

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Bacteroidetes bacterium USDE070 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 98.77% with 3.45% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Decatur, Illinois

characteristic: geo loc name

text: 39.84 N 88.95 W

text: anaerobic digester metagenome

text: true

text: Bacteroidota bacterium

text: metagenomic assembly

text: Microbe sample from Bacteroidota bacterium


name: Bacteroidetes bacterium USDE075 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 98.14% with 1.24% contamination.

text: true

text: USA: Decatur, Illinois

characteristic: isolate

characteristic: isolation source

text: 39.84 N 88.95 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Bacteroidota bacterium

text: metagenomic assembly


name: Chloroflexi bacterium USDE087 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 86.82% with 2% contamination.

text: true

text: USA: Decatur, Illinois

text: 39.84 N 88.95 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Chloroflexota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

characteristic: title


name: Chloroflexi bacterium USDE092 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 83.54% with 4.55% contamination.

text: true

text: USA: Decatur, Illinois

text: full-scale anaerobic digester treating sewage operated at 35 degrees C

text: 39.84 N 88.95 W

text: anaerobic digester metagenome

text: true

text: Chloroflexota bacterium

text: metagenomic assembly


name: Chloroflexi bacterium USDE095 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 95.45% with 1.09% contamination.

text: true

text: USA: Decatur, Illinois

text: 39.84 N 88.95 W

text: anaerobic digester metagenome

text: true

text: Chloroflexota bacterium

text: metagenomic assembly


name: Chloroflexi bacterium USDE096 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 87.88% with 2.3% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Decatur, Illinois

characteristic: geo loc name

text: 39.84 N 88.95 W

text: anaerobic digester metagenome

text: true

text: Chloroflexota bacterium

text: metagenomic assembly