text: BioCI

text: live

text: Plant

text: S. Frangos

characteristic: collected by

characteristic: collection date

text: immature tree

characteristic: dev stage

text: USA:New York, New York Botanical Garden

characteristic: isolate

text: Wollemia nobilis

text: leaves

text: Plant sample from Wollemia nobilis


status: PUBLIC

characteristic: External Id

text: University of Fribourg

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Plant

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: adult

tag: attribute

characteristic: ecotype

text: Brazil

characteristic: geo loc name

text: Stigmatodon vellozicola

characteristic: organism

text: tissue sample

characteristic: sample type

text: T.M. Machado et al. 501 (BHCB)

characteristic: specimen voucher

text: leaves

characteristic: tissue

text: Vriesea vellozicola - TM501 - Brazil

characteristic: title


text: Dept. Microbiology and Molecular Medicine, University of Geneva, Faculty of Medicine / CMU

text: live

text: Generic

characteristic: background strain

text: Wild type

characteristic: genotype

text: Caulobacter vibrioides

text: negative control

text: Negative_control_Caulobacter_crescentus_NA1000(WT)(GHA-354)


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: delta_mipZ PvanA::PvanA-mipZ PxylX::PxylX-mipZK13A-eyfp

text: Caulobacter vibrioides

text: ChIP-Seq_MipZK13A-eYFP_Caulobacter_crescentus_BH100(GHA-353)


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: delta_mipZ PvanA::PvanA-mipZ PxylX::PxylX-mipZ-eyfp

text: Caulobacter vibrioides

text: MipZWT-eYFP

text: ChIP-Seq_MipZWT-eYFP_Caulobacter_crescentus_BH64(GHA-352)


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: delta_mipZ PvanA::PvanA-mipZ PxylX::PxylX-mipZD42A-eyfp

text: Caulobacter vibrioides

text: ChIP-Seq_MipZD42A-eYFP_Caulobacter_crescentus_BH99(GHA-350)


text: University of Freiburg

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: biological replicates number

text: Danio rerio

text: whole zebrafish embryos

characteristic: stage

text: whole embryo

text: MZsox19b rep2_5hpf


text: University of Freiburg

text: live

text: Generic

characteristic: SRA accession

text: MZspg

text: Danio rerio

characteristic: organism

text: whole zebrafish embryos

text: whole embryo

text: MZspg rep2_3hpf


text: University of Freiburg

text: live

text: Generic

text: MZspg

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZspg rep2_2.5hpf


text: University of Freiburg

text: live

text: Generic

text: MZspg

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZspg rep1_6hpf


text: University of Freiburg

text: live

text: Generic

text: MZspg

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZspg rep1_5.5hpf


text: University of Freiburg

text: live

text: Generic

text: MZspg

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZspg rep1_5hpf


text: University of Freiburg

text: live

text: Generic

text: MZspg

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZspg rep1_4.5hpf


text: University of Freiburg

text: live

text: Generic

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZsox19b rep2_4.5hpf


text: University of Freiburg

text: live

text: Generic

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZsox19b rep2_4hpf


text: University of Freiburg

text: live

text: Generic

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZsox19b rep2_3.5hpf


text: University of Freiburg

text: live

text: Generic

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZsox19b rep2_3hpf


text: University of Freiburg

text: live

text: Generic

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZsox19b rep2_2.5hpf


text: University of Freiburg

text: live

text: Generic

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZsox19b rep1_6hpf


text: University of Freiburg

text: live

text: Generic

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZsox19b rep1_5.5hpf


text: University of Freiburg

text: live

text: Generic

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZsox19b rep1_5hpf


text: University of Freiburg

text: live

text: Generic

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZsox19b rep1_4.5hpf


text: University of Freiburg

text: live

text: Generic

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZsox19b rep1_4hpf


text: University of Freiburg

text: live

text: Generic

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZsox19b rep1_3.5hpf


text: University of Freiburg

text: live

text: Generic

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZsox19b rep1_3hpf


text: University of Freiburg

text: live

text: Generic

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZsox19b rep1_2.5hpf


text: University of Freiburg

text: live

text: Generic

text: wild-type

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: WT rep4_6hpf


text: University of Freiburg

text: live

text: Generic

text: MZspg

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZspg rep1_4hpf


text: University of Freiburg

text: live

text: Generic

text: MZspg

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZspg rep1_3.5hpf


text: University of Freiburg

text: live

text: Generic

text: MZspg

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZspg rep1_3hpf


text: University of Freiburg

text: live

text: Generic

text: MZspg

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZspg rep1_2.5hpf


text: University of Freiburg

text: live

text: Generic

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZsox19b rep2_6hpf


text: University of Freiburg

text: live

text: Generic

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZsox19b rep2_5.5hpf


text: University of Freiburg

text: live

text: Generic

text: wild-type

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: WT rep1_3hpf


text: University of Freiburg

text: live

text: Generic

text: wild-type

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: WT rep1_2.5hpf


text: University of Freiburg

text: live

text: Generic

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZsox19bspg rep2_6hpf


text: University of Freiburg

text: live

text: Generic

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZsox19bspg rep2_5.5hpf


text: University of Freiburg

text: live

text: Generic

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZsox19bspg rep2_5hpf


text: University of Freiburg

text: live

text: Generic

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZsox19bspg rep2_4.5hpf


text: University of Freiburg

text: live

text: Generic

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZsox19bspg rep2_4hpf


text: University of Freiburg

text: live

text: Generic

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZsox19bspg rep2_3.5hpf


text: University of Freiburg

text: live

text: Generic

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZsox19bspg rep2_3hpf


text: University of Freiburg

text: live

text: Generic

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZsox19bspg rep2_2.5hpf


text: University of Freiburg

text: live

text: Generic

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZsox19bspg rep1_5.5hpf


text: University of Freiburg

text: live

text: Generic

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZsox19bspg rep1_5hpf


text: University of Freiburg

text: live

text: Generic

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZsox19bspg rep1_4.5hpf


text: University of Freiburg

text: live

text: Generic

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZsox19bspg rep1_4hpf


text: University of Freiburg

text: live

text: Generic

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZsox19bspg rep1_3.5hpf


text: University of Freiburg

text: live

text: Generic

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZsox19bspg rep1_3hpf


text: University of Freiburg

text: live

text: Generic

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZsox19bspg rep1_2.5hpf


text: University of Freiburg

text: live

text: Generic

text: MZspg

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZspg rep2_6hpf


text: University of Freiburg

text: live

text: Generic

text: MZspg

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZspg rep2_5.5hpf


text: University of Freiburg

text: live

text: Generic

text: MZspg

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZspg rep2_5hpf


text: University of Freiburg

text: live

text: Generic

text: MZspg

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZspg rep2_4.5hpf


text: University of Freiburg

text: live

text: Generic

text: MZspg

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZspg rep2_4hpf


text: University of Freiburg

text: live

text: Generic

text: MZspg

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: MZspg rep2_3.5hpf


text: University of Freiburg

text: live

text: Generic

text: wild-type

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: WT rep4_5hpf


text: University of Freiburg

text: live

text: Generic

text: wild-type

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: WT rep4_4.5hpf


text: University of Freiburg

text: live

text: Generic

text: wild-type

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: WT rep4_4hpf


text: University of Freiburg

text: live

text: Generic

text: wild-type

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: WT rep4_3.5hpf


text: University of Freiburg

text: live

text: Generic

text: wild-type

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: WT rep4_3hpf


text: University of Freiburg

text: live

text: Generic

text: wild-type

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: WT rep4_2.5hpf


text: University of Freiburg

text: live

text: Generic

text: wild-type

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: WT rep3_6hpf


text: University of Freiburg

text: live

text: Generic

text: wild-type

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: WT rep3_5.5hpf


text: University of Freiburg

text: live

text: Generic

text: wild-type

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: WT rep3_5hpf


text: University of Freiburg

text: live

text: Generic

text: wild-type

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: WT rep3_4.5hpf


text: University of Freiburg

text: live

text: Generic

text: wild-type

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: WT rep3_4hpf


text: University of Freiburg

text: live

text: Generic

text: wild-type

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: WT rep3_3.5hpf


text: University of Freiburg

text: live

text: Generic

text: wild-type

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: WT rep3_3hpf


text: University of Freiburg

text: live

text: Generic

text: wild-type

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: WT rep3_2.5hpf


text: University of Freiburg

text: live

text: Generic

text: wild-type

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: WT rep2_6hpf


text: University of Freiburg

text: live

text: Generic

text: wild-type

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: WT rep2_5.5hpf


text: University of Freiburg

text: live

text: Generic

text: wild-type

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: WT rep2_5hpf


text: University of Freiburg

text: live

text: Generic

text: wild-type

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: WT rep2_4.5hpf


text: University of Freiburg

text: live

text: Generic

text: wild-type

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: WT rep2_4hpf


text: University of Freiburg

text: live

text: Generic

text: wild-type

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: WT rep2_3.5hpf


text: University of Freiburg

text: live

text: Generic

text: wild-type

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: WT rep2_3hpf


text: University of Freiburg

text: live

text: Generic

text: wild-type

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: WT rep2_2.5hpf


text: University of Freiburg

text: live

text: Generic

text: wild-type

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: WT rep1_5.5hpf


text: University of Freiburg

text: live

text: Generic

text: wild-type

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: WT rep1_5hpf


text: University of Freiburg

text: live

text: Generic

text: wild-type

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: WT rep1_4.5hpf


text: University of Freiburg

text: live

text: Generic

text: wild-type

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: WT rep1_4hpf


text: University of Freiburg

text: live

text: Generic

text: wild-type

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: WT rep1_3.5hpf


text: University of Freiburg

text: live

text: Generic

text: wild-type

text: Danio rerio

text: whole zebrafish embryos

text: whole embryo

text: WT rep4_5.5hpf


text: Limnological Institute Siberian Branch of the Russian Academy of Sciences

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: Russia: Lake Baikal

characteristic: geo loc name

text: Lubomirskia baikalensis

characteristic: host

text: Janthinobacterium lividum

text: cell culture

characteristic: sample type

characteristic: strain

text: Microbe sample from Janthinobacterium lividum


characteristic: External Id

text: University of Auckland

text: live

text: MIMAG.microbial

text: This BioSample is a metagenomic assembly obtained from the biofilm metagenome BioSample: SAMN12500548, SAMN12500549, SAMN12500550, SAMN12500551 and SAMN12500552

characteristic: derived-from

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: description

text: New Zealand

text: Wai-iti river, Nelson

characteristic: environmental sample

text: New Zealand: Wai-iti river, Nelson

characteristic: isolate

text: freshwater Microcoleus biofilm

characteristic: isolation source

text: biofilm metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Bacteroidota bacterium

text: metagenomic assembly

characteristic: sample-type

characteristic: title


text: University of Auckland

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIMAG.microbial

characteristic: NCBI submission model

characteristic: NCBI submission package

text: This BioSample is a metagenomic assembly obtained from the biofilm metagenome BioSample: SAMN12500551

text: Keywords: GSC:MIxS;MIMAG:6.0

text: New Zealand

text: Wai-iti river, Nelson

text: New Zealand: Wai-iti river, Nelson

text: freshwater Microcoleus biofilm

text: biofilm metagenome

text: Bacteroidota bacterium

text: metagenomic assembly


Bacillus sp. BNPI-92

text: KIIT University

text: live

text: Microbe, viral or environmental

text: Seid Mohammed

characteristic: collected by

characteristic: collection date

text: India: Bhubaneswar

characteristic: geo loc name

text: Seid Mohammed

characteristic: identified by

text: Plastic waste

text: Bacillus sp. BNPI-92

characteristic: organism

text: whole organism

characteristic: sample type

characteristic: strain

text: Genome of Bacillus sp. BNPI-2


name: Nitrospinae sp. GoM_MAG_304A from continental shelf sea water microbial communities in the Gulf of Mexico, USA

characteristic: External Id

text: Georgia Institute of Technology

text: live

text: Microbe, viral or environmental

text: 16.4 m

characteristic: depth

text: This biosample is a metagenomic assembly obtained from the marine metagenome BioSample: SAMN10227778

characteristic: derived-from

text: sea water

characteristic: env biome

characteristic: environmental sample

text: USA: Gulf of Mexico

characteristic: isolate

characteristic: isolation source

text: 29.290 N 92.800 W

characteristic: lat lon

text: marine metagenome

characteristic: metagenome source

text: Nitrospinota bacterium

text: 1000 ml

text: metagenomic assembly

text: Microbe sample from Nitrospinota bacterium


name: Nitrospinae sp. GoM_MAG_32A from continental shelf sea water microbial communities in the Gulf of Mexico, USA

text: Georgia Institute of Technology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 18.0 m

text: This biosample is a metagenomic assembly obtained from the marine metagenome BioSample: SAMN10227781

text: sea water

text: USA: Gulf of Mexico

text: 28.868 N 90.728 W

text: marine metagenome

characteristic: metagenomic

text: Nitrospinota bacterium

text: 1000 ml

text: metagenomic assembly

characteristic: title


name: Nitrospinae sp. GoM_MAG_76A from continental shelf sea water microbial communities in the Gulf of Mexico, USA

characteristic: External Id

text: Georgia Institute of Technology

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: 14.0 m

text: This biosample is a metagenomic assembly obtained from the marine metagenome BioSample: SAMN10227780

text: sea water

text: USA: Gulf of Mexico

characteristic: geo loc name

text: 28.798 N 92.331 W

text: marine metagenome

text: Nitrospinota bacterium

characteristic: organism

text: 1000 ml

text: metagenomic assembly

characteristic: sample type


name: Nitrospinae sp. GoM_MAG_55B from continental shelf sea water microbial communities in the Gulf of Mexico, USA

text: Georgia Institute of Technology

text: live

text: Microbe, viral or environmental

text: 14.0 m

characteristic: depth

characteristic: derived-from

text: sea water

characteristic: env biome

characteristic: environmental sample

text: USA: Gulf of Mexico

characteristic: isolate

text: 28.798 N 92.331 W

text: marine metagenome

text: Nitrospinota bacterium

text: 1000 ml

text: metagenomic assembly


name: Nitrospinae sp. GoM_MAG_90B from continental shelf sea water microbial communities in the Gulf of Mexico, USA

text: Georgia Institute of Technology

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: 16.4 m

text: sea water

text: USA: Gulf of Mexico

characteristic: isolation source

text: 29.290 N 92.800 W

characteristic: lat lon

text: marine metagenome

characteristic: metagenome source

text: Nitrospinota bacterium

text: 1000 ml

text: metagenomic assembly


name: Nitrospinae sp. GoM_MAG_111B from continental shelf sea water microbial communities in the Gulf of Mexico, USA

text: Georgia Institute of Technology

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 18.0 m

text: sea water

text: USA: Gulf of Mexico

text: 28.868 N 90.728 W

text: marine metagenome

characteristic: metagenomic

text: Nitrospinota bacterium

text: 1000 ml

text: metagenomic assembly


name: Nitrospinae sp. GoM_MAG_36C from continental shelf sea water microbial communities in the Gulf of Mexico, USA

characteristic: External Id

text: Georgia Institute of Technology

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: 14.0 m

text: sea water

text: USA: Gulf of Mexico

characteristic: geo loc name

text: 28.798 N 92.331 W

text: marine metagenome

text: Nitrospinota bacterium

characteristic: organism

text: 1000 ml

text: metagenomic assembly

characteristic: title


text: Infectious Disease, Imperial College London

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: Mycobacterium tuberculosis

text: Sputum from TB patients

characteristic: sample type

text: Human sputum


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Grown to stationary phase

characteristic: growth protocol

text: Mycobacterium tuberculosis H37Rv

text: laboratory culture

text: M. tuberculosis H37Rv strain

characteristic: strain

text: type strain of Mycobacterium tuberculosis

characteristic: type material


characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: Grown to exponential phase

text: Mycobacterium tuberculosis H37Rv

text: laboratory culture

text: M. tuberculosis H37Rv strain


name: Draft genome sequence of Lactococcus garvieae subsp. Garvieae CCUG 32208T

text: University of Gothenburg - CCUG

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: culture collection

text: Mastitis

characteristic: isolation source

text: Lactococcus garvieae subsp. garvieae

text: Cell culture

text: CCUG 32208T

text: garvieae

characteristic: sub species

text: Microbe sample from Lactococcus garvieae subsp. garvieae

text: type strain of Streptococcus garvieae

characteristic: type-material


characteristic: External Id

text: The Second Military Medical University

text: live

text: Pathogen.cl

text: Novogene

characteristic: collected by

characteristic: collection date

text: China:Shanghai

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: cryptococcal meningitis

characteristic: host disease

text: RLF

characteristic: isolate

text: self-constructed strain based on H99

text: not collected

characteristic: lat lon

characteristic: organism

text: replicate=biological replicate 1

characteristic: replicate

text: Cryptococcus Neoformans

text: Pathogen: clinical or host-associated sample from Cryptococcus sp. (in: basidiomycete fungi)

characteristic: title


text: The Second Military Medical University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: SRA accession

text: Novogene

text: China:Shanghai

text: Homo sapiens

text: cryptococcal meningitis

text: RLF

text: self-constructed strain based on H99

text: not collected

text: Cryptococcus sp. (in: basidiomycete fungi)

text: replicate=biological replicate 2

text: Cryptococcus Neoformans

characteristic: strain


characteristic: External Id

text: The Second Military Medical University

text: live

text: Pathogen.cl

characteristic: NCBI submission package

text: Novogene

characteristic: collected by

characteristic: collection date

text: China:Shanghai

text: Homo sapiens

text: cryptococcal meningitis

text: RLF

text: self-constructed strain based on H99

characteristic: isolation source

text: not collected

text: replicate=biological replicate 3

text: Cryptococcus Neoformans


text: The Second Military Medical University

text: live

text: Pathogen.cl

text: Novogene

text: China:Shanghai

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: cryptococcal meningitis

characteristic: host disease

characteristic: isolate

text: ATCC

text: not collected

characteristic: lat lon

text: replicate=biological replicate 1

text: Cryptococcus Neoformans


text: The Second Military Medical University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.cl

text: Novogene

text: China:Shanghai

text: Homo sapiens

text: cryptococcal meningitis

text: ATCC

text: not collected

characteristic: organism

text: replicate=biological replicate 2

characteristic: replicate

text: Cryptococcus Neoformans

characteristic: title


text: The Second Military Medical University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: SRA accession

text: Novogene

text: China:Shanghai

text: Homo sapiens

text: cryptococcal meningitis

text: ATCC

text: not collected

text: replicate=biological replicate 3

text: Cryptococcus Neoformans


characteristic: External Id

text: USC

text: live

text: Generic

characteristic: NCBI submission package

text: pristane induced arthritis (PIA)

characteristic: disease state

text: Rattus norvegicus

text: Synovial tissue

text: Diseases_RTD_Treated-3 Day

characteristic: tag

text: Synovial tissue

characteristic: tissue


text: USC

text: live

text: Generic

text: pristane induced arthritis (PIA)

text: Rattus norvegicus

text: Synovial tissue

text: Synovial tissue


text: USC

text: live

text: Generic

text: naïve

text: Rattus norvegicus

text: Synovial tissue

text: Synovial tissue


text: USC

text: live

text: Generic

text: pristane induced arthritis (PIA)

text: Rattus norvegicus

text: Synovial tissue

text: Diseased

text: Synovial tissue


text: USC

text: live

text: Generic

text: pristane induced arthritis (PIA)

text: Rattus norvegicus

text: Synovial tissue

text: Diseases_RTD_Treated-5 Day

text: Synovial tissue


text: USC

text: live

text: Generic

text: pristane induced arthritis (PIA)

text: Rattus norvegicus

text: Synovial tissue

text: Diseases_SalineTreated-3 Day

text: Synovial tissue


text: USC

text: live

text: Generic

text: pristane induced arthritis (PIA)

text: Rattus norvegicus

text: Synovial tissue

text: Diseases_SalineTreated-5 Day

text: Synovial tissue


text: USC

text: live

text: Generic

text: healthy

text: Rattus norvegicus

text: Synovial tissue

text: Healthy_RTD_Treated-5 Day

text: Synovial tissue


text: USC

text: live

text: Generic

text: healthy

text: Rattus norvegicus

text: Synovial tissue

text: Healthy_RTD_Treated-3 Day

text: Synovial tissue


text: Epigenomics Lab, Microbiology & Immunology, University of British Columbia

text: live

text: Generic

text: Pleural Effusion

characteristic: anatomic site

characteristic: cell line

text: T-ALL cell

characteristic: cell type

text: anti-H3K4me3 antibody (9751S), lot# 7)

characteristic: chip antibody

text: Homo sapiens

text: sorted by FACS on day 3 post-treatment

characteristic: time

text: DMSO control

characteristic: treatment


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Pleural Effusion

text: T-ALL cell

text: anti-H3K4me1 antibody (C15410037- pAb-037-050, lot# A1657D)

text: Homo sapiens

characteristic: organism

text: sorted by FACS on day 3 post-treatment

characteristic: title

text: DMSO control


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Pleural Effusion

text: T-ALL cell

text: anti-H3K36me3 antibody (ab-9050, lot# GR56602-1)

text: Homo sapiens

text: sorted by FACS on day 3 post-treatment

text: DMSO control


characteristic: External Id

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Pleural Effusion

text: T-ALL cell

text: anti-H3K27me3 antibody (C15410195 - pAb-195-050, lot# A1811-001P)

text: Homo sapiens

text: sorted by FACS on day 3 post-treatment

text: DMSO control


text: live

text: Generic

text: Pleural Effusion

characteristic: anatomic site

text: T-ALL cell

text: anti-H3K27ac antibody (ab4729, lot# GR55451-1)

text: Homo sapiens

text: sorted by FACS on day 3 post-treatment

text: DMSO control


text: live

text: Generic

text: Pleural Effusion

characteristic: cell line

text: T-ALL cell

text: Homo sapiens

text: sorted by FACS on day 3 post-treatment

text: GSI inhibition


text: live

text: Generic

text: Pleural Effusion

text: T-ALL cell

characteristic: cell type

text: anti-H3K9me3 antibody (C15410056 - pAb-056-050, lot# A1675-001P)

text: Homo sapiens

text: sorted by FACS on day 3 post-treatment

text: GSI inhibition


text: live

text: Generic

text: Pleural Effusion

text: T-ALL cell

text: anti-H3K4me3 antibody (9751S), lot# 7)

characteristic: chip antibody

text: Homo sapiens

text: sorted by FACS on day 3 post-treatment

text: GSI inhibition


text: live

text: Generic

text: Pleural Effusion

text: T-ALL cell

text: Homo sapiens

text: sorted by FACS on day 3 post-treatment

characteristic: time

text: GSI inhibition


text: live

text: Generic

text: Pleural Effusion

text: T-ALL cell

text: Homo sapiens

text: sorted by FACS on day 3 post-treatment

text: GSI inhibition

characteristic: treatment


characteristic: INSDC center name

text: live

text: Generic

text: Pleural Effusion

text: T-ALL cell

text: Homo sapiens

text: sorted by FACS on day 3 post-treatment

text: GSI inhibition


characteristic: INSDC first public

text: live

text: Generic

text: Pleural Effusion

text: T-ALL cell

text: Homo sapiens

text: sorted by FACS on day 3 post-treatment

text: GSI inhibition


text: live

text: Generic

text: Pleural Effusion

text: T-ALL cell

text: Homo sapiens

characteristic: organism

text: sorted by FACS on day 5 post-transduction

text: non-silencing control


text: live

text: Generic

text: Pleural Effusion

text: T-ALL cell

text: Homo sapiens

characteristic: title

text: non-silencing control


characteristic: INSDC last update

text: live

text: Generic

text: Pleural Effusion

text: T-ALL cell

text: anti-H3K4me3 antibody (9751S), lot# 7)

text: Homo sapiens

text: non-silencing control


characteristic: INSDC secondary accession

text: live

text: Generic

text: Pleural Effusion

text: T-ALL cell

text: Homo sapiens

text: non-silencing control


text: live

characteristic: INSDC status

text: Generic

text: Pleural Effusion

text: T-ALL cell

text: Homo sapiens

text: non-silencing control


text: live

text: Generic

characteristic: NCBI submission model

text: Pleural Effusion

text: T-ALL cell

text: Homo sapiens

text: non-silencing control


characteristic: External Id

text: live

text: Generic

text: Pleural Effusion

text: T-ALL cell

text: Homo sapiens

text: non-silencing control


text: live

text: Generic

characteristic: NCBI submission package

text: Pleural Effusion

text: T-ALL cell

text: Homo sapiens

text: GFP-tagged shRUNX1-58 lentiviruses


text: live

text: Generic

characteristic: SRA accession

text: Pleural Effusion

text: T-ALL cell

text: Homo sapiens

text: GFP-tagged shRUNX1-58 lentiviruses


text: live

text: Generic

text: Pleural Effusion

characteristic: anatomic site

text: T-ALL cell

text: anti-H3K4me3 antibody (9751S), lot# 7)

text: Homo sapiens

text: GFP-tagged shRUNX1-58 lentiviruses


text: live

text: Generic

text: Pleural Effusion

characteristic: cell line

text: T-ALL cell

text: Homo sapiens

text: GFP-tagged shRUNX1-58 lentiviruses


text: live

text: Generic

text: Pleural Effusion

text: T-ALL cell

characteristic: cell type

text: Homo sapiens

text: GFP-tagged shRUNX1-58 lentiviruses


text: live

text: Generic

text: Pleural Effusion

text: T-ALL cell

characteristic: chip antibody

text: Homo sapiens

text: GFP-tagged shRUNX1-58 lentiviruses


text: live

text: Generic

text: Pleural Effusion

text: T-ALL cell

text: Homo sapiens

characteristic: time

text: GFP-tagged shRUNX1-58 lentiviruses


text: live

text: Generic

text: Pleural Effusion

text: T-ALL cell

text: Homo sapiens

text: GFP-tagged shRUNX1-59 lentiviruses

characteristic: treatment


characteristic: INSDC center name

text: live

text: Generic

text: Pleural Effusion

text: T-ALL cell

text: Homo sapiens

text: GFP-tagged shRUNX1-59 lentiviruses


characteristic: INSDC first public

text: live

text: Generic

text: Pleural Effusion

text: T-ALL cell

text: anti-H3K4me3 antibody (9751S), lot# 7)

text: Homo sapiens

text: GFP-tagged shRUNX1-59 lentiviruses


text: live

text: Generic

text: Pleural Effusion

text: T-ALL cell

text: Homo sapiens

characteristic: organism

text: GFP-tagged shRUNX1-59 lentiviruses


text: live

text: Generic

text: Pleural Effusion

text: T-ALL cell

text: Homo sapiens

characteristic: title

text: GFP-tagged shRUNX1-59 lentiviruses


characteristic: INSDC last update

text: live

text: Generic

text: Pleural Effusion

text: T-ALL cell

text: Homo sapiens

text: GFP-tagged shRUNX1-59 lentiviruses


characteristic: INSDC secondary accession

text: live

text: Generic

text: Pleural Effusion

text: T-ALL cell

text: Homo sapiens

text: GFP-tagged shRUNX1-59 lentiviruses


text: live

characteristic: INSDC status

text: Generic

text: Pleural Effusion

text: T-ALL cell

text: Homo sapiens

text: sorted by FACS on day 3 post-treatment

text: DMSO control


text: live

text: Generic

characteristic: NCBI submission model

text: Pleural Effusion

text: T-ALL cell

text: Homo sapiens

text: sorted by FACS on day 3 post-treatment

text: DMSO control


characteristic: External Id

text: The Second Military Medical University

text: live

text: Pathogen.cl

text: Novogene

characteristic: collected by

characteristic: collection date

text: China:Shanghai

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: cryptococcalmeningitis

characteristic: host disease

characteristic: isolate

text: self-constructed strain based on H99

characteristic: isolation source

text: not collected

characteristic: lat lon

text: biological replicate 1

characteristic: replicate

text: Cryptococcus Neoformans

characteristic: strain


text: The Second Military Medical University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.cl

characteristic: NCBI submission package

characteristic: SRA accession

text: Novogene

text: China:Shanghai

text: Homo sapiens

text: cryptococcalmeningitis

text: self-constructed strain based on H99

text: not collected

characteristic: organism

text: biological replicate 2

text: Cryptococcus Neoformans


text: The Second Military Medical University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

text: Novogene

text: China:Shanghai

text: Homo sapiens

text: cryptococcalmeningitis

text: ATCC

text: not collected

text: biological replicate 1

text: Cryptococcus Neoformans

characteristic: title


characteristic: External Id

text: The Second Military Medical University

text: live

text: Pathogen.cl

text: Novogene

characteristic: collected by

characteristic: collection date

text: China:Shanghai

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: cryptococcalmeningitis

text: ATCC

text: not collected

text: biological replicate 2

text: Cryptococcus Neoformans


text: live

text: Generic

text: Pleural Effusion

characteristic: anatomic site

text: T-cell Lymphoblastic Leukemia

characteristic: anatomic sub-site

characteristic: cell line

text: T-ALL cell

characteristic: cell type

text: Homo sapiens

text: sorted by FACS on day 3 post-treatment

characteristic: time


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Pleural Effusion

text: T-cell Lymphoblastic Leukemia

text: T-ALL cell

text: Homo sapiens


text: Dept. Microbiology and Molecular Medicine, University of Geneva, Faculty of Medicine / CMU

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: background strain

text: Wild type

characteristic: genotype

text: Caulobacter vibrioides

characteristic: organism

text: MipZ

text: ChIP-Seq_MipZ_Caulobacter_crescentus_NA1000(WT)(GHA-28)


text: yes

characteristic: 16S recovered

text: other

characteristic: 16S recovery software

characteristic: External Id

text: GNS Science

text: live

text: MIMAG

characteristic: NCBI submission model

text: metagenome-assembled genome

characteristic: analysis project type

text: Medium Quality Draft

characteristic: assembly quality

text: megahit v.1.1.3

characteristic: assembly software

text: kmer+coverage

characteristic: bin parameters

text: anvi'o

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: anvi'o

characteristic: completeness software

characteristic: contamination score

characteristic: contig N50/L50

text: anvi'o

characteristic: decontamination software

characteristic: depth

text: This BioSample is a metagenomic assembly obtained fro the hot springs metagenome BioSamples: SAMN0773289, SAMN07732890, and SAMN07732891

characteristic: derived-from

text: Metagenome-assembled genome from metagenomes SRR10063242, SRR10063241, and SRR10063240

characteristic: derived-from-SRA

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: description

text: island arc [ENVO:00000353]

text: caldera lake [ENVO:01001061] | neutral hot spring [ENVO:00002181]

text: brackish water [ENVO:00002019]

characteristic: environmental sample

text: New Zealand: Raoul Island

characteristic: geo loc name

characteristic: isolate

text: Hot springs and caldera lake in caldera of Raoul Island/Rangitaahua island arc volcano

characteristic: isolation source

text: 29.26 S 177.92 W

characteristic: lat lon

text: hot springs metagenome

characteristic: metagenome source

characteristic: metagenomic

characteristic: number of contigs

text: Pseudomonadota bacterium

text: no

characteristic: reassembly post binning

characteristic: relative coverage RIESMG

characteristic: relative coverage RIMBMG

characteristic: relative coverage RIWSMG

text: metagenomic assembly

characteristic: sample-type

text: 16S rRNA gene

characteristic: taxa id

text: Metagenome-assembled genome RI_95 from Raoul Island thermal springs

characteristic: title

characteristic: total assembly size


text: yes

characteristic: 16S recovered

text: other

characteristic: 16S recovery software

characteristic: External Id

text: GNS Science

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIMAG

characteristic: NCBI submission model

characteristic: NCBI submission package

text: metagenome-assembled genome

characteristic: analysis project type

text: Medium Quality Draft

characteristic: assembly quality

text: megahit v.1.1.3

characteristic: assembly software

text: kmer+coverage

characteristic: bin parameters

text: anvi'o

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: anvi'o

characteristic: completeness software

characteristic: contamination score

characteristic: contig N50/L50

text: anvi'o

characteristic: decontamination software

characteristic: depth

characteristic: derived-from

characteristic: derived-from-SRA

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: description

text: island arc [ENVO:00000353]

text: brackish water [ENVO:00002019]

text: New Zealand: Raoul Island

text: 29.26 S 177.92 W

text: hot springs metagenome

text: Acidobacteriota bacterium

characteristic: organism

text: no

text: metagenomic assembly

text: 16S rRNA gene

text: Metagenome-assembled genome RI_231 from Raoul Island thermal springs


text: yes

characteristic: 16S recovered

text: other

characteristic: 16S recovery software

characteristic: External Id

text: GNS Science

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIMAG

characteristic: NCBI submission model

characteristic: NCBI submission package

text: metagenome-assembled genome

text: Medium Quality Draft

text: megahit v.1.1.3

text: kmer+coverage

text: anvi'o

text: anvi'o

text: anvi'o

text: Keywords: GSC:MIxS;MIMAG:6.0

text: island arc [ENVO:00000353]

text: brackish water [ENVO:00002019]

characteristic: environmental sample

text: New Zealand: Raoul Island

characteristic: geo loc name

characteristic: isolate

characteristic: isolation source

text: 29.26 S 177.92 W

characteristic: lat lon

text: hot springs metagenome

characteristic: metagenome source

characteristic: metagenomic

characteristic: number of contigs

text: Armatimonadota bacterium

text: no

characteristic: reassembly post binning

characteristic: relative coverage RIESMG

characteristic: relative coverage RIMBMG

characteristic: relative coverage RIWSMG

text: metagenomic assembly

characteristic: sample-type

text: multi marker approach

characteristic: taxa id

text: Metagenome-assembled genome RI_401 from Raoul Island thermal springs

characteristic: title

characteristic: total assembly size


text: no

characteristic: 16S recovered

text: other

characteristic: 16S recovery software

characteristic: External Id

text: GNS Science

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIMAG

characteristic: NCBI submission model

characteristic: NCBI submission package

text: metagenome-assembled genome

characteristic: analysis project type

text: Medium Quality Draft

characteristic: assembly quality

text: megahit v.1.1.3

characteristic: assembly software

text: kmer+coverage

characteristic: bin parameters

text: anvi'o

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: anvi'o

characteristic: completeness software

characteristic: contamination score

characteristic: contig N50/L50

text: anvi'o

characteristic: decontamination software

characteristic: depth

characteristic: derived-from

characteristic: derived-from-SRA

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: description

text: island arc [ENVO:00000353]

text: brackish water [ENVO:00002019]

text: New Zealand: Raoul Island

text: 29.26 S 177.92 W

text: hot springs metagenome

text: Pseudomonadota bacterium

characteristic: organism

text: no

text: metagenomic assembly

text: multi marker approach

text: Metagenome-assembled genome RI_491 from Raoul Island thermal springs


text: no

characteristic: 16S recovered

text: other

characteristic: 16S recovery software

characteristic: External Id

text: GNS Science

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIMAG

characteristic: NCBI submission model

characteristic: NCBI submission package

text: metagenome-assembled genome

text: Medium Quality Draft

text: megahit v.1.1.3

text: kmer+coverage

text: anvi'o

text: anvi'o

text: anvi'o

text: Keywords: GSC:MIxS;MIMAG:6.0

text: island arc [ENVO:00000353]

text: brackish water [ENVO:00002019]

characteristic: environmental sample

text: New Zealand: Raoul Island

characteristic: geo loc name

characteristic: isolate

characteristic: isolation source

text: 29.26 S 177.92 W

characteristic: lat lon

text: hot springs metagenome

characteristic: metagenome source

characteristic: metagenomic

characteristic: number of contigs

text: Bacteroidota bacterium

text: no

characteristic: reassembly post binning

characteristic: relative coverage RIESMG

characteristic: relative coverage RIMBMG

characteristic: relative coverage RIWSMG

text: metagenomic assembly

characteristic: sample-type

text: multi marker approach

characteristic: taxa id

text: Metagenome-assembled genome RI_431 from Raoul Island thermal springs

characteristic: title

characteristic: total assembly size


text: yes

characteristic: 16S recovered

text: other

characteristic: 16S recovery software

characteristic: External Id

text: GNS Science

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIMAG

characteristic: NCBI submission model

characteristic: NCBI submission package

text: metagenome-assembled genome

characteristic: analysis project type

text: Medium Quality Draft

characteristic: assembly quality

text: megahit v.1.1.3

characteristic: assembly software

text: kmer+coverage

characteristic: bin parameters

text: anvi'o

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: anvi'o

characteristic: completeness software

characteristic: contamination score

characteristic: contig N50/L50

text: anvi'o

characteristic: decontamination software

characteristic: depth

characteristic: derived-from

characteristic: derived-from-SRA

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: description

text: island arc [ENVO:00000353]

text: brackish water [ENVO:00002019]

text: New Zealand: Raoul Island

text: 29.26 S 177.92 W

text: hot springs metagenome

text: Bacteroidota bacterium

characteristic: organism

text: no

text: metagenomic assembly

text: multi marker approach

text: Metagenome-assembled genome RI_134 from Raoul Island thermal springs


text: no

characteristic: 16S recovered

text: other

characteristic: 16S recovery software

characteristic: External Id

text: GNS Science

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIMAG

characteristic: NCBI submission model

characteristic: NCBI submission package

text: metagenome-assembled genome

text: Medium Quality Draft

text: megahit v.1.1.3

text: kmer+coverage

text: anvi'o

text: anvi'o

text: anvi'o

text: Keywords: GSC:MIxS;MIMAG:6.0

text: island arc [ENVO:00000353]

text: brackish water [ENVO:00002019]

characteristic: environmental sample

text: New Zealand: Raoul Island

characteristic: geo loc name

characteristic: isolate

characteristic: isolation source

text: 29.26 S 177.92 W

characteristic: lat lon

text: hot springs metagenome

characteristic: metagenome source

characteristic: metagenomic

characteristic: number of contigs

text: Paracoccaceae bacterium

text: no

characteristic: reassembly post binning

characteristic: relative coverage RIESMG

characteristic: relative coverage RIMBMG

characteristic: relative coverage RIWSMG

text: metagenomic assembly

characteristic: sample-type

text: multi marker approach

characteristic: taxa id

text: Metagenome-assembled genome RI_331 from Raoul Island thermal springs

characteristic: title

characteristic: total assembly size


text: no

characteristic: 16S recovered

text: other

characteristic: 16S recovery software

characteristic: External Id

text: GNS Science

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIMAG

characteristic: NCBI submission model

characteristic: NCBI submission package

text: metagenome-assembled genome

characteristic: analysis project type

text: Medium Quality Draft

characteristic: assembly quality

text: megahit v.1.1.3

characteristic: assembly software

text: kmer+coverage

characteristic: bin parameters

text: anvi'o

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: anvi'o

characteristic: completeness software

characteristic: contamination score

characteristic: contig N50/L50

text: anvi'o

characteristic: decontamination software

characteristic: depth

characteristic: derived-from

characteristic: derived-from-SRA

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: description

text: island arc [ENVO:00000353]

text: brackish water [ENVO:00002019]

text: New Zealand: Raoul Island

text: 29.26 S 177.92 W

text: hot springs metagenome

text: Bacteroidota bacterium

characteristic: organism

text: no

text: metagenomic assembly

text: multi marker approach

text: Metagenome-assembled genome RI_132 from Raoul Island thermal springs


text: yes

characteristic: 16S recovered

text: other

characteristic: 16S recovery software

characteristic: External Id

text: GNS Science

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIMAG

characteristic: NCBI submission model

characteristic: NCBI submission package

text: metagenome-assembled genome

text: Medium Quality Draft

text: megahit v.1.1.3

text: kmer+coverage

text: anvi'o

text: anvi'o

text: anvi'o

text: Keywords: GSC:MIxS;MIMAG:6.0

text: island arc [ENVO:00000353]

text: brackish water [ENVO:00002019]

characteristic: environmental sample

text: New Zealand: Raoul Island

characteristic: geo loc name

characteristic: isolate

characteristic: isolation source

text: 29.26 S 177.92 W

characteristic: lat lon

text: hot springs metagenome

characteristic: metagenome source

characteristic: metagenomic

characteristic: number of contigs

text: Chloroflexota bacterium

text: no

characteristic: reassembly post binning

characteristic: relative coverage RIESMG

characteristic: relative coverage RIMBMG

characteristic: relative coverage RIWSMG

text: metagenomic assembly

characteristic: sample-type

text: 16S rRNA gene

characteristic: taxa id

text: Metagenome-assembled genome RI_93 from Raoul Island thermal springs

characteristic: title

characteristic: total assembly size


text: no

characteristic: 16S recovered

text: other

characteristic: 16S recovery software

characteristic: External Id

text: GNS Science

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIMAG

characteristic: NCBI submission model

characteristic: NCBI submission package

text: metagenome-assembled genome

characteristic: analysis project type

text: Medium Quality Draft

characteristic: assembly quality

text: megahit v.1.1.3

characteristic: assembly software

text: kmer+coverage

characteristic: bin parameters

text: anvi'o

characteristic: binning software

characteristic: collection date

characteristic: completeness score

text: anvi'o

characteristic: completeness software

characteristic: contamination score

characteristic: contig N50/L50

text: anvi'o

characteristic: decontamination software

characteristic: depth

characteristic: derived-from

characteristic: derived-from-SRA

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: description

text: island arc [ENVO:00000353]

text: brackish water [ENVO:00002019]

text: New Zealand: Raoul Island

text: 29.26 S 177.92 W

text: hot springs metagenome

text: Bacteroidota bacterium

characteristic: organism

text: no

text: metagenomic assembly

text: multi marker approach

text: Metagenome-assembled genome RI_103 from Raoul Island thermal springs


characteristic: External Id

tag: Namespace:DOE Joint Genome Institute

text: DOE Joint Genome Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.eu

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Yosemitie 224299

characteristic: cultivar

text: Keywords: GSC:MIxS;MIGS:6.0

text: USA: Yosemite National Park, California

characteristic: geo loc name

text: Boechera lemmonii

text: Boechera lemmonii X paupercula X retrofracta var. Yosemite 224299

characteristic: title


text: DOE Joint Genome Institute

text: live

text: MIGS.eu

text: Yosemitie 224299

text: Keywords: GSC:MIxS;MIGS:6.0

text: USA: Yosemite National Park, California

text: Boechera lemmonii


text: Environmental | Terrestrial | Soil | Soil crust | Biological

characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: collection date

text: USA: California

text: non-moss soil biological crust

characteristic: isolation source

text: 34.3778 N 117.6098 W

characteristic: lat lon

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 50SNC


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: hypolithic moss crust

text: 34.3778 N 117.6098 W

text: biocrust metagenome

characteristic: organism

text: Biocrust microbial communities from Mojave Desert, California, United States - 16HMC


characteristic: External Id

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: non-moss soil biological crust

text: 34.3778 N 117.6098 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 53SNC


text: DOE Joint Genome Institute

characteristic: INSDC center name

text: live

text: Metagenome or environmental

text: USA: California

text: hypolithic moss crust

text: 34.7856 N 115.66 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 12HMC


text: DOE Joint Genome Institute

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: USA: California

text: non-moss soil biological crust

text: 34.7856 N 115.66 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 46SNC


text: DOE Joint Genome Institute

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: USA: California

text: non-moss soil biological crust

text: 34.3778 N 117.6098 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 51SNC


text: DOE Joint Genome Institute

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: USA: California

text: moss biological soil crust

text: 34.3778 N 117.6098 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 37SMC


text: DOE Joint Genome Institute

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: USA: California

text: hypolithic moss crust

text: 34.7856 N 115.66 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 14HMC


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

text: USA: California

text: non-moss soil biological crust

text: 34.3778 N 117.6098 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 55SNC


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: USA: California

text: moss biological soil crust

text: 34.3778 N 117.6098 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 34SMC


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: USA: California

text: hypolithic moss crust

text: 34.7856 N 115.66 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 15HMC


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: moss biological soil crust

text: 34.3778 N 117.6098 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 39SMC


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: non-moss soil biological crust

text: 34.3778 N 117.6098 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 52SNC


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: moss biological soil crust

text: 34.7856 N 115.66 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 33SMC


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: non-moss soil biological crust

text: 34.7856 N 115.66 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 48SNC


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: non-moss soil biological crust

text: 34.7856 N 115.66 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 47SNC


text: Environmental | Terrestrial | Soil | Soil crust | Biological

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: moss biological soil crust

text: 34.7856 N 115.66 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 32SMC


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: hypolithic non-moss crust

text: 34.3778 N 117.6098 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 25HNC


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: moss biological soil crust

text: 34.3778 N 117.6098 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 38SMC


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: moss biological soil crust

text: 34.7856 N 115.66 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 31SMC


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: hypolithic non-moss crust

text: 34.3778 N 117.6098 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 24HNC


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: moss biological soil crust

text: 34.3778 N 117.6098 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 36SMC


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: hypolithic moss crust

text: 34.7856 N 115.66 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 13HMC


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: hypolithic moss crust

text: 34.3778 N 117.6098 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 18HMC


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: hypolithic non-moss crust

text: 34.3778 N 117.6098 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 22HNC


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: hypolithic non-moss crust

text: 34.3778 N 117.6098 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 23HNC


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: hypolithic non-moss crust

text: 34.7856 N 115.66 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 19HNC


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: moss biological soil crust

text: 34.3778 N 117.6098 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 35SMC


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: moss biological soil crust

text: 34.7856 N 115.66 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 30SMC


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: hypolithic non-moss crust

text: 34.7856 N 115.66 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 21HNC


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: hypolithic moss crust

text: 34.3778 N 117.6098 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 17HMC


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: non-moss soil biological crust

text: 34.3778 N 117.6098 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 54SNC


text: Environmental | Terrestrial | Soil | Soil crust | Biological

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: non-moss soil biological crust

text: 34.3778 N 117.6098 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 49SNC


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: hypolithic non-moss crust

text: 34.7856 N 115.66 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 20HNC


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: hypolithic moss crust

text: 34.7856 N 115.66 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 11HMC


text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: USA: California

text: non-moss soil biological crust

text: 34.7856 N 115.66 W

text: biocrust metagenome

text: Biocrust microbial communities from Mojave Desert, California, United States - 45SNC


ABL

text: Shandong First Medical University

text: live

text: Invertebrate

text: China

text: Aedes albopictus

characteristic: host

text: laboratory-reared

characteristic: isolate

text: Pseudomonadota

text: whole organism

characteristic: sample type

text: whole organism

characteristic: tissue

text: Proteobacteria from Aedes albopictus


XB

text: NanKai University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: China:Zhejiang Province

characteristic: geo loc name

text: soil

text: Cyanobacteriota

text: whole organism

text: Microbe sample from Cyanobacteriota

characteristic: title


text: Host-associated | Fungi | Mycelium | Unclassified | Unclassified

characteristic: GOLD Ecosystem Classification

text: DOE Joint Genome Institute

text: live

text: Metagenome or environmental

text: Australia: Sydney, New South Wales

text: Eucalyptus grandis

text: pure culture in contact with E. grandis host

characteristic: isolation source

text: 33.8651 S 151.2099 E

characteristic: lat lon

text: fungus metagenome

characteristic: organism

text: Pisolithus tympanobaculus R1 ectomycorrhiza from Australia - CC_lgECM_R1-1


characteristic: External Id

text: DOE Joint Genome Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: Australia: Sydney, New South Wales

text: Eucalyptus grandis

text: 33.8651 S 151.2099 E

text: fungus metagenome

text: Pisolithus tympanobaculus R1 ectomycorrhiza from Australia - CC_lgECM_R1-2


text: DOE Joint Genome Institute

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Australia: Sydney, New South Wales

text: Eucalyptus grandis

text: 33.8651 S 151.2099 E

text: fungus metagenome

text: Pisolithus tympanobaculus R1 ectomycorrhiza from Australia - CC_lgECM_R1-5


text: University of Missouri

text: live

text: Plant

characteristic: SRA accession

text: mature

characteristic: age

text: broccoli

characteristic: cultivar

text: RNA-seq

characteristic: description

text: USA

characteristic: isolate

text: growth chamber

text: Brassica oleracea var. italica

text: tissue sample

characteristic: sample type

text: leaf

text: Plant sample from Brassica oleracea var. italica

text: italica

characteristic: variety


text: University of Missouri

text: live

text: Plant

text: mature

text: broccoli

text: RNA-seq

text: USA

characteristic: geo loc name

text: Early-Big

text: growth chamber

characteristic: isolation source

text: Brassica oleracea var. italica

text: tissue sample

text: leaf

characteristic: tissue

characteristic: title

text: italica


characteristic: External Id

text: Exercise and Nutrition Research Program, Mary MacKillop Institute for Health Research, Australian Catholic University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Concurrent

characteristic: condition

text: Homo sapiens

characteristic: organism

text: Vastus lateralis muscle

text: Pre

characteristic: time

text: Vastus lateralis muscle


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Concurrent

text: Homo sapiens

text: Vastus lateralis muscle

text: Post

text: Vastus lateralis muscle


text: live

text: Generic

text: Endurance

text: Homo sapiens

text: Vastus lateralis muscle

text: Post

text: Vastus lateralis muscle


text: live

text: Generic

text: Endurance

text: Homo sapiens

text: Vastus lateralis muscle

text: Pre

text: Vastus lateralis muscle


text: live

text: Generic

text: Resistance

text: Homo sapiens

text: Vastus lateralis muscle

text: Post

text: Vastus lateralis muscle


text: live

text: Generic

text: Resistance

text: Homo sapiens

text: Vastus lateralis muscle

text: Pre

text: Vastus lateralis muscle


text: University of Toronto

text: live

text: MIGS/MIMS/MIMARKS.miscellaneous

text: MIMARKS.survey

characteristic: alkalinity

characteristic: collection date

text: Keywords: GSC:MIxS;MIMARKS:6.0

characteristic: description

text: bioreactor

text: Leach Bed

text: Leachate

text: Canada: University of Toronto

characteristic: isolate

text: 62nd leachbed of the operation, fed with 17.2% CODFW, collected after 1 week of digestion, Odd BA used

characteristic: isolation-source

text: 43.6629 N 79.3957 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: ph

text: 10 mL

text: MIMARKS Survey related sample from anaerobic digester metagenome


characteristic: External Id

text: University of Toronto

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIGS/MIMS/MIMARKS.miscellaneous

text: MIMARKS.survey

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: bioreactor

text: Leach Bed

text: Leachate

text: Canada: University of Toronto

characteristic: geo loc name

text: 79th leachbed of the operation, fed with 21.7% CODFW, collected after 3 week of digestion

text: 43.6629 N 79.3957 W

text: anaerobic digester metagenome

text: 10 mL

characteristic: title


text: University of Toronto

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: MIGS/MIMS/MIMARKS.miscellaneous

text: MIMARKS.survey

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: bioreactor

text: Leach Bed

text: Leachate

text: Canada: University of Toronto

text: 80th leachbed of the operation, fed with 29.3% CODFW, collected after 6 hours of digestion

text: 43.6629 N 79.3957 W

text: anaerobic digester metagenome

characteristic: organism

text: 10 mL


text: Princeton University

text: live

characteristic: INSDC status

text: MIMAG.sediment

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: depth

text: This BioSample is a metagenomic assembly obtained from the fossil metagenome BioSample: SAMN12830550

characteristic: derived-from

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: elev

text: Dinosaur fossil bone microbiome

text: Dinosaur Park Formation

text: Sediment

characteristic: environmental sample

text: Canada:Albert

text: dinosaur fossil bone

characteristic: isolation source

text: 50.75 N 111.40 W

text: fossil metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Chloroflexota bacterium

text: metagenomic assembly

characteristic: sample-type

text: MIMAG Metagenome-assembled Genome sample from Chloroflexota bacterium


Halcyon malimbica

characteristic: External Id

text: Iridian Genomes

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Model organism or animal

characteristic: SRA accession

text: adult

characteristic: dev stage

text: IRGN 47OO6CGMHP

characteristic: isolate

text: Halcyon malimbica

text: tissue

characteristic: tissue

text: Model organism or animal sample from Halcyon malimbica


Halcyon smyrnensis

text: Iridian Genomes

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

text: adult

text: IRGN 5EJ5G1TQ7V

text: Halcyon smyrnensis

characteristic: organism

text: tissue

text: Model organism or animal sample from Halcyon smyrnensis

characteristic: title


Halcyon chelicuti

text: Iridian Genomes

text: live

text: Model organism or animal

characteristic: NCBI submission package

text: adult

text: IRGN AAZJJ3EYYE

text: Halcyon chelicuti

text: tissue

text: Model organism or animal sample from Halcyon chelicuti


Ispidina picta

text: Iridian Genomes

text: live

text: Model organism or animal

characteristic: collection date

text: adult

text: IRGN H72MP4AQ6Y

text: Ispidina picta

text: Model organism or animal sample from Ispidina picta


Halcyon leucocephala

text: Iridian Genomes

text: live

text: Model organism or animal

text: adult

text: IRGN BZQVMZ9D4M

text: Halcyon leucocephala

text: tissue

text: Model organism or animal sample from Halcyon leucocephala


text: Portland State University

text: live

text: Microbe, viral or environmental

characteristic: depth

text: This BioSample is a metagenomic assembly obtained from the hydrothermal vent metagenome BioSample: SAMN12239302

text: marine hydrothermal vent biome [ENVO:01000030]

text: marine hydrothermal vent [ENVO:01000122]

text: deep-sea hydrothermal deposit

characteristic: environmental sample

text: Pacific Ocean

characteristic: geo loc name

text: deep-sea hydrothermal deposit

characteristic: isolation-source

text: 34.86107892 S 179.0576362 E

characteristic: lat lon

text: hydrothermal vent metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Candidatus Aciduliprofundum boonei

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Candidatus Aciduliprofundum boonei


characteristic: External Id

text: Portland State University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the hydrothermal vent metagenome BioSample: SAMN12239305

text: deep-sea hydrothermal deposit

text: Pacific Ocean

characteristic: isolate

text: deep-sea hydrothermal deposit

text: 34.878866 S 179.071394 E

text: hydrothermal vent metagenome

text: Nitrososphaerota archaeon

text: metagenomic assembly

text: Microbe sample from Nitrososphaerota archaeon


text: Portland State University

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: This BioSample is a metagenomic assembly obtained from the hydrothermal vent metagenome BioSample: SAMN12239310

text: deep-sea hydrothermal deposit

text: Pacific Ocean

text: deep-sea hydrothermal deposit

text: 34.86207984 S 179.0572892 E

text: hydrothermal vent metagenome

text: Candidatus Aciduliprofundum boonei

text: metagenomic assembly


text: Portland State University

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: This BioSample is a metagenomic assembly obtained from the hydrothermal vent metagenome BioSample: SAMN12239311

text: deep-sea hydrothermal deposit

text: Pacific Ocean

text: deep-sea hydrothermal deposit

text: 34.86107624 S 179.0576384 E

text: hydrothermal vent metagenome

text: Candidatus Aciduliprofundum boonei

characteristic: organism

text: metagenomic assembly

characteristic: title


text: Portland State University

text: live

text: Microbe, viral or environmental

characteristic: collection date

characteristic: depth

text: This BioSample is a metagenomic assembly obtained from the hydrothermal vent metagenome BioSample: SAMN12239312

text: deep-sea hydrothermal deposit

characteristic: environmental sample

text: Pacific Ocean

text: deep-sea hydrothermal deposit

text: 34.8610792 S 179.057703 E

text: hydrothermal vent metagenome

text: Candidatus Aciduliprofundum boonei

text: metagenomic assembly


text: Portland State University

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the hydrothermal vent metagenome BioSample: SAMN12239314

text: deep-sea hydrothermal deposit

text: Pacific Ocean

characteristic: geo loc name

text: deep-sea hydrothermal deposit

characteristic: isolation-source

text: 34.86208959 S 179.0573881 E

characteristic: lat lon

text: hydrothermal vent metagenome

text: Nitrososphaerota archaeon

text: metagenomic assembly


name: Draft genome sequence of Veillonella seminalis CCUG 65427T

text: University of Gothenburg - CCUG

text: live

text: Microbe, viral or environmental

characteristic: culture collection

text: France: Montpellier

text: Homo sapiens

characteristic: host

text: semen

characteristic: isolation source

text: Veillonella seminalis

text: Cell culture

characteristic: sample type

text: CCUG 65427

characteristic: strain

text: Microbe sample from Veillonella seminalis

text: type strain of Veillonella seminalis

characteristic: type-material


characteristic: External Id

text: USDA-ARS

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Plant

characteristic: SRA accession

text: 5 weeks

characteristic: age

text: M. McGrath

characteristic: biomaterial provider

text: P. Galewski

characteristic: collected by

characteristic: cultivar

text: crop type comparison

characteristic: description

text: young leaf

characteristic: dev stage

text: population of 25 sequenced to 80X depth

characteristic: ecotype

text: USA: Michigan

text: sugar beet

characteristic: isolate

text: Beta vulgaris subsp. vulgaris

text: vulgaris

characteristic: sub species

text: young leaf

characteristic: tissue


BBTB

characteristic: External Id

text: USDA-ARS

text: live

text: Plant

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 5 weeks

text: M. McGrath

text: P. Galewski

characteristic: collection date

text: Bulls Blood Table Beet

text: crop type comparison

text: young leaf

text: population of 25 sequenced to 80X depth

text: USA: Michigan

characteristic: geo loc name

text: table beet

text: Beta vulgaris subsp. vulgaris

characteristic: organism

text: vulgaris

text: young leaf

text: Bulls Blood Table Beet

characteristic: title


text: USDA-ARS

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Plant

characteristic: SRA accession

text: 5 weeks

characteristic: age

text: M. McGrath

text: P. Galewski

text: Wisconsin Breeding Line

text: crop type comparison

text: young leaf

text: population of 25 sequenced to 80X depth

text: USA: Michigan

text: table beet

text: Beta vulgaris subsp. vulgaris

text: vulgaris

text: young leaf

text: Wisconsin Breeding Line


MAM

text: USDA-ARS

text: live

text: Plant

text: 5 weeks

text: M. McGrath

characteristic: biomaterial provider

text: P. Galewski

characteristic: collected by

text: Mammoth Red Fodder

characteristic: cultivar

text: crop type comparison

characteristic: description

text: young leaf

characteristic: dev stage

text: population of 25 sequenced to 80X depth

characteristic: ecotype

text: USA: Michigan

text: fodder beet

characteristic: isolate

text: Beta vulgaris subsp. vulgaris

text: vulgaris

text: young leaf

text: Mammoth Red Fodder


Merops pusillus

characteristic: External Id

text: Iridian Genomes

text: live

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

text: adult

text: IRGN SEE57XE9B0

text: Merops pusillus

text: tissue

characteristic: tissue

text: Model organism or animal sample from Merops pusillus


Megaceryle maxima

text: Iridian Genomes

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Model organism or animal

text: adult

text: IRGN 7Q4JQACGN1

text: Megaceryle maxima

characteristic: organism

text: tissue

text: Model organism or animal sample from Megaceryle maxima

characteristic: title


Megaceryle alcyon

text: Iridian Genomes

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: SRA accession

text: adult

text: IRGN B813CVATOM

text: Megaceryle alcyon

text: tissue

text: Model organism or animal sample from Megaceryle alcyon


Megaceryle torquata

text: Iridian Genomes

text: live

text: Model organism or animal

text: adult

text: IRGN PDCOFV8MGS

text: Megaceryle torquata

text: tissue

text: Model organism or animal sample from Megaceryle torquata


Momotus momota

text: Iridian Genomes

text: live

text: Model organism or animal

text: adult

text: IRGN 15LBX3KN67

text: Momotus momota

text: tissue

text: Model organism or animal sample from Momotus momota


Actenoides hombroni

text: Iridian Genomes

text: live

text: Model organism or animal

text: adult

text: IRGN 3441YUFN42

text: Actenoides hombroni

text: tissue

text: Model organism or animal sample from Actenoides hombroni


Alcedo quadribrachys

text: Iridian Genomes

text: live

text: Model organism or animal

text: adult

text: IRGN 6702028B7T

text: Alcedo quadribrachys

text: tissue

text: Model organism or animal sample from Alcedo quadribrachys


Actenoides lindsayi

text: Iridian Genomes

text: live

text: Model organism or animal

characteristic: collection date

text: adult

text: IRGN 9SJTFMH8LE

text: Actenoides lindsayi

text: tissue

text: Model organism or animal sample from Actenoides lindsayi


Alcedo atthis bengalensis

text: Iridian Genomes

text: live

text: Model organism or animal

text: adult

text: IRGN 8NDWPLVNRM

text: Alcedo atthis

text: tissue

text: Model organism or animal sample from Alcedo atthis


Alcedo semitorquata

text: Iridian Genomes

text: live

text: Model organism or animal

text: adult

text: IRGN BEWF2RYO8G

text: Alcedo semitorquata

text: tissue

text: Model organism or animal sample from Alcedo semitorquata


text: lanzhou university of technology

text: live

text: Microbe, viral or environmental

text: China:Yumen

characteristic: geo loc name

text: soil

characteristic: host

text: Rhizosphere

text: Bacillus sp. (in: firmicutes)

text: metagenomic assembly

characteristic: sample type

text: Lactococcus

characteristic: strain

text: Microbe sample from Bacillus sp. (in: firmicutes)


characteristic: External Id

text: The Pennsylvania State University

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.host-associated

characteristic: Vial

characteristic: depth (m)

text: Keywords: GSC:MIxS;MIMS:6.0

characteristic: description

text: deep-sea coral community

text: deep-sea coral community

text: seawater

text: USA: Gulf of Mexico

text: Callogorgia

text: deep-sea coral community colony S3-14

text: 28.064 N 89.718 W

characteristic: lat lon

text: coral metagenome

characteristic: site

text: Metagenome of Callogorgia delta 16661 MC885 S3-14

type: derived-from


text: The Pennsylvania State University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIMS.me

characteristic: NCBI submission model

text: MIGS/MIMS/MIMARKS.host-associated

characteristic: NCBI submission package

text: Keywords: GSC:MIxS;MIMS:6.0

text: deep-sea coral community

text: deep-sea coral community

text: seawater

text: USA: Gulf of Mexico

text: Callogorgia

text: deep-sea coral community colony S14-5

text: 28.193 N 89.800 W

text: coral metagenome

characteristic: organism

text: Metagenome of Callogorgia delta 16585 MC751 S14-5


Corythornis leucogaster

text: Iridian Genomes

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: SRA accession

text: adult

characteristic: dev stage

text: IRGN V5Z1USBMU3

characteristic: isolate

text: Corythornis leucogaster

text: tissue

characteristic: tissue

text: Model organism or animal sample from Corythornis leucogaster

characteristic: title


Halcyon badia

characteristic: External Id

text: Iridian Genomes

text: live

text: Model organism or animal

text: adult

text: IRGN PYBLPGWE58

text: Halcyon badia

text: tissue

text: Model organism or animal sample from Halcyon badia


Chloroceryle inda

text: Iridian Genomes

text: live

text: Model organism or animal

text: adult

text: IRGN XSDVVHHFKO

text: Chloroceryle inda

text: IRGN:XSDVVHHFKO

text: tissue

text: Model organism or animal sample from Chloroceryle inda


Chloroceryle americana

text: Iridian Genomes

text: live

text: Model organism or animal

text: adult

text: IRGN LZ8ZHI83C7

text: Chloroceryle americana

text: tissue

text: Model organism or animal sample from Chloroceryle americana


Corythornis cristatus

text: Iridian Genomes

text: live

text: Model organism or animal

text: adult

text: IRGN O9RTRNBQEF

text: Corythornis cristatus

text: tissue

text: Model organism or animal sample from Corythornis cristatus


Ceyx melanurus

text: Iridian Genomes

text: live

text: Model organism or animal

text: adult

text: IRGN 26BR11BSXK

text: Ceyx melanurus

text: tissue

text: Model organism or animal sample from Ceyx melanurus


Ceryle rudis

text: Iridian Genomes

text: live

text: Model organism or animal

text: adult

text: IRGN 76FE3DOYDO

text: Ceryle rudis

text: tissue

text: Model organism or animal sample from Ceryle rudis


Ceyx lecontei

text: Iridian Genomes

text: live

text: Model organism or animal

text: adult

text: IRGN FFQXHTPSU3

text: Ispidina lecontei

characteristic: specimen voucher

text: tissue

text: Model organism or animal sample from Ispidina lecontei


Chloroceryle amazona

text: Iridian Genomes

text: live

text: Model organism or animal

text: adult

text: IRGN GZCI2S7TMW

text: Chloroceryle amazona

text: tissue

text: Model organism or animal sample from Chloroceryle amazona


Ceyx erithaca

text: Iridian Genomes

text: live

text: Model organism or animal

text: adult

text: IRGN 1PJA27LXXK

text: Ceyx erithaca

text: tissue

text: Model organism or animal sample from Ceyx erithaca


text: dbGaP

text: live

text: Generic

text: CS-MATCH-0007 Arm Y

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: GRU-COL

text: Homo sapiens

text: female

characteristic: sex

text: Clinical Trial

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

text: CS-MATCH-0007 Arm Y

characteristic: submitter handle

text: Sample from a human female participant in the dbGaP study Genomic Characterization CS-MATCH-0007 Arm Y


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: CS-MATCH-0007 Arm Y

text: GRU-COL

text: Homo sapiens

characteristic: organism

text: female

text: Clinical Trial

text: Genomic Characterization CS-MATCH-0007 Arm Y

text: CS-MATCH-0007 Arm Y


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

text: CS-MATCH-0007 Arm Y

text: GRU-COL

text: Homo sapiens

text: male

text: Clinical Trial

text: CS-MATCH-0007 Arm Y

text: Sample from a human male participant in the dbGaP study Genomic Characterization CS-MATCH-0007 Arm Y

characteristic: title


characteristic: External Id

text: College of Natural Resources and Environment

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

characteristic: collection date

text: China

characteristic: geo loc name

text: Soil

characteristic: host

text: bulk soil

characteristic: isolate

text: Loess Plateau

characteristic: isolation source

text: Bacillus sp. (in: firmicutes)

text: Soil

characteristic: sample type

text: Firmicutes

characteristic: strain


Agromyces aureus JCM 32431T

text: National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Contr

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

characteristic: culture collection

text: Agromyces aureus

text: pure cultures of bacteria

text: JCM 32431

text: Microbe sample from Agromyces aureus

text: type strain of Agromyces aureus

characteristic: type-material


text: University of Macau

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Nakaseomyces glabratus

characteristic: organism

text: Control

text: Microbe sample from Nakaseomyces glabratus


characteristic: External Id

text: University of Macau

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: Nakaseomyces glabratus

text: H2O2 treated

characteristic: title


text: ILVO

text: live

text: MIMARKS.specimen

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIMARKS:6.0

characteristic: description

text: Godetia sp.

text: South Africa

characteristic: geo loc name

text: Phytophthora kelmanii

text: MIMARKS Specimen sample from Phytophthora kelmanii


text: ILVO

text: live

text: MIMARKS.specimen

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: Salix caprea | Olea europaea | forest

text: Portugal

characteristic: isolate

text: MIMARKS Specimen sample from Phytophthora pseudocryptogea x Phytophthora sp. 'kelmania'


text: ILVO

text: live

text: MIMARKS.specimen

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: Salix caprea | Olea europaea | forest

text: Portugal

text: Phytophthora pseudocryptogea x Phytophthora sp. 'kelmania'


text: ILVO

text: live

text: MIMARKS.specimen

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: river

text: Portugal


text: Portland State University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: This BioSample is a metagenomic assembly obtained from the hydrothermal vent metagenome BioSample: SAMN12239298

text: marine hydrothermal vent biome [ENVO:01000030]

text: marine hydrothermal vent [ENVO:01000122]

text: deep-sea hydrothermal deposit

characteristic: environmental sample

text: Pacific Ocean

text: deep-sea hydrothermal deposit

characteristic: isolation-source

text: 34.862587 S 179.058108 E

characteristic: lat lon

text: hydrothermal vent metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Nitrospirota bacterium

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Nitrospirota bacterium


text: Portland State University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: This BioSample is a metagenomic assembly obtained from the hydrothermal vent metagenome BioSample: SAMN12239299

text: deep-sea hydrothermal deposit

text: Pacific Ocean

text: deep-sea hydrothermal deposit

text: 34.88234384 S 179.0682732 E

text: hydrothermal vent metagenome

text: Campylobacterota bacterium

text: metagenomic assembly

text: Microbe sample from Campylobacterota bacterium


characteristic: External Id

text: Portland State University

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the hydrothermal vent metagenome BioSample: SAMN12239301

text: deep-sea hydrothermal deposit

text: Pacific Ocean

text: deep-sea hydrothermal deposit

text: 34.85791961 S 179.0519333 E

text: hydrothermal vent metagenome

text: Acidobacteriota bacterium

characteristic: organism

text: metagenomic assembly

text: Microbe sample from Acidobacteriota bacterium

characteristic: title


text: Portland State University

text: live

text: Microbe, viral or environmental

text: deep-sea hydrothermal deposit

text: Pacific Ocean

characteristic: geo loc name

characteristic: isolate

text: deep-sea hydrothermal deposit

text: 34.85791961 S 179.0519333 E

text: hydrothermal vent metagenome

text: Paracoccaceae bacterium

text: metagenomic assembly

text: Microbe sample from Paracoccaceae bacterium


text: Portland State University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: This BioSample is a metagenomic assembly obtained from the hydrothermal vent metagenome BioSample: SAMN12239303

text: deep-sea hydrothermal deposit

characteristic: environmental sample

text: Pacific Ocean

text: deep-sea hydrothermal deposit

text: 34.878368 S 179.071443 E

text: hydrothermal vent metagenome

text: Candidatus Omnitrophota bacterium

text: metagenomic assembly

text: Microbe sample from Candidatus Omnitrophota bacterium


text: Portland State University

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the hydrothermal vent metagenome BioSample: SAMN12239304

text: water

text: Pacific Ocean

text: water

characteristic: isolation-source

text: 34.861552 S 179.057153 E

characteristic: lat lon

text: hydrothermal vent metagenome

text: Pseudomonadota bacterium

text: metagenomic assembly

text: Microbe sample from Pseudomonadota bacterium


text: Portland State University

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the hydrothermal vent metagenome BioSample: SAMN12239305

text: deep-sea hydrothermal deposit

text: Pacific Ocean

text: deep-sea hydrothermal deposit

text: 34.878866 S 179.071394 E

text: hydrothermal vent metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Acidobacteriota bacterium

text: metagenomic assembly


text: Portland State University

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: deep-sea hydrothermal deposit

text: Pacific Ocean

text: deep-sea hydrothermal deposit

text: 34.878866 S 179.071394 E

text: hydrothermal vent metagenome

text: Armatimonadota bacterium

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Armatimonadota bacterium


text: Portland State University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: deep-sea hydrothermal deposit

text: Pacific Ocean

text: deep-sea hydrothermal deposit

text: 34.878866 S 179.071394 E

text: hydrothermal vent metagenome

text: Thermotogota bacterium

text: metagenomic assembly

text: Microbe sample from Thermotogota bacterium


text: Portland State University

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: This BioSample is a metagenomic assembly obtained from the hydrothermal vent metagenome BioSample: SAMN12239307

text: deep-sea hydrothermal deposit

text: Pacific Ocean

text: deep-sea hydrothermal deposit

text: 34.85791311 S 179.0519346 E

text: hydrothermal vent metagenome

text: Nitrospirota bacterium

text: metagenomic assembly


characteristic: External Id

text: Portland State University

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: deep-sea hydrothermal deposit

text: Pacific Ocean

text: deep-sea hydrothermal deposit

text: 34.85791311 S 179.0519346 E

text: hydrothermal vent metagenome

text: Paracoccaceae bacterium

text: metagenomic assembly


text: Portland State University

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the hydrothermal vent metagenome BioSample: SAMN12239308

text: deep-sea hydrothermal deposit

text: Pacific Ocean

text: deep-sea hydrothermal deposit

text: 34.86150855 S 179.0573001 E

text: hydrothermal vent metagenome

text: Nitrospirota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: title


text: Portland State University

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the hydrothermal vent metagenome BioSample: SAMN12239309

text: marine hydrothermal vent biome [ENVO:01000030]

text: deep-sea hydrothermal deposit

text: Pacific Ocean

characteristic: geo loc name

characteristic: isolate

text: deep-sea hydrothermal deposit

text: 34.86111866 S 179.0576651 E

text: hydrothermal vent metagenome

text: Bacteroidota bacterium

text: metagenomic assembly

text: Microbe sample from Bacteroidota bacterium


text: Portland State University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: This BioSample is a metagenomic assembly obtained from the hydrothermal vent metagenome BioSample: SAMN12239310

text: marine hydrothermal vent [ENVO:01000122]

text: deep-sea hydrothermal deposit

characteristic: environmental sample

text: Pacific Ocean

text: deep-sea hydrothermal deposit

text: 34.86207984 S 179.0572892 E

text: hydrothermal vent metagenome

text: Campylobacterota bacterium

text: metagenomic assembly


text: Portland State University

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the hydrothermal vent metagenome BioSample: SAMN12239311

text: deep-sea hydrothermal deposit

text: Pacific Ocean

text: deep-sea hydrothermal deposit

characteristic: isolation-source

text: 34.86107624 S 179.0576384 E

characteristic: lat lon

text: hydrothermal vent metagenome

text: Acidobacteriota bacterium

text: metagenomic assembly


text: Portland State University

text: live

text: Microbe, viral or environmental

text: deep-sea hydrothermal deposit

text: Pacific Ocean

text: deep-sea hydrothermal deposit

text: 34.86107624 S 179.0576384 E

text: hydrothermal vent metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Campylobacterota bacterium

text: metagenomic assembly

text: Microbe sample from Campylobacterota bacterium


text: Portland State University

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: deep-sea hydrothermal deposit

text: Pacific Ocean

text: deep-sea hydrothermal deposit

text: 34.86107624 S 179.0576384 E

text: hydrothermal vent metagenome

text: Candidatus Omnitrophota bacterium

text: metagenomic assembly

characteristic: sample type


text: Portland State University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the hydrothermal vent metagenome BioSample: SAMN12239312

text: deep-sea hydrothermal deposit

text: Pacific Ocean

text: deep-sea hydrothermal deposit

text: 34.8610792 S 179.057703 E

text: hydrothermal vent metagenome

text: Acidobacteriota bacterium

text: metagenomic assembly

text: Microbe sample from Acidobacteriota bacterium