text: University of Montreal

text: live

characteristic: INSDC status

text: MIMAG.water

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Keywords: GSC:MIxS;MIMAG:6.0

text: Freshwater biome

text: Mesocosm pond

text: Freshwater

text: Canada: Gault Nature Reserve

text: 45.55 N 73.15 W

text: freshwater metagenome

text: Pseudomonadota bacterium

text: metagenomic assembly

text: MAG_00035 in pond H1

characteristic: title


status: PUBLIC

characteristic: External Id

text: University of Montreal

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIMAG.water

tag: attribute

characteristic: depth

text: SAMN21905374, SAMN21905375, SAMN21905376, SAMN21905377, SAMN21905378, SAMN21905379, SAMN21905380, SAMN21905381, SAMN21905382, SAMN21905383, SAMN21905384

characteristic: derived-from

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: description

text: Freshwater biome

text: Mesocosm pond

text: Freshwater

characteristic: environmental sample

text: Canada: Gault Nature Reserve

characteristic: geo loc name

characteristic: isolate

text: pond H1 freshwater mesocosm in the Large Experimental Array of Ponds platform

characteristic: isolation source

text: 45.55 N 73.15 W

characteristic: lat lon

text: freshwater metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Pseudomonadota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample-type

text: MAG_00051 in pond H1


text: Mississippi State University

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: USA: Mississippi

text: Ictalurus punctatus

characteristic: host

text: gill tissue

text: 33.42207830 N 90.90925007 W

text: gill metagenome

text: Metagenome or environmental sample from gill metagenome

characteristic: title


characteristic: External Id

text: Mississippi State University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: USA: Mississippi

text: Ictalurus sp.

text: gill tissue

text: 33.42207830 N 90.90925007 W

text: gill metagenome


text: Systems Biology of Gene Regulatory Elements (N. Rajewsky), Berlin Institute for Medical Systems Biology, Max Delbrueck Center for Molecular Medicine in the Helmholtz Association

text: live

text: Generic

text: Homo sapiens

text: CasRx plasmid, TagRFP plasmid, non-targeting guide RNA plasmid

characteristic: plasmid


text: live

text: Generic

text: Homo sapiens

text: CasRx plasmid, TagRFP plasmid, RFP-targeting guide RNA plasmid


text: live

text: Generic

text: Homo sapiens

text: HiPSC (XMO01)

text: PA-Cre/Lox, LoxP RFP LoxP SHH NG

characteristic: stable line

text: non induced (0h)

characteristic: time of induction


text: live

text: Generic

text: Homo sapiens

text: HiPSC (XMO01)

text: PA-Cre/Lox, LoxP RFP LoxP SHH NG


text: United States Department of Agriculture

text: live

text: Invertebrate

text: Kathy Leonard, Erin Scully

text: Adult

text: USA: Kansas, Manhattan

text: not available

characteristic: isolate

text: Lab Colony

text: Cynaeus angustus

text: not determined

characteristic: sex

text: Thorax, Abdomen

characteristic: tissue

text: Cynaeus angustus adult


text: United States Department of Agriculture

characteristic: INSDC secondary accession

text: live

text: Invertebrate

text: Kathy Leonard and Erin Scully, USDA-ARS

text: Adult

text: USA: Kansas,Manhattan

text: not available

text: USDA-ARS CGAHR

text: Lab Colony

text: Gnatocerus cornutus

characteristic: organism

text: male

text: Thorax and Abdomen

text: Gnatocerus cornutus adult male


text: Nanjing Forestry University

text: live

characteristic: INSDC status

text: Plant

characteristic: NCBI submission model

text: Hua Wu

characteristic: cultivar

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: Callus on the subculture medium - replicate 1


text: Nanjing Forestry University

text: live

text: Plant

characteristic: NCBI submission package

characteristic: SRA accession

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: Callus on the subculture medium - replicate 2


characteristic: External Id

text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: Callus on the subculture medium - replicate 3

characteristic: title


text: Nanjing Forestry University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 1d after callus were placed on the SE induction medium - replicate 1


text: Nanjing Forestry University

characteristic: INSDC last update

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 1d after callus were placed on the SE induction medium - replicate 2


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 1d after callus were placed on the SE induction medium - replicate 3


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 3d after callus were placed on the SE induction medium - replicate 1


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 3d after callus were placed on the SE induction medium - replicate 2


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 3d after callus were placed on the SE induction medium - replicate 3


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 5d after callus were placed on the SE induction medium - replicate 1


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 5d after callus were placed on the SE induction medium - replicate 2


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 5d after callus were placed on the SE induction medium - replicate 3


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 7d after callus were placed on the SE induction medium - replicate 1


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 7d after callus were placed on the SE induction medium - replicate 2


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 7d after callus were placed on the SE induction medium - replicate 3


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 15d after callus were placed on the SE induction medium - replicate 1


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 15d after callus were placed on the SE induction medium - replicate 2


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 15d after callus were placed on the SE induction medium - replicate 3


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 30d after callus were placed on the SE induction medium - replicate 1


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 30d after callus were placed on the SE induction medium - replicate 2


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 30d after callus were placed on the SE induction medium - replicate 3


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 40d after callus were placed on the SE induction medium - replicate 1


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 40d after callus were placed on the SE induction medium - replicate 2


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 40d after callus were placed on the SE induction medium - replicate 3


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 1d after callus were placed on the SE induction medium supplemented PSK - replicate 1


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 1d after callus were placed on the SE induction medium supplemented PSK - replicate 2


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 1d after callus were placed on the SE induction medium supplemented PSK - replicate 3


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 3d after callus were placed on the SE induction medium supplemented PSK - replicate 1


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 3d after callus were placed on the SE induction medium supplemented PSK - replicate 2


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 3d after callus were placed on the SE induction medium supplemented PSK - replicate 3


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 5d after callus were placed on the SE induction medium supplemented PSK - replicate 1


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 5d after callus were placed on the SE induction medium supplemented PSK - replicate 2


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 5d after callus were placed on the SE induction medium supplemented PSK - replicate 3


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 7d after callus were placed on the SE induction medium supplemented PSK - replicate 1


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 7d after callus were placed on the SE induction medium supplemented PSK - replicate 2


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 7d after callus were placed on the SE induction medium supplemented PSK - replicate 3


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 15d after callus were placed on the SE induction medium supplemented PSK - replicate 1


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 15d after callus were placed on the SE induction medium supplemented PSK - replicate 2


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 15d after callus were placed on the SE induction medium supplemented PSK - replicate 3


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 30d after callus were placed on the SE induction medium supplemented PSK - replicate 1


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 30d after callus were placed on the SE induction medium supplemented PSK - replicate 2


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 30d after callus were placed on the SE induction medium supplemented PSK - replicate 3


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 40d after callus were placed on the SE induction medium supplemented PSK - replicate 1


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 40d after callus were placed on the SE induction medium supplemented PSK - replicate 2


text: Nanjing Forestry University

text: live

text: Plant

text: Hua Wu

text: Somatic embryogenesis

text: China: Fujian

text: Cunninghamia lanceolata

text: 40d after callus were placed on the SE induction medium supplemented PSK - replicate 3


text: Institute of Pathogen Biology, CAMS & PUMC

text: live

text: Model organism or animal

text: 12 weeks

characteristic: age

text: Whole exome sequencing of colon tumors derived from Apc (Min716/+) transgenic mice

characteristic: description

text: colon cancer

characteristic: disease

text: Apc (Min716/+)

characteristic: genotype

text: Mus musculus

text: mouse tumor genomic DNA exome capture

text: male

text: C57BL/6 background

characteristic: strain

text: colon tumor


text: Pellegrini Lab, Molecular Biology Institute, UCLA

characteristic: INSDC secondary accession

text: live

text: Generic

text: NK cell

characteristic: cell type

text: UTX KO

text: control

characteristic: infection

text: Mus musculus

text: Spleen

text: Day 0

characteristic: time

text: ATAC Day 0 KO replicate 1


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: NK cell

text: UTX KO

text: control

text: Mus musculus

characteristic: organism

text: Spleen

text: Day 0

text: ATAC Day 0 KO replicate 2


characteristic: External Id

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: NK cell

text: UTX KO

text: control

text: Mus musculus

text: Spleen

text: Day 0

text: ATAC Day 0 KO replicate 3


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: NK cell

text: WT

text: control

text: Mus musculus

text: Spleen

text: Day 0

text: ATAC Day 0 WT replicate 1

characteristic: title


characteristic: INSDC last update

text: live

text: Generic

text: NK cell

text: WT

text: control

text: Mus musculus

text: Spleen

text: Day 0

text: ATAC Day 0 WT replicate 2


text: live

text: Generic

text: NK cell

text: WT

text: control

text: Mus musculus

text: Spleen

text: Day 0

text: ATAC Day 0 WT replicate 3


text: live

text: Generic

text: NK cell

text: UTX KO

text: MCMV

text: Mus musculus

text: Spleen

text: Day 1.5

text: ATAC Day 1.5 KO replicate 4


text: live

text: Generic

text: NK cell

text: UTX KO

text: MCMV

text: Mus musculus

text: Spleen

text: Day 1.5

text: ATAC Day 1.5 KO replicate 5


text: live

text: Generic

text: NK cell

text: UTX KO

text: MCMV

text: Mus musculus

text: Spleen

text: Day 1.5

text: ATAC Day 1.5 KO replicate 6


text: live

text: Generic

text: NK cell

text: WT

text: MCMV

text: Mus musculus

text: Spleen

text: Day 1.5

text: ATAC Day 1.5 WT replicate 4


text: live

text: Generic

text: NK cell

text: WT

text: MCMV

text: Mus musculus

text: Spleen

text: Day 1.5

text: ATAC Day 1.5 WT replicate 5


text: live

text: Generic

text: NK cell

text: WT

text: MCMV

text: Mus musculus

text: Spleen

text: Day 1.5

text: ATAC Day 1.5 WT replicate 6


text: live

text: Generic

text: NK cell

text: UTX KO

text: control

text: Mus musculus

text: Spleen

text: Day 0

text: RNA-seq Day 0 KO replicate 1B


text: live

text: Generic

text: NK cell

text: UTX KO

text: control

text: Mus musculus

text: Spleen

text: Day 0

text: RNA-seq Day 0 KO replicate 3B


text: live

text: Generic

text: NK cell

text: UTX KO

text: control

text: Mus musculus

text: Spleen

text: Day 0

text: RNA-seq Day 0 KO replicate 4B


text: live

text: Generic

text: NK cell

text: WT

text: control

text: Mus musculus

text: Spleen

text: Day 0

text: RNA-seq Day 0 WT replicate 1A


text: live

text: Generic

text: NK cell

text: WT

text: control

text: Mus musculus

text: Spleen

text: Day 0

text: RNA-seq Day 0 WT replicate 3A


text: live

text: Generic

text: NK cell

text: WT

text: control

text: Mus musculus

text: Spleen

text: Day 0

text: RNA-seq Day 0 WT replicate 4A


text: live

text: Generic

text: NK cell

text: UTX KO

text: MCMV

text: Mus musculus

text: Spleen

text: Day 1.5

text: RNA-seq Day 1.5 KO replicate 5B


text: live

text: Generic

text: NK cell

text: UTX KO

text: MCMV

text: Mus musculus

text: Spleen

text: Day 1.5

text: RNA-seq Day 1.5 KO replicate 6B


text: live

text: Generic

text: NK cell

text: UTX KO

text: MCMV

text: Mus musculus

text: Spleen

text: Day 1.5

text: RNA-seq Day 1.5 KO replicate 8B


text: live

text: Generic

text: NK cell

text: WT

text: MCMV

text: Mus musculus

text: Spleen

text: Day 1.5

text: RNA-seq Day 1.5 WT replicate 5A


text: live

text: Generic

text: NK cell

text: WT

text: MCMV

text: Mus musculus

text: Spleen

text: Day 1.5

text: RNA-seq Day 1.5 WT replicate 7A


text: live

text: Generic

text: NK cell

text: WT

text: MCMV

text: Mus musculus

text: Spleen

text: Day 1.5

text: RNA-seq Day 1.5 WT replicate 8A


Osteogeneiosus militaris

text: Iridian Genomes

text: live

text: Model organism or animal

text: Ricardo Betancur

characteristic: biomaterial provider

text: adult

characteristic: dev stage

text: IRGN AWMTQAVMA8

characteristic: isolate

text: Osteogeneiosus militaris

text: not determined

characteristic: sex

text: muscle

characteristic: tissue

text: Model organism or animal sample from Osteogeneiosus militaris


text: Rutgers, the State University of New Jersey

characteristic: INSDC secondary accession

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Schizosaccharomyces pombe

characteristic: strain

text: MIGS Eukaryotic sample from Schizosaccharomyces pombe


Notarius lentiginosus

text: Iridian Genomes

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

text: Ricardo Betancur

text: adult

text: IRGN IK3HEW008G

text: Notarius lentiginosus

text: not determined

text: muscle

text: Model organism or animal sample from Notarius lentiginosus


characteristic: External Id

text: Instituto Mexicano del Seguro Social

text: live

text: Pathogen.cl

text: Emmanuel Aguilar

text: Mexico

text: Homo sapiens

characteristic: host

text: Pseudomembranous colitis

text: feces

text: 19.42847 N 99.12766 W

text: Clostridioides difficile

characteristic: organism

text: Pathogen: clinical or host-associated sample from Clostridioides difficile


text: Utah Public Health Laboratory Infectious Disease submission group

characteristic: INSDC center name

text: live

characteristic: MLST

text: Pathogen.cl

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: collection date

text: USA

characteristic: geo loc name

text: Homo sapiens

text: Wound/Abscess

characteristic: isolation source

text: Pseudomonas aeruginosa

text: Pathogen: clinical or host-associated sample from Pseudomonas aeruginosa


text: PSC

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: 5 days

characteristic: age

characteristic: ecotype

text: WT

characteristic: genotype

text: Arabidopsis thaliana

text: 5-day-old seedlings

text: Total seedlings

text: Input_WT-1 [H3K27me3]

characteristic: title


text: PSC

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: 5 days

text: WT

text: Arabidopsis thaliana

text: 5-day-old seedlings

text: Total seedlings

characteristic: tissue

text: Input_WT-2 [H3K27me3]


characteristic: External Id

text: PSC

characteristic: INSDC center name

text: live

text: Generic

text: 5 days

text: WT

text: Arabidopsis thaliana

characteristic: organism

text: 5-day-old seedlings

text: Total seedlings

text: Input_WT-3 [H3K27me3]


text: PSC

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: 5 days

text: anti-H3K27me3 (Millipore, 07-449)

characteristic: chip antibody

text: WT

text: Arabidopsis thaliana

text: 5-day-old seedlings

text: Total seedlings

text: IP_WT-1 [H3K27me3]


text: PSC

text: live

text: Generic

text: 5 days

text: anti-H3K27me3 (Millipore, 07-449)

text: WT

text: Arabidopsis thaliana

text: 5-day-old seedlings

text: Total seedlings

text: IP_WT-2 [H3K27me3]


text: PSC

text: live

text: Generic

text: 5 days

text: anti-H3K27me3 (Millipore, 07-449)

text: WT

text: Arabidopsis thaliana

text: 5-day-old seedlings

text: Total seedlings

text: IP_WT-3 [H3K27me3]


text: PSC

text: live

text: Generic

text: 5 days

text: WT

text: Arabidopsis thaliana

text: 5-day-old seedlings

text: Total seedlings

text: Input_WT-1 [H3K4me3]


text: PSC

text: live

text: Generic

text: 5 days

text: WT

text: Arabidopsis thaliana

text: 5-day-old seedlings

text: Total seedlings

text: Input_WT-2 [H3K4me3]


text: PSC

text: live

text: Generic

text: 5 days

text: WT

text: Arabidopsis thaliana

text: 5-day-old seedlings

text: Total seedlings

text: Input_WT-3 [H3K4me3]


text: PSC

text: live

text: Generic

text: 5 days

text: anti-H3K4me3 (Millipore, 05-745 R)

text: WT

text: Arabidopsis thaliana

text: 5-day-old seedlings

text: Total seedlings

text: IP_WT-1 [H3K4me3]


text: PSC

text: live

text: Generic

text: 5 days

text: anti-H3K4me3 (Millipore, 05-745 R)

text: WT

text: Arabidopsis thaliana

text: 5-day-old seedlings

text: Total seedlings

text: IP_WT-2 [H3K4me3]


text: PSC

text: live

text: Generic

text: 5 days

text: anti-H3K4me3 (Millipore, 05-745 R)

text: WT

text: Arabidopsis thaliana

text: 5-day-old seedlings

text: Total seedlings

text: IP_WT-3 [H3K4me3]


text: Naturalis Biodiversity Center

text: live

text: MIMARKS.specimen

characteristic: collection date

characteristic: depth

text: e4057165290_NBCLAB3717_UPG90-sand3-for24_EG005_C_D10_EG005-6_72445-75

characteristic: description

characteristic: elev

text: Coral reef

text: Coral reef

text: Sediment

text: Indonesia: Spermonde Archipelago

characteristic: geo loc name

text: 5.0517 S 119.353875 E

characteristic: lat lon

text: Operculina sp. (in: forams)

text: COI

characteristic: strain

text: MIMARKS Specimen sample from Operculina sp. (in: forams)


text: Naturalis Biodiversity Center

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: MIMARKS.specimen

text: e4057165219_NBCLAB3719_UPG90-sand3-for26_EG005_C_G10_EG005-6_72445-78

characteristic: ecotype

text: Coral reef

text: Coral reef

text: Sediment

text: Indonesia: Spermonde Archipelago

text: 5.0517 S 119.353875 E

text: Operculina sp. (in: forams)

text: COI

characteristic: title


MSC EV-tRNA-1

characteristic: External Id

text: Shonan Kamakura General Hospital

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Human

characteristic: NCBI submission model

characteristic: age

text: Commercial available cell lines (lonza)

text: EV-derived tRNA

characteristic: isolate

text: Homo sapiens

text: female

characteristic: sex

text: BM-derived MSC

characteristic: tissue

text: Human sample from Homo sapiens


text: Shonan Kamakura General Hospital

text: live

text: Human

characteristic: NCBI submission package

characteristic: SRA accession

text: Commercial available cell lines (lonza)

text: EV-derived tRNA

text: Homo sapiens

characteristic: organism

text: male

text: PB-derived MNC

text: Human sample from Homo sapiens


text: Department of Biology and Biological Engineering, Chalmers University of Technology

text: live

text: Generic

characteristic: cell line

text: Hepatocarcinoma cells

characteristic: cell type

text: Homo sapiens

text: Non-tretaed Huh7 cells

text: RNA-Seq of Huh7 cells control non-treated-rep1 [P19760_101_S32]


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Hepatocarcinoma cells

text: Homo sapiens

text: Non-tretaed Huh7 cells

text: RNA-Seq of Huh7 cells control non-treated-rep2 [P19760_102_S33]


characteristic: INSDC secondary accession

text: live

text: Generic

text: Hepatocarcinoma cells

text: Homo sapiens

text: Non-tretaed Huh7 cells

text: RNA-Seq of Huh7 cells control non-treated-rep3 [P19760_103_S34]


text: live

text: Generic

text: Hepatocarcinoma cells

text: Homo sapiens

text: Tretaed Huh7 cells with 400ug/ml GO

text: RNA-Seq of Huh7 cells treated with 400ug/ml GO-rep1 [P19760_109_S35]

characteristic: title

text: 400 ug/ml GO

characteristic: treatment


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: Hepatocarcinoma cells

text: Homo sapiens

text: Tretaed Huh7 cells with 400ug/ml GO

text: RNA-Seq of Huh7 cells treated with 400ug/ml GO-rep2 [P19760_110_S36]

text: 400 ug/ml GO


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Hepatocarcinoma cells

text: Homo sapiens

text: Tretaed Huh7 cells with 400ug/ml GO

text: RNA-Seq of Huh7 cells treated with 400ug/ml GO-rep3 [P19760_111_S37]

text: 400 ug/ml GO


text: live

text: Generic

text: Hepatocarcinoma cells

text: Homo sapiens

text: Tretaed Huh7 cells with 400ug/ml GO-Rg3

text: RNA-Seq of Huh7 cells treated with 400ug/ml GO-Rg3-rep1 [P19760_117_S38]

text: 400 ug/ml GO-Rg3


text: live

text: Generic

text: Hepatocarcinoma cells

text: Homo sapiens

text: Tretaed Huh7 cells with 400ug/ml GO-Rg3

text: RNA-Seq of Huh7 cells treated with 400ug/ml GO-Rg3-rep2 [P19760_118_S39]

text: 400 ug/ml GO-Rg3


text: live

text: Generic

text: Hepatocarcinoma cells

text: Homo sapiens

text: Tretaed Huh7 cells with 400ug/ml GO-Rg3

text: RNA-Seq of Huh7 cells treated with 400ug/ml GO-Rg3-rep3 [P19760_119_S40]

text: 400 ug/ml GO-Rg3


text: live

text: Generic

text: Hepatocarcinoma cells

text: Homo sapiens

text: Tretaed Huh7 cells with 100ug/ml GO-Rg3-DOX

text: RNA-Seq of Huh7 cells treated with 100ug/ml GO-Rg3-DOX-rep1 [P19760_125_S41]

text: 100 ug/ml GO-Rg3-DOX


text: live

text: Generic

text: Hepatocarcinoma cells

text: Homo sapiens

text: RNA-Seq of Huh7 cells treated with 100ug/ml GO-Rg3-DOX-rep2 [P19760_126_S42]

text: 100 ug/ml GO-Rg3-DOX


text: live

text: Generic

text: Hepatocarcinoma cells

text: Homo sapiens

text: RNA-Seq of Huh7 cells treated with 100ug/ml GO-Rg3-DOX-rep3 [P19760_127_S43]

text: 100 ug/ml GO-Rg3-DOX


text: Institute of Hematology & Blood Diseases Hospital, Chinese Academy of Medical Sciences

text: live

text: Generic

text: 8-10 weeks

characteristic: cell stage

text: Mus musculus

characteristic: strain

text: Bone marrow

text: M-MPAL


text: live

text: Generic

text: 8-10 weeks

text: Mus musculus

text: Bone marrow

characteristic: tissue

text: T-MPAL


text: live

text: Generic

characteristic: NCBI submission package

text: 8-10 weeks

text: Mus musculus

text: GFP+

text: Bone marrow

text: Empty control


text: live

text: Generic

characteristic: SRA accession

text: 8-10 weeks

text: Mus musculus

text: Bone marrow

text: The integration sites of N-Myc 1


text: live

text: Generic

text: 8-10 weeks

text: Mus musculus

characteristic: organism

text: Bone marrow

text: The integration sites of N-Myc 2


text: Yangzhou University

text: live

text: Model organism or animal

text: Yangzhou University

text: Sus scrofa

text: Negative control_ATAC-seq_biological replicate 1

characteristic: replicate

text: intestinal epithelial cell

text: intestine

text: Model organism or animal sample from Sus scrofa


text: Yangzhou University

text: live

text: Model organism or animal

text: Yangzhou University

text: Sus scrofa

text: Negative control_ATAC-seq_biological replicate 2

text: intestinal epithelial cell

text: intestine


text: Yangzhou University

text: live

text: Model organism or animal

text: Yangzhou University

text: Sus scrofa

text: Negative control_ATAC-seq_biological replicate 3

text: intestinal epithelial cell

text: intestine


E. coli F18ac_ATAC_Rep1

text: Yangzhou University

text: live

text: Model organism or animal

text: Yangzhou University

text: Sus scrofa

text: E. coli F18ac treatment_ATAC-seq_biological replicate 1

text: intestinal epithelial cell

text: intestine


E. coli F18ac_ATAC_Rep2

text: Yangzhou University

text: live

text: Model organism or animal

text: Yangzhou University

text: Sus scrofa

text: E. coli F18ac treatment_ATAC-seq_biological replicate 2

text: intestinal epithelial cell

text: intestine


E. coli F18ac_ATAC_Rep3

text: Yangzhou University

text: live

text: Model organism or animal

text: Yangzhou University

text: Sus scrofa

text: E. coli F18ac treatment_ATAC-seq_biological replicate 3

text: intestinal epithelial cell

text: intestine


L. reuteri_E.coli F18ac_ATAC_Rep1

text: Yangzhou University

text: live

text: Model organism or animal

text: Yangzhou University

text: Sus scrofa

text: L. reuteri and E.coli F18ac treatment_ATAC-seq_biological replicate 1

text: intestinal epithelial cell

text: intestine


L. reuteri_E.coli F18ac_ATAC_Rep2

text: Yangzhou University

text: live

text: Model organism or animal

text: Yangzhou University

text: Sus scrofa

text: L. reuteri and E.coli F18ac treatment_ATAC-seq_biological replicate 2

text: intestinal epithelial cell

text: intestine


L. reuteri_E.coli F18ac_ATAC_Rep3

text: Yangzhou University

text: live

text: Model organism or animal

text: Yangzhou University

text: Sus scrofa

text: L. reuteri and E.coli F18ac treatment_ATAC-seq_biological replicate 3

text: intestinal epithelial cell

text: intestine


S. enterica_ATAC_Rep1

text: Yangzhou University

text: live

text: Model organism or animal

text: Yangzhou University

text: Sus scrofa

text: S. enterica treatment_ATAC-seq_biological replicate 1

text: intestinal epithelial cell

text: intestine


S. enterica_ATAC_Rep2

text: Yangzhou University

text: live

text: Model organism or animal

text: Yangzhou University

text: Sus scrofa

text: S. enterica treatment_ATAC-seq_biological replicate 2

text: intestinal epithelial cell

text: intestine


S. enterica_ATAC_Rep3

text: Yangzhou University

text: live

text: Model organism or animal

text: Yangzhou University

text: Sus scrofa

text: S. enterica treatment_ATAC-seq_biological replicate 3

text: intestinal epithelial cell

text: intestine


L. reuteri_S. enterica_ATAC_Rep1

text: Yangzhou University

text: live

text: Model organism or animal

text: Yangzhou University

text: Sus scrofa

text: L. reuteri and S. enterica treatment_ATAC-seq_biological replicate 1

text: intestinal epithelial cell

text: intestine


L. reuteri_S. enterica_ATAC_Rep2

text: Yangzhou University

text: live

text: Model organism or animal

text: Yangzhou University

text: Sus scrofa

text: L. reuteri and S. enterica treatment_ATAC-seq_biological replicate 2

text: intestinal epithelial cell

text: intestine


L. reuteri_S. enterica_ATAC_Rep3

text: Yangzhou University

text: live

text: Model organism or animal

text: Yangzhou University

text: Sus scrofa

text: L. reuteri and S. enterica treatment_ATAC-seq_biological replicate 3

text: intestinal epithelial cell

text: intestine


text: Yangzhou University

text: live

text: Model organism or animal

text: Yangzhou University

text: Sus scrofa

text: Negative control_RNA-seq_biological replicate 1

text: intestinal epithelial cell

text: intestine


text: Yangzhou University

text: live

text: Model organism or animal

text: Yangzhou University

text: Sus scrofa

text: Negative control_RNA-seq_biological replicate 2

text: intestinal epithelial cell

text: intestine


text: Yangzhou University

text: live

text: Model organism or animal

text: Yangzhou University

text: Sus scrofa

text: Negative control_RNA-seq_biological replicate 3

text: intestinal epithelial cell

text: intestine

text: Model organism or animal sample from Sus scrofa


E. coli F18ac_RNA_Rep1

text: Yangzhou University

text: live

text: Model organism or animal

text: Yangzhou University

text: Sus scrofa

text: E. coli F18ac treatment_RNA-seq_biological replicate 1

text: intestinal epithelial cell

text: intestine


E. coli F18ac_RNA_Rep2

text: Yangzhou University

text: live

text: Model organism or animal

text: Yangzhou University

text: Sus scrofa

text: E. coli F18ac treatment_RNA-seq_biological replicate 2

text: intestinal epithelial cell

text: intestine


E. coli F18ac_RNA_Rep3

text: Yangzhou University

text: live

text: Model organism or animal

text: Yangzhou University

text: Sus scrofa

text: E. coli F18ac treatment_RNA-seq_biological replicate 3

text: intestinal epithelial cell

text: intestine


L. reuteri_E.coli F18ac_RNA_Rep1

text: Yangzhou University

text: live

text: Model organism or animal

text: Yangzhou University

text: Sus scrofa

text: L. reuteri and E.coli F18ac treatment_RNA-seq_biological replicate 1

text: intestinal epithelial cell

text: intestine


L. reuteri_E.coli F18ac_RNA_Rep2

text: Yangzhou University

text: live

text: Model organism or animal

text: Yangzhou University

text: Sus scrofa

text: L. reuteri and E.coli F18ac treatment_RNA-seq_biological replicate 2

text: intestinal epithelial cell

text: intestine


L. reuteri_E.coli F18ac_RNA_Rep3

text: Yangzhou University

text: live

text: Model organism or animal

text: Yangzhou University

text: Sus scrofa

text: L. reuteri and E.coli F18ac treatment_RNA-seq_biological replicate 3

text: intestinal epithelial cell

text: intestine


S. enterica_RNA_Rep1

text: Yangzhou University

text: live

text: Model organism or animal

text: Yangzhou University

text: Sus scrofa

text: S. enterica treatment_RNA-seq_biological replicate 1

text: intestinal epithelial cell

text: intestine


S. enterica_RNA_Rep2

text: Yangzhou University

text: live

text: Model organism or animal

text: Yangzhou University

text: Sus scrofa

text: S. enterica treatment_RNA-seq_biological replicate 2

text: intestinal epithelial cell

text: intestine


S. enterica_RNA_Rep3

text: Yangzhou University

text: live

text: Model organism or animal

text: Yangzhou University

text: Sus scrofa

text: S. enterica treatment_RNA-seq_biological replicate 3

text: intestinal epithelial cell

text: intestine


L. reuteri_S. enterica_RNA_Rep1

text: Yangzhou University

text: live

text: Model organism or animal

text: Yangzhou University

text: Sus scrofa

text: L. reuteri and S. enterica treatment_RNA-seq_biological replicate 1

text: intestinal epithelial cell

text: intestine


L. reuteri_S. enterica_RNA_Rep2

text: Yangzhou University

text: live

text: Model organism or animal

text: Yangzhou University

text: Sus scrofa

text: L. reuteri and S. enterica treatment_RNA-seq_biological replicate 2

text: intestinal epithelial cell

text: intestine


L. reuteri_S. enterica_RNA_Rep3

text: Yangzhou University

text: live

text: Model organism or animal

text: Yangzhou University

text: Sus scrofa

text: L. reuteri and S. enterica treatment_RNA-seq_biological replicate 3

text: intestinal epithelial cell

text: intestine


name: Bactrocera neohumeralis isolate Bn135 mitochondrion

text: Western Sydney University

text: live

text: Invertebrate

text: Jane Royer

text: Bactrocera neohumeralis (order:Diptera, family:Tephritidae)

characteristic: description

text: Australia:Mourilyan Harbour

characteristic: isolate

text: Mourilyan Harbour

text: 17.58 S 146.06 E

text: Bactrocera neohumeralis

text: fly abdomen

text: Bactrocera neohumeralis Bn135 mitochondrion


name: Bactrocera neohumeralis isolate Bn240 mitochondrion

text: Western Sydney University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Invertebrate

text: Jane Royer

text: Australia:Mourilyan Harbour

text: Mourilyan Harbour

text: 17.59 S 146.12 E

text: Bactrocera neohumeralis

text: fly abdomen

text: Bactrocera neohumeralis Bn240 mitochondrion


name: Bactrocera neohumeralis isolate Bn244 mitochondrion

text: Western Sydney University

characteristic: INSDC secondary accession

text: live

text: Invertebrate

text: Jane Royer

text: Australia:Cairns

text: Cairns

text: 16.77 S 145.68 E

text: Bactrocera neohumeralis

text: fly abdomen

text: Bactrocera neohumeralis Bn244 mitochondrion

characteristic: title


characteristic: External Id

text: Yunnan Agriculture University

text: live

text: MIMARKS.specimen

text: MIGS/MIMS/MIMARKS.plant-associated

characteristic: collection date

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: Ultisols

text: farmland

text: plant

text: China: Xundian, Kunming

characteristic: geo loc name

text: Zea mays L, Solanum tuberosum L

characteristic: host

text: straw

text: 23.32 N 103.13 E

characteristic: lat lon

text: Pseudomonadota bacterium

text: replicate 1

text: MIMARKS Specimen sample from Pseudomonadota bacterium


text: Yunnan Agriculture University

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: MIMARKS.specimen

characteristic: NCBI submission model

text: MIGS/MIMS/MIMARKS.plant-associated

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: Ultisols

text: farmland

text: plant

text: China: Xundian, Kunming

text: Solanum tuberosum L

text: straw

text: 23.32 N 103.13 E

text: Bacteroidota bacterium

text: replicate 1

text: MIMARKS Specimen sample from Bacteroidota bacterium


text: Yunnan Agriculture University

text: live

text: MIMARKS.specimen

text: MIGS/MIMS/MIMARKS.plant-associated

characteristic: NCBI submission package

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: Ultisols

text: farmland

text: plant

text: China: Xundian, Kunming

text: Zea mays L, Solanum tuberosum L

text: straw

text: 23.32 N 103.13 E

text: Acidobacteriota bacterium

text: replicate 1

text: MIMARKS Specimen sample from Acidobacteriota bacterium


text: Yunnan Agriculture University

text: live

text: MIMARKS.specimen

text: MIGS/MIMS/MIMARKS.plant-associated

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: Ultisols

text: farmland

text: plant

text: China: Xundian, Kunming

text: Zea mays L, Solanum tuberosum L

text: straw

text: 23.32 N 103.13 E

text: Gemmatimonadota bacterium

characteristic: organism

text: replicate 2

characteristic: replicate

text: MIMARKS Specimen sample from Gemmatimonadota bacterium


text: Yunnan Agriculture University

text: live

text: MIMARKS.specimen

text: MIGS/MIMS/MIMARKS.plant-associated

text: Keywords: GSC:MIxS;MIMARKS:6.0

characteristic: description

text: Ultisols

text: farmland

text: plant

text: China: Xundian, Kunming

text: Zea mays L, Solanum tuberosum L

text: straw

text: 23.32 N 103.13 E

text: Spirochaetota bacterium

text: replicate 1

text: MIMARKS Specimen sample from Spirochaetota bacterium


text: Yunnan Agriculture University

characteristic: INSDC first public

text: live

text: MIMARKS.specimen

text: MIGS/MIMS/MIMARKS.plant-associated

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: Ultisols

text: farmland

text: plant

text: China: Xundian, Kunming

text: Zea mays L, Solanum tuberosum L

text: straw

text: 23.32 N 103.13 E

text: Spirochaetota bacterium

text: replicate 2


text: Yunnan Agriculture University

characteristic: INSDC last update

text: live

text: MIMARKS.specimen

text: MIGS/MIMS/MIMARKS.plant-associated

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: Ultisols

text: farmland

text: plant

text: China: Xundian, Kunming

text: Solanum tuberosum L

text: straw

text: 23.32 N 103.13 E

text: Chloroflexota bacterium

text: replicate 3

text: MIMARKS Specimen sample from Chloroflexota bacterium


text: Cardiff University

characteristic: INSDC secondary accession

text: live

text: Human

text: 30 days in vitro

characteristic: age

text: HUES9 iCas9 cell line obtained from Hunagfu D. lab (skiabcf@mskcc.org) and differentiated into MSNs in Li M. lab (lim26@cardiff.ac.uk)

text: HUES9 iCas9

text: control HUES9 iCas9 A

characteristic: isolate

text: Homo sapiens

text: female

characteristic: sex

text: Blastocyst stage

characteristic: tissue

text: Human sample from Homo sapiens


characteristic: External Id

text: Cardiff University

text: live

text: Human

text: 30 days in vitro

text: HUES9 iCas9

text: control HUES9 iCas9 B

text: Homo sapiens

text: female

text: Blastocyst stage

text: Human sample from Homo sapiens

characteristic: title


text: Cardiff University

characteristic: INSDC center name

text: live

text: Human

text: 30 days in vitro

text: HUES9 iCas9

text: control HUES9 iCas9 C

text: Homo sapiens

text: female

text: Blastocyst stage

text: Human sample from Homo sapiens


text: Cardiff University

text: live

characteristic: INSDC status

text: Human

text: 30 days in vitro

text: HUES9 iCas9 cell line obtained from Hunagfu D. lab (skiabcf@mskcc.org), CRISPR edited to knock out BCL11B and differentiated into MSNs in Li M. lab (lim26@cardiff.ac.uk)

text: HUES9 iCas9

text: BCL11B-/- HUES9 iCas9 A

text: Homo sapiens

text: female

text: Blastocyst stage

text: Human sample from Homo sapiens


text: Cardiff University

text: live

text: Human

characteristic: NCBI submission model

text: 30 days in vitro

text: HUES9 iCas9

text: BCL11B-/- HUES9 iCas9 B

text: Homo sapiens

text: female

text: Blastocyst stage

text: Human sample from Homo sapiens


text: Cardiff University

text: live

text: Human

characteristic: NCBI submission package

text: 30 days in vitro

text: HUES9 iCas9

text: BCL11B-/- HUES9 iCas9 C

text: Homo sapiens

text: female

text: Blastocyst stage

text: Human sample from Homo sapiens


text: Cardiff University

text: live

text: Human

characteristic: SRA accession

text: 30 days in vitro

text: HUES9 iCas9 cell line obtained from Hunagfu D. lab (skiabcf@mskcc.org) and differentiated into cortical neurons in Li M. lab (lim26@cardiff.ac.uk)

text: HUES9 iCas9

text: control HUES9 iCas9 A

text: Homo sapiens

text: female

text: Blastocyst stage

text: Human sample from Homo sapiens


text: Cardiff University

text: live

text: Human

text: 30 days in vitro

text: HUES9 iCas9

text: control HUES9 iCas9 B

text: Homo sapiens

characteristic: organism

text: female

text: Blastocyst stage

text: Human sample from Homo sapiens


text: Cardiff University

text: live

text: Human

text: 30 days in vitro

text: HUES9 iCas9

text: control HUES9 iCas9 C

text: Homo sapiens

text: female

text: Blastocyst stage

text: Human sample from Homo sapiens


text: Cardiff University

text: live

text: Human

text: 30 days in vitro

text: HUES9 iCas9 cell line obtained from Hunagfu D. lab (skiabcf@mskcc.org), CRISPR edited to knock out BCL11B and differentiated into cortical in Li M. lab (lim26@cardiff.ac.uk)

text: HUES9 iCas9

text: BCL11B-/- HUES9 iCas9 A

text: Homo sapiens

text: female

text: Blastocyst stage

text: Human sample from Homo sapiens


text: Cardiff University

text: live

text: Human

text: 30 days in vitro

text: HUES9 iCas9

text: BCL11B-/- HUES9 iCas9 B

text: Homo sapiens

text: female

text: Blastocyst stage

text: Human sample from Homo sapiens


text: Cardiff University

text: live

text: Human

text: 30 days in vitro

text: HUES9 iCas9

text: BCL11B-/- HUES9 iCas9 C

text: Homo sapiens

text: female

text: Blastocyst stage

text: Human sample from Homo sapiens


text: Sichuan Agricultural University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: China

characteristic: geo loc name

text: A

characteristic: identified by

text: bacterium

text: stool

characteristic: isolation source

text: Pseudomonadota

characteristic: replicate

text: stool

characteristic: sample type

text: Microbe sample from Pseudomonadota


text: Sichuan Agricultural University

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

text: China

text: B

text: bacterium

characteristic: isolate

text: stool

text: Bacillota

text: stool

text: Microbe sample from Bacillota


characteristic: External Id

text: Sichuan Agricultural University

text: live

text: Microbe, viral or environmental

text: China

text: C

text: bacterium

text: stool

text: Pseudomonadota

text: stool

text: Microbe sample from Pseudomonadota

characteristic: title


text: Sichuan Agricultural University

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: China

text: D

text: bacterium

text: stool

text: Bacillota

text: stool

text: Microbe sample from Bacillota


text: BIOPOLIS/CIBIO-InBIO Research Center in Biodiversity and Genetic Resources

text: live

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Adult

characteristic: age

text: Wildtype

characteristic: breed

text: Domestic

characteristic: ecotype

text: Erythrura psittacea

text: Red Head

characteristic: phenotype

text: male

characteristic: sex

text: blood

characteristic: tissue

text: Model organism or animal sample from Erythrura psittacea


text: live

text: Model organism or animal

characteristic: SRA accession

text: Adult

text: Wildtype

text: Domestic

text: Erythrura psittacea

characteristic: organism

text: Red Head

text: female

text: blood


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Model organism or animal

text: Adult

text: Wildtype

text: Domestic

text: Erythrura psittacea

text: Red Head

text: not determined

text: blood


characteristic: INSDC secondary accession

text: live

text: Model organism or animal

text: Adult

text: Seagreen

text: Domestic

text: Erythrura psittacea

text: Orange Head

text: female

text: blood


characteristic: External Id

text: live

text: Model organism or animal

text: Adult

text: Seagreen

text: Domestic

text: Erythrura psittacea

text: Orange Head

text: male

text: blood


text: live

text: Model organism or animal

text: Adult

text: Seagreen

text: Domestic

text: Erythrura psittacea

text: Orange Head

text: not determined

text: blood

characteristic: title


characteristic: INSDC center name

text: live

text: Model organism or animal

text: Adult

text: Wildtype

text: Domestic

text: Erythrura psittacea

text: Red Head

text: male

text: skin


text: live

characteristic: INSDC status

text: Model organism or animal

text: Adult

text: Seagreen

text: Domestic

text: Erythrura psittacea

text: Orange Head

text: male

text: skin


text: live

text: Model organism or animal

characteristic: NCBI submission model

text: Adult

text: Seagreen

text: Nanopore Genome Sample

characteristic: description

text: Domestic

text: Erythrura psittacea

text: Orange Head

text: male

text: blood

text: Nanopore Orange Genome


text: live

text: Model organism or animal

characteristic: NCBI submission package

text: Adult

characteristic: age

text: Wildtype

text: ONT Full Transcripts-red follicles

text: Domestic

text: Erythrura psittacea

text: Red Head

text: male

text: follicle


text: live

text: Model organism or animal

text: Adult

text: Wildtype

characteristic: breed

text: ONT Full Transcripts-red follicles

text: Domestic

characteristic: ecotype

text: Erythrura psittacea

text: Red Head

text: male

text: follicle


text: live

text: Model organism or animal

text: Adult

text: Seagreen

text: ONT Full Transcripts-orange follicles

text: Domestic

text: Erythrura psittacea

text: Orange Head

characteristic: phenotype

text: male

characteristic: sex

text: follicle


text: live

text: Model organism or animal

characteristic: SRA accession

text: Adult

text: Wildtype

text: ONT Full Transcripts-red retina

text: Domestic

text: Erythrura psittacea

text: Red Head

text: male

text: retina

characteristic: tissue


characteristic: INSDC first public

text: live

text: Model organism or animal

text: Adult

text: Wildtype

text: ONT Full Transcripts-red retina

text: Domestic

text: Erythrura psittacea

characteristic: organism

text: Red Head

text: male

text: retina


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

text: Adult

text: Seagreen

text: ONT Full Transcripts-orange retina

text: Domestic

text: Erythrura psittacea

text: Orange Head

text: male

text: retina


characteristic: External Id

text: Stanford University

text: live

text: Generic

text: CD3+ lymphocytes

characteristic: cell type

text: Homo sapiens

text: MSK 1344

characteristic: patient

characteristic: region

text: tumor

characteristic: title


text: Stanford University

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: CD3+ lymphocytes

text: Homo sapiens

text: MSK 1263

text: adrenal tumor


text: Stanford University

text: live

text: Generic

text: CD3+ lymphocytes

text: Homo sapiens

text: MSK 1263

text: LN

text: lymph node


text: Stanford University

text: live

text: Generic

text: CD3+ lymphocytes

text: Homo sapiens

text: MSK 1263

text: Normal

text: adjacent normal tissue


text: Stanford University

text: live

text: Generic

text: CD3+ lymphocytes

text: Homo sapiens

text: MSK 1263

text: tumor


text: Stanford University

text: live

text: Generic

text: CD3+ lymphocytes

text: Homo sapiens

text: MSK 1302

text: LN

text: lymph node


text: Stanford University

text: live

text: Generic

text: CD3+ lymphocytes

text: Homo sapiens

text: MSK 1302

text: Normal

text: adjacent normal tissue


text: Stanford University

text: live

text: Generic

text: CD3+ lymphocytes

text: Homo sapiens

text: MSK 1302

text: tumor


text: Stanford University

text: live

text: Generic

text: CD3+ lymphocytes

text: Homo sapiens

text: MSK 1344

text: Normal

text: adjacent normal tissue


text: Hebei university

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: China: Baiyangdian

characteristic: geo loc name

text: soil

characteristic: isolation source

text: Lentzea alba

text: genome sequence

characteristic: sample type

characteristic: strain

text: Microbe sample from Lentzea alba


text: Epigenetics and Cell Fates Laboratory, Institute of Molecular and Cell Biology

characteristic: INSDC first public

text: live

text: Generic

characteristic: SRA accession

text: Mus musculus

characteristic: organism

characteristic: sirna


characteristic: External Id

text: Institut für Informatik, Ludwig-Maximilians-Universität München

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: mock

characteristic: agent

text: human fetal foreskin fibroblasts

characteristic: cell type

text: Homo sapiens

text: mock infection, 12h p.i., replicate 1

text: mock

characteristic: time post infection

text: mock infection, 12h p.i., replicate 1 [RNA-Seq]

text: no treatment

characteristic: treatment


characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: mock

text: human fetal foreskin fibroblasts

text: Homo sapiens

text: mock

text: mock infection, 12h p.i., PAA, replicate 1 [RNA-Seq]

characteristic: title

text: PAA (350 microg/ml)


text: live

text: Generic

text: mock

text: human fetal foreskin fibroblasts

text: Homo sapiens

text: mock infection, 8h p.i., replicate 2

text: mock

text: mock infection, 8h p.i., replicate 2 [RNA-Seq]

text: no treatment


text: live

text: Generic

text: mock

text: human fetal foreskin fibroblasts

text: Homo sapiens

text: mock

text: mock infection, 8h p.i., PAA, replicate 2 [RNA-Seq]

text: PAA (350 microg/ml)


text: live

text: Generic

text: Herpes simplex virus 1, strain F

text: human fetal foreskin fibroblasts

text: Homo sapiens

text: 12 hpi

text: WT strain F infection, 12 h p.i. replicate 1 [RNA-Seq]

text: no treatment


text: live

text: Generic

text: Herpes simplex virus 1, strain F

text: human fetal foreskin fibroblasts

text: Homo sapiens

text: 12 hpi

text: WT strain F infection, 12 h p.i. replicate 2 [RNA-Seq]

text: no treatment


text: live

text: Generic

text: Herpes simplex virus 1, strain F

text: human fetal foreskin fibroblasts

text: Homo sapiens

text: 12 hpi

text: WT strain F infection, 12 h p.i., PAA, replicate 1 [RNA-Seq]

text: PAA (350 microg/ml)


text: live

text: Generic

text: Herpes simplex virus 1, strain F

text: human fetal foreskin fibroblasts

text: Homo sapiens

text: 12 hpi

text: WT strain F infection, 12 h p.i., PAA, replicate 2 [RNA-Seq]

text: PAA (350 microg/ml)


text: live

text: Generic

text: Herpes simplex virus 1, strain F

text: human fetal foreskin fibroblasts

text: Homo sapiens

text: 8 hpi

text: WT strain F infection, 8 h p.i. replicate 1 [RNA-Seq]

text: no treatment


text: live

text: Generic

text: Herpes simplex virus 1, strain F

text: human fetal foreskin fibroblasts

text: Homo sapiens

text: 8 hpi

text: WT strain F infection, 8 h p.i., PAA, replicate 1 [RNA-Seq]

text: PAA (350 microg/ml)


text: live

text: Generic

text: Herpes simplex virus 1, strain F

text: human fetal foreskin fibroblasts

text: Homo sapiens

text: 8 hpi

text: WT strain F infection, 8 h p.i., PAA, replicate 2 [RNA-Seq]

text: PAA (350 microg/ml)


text: live

text: Generic

text: Herpes simplex virus 1, strain F

text: human fetal foreskin fibroblasts

text: Homo sapiens

text: 8 hpi

text: WT strain F infection, 8 h p.i. replicate 2 [RNA-Seq]

text: no treatment


text: live

text: Generic

text: no infection

text: Human telomerase reverse transcriptase (hTERT)-Immortalized cell line

text: Homo sapiens

text: no infection

text: HA-ICP22+V5-ICP27 cells, DOX, replicate 1 [RNA-Seq]

text: DOX (5 μg/mL)


text: live

text: Generic

text: no infection

text: Homo sapiens

text: no infection

text: HA-ICP22+V5-ICP27 cells, DOX, replicate 2 [RNA-Seq]

text: DOX (5 μg/mL)


text: live

text: Generic

text: no infection

text: Homo sapiens

text: no infection

text: HA-ICP22 cells, salt stress, no DOX, replicate 1 [RNA-Seq]

text: KCl (80 mM)


text: Institut für Informatik, Ludwig-Maximilians-Universität München

text: live

text: Generic

text: no infection

text: Homo sapiens

text: no infection

text: HA-ICP22 cells, salt stress, no DOX, replicate 2 [RNA-Seq]

text: KCl (80 mM)


text: live

text: Generic

text: no infection

text: Homo sapiens

text: no infection

text: HA-ICP22 cells, salt stress, DOX, replicate 1 [RNA-Seq]

text: DOX (5 μg/mL) + KCl (80 mM)


text: live

text: Generic

text: no infection

text: Homo sapiens

text: no infection

text: HA-ICP22 cells, salt stress, DOX, replicate 2 [RNA-Seq]

text: DOX (5 μg/mL) + KCl (80 mM)


text: live

text: Generic

text: mock

text: human fetal foreskin fibroblasts

text: Homo sapiens

text: mock infection, 12h p.i., replicate 2

text: mock

text: mock infection, 12h p.i., replicate 2 [RNA-Seq]

text: no treatment


text: live

text: Generic

text: mock

text: human fetal foreskin fibroblasts

text: Homo sapiens

text: mock

text: mock infection, 12h p.i., PAA, replicate 2 [RNA-Seq]

text: PAA (350 microg/ml)


text: live

text: Generic

text: no infection

text: Homo sapiens

text: no infection

text: HA-ICP22+V5-ICP27 cells, no DOX, replicate 1 [RNA-Seq]

text: no treatment


text: live

text: Generic

text: no infection

text: Homo sapiens

text: no infection

text: HA-ICP22+V5-ICP27 cells, no DOX, replicate 2 [RNA-Seq]

text: no treatment


text: live

text: Generic

text: ICP22-null mutant of herpes simplex virus 1, strain F

text: human fetal foreskin fibroblasts

text: Homo sapiens

text: 12 hpi

text: ICP22-null infection, 12h p.i., PAA, replicate 1 [RNA-Seq]

text: PAA (350 microg/ml)


text: live

text: Generic

text: human fetal foreskin fibroblasts

text: Homo sapiens

text: 8 hpi

text: ICP22-null infection, 8h p.i., PAA, replicate 1 [RNA-Seq]

text: PAA (350 microg/ml)


text: live

text: Generic

text: human fetal foreskin fibroblasts

text: Homo sapiens

text: 12 hpi

text: ICP22-null infection, 12h p.i., replicate 2 [RNA-Seq]

text: no treatment


text: live

text: Generic

text: human fetal foreskin fibroblasts

text: Homo sapiens

text: 12 hpi

text: ICP22-null infection, 12h p.i., replicate 1 [RNA-Seq]

text: no treatment


text: live

text: Generic

text: human fetal foreskin fibroblasts

text: Homo sapiens

text: 12 hpi

text: ICP22-null infection, 12h p.i., PAA, replicate 2 [RNA-Seq]

text: PAA (350 microg/ml)


text: live

text: Generic

text: human fetal foreskin fibroblasts

text: Homo sapiens

text: 8 hpi

text: ICP22-null infection, 8h p.i., replicate 1 [RNA-Seq]

text: no treatment


text: live

text: Generic

text: human fetal foreskin fibroblasts

text: Homo sapiens

text: 8 hpi

text: ICP22-null infection, 8h p.i.,replicate 2 [RNA-Seq]

text: no treatment


text: live

text: Generic

text: human fetal foreskin fibroblasts

text: Homo sapiens

text: 8 hpi

text: ICP22-null infection, 8h p.i., PAA, replicate 2 [RNA-Seq]

text: PAA (350 microg/ml)


text: Shanghai Institute of Precision Medicine, Ninth People’s Hospital, Shanghai Jiao Tong University School of Medicine

text: live

text: Generic

text: Meckel's cartilage

text: wt

characteristic: genotype

text: Mus musculus

text: chondrocytes

characteristic: strain


characteristic: INSDC first public

text: live

text: Generic

characteristic: SRA accession

text: forelimb

text: wt

text: Mus musculus

text: chondrocytes


text: Molecular Neurosciences, SILS, UvA

text: live

text: Generic

text: C57/Bl6 Pitx3-Cre/+;Dot1l-+/+;Rosa-lox-stop-lox-Yfp

characteristic: genotype/variation

text: Mus musculus

characteristic: organism

text: dissected midbrain DA neurons

text: midbrain dopamine neurons

characteristic: tissue

text: P180 Dot1l-wt1


characteristic: External Id

text: Molecular Neurosciences, SILS, UvA

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Mus musculus

text: dissected midbrain DA neurons

text: midbrain dopamine neurons

text: P180 Dot1l-wt2


text: Molecular Neurosciences, SILS, UvA

text: live

text: Generic

text: Mus musculus

text: dissected midbrain DA neurons

text: midbrain dopamine neurons

text: P180 Dot1l-wt3


text: Molecular Neurosciences, SILS, UvA

text: live

text: Generic

text: C57/Bl6 Pitx3-Cre/+;Dot1l-+/fl;Rosa-lox-stop-lox-Yfp

text: Mus musculus

text: dissected midbrain DA neurons

text: midbrain dopamine neurons

text: P180 Dot1l-Het1


text: Molecular Neurosciences, SILS, UvA

text: live

text: Generic

text: Mus musculus

text: dissected midbrain DA neurons

text: midbrain dopamine neurons

text: P180 Dot1l-Het2


text: Molecular Neurosciences, SILS, UvA

text: live

text: Generic

text: Mus musculus

text: dissected midbrain DA neurons

text: midbrain dopamine neurons

text: P180 Dot1l-Het3


text: Molecular Neurosciences, SILS, UvA

text: live

text: Generic

text: C57/Bl6 Pitx3-Cre/+;Dot1l-fl/fl;Rosa-lox-stop-lox-Yfp

text: Mus musculus

text: dissected midbrain DA neurons

text: midbrain dopamine neurons

text: P180 Dot1l-KO1


text: Molecular Neurosciences, SILS, UvA

text: live

text: Generic

text: Mus musculus

text: dissected midbrain DA neurons

text: midbrain dopamine neurons

text: P180 Dot1l-KO2


text: Molecular Neurosciences, SILS, UvA

text: live

text: Generic

text: Mus musculus

text: dissected midbrain DA neurons

text: midbrain dopamine neurons

text: P180 Dot1l-KO3


text: clinical/research

characteristic: IFSAC+ Category

text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.env

text: environmental/food/other

characteristic: attribute package

characteristic: collection date

text: USA:MD

characteristic: geo loc name

characteristic: isolate

characteristic: ontological term

text: Escherichia coli

text: Escherichia coli


text: University of Chinese Academy of Science

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 26 weeks

characteristic: age

text: Mus musculus

text: replicate = biological replicate 1

characteristic: replicate

text: male

characteristic: sex

text: liver

text: ddah1 flox1

characteristic: title

text: HFD Ddah1 flox

characteristic: treatment


characteristic: External Id

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Model organism or animal

characteristic: SRA accession

text: 26 weeks

text: Mus musculus

characteristic: organism

text: replicate = biological replicate 2

text: male

characteristic: strain

text: liver

characteristic: tissue

text: ddah1 flox2

text: HFD Ddah1 flox


characteristic: INSDC secondary accession

text: live

text: Model organism or animal

text: 26 weeks

characteristic: collection date

text: Mus musculus

text: replicate = biological replicate 3

text: male

text: liver

text: ddah1 flox3

text: HFD Ddah1 flox


characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Model organism or animal

text: 26 weeks

text: Mus musculus

text: replicate = biological replicate 1

text: male

text: liver

text: ddah1 HKO1

text: HFD Ddah1 LKO


text: live

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 26 weeks

text: Mus musculus

text: replicate = biological replicate 2

text: male

text: liver

text: ddah1 HKO2

text: HFD Ddah1 LKO


text: live

text: Model organism or animal

text: 26 weeks

characteristic: age

text: Mus musculus

text: replicate = biological replicate 3

characteristic: replicate

text: male

text: liver

text: ddah1 HKO3

text: HFD Ddah1 LKO


text: live

text: Model organism or animal

text: 26 weeks

text: Mus musculus

text: replicate = biological replicate 1

text: male

characteristic: sex

text: liver

text: WT mice1

characteristic: title

text: HFD Ddah1 WT


characteristic: External Id

text: live

text: Model organism or animal

text: 26 weeks

text: Mus musculus

text: replicate = biological replicate 2

text: male

text: liver

text: WT mice2

text: HFD Ddah1 WT

characteristic: treatment


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Model organism or animal

text: 26 weeks

text: Mus musculus

text: replicate = biological replicate 3

text: male

text: liver

text: WT mice2

text: HFD Ddah1 WT


text: live

text: Model organism or animal

characteristic: SRA accession

text: 26 weeks

text: Mus musculus

characteristic: organism

text: replicate = biological replicate 1

text: male

text: liver

text: HFD Ddah1 TG


text: live

text: Model organism or animal

text: 26 weeks

text: Mus musculus

text: replicate = biological replicate 2

text: male

characteristic: strain

text: liver

characteristic: tissue

text: HFD Ddah1 TG


characteristic: INSDC secondary accession

text: live

text: Model organism or animal

text: 26 weeks

characteristic: collection date

text: Mus musculus

text: replicate = biological replicate 3

text: male

text: liver

text: HFD Ddah1 TG


text: dbGaP

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Generic

text: DNA

characteristic: analyte type

text: GALAII

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Peripheral Blood

characteristic: body site

text: DS-LD-IRB-COL

text: No

characteristic: is tumor

text: Homo sapiens

text: male

text: Case Set

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

text: GALAII

characteristic: submitter handle

text: Non-tumor DNA sample from Peripheral Blood of a human male participant in the dbGaP study NHLBI TOPMed - NHGRI CCDG: Genes-Environments and Admixture in Latino Asthmatics (GALA II)


characteristic: External Id

text: dbGaP

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: DNA

text: GALAII

text: Peripheral Blood

text: DS-LD-IRB-COL

text: No

text: Homo sapiens

characteristic: organism

text: female

characteristic: sex

text: Case Set

text: GALAII

text: Non-tumor DNA sample from Peripheral Blood of a human female participant in the dbGaP study NHLBI TOPMed - NHGRI CCDG: Genes-Environments and Admixture in Latino Asthmatics (GALA II)

characteristic: title


text: dbGaP

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: DNA

characteristic: analyte type

text: GALAII

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Peripheral Blood

text: DS-LD-IRB-COL

text: No

text: Homo sapiens

text: female

text: Case Set

text: NHLBI TOPMed - NHGRI CCDG: Genes-Environments and Admixture in Latino Asthmatics (GALA II)

text: GALAII


text: dbGaP

text: live

text: Generic

text: DNA

text: GALAII

text: Peripheral Blood

characteristic: body site

text: DS-LD-IRB-COL

text: No

characteristic: is tumor

text: Homo sapiens

text: male

text: Case Set

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

text: GALAII


LJBV19 ONT raw data

characteristic: External Id

text: Shanghai Jiao Tong University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: China:Shanghai

characteristic: geo loc name

text: soil

characteristic: isolation source

text: Bacillus sp. (in: firmicutes)

characteristic: sample type

text: Bacillus sp. LJBV19

characteristic: strain


text: fudan university

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: Pacific Ocean: Mariana Trench

text: Abyssibius alkaniclasticus

characteristic: organism

text: pure culture

text: Microbe sample from Abyssibius alkaniclasticus

characteristic: title

text: type strain of Abyssibius alkaniclasticus

characteristic: type-material


Geoglossum cookeanum AXV2JGJCKQ

text: Iridian Genomes

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: USA

text: IRGN 76EX1EQK1U

characteristic: isolate

text: wild collected

text: Geoglossum cookeanum

text: fungal tissue

text: Microbe sample from Geoglossum cookeanum


Geoglossum glabrum NNPHEXTUAN

characteristic: External Id

text: Iridian Genomes

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: USA

text: IRGN 648Z95Z10B

text: fungal tissue

text: Geoglossum glabrum

text: tissue

text: Microbe sample from Geoglossum glabrum


Glutinoglossum americanum NJ5LD2XGHE

text: Iridian Genomes

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: USA

text: IRGN OLEZ0AYKXK

text: fungal tissue

text: Glutinoglossum americanum

text: fungal tissue

text: Microbe sample from Glutinoglossum americanum


text: SYSU

text: live

text: Human

characteristic: NCBI submission package

text: Z Yao

text: no

text: Homo sapiens

text: male

characteristic: sex

text: liver

characteristic: tissue

text: Human sample from Homo sapiens


text: cow

characteristic: IFSAC+ Category

text: CFSAN

text: live

text: Pathogen.env

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: USDA ARS WRRC

characteristic: collected by

characteristic: collection date

text: Escherichia

characteristic: genus

text: USA:CA

characteristic: geo loc name

text: bovine

characteristic: isolation source

characteristic: ontological term

text: Escherichia coli

text: GenomeTrakr

characteristic: project name

text: FDA Center for Food Safety and Applied Nutrition

characteristic: sequenced by

text: animal

characteristic: source type

text: coli

characteristic: species

text: Pathogen: environmental/food/other sample from Escherichia coli


characteristic: External Id

text: Cellular and Molecular Medicine, University of Ottawa

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: Large intestinal cells

characteristic: cell type

text: Mus musculus

characteristic: organism

text: Large intestinal cells

text: Cdx1-/-Cdx2f/f vill (+)

characteristic: strain

text: Mouse large intestinal cells-Cdx2, RNA-seq DKO replicate 1

characteristic: title

text: Tamoxifen treated

characteristic: treatment


text: live

text: Generic

characteristic: NCBI submission package

text: Large intestinal cells

text: Mus musculus

text: Large intestinal cells

text: Cdx1-/-Cdx2f/f vill (+)

text: Mouse large intestinal cells-Cdx2, RNA-seq DKO replicate 2

text: Tamoxifen treated


text: live

text: Generic

text: Large intestinal cells

text: Mus musculus

text: Large intestinal cells

text: Cdx1-/-Cdx2f/f vill (-)

text: Mouse large intestinal cells-Cdx2, RNA-seq Wt replicate 1

text: Tamoxifen treated


text: live

text: Generic

text: Large intestinal cells

text: Mus musculus

text: Large intestinal cells

text: Cdx1-/-Cdx2f/f vill (-)

text: Mouse large intestinal cells-Cdx2, RNA-seq Wt replicate 2

text: Tamoxifen treated


text: live

text: Generic

text: Large intestinal cells

text: Mus musculus

text: Large intestinal cells

text: Cdx1-/-Cdx2f/f vill (-)

text: Mouse large intestinal cells-Cdx2, ChIP-seq Wt

text: untreated


text: live

text: Generic

text: Large intestinal cells

text: Mus musculus

text: Large intestinal cells

text: Cdx1-/-Cdx2f/f vill (+)

text: Mouse large intestinal cells-Cdx2, ATAC-seq DKO replicate 1

text: Tamoxifen treated


text: live

text: Generic

text: Large intestinal cells

text: Mus musculus

text: Large intestinal cells

text: Cdx1-/-Cdx2f/f vill (+)

text: Mouse large intestinal cells-Cdx2, ATAC-seq DKO replicate 2

text: Tamoxifen treated


text: live

text: Generic

text: Large intestinal cells

text: Mus musculus

text: Large intestinal cells

text: Cdx1-/-Cdx2f/f vill (-)

text: Mouse large intestinal cells-Cdx2, ATAC-seq Wt replicate 1

text: Tamoxifen treated


text: live

text: Generic

text: Large intestinal cells

text: Mus musculus

text: Large intestinal cells

text: Cdx1-/-Cdx2f/f vill (-)

text: Mouse large intestinal cells-Cdx2, ATAC-seq Wt replicate 2

text: Tamoxifen treated


text: Stockholm University

text: live

text: Model organism or animal

text: 1.5 - 2 months

characteristic: age

text: NMRI

characteristic: breed

text: total RNA

characteristic: description

text: adult

text: whole brain mice sample

characteristic: isolate

characteristic: keys

text: Mus musculus

text: female

characteristic: sex

text: Brain sample

characteristic: tissue


characteristic: External Id

text: Stockholm University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

text: 1.5 - 2 months

text: NMRI

text: small RNAs

text: adult

text: whole brain mice sample

text: Mus musculus

text: female

text: Brain sample


text: Lund University

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: SRA accession

characteristic: depth

text: water

text: Sweden: Lund

text: eukaryote

text: water

text: not collected

characteristic: mesocosm

text: freshwater metagenome

characteristic: organism

text: Metagenome or environmental sample from freshwater metagenome

text: NEG


text: Lund University

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: water

text: Sweden: Lund

text: eukaryote

text: water

text: not collected

text: freshwater metagenome

characteristic: title

text: HI

characteristic: treatment


text: Lund University

text: live

text: Metagenome or environmental

text: water

text: Sweden: Lund

text: eukaryote

characteristic: isolate

text: water

text: not collected

text: freshwater metagenome

text: I


text: Lund University

text: live

text: Metagenome or environmental

text: water

text: Sweden: Lund

text: eukaryote

text: water

text: not collected

text: freshwater metagenome

text: C


text: Lund University

text: live

text: Metagenome or environmental

text: water

text: Sweden: Lund

text: eukaryote

text: water

text: not collected

text: freshwater metagenome

text: H


text: Lund University

text: live

text: Metagenome or environmental

text: water

text: Germany: Berlin

text: eukaryote

text: water

text: not collected

text: freshwater metagenome

text: InvasionWater


text: Omar Abdel-Wahab Laboratory, Human Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center

text: live

text: Generic

text: DMSO

characteristic: agent

characteristic: cell line

text: Homo sapiens

text: Prostate carcinoma

text: 8 hours

characteristic: time point

text: Total_RNAseq_22Rv1_8hours_DMSO_Replicate1


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: DMSO

text: Homo sapiens

text: Prostate carcinoma

text: 8 hours

text: Total_RNAseq_22Rv1_8hours_DMSO_Replicate2


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: DMSO

text: Homo sapiens

text: Prostate carcinoma

text: 8 hours

text: Total_RNAseq_22Rv1_8hours_DMSO_Replicate3


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Pladienolide B

characteristic: dose

text: Homo sapiens

text: Prostate carcinoma

text: 8 hours

text: Total_RNAseq_22Rv1_8hours_PladienolideB_Replicate1


text: live

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: Pladienolide B

text: Homo sapiens

text: Prostate carcinoma

text: 8 hours

text: Total_RNAseq_22Rv1_8hours_PladienolideB_Replicate2


text: live

text: Generic

text: Pladienolide B

text: Homo sapiens

characteristic: organism

text: Prostate carcinoma

text: 8 hours

text: Total_RNAseq_22Rv1_8hours_PladienolideB_Replicate3


text: live

text: Generic

characteristic: NCBI submission package

text: Homo sapiens

text: Prostate carcinoma

text: 8 hours

text: Total_RNAseq_22Rv1_8hours_WX-02-23_1uM_Replicate1


text: live

text: Generic

text: Homo sapiens

text: Prostate carcinoma

text: 8 hours

text: Total_RNAseq_22Rv1_8hours_WX-02-23_1uM_Replicate2

characteristic: title


text: live

text: Generic

text: Homo sapiens

text: Prostate carcinoma

text: 8 hours

text: Total_RNAseq_22Rv1_8hours_WX-02-23_1uM_Replicate3


text: live

text: Generic

text: Homo sapiens

text: Prostate carcinoma

text: 8 hours

text: Total_RNAseq_22Rv1_8hours_WX-02-23_5uM_Replicate1


text: live

text: Generic

text: Homo sapiens

text: Prostate carcinoma

text: 8 hours

text: Total_RNAseq_22Rv1_8hours_WX-02-23_5uM_Replicate2


text: live

text: Generic

text: Homo sapiens

text: Prostate carcinoma

text: 8 hours

text: Total_RNAseq_22Rv1_8hours_WX-02-23_5uM_Replicate3


text: live

text: Generic

text: Homo sapiens

text: Prostate carcinoma

text: 8 hours

text: Total_RNAseq_22Rv1_8hours_WX-02-43_5uM_Replicate1


text: live

text: Generic

text: Homo sapiens

text: Prostate carcinoma

text: 8 hours

text: Total_RNAseq_22Rv1_8hours_WX-02-43_5uM_Replicate2


text: live

text: Generic

text: Homo sapiens

text: Prostate carcinoma

text: 8 hours

text: Total_RNAseq_22Rv1_8hours_WX-02-43_5uM_Replicate3


text: Peters, La Jolla Institute of Immunology

text: live

text: Generic

text: Classical CD14+CD16- monocytes

characteristic: cell subset

text: TBneg

characteristic: disease group

text: South Africa

characteristic: geographic location

text: Homo sapiens

text: Cryopreserved PBMC


text: live

text: Generic

text: Classical CD14+CD16- monocytes

text: LTBI

text: South Africa

text: Homo sapiens

text: Cryopreserved PBMC


text: live

text: Generic

text: Classical CD14+CD16- monocytes

text: South Africa

text: Homo sapiens

text: Cryopreserved PBMC


text: live

text: Generic

text: Classical CD14+CD16- monocytes

text: LTBI

text: USA: San Diego

text: Homo sapiens

text: Cryopreserved PBMC


text: live

text: Generic

text: Classical CD14+CD16- monocytes

text: TBneg

text: USA: San Diego

text: Homo sapiens

text: Cryopreserved PBMC


text: live

text: Generic

text: Intermediate CD14+CD16+ monocytes

text: South Africa

text: Homo sapiens

text: Cryopreserved PBMC


text: live

text: Generic

text: Intermediate CD14+CD16+ monocytes

text: LTBI

text: South Africa

text: Homo sapiens

text: Cryopreserved PBMC


text: live

text: Generic

text: Intermediate CD14+CD16+ monocytes

text: TBneg

text: South Africa

text: Homo sapiens

text: Cryopreserved PBMC


text: live

text: Generic

text: Classical CD14+CD16- monocytes

text: USA: San Diego

text: Homo sapiens

text: Cryopreserved PBMC


text: live

text: Generic

text: Intermediate CD14+CD16+ monocytes

text: LTBI

text: USA: San Diego

text: Homo sapiens

text: Cryopreserved PBMC


text: live

text: Generic

text: Intermediate CD14+CD16+ monocytes

text: TBneg

text: USA: San Diego

text: Homo sapiens

text: Cryopreserved PBMC


text: live

text: Generic

text: Non-classical CD14-CD16+ monocytes

text: South Africa

text: Homo sapiens

text: Cryopreserved PBMC


text: live

text: Generic

text: Non-classical CD14-CD16+ monocytes

text: LTBI

text: South Africa

text: Homo sapiens

text: Cryopreserved PBMC


text: live

text: Generic

text: Non-classical CD14-CD16+ monocytes

text: TBneg

text: South Africa

text: Homo sapiens

text: Cryopreserved PBMC


text: Virginia Tech

text: live

text: Microbe, viral or environmental

text: Strain STMW3 from Pseudomonas nodulensis

characteristic: description

text: USA: Blacksburg, VA

text: Glycine max

characteristic: host

text: Soybean root nodule

text: Pseudomonas sp. STMW3

text: cell culture

characteristic: strain

text: Pseudomonas nodulensis strain STMW3


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: Non-classical CD14-CD16+ monocytes

text: LTBI

text: USA: San Diego

text: Homo sapiens

text: Cryopreserved PBMC


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: Non-classical CD14-CD16+ monocytes

text: TBneg

text: USA: San Diego

text: Homo sapiens

text: Cryopreserved PBMC


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Non-classical CD14-CD16+ monocytes

text: USA: San Diego

text: Homo sapiens

text: Cryopreserved PBMC


text: Virginia Tech

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: Strain MAMW5 of Pseudomonas moraviensis. It is was one of the most abundant bacteria found in root nodules of some soybean cultivars planted at Virginia Tech's Kentland farm, at Blacksburg, VA.

text: USA: Blacksburg, VA

text: Glycine max

text: Soybean root nodule

text: Pseudomonas moraviensis

text: cell culture

text: Pseudomonas moraviensis strain MAMW5


text: Virginia Tech

text: live

text: Microbe, viral or environmental

text: Strain ORMW6 of Pseudomonas fluorescens. It is wone of the most abundant bacteria, as determined by 16S rRNA OTU abundance, found in root nodules of some soybean cultivars planted at Virginia Tech's Kentland farm, at Blacksburg, VA.

text: USA: Blacksburg, VA

text: Glycine max

text: Soybean root nodule

text: Pseudomonas fluorescens

text: cell culture

text: Pseudomonas fluorescens strain ORMW6


Psylliodes laticollis adult whole body

text: Max Planck Institute for Chemical Ecology

text: live

text: Invertebrate

characteristic: SRA accession

text: Germany: Leutra

text: Nasturtium officinale

text: Psylliodes laticollis

text: whole body

characteristic: tissue

text: Invertebrate sample from Psylliodes laticollis


Psylliodes laticollis adult gut

text: live

text: Invertebrate

characteristic: NCBI submission package

text: Germany: Leutra

text: Nasturtium officinale

text: Psylliodes laticollis

characteristic: organism

text: gut


name: Psylliodes laticollis adult body tissue excluding gut

text: live

text: Invertebrate

text: Germany: Leutra

text: Nasturtium officinale

text: Psylliodes laticollis

text: body tissue excluding gut

characteristic: title


Psylliodes hospes adult whole body

text: live

text: Invertebrate

text: Spain: Las Nieves, La Palma

text: Sinapis sp.

text: Psylliodes hospes

text: whole body

text: Invertebrate sample from Psylliodes hospes


Psylliodes hospes adult gut

text: live

text: Invertebrate

text: Spain: Las Nieves, La Palma

text: Sinapis sp.

text: Psylliodes hospes

text: gut


name: Psylliodes hospes adult body tissue excluding gut

text: live

text: Invertebrate

text: Spain: Las Nieves, La Palma

text: Sinapis sp.

text: Psylliodes hospes

text: body tissue excluding gut


Psylliodes affinis adult whole body

text: live

text: Invertebrate

text: Germany: Plothen

text: Solanum dulcamara

text: Psylliodes affinis

text: whole body

text: Invertebrate sample from Psylliodes affinis


Psylliodes affinis adult gut

text: live

text: Invertebrate

text: Germany: Plothen

text: Solanum dulcamara

text: Psylliodes affinis

text: gut


name: Psylliodes affinis adult body tissue excluding gut

text: live

text: Invertebrate

text: Germany: Plothen

text: Solanum dulcamara

text: Psylliodes affinis

text: body tissue excluding gut


Psylliodes dulcamarae adult whole body

text: live

text: Invertebrate

text: Germany: Plothen

text: Solanum dulcamara

text: Psylliodes dulcamarae

text: whole body

text: Invertebrate sample from Psylliodes dulcamarae


Psylliodes dulcamarae adult gut

text: live

text: Invertebrate

text: Germany: Plothen

text: Solanum dulcamara

text: Psylliodes dulcamarae

text: gut


name: Psylliodes dulcamarae adult body tissue excluding gut

text: live

text: Invertebrate

text: Germany: Plothen

text: Solanum dulcamara

text: Psylliodes dulcamarae

text: body tissue excluding gut


Psylliodes attenuata adult whole body

text: live

text: Invertebrate

text: Germany: Wolnzach

text: Humulus lupulus

text: Psylliodes attenuatus

text: whole body

text: Invertebrate sample from Psylliodes attenuatus


Psylliodes attenuata adult gut

text: live

text: Invertebrate

text: Germany: Wolnzach

text: Humulus lupulus

text: Psylliodes attenuatus

text: gut


name: Psylliodes attenuata adult body tissue excluding gut

text: live

text: Invertebrate

text: Germany: Wolnzach

text: Humulus lupulus

text: Psylliodes attenuatus

text: body tissue excluding gut


name: Psylliodes kiesenwetteri adult whole body

text: live

text: Invertebrate

text: Croatia: Stari Grad

text: Psylliodes kiesenwetteri

text: whole body

text: Invertebrate sample from Psylliodes kiesenwetteri


text: NIH

text: live

text: Generic

text: PBMC

characteristic: cell type

characteristic: day after vaccination

characteristic: individual

text: Homo sapiens

text: PBMC


text: Ntziachristos Lab, Department of Biochemistry and Molecular Genetics, Northwestern University

text: live

text: Generic

characteristic: age

text: Mus musculus

text: Kidney

text: IR-Veh

text: vehicle

characteristic: treatment


characteristic: External Id

text: live

text: Generic

text: Mus musculus

text: Kidney

characteristic: strain


text: Amsterdam UMC (AMC)

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Splenic CD8+ T cells

text: wild-type

characteristic: condition

text: Omni-ATAC protocol

characteristic: library prep

text: Mus musculus

text: Splenic CD8+ T cells

text: WT3 ATAC


text: Amsterdam UMC (AMC)

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Splenic CD8+ T cells

text: wild-type

text: Omni-ATAC protocol

text: Mus musculus

text: Splenic CD8+ T cells

text: WT2 ATAC


text: Amsterdam UMC (AMC)

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Splenic CD8+ T cells

text: wild-type

text: Omni-ATAC protocol

text: Mus musculus

characteristic: organism

text: Splenic CD8+ T cells

text: WT1 ATAC


text: Amsterdam UMC (AMC)

text: live

text: Generic

text: Splenic CD8+ T cells

characteristic: cell type

text: CLL

text: Omni-ATAC protocol

text: Mus musculus

text: Splenic CD8+ T cells

text: CLL4 ATAC

characteristic: title


text: Amsterdam UMC (AMC)

text: live

text: Generic

text: Splenic CD8+ T cells

text: CLL

text: Omni-ATAC protocol

text: Mus musculus

text: Splenic CD8+ T cells

text: CLL3 ATAC


text: Amsterdam UMC (AMC)

text: live

text: Generic

text: Splenic CD8+ T cells

text: CLL

text: Omni-ATAC protocol

text: Mus musculus

text: Splenic CD8+ T cells

text: CLL2 ATAC


text: Amsterdam UMC (AMC)

text: live

text: Generic

text: Splenic CD8+ T cells

text: CLL

text: Omni-ATAC protocol

text: Mus musculus

text: Splenic CD8+ T cells

text: CLL1 ATAC


text: Amsterdam UMC (AMC)

text: live

text: Generic

text: Splenic CD8+ T cells

text: CLL

text: NEBNext Low input RNA library prep

text: Mus musculus

text: Splenic CD8+ T cells

text: CLL10 RNA


text: Amsterdam UMC (AMC)

text: live

text: Generic

text: Splenic CD8+ T cells

text: CLL

text: NEBNext Low input RNA library prep

text: Mus musculus

text: Splenic CD8+ T cells

text: CLL9 RNA


text: Amsterdam UMC (AMC)

text: live

text: Generic

text: Splenic CD8+ T cells

text: CLL

text: NEBNext Low input RNA library prep

text: Mus musculus

text: Splenic CD8+ T cells

text: CLL8 RNA


text: Amsterdam UMC (AMC)

text: live

text: Generic

text: Splenic CD8+ T cells

text: CLL

text: NEBNext Low input RNA library prep

text: Mus musculus

text: Splenic CD8+ T cells

text: CLL7 RNA


text: Amsterdam UMC (AMC)

text: live

text: Generic

text: Splenic CD8+ T cells

text: wild-type

text: NEBNext Low input RNA library prep

text: Mus musculus

text: Splenic CD8+ T cells

text: WT5 RNA


text: Amsterdam UMC (AMC)

text: live

text: Generic

text: Splenic CD8+ T cells

text: wild-type

text: NEBNext Low input RNA library prep

text: Mus musculus

text: Splenic CD8+ T cells

text: WT4 RNA


text: Amsterdam UMC (AMC)

text: live

text: Generic

text: Splenic CD8+ T cells

text: wild-type

text: NEBNext Low input RNA library prep

text: Mus musculus

text: Splenic CD8+ T cells

text: WT2 RNA


text: Amsterdam UMC (AMC)

text: live

text: Generic

text: Splenic CD8+ T cells

text: wild-type

text: NEBNext Low input RNA library prep

text: Mus musculus

text: Splenic CD8+ T cells

text: WT1 RNA


text: University of Alberta

text: live

text: Model organism or animal

text: 24 weeks

characteristic: age

text: Ben Willing, 3-10D Ag/For Centre, Edmonton, AB T6E 2P5, Canada

text: 16S rRNA amplicon sequencing using the MiSeq platform, Ileal contents, 16 weeks after dietary interventions, PBS (Treatment: SC)

characteristic: description

text: Adult

text: Healthy

text: Jackson mice: C57BL/6J

characteristic: isolate

text: Mus musculus

text: biological replicate A11

characteristic: replicate

text: female

characteristic: sex

text: Ileal contents

characteristic: tissue

text: Model organism or animal sample from Mus musculus

text: Standard chow diet


characteristic: External Id

text: University of Alberta

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Model organism or animal

text: 24 weeks

text: Adult

text: Healthy

text: Jackson mice: C57BL/6J

text: Mus musculus

text: biological replicate A12

text: female

text: Ileal contents

text: Standard chow diet

characteristic: treatment


text: University of Alberta

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Model organism or animal

text: 24 weeks

text: Adult

text: Healthy

text: Jackson mice: C57BL/6J

text: Mus musculus

text: biological replicate A13

text: female

text: Ileal contents

text: Standard chow diet


text: University of Alberta

text: live

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: 24 weeks

text: Adult

text: Healthy

text: Jackson mice: C57BL/6J

text: Mus musculus

text: biological replicate A14

text: female

text: Ileal contents

text: Standard chow diet


text: University of Alberta

text: live

text: Model organism or animal

text: 24 weeks

text: Adult

text: Healthy

text: Jackson mice: C57BL/6J

text: Mus musculus

characteristic: organism

text: biological replicate A21

text: female

text: Ileal contents

characteristic: title

text: Standard chow diet


text: University of Alberta

text: live

text: Model organism or animal

text: 24 weeks

characteristic: age

characteristic: description

text: Adult

text: Healthy

text: Jackson mice: C57BL/6J

text: Mus musculus

text: biological replicate A22

text: female

text: Ileal contents

text: Standard chow diet


text: University of Alberta

text: live

text: Model organism or animal

text: 24 weeks

text: Adult

text: Healthy

text: Jackson mice: C57BL/6J

characteristic: isolate

text: Mus musculus

text: biological replicate A23

characteristic: replicate

text: female

text: Ileal contents

text: Standard chow diet


text: University of Alberta

text: live

text: Model organism or animal

text: 24 weeks

text: Adult

text: Healthy

text: Jackson mice: C57BL/6J

text: Mus musculus

text: biological replicate A24

text: female

characteristic: sex

text: Ileal contents

characteristic: tissue

text: Standard chow diet


characteristic: External Id

text: University of Alberta

characteristic: INSDC center name

text: live

text: Model organism or animal

text: 24 weeks

text: 16S rRNA amplicon sequencing using the MiSeq platform, Ileal contents, 16 weeks after dietary interventions, PBS (Treatment: HF)

text: Adult

text: Healthy

text: Jackson mice: C57BL/6J

text: Mus musculus

text: biological replicate B11

text: female

text: Ileal contents

text: High-fat diet


text: University of Alberta

characteristic: INSDC first public

text: live

text: Model organism or animal

text: 24 weeks

text: Adult

text: Healthy

text: Jackson mice: C57BL/6J

text: Mus musculus

text: biological replicate B12

text: female

text: Ileal contents

text: High-fat diet

characteristic: treatment


text: University of Alberta

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

text: 24 weeks

text: Adult

text: Healthy

text: Jackson mice: C57BL/6J

text: Mus musculus

text: biological replicate B13

text: female

text: Ileal contents

text: High-fat diet


text: University of Alberta

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

text: 24 weeks

text: Adult

text: Healthy

text: Jackson mice: C57BL/6J

text: Mus musculus

text: biological replicate B14

text: female

text: Ileal contents

text: High-fat diet


text: University of Alberta

text: live

text: Model organism or animal

characteristic: NCBI submission package

characteristic: SRA accession

text: 24 weeks

text: Adult

text: Healthy

text: Jackson mice: C57BL/6J

text: Mus musculus

text: biological replicate B21

text: female

text: Ileal contents

text: High-fat diet


text: University of Alberta

text: live

text: Model organism or animal

text: 24 weeks

text: Adult

text: Healthy

text: Jackson mice: C57BL/6J

text: Mus musculus

characteristic: organism

text: biological replicate B22

text: female

text: Ileal contents

characteristic: title

text: High-fat diet


text: University of Alberta

text: live

text: Model organism or animal

text: 24 weeks

characteristic: age

characteristic: description

text: Adult

text: Healthy

text: Jackson mice: C57BL/6J

text: Mus musculus

text: biological replicate B23

text: female

text: Ileal contents

text: High-fat diet


text: University of Alberta

text: live

text: Model organism or animal

text: 24 weeks

text: Adult

text: Healthy

text: Jackson mice: C57BL/6J

characteristic: isolate

text: Mus musculus

text: biological replicate B24

characteristic: replicate

text: female

text: Ileal contents

text: High-fat diet


text: University of Alberta

text: live

text: Model organism or animal

text: 24 weeks

text: 16S rRNA amplicon sequencing using the MiSeq platform, Ileal contents, 16 weeks after dietary interventions, E. coli colonization (Treatment: HF_EC)

text: Adult

text: Healthy

text: Jackson mice: C57BL/6J

text: Mus musculus

text: biological replicate C21

text: female

characteristic: sex

text: Ileal contents

characteristic: tissue

text: High-fat diet


characteristic: External Id

text: University of Alberta

characteristic: INSDC center name

text: live

text: Model organism or animal

text: 24 weeks

text: Adult

text: Healthy

text: Jackson mice: C57BL/6J

text: Mus musculus

text: biological replicate C22

text: female

text: Ileal contents

text: High-fat diet


text: University of Alberta

characteristic: INSDC first public

text: live

text: Model organism or animal

text: 24 weeks

text: Adult

text: Healthy

text: Jackson mice: C57BL/6J

text: Mus musculus

text: biological replicate C23

text: female

text: Ileal contents

text: High-fat diet

characteristic: treatment


text: University of Alberta

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

text: 24 weeks

text: Adult

text: Healthy

text: Jackson mice: C57BL/6J

text: Mus musculus

text: biological replicate C24

text: female

text: Ileal contents

text: High-fat diet


text: University of Alberta

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

text: 24 weeks

text: Adult

text: Healthy

text: Jackson mice: C57BL/6J

text: Mus musculus

text: biological replicate D21

text: female

text: Ileal contents

text: High-fat diet


text: University of Alberta

text: live

text: Model organism or animal

characteristic: NCBI submission package

characteristic: SRA accession

text: 24 weeks

text: Adult

text: Healthy

text: Jackson mice: C57BL/6J

text: Mus musculus

text: biological replicate D22

text: female

text: Ileal contents

text: High-fat diet


text: University of Alberta

text: live

text: Model organism or animal

text: 24 weeks

text: Adult

text: Healthy

text: Jackson mice: C57BL/6J

text: Mus musculus

characteristic: organism

text: biological replicate D23

text: female

text: Ileal contents

characteristic: title

text: High-fat diet


text: University of Alberta

text: live

text: Model organism or animal

text: 24 weeks

characteristic: age

characteristic: description

text: Adult

text: Healthy

text: Jackson mice: C57BL/6J

text: Mus musculus

text: biological replicate D24

text: female

text: Ileal contents

text: High-fat diet


text: University of Alberta

text: live

text: Model organism or animal

text: 24 weeks

text: 16S rRNA amplicon sequencing using the MiSeq platform, cecal contents, 16 weeks after dietary interventions, PBS (Treatment: SC)

text: Adult

text: Healthy

text: Jackson mice: C57BL/6J

characteristic: isolate

text: Mus musculus

text: biological replicate A11

characteristic: replicate

text: female

text: Cecal contents

text: Standard chow diet


text: University of Alberta

text: live

text: Model organism or animal

text: 24 weeks

text: Adult

text: Healthy

text: Jackson mice: C57BL/6J

text: Mus musculus

text: biological replicate A12

text: female

characteristic: sex

text: Cecal contents

characteristic: tissue

text: Standard chow diet