characteristic: External Id

text: Molecular and Human Genetics, Baylor College of Medicine

characteristic: INSDC center name

text: live

text: Generic

text: PBMC

characteristic: cell type

text: Homo sapiens

text: PBMC Line

text: DMSO

characteristic: treatment

characteristic: treatment time


status: PUBLIC

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: PBMC

tag: attribute

text: Homo sapiens

characteristic: organism

text: PBMC Line

characteristic: title


text: Ningbo University

text: live

text: Metagenome or environmental

text: control group of day 0

characteristic: description

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960759 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: control group of day 0

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960760 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: control group of day 0

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960761 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: control group of day 0

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960762 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: control group of day 0

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960763 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: control group of day 0

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960764 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: control group of day 0

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960765 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: control group of day 0

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960766 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: control group of day 0

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960767 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: control group of day 0

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960768 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: DBP group of day 7

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960769 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: DBP group of day 7

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960770 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: DBP group of day 7

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960771 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: DBP group of day 7

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960772 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: DBP group of day 7

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960773 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: DBP group of day 7

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960774 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: DBP group of day 7

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960775 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: DBP group of day 7

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960776 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: DBP group of day 7

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960777 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: DBP group of day 7

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960778 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: control group of day 7

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960779 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: control group of day 7

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960780 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: control group of day 7

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960781 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: control group of day 7

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960782 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: control group of day 7

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960783 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: control group of day 7

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960784 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: control group of day 7

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960785 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: control group of day 7

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960786 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: control group of day 7

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960787 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: control group of day 7

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960788 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: DBP group of day 14

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960789 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: DBP group of day 14

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960790 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: DBP group of day 14

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960791 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: DBP group of day 14

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960792 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: DBP group of day 14

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960793 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: DBP group of day 14

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960794 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: DBP group of day 14

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960795 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: DBP group of day 14

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960796 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: DBP group of day 14

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960797 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: DBP group of day 14

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960798 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: control group of day 14

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960799 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: control group of day 14

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960800 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: control group of day 14

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960801 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: control group of day 14

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960802 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: control group of day 14

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960803 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: control group of day 14

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960804 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: control group of day 14

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960805 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: control group of day 14

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960806 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: control group of day 14

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960807 E

text: crustacean metagenome


text: Ningbo University

text: live

text: Metagenome or environmental

text: control group of day 14

text: China: Ningbo

text: mud crab organism

text: 29.781951 N 121.960808 E

text: crustacean metagenome


si-Ctrl rep1

text: Shandong University

text: live

text: Human

text: ATCC

text: Homo sapiens

text: biological replicate 1

characteristic: replicate

text: cell culture

text: not determined

characteristic: sex

text: human first-trimester placenta

characteristic: tissue

text: Human sample from Homo sapiens

text: transfacted with si-Control for 48h


si-Ctrl rep2

characteristic: External Id

text: Shandong University

characteristic: INSDC center name

text: live

text: Human

text: ATCC

text: Homo sapiens

text: biological replicate 2

text: cell culture

text: not determined

text: human first-trimester placenta

text: Human sample from Homo sapiens

text: transfacted with si-Control for 48h


si-Ctrl rep3

text: Shandong University

text: live

text: Human

text: ATCC

text: Homo sapiens

text: biological replicate 3

text: cell culture

text: not determined

text: human first-trimester placenta

text: Human sample from Homo sapiens

text: transfacted with si-Control for 48h

characteristic: treatment


si-ITGB1 rep1

text: Shandong University

text: live

text: Human

text: ATCC

text: Homo sapiens

text: biological replicate 1

text: cell culture

text: not determined

text: human first-trimester placenta

text: Human sample from Homo sapiens

text: transfacted with si-ITGB1 for 48h


si-ITGB1 rep2

text: Shandong University

text: live

text: Human

text: ATCC

text: Homo sapiens

text: biological replicate 2

text: cell culture

text: not determined

text: human first-trimester placenta

text: Human sample from Homo sapiens

text: transfacted with si-ITGB1 for 48h


si-ITGB1 rep3

text: Shandong University

text: live

text: Human

text: ATCC

text: Homo sapiens

text: biological replicate 3

text: cell culture

text: not determined

text: human first-trimester placenta

text: Human sample from Homo sapiens

text: transfacted with si-ITGB1 for 48h


text: Universidade Federal de Sao Carlos (UFSCar)

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: Brazil

characteristic: geo loc name

text: Xanthomonas citri

characteristic: host

text: Xanthomonas citri 306

characteristic: lab host

text: Xanthomonas phage vB_XciM_LucasX

text: phage genomic DNA

characteristic: sample type

text: Microbe sample from Xanthomonas phage vB_XciM_LucasX


Nocardioides sp. J2M5

text: Kyung Hee university

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: South Korea

text: gut of fresh water shrimp

characteristic: isolation source

text: Nocardioides palaemonis

text: mono bacterial isolate

characteristic: strain

text: Microbe sample from Nocardioides sp

text: type strain of Nocardioides palaemonis

characteristic: type-material


text: Shenzhen University

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: SRA accession

text: China:Shenzhen

text: Mus musculus

text: Bacillota

characteristic: organism

text: Biological duplication 1

characteristic: repulicate

text: stool

text: Bacterium

text: Microbe sample from Bacillota

characteristic: title


characteristic: External Id

text: Shenzhen University

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: China:Shenzhen

characteristic: geo loc name

text: Mus musculus

text: Bacillota

text: Biological duplication 2

text: stool

text: Bacterium

text: Microbe sample from Bacillota


text: Shenzhen University

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: China:Shenzhen

text: Mus musculus

characteristic: host

text: Bacillota

text: Biological duplication 3

text: stool

characteristic: sample type

text: Bacterium

text: Microbe sample from Bacillota


text: Shenzhen University

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: China:Shenzhen

text: Mus musculus

text: Bacillota

text: Biological duplication 4

text: stool

text: Bacterium

text: Microbe sample from Bacillota


text: Shenzhen University

text: live

text: Microbe, viral or environmental

text: China:Shenzhen

text: Mus musculus

text: Bacillota

text: Biological duplication 5

text: stool

text: Bacterium

characteristic: strain

text: Microbe sample from Bacillota


text: Shenzhen University

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

text: China:Shenzhen

text: Mus musculus

text: Bacillota

text: Biological duplication 6

text: stool

text: Bacterium

text: Microbe sample from Bacillota


text: Shenzhen University

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: China:Shenzhen

text: Mus musculus

text: Bacillota

text: Biological duplication 7

text: stool

text: Bacterium

text: Microbe sample from Bacillota


text: Shenzhen University

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: China:Shenzhen

text: Mus musculus

text: Pseudomonadota

text: Biological duplication 1

text: stool

text: Bacterium

text: Microbe sample from Pseudomonadota


text: Shenzhen University

text: live

text: Microbe, viral or environmental

text: China:Shenzhen

text: Mus musculus

text: Pseudomonadota

characteristic: organism

text: Biological duplication 2

text: stool

text: Bacterium

text: Microbe sample from Pseudomonadota


text: Shenzhen University

text: live

text: Microbe, viral or environmental

text: China:Shenzhen

text: Mus musculus

text: Pseudomonadota

text: Biological duplication 3

characteristic: repulicate

text: stool

text: Bacterium

text: Microbe sample from Pseudomonadota


text: Shenzhen University

text: live

text: Microbe, viral or environmental

text: China:Shenzhen

text: Mus musculus

text: Pseudomonadota

text: Biological duplication 4

text: stool

text: Bacterium

text: Microbe sample from Pseudomonadota

characteristic: title


characteristic: External Id

text: Shenzhen University

text: live

text: Microbe, viral or environmental

text: China:Shenzhen

text: Mus musculus

text: Pseudomonadota

text: Biological duplication 5

text: stool

text: Bacterium

text: Microbe sample from Pseudomonadota


text: Shenzhen University

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: China:Shenzhen

text: Mus musculus

text: Pseudomonadota

text: Biological duplication 6

text: stool

text: Bacterium

text: Microbe sample from Pseudomonadota


text: Shenzhen University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: China:Shenzhen

text: Mus musculus

text: Pseudomonadota

text: Biological duplication 7

text: stool

text: Bacterium

text: Microbe sample from Pseudomonadota


text: University of Utah

text: live

text: MIMAG.host-associated

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: description

characteristic: environmental-sample

text: USA: Salt Lake City

characteristic: geo loc name

text: Neotoma albigula

characteristic: isolate

text: stool

characteristic: isolation source

text: 40.76 N 111.89 W

text: gut metagenome

characteristic: metagenome-source

characteristic: metagenomic

text: Bacillota bacterium

text: metagenomic assembly

characteristic: sample-type

text: unclassified_Firmicutes bacterium 5_19

text: MIMAG Metagenome-assembled Genome sample from Bacillota bacterium

type: derived-from


text: University of Utah

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIMAG.host-associated

characteristic: NCBI submission model

text: Keywords: GSC:MIxS;MIMAG:6.0

text: USA: Salt Lake City

text: Neotoma albigula

characteristic: host

text: stool

text: 40.76 N 111.89 W

text: gut metagenome

text: Bacillota bacterium

text: metagenomic assembly

text: unclassified_Firmicutes bacterium 4_25


text: University of Utah

text: live

text: MIMAG.host-associated

characteristic: NCBI submission package

text: Keywords: GSC:MIxS;MIMAG:6.0

text: USA: Salt Lake City

text: Neotoma albigula

text: stool

text: 40.76 N 111.89 W

text: gut metagenome

text: Bacillota bacterium

characteristic: organism

text: metagenomic assembly

text: Firmicutes 3_1

characteristic: title


characteristic: External Id

text: University of Utah

characteristic: INSDC center name

text: live

text: MIMAG.host-associated

text: Keywords: GSC:MIxS;MIMAG:6.0

text: USA: Salt Lake City

text: Neotoma albigula

text: stool

text: 40.76 N 111.89 W

text: gut metagenome

text: Bacillota bacterium

text: metagenomic assembly

text: unclassified_Firmicutes bacterium CAG:475 2_10


text: University of Utah

text: live

text: MIMAG.host-associated

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: description

characteristic: environmental-sample

text: USA: Salt Lake City

text: Neotoma albigula

text: stool

text: 40.76 N 111.89 W

text: gut metagenome

text: Bacillota bacterium

text: metagenomic assembly

text: unclassified_Firmicutes bacterium 1_18


text: University of Utah

text: live

text: MIMAG.host-associated

text: Keywords: GSC:MIxS;MIMAG:6.0

text: USA: Salt Lake City

characteristic: geo loc name

text: Neotoma albigula

characteristic: isolate

text: stool

text: 40.76 N 111.89 W

text: gut metagenome

text: Bacillus sp. (in: firmicutes)

text: metagenomic assembly

text: Bacillus_unclassified 3_20

text: MIMAG Metagenome-assembled Genome sample from Bacillus sp. (in: firmicutes)


text: University of Utah

text: live

text: MIMAG.host-associated

text: Keywords: GSC:MIxS;MIMAG:6.0

text: USA: Salt Lake City

text: Neotoma albigula

text: stool

characteristic: isolation source

text: 40.76 N 111.89 W

text: gut metagenome

characteristic: metagenome-source

text: Bacillota bacterium

text: metagenomic assembly

text: unclassified_Firmicutes bacterium CAG:534 1_19


name: Trichophyton rubrum CBS 118892 control replicate 1

text: Control

characteristic: Condition

text: University of Lodz

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: Replicate

characteristic: SRA accession

text: Poland: Lodz

text: Trichophyton rubrum CBS 118892

text: total RNA

text: CBS 118892

characteristic: strain

text: Trichophyton rubrum CBS 118892 control


name: Trichophyton rubrum CBS 118892 control replicate 2

text: Control

text: University of Lodz

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: Poland: Lodz

text: Trichophyton rubrum CBS 118892

text: total RNA

text: CBS 118892

text: Trichophyton rubrum CBS 118892 control


name: Trichophyton rubrum CBS 118892 control replicate 3

text: Control

characteristic: External Id

text: University of Lodz

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: Poland: Lodz

text: Trichophyton rubrum CBS 118892

characteristic: organism

text: total RNA

text: CBS 118892

text: Trichophyton rubrum CBS 118892 control

characteristic: title


name: Trichophyton rubrum CBS 118892 control replicate 4

text: Control

text: University of Lodz

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: Poland: Lodz

text: Trichophyton rubrum CBS 118892

text: total RNA

text: CBS 118892

text: Trichophyton rubrum CBS 118892 control


name: Trichophyton rubrum CBS 118892 treated replicate 1

text: Treated

text: University of Lodz

text: live

text: Microbe, viral or environmental

text: Poland: Lodz

text: Trichophyton rubrum CBS 118892

text: total RNA

text: CBS 118892

text: Trichophyton rubrum CBS 118892 treated


name: Trichophyton rubrum CBS 118892 treated replicate 2

text: Treated

text: University of Lodz

text: live

text: Microbe, viral or environmental

text: Poland: Lodz

text: Trichophyton rubrum CBS 118892

text: total RNA

text: CBS 118892

text: Trichophyton rubrum CBS 118892 treated


name: Trichophyton rubrum CBS 118892 treated replicate 3

text: Treated

text: University of Lodz

text: live

text: Microbe, viral or environmental

text: Poland: Lodz

text: Trichophyton rubrum CBS 118892

text: total RNA

text: CBS 118892

text: Trichophyton rubrum CBS 118892 treated


name: Trichophyton rubrum CBS 118892 treated replicate 4

text: Treated

text: University of Lodz

text: live

text: Microbe, viral or environmental

text: Poland: Lodz

text: Trichophyton rubrum CBS 118892

text: total RNA

text: CBS 118892

text: Trichophyton rubrum CBS 118892 treated


text: Housheng Hansen He, Princess Margaret Cancer Centre, UNIV HEALTH NETWORK

text: live

text: Generic

characteristic: cell line

text: Prostate cancer

characteristic: cell type

text: anti-CTCF, ab70303

characteristic: chip antibody

text: Control sgRNA

characteristic: genotype

text: Homo sapiens

text: 22Rv1 cells

text: Full FBS medium

characteristic: treatment


characteristic: INSDC secondary accession

text: live

text: Generic

text: Prostate cancer

text: anti-CTCF, ab70303

text: Knockout of the -10Kb CTCF binding site

text: Homo sapiens

text: 22Rv1 cells

text: Full FBS medium


text: live

text: Generic

characteristic: SRA accession

text: Prostate cancer

text: anti-H3K27ac, ab4729

text: Control sgRNA

text: Homo sapiens

text: 22Rv1 cells

text: Full FBS medium


text: live

text: Generic

text: Prostate cancer

text: anti-H3K27ac, ab4729

text: Knockout of the -10Kb CTCF binding site

text: Homo sapiens

text: 22Rv1 cells

text: Full FBS medium


text: live

text: Generic

text: Prostate cancer

text: anti-H3K27ac, ab4729

text: Wild type

text: Homo sapiens

text: V16A cells

text: Full FBS medium


text: live

text: Generic

text: Prostate cancer

text: anti-H3K27ac, ab4729

text: Wild type

text: Homo sapiens

text: 22Rv1 cells

text: Full FBS medium


text: live

text: Generic

text: VCaP

text: Prostate cancer

text: anti-AR, 108341

text: Wild type

text: Homo sapiens

text: VCaP cells

text: DHT stimulation for 24hr


text: live

text: Generic

text: VCaP

text: Prostate cancer

text: anti-AR, 108341

text: Wild type

text: Homo sapiens

text: VCaP cells

text: DHT stimulation for 2hr


text: live

text: Generic

text: VCaP

text: Prostate cancer

text: anti-AR, 108341

text: Wild type

text: Homo sapiens

text: VCaP cells

text: Androgen starvation


text: live

text: Generic

text: VCaP

text: Prostate cancer

text: anti-CTCF, ab70303

text: Wild type

text: Homo sapiens

text: VCaP cells

text: DHT stimulation for 24hr


text: live

text: Generic

text: VCaP

text: Prostate cancer

text: anti-CTCF, ab70303

text: Wild type

text: Homo sapiens

text: VCaP cells

text: Androgen starvation


text: live

text: Generic

text: VCaP

text: Prostate cancer

text: anti-H3K27ac, ab4729

text: Wild type

text: Homo sapiens

text: VCaP cells

text: DHT stimulation for 24hr


text: live

text: Generic

text: VCaP

text: Prostate cancer

text: anti-H3K27ac, ab4729

text: Wild type

text: Homo sapiens

text: VCaP cells

text: DHT stimulation for 2hr


text: live

text: Generic

text: VCaP

text: Prostate cancer

text: anti-H3K27ac, ab4729

text: Wild type

text: Homo sapiens

text: VCaP cells

text: Androgen starvation


text: Laboratory of Neuropathology and Neuroscience, Pharmaceutical Sciences, The University of Tokyo

text: live

text: Generic

text: 9-10 months

characteristic: age

text: microglia

text: NLGF

text: Mus musculus

text: microglia

characteristic: strain

text: Brain

characteristic: tissue


characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: 9-10 months

text: microglia

text: Inpp5d+/-; NLGF

text: Mus musculus

text: microglia

text: Brain


characteristic: External Id

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 9-10 months

text: microglia

text: Tyrobp-/-; Inpp5d+/-; NLGF

text: Mus musculus

text: microglia

text: Brain


characteristic: INSDC center name

text: live

text: Generic

text: 9-10 months

text: microglia

text: Tyrobp-/-; NLGF

text: Mus musculus

characteristic: organism

text: microglia

text: Brain

characteristic: title


name: A new bacterial species (Devosia litorisediminis) isolated from a sand dune

text: Sungkyunkwan University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: South Korea: Boryeong

characteristic: geo loc name

text: sand dune

characteristic: isolation source

text: Devosia litorisediminis

text: Pure bacterial culture

characteristic: sample type

text: Microbe sample from Devosia sp.

text: type strain of Devosia litorisediminis

characteristic: type-material


text: Cancer and Inflammation, Barts Cancer Institute, Queen Mary University of London

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: CD34+ hematopoietic stem/progenitor cells (HSPCs)

characteristic: cell type

text: Normoxia

characteristic: culture

text: myelodysplastic syndromes

characteristic: disease state

characteristic: donor

characteristic: mutation state

text: Homo sapiens

characteristic: other sample name


characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Hypoxia

text: healthy

text: healthy

text: Homo sapiens


characteristic: INSDC center name

text: live

text: Generic

text: Hypoxia

text: myelodysplastic syndromes

text: Homo sapiens

characteristic: organism

characteristic: title


characteristic: INSDC secondary accession

text: live

text: Generic

text: Normoxia

text: healthy

text: healthy

text: Homo sapiens


text: Sichuan Agricultural University

text: live

text: Generic

characteristic: SRA accession

text: 28 days old

characteristic: age

text: Columba livia

text: breast muscle

text: White-King pigeon

characteristic: strain

text: breast muscle

characteristic: tissue


text: Sichuan Agricultural University

text: live

text: Generic

text: 14 days old

text: Columba livia

text: breast muscle

text: White-King pigeon

text: breast muscle


text: Sichuan Agricultural University

text: live

text: Generic

text: 1 day old

text: Columba livia

text: breast muscle

text: White-King pigeon

text: breast muscle


text: Sichuan Agricultural University

text: live

text: Generic

text: 2 years old

text: Columba livia

text: breast muscle

text: White-King pigeon

text: breast muscle


text: University of Sheffield

text: live

text: Pathogen.cl

text: MRCG

text: Gambia

text: Homo sapiens

characteristic: host

text: healthy

characteristic: isolate

text: rectovaginal swab

text: 13.4432 N 15.3101 W

text: Staphylococcus aureus


text: University of Sheffield

text: live

text: Pathogen.cl

text: MRCG

text: Gambia

text: Homo sapiens

text: diseased

text: blood

text: 13.4432 N 15.3101 W

text: Staphylococcus aureus


text: University of Sheffield

text: live

text: Pathogen.cl

text: MRCG

text: Gambia

text: Homo sapiens

text: healthy

text: rectovaginal swab

text: 13.4432 N 15.3101 W

text: Klebsiella pneumoniae


text: University of Sheffield

text: live

text: Pathogen.cl

text: MRCG

text: Gambia

text: Homo sapiens

text: diseased

text: blood

text: 13.4432 N 15.3101 W

text: Klebsiella pneumoniae


text: University of Sheffield

text: live

text: Pathogen.cl

text: MRCG

text: Gambia

text: Homo sapiens

text: healthy

text: rectovaginal swab

text: 13.4432 N 15.3101 W

text: Escherichia coli


text: University of Sheffield

text: live

text: Pathogen.cl

text: MRCG

text: Gambia

text: Homo sapiens

text: diseased

text: blood

text: 13.4432 N 15.3101 W

text: Escherichia coli


text: University of Sheffield

text: live

text: Pathogen.cl

text: MRCG

text: Gambia

text: Homo sapiens

text: healthy

text: rectovaginal swab

text: 13.4432 N 15.3101 W

text: Enterococcus faecalis


text: University of Sheffield

text: live

text: Pathogen.cl

text: MRCG

text: Gambia

text: Homo sapiens

text: diseased

text: blood

text: 13.4432 N 15.3101 W

text: Enterococcus faecalis


text: Pediatric Hematology and Oncology, Hannover Medical School

text: live

text: Generic

text: H3K27me3, Millipore #07-449

characteristic: chip antibody

text: Mus musculus

text: Murine whole bone marrow

text: Whole bone marrow

text: BRSST+sgLuc H3K27me3

text: BRSST+sgLuc

characteristic: treatment


characteristic: External Id

characteristic: INSDC first public

text: live

text: Generic

text: H3K27me3, Millipore #07-449

text: Mus musculus

text: Murine whole bone marrow

text: Whole bone marrow

text: BRSST+sgEzh2 H3K27me3


characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: H3K4me3, Millipore #04-745

text: Mus musculus

text: Murine whole bone marrow

text: Whole bone marrow

text: BRSST+sgLuc H3K4me3

text: BRSST+sgLuc


text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: H3K4me3, Millipore #04-745

text: Mus musculus

text: Murine whole bone marrow

text: Whole bone marrow

text: BRSST+sgEzh2 H3K4me3


characteristic: INSDC center name

text: live

text: Generic

text: Mus musculus

characteristic: organism

text: Murine whole bone marrow

text: Whole bone marrow

text: BRSST+sgLuc 1% input

text: BRSST+sgLuc


characteristic: INSDC secondary accession

text: live

text: Generic

text: Mus musculus

text: Murine whole bone marrow

text: Whole bone marrow

text: BRSST+sgEzh2 1% input

characteristic: title


Magnetospirillum sulfuroxidans J10

text: SciBear LLC

text: live

text: Microbe, viral or environmental

text: TU Delft

characteristic: biomaterial provider

text: Jeanine S. Geelhoed

characteristic: collected by

characteristic: collection date

characteristic: culture collection

text: Netherlands: Delft

characteristic: geo loc name

text: Jeanine S. Geelhoed

characteristic: identified by

text: freshwater sediment

characteristic: isolation source

text: Magnetospirillum sulfuroxidans

text: pure culture

characteristic: sample type

text: Microbe sample from Magnetospirillum sulfuroxidans

text: type strain of Magnetospirillum sulfuroxidans

characteristic: type-material


characteristic: External Id

text: Universidad Catolica del Norte

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIMAG.sediment

text: 5 cm

characteristic: depth

text: This BioSample is a metagenomic assembly obtained from the metagenome of BioSample: SAMN12819363

characteristic: derived-from

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: description

characteristic: elev

characteristic: environmental sample

text: Chile: Tarapaca Salar de Huasco

characteristic: isolate

text: shallow sediments of the Salar de Huasco lagoon

text: 20.310278 S 68.878333 W

characteristic: lat lon

text: sediment metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Gemmatimonadota bacterium

text: metagenomic assembly

characteristic: sample-type

text: MIMAG Metagenome-assembled Genome sample from Gemmatimonadota bacterium


text: Universidad Catolica del Norte

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: MIMAG.sediment

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: 5 cm

text: Keywords: GSC:MIxS;MIMAG:6.0

text: Chile: Tarapaca Salar de Huasco

characteristic: geo loc name

text: 20.310278 S 68.878333 W

text: sediment metagenome

text: Bacteroidota bacterium

characteristic: organism

text: metagenomic assembly

text: MIMAG Metagenome-assembled Genome sample from Bacteroidota bacterium

characteristic: title


characteristic: External Id

text: Pediatrics, Penn State University College of Medicine

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: female

characteristic: Sex

text: 6 hours

characteristic: exposure time

text: Mus musculus

text: Femaale mouse exposed to bacteria +SP-A2 (1A0) protein and Aleveolar Macrophage (AM) cells isolated after 6 h

characteristic: strain


text: live

text: Generic

text: male

text: 6 hours

text: Mus musculus

text: Male mouse exposed to bacteria +SP-A2 (1A0) protein and Aleveolar Macrophage (AM) cells isolated after 6 h


text: live

text: Generic

text: female

text: 6 hours

text: Mus musculus

text: Female mouse exposed to bacteria and Aleveolar Macrophage (AM) cells isolated after 6 h


text: live

text: Generic

text: male

text: 6 hours

text: Mus musculus

text: Male mouse exposed to bacteria and Aleveolar Macrophage (AM) cells isolated after 6 h


ATCC 55366

text: UNIST

text: live

text: Microbe, viral or environmental

text: Japan

text: Oil-contaminated soil

text: Methylorubrum extorquens

text: cell culture

text: ATCC 55366

text: Microbe sample from Methylorubrum extorquens


Burkholderia cepacia ZJ1

text: Beibu Gulf University

text: live

text: Microbe, viral or environmental

text: China:Shiwanda Mountain in Guangxi Province

text: Plectrocnemia

characteristic: host

text: Intestinal tract

text: Burkholderia cepacia

text: Thallus

text: Microbe sample from Burkholderia cepacia


text: BioPS Co., Ltd.

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: South Korea: Jeju

text: Tenebrio molitor

text: larvae of insect

characteristic: isolation source

text: Microbacterium tenebrionis

text: cell culture

characteristic: sample type

text: Microbe sample from Microbacterium tenebrionis

text: type strain of Microbacterium tenebrionis

characteristic: type-material


text: BioPS Co., Ltd.

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: South Korea: Jeju

text: Trypoxylus dichotomus

text: larvae of insect

text: Microbacterium allomyrinae

text: cell culture

text: Microbe sample from Microbacterium allomyrinae

text: type strain of Microbacterium allomyrinae


characteristic: External Id

text: Yellow Sea Fisheries Research Institute

text: live

text: Microbe, viral or environmental

text: China: Changdao, Yantai, Shandong

text: fish

text: Photobacterium damselae

characteristic: organism

text: whole organism

text: Microbe sample from Photobacterium damselae

characteristic: title


text: Sun Yat-sen University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: China: Tengchong county, Yunnan, DRTY-8 pool

text: hot spring sediment

text: 24.95 N 98.44 E

text: hot springs metagenome

text: Metagenome or environmental sample from hot springs metagenome


text: Sun Yat-sen University

text: live

text: Metagenome or environmental

text: China: DaGeJia village, AngRen county, Tibet Plateau, DGJ8 pool

text: hot spring sediment

text: 29.60 N 85.75 E

text: hot springs metagenome


text: Sun Yat-sen University

text: live

text: Metagenome or environmental

text: China: DaGeJia village, AngRen county, Tibet Plateau, DGJ10 pool

text: hot spring sediment

text: 29.60 N 85.75 E

text: hot springs metagenome


text: Sun Yat-sen University

text: live

text: Metagenome or environmental

text: China: QuZhuoMu village, CuoNa county,Tibet Plateau, QZM_A1 pool

text: hot spring sediment

text: 28.25 N 91.81 E

text: hot springs metagenome


text: Sun Yat-sen University

text: live

text: Metagenome or environmental

text: China: QuZhuoMu village, CuoNa county,Tibet Plateau, QZM_A2_3 pool

text: hot spring sediment

text: 28.25 N 91.81 E

text: hot springs metagenome


text: Sun Yat-sen University

text: live

text: Metagenome or environmental

text: China: QuZhuoMu village, CuoNa county,Tibet Plateau, QZM_B1 pool

text: hot spring sediment

text: 28.25 N 91.81 E

text: hot springs metagenome


text: Sun Yat-sen University

text: live

text: Metagenome or environmental

text: China: QuZhuoMu village, CuoNa county,Tibet Plateau, QZM_B4 pool

text: hot spring sediment

text: 28.25 N 91.81 E

text: hot springs metagenome


text: Center for Reproductive Medicine, Cheeloo College of Medicine, Shandong University

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

characteristic: age

characteristic: body mass index

text: Homo sapiens

characteristic: plasma basic luteinizing hormone

text: ovarian granulosa cells


text: Deepak Srivastava, Gladstone Institutes

characteristic: INSDC center name

text: live

text: Generic

characteristic: cell line

text: d7 hiPSC-derived cardiac progenitor cells

characteristic: cell type

text: Homo sapiens

text: Cardiac progenitor cells

characteristic: treatment


text: Deepak Srivastava, Gladstone Institutes

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Homo sapiens

text: Cardiac progenitor cells

text: siNC control


text: Deepak Srivastava, Gladstone Institutes

text: live

text: Generic

characteristic: NCBI submission package

text: Homo sapiens

text: Cardiac progenitor cells

text: Input


characteristic: External Id

text: University of Malta

text: live

text: Generic

text: Treg

text: control

characteristic: group

characteristic: mouse strain

text: Mus musculus

text: Treg cells

text: lymph node

characteristic: tissue


text: University of Malta

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Treg

text: FTH deficient

text: Mus musculus

characteristic: organism

text: Treg cells

text: lymph node

characteristic: title


text: Hakem Lab, Princess Margaret Cancer Centre, University Health Network

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: MDA MB 436

text: anti-RNAPII CTD pSer2 (Abcam cat: ab5095)

characteristic: chip antibody

text: MEPCE-KD

characteristic: condition

text: Homo sapiens

text: MDA MB 436

text: Pol II pSer2 - shMEPCE


characteristic: INSDC center name

text: live

text: Generic

text: MDA MB 436

characteristic: cell line

text: WT

text: Homo sapiens

text: MDA MB 436

text: Pol II pSer2 - shScr


text: live

characteristic: INSDC status

text: Generic

text: MDA MB 436

text: anti-RNAPII CTD pSer5 (Abcam cat: ab5131)

text: MEPCE-KD

text: Homo sapiens

text: MDA MB 436

text: Total Pol II - shMEPCE


text: live

text: Generic

characteristic: NCBI submission model

text: MDA MB 436

text: WT

text: Homo sapiens

text: MDA MB 436

text: Total Pol II - shScr


T-T IS1

text: beijinglianhedaxue

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: collection date

text: China

characteristic: geo loc name

text: bactrrium

characteristic: isolate

text: stool

characteristic: isolation source

text: Bacillota

text: biological replicate1

characteristic: replicate

text: stool

characteristic: sample type

text: Microbe sample from Bacillota


T-T IS2

characteristic: External Id

text: beijinglianhedaxue

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: China

text: bactrrium

text: stool

text: Bacillota

characteristic: organism

text: biological replicate2

text: stool

text: Microbe sample from Bacillota


T-T IS3

text: beijinglianhedaxue

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: China

text: bactrrium

text: stool

text: Bacillota

text: biological replicate3

text: stool

text: Microbe sample from Bacillota

characteristic: title


T-T IS4

text: beijinglianhedaxue

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: China

text: bactrrium

text: stool

text: Bacillota

text: biological replicate4

text: stool

text: Microbe sample from Bacillota


T-T IS5

text: beijinglianhedaxue

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: China

text: bactrrium

text: stool

text: Bacillota

text: biological replicate5

text: stool

text: Microbe sample from Bacillota


T-T NC1

text: beijinglianhedaxue

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: China

text: bactrrium

text: stool

text: Bacillota

text: biological replicate6

text: stool

text: Microbe sample from Bacillota


T-T NC2

text: beijinglianhedaxue

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: China

text: bactrrium

text: stool

text: Bacillota

text: biological replicate7

text: stool

text: Microbe sample from Bacillota


T-T NC3

text: beijinglianhedaxue

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: China

text: bactrrium

text: stool

text: Bacillota

text: biological replicate8

text: stool

text: Microbe sample from Bacillota


T-T NC4

text: beijinglianhedaxue

text: live

text: Microbe, viral or environmental

text: China

characteristic: geo loc name

text: bactrrium

text: stool

text: Bacillota

text: biological replicate9

text: stool

text: Microbe sample from Bacillota


T-T NC5

text: beijinglianhedaxue

text: live

text: Microbe, viral or environmental

text: China

text: bactrrium

characteristic: isolate

text: stool

text: Bacillota

text: biological replicate10

text: stool

text: Microbe sample from Bacillota


T-T LDG1

text: beijinglianhedaxue

text: live

text: Microbe, viral or environmental

text: China

text: bactrrium

text: stool

characteristic: isolation source

text: Bacillota

text: biological replicate11

text: stool

text: Microbe sample from Bacillota


T-T LDG2

text: beijinglianhedaxue

text: live

text: Microbe, viral or environmental

text: China

text: bactrrium

text: stool

text: Bacillota

text: biological replicate12

characteristic: replicate

text: stool

text: Microbe sample from Bacillota


T-T LDG3

text: beijinglianhedaxue

text: live

text: Microbe, viral or environmental

text: China

text: bactrrium

text: stool

text: Bacillota

text: biological replicate13

text: stool

characteristic: sample type

text: Microbe sample from Bacillota


T-T LDG4

characteristic: External Id

text: beijinglianhedaxue

text: live

text: Microbe, viral or environmental

text: China

text: bactrrium

text: stool

text: Bacillota

text: biological replicate14

text: stool

text: Microbe sample from Bacillota


T-T LDG5

text: beijinglianhedaxue

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: China

text: bactrrium

text: stool

text: Bacillota

text: biological replicate15

text: stool

text: Microbe sample from Bacillota


T-T MDG1

text: beijinglianhedaxue

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: China

text: bactrrium

text: stool

text: Bacillota

text: biological replicate16

text: stool

text: Microbe sample from Bacillota


T-T MDG2

text: beijinglianhedaxue

text: live

text: Microbe, viral or environmental

text: China

text: bactrrium

text: stool

text: Bacillota

characteristic: organism

text: biological replicate17

text: stool

text: Microbe sample from Bacillota


T-T MDG3

text: beijinglianhedaxue

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

text: China

text: bactrrium

text: stool

text: Bacillota

text: biological replicate18

text: stool

text: Microbe sample from Bacillota


T-T MDG4

text: beijinglianhedaxue

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: China

text: bactrrium

text: stool

text: Bacillota

text: biological replicate19

text: stool

text: Microbe sample from Bacillota


T-T MDG5

text: beijinglianhedaxue

text: live

text: Microbe, viral or environmental

text: China

text: bactrrium

text: stool

text: Bacillota

text: biological replicate20

text: stool

text: Microbe sample from Bacillota

characteristic: title


T-T HDG1

text: beijinglianhedaxue

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: China

text: bactrrium

text: stool

text: Bacillota

text: biological replicate21

text: stool

text: Microbe sample from Bacillota


T-T HDG2

text: beijinglianhedaxue

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: China

text: bactrrium

text: stool

text: Bacillota

text: biological replicate22

text: stool

text: Microbe sample from Bacillota


T-T HDG3

text: beijinglianhedaxue

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: China

text: bactrrium

text: stool

text: Bacillota

text: biological replicate23

text: stool

text: Microbe sample from Bacillota


T-T HDG4

text: beijinglianhedaxue

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: China

text: bactrrium

text: stool

text: Bacillota

text: biological replicate24

text: stool

text: Microbe sample from Bacillota


T-T HDG5

text: beijinglianhedaxue

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: China

text: bactrrium

text: stool

text: Bacillota

text: biological replicate25

text: stool

text: Microbe sample from Bacillota


Erythroxylum domingense

text: Iridian Genomes

text: live

text: Plant

text: Dawson White

characteristic: biomaterial provider

text: Erythroxylum domingense

characteristic: description

text: adult

characteristic: dev stage

text: Dominican Republic

characteristic: geo loc name

text: KHD 71234

text: Erythroxylum domingense

characteristic: specimen voucher

text: leaf

characteristic: tissue

text: Plant sample from Erythroxylum domingense


characteristic: External Id

text: Anhui University of Science & Technology

characteristic: INSDC first public

text: live

text: MIMAG

text: This BioSample is a metagenomic assembly obtained from the coal metagenome BioSample: SAMN19842623

characteristic: derived-from

text: Keywords: GSC:MIxS;MIMAG:6.0

text: coal biome

text: Deep coal reservoir

text: environmental material

characteristic: environmental sample

text: China: Huainan

characteristic: isolate

text: coal samples cultured in anaerobic conditions in minimal salts plus yeast media

characteristic: isolation source

text: 32.77 N 116.48 E

characteristic: lat lon

text: coal metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Bacillus sp. (in: firmicutes)

text: metagenomic assembly

characteristic: sample-type

text: MIMAG Metagenome-assembled Genome sample from Bacillus sp. (in: firmicutes)


Amazona viridigenalis

text: Iridian Genomes

characteristic: INSDC center name

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Taylor Hains

text: Amazona viridigenalis

text: adult

text: IRGN 3Q3QPEHY2G

text: Amazona viridigenalis

characteristic: organism

text: not determined

characteristic: sex

text: feather shaft pulp

text: Model organism or animal sample from Amazona viridigenalis

characteristic: title


Platycercus adscitus

characteristic: External Id

text: Iridian Genomes

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

characteristic: SRA accession

text: Taylor Hains

text: Platycercus adscitus

characteristic: description

text: adult

characteristic: dev stage

text: IRGN H84CDEQLPX

text: Platycercus adscitus

text: not determined

characteristic: specimen voucher

text: feather shaft pulp

characteristic: tissue

text: Model organism or animal sample from Platycercus adscitus


Platycercus elegans

text: Iridian Genomes

text: live

text: Model organism or animal

text: Taylor Hains

text: Platycercus elegans

text: adult

text: IRGN 1YHI2YNL6N

characteristic: isolate

text: Platycercus elegans

text: not determined

text: feather shaft pulp

text: Model organism or animal sample from Platycercus elegans


Psittacula derbiana

text: Iridian Genomes

characteristic: INSDC center name

text: live

text: Model organism or animal

text: Taylor Hains

text: Psittacula derbiana

text: adult

text: FMNH 68005

text: Psittacula derbiana

text: not determined

text: feather shaft pulp

text: Model organism or animal sample from Psittacula derbiana


Lorius chlorocercus

text: Iridian Genomes

characteristic: INSDC last update

text: live

text: Model organism or animal

text: Taylor Hains

text: Lorius chlorocercus

text: adult

text: IRGN MI9WGLHNDS

text: Lorius chlorocercus

text: not determined

text: feather shaft pulp

text: Model organism or animal sample from Lorius chlorocercus


Ara severus

text: Iridian Genomes

text: live

characteristic: INSDC status

text: Model organism or animal

text: Taylor Hains

text: Ara severus

text: adult

text: IRGN N55JZEULF6

text: Ara severus

text: not determined

text: feather shaft pulp

text: Model organism or animal sample from Ara severus


Pionites leucogaster

text: Iridian Genomes

text: live

text: Model organism or animal

characteristic: NCBI submission model

text: Taylor Hains

text: Pionites leucogaster

text: adult

text: IRGN 1JVFNH76EG

text: Pionites leucogaster

text: not determined

text: feather shaft pulp

text: Model organism or animal sample from Pionites leucogaster


Barnardius zonarius

text: Iridian Genomes

text: live

text: Model organism or animal

characteristic: NCBI submission package

text: Taylor Hains

text: Barnardius zonarius

text: adult

text: IRGN E2RLKO3T3F

text: Barnardius zonarius

text: not determined

text: feather shaft pulp

text: Model organism or animal sample from Barnardius zonarius


Amazona oratrix

text: Iridian Genomes

text: live

text: Model organism or animal

text: Taylor Hains

text: adult

text: FMNH 106309

text: Amazona oratrix

characteristic: organism

text: not determined

text: feather shaft pulp

text: Model organism or animal sample from Amazona oratrix


Amazona autumnalis

text: Iridian Genomes

text: live

text: Model organism or animal

text: Taylor Hains

text: Amazona autumnalis

text: adult

text: IRGN HJ6MFZFI5Z

text: Amazona autumnalis

text: not determined

characteristic: sex

text: feather shaft pulp

text: Model organism or animal sample from Amazona autumnalis


Cyanoliseus patagonus

text: Iridian Genomes

text: live

text: Model organism or animal

text: Taylor Hains

text: Cyanoliseus patagonus

text: adult

text: IRGN NJKN8KX361

text: Cyanoliseus patagonus

text: not determined

text: feather shaft pulp

text: Model organism or animal sample from Cyanoliseus patagonus

characteristic: title


Pionites melanocephalus

characteristic: External Id

text: Iridian Genomes

text: live

text: Model organism or animal

text: Taylor Hains

text: Pionites melanocephalus

text: adult

text: IRGN 6IWZNKOSS6

text: Pionites melanocephalus

text: not determined

text: feather shaft pulp

text: Model organism or animal sample from Pionites melanocephalus


Psilopsiagon aymara

text: Iridian Genomes

characteristic: INSDC first public

text: live

text: Model organism or animal

text: Taylor Hains

text: Psilopsiagon aymara

text: adult

text: IRGN K6SHJZ2KDV

text: Psilopsiagon aymara

text: not determined

text: feather shaft pulp

text: Model organism or animal sample from Psilopsiagon aymara


Psephotus haematonotus

text: Iridian Genomes

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

text: adult

text: IRGN NXWXB9NBMU

text: Psephotus haematonotus

text: not determined

text: feather shaft pulp

text: Model organism or animal sample from Psephotus haematonotus


Ara macao

text: Iridian Genomes

text: live

text: Model organism or animal

text: Taylor Hains

text: Ara macao

text: adult

text: IRGN FNXBSXKTYP

text: Ara macao

text: not determined

text: IRGN:FNXBSXKTYP

text: feather shaft pulp

text: Model organism or animal sample from Ara macao


Cacatua moluccensis

text: Iridian Genomes

text: live

text: Model organism or animal

characteristic: SRA accession

text: Taylor Hains

text: Cacatua moluccensis

text: adult

text: IRGN 39GUCMVTB3

text: Cacatua moluccensis

text: female

text: feather shaft pulp

text: Model organism or animal sample from Cacatua moluccensis


text: Zhejiang University

text: live

text: Metagenome or environmental

text: China: Zhejiang

text: Homo sapiens

characteristic: host

text: fecal sample

text: human gut metagenome

text: Human fecal

characteristic: tmp


Triclaria malachitacea

text: Iridian Genomes

text: live

text: Model organism or animal

text: Taylor Hains

text: Triclaria malachitacea

characteristic: description

text: adult

characteristic: dev stage

text: IRGN 687U3GJ1KC

text: Triclaria malachitacea

text: not determined

characteristic: specimen voucher

text: feather shaft pulp

text: Model organism or animal sample from Triclaria malachitacea


Melopsittacus undulatus

text: Iridian Genomes

characteristic: INSDC center name

text: live

text: Model organism or animal

text: Taylor Hains

text: Melopsittacus undulatus

text: adult

text: IRGN 88WSNYN1X7

characteristic: isolate

text: Melopsittacus undulatus

text: not determined

text: feather shaft pulp

characteristic: tissue

text: Model organism or animal sample from Melopsittacus undulatus


Cacatua alba

text: Iridian Genomes

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

text: Taylor Hains

text: Cacatua alba

text: adult

text: IRGN DL64GI8PRG

text: Cacatua alba

text: not determined

text: feather shaft pulp

text: Model organism or animal sample from Cacatua alba


text: Shandong University

text: live

text: Generic

characteristic: NCBI submission package

text: pancreas beta cell line Min6

characteristic: cell line

text: Mus musculus

characteristic: organism

text: Thada-activated

characteristic: treatment


characteristic: External Id

text: Shandong University

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Generic

text: pancreas beta cell line Min6

text: Mus musculus

characteristic: title

text: control


text: 179b, Plant Development, CBGP-INIA-UPM

text: live

text: Generic

characteristic: SRA accession

text: Duplo

characteristic: genotype

text: Brassica napus

text: Duplo_29ºC_root tips

text: root tips (1 cm)

text: 7 days at 29ºC


text: 179b, Plant Development, CBGP-INIA-UPM

text: live

text: Generic

text: Duplo

text: Brassica napus

text: Duplo_21ºC_root tips

text: root tips (1 cm)

text: 7 days at 21ºC


text: 179b, Plant Development, CBGP-INIA-UPM

text: live

text: Generic

text: Drakkar

text: Brassica napus

text: Drakkar_29ºC_root tips

text: root tips (1 cm)

text: 7 days at 29ºC


text: 179b, Plant Development, CBGP-INIA-UPM

text: live

text: Generic

text: Drakkar

text: Brassica napus

text: Drakkar_21ºC_root tips

text: root tips (1 cm)

text: 7 days at 21ºC


Zea mays B73.1

text: Brigham Young University

text: live

text: Plant

characteristic: cultivar

text: RNA-seq of laser-captured ear bract primordia, Hiseq 2500, 125bp single-end reads. Raw data

characteristic: description

text: early reproductive stage

text: wildtype B73

text: USA:Utah

text: Zea mays

text: biological replicate 1

characteristic: replicates

text: ear bract primordium


Zea mays B73.2

text: Brigham Young University

characteristic: INSDC center name

text: live

text: Plant

text: early reproductive stage

text: wildtype B73

text: USA:Utah

text: Zea mays

text: biological replicate 2

text: ear bract primordium

characteristic: tissue


Zea mays B73.3

text: Brigham Young University

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Plant

text: early reproductive stage

text: wildtype B73

text: USA:Utah

text: Zea mays

text: biological replicate 3

text: ear bract primordium


Zea mays tsh1.1

text: Brigham Young University

text: live

text: Plant

characteristic: NCBI submission model

characteristic: NCBI submission package

text: early reproductive stage

text: USA:Utah

text: Zea mays

text: biological replicate 1

text: ear bract primordium


Zea mays tsh1.2

text: Brigham Young University

text: live

text: Plant

text: early reproductive stage

text: USA:Utah

text: Zea mays

characteristic: organism

text: biological replicate 2

text: ear bract primordium


Zea mays tsh1.3

text: Brigham Young University

text: live

text: Plant

text: early reproductive stage

text: USA:Utah

text: Zea mays

text: biological replicate 3

text: ear bract primordium


Zea mays tsh4.1

text: Brigham Young University

text: live

text: Plant

text: early reproductive stage

text: USA:Utah

text: Zea mays

text: biological replicate 1

text: ear bract primordium


Zea mays tsh4.2

text: Brigham Young University

text: live

text: Plant

text: early reproductive stage

text: USA:Utah

text: Zea mays

text: biological replicate 2

text: ear bract primordium


Zea mays tsh4.3

text: Brigham Young University

text: live

text: Plant

text: early reproductive stage

text: USA:Utah

text: Zea mays

text: biological replicate 3

text: ear bract primordium


Zea mays DM.1

text: Brigham Young University

text: live

text: Plant

text: early reproductive stage

text: USA:Utah

text: Zea mays

text: biological replicate 1

text: ear bract primordium


Zea mays DM.2

text: Brigham Young University

text: live

text: Plant

text: early reproductive stage

text: USA:Utah

text: Zea mays

text: biological replicate 2

text: ear bract primordium


Zea mays DM.3

text: Brigham Young University

text: live

text: Plant

text: early reproductive stage

text: USA:Utah

text: Zea mays

text: biological replicate 3

text: ear bract primordium


text: Brigham Young University

text: live

text: Plant

text: early reproductive stage

text: wildtype B73

text: USA:Utah

text: Zea mays

text: biological replicate 1

text: ear bract primordium


text: Brigham Young University

text: live

text: Plant

text: early reproductive stage

text: wildtype B73

text: USA:Utah

text: Zea mays

text: biological replicate 2

text: ear bract primordium


text: Brigham Young University

text: live

text: Plant

text: early reproductive stage

text: wildtype B73

text: USA:Utah

text: Zea mays

text: biological replicate 3

text: ear bract primordium


text: Brigham Young University

text: live

text: Plant

text: early reproductive stage

text: USA:Utah

text: Zea mays

text: biological replicate 1

text: ear bract primordium


text: Brigham Young University

text: live

text: Plant

text: early reproductive stage

text: USA:Utah

text: Zea mays

text: biological replicate 2

text: ear bract primordium


text: Brigham Young University

text: live

text: Plant

text: early reproductive stage

text: USA:Utah

text: Zea mays

text: biological replicate 3

text: ear bract primordium


text: Colorado State University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: This biosample is a metagenomic assembly obtained from the freshwater sediment metagenome Biosample: SAMN16330883

characteristic: derived-from

characteristic: environmental sample

text: USA:Washington, Columbia River

characteristic: geo loc name

characteristic: id

characteristic: isolate

text: river sediment

characteristic: isolation source

text: 46.372775 N 119.271925 W

characteristic: lat lon

text: freshwater sediment metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Acidobacteriota bacterium

text: metagenomic assembly

characteristic: sample-type

text: Microbe sample from Acidobacteriota bacterium


characteristic: External Id

text: Colorado State University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: This biosample is a metagenomic assembly obtained from the metagenome Biosample: SAMN06267121

text: USA:Columbia River, Washington, USA

text: river sediment

text: 46.3720 N 119.272 W

text: groundwater metagenome

text: Pseudomonadota bacterium

text: metagenomic assembly

text: Microbe sample from Pseudomonadota bacterium

characteristic: title


text: Colorado State University

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: This biosample is a metagenomic assembly obtained from the metagenome Biosample: SAMN06267128

text: USA:Columbia River, Washington, USA

text: river sediment

text: 46.3720 N 119.272 W

text: groundwater metagenome

text: Armatimonadota bacterium

text: metagenomic assembly

text: Microbe sample from Armatimonadota bacterium


text: Colorado State University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: This biosample is a metagenomic assembly obtained from the metagenome Biosample: SAMN06267116

characteristic: derived-from

characteristic: environmental sample

text: USA:Columbia River, Washington, USA

text: river sediment

text: 46.3720 N 119.272 W

text: groundwater metagenome

text: Armatimonadota bacterium

characteristic: organism

text: metagenomic assembly


text: Colorado State University

text: live

text: Microbe, viral or environmental

text: This biosample is a metagenomic assembly obtained from the metagenome Biosample: SAMN16330879

text: USA:Washington

characteristic: geo loc name

characteristic: isolate

text: river sediment

characteristic: isolation source

text: 46.372775 N 119.271925 W

text: freshwater sediment metagenome

text: Nitrospirota bacterium

text: metagenomic assembly

text: Microbe sample from Nitrospirota bacterium


text: Colorado State University

text: live

text: Microbe, viral or environmental

text: This biosample is a metagenomic assembly obtained from the metagenome Biosample: SAMN16330880

text: USA:Washington

text: river sediment

text: 46.372775 N 119.271925 W

characteristic: lat lon

text: freshwater sediment metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Nitrospirota bacterium

text: metagenomic assembly


characteristic: External Id

text: Colorado State University

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: This biosample is a metagenomic assembly obtained from the metagenome Biosample: SAMN06267139

text: USA:Columbia River, Washington, USA

text: river sediment

text: 46.3720 N 119.272 W

text: groundwater metagenome

text: Nitrospirota bacterium

text: metagenomic assembly

characteristic: sample-type


text: Colorado State University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the freshwater sediment metagenome BioSample: SAMN16330884

text: USA:Columbia River, Washington, USA

text: river sediment

text: 46.372775 N 119.271925 W

text: freshwater sediment metagenome

text: Nitrospirota bacterium

text: metagenomic assembly

characteristic: title


text: Colorado State University

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: This biosample is a metagenomic assembly obtained from the metagenome Biosample: SAMN06267137

text: USA:Columbia River, Washington, USA

text: river sediment

text: 46.3720 N 119.272 W

text: groundwater metagenome

text: Nitrospirota bacterium

text: metagenomic assembly


text: Colorado State University

text: live

text: Microbe, viral or environmental

characteristic: collection date

characteristic: derived-from

characteristic: environmental sample

text: USA:Columbia River, Washington, USA

characteristic: id

text: river sediment

text: 46.3720 N 119.272 W

text: freshwater sediment metagenome

text: Nitrospirota bacterium

text: metagenomic assembly


text: Colorado State University

text: live

text: Microbe, viral or environmental

text: This biosample is a metagenomic assembly obtained from the freshwater sediment metagenome Biosample: SAMN06267135

text: USA:Columbia River, Washington, USA

characteristic: geo loc name

characteristic: isolate

text: river sediment

characteristic: isolation source

text: 46.3720 N 119.272 W

text: freshwater sediment metagenome

text: Nitrospirota bacterium

characteristic: organism

text: metagenomic assembly


characteristic: External Id

text: Colorado State University

text: live

text: Microbe, viral or environmental

text: This biosample is a metagenomic assembly obtained from the groundwater metagenome Biosample: SAMN06267121

text: USA:Columbia River, Washington, USA

text: river sediment

text: 46.3720 N 119.272 W

characteristic: lat lon

text: groundwater metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Nitrospirota bacterium

text: metagenomic assembly


text: Colorado State University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: This biosample is a metagenomic assembly obtained from the freshwater sediment metagenome Biosample: SAMN16330884

text: USA:Columbia River, Washington, USA

text: river sediment

text: 46.3720 N 119.272 W

text: freshwater sediment metagenome

text: Nitrospirota bacterium

text: metagenomic assembly

characteristic: sample-type


text: Colorado State University

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: This biosample is a metagenomic assembly obtained from the groundwater metagenome Biosample: SAMN06267123

text: USA:Columbia River, Washington, USA

text: river sediment

text: 46.3720 N 119.272 W

text: groundwater metagenome

text: Nitrospirota bacterium

text: metagenomic assembly

characteristic: title


text: Colorado State University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: This biosample is a metagenomic assembly obtained from the groundwater metagenome Biosample: SAMN06267125

characteristic: derived-from

characteristic: environmental sample

text: USA:Columbia River, Washington, USA

characteristic: id

text: river sediment

text: 46.3720 N 119.272 W

text: groundwater metagenome

text: Nitrospirota bacterium

text: metagenomic assembly


text: Colorado State University

text: live

text: Microbe, viral or environmental

text: This biosample is a metagenomic assembly obtained from the freshwater sediment metagenome Biosample: SAMN16330876

text: USA:Columbia River, Washington, USA

characteristic: geo loc name

characteristic: isolate

text: river sediment

characteristic: isolation source

text: 46.3720 N 119.272 W

text: freshwater sediment metagenome

text: Nitrospirota bacterium

characteristic: organism

text: metagenomic assembly


characteristic: External Id

text: Colorado State University

text: live

text: Microbe, viral or environmental

text: This biosample is a metagenomic assembly obtained from the metagenome Biosample: SAMN06267115

text: USA:Columbia River, Washington, USA

text: river sediment

text: 46.3720 N 119.272 W

characteristic: lat lon

text: groundwater metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Acidobacteriota bacterium

text: metagenomic assembly

text: Microbe sample from Acidobacteriota bacterium


text: Colorado State University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: This biosample is a metagenomic assembly obtained from the metagenome Biosample: SAMN06266284

text: USA:Columbia River, Washington, USA

text: river sediment

text: 46.3720 N 119.272 W

text: groundwater metagenome

text: Armatimonadota bacterium

text: metagenomic assembly

characteristic: sample-type


text: Colorado State University

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: USA:Columbia River, Washington, USA

text: river sediment

text: 46.372775 N 119.271925 W

text: freshwater sediment metagenome

text: Armatimonadota bacterium

text: metagenomic assembly

text: Microbe sample from Armatimonadota bacterium

characteristic: title


text: Colorado State University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: This biosample is a metagenomic assembly obtained from the metagenome Biosample: SAMN06267118

characteristic: derived-from

characteristic: environmental sample

text: USA:Columbia River, Washington, USA

characteristic: id

text: river sediment

text: 46.22 N 119.16 W

text: groundwater metagenome

text: Armatimonadota bacterium

text: metagenomic assembly


text: Colorado State University

text: live

text: Microbe, viral or environmental

text: This biosample is a metagenomic assembly obtained from the metagenome Biosample: SAMN06267134

text: USA:Columbia River, Washington, USA

characteristic: geo loc name

characteristic: isolate

text: river sediment

characteristic: isolation source

text: 46.22 N 119.16 W

text: groundwater metagenome

text: Armatimonadota bacterium

characteristic: organism

text: metagenomic assembly


characteristic: External Id

text: Colorado State University

text: live

text: Microbe, viral or environmental

text: This biosample is a metagenomic assembly obtained from the metagenome Biosample: SAMN16330879

text: USA:Columbia River, Washington, USA

text: river sediment

text: 46.22 N 119.16 W

characteristic: lat lon

text: freshwater sediment metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Nitrospirota bacterium

text: metagenomic assembly

text: Microbe sample from Nitrospirota bacterium


text: Colorado State University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: This biosample is a metagenomic assembly obtained from the metagenome Biosample: SAMN16330884

text: USA:Columbia River, Washington, USA

text: river sediment

text: 46.22 N 119.16 W

text: freshwater sediment metagenome

text: Nitrospirota bacterium

text: metagenomic assembly

characteristic: sample-type


text: Colorado State University

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: This biosample is a metagenomic assembly obtained from the metagenome Biosample: SAMN16330881

text: USA:Columbia River, Washington, USA

text: river sediment

text: 46.22 N 119.16 W

text: freshwater sediment metagenome

text: Nitrospirota bacterium

text: metagenomic assembly

characteristic: title


text: Colorado State University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: This biosample is a metagenomic assembly obtained from the metagenome Biosample: SAMN16330875

characteristic: derived-from

characteristic: environmental sample

text: USA:Columbia River, Washington, USA

characteristic: id

text: river sediment

text: 46.22 N 119.16 W

text: freshwater sediment metagenome

text: Nitrospirota bacterium

text: metagenomic assembly


text: Colorado State University

text: live

text: Microbe, viral or environmental

text: This biosample is a metagenomic assembly obtained from the metagenome Biosample: SAMN16330883

text: USA:Columbia River, Washington, USA

characteristic: geo loc name

characteristic: isolate

text: river sediment

characteristic: isolation source

text: 46.22 N 119.16 W

text: freshwater sediment metagenome

text: Nitrospirota bacterium

characteristic: organism

text: metagenomic assembly


characteristic: External Id

text: Colorado State University

text: live

text: Microbe, viral or environmental

text: This biosample is a metagenomic assembly obtained from the metagenome Biosample: SAMN16330880

text: USA:Columbia River, Washington, USA

text: river sediment

text: 46.22 N 119.16 W

characteristic: lat lon

text: freshwater sediment metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Nitrospirota bacterium

text: metagenomic assembly


text: Colorado State University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: This biosample is a metagenomic assembly obtained from the metagenome Biosample: SAMN06267117

text: USA:Columbia River, Washington, USA

text: river sediment

text: 46.22 N 119.16 W

text: groundwater metagenome

text: Nitrospirota bacterium

text: metagenomic assembly

characteristic: sample-type


text: Colorado State University

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: This biosample is a metagenomic assembly obtained from the metagenome Biosample: SAMN06267135

text: USA:Columbia River, Washington, USA

text: river sediment

text: 46.22 N 119.16 W

text: groundwater metagenome

text: Nitrospirota bacterium

text: metagenomic assembly

characteristic: title


text: Colorado State University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: This biosample is a metagenomic assembly obtained from the metagenome Biosample: SAMN06267129

characteristic: derived-from

characteristic: environmental sample

text: USA:Columbia River, Washington, USA

characteristic: id

text: river sediment

text: 46.22 N 119.16 W

text: groundwater metagenome

text: Nitrospirota bacterium

text: metagenomic assembly


text: Colorado State University

text: live

text: Microbe, viral or environmental

text: USA:Columbia River, Washington, USA

characteristic: geo loc name

characteristic: isolate

text: river sediment

characteristic: isolation source

text: 46.22 N 119.16 W

text: groundwater metagenome

text: Nitrospirota bacterium

characteristic: organism

text: metagenomic assembly


characteristic: External Id

text: Colorado State University

text: live

text: Microbe, viral or environmental

text: This biosample is a metagenomic assembly obtained from the metagenome Biosample: SAMN06267126

text: USA:Columbia River, Washington, USA

text: river sediment

text: 46.22 N 119.16 W

characteristic: lat lon

text: groundwater metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Nitrospirota bacterium

text: metagenomic assembly


text: Colorado State University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: This biosample is a metagenomic assembly obtained from the metagenome Biosample: SAMN06265458

text: USA:Columbia River, Washington, USA

text: river sediment

text: 46.22 N 119.16 W

text: groundwater metagenome

text: Nitrospirota bacterium

text: metagenomic assembly

characteristic: sample-type


text: Colorado State University

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: This biosample is a metagenomic assembly obtained from the metagenome Biosample: SAMN06267123

text: USA:Columbia River, Washington, USA

text: river sediment

text: 46.22 N 119.16 W

text: groundwater metagenome

text: Nitrospirota bacterium

text: metagenomic assembly

characteristic: title


Pseudomonas nanhaiensis

text: BIOTECHNOLOGY RESEARCH INSTITUTE, CAAS

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: China: the South China Sea

text: deep-sea sediment

text: Halopseudomonas nanhaiensis

text: cell culture

characteristic: sample type

text: SCS 2-3

characteristic: strain

text: Microbe sample from Pseudomonas nanhaiensis SCS 2-3

text: type strain of Pseudomonas nanhaiensis

characteristic: type material


text: Shanghai Academy of Agricultural Sciences

text: live

text: Model organism or animal

text: Columba livia

characteristic: organism

text: female

characteristic: sex

text: Pectoral

characteristic: tissue

text: Model organism or animal sample from Columba livia


Tetrastigma hemsleyanum Diels & Gilg

characteristic: External Id

text: Zhejiang University

characteristic: INSDC secondary accession

text: live

text: Plant

characteristic: SRA accession

text: 3 years

characteristic: age

text: Yuhang

characteristic: cultivar

text: Maturity

text: China:Hangzhou,Zhejiang

text: Tetrastigma hemsleyanum

text: Leaves

text: Plant sample from Tetrastigma hemsleyanum


text: Quadram Institute Bioscience

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIMAG.human-gut

text: avicel

characteristic: Substrate

text: This BioSample is a metagenomic assembly obtained from the metagenome BioSamples: SAMN18754240,SAMN18754241,SAMN18754242

characteristic: derived-from

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: description

text: human gut microbiome

characteristic: environmental-sample

text: United Kingdom: Norwich

text: Homo sapiens

characteristic: host

characteristic: isolate

text: fecal sample from a healthy donor for a colon model experiment with avicel

text: 52.62 N 1.29 E

text: human gut metagenome

characteristic: metagenome-source

characteristic: metagenomic

text: Bacillota bacterium

text: metagenomic assembly

characteristic: sample-type


characteristic: External Id

text: Quadram Institute Bioscience

text: live

characteristic: INSDC status

text: MIMAG.human-gut

characteristic: NCBI submission model

characteristic: NCBI submission package

text: hylon

text: This BioSample is a metagenomic assembly obtained from the metagenome BioSamples: SAMN18754228,SAMN18754229,SAMN18754230,SAMN18754231

text: Keywords: GSC:MIxS;MIMAG:6.0

text: human gut microbiome

text: United Kingdom: Norwich

text: Homo sapiens

text: fecal sample from a healthy donor for a colon model experiment with hylon

text: 52.62 N 1.29 E

text: human gut metagenome

text: Bacteroides sp.

characteristic: organism

text: metagenomic assembly

characteristic: title


text: Quadram Institute Bioscience

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIMAG.human-gut

text: hylon

text: Keywords: GSC:MIxS;MIMAG:6.0

text: human gut microbiome

text: United Kingdom: Norwich

text: Homo sapiens

text: 52.62 N 1.29 E

text: human gut metagenome

text: Bacillota bacterium

text: metagenomic assembly


text: Quadram Institute Bioscience

characteristic: INSDC last update

text: live

text: MIMAG.human-gut

text: inulin

characteristic: Substrate

text: This BioSample is a metagenomic assembly obtained from the metagenome BioSamples: SAMN18754236, SAMN18754237,SAMN18754238, SAMN18754239

text: Keywords: GSC:MIxS;MIMAG:6.0

text: human gut microbiome

text: United Kingdom: Norwich

text: Homo sapiens

text: fecal sample from a healthy donor for a colon model experiment with inulin

text: 52.62 N 1.29 E

text: human gut metagenome

text: Bacillota bacterium

text: metagenomic assembly


text: Quadram Institute Bioscience

text: live

text: MIMAG.human-gut

text: pstarch

text: This BioSample is a metagenomic assembly obtained from the metagenome BioSamples: SAMN18754232,SAMN18754233,SAMN18754234,SAMN18754235

characteristic: derived-from

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: description

text: human gut microbiome

text: United Kingdom: Norwich

text: Homo sapiens

text: fecal sample from a healthy donor for a colon model experiment with potato starch

text: 52.62 N 1.29 E

text: human gut metagenome

text: Bacillota bacterium

text: metagenomic assembly


text: Quadram Institute Bioscience

text: live

text: MIMAG.human-gut

text: This BioSample is a metagenomic assembly obtained from the metagenome BioSamples: SAMN18754224,SAMN18754228,SAMN18754232,SAMN18754236,SAMN18754243

text: Keywords: GSC:MIxS;MIMAG:6.0

text: human gut microbiome

characteristic: environmental-sample

text: United Kingdom: Norwich

text: Homo sapiens

characteristic: host

text: fecal sample from a healthy donor for a colon model experiment, starting time

text: 52.62 N 1.29 E

text: human gut metagenome

text: Bacillota bacterium

text: metagenomic assembly


text: POSTECH

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: 8-12 weeks old

characteristic: age

text: brain endothelial cells (BECs)

characteristic: cell type

text: male

characteristic: gender

text: Mus musculus

text: brain endothelial cells

text: tie2-Cre; ai9; rpl22HA/HA mice

characteristic: strain

text: cortex

characteristic: tissue

text: pentylenetetrazol (PTZ)

characteristic: treatment


characteristic: External Id

text: POSTECH

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 8-12 weeks old

text: brain endothelial cells (BECs)

text: male

text: Mus musculus

characteristic: organism

text: brain endothelial cells

text: tie2-Cre; ai9; rpl22HA/HA mice

text: cortex

characteristic: title

text: phosphate buffered saline (PBS)


text: University of Helsinki

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Model organism or animal

text: Batrachedra confusella

text: legs


text: University of Helsinki

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

text: Batrachedra confusella

text: TLMF Lep 10349

text: legs

text: TLMF Lep 10349


text: University of Helsinki

text: live

text: Model organism or animal

characteristic: SRA accession

text: Batrachedra confusella

text: TLMF Lep 18779

text: legs

text: TLMF Lep 18779


text: University of Helsinki

text: live

text: Model organism or animal

text: Batrachedra pinicolella

text: legs


text: University of Helsinki

text: live

text: Model organism or animal

text: Batrachedra pinicolella

text: TLMF Lep 17972

text: legs

text: TLMF Lep 17972


text: Anhui medical university

text: live

text: Generic

text: peripheral blood mononuclear cell

text: healthy control

characteristic: disease state

text: Homo sapiens

text: peripheral blood

text: peripheral blood


text: Anhui medical university

text: live

text: Generic

text: peripheral blood mononuclear cell

characteristic: cell type

text: systemic lupus erythematosus patient

text: Homo sapiens

text: peripheral blood

text: peripheral blood


text: Inner Mongolia Agricultural University

text: live

text: Microbe, viral or environmental

text: China: Inner Mongolia

text: koumiss (fermented mare's milk)

text: Lacticaseibacillus paracasei

text: mixed culture

text: Zhang

text: Microbe sample from Lacticaseibacillus paracasei


Bacteroidetes sp. CROMO_A_64

text: University of Utah

text: live

text: MIMAG.water

characteristic: collection date

characteristic: depth

text: This BioSample is a metagenomic assembly obtained from the groundwater metagenome BioSample: SAMN16578990

characteristic: derived-from

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: description

characteristic: environmental sample

text: USA:California

characteristic: geo loc name

characteristic: isolate

text: well water

characteristic: isolation source

text: 38.8257 N 122.35152 W

characteristic: lat lon

text: grounwater metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Bacteroidota bacterium

text: metagenomic assembly

characteristic: sample-type

text: MIMAG Metagenome-assembled Genome sample from Bacteroidota bacterium


Bacteroidetes sp. CROMO_A_117

characteristic: External Id

text: University of Utah

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIMAG.water

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Keywords: GSC:MIxS;MIMAG:6.0

text: USA:California

text: well water

text: 38.8257 N 122.35152 W

text: grounwater metagenome

text: Bacteroidota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: title


Bacteroidetes sp. CROMO_A_120

text: University of Utah

text: live

text: MIMAG.water

characteristic: collection date

characteristic: depth

characteristic: derived-from

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: description

characteristic: environmental sample

text: USA:California

text: well water

text: 38.8257 N 122.35152 W

text: grounwater metagenome

text: Bacteroidota bacterium

text: metagenomic assembly


Rhodobacteraceae sp. CROMO_A_187

text: University of Utah

text: live

text: MIMAG.water

text: Keywords: GSC:MIxS;MIMAG:6.0

text: USA:California

characteristic: geo loc name

characteristic: isolate

text: well water

characteristic: isolation source

text: 38.8257 N 122.35152 W

characteristic: lat lon

text: grounwater metagenome

characteristic: metagenome source

text: Paracoccaceae bacterium

text: metagenomic assembly

text: MIMAG Metagenome-assembled Genome sample from Paracoccaceae bacterium


Bacteroidetes sp. CROMO_BS_85_0

characteristic: External Id

text: University of Utah

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIMAG.water

text: Keywords: GSC:MIxS;MIMAG:6.0

text: USA:California

text: well water

text: 38.8257 N 122.35152 W

text: grounwater metagenome

characteristic: metagenomic

text: Bacteroidota bacterium

text: metagenomic assembly

characteristic: sample-type


Firmicutes bacterium BS 1_0_4

text: University of Utah

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIMAG.water

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Keywords: GSC:MIxS;MIMAG:6.0

text: USA:California

text: well water

text: 38.8257 N 122.35152 W

text: grounwater metagenome

text: Bacillota bacterium

characteristic: organism

text: metagenomic assembly

text: MIMAG Metagenome-assembled Genome sample from Bacillota bacterium


T lymphocytes

text: University Of Verona

characteristic: INSDC secondary accession

text: live

text: Human

characteristic: SRA accession

text: not collected

characteristic: age

text: Carlo Laudanna Lab, University of Verona, Department of Medicine, Section of General Pathology, Strada Le Grazie 8, 37134 Verona, Italy

text: primary cells

text: T lymphocytes

text: leukocytes

text: primary T lymphocytes

characteristic: description

text: healthy

text: healthy donhor

text: Homo sapiens

text: primary T lymphocytes

text: not collected

characteristic: sex

text: peripheral blood

characteristic: tissue

text: T lymphocytes

characteristic: title


B lymphocytes

characteristic: External Id

text: University Of Verona

text: live

text: Human

text: not collected

text: primary cells

text: B lymphocytes

text: leukocytes

text: primary B lymphocytes

text: healthy

text: healthy donhor

characteristic: isolate

text: Homo sapiens

text: primary B lymphocytes

text: not collected

text: peripheral blood

text: B lymphocytes


text: MPI-CBG

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: GST-Ferry complex

characteristic: bait

text: HEK 293

characteristic: cell line

text: HEK 293 suspension cells

characteristic: cell type

text: Homo sapiens

text: HEK 293

text: GST-Ferry rep 1


text: MPI-CBG

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: GST

text: HEK 293

text: HEK 293 suspension cells

text: Homo sapiens

text: HEK 293

text: GST rep 3


text: MPI-CBG

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

text: GST

text: HEK 293

text: HEK 293 suspension cells

text: Homo sapiens

characteristic: organism

text: HEK 293

text: GST rep 2


text: MPI-CBG

text: live

text: Generic

characteristic: SRA accession

text: GST

text: HEK 293

text: HEK 293 suspension cells

text: Homo sapiens

text: HEK 293

text: GST rep 1


text: MPI-CBG

text: live

text: Generic

text: GST-Ferry complex

text: HEK 293

text: HEK 293 suspension cells

text: Homo sapiens

text: HEK 293

text: GST-Ferry rep 3


text: MPI-CBG

text: live

text: Generic

text: GST-Ferry complex

text: HEK 293

text: HEK 293 suspension cells

text: Homo sapiens

text: HEK 293

text: GST-Ferry rep 2


text: Institute of Genetic Medicine and Institute for Ageing, Newcastle University

text: live

text: Generic

text: Homo sapiens

text: RB_wt (patient derived, iPSC)

characteristic: sample type

text: Organoids


text: live

text: Generic

text: Homo sapiens

text: RB_hetrozygous (patient derived, iPSC)

text: Organoids

text: RB_hetrozygous (c.2082delC)


text: live

text: Generic

text: Homo sapiens

text: RB_homozygous (patient derived, iPSC)

text: Organoids

text: RB_homozygous (c.2082delC)


text: live

text: Generic

text: Homo sapiens

text: RB1_null_Ros (human ESC derived, H9)

text: Organoids


text: live

text: Generic

text: Homo sapiens

text: Control_Ros (human ESC derived, H9)

text: Organoids


text: Instituto Potosino de Investigacion Cientifica y Tecnologica AC

text: live

text: Metagenome or environmental

characteristic: collection date

text: Dark biocrust sample

characteristic: description

text: Mexico: Durango, Mapimi Biophere Reserve

characteristic: geo loc name

text: soil

characteristic: isolation source

text: 26.617126 N 103.832028 W

characteristic: lat lon

text: biocrust metagenome


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: Dark biocrust sample

text: soil

text: 26.617126 N 103.832029 W

text: biocrust metagenome

characteristic: title


characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: Dark biocrust sample

text: soil

text: 26.617126 N 103.832030 W

text: biocrust metagenome


text: live

characteristic: INSDC status

text: Metagenome or environmental

text: Dark biocrust sample

text: soil

text: 26.617126 N 103.832031 W

text: biocrust metagenome


text: live

text: Metagenome or environmental

characteristic: NCBI submission model

text: Dark biocrust sample

text: soil

text: 26.617126 N 103.832032 W

text: biocrust metagenome


characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: Dark biocrust sample

text: soil

text: 26.617126 N 103.832033 W

text: biocrust metagenome


text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Dark biocrust sample

text: soil

text: 26.617126 N 103.832034 W

text: biocrust metagenome


text: live

text: Metagenome or environmental

text: Dark biocrust sample

text: soil

text: 26.617126 N 103.832035 W

text: biocrust metagenome

characteristic: organism


text: live

text: Metagenome or environmental

characteristic: SRA accession

text: Dark biocrust sample

text: soil

text: 26.610157 N 103.892916 W

text: biocrust metagenome


text: live

text: Metagenome or environmental

text: Dark biocrust sample

text: soil

text: 26.610157 N 103.892917 W

text: biocrust metagenome


text: live

text: Metagenome or environmental

text: Dark biocrust sample

text: soil

text: 26.610157 N 103.892918 W

text: biocrust metagenome


text: live

text: Metagenome or environmental

text: Dark biocrust sample

text: soil

text: 26.610157 N 103.892919 W

text: biocrust metagenome


text: live

text: Metagenome or environmental

text: Dark biocrust sample

text: soil

text: 26.610157 N 103.892920 W

text: biocrust metagenome


text: live

text: Metagenome or environmental

text: Dark biocrust sample

text: soil

text: 26.610157 N 103.892921 W

text: biocrust metagenome


text: live

text: Metagenome or environmental

text: Dark biocrust sample

text: soil

text: 26.610157 N 103.892922 W

text: biocrust metagenome


text: live

text: Metagenome or environmental

text: Dark biocrust sample

text: soil

text: 26.610157 N 103.892923 W

text: biocrust metagenome


text: live

text: Metagenome or environmental

text: Dark biocrust sample

text: soil

text: 26.603359 N 103.886131 W

text: biocrust metagenome


text: live

text: Metagenome or environmental

text: Dark biocrust sample

text: soil

text: 26.603359 N 103.886132 W

text: biocrust metagenome


text: live

text: Metagenome or environmental

text: Dark biocrust sample

text: soil

text: 26.603359 N 103.886133 W

text: biocrust metagenome


text: live

text: Metagenome or environmental

text: Dark biocrust sample

text: soil

text: 26.603359 N 103.886134 W

text: biocrust metagenome


text: live

text: Metagenome or environmental

text: Dark biocrust sample

text: soil

text: 26.603359 N 103.886135 W

text: biocrust metagenome


text: live

text: Metagenome or environmental

text: Dark biocrust sample

text: soil

text: 26.603359 N 103.886136 W

text: biocrust metagenome


text: live

text: Metagenome or environmental

text: Dark biocrust sample

text: soil

text: 26.603359 N 103.886137 W

text: biocrust metagenome


text: live

text: Metagenome or environmental

text: Dark biocrust sample

text: soil

text: 26.603359 N 103.886138 W

text: biocrust metagenome


text: live

text: Metagenome or environmental

text: Dark biocrust sample

text: soil

text: 26.723823 N 103.839114 W

text: biocrust metagenome


text: live

text: Metagenome or environmental

text: Dark biocrust sample

text: soil

text: 26.723823 N 103.839115 W

text: biocrust metagenome


text: live

text: Metagenome or environmental

text: Dark biocrust sample

text: soil

text: 26.723823 N 103.839116 W

text: biocrust metagenome


text: live

text: Metagenome or environmental

text: Dark biocrust sample

text: soil

text: 26.723823 N 103.839117 W

text: biocrust metagenome


text: live

text: Metagenome or environmental

text: Dark biocrust sample

text: soil

text: 26.723823 N 103.839118 W

text: biocrust metagenome


text: live

text: Metagenome or environmental

text: Dark biocrust sample

text: soil

text: 26.723823 N 103.839119 W

text: biocrust metagenome


text: live

text: Metagenome or environmental

text: Dark biocrust sample

text: soil

text: 26.723823 N 103.839120 W

text: biocrust metagenome


text: live

text: Metagenome or environmental

text: Dark biocrust sample

text: soil

text: 26.723823 N 103.839121 W

text: biocrust metagenome


Tetrastigma hemsleyanum transcriptome

text: Zhejiang University

text: live

text: Plant

text: 3 years

characteristic: age

text: Zhejiang and Guangxi

characteristic: cultivar

text: Maturity

text: China:Hangzhou,Zhejiang

text: Tetrastigma hemsleyanum

text: root,stem,leaf

characteristic: tissue

text: Plant sample from Tetrastigma hemsleyanum