text: Portland State University

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: This BioSample is a metagenomic assembly obtained from the hydrothermal vent metagenome BioSample: SAMN12239313

text: deep-sea hydrothermal deposit

text: Pacific Ocean

text: deep-sea hydrothermal deposit

text: 34.8620939 S 179.0573951 E

text: hydrothermal vent metagenome

text: Acidobacteriota bacterium

text: metagenomic assembly


status: PUBLIC

characteristic: External Id

text: Portland State University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

tag: attribute

characteristic: collection date

text: marine hydrothermal vent biome [ENVO:01000030]

text: marine hydrothermal vent [ENVO:01000122]

text: deep-sea hydrothermal deposit

characteristic: environmental sample

text: Pacific Ocean

characteristic: geo loc name

characteristic: isolate

text: deep-sea hydrothermal deposit

characteristic: isolation-source

text: 34.8620939 S 179.0573951 E

characteristic: lat lon

text: hydrothermal vent metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Pseudomonadota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Pseudomonadota bacterium

characteristic: title


text: Portland State University

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: This BioSample is a metagenomic assembly obtained from the hydrothermal vent metagenome BioSample: SAMN12239314

text: deep-sea hydrothermal deposit

text: Pacific Ocean

text: deep-sea hydrothermal deposit

text: 34.86208959 S 179.0573881 E

text: hydrothermal vent metagenome

text: Acidobacteriota bacterium

text: metagenomic assembly

text: Microbe sample from Acidobacteriota bacterium


characteristic: External Id

text: Portland State University

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: deep-sea hydrothermal deposit

text: Pacific Ocean

text: deep-sea hydrothermal deposit

text: 34.86208959 S 179.0573881 E

text: hydrothermal vent metagenome

text: Gemmatimonadota bacterium

text: metagenomic assembly

text: Microbe sample from Gemmatimonadota bacterium


text: Portland State University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: deep-sea hydrothermal deposit

text: Pacific Ocean

text: deep-sea hydrothermal deposit

text: 34.86208959 S 179.0573881 E

text: hydrothermal vent metagenome

text: Nitrospirota bacterium

text: metagenomic assembly

text: Microbe sample from Nitrospirota bacterium


text: Portland State University

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: collection date

text: deep-sea hydrothermal deposit

text: Pacific Ocean

text: deep-sea hydrothermal deposit

text: 34.86208959 S 179.0573881 E

text: hydrothermal vent metagenome

text: Paracoccaceae bacterium

text: metagenomic assembly

text: Microbe sample from Paracoccaceae bacterium


text: Radboud University

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the bioanode metagenome BioSample: SAMN12828209

characteristic: derived from

characteristic: environmental sample

text: Netherlands:Ooijpolder

characteristic: geo loc name

text: biomass on anode of bioreactor after 21 days

characteristic: isolation source

text: 51.862558 N 5.904996 E

text: bioanode metagenome

text: Bacteroidota bacterium

text: metagenomic assembly

characteristic: timepoint

text: Microbe sample from Bacteroidota bacterium


text: dbGaP

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: DS-CVD-MDS

text: Homo sapiens

text: male

characteristic: sex

text: Case-Control

characteristic: study design

characteristic: study name

text: No

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: DNA sample from a human male participant in the dbGaP study Center for Common Disease Genomics [CCDG] - Cardiovascular: Genetics of Coronary Heart Disease - Characterizaton of Coronary Prone Pedigrees


characteristic: External Id

text: Nicola Aceto's Lab, Department of Biomedicine, University of Basel

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: mammary epithelial cells

characteristic: cell type

text: Homo sapiens

characteristic: organism

text: EMT-sensitive

characteristic: resistance

text: HMLE-TWIST1-ER cells, EMT-sensitive, clone 1

characteristic: title

text: 14 days Tamoxifen treatment + 7 days withdrawal

characteristic: treatment


characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: mammary epithelial cells

text: Homo sapiens

text: EMT-resistant

text: HMLE-TWIST1-ER cells, EMT-resistant, clone 1

text: 7 days Tamoxifen treatment


text: live

text: Generic

text: mammary epithelial cells

text: Homo sapiens

text: EMT-resistant

text: HMLE-TWIST1-ER cells, EMT-resistant, clone 2

text: 7 days Tamoxifen treatment


text: live

text: Generic

text: mammary epithelial cells

text: Homo sapiens

text: EMT-sensitive

text: untreated


text: live

text: Generic

text: mammary epithelial cells

text: Homo sapiens

text: EMT-sensitive

text: HMLE-TWIST1-ER cells, EMT-sensitive, clone 2

text: untreated


text: live

text: Generic

text: mammary epithelial cells

text: Homo sapiens

text: EMT-sensitive

text: HMLE-TWIST1-ER cells, EMT-sensitive, clone 3

text: untreated


text: live

text: Generic

text: mammary epithelial cells

text: Homo sapiens

text: EMT-resistant

text: HMLE-TWIST1-ER cells, EMT-resistant, clone 3

text: untreated


text: live

text: Generic

text: mammary epithelial cells

text: Homo sapiens

text: EMT-resistant

text: untreated


text: live

text: Generic

text: mammary epithelial cells

text: Homo sapiens

text: EMT-resistant

text: untreated


text: live

text: Generic

text: mammary epithelial cells

text: Homo sapiens

text: EMT-resistant

text: 7 days Tamoxifen treatment


text: live

text: Generic

text: mammary epithelial cells

text: Homo sapiens

text: EMT-sensitive


text: live

text: Generic

text: mammary epithelial cells

text: Homo sapiens

text: EMT-sensitive


text: live

text: Generic

text: mammary epithelial cells

text: Homo sapiens

text: EMT-resistant


text: live

text: Generic

text: mammary epithelial cells

text: Homo sapiens

text: EMT-resistant


text: live

text: Generic

text: mammary epithelial cells

text: Homo sapiens

text: EMT-resistant


text: live

text: Generic

text: mammary epithelial cells

text: Homo sapiens

text: EMT-sensitive

text: 14 days Tamoxifen treatment


text: live

text: Generic

text: mammary epithelial cells

text: Homo sapiens

text: EMT-sensitive

text: 14 days Tamoxifen treatment


text: live

text: Generic

text: mammary epithelial cells

text: Homo sapiens

text: EMT-sensitive

text: 14 days Tamoxifen treatment


text: live

text: Generic

text: mammary epithelial cells

text: Homo sapiens

text: EMT-resistant

text: 14 days Tamoxifen treatment


text: live

text: Generic

text: mammary epithelial cells

text: Homo sapiens

text: EMT-resistant

text: 14 days Tamoxifen treatment


text: live

text: Generic

text: mammary epithelial cells

text: Homo sapiens

text: EMT-resistant

text: 14 days Tamoxifen treatment


text: live

text: Generic

text: mammary epithelial cells

text: Homo sapiens

text: EMT-sensitive

text: 7 days Tamoxifen treatment


text: live

text: Generic

text: mammary epithelial cells

text: Homo sapiens

text: EMT-sensitive

text: 7 days Tamoxifen treatment


text: live

text: Generic

text: mammary epithelial cells

text: Homo sapiens

text: EMT-sensitive

text: 7 days Tamoxifen treatment


text: live

text: Generic

text: breast cancer cells

text: Patient 1 (ER-)

characteristic: individual

text: Homo sapiens

text: Effusion Patient 1 (BPE7) sorted EpCAM-neg fraction

text: BPE7 RNA-seq EpCAM neg

text: no treatments


text: live

text: Generic

text: breast cancer cells

text: Patient 1 (ER-)

text: Homo sapiens

text: Effusion Patient 1 (BPE7) sorted EpCAM-low fraction

text: BPE7 RNA-seq EpCAM low

text: no treatments


text: live

text: Generic

text: breast cancer cells

text: Patient 1 (ER-)

text: Homo sapiens

text: Effusion Patient 1 (BPE7) sorted EpCAM-high fraction

text: BPE7 RNA-seq EpCAM high

text: no treatments


text: live

text: Generic

text: breast cancer cells

text: Patient 6 (ER+)

text: Homo sapiens

text: Effusion Patient 6 (BPE22) sorted EpCAM-neg fraction

text: BPE22 RNA-seq EpCAM neg

text: no treatments


text: live

text: Generic

text: breast cancer cells

text: Patient 6 (ER+)

text: Homo sapiens

text: Effusion Patient 6 (BPE22) sorted EpCAM-low/neg fraction

text: BPE22 RNA-seq EpCAM low-neg

text: no treatments


text: live

text: Generic

text: breast cancer cells

text: Patient 6 (ER+)

text: Homo sapiens

text: Effusion Patient 6 (BPE22) sorted EpCAM-low fraction

text: BPE22 RNA-seq EpCAM low

text: no treatments


text: live

text: Generic

text: breast cancer cells

text: Patient 6 (ER+)

text: Homo sapiens

text: Effusion Patient 6 (BPE22) sorted EpCAM-high fraction

text: BPE22 RNA-seq EpCAM high

text: no treatments


text: live

text: Generic

text: mammary epithelial cells

text: Homo sapiens

text: EMT-sensitive


text: live

text: Generic

text: mammary epithelial cells

text: Homo sapiens

text: EMT-sensitive


Candidatus Patea custodiens

text: VICTORIA UNIVERSITY WELLINGTON

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: This BioSample is a metagenomic assembly obtained from the sponge metagenome BioSample: SAMN12718690

characteristic: derived-from

characteristic: environmental sample

text: New Zealand: South Island, Marlborough, Capsize Point

characteristic: geo loc name

text: Mycale hentscheli

characteristic: host

characteristic: isolate

text: marine sponge

characteristic: isolation source

text: 41.16 S 173.86 E

characteristic: lat lon

text: sponge metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Kiritimatiellia bacterium

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Kiritimatiellia bacterium


characteristic: External Id

text: VICTORIA UNIVERSITY WELLINGTON

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Mycale hentscheli

text: marine sponge

text: 41.16 S 173.86 E

text: sponge metagenome

text: Paracoccaceae bacterium

characteristic: organism

text: metagenomic assembly

text: Microbe sample from Paracoccaceae bacterium


text: VICTORIA UNIVERSITY WELLINGTON

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: This BioSample is a metagenomic assembly obtained from the sponge metagenome BioSample: SAMN12718692

characteristic: derived-from

characteristic: environmental sample

text: Mycale hentscheli

text: marine sponge

text: 41.16 S 173.86 E

text: sponge metagenome

text: Acidobacteriota bacterium

text: metagenomic assembly

text: Microbe sample from Acidobacteriota bacterium

characteristic: title


B. thailandensis Bp9795

text: Northern Arizona University

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: SRA accession

text: Northern Arizona University

characteristic: collected by

text: Puerto Rico

characteristic: geo loc name

text: water

characteristic: isolation source

text: 18.4 N 66.00 W

text: Burkholderia thailandensis

characteristic: strain

text: Pathogen: environmental/food/other sample from Burkholderia thailandensis


B. thailandensis Bp9920

characteristic: External Id

text: Northern Arizona University

characteristic: INSDC center name

text: live

text: Pathogen.env

text: Northern Arizona University

text: Puerto Rico

text: water

text: 18.32 N 65.65 W

characteristic: lat lon

text: Burkholderia thailandensis


B. thailandensis Bp9942

text: Northern Arizona University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Pathogen.env

text: Northern Arizona University

text: Puerto Rico

text: water

text: 18.47 N 66.12 W

text: Burkholderia thailandensis


text: Earlham Institute

text: live

text: Plant

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Oak Park Ireland

characteristic: biomaterial provider

characteristic: description

text: full plant

characteristic: dev stage

text: TCD P105

characteristic: ecotype

text: Ireland: Carlow

text: Miscanthus sinensis

characteristic: organism

text: leaf

characteristic: tissue

text: Plant sample from Miscanthus sinensis


text: Florida State University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: This BioSample is a metagenomic assembly obtained from the gut metagenome BioSamples: SAMN08875415, SAMN11851957, SAMN11851967, SAMN11852952, SAMN11853059, and SAMN11853144.

characteristic: derived-from

characteristic: environmental sample

text: USA:Florida

characteristic: geo loc name

text: Microtus ochrogaster (prairie vole)

characteristic: host

characteristic: isolate

text: stool from male and female vole

characteristic: isolation-source

text: 30.4449951 N 84.30238270 W

text: gut metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Bacillota bacterium

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Bacillota bacterium

characteristic: title


Bacillus sp. strain SYSU G01002

characteristic: External Id

text: Sun Yat-Sen University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: We sequenced the genome of Bacillus sp. strain SYSU G01002 for further insight into its adaptation and study the phylogeny of Bacillus

text: China

text: Hot spring sediment

characteristic: isolation source

text: Peribacillus tepidiphilus

text: cell culture

text: SYSU G01002

characteristic: strain

text: Microbe sample from Bacillus sp. SYSU G01002

text: type strain of Bacillus tepidiphilus

characteristic: type material


text: dbGaP

text: live

text: Generic

text: CS-MATCH-0007 Arm Y

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: GRU-COL

text: Homo sapiens

characteristic: organism

text: female

characteristic: sex

text: Clinical Trial

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

text: CS-MATCH-0007 Arm Y

characteristic: submitter handle

text: Sample from a human female participant in the dbGaP study Genomic Characterization CS-MATCH-0007 Arm Y


Vibrio sp. type strain CAIM 722T

characteristic: External Id

text: CIAD, A.C.

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: CAIM

characteristic: biomaterial provider

text: Carmen Bolan-Mejia

characteristic: collected by

characteristic: collection date

text: Vibrio sp. type strain CAIM 722T

characteristic: description

text: Mexico:Sinaloa

characteristic: geo loc name

text: water from a shrimp pond

text: 25.1058 N 108.1215 W

characteristic: lat lon

text: Vibrio eleionomae

text: whole organism

characteristic: sample type

text: CAIM 722

text: Vibrio sp. type strain CAIM 722T

characteristic: title

text: type strain of Vibrio eleionomae

characteristic: type-material


name: phosphorous-removal enrichment culture _PR2_Proteobacteria_metagenome

text: Northwestern University

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: This BioSample is a metagenomic assembly obtained from the wastewater metagenome BioSample : SAMN12984379

characteristic: derived-from

characteristic: environmental sample

text: USA

characteristic: isolate

text: CANDO+P Bioreactor

characteristic: isolation-source

text: 42.0578 N 87.676 W

text: wastewater metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Paracoccaceae bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample-type


name: phosphorous-removal enrichment culture _Acc-IF_Accumulibacter_metagenome

characteristic: External Id

text: Northwestern University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: USA

characteristic: geo loc name

text: Acc-IF

text: CANDO+P Bioreactor

text: 42.0578 N 87.676 W

text: wastewater metagenome

text: Paracoccaceae bacterium

text: metagenomic assembly


text: Purdue University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: MISAG.plant-associated

characteristic: SRA accession

text: USA: West Lafayette, IN

characteristic: country

text: Keywords: GSC:MIxS;MISAG:6.0

characteristic: description

text: Farm

text: Agriculture soil

text: Conventional

text: Conventional Carrot

characteristic: isolation source

text: Bacillus sp. (in: firmicutes)

text: MISAG Single Amplified Genome sample from Bacillus sp. (in: firmicutes)

characteristic: title


text: Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: China

text: consortium from agriculture impacted peatlands;ferrihydrate-OC; 0 mg/kg N

characteristic: isolate

text: long-term fertilization

text: Bacillota

text: mixed culture

characteristic: sample type

text: Microbe sample from Bacillota


characteristic: External Id

text: live

text: Microbe, viral or environmental

text: China

text: consortium from agriculture impacted peatlands;ferrihydrate-OC; 1 mg/kg N

text: long-term fertilization

text: Bacillota

characteristic: organism

text: mixed culture

text: Microbe sample from Bacillota


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: China

text: consortium from agriculture impacted peatlands;ferrihydrate-OC; 10 mg/kg N

text: long-term fertilization

text: Pseudomonadota

text: mixed culture

text: Microbe sample from Pseudomonadota


text: live

text: Microbe, viral or environmental

characteristic: collection date

text: China

characteristic: geo loc name

text: consortium from agriculture impacted peatlands;ferrihydrate-OC; 50 mg/kg N

text: long-term fertilization

text: Bacillota

text: mixed culture

text: Microbe sample from Bacillota


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

text: China

text: consortium from agriculture impacted peatlands;ferrihydrate-OC; 100 mg/kg N

text: long-term fertilization

text: Bacillota

text: mixed culture

text: Microbe sample from Bacillota


text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: China

text: consortium from agriculture impacted peatlands;ferrihydrate-OC; 400 mg/kg N

text: long-term fertilization

text: Bacillota

text: mixed culture

text: Microbe sample from Bacillota


text: live

text: Microbe, viral or environmental

text: China

text: consortium from pristine peatland;ferrihydrate-OC; 0 mg/kg N

text: natural peatland

text: Bacillota

text: mixed culture

text: Microbe sample from Bacillota


text: live

text: Microbe, viral or environmental

text: China

text: consortium from pristine peatland;ferrihydrate-OC; 1 mg/kg N

text: natural peatland

text: Pseudomonadota

text: mixed culture

text: Microbe sample from Pseudomonadota


text: live

text: Microbe, viral or environmental

text: China

text: consortium from pristine peatland;ferrihydrate-OC; 10 mg/kg N

text: natural peatland

text: Pseudomonadota

text: mixed culture

text: Microbe sample from Pseudomonadota


text: live

text: Microbe, viral or environmental

text: China

text: consortium from pristine peatland;ferrihydrate-OC; 50 mg/kg N

text: natural peatland

text: Pseudomonadota

text: mixed culture

text: Microbe sample from Pseudomonadota


text: live

text: Microbe, viral or environmental

text: China

text: consortium from pristine peatland;ferrihydrate-OC; 100 mg/kg N

text: natural peatland

text: Bacillota

text: mixed culture

text: Microbe sample from Bacillota


text: live

text: Microbe, viral or environmental

text: China

text: consortium from pristine peatland;ferrihydrate-OC; 400 mg/kg N

text: natural peatland

text: Bacillota

text: mixed culture

text: Microbe sample from Bacillota


text: University of Nottingham

text: live

text: Microbe, viral or environmental

text: Predatory bacteria Venatorbacter ssp. isolate.

characteristic: description

text: United Kingdom: Sutton Bonington

text: cattle slurry

text: Venatoribacter cucullus

text: slurry

characteristic: strain

text: Microbe sample from Venatorbacter ssp.

text: type strain of Venatoribacter cucullus

characteristic: type-material


text: University of Nottingham

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: United Kingdom: Sutton Bonington

text: cattle slurry

characteristic: isolation source

text: Venatoribacter cucullus

text: whole organism

text: Microbe sample from Venatoribacter cucullus

characteristic: title


Eucalyptus salubris

text: Australian National University

text: live

text: Plant

characteristic: NCBI submission model

characteristic: NCBI submission package

text: tree

characteristic: dev stage

text: Australia

characteristic: isolate

text: 35.2784 S 149.1092 E

characteristic: lat lon

text: Eucalyptus sp. ANBG9806169

text: leaf

characteristic: tissue

text: Plant sample from Eucalyptus sp. ANBG9806169


characteristic: External Id

text: Barcelona Supercomputing Center

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: polyA+, stranded, TRUSEQ

text: Microbe, viral or environmental

characteristic: collection date

text: Germany: Jena

text: Nakaseomyces glabratus

characteristic: organism

text: cell culture

characteristic: sample type

text: ATCC 2001

text: Microbe sample from Nakaseomyces glabratus

text: type material of Cryptococcus glabratus


text: Barcelona Supercomputing Center

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: polyA+, stranded, TRUSEQ

text: Microbe, viral or environmental

characteristic: SRA accession

text: human+Candida glabrata

characteristic: description

text: Germany: Jena

characteristic: geo loc name

text: Nakaseomyces glabratus

text: mixed culture

characteristic: strain


text: Barcelona Supercomputing Center

text: live

characteristic: INSDC status

text: polyA+, stranded, TRUSEQ

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 24reseq_human+fungi_infection_12h_cglab_rep1

text: human+Candida glabrata

text: Germany: Jena

text: Nakaseomyces glabratus

text: mixed culture

characteristic: title


text: Barcelona Supercomputing Center

text: live

text: polyA+, stranded, TRUSEQ

text: Microbe, viral or environmental

text: human+Candida glabrata (dead fungi)

text: Germany: Jena

text: Nakaseomyces glabratus

text: mixed culture


text: Laval University

text: live

text: Viral

text: Canada: Kuujjuarapik

text: cyanobacterium

characteristic: host

characteristic: isolate

text: subarctic rock basin lake

characteristic: isolation source

text: 55.27 N 77.73 W

characteristic: lat lon

text: Caudoviricetes

text: Viral sample from Caudoviricetes


characteristic: External Id

text: Purdue University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: 3 months

characteristic: age

characteristic: number of mice

text: Mus musculus

text: male

characteristic: sex

text: tibialis anterior non-injured SM


text: Purdue University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: 3 months

text: Mus musculus

characteristic: organism

text: male

text: tibialis anterior 21 days post CTX injury


text: Purdue University

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: 3 months

text: Mus musculus

text: male

text: tibialis anterior 10 days post CTX injury

characteristic: strain


text: Purdue University

text: live

text: Generic

characteristic: NCBI submission package

text: 3 months

text: Mus musculus

text: male

text: tibialis anterior 5 days post CTX injury

characteristic: title


text: Purdue University

text: live

text: Generic

text: 3 months

text: Mus musculus

text: male

text: tibialis anterior 3.5 days post CTX injury


text: Purdue University

text: live

text: Generic

text: 3 months

text: Mus musculus

text: male

text: tibialis anterior 2 days post CTX injury


text: Purdue University

text: live

text: Generic

text: 3 months

text: Mus musculus

text: male

text: tibialis anterior 0.5 days post CTX injury


text: Chungnam National University

text: live

text: Microbe, viral or environmental

characteristic: collection date

characteristic: depth

text: South Korea: Seonyu island, Okdo-myeon, Gunsan-si, Jeollabuk-do

characteristic: geo loc name

text: mountain soil

characteristic: isolation source

text: 35.812778 N 126.410000 E

text: Agromyces seonyuensis

text: primary

text: cell culture

characteristic: sample type

text: type strain of Agromyces seonyuensis

characteristic: type-material


characteristic: External Id

text: California State University, Los Angeles

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: USA: Los Angeles County

text: surface biocrust without moss

text: 34.38 N 117.6 W

characteristic: lat lon

text: biocrust metagenome

text: MPBio PowerSoil

characteristic: samp mat process

text: 0.42 g


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: USA: Los Angeles County

text: soil below surface biocrust without moss

text: 34.38 N 117.6 W

text: biocrust metagenome

characteristic: organism

text: MPBio PowerSoil

text: 0.39 g


text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: USA: Los Angeles County

text: surface biocrust without moss

text: 34.38 N 117.6 W

text: biocrust metagenome

text: MPBio PowerSoil

text: 0.50 g


text: live

text: Metagenome or environmental

characteristic: collection date

text: USA: Los Angeles County

text: 34.38 N 117.6 W

text: biocrust metagenome

text: MPBio PowerSoil

text: 0.54 g

characteristic: title


text: live

text: Metagenome or environmental

text: USA: Los Angeles County

characteristic: geo loc name

text: surface biocrust without moss

characteristic: isolation source

text: 34.38 N 117.6 W

text: biocrust metagenome

text: MPBio PowerSoil

text: 0.39 g


text: live

text: Metagenome or environmental

text: USA: Los Angeles County

text: hypolithic biocrust with moss

text: 34.38 N 117.6 W

text: biocrust metagenome

text: MPBio PowerSoil

text: 0.36 g


text: live

text: Metagenome or environmental

text: USA: Los Angeles County

text: surface biocrust without moss

text: 34.38 N 117.6 W

text: biocrust metagenome

text: MPBio PowerSoil

text: 0.47 g


text: live

text: Metagenome or environmental

text: USA: Los Angeles County

text: surface biocrust without moss

text: 34.38 N 117.6 W

text: biocrust metagenome

text: MPBio PowerSoil

text: 0.35 g


text: live

text: Metagenome or environmental

text: USA: Los Angeles County

text: surface biocrust with moss

text: 34.38 N 117.6 W

text: biocrust metagenome

text: MPBio PowerSoil

text: 0.44 g


text: live

text: Metagenome or environmental

text: USA: Los Angeles County

text: hypolithic biocrust with moss

text: 34.38 N 117.6 W

text: biocrust metagenome

text: MPBio PowerSoil

text: 0.35 g


text: live

text: Metagenome or environmental

text: USA: Los Angeles County

text: surface biocrust with moss

text: 34.38 N 117.6 W

text: biocrust metagenome

text: MPBio PowerSoil

text: 0.55 g


text: live

text: Metagenome or environmental

text: USA: Los Angeles County

text: soil below surface biocrust with moss

text: 34.38 N 117.6 W

text: biocrust metagenome

text: MPBio PowerSoil

text: 0.34 g


text: live

text: Metagenome or environmental

text: USA: Los Angeles County

text: surface biocrust with moss

text: 34.38 N 117.6 W

text: biocrust metagenome

text: MPBio PowerSoil

text: 0.40 g


text: live

text: Metagenome or environmental

text: USA: Los Angeles County

text: hypolithic biocrust with moss

text: 34.38 N 117.6 W

text: biocrust metagenome

text: MPBio PowerSoil

text: 0.50 g


text: live

text: Metagenome or environmental

text: USA: Los Angeles County

text: soil below hypolithic biocrust with moss

text: 34.38 N 117.6 W

text: biocrust metagenome

text: MPBio PowerSoil

text: 0.36 g


text: live

text: Metagenome or environmental

text: USA: Los Angeles County

text: surface biocrust without moss

text: 34.38 N 117.6 W

text: biocrust metagenome

text: MPBio PowerSoil

text: 0.45 g


text: live

text: Metagenome or environmental

text: USA: Los Angeles County

text: surface biocrust with moss

text: 34.38 N 117.6 W

text: biocrust metagenome

text: MPBio PowerSoil

text: 0.31 g


text: live

text: Metagenome or environmental

text: USA: Los Angeles County

text: soil below surface biocrust with moss

text: 34.38 N 117.6 W

text: biocrust metagenome

text: MPBio PowerSoil

text: 0.43 g


text: live

text: Metagenome or environmental

text: USA: Los Angeles County

text: surface biocrust with moss

text: 34.38 N 117.6 W

text: biocrust metagenome

text: MPBio PowerSoil

text: 0.30 g


text: live

text: Metagenome or environmental

text: USA: Los Angeles County

text: surface biocrust with moss

text: 34.38 N 117.6 W

text: biocrust metagenome

text: MPBio PowerSoil

text: 0.28 g


text: live

text: Metagenome or environmental

text: USA: Los Angeles County

text: hypolithic biocrust with moss

text: 34.38 N 117.6 W

text: biocrust metagenome

text: MPBio PowerSoil

text: 0.45 g


text: live

text: Metagenome or environmental

text: USA: Los Angeles County

text: hypolithic biocrust with moss

text: 34.38 N 117.6 W

text: biocrust metagenome

text: MPBio PowerSoil

text: 0.27 g


text: live

text: Metagenome or environmental

text: USA: Los Angeles County

text: hypolithic biocrust with moss

text: 34.38 N 117.6 W

text: biocrust metagenome

text: MPBio PowerSoil

text: 0.47 g


text: live

text: Metagenome or environmental

text: USA: Los Angeles County

text: hypolithic biocrust without moss

text: 34.38 N 117.6 W

text: biocrust metagenome

text: MPBio PowerSoil

text: 0.45 g


text: live

text: Metagenome or environmental

text: USA: Los Angeles County

text: hypolithic biocrust without moss

text: 34.38 N 117.6 W

text: biocrust metagenome

text: MPBio PowerSoil

text: 0.35 g


text: live

text: Metagenome or environmental

text: USA: Los Angeles County

text: hypolithic biocrust without moss

text: 34.38 N 117.6 W

text: biocrust metagenome

text: MPBio PowerSoil

text: 0.37 g


text: live

text: Metagenome or environmental

text: USA: Los Angeles County

text: hypolithic biocrust without moss

text: 34.38 N 117.6 W

text: biocrust metagenome

text: MPBio PowerSoil

text: 0.47 g


text: live

text: Metagenome or environmental

text: USA: Los Angeles County

text: soil below hypolitic biocrust without moss

text: 34.38 N 117.6 W

text: biocrust metagenome

text: MPBio PowerSoil

text: 0.35 g


text: live

text: Metagenome or environmental

text: USA: Los Angeles County

text: hypolithic biocrust without moss

text: 34.38 N 117.6 W

text: biocrust metagenome

text: MPBio PowerSoil

text: 0.30 g


text: live

text: Metagenome or environmental

text: USA: Los Angeles County

text: 34.38 N 117.6 W

text: biocrust metagenome

text: MPBio PowerSoil

text: 0.48 g


text: live

text: Metagenome or environmental

text: USA: Los Angeles County

text: non-biocrust surface soil

text: 34.38 N 117.6 W

text: biocrust metagenome

text: MPBio PowerSoil

text: 0.42 g


text: live

text: Metagenome or environmental

text: USA: Los Angeles County

text: non-biocrust surface soil

text: 34.38 N 117.6 W

text: biocrust metagenome

text: MPBio PowerSoil

text: 0.35 g


JJGpositive

text: live

text: positivecontrolG

text: Metagenome or environmental

text: ZymoBIOMICS Microbial Community DNA Standard, Zymo Inc.

text: biocrust metagenome

text: positivecontrolG


JJHpositive

text: live

text: positivecontrolH

text: Metagenome or environmental

text: biocrust metagenome

text: positivecontrolH


Todiramphus cinnamominus

text: Iridian Genomes

text: live

text: Model organism or animal

text: Todiramphus cinnamominus

characteristic: description

text: adult

characteristic: dev stage

text: IRGN VPHW7EDBKN

characteristic: isolate

text: Todiramphus cinnamominus

text: tissue

characteristic: tissue

text: Model organism or animal sample from Todiramphus cinnamominus


Todiramphus saurophagus

characteristic: External Id

text: Iridian Genomes

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Model organism or animal

text: Todiramphus saurophagus

text: adult

text: IRGN 2T7VB64F69

text: Todiramphus saurophagus

text: tissue

text: Model organism or animal sample from Todiramphus saurophagus


Catotricha subobsoleta

text: Iridian Genomes

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Invertebrate

text: USA

text: IRGN FBL1L1UB45

text: whole insect

text: Catotricha subobsoleta

text: whole insect

text: Invertebrate sample from Catotricha subobsoleta


Callirhytis valhalla

text: Iridian Genomes

text: live

text: Invertebrate

characteristic: SRA accession

text: Pedro Brandao-Dias Ferriera Pinto

text: USA

text: IRGN NP12KTVNW0

text: whole insect

text: Neuroterus valhalla

characteristic: organism

text: whole insect

text: Invertebrate sample from Neuroterus valhalla


text: University of Colorado, Boulder

text: live

characteristic: INSDC status

text: Plant

characteristic: NCBI submission model

characteristic: age

text: Flowering

text: Russia

text: Mesostemma dichotomum

text: Leaf

text: Plant sample from Mesostemma dichotomum


name: Uncultured Rhodobacteraceae bacterium SP12ARB1 metagenomic assembly

text: University of California, San Diego

text: live

text: MIMAG.host-associated

characteristic: NCBI submission package

characteristic: collection date

text: This BioSample is a metagenomic assembly obtained from the sponge metagenome BioSample:SAMN04939363

text: Lamelodysidea herbacea clade Ia microbiome

text: aquatic biome

text: marine biome

text: marine reef biome

characteristic: environmental sample

text: Guam: Anae Island reef

text: Lamellodysidea herbacea

characteristic: host

text: whole sponge tissue

text: 13.446391 N 144.682388 E

characteristic: lat lon

text: sponge metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Paracoccaceae bacterium

text: metagenomic assembly

characteristic: sample type

text: MIMAG Metagenome-assembled Genome sample from Paracoccaceae bacterium

characteristic: title


name: Uncultured Rhodobacteraceae bacterium SP5ARB1 metagenomic assembly

characteristic: External Id

text: University of California, San Diego

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIMAG.host-associated

text: This BioSample is a metagenomic assembly obtained from the sponge metagenome BioSample:SAMN04939377

characteristic: description

text: aquatic biome

text: marine biome

text: marine reef biome

text: Guam: Piti Bomb Holes

characteristic: geo loc name

text: Lamellodysidea herbacea

characteristic: isolate

text: whole sponge tissue

characteristic: isolation source

text: 13.345738 N 144.638186 E

text: sponge metagenome

text: Paracoccaceae bacterium

text: metagenomic assembly


name: Uncultured Rhodobacteraceae bacterium GM7ARB1 metagenomic assembly

text: University of California, San Diego

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIMAG.host-associated

characteristic: NCBI submission model

text: This BioSample is a metagenomic assembly obtained from the sponge metagenome BioSample:SAMN04939365

text: Lamelodysidea herbacea clade III microbiome

text: aquatic biome

text: marine biome

text: marine reef biome

text: Guam: Pago Bay

text: Lamellodysidea herbacea

text: whole sponge tissue

text: 13.416337 N 144.790192 E

text: sponge metagenome

text: Paracoccaceae bacterium

characteristic: organism

text: metagenomic assembly


name: Uncultured Rhodobacteraceae bacterium GM7ARB2 metagenomic assembly

text: University of California, San Diego

text: live

text: MIMAG.host-associated

characteristic: NCBI submission package

characteristic: collection date

text: aquatic biome

text: marine biome

text: marine reef biome

characteristic: environmental sample

text: Guam: Pago Bay

text: Lamellodysidea herbacea

characteristic: host

text: whole sponge tissue

text: 13.416337 N 144.790192 E

text: sponge metagenome

text: Paracoccaceae bacterium

text: metagenomic assembly


text: Rai Lab, Genomic medicine, MD Anderson Cancer Center

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: glioblastoma stem cell (GSC) line

characteristic: cell type

text: GSC8-18 IDH WT TAZ high Mesenchymal

characteristic: genotype/variation

text: Homo sapiens

text: GSC8-18 IDH WT TAZ high Mesenchymal

text: GSC8-18 IDH WT TAZ high Mesenchymal_Input DNA [GSCS-OO20_G]


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: glioblastoma stem cell (GSC) line

characteristic: chip antibody

text: GSC8-18 IDH WT TAZ high Mesenchymal

text: Homo sapiens

text: GSC8-18 IDH WT TAZ high Mesenchymal

text: GSC8-18 IDH WT TAZ high Mesenchymal_H3K27ac_ChIPseq [GSCS-OO20_C]

characteristic: title


characteristic: INSDC last update

text: live

text: Generic

text: glioblastoma stem cell (GSC) line

text: GSC8-18 IDH WT TAZ low

text: Homo sapiens

text: GSC8-18 IDH WT TAZ low

text: GSC8-18 IDH WT TAZ low_Input DNA [GSCS-8-18_G]


text: live

characteristic: INSDC status

text: Generic

text: glioblastoma stem cell (GSC) line

text: GSC8-18 IDH WT TAZ low

text: Homo sapiens

text: GSC8-18 IDH WT TAZ low

text: GSC8-18 IDH WT TAZ low_H3K27ac_ChIPseq [GSCS-8-18_C]


text: live

text: Generic

characteristic: NCBI submission model

text: glioblastoma stem cell (GSC) line

text: GSC8-11 IDH Mutant TAZ low

text: Homo sapiens

text: GSC8-11 IDH Mutant TAZ low

text: GSC8-11 IDH Mutant TAZ low_Input DNA [GSCS-8-11_G]


text: live

text: Generic

text: glioblastoma stem cell (GSC) line

text: GSC8-11 IDH Mutant TAZ low

text: Homo sapiens

characteristic: organism

text: GSC8-11 IDH Mutant TAZ low

text: GSC8-11 IDH Mutant TAZ low_H3K27ac_ChIPseq [GSCS-8-11_C]


text: live

text: Generic

characteristic: NCBI submission package

text: glioblastoma stem cell (GSC) line

text: GSC11 TAZ S51A

text: Homo sapiens

text: GSC11 TAZ S51A

text: GSC11 TAZ S51A_Input DNA [GSCS-S51A_G]


text: live

text: Generic

text: glioblastoma stem cell (GSC) line

text: GSC11 TAZ S51A

text: Homo sapiens

text: GSC11 TAZ S51A

text: GSC11 TAZ S51A_H3K27ac_ChIPseq [GSCS-S51A_C]


text: live

text: Generic

text: glioblastoma stem cell (GSC) line

text: GSC11 TAZ 4SA

text: Homo sapiens

text: GSC11 TAZ 4SA

text: GSC11 TAZ 4SA_Input DNA [GBMC-GSC3_G]


text: live

text: Generic

text: glioblastoma stem cell (GSC) line

text: GSC11 TAZ 4SA

text: Homo sapiens

text: GSC11 TAZ 4SA

text: GSC11 TAZ 4SA_H3K4me3_ChIPseq [GBMC-GSC3_E]


text: live

text: Generic

text: glioblastoma stem cell (GSC) line

text: GSC11 TAZ 4SA

text: Homo sapiens

text: GSC11 TAZ 4SA

text: GSC11 TAZ 4SA_H3K79me2_ChIPseq [GBMC-GSC3_D]


text: live

text: Generic

text: glioblastoma stem cell (GSC) line

text: GSC11 TAZ 4SA

text: Homo sapiens

text: GSC11 TAZ 4SA

text: GSC11 TAZ 4SA_H3K27ac_ChIPseq [GBMC-GSC3_C]


text: live

text: Generic

text: glioblastoma stem cell (GSC) line

text: GSC11 TAZ 4SA

text: Homo sapiens

text: GSC11 TAZ 4SA

text: GSC11 TAZ 4SA_H3K9me3_ChIPseq [GBMC-GSC3_B]


text: live

text: Generic

text: glioblastoma stem cell (GSC) line

text: GSC11 TAZ 4SA

text: Homo sapiens

text: GSC11 TAZ 4SA

text: GSC11 TAZ 4SA_H3K4me1_ChIPseq [GBMC-GSC3_A]


text: live

text: Generic

text: glioblastoma stem cell (GSC) line

text: GSC11 TAZ WT

text: Homo sapiens

text: GSC11 TAZ WT

text: GSC11 TAZ WT_Input DNA [GBMC-GSC2_G]


text: live

text: Generic

text: glioblastoma stem cell (GSC) line

text: GSC11 TAZ WT

text: Homo sapiens

text: GSC11 TAZ WT

text: GSC11 TAZ WT_H3K4me3_ChIPseq [GBMC-GSC2_E]


text: live

text: Generic

text: glioblastoma stem cell (GSC) line

text: GSC11 TAZ WT

text: Homo sapiens

text: GSC11 TAZ WT

text: GSC11 TAZ WT_H3K79me2_ChIPseq [GBMC-GSC2_D]


text: live

text: Generic

text: glioblastoma stem cell (GSC) line

text: GSC11 TAZ WT

text: Homo sapiens

text: GSC11 TAZ WT

text: GSC11 TAZ WT_H3K27ac_ChIPseq [GBMC-GSC2_C]


text: live

text: Generic

text: glioblastoma stem cell (GSC) line

text: GSC11 TAZ WT

text: Homo sapiens

text: GSC11 TAZ WT

text: GSC11 TAZ WT_H3K9me3_ChIPseq [GBMC-GSC2_B]


text: Rai Lab, Genomic medicine, MD Anderson Cancer Center

text: live

text: Generic

text: glioblastoma stem cell (GSC) line

text: GSC11 TAZ WT

text: Homo sapiens

text: GSC11 TAZ WT

text: GSC11 TAZ WT_H3K4me1_ChIPseq [GBMC-GSC2_A]


text: live

text: Generic

text: glioblastoma stem cell (GSC) line

text: GSC11 Vector

text: Homo sapiens

text: GSC11 Vector

text: GSC11 Vector_Input DNA [GBMC-GSC1_G]


text: live

text: Generic

text: glioblastoma stem cell (GSC) line

text: GSC11 Vector

text: Homo sapiens

text: GSC11 Vector

text: GSC11 Vector_H3K4me3_ChIPseq [GBMC-GSC1_E]


text: live

text: Generic

text: glioblastoma stem cell (GSC) line

text: GSC11 Vector

text: Homo sapiens

text: GSC11 Vector

text: GSC11 Vector_H3K79me2_ChIPseq [GBMC-GSC1_D]


text: live

text: Generic

text: glioblastoma stem cell (GSC) line

text: GSC11 Vector

text: Homo sapiens

text: GSC11 Vector

text: GSC11 Vector_H3K27ac_ChIPseq [GBMC-GSC1_C]


text: live

text: Generic

text: glioblastoma stem cell (GSC) line

text: GSC11 Vector

text: Homo sapiens

text: GSC11 Vector

text: GSC11 Vector_H3K9me3_ChIPseq [GBMC-GSC1_B]


text: live

text: Generic

text: glioblastoma stem cell (GSC) line

text: GSC11 Vector

text: Homo sapiens

text: GSC11 Vector

text: GSC11 Vector_H3K4me1_ChIPseq [GBMC-GSC1_A]


SYSU G01002

text: Sun Yat-Sen University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: China

characteristic: geo loc name

text: Hot spring sediment

characteristic: isolation source

text: Peribacillus tepidiphilus

text: cell culture

characteristic: sample type

text: SYSU G01002

characteristic: strain

text: Microbe sample from Bacillus sp.

text: type strain of Bacillus tepidiphilus

characteristic: type material


Desulfovibrio sp. DSM 106783

text: Leibniz Institute DSMZ

text: live

text: Microbe, viral or environmental

characteristic: alternate id

characteristic: culture collection

text: Germany:Konstanz

text: sewage treatment plant

text: Desulfolutivibrio sulfoxidireducens

text: cell culture

text: DSM 106783

text: Microbe sample from Desulfolutivibrio sulfoxidireducens

text: type material of Desulfolutivibrio sulfoxidireducens

characteristic: type-material


characteristic: External Id

text: Iridian Genomes

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Invertebrate

characteristic: SRA accession

text: USA

text: IRGN GQFSOMNHEM

characteristic: isolate

text: Rhinocypha anisoptera

text: IRGN:GQFSOMNHEM

text: whole insect

characteristic: tissue

text: Invertebrate sample from Rhinocypha anisoptera


Toxicodendron radicans

text: Iridian Genomes

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Plant

characteristic: NCBI submission model

characteristic: NCBI submission package

text: adult

characteristic: dev stage

text: USA: Maryland

text: IRGN YGLDU27GXE

text: Toxicodendron radicans

characteristic: organism

text: leaf

text: Plant sample from Toxicodendron radicans

characteristic: title


Alaus oculatus

text: Iridian Genomes

text: live

text: Invertebrate

characteristic: collection date

text: USA: Tennessee

characteristic: geo loc name

text: IRGN RI92KLCK1P

text: Alaus oculatus

text: whole insect

text: Invertebrate sample from Alaus oculatus


text: Biotechnology, Institute of Molecular and Cell Biology, University of Tartu

text: live

text: Generic

characteristic: cell line

text: bone marrow lymfoblast cells from chronic myelogenous leukemia patient - K562 cells

characteristic: cell type

text: H3K4me3 (07-473, Millipore)

characteristic: chip antibody

text: adult - 53 year female

characteristic: developmental stage

text: Homo sapiens

text: K562 cells


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Generic

text: H3K27me3 (07-449, Millipore)

text: adult - 53 year female

text: Homo sapiens

text: K562 cells


text: Vetmeduni

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: Iran: Bushehr

text: Lates calcarifer

characteristic: host

text: Bacillus sp.- QQ4

characteristic: isolate

text: Intestine of Lates calcarifer

characteristic: isolation source

text: Bacillus sp. (in: firmicutes)

text: Bacterial culture

characteristic: sample type

text: Microbe sample from Bacillus sp. (in: firmicutes)


text: Vetmeduni

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Iran: Bushehr

text: Lates calcarifer

text: Bacillus sp- QQ7

text: Intestine of Lates calcarifer

text: Bacillus sp. (in: firmicutes)

characteristic: organism

text: Bacterial culture

characteristic: title


text: Vetmeduni

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: Iran: Bushehr

characteristic: geo loc name

text: Lates calcarifer

text: Bacillus sp- QQ8

text: Intestine of Lates calcarifer

text: Bacillus sp. (in: firmicutes)

text: Bacterial culture


characteristic: External Id

text: Vetmeduni

text: live

text: Microbe, viral or environmental

text: Iran: Hormozgan

text: Lates calcarifer

text: Bacillus sp- QQ9

text: Intestine of Lates calcarifer

text: Bacillus sp. (in: firmicutes)

text: Bacterial culture


text: Vetmeduni

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: Iran: Hormozgan

text: Lates calcarifer

text: Bacillus sp- QQ10

text: Intestine of Lates calcarifer

text: Bacillus sp. (in: firmicutes)

text: Bacterial culture


text: Shanghai Jiao Tong University

characteristic: INSDC first public

text: live

text: MIMAG

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: description

characteristic: environmental sample

text: Pacific Ocean: Kermadec Trench

text: sediment in Kermadec Trench at 8081 m

text: 34.3456 S 178.1771 W

characteristic: lat lon

text: marine sediment metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Paracoccaceae bacterium

text: metagenomic assembly

characteristic: sample-type

text: MIMAG Metagenome-assembled Genome sample from Paracoccaceae bacterium


text: Shanghai Jiao Tong University

characteristic: INSDC last update

text: live

text: MIMAG

text: Keywords: GSC:MIxS;MIMAG:6.0

text: Pacific Ocean: Kermadec Trench

characteristic: isolate

text: sediment in Kermadec Trench at 8081 m

characteristic: isolation source

text: 34.3456 S 178.1771 W

text: marine sediment metagenome

text: Acidobacteriota bacterium

text: metagenomic assembly

text: MIMAG Metagenome-assembled Genome sample from Acidobacteriota bacterium


text: Shanghai Jiao Tong University

text: live

characteristic: INSDC status

text: MIMAG

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Keywords: GSC:MIxS;MIMAG:6.0

text: Pacific Ocean: Kermadec Trench

text: sediment in Kermadec Trench at 8081 m

text: 34.3456 S 178.1771 W

text: marine sediment metagenome

text: Gemmatimonadota bacterium

text: metagenomic assembly

text: MIMAG Metagenome-assembled Genome sample from Gemmatimonadota bacterium


text: Shanghai Jiao Tong University

text: live

text: MIMAG

characteristic: collection date

text: Keywords: GSC:MIxS;MIMAG:6.0

text: Pacific Ocean: Kermadec Trench

text: sediment in Kermadec Trench at 9177 m

text: 32.8507 S 177.6629 W

text: marine sediment metagenome

text: Paracoccaceae bacterium

characteristic: organism

text: metagenomic assembly

characteristic: title


characteristic: External Id

text: Shanghai Jiao Tong University

characteristic: INSDC center name

text: live

text: MIMAG

text: Keywords: GSC:MIxS;MIMAG:6.0

text: Pacific Ocean: Kermadec Trench

characteristic: geo loc name

text: sediment in Kermadec Trench at 9177 m

text: 32.8507 S 177.6629 W

text: marine sediment metagenome

text: Acidobacteriota bacterium

text: metagenomic assembly


text: Shanghai Jiao Tong University

characteristic: INSDC first public

text: live

text: MIMAG

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: description

characteristic: environmental sample

text: Pacific Ocean: Kermadec Trench

text: sediment in Kermadec Trench at 9177 m

text: 32.8507 S 177.6629 W

text: marine sediment metagenome

text: Gemmatimonadota bacterium

text: metagenomic assembly


text: Shanghai Jiao Tong University

text: live

text: MIMAG

text: Keywords: GSC:MIxS;MIMAG:6.0

text: Pacific Ocean: Mariana Trench

text: sediment in Mariana Trench at 6844 m

text: 12.6311 N 144.7214 E

characteristic: lat lon

text: marine sediment metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Paracoccaceae bacterium

text: metagenomic assembly


text: Shanghai Jiao Tong University

characteristic: INSDC last update

text: live

text: MIMAG

text: Keywords: GSC:MIxS;MIMAG:6.0

text: Pacific Ocean: Mariana Trench

characteristic: isolate

text: sediment in Mariana Trench at 6844 m

text: 12.6311 N 144.7214 E

text: marine sediment metagenome

text: Gemmatimonadota bacterium

text: metagenomic assembly

characteristic: sample-type


text: Shanghai Jiao Tong University

text: live

characteristic: INSDC status

text: MIMAG

characteristic: NCBI submission model

text: Keywords: GSC:MIxS;MIMAG:6.0

text: Pacific Ocean: Mariana Trench

text: sediment in Mariana Trench at 7939 m

characteristic: isolation source

text: 12.4764 N 144.8648 E

text: marine sediment metagenome

text: Acidobacteriota bacterium

text: metagenomic assembly


text: Shanghai Jiao Tong University

text: live

text: MIMAG

characteristic: NCBI submission package

characteristic: collection date

text: Keywords: GSC:MIxS;MIMAG:6.0

text: Pacific Ocean: Mariana Trench

text: sediment in Mariana Trench at 7939 m

text: 12.4764 N 144.8648 E

text: marine sediment metagenome

text: Gemmatimonadota bacterium

characteristic: organism

text: metagenomic assembly


characteristic: External Id

text: Shanghai Jiao Tong University

characteristic: INSDC center name

text: live

text: MIMAG

text: Keywords: GSC:MIxS;MIMAG:6.0

text: Pacific Ocean: Mariana Trench

text: high-pressure enrichment cultures at 123 MPa

text: 11.1950 N 141.8117 E

text: marine sediment metagenome

text: metagenomic assembly

text: MIMAG Metagenome-assembled Genome sample from Rhodococcus sp. (in: high G+C Gram-positive bacteria)

characteristic: title


text: Shanghai Jiao Tong University

characteristic: INSDC first public

text: live

text: MIMAG

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: description

text: Pacific Ocean: Mariana Trench

characteristic: geo loc name

text: high-pressure enrichment cultures at 152 MPa

text: 11.1950 N 141.8117 E

text: marine sediment metagenome

text: Bacillus sp. (in: firmicutes)

text: metagenomic assembly

text: MIMAG Metagenome-assembled Genome sample from Bacillus sp. (in: firmicutes)


text: Shanghai Jiao Tong University

text: live

text: MIMAG

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: environmental sample

text: Pacific Ocean: Mariana Trench

text: 11.1950 N 141.8117 E

characteristic: lat lon

text: marine sediment metagenome

characteristic: metagenome source

text: Rhodococcus sp. (in: high G+C Gram-positive bacteria)

text: metagenomic assembly


text: Institute of Oceanology, Chinese Academy of Sciences

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: China:Dongying

text: Apostichopus japonicus

characteristic: host

text: not collected

characteristic: isolate

text: Paracoccaceae

text: whole organism

characteristic: sample type


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Vagina

characteristic: body site

text: GRU-IRB-PUB

text: Vaginal fluid

characteristic: histological type

text: No

characteristic: is tumor

text: Homo sapiens

text: female

characteristic: sex

text: Cross-Sectional

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Non-tumor DNA sample from Vagina of a human female participant in the dbGaP study The Vaginal Microbiome in Reproductive Age Women


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: DNA

text: Vagina

text: GRU-IRB-PUB

text: Vaginal fluid

text: No

text: Homo sapiens

characteristic: organism

text: female

text: Cross-Sectional

text: The Vaginal Microbiome in Reproductive Age Women

characteristic: title


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Vagina

characteristic: body site

text: GRU-IRB-PUB

text: Vaginal fluid

text: No

text: Homo sapiens

text: female

text: Cross-Sectional


text: College of Fisheries, Huazhong Agricultural University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: China:Wuhan

characteristic: geo loc name

text: Oncorhynchus mykiss

characteristic: host

text: teleost

characteristic: isolate

text: buccal mucusa

characteristic: isolation source

text: Pseudomonadota

text: microorganism

characteristic: sample type

text: Microbe sample from Pseudomonadota


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: China:Wuhan

text: Oncorhynchus mykiss

text: teleost

text: pharynx

text: Pseudomonadota

text: microorganism

text: Microbe sample from Pseudomonadota


text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: China:Wuhan

text: Oncorhynchus mykiss

text: teleost

text: stomach

text: Pseudomonadota

characteristic: organism

text: microorganism

text: Microbe sample from Pseudomonadota

characteristic: title


text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: China:Wuhan

text: Oncorhynchus mykiss

text: teleost

text: foregut

text: Pseudomonadota

text: microorganism

text: Microbe sample from Pseudomonadota


text: live

text: Microbe, viral or environmental

text: China:Wuhan

text: Oncorhynchus mykiss

text: teleost

text: midgut

text: Pseudomonadota

text: microorganism

text: Microbe sample from Pseudomonadota


text: live

text: Microbe, viral or environmental

text: China:Wuhan

text: Oncorhynchus mykiss

text: teleost

text: hindgut

text: Pseudomonadota

text: microorganism

text: Microbe sample from Pseudomonadota


text: Biotechnology Building rm 333, Biomedical Sciences, Cornell University

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: Postnatal day 8

characteristic: age

text: wild type

characteristic: genotype

text: Heterocephalus glaber

text: ovary


text: live

text: Generic

text: Postnatal day 1

text: wild type

text: Heterocephalus glaber

text: ovary


text: live

text: Generic

text: Embryonic day 56

text: wild type

text: Heterocephalus glaber

text: ovary


text: live

text: Generic

text: Postnatal day 90

text: wild type

text: Heterocephalus glaber

text: ovary


text: live

text: Generic

text: Postnatal day 28

text: wild type

text: Heterocephalus glaber

text: ovary


text: University of New South Wales

text: live

text: MIMAG.microbial

characteristic: collection date

characteristic: depth

text: This BioSample is a metagenomic assembly obtained from the microbial mat metagenome BioSample: SAMN13193541

characteristic: derived-from

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: description

characteristic: elev

text: marine biome [ENVO:00000447]

text: hypersaline water environment [ENVO:01001043]

text: environment determined by a biofilm on a saline surface [ENVO:01001056]

characteristic: environmental sample

text: Australia: Shark Bay, Hameline Pool

characteristic: geo loc name

text: microbial mat from hypersaline water environment

text: 25.7834 S 113.2988 E

characteristic: lat lon

text: microbial mat metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Candidatus Omnitrophota bacterium

text: metagenomic assembly

characteristic: sample-type

text: 24.8 deg C

characteristic: temp

text: OP3 (Omnitrophica)


characteristic: External Id

text: University of New South Wales

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIMAG.microbial

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Keywords: GSC:MIxS;MIMAG:6.0

text: marine biome [ENVO:00000447]

text: Australia: Shark Bay, Hameline Pool

characteristic: isolate

characteristic: isolation source

text: 25.7834 S 113.2988 E

text: microbial mat metagenome

text: Elusimicrobiota bacterium

characteristic: organism

text: metagenomic assembly

text: 24.8 deg C

text: Elusimicrobia

characteristic: title


tag: Namespace:DOE Joint Genome Institute

text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Enigmatic life underneath us: genomic analysis of deep subsurface microorganisms

characteristic: description

text: Campylobacterota bacterium

text: SCGC AC-213-F18

characteristic: strain

text: Epsilonproteobacteria bacterium SCGC AC-213-F18


text: DOE Joint Genome Institute

characteristic: INSDC secondary accession

text: live

text: MIGS.ba

characteristic: SRA accession

text: Single cell genome sequencing from the North Pacfic Subtropical Gyre, Station ALOHA

text: Pacific Ocean: North Pacific Subtropical Gyre

characteristic: geo loc name

text: 22.7519 N 158.0075 E

characteristic: lat lon

text: Nitrososphaerota archaeon

text: JGI 01_L6

text: Thaumarchaeota archaeon JGI 01_L6


characteristic: External Id

text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Bacteroidota bacterium

text: SCGC AD-289-E08

text: Bacteroidetes bacterium SCGC AD-289-E08


text: DOE Joint Genome Institute

characteristic: INSDC center name

text: live

text: MIGS.ba

text: Pseudomonadota bacterium

text: SCGC AD-277-L02

text: Proteobacteria bacterium SCGC AD-277-L02


text: DOE Joint Genome Institute

characteristic: INSDC first public

text: live

text: MIGS.ba

text: 22.75 N 157.9833 E

text: Terriglobales bacterium

text: JGI 01_F17_echo

text: Acidobacteriales bacterium JGI 01_F17_echo


text: DOE Joint Genome Institute

characteristic: INSDC last update

text: live

text: MIGS.ba

text: Single cell sequencing of marine microorganism from oxygen minimum zones (OMZs) in the Eastern South Pacific off Chile

text: Pacific Ocean: Eastern South Pacific off Chile

text: 36.45 S 73 W

text: Verrucomicrobiota bacterium

text: SCGC AG-487_G17

text: Verrucomicrobia bacterium SCGC AG-487_G17


text: DOE Joint Genome Institute

text: live

characteristic: INSDC status

text: MIGS.ba

text: 23.0675 N 156.1525 E

text: Acidobacteriota bacterium

text: JGI 01_J9_750m

text: Acidobacteria bacterium JGI 01_J9_750m


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

characteristic: NCBI submission model

text: 22.6858 N 156.0172 E

text: Terriglobales bacterium

text: JGI 01_J19_4000m

text: Acidobacteriales bacterium JGI 01_J19_4000m


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

characteristic: NCBI submission package

text: 22.75 N 157.9833 E

text: Terriglobales bacterium

text: JGI 01_I11_echo

text: Acidobacteriales bacterium JGI 01_I11_echo


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: 36.45 S 73 W

text: Verrucomicrobiota bacterium

text: SCGC AG-487_A21

text: Verrucomicrobia bacterium SCGC AG-487_A21


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: 22.75 N 157.9833 E

text: Gemmatimonadota bacterium

text: JGI 01_D11_echo

text: Gemmatimonadetes bacterium JGI 01_D11_echo


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: 22.75 N 157.9833 E

text: Paracoccaceae bacterium

text: JGI 01_L11_echo

text: Rhodobacteraceae bacterium JGI 01_L11_echo


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: 22.6858 N 156.0172 E

text: Terriglobales bacterium

text: JGI 01_G7_4000m

text: Acidobacteriales bacterium JGI 01_G7_4000m


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: 22.6858 N 156.0172 E

text: Terriglobales bacterium

text: JGI 01_F17_4000m

text: Acidobacteriales bacterium JGI 01_F17_4000m


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Single cell sequencing of marine microorganism from oxygen minimum zones (OMZs) in the Eastern Tropical South Atlantic off Namibia

text: Atlantic Ocean: Eastern Tropical South Atlantic off Namibia

text: 22.3933 S 14.0318 E

text: Verrucomicrobiota bacterium

text: SCGC AG-485_G21

text: Verrucomicrobia bacterium SCGC AG-485_G21


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: 22.3933 S 14.0318 E

text: Verrucomicrobiota bacterium

text: SCGC AG-485_L14

text: Verrucomicrobia bacterium SCGC AG-485_L14


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Single cell genome sequencing from the North Pacfic Subtropical Gyre, Station ALOHA

text: Pacific Ocean: North Pacific Subtropical Gyre

text: 22.6858 N 156.0172 E

text: Terriglobales bacterium

text: JGI 01_D15_4000m

text: Acidobacteriales bacterium JGI 01_D15_4000m


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: 22.6858 N 156.0172 E

text: Terriglobales bacterium

text: JGI 01_I11_4000m

text: Acidobacteriales bacterium JGI 01_I11_4000m


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Enigmatic life underneath us: genomic analysis of deep subsurface microorganisms

text: Pseudomonadota bacterium

text: SCGC AD-274-G20

text: Proteobacteria bacterium SCGC AD-274-G20


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Dark ocean microbial

text: Bacteroidota bacterium

text: SCGC AAA242-P21

text: Bacteroidetes bacterium SCGC AAA242-P21


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Metagenomic and metatranscriptomic analysis of forest soil communities across North America

text: Gemmatimonadota bacterium

text: JGI 000192CP-C02

text: Gemmatimonadetes bacterium JGI 000192CP-C02


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Single cell genome sequencing as part of the Microbial Dark Matter project phase II project

text: Russia: Lake Baikal

text: 53.7598 N 107.9791 E

text: Caldisericota bacterium

text: JGI MDM2 LBsed72-1-H12

text: Caldiserica bacterium JGI MDM2 LBsed72-1-H12


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: 22.6858 N 156.0172 E

text: Gemmatimonadota bacterium

text: JGI 01_D11_4000m

text: Gemmatimonadetes bacterium JGI 01_D11_4000m


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Single cell genome sequencing from Trout Bog Hypolimnion, Wisonsin, USA

text: USA: Wisconsin, Trout Bog Lake

text: 46.041 N 89.686 W

text: Acidobacteriota bacterium

text: Acidobacteria bacterium JGI_MCM14TBH040


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Genome sequencing of freshwater single cell organism from oligotrophic, dystrophic, and eutrophic lakes in Wisconsin, USA to identify new gene functions and dissect carbon cycling metabolisms

text: USA: Sparkling Lake, Wisconsin

text: 46.008 N 89.701 W

text: Armatimonadota bacterium

text: Armatimonadetes bacterium JGI_MCM16SPL002


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: USA: Wisconsin, Trout Bog Lake

text: 46.041 N 89.686 W

text: Acidobacteriota bacterium

text: Acidobacteria bacterium JGI_MCM14TBH018


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: USA: Wisconsin, Trout Bog Lake

text: 46.041 N 89.686 W

text: Verrucomicrobiota bacterium

text: Verrucomicrobia bacterium JGI_MCM14TBH032


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: 22.7519 N 158.0075 E

text: Nitrososphaerota archaeon

text: JGI _01_D19

text: Thaumarchaeota archaeon JGI _01_D19


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: USA: Trout Bog Lake, Wisconsin

text: 46.041 N 89.686 W

text: Verrucomicrobiota bacterium

text: Verrucomicrobia bacterium JGI_MCM16TB033


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: USA: Trout Bog Lake, Wisconsin

text: 46.041 N 89.686 W

text: Bacteroidota bacterium

text: Bacteroidetes bacterium JGI_MCM16TB026


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: USA: Sparkling Lake, Wisconsin

text: 46.008 N 89.701 W

text: Bacteroidota bacterium

text: Bacteroidetes bacterium JGI_MCM16SPL085


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Genome sequencing of single cell organism from freshwater lake in Wisconsin, USA to identify new gene functions and dissect carbon cycling metabolisms

text: USA: Wisconsin, Trout Bog Lake

text: 46.041 N 89.686 W

text: Armatimonadota bacterium

text: Armatimonadetes bacterium JGI_MCM16TB009


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Single cell genome sequencing from Lake Mendota Epilimnion, Wisonsin, USA

text: USA: Wisconsin, Lake Mendota

text: 43.099 N 89.405 W

text: Verrucomicrobiota bacterium

text: Verrucomicrobia bacterium JGI_MCM14ME258


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: USA: Sparkling Lake, Wisconsin

text: 46.008 N 89.701 W

text: Verrucomicrobiota bacterium

text: Verrucomicrobia bacterium JGI_MCM16SPL065


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Single cell genome sequencing from the North Pacfic Subtropical Gyre, Station ALOHA

text: Pacific Ocean: North Pacific Subtropical Gyre

text: 23.0675 N 156.1525 E

text: Chloroflexota bacterium

text: JGI 01_I16_750m

text: Chloroflexi bacterium JGI 01_I16_750m


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: 23.0675 N 156.1525 E

text: Chloroflexota bacterium

text: JGI 01_J20_750m

text: Chloroflexi bacterium JGI 01_J20_750m


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: 22.6617 N 157.9772 E

text: Paracoccaceae bacterium

text: JGI 01_H16

text: Rhodobacteraceae bacterium JGI 01_H16


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: 23.0675 N 156.1525 E

text: Chloroflexota bacterium

text: JGI 01_L16_750m

text: Chloroflexi bacterium JGI 01_L16_750m


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Russia: Lake Baikal

text: 53.7598 N 107.9791 E

text: Caldisericota bacterium

text: JGI MDM2 LBsed72-3-F22

text: Caldiserica bacterium JGI MDM2 LBsed72-3-F22


text: DOE Joint Genome Institute

text: live

text: MIGS.eu

text: Genome sequencing to determine the fate of pyrolyzed carbon in post-fire soils

text: Morchella eximia

text: CBS 144461

text: Morchella eximia CBS 144461


Chloroflexi MAG

text: University of Utah

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: This BioSample is a metagenomic assembly obtained from the hydrothermal vent metagenome BioSample: SAMN13035994

characteristic: derived-from

text: MAG from marine ultramafic hydrothermal vent biome

characteristic: environmental sample

text: Atlantic Ocean:Lost City Hydrothermal Field

characteristic: isolate

text: marine hydrothermal vent chimney

text: 30.124051 N 42.120113 W

text: hydrothermal vent metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Chloroflexota bacterium

text: metagenomic assembly

characteristic: sample-type

text: Microbe sample from Chloroflexota bacterium


text: DOE Joint Genome Institute

characteristic: INSDC secondary accession

text: live

text: MIGS.ba

characteristic: SRA accession

characteristic: culture-collection

text: Genome sequencing as part of The One Thousand Microbial Genomes Phase 4 (KMG IV) project

characteristic: description

text: Microvirga flocculans

characteristic: organism

text: DSM 15743

characteristic: strain

text: Microvirga flocculans DSM 15743

characteristic: title

text: type strain of Microvirga flocculans

characteristic: type-material


characteristic: External Id

text: DOE Joint Genome Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

text: Genome sequencing of Xanthomonas species to study plant-associated saprophytic bacteria and their its in plant health and plant-pathogen interactions

text: Physalis peruviana

characteristic: host

text: Xanthomonas euroxanthea

text: Xanthomonas euroxanthea F2


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

characteristic: NCBI submission package

text: Parageobacillus caldoxylosilyticus

text: DSM 12041

text: Geobacillus caldoxylosilyticus DSM 12041

text: type strain of Saccharococcus caldoxylosilyticus


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Aureimonas phyllosphaerae

text: DSM 25024

text: Aureimonas phyllosphaerae DSM 25024


text: University of New South Wales

text: live

text: MIMAG.microbial

characteristic: collection date

characteristic: depth

text: This BioSample is a metagenomic assembly obtained from the microbial mat metagenome BioSample: SAMN13193541

characteristic: derived-from

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: elev

text: marine biome [ENVO:00000447]

text: hypersaline water environment [ENVO:01001043]

text: environment determined by a biofilm on a saline surface [ENVO:01001056]

characteristic: environmental sample

text: Australia: Shark Bay, Hameline Pool

characteristic: geo loc name

characteristic: isolate

text: Microbial mat

characteristic: isolation source

text: 25.7834 S 113.2988 E

characteristic: lat lon

text: microbial mat metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Candidatus Omnitrophota bacterium

text: metagenomic assembly

characteristic: sample-type

text: Candidatus Omnitrophica


characteristic: External Id

text: University of New South Wales

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIMAG.microbial

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: description

text: marine biome [ENVO:00000447]

text: Australia: Shark Bay, Hameline Pool

text: Microbial mat

text: 25.7834 S 113.2988 E

text: microbial mat metagenome

text: Gemmatimonadota bacterium

characteristic: organism

text: metagenomic assembly

text: Gemmatimonadetes

characteristic: title


text: University of New South Wales

text: live

characteristic: INSDC status

text: MIMAG.microbial

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

characteristic: depth

characteristic: derived-from

text: Keywords: GSC:MIxS;MIMAG:6.0

text: marine biome [ENVO:00000447]

text: Australia: Shark Bay, Hameline Pool

text: Microbial mat

text: 25.7834 S 113.2988 E

text: microbial mat metagenome

text: Spirochaetota bacterium

text: metagenomic assembly

text: Spirochaetes


text: University of New South Wales

text: live

text: MIMAG.microbial

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: elev

text: marine biome [ENVO:00000447]

characteristic: environmental sample

text: Australia: Shark Bay, Hameline Pool

characteristic: geo loc name

characteristic: isolate

text: Microbial mat

characteristic: isolation source

text: 25.7834 S 113.2988 E

characteristic: lat lon

text: microbial mat metagenome

text: Acidobacteriota bacterium

text: metagenomic assembly

text: Acidobacteria


characteristic: External Id

text: Georgia Institute of Technology

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIMAG.sediment

text: This BioSample is a metagenomic assembly obtained from the subsurface metagenome BioSample: SAMN07256343

text: environmental material[ENVO:00010483]

text: marine sediment[ENVO_03000033]

text: methane clathrate[ENVO:01000851]

text: TRUE

text: Pacific Ocean: Eastern North Pacific, ODP site 1244

text: methane hydrate marine sediment

text: 44.586 N 125.120 W

text: subsurface metagenome

characteristic: metagenome source

text: TRUE

characteristic: metagenomic

characteristic: methane

characteristic: nitro

text: Calditrichota bacterium

text: 13 years

text: metagenomic assembly

characteristic: sample type

text: 24.5 mM

characteristic: sulfate

text: MIMAG Metagenome-assembled Genome sample from Calditrichota bacterium


Firmicutes bacterium 1244-F2-H4-B10

text: Georgia Institute of Technology

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIMAG.sediment

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: 8.6 mbsf

characteristic: depth

text: This BioSample is a metagenomic assembly obtained from the subsurface metagenome BioSample: SAMN07256344

characteristic: description

text: environmental material[ENVO:00010483]

text: marine sediment[ENVO_03000033]

text: methane clathrate[ENVO:01000851]

text: TRUE

text: methane hydrate marine sediment

text: 44.586 N 125.120 W

text: subsurface metagenome

text: TRUE

text: Bacillota bacterium

characteristic: organism

text: 13 years

text: metagenomic assembly

text: 1.5 mM

text: MIMAG Metagenome-assembled Genome sample from Bacillota bacterium

characteristic: title


Bacteroidetes bacterium 1244-C3-H4-B19

characteristic: External Id

text: Georgia Institute of Technology

characteristic: INSDC center name

text: live

text: MIMAG.sediment

text: 20.69 mbsf

text: This BioSample is a metagenomic assembly obtained from the subsurface metagenome BioSample: SAMN07256346

characteristic: derived-from

text: environmental material[ENVO:00010483]

text: marine sediment[ENVO_03000033]

text: methane clathrate[ENVO:01000851]

text: TRUE

characteristic: environmental sample

characteristic: geo loc name

characteristic: isolate

text: methane hydrate marine sediment

characteristic: isolation source

text: 44.586 N 125.120 W

characteristic: lat lon

text: subsurface metagenome

text: TRUE

text: Bacteroidota bacterium

text: 13 years

text: metagenomic assembly

text: 0.6 mM

text: MIMAG Metagenome-assembled Genome sample from Bacteroidota bacterium


Firmicutes bacterium 1244-C3-H4-B5

text: Georgia Institute of Technology

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIMAG.sediment

text: 20.69 mbsf

text: environmental material[ENVO:00010483]

text: marine sediment[ENVO_03000033]

text: methane clathrate[ENVO:01000851]

text: TRUE

text: methane hydrate marine sediment

text: 44.586 N 125.120 W

text: subsurface metagenome

characteristic: metagenome source

text: TRUE

characteristic: metagenomic

characteristic: methane

characteristic: nitro

text: Bacillota bacterium

text: 13 years

text: metagenomic assembly

characteristic: sample type

text: 0.6 mM

characteristic: sulfate


microbial diversity

text: Qingdao Agricultural University

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: collection date

text: Bacterial community changes in maize rhizosphere under long-term tillage in lime concretion black soil

characteristic: description

text: China:qingdao

text: soil

characteristic: host

text: Pseudomonadota

characteristic: organism

text: soil

text: Sphingomonas

characteristic: strain

text: Microbe sample from soil

characteristic: title


characteristic: External Id

text: DOE Joint Genome Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIGS.ba

text: Exploring deep biosphere microbes by single-cell DNA sequencing

text: Sweden: Aspo Hard Rock Laboratory

characteristic: geo loc name

text: 57.4344 N 16.66 E

characteristic: lat lon

text: Candidatus Omnitrophota bacterium

text: Candidate division OP3 bacterium JGI_SA12_B12_094


text: DOE Joint Genome Institute

characteristic: INSDC secondary accession

text: live

text: MIGS.ba

text: Sweden: Aspo Hard Rock Laboratory

text: 57.4344 N 16.66 E

text: Candidatus Omnitrophota bacterium

text: Candidate division OP3 bacterium JGI_SA12_H09_065


text: DOE Joint Genome Institute

text: live

characteristic: INSDC status

text: MIGS.ba

text: Genome sequencing of single cell organism from the depths of Africa’s ancient Lake Tanganyika

text: Tanzania: Lake Tanganyika

text: 4.9054 S 29.4853 E

text: Candidatus Omnitrophota bacterium

text: JGI MCMTA15138

text: Candidate division OP3 bacterium JGI MCMTA15138


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

characteristic: NCBI submission model

text: Sweden: Aspo Hard Rock Laboratory

text: 57.4344 N 16.66 E

text: Candidatus Omnitrophota bacterium

text: Candidate division OP3 bacterium JGI_KA33_B06_046


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

characteristic: NCBI submission package

text: Sweden: Aspo Hard Rock Laboratory

text: 57.4344 N 16.66 E

text: Candidatus Omnitrophota bacterium

text: Candidate division OP3 bacterium JGI_SA12_C04_028


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

characteristic: SRA accession

text: Sweden: Aspo Hard Rock Laboratory

text: 57.4344 N 16.66 E

text: Candidatus Omnitrophota bacterium

text: Candidate division OP3 bacterium JGI_KA33_E08_056


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Sweden: Aspo Hard Rock Laboratory

text: 57.4344 N 16.66 E

text: Candidatus Omnitrophota bacterium

text: Candidate division OP3 bacterium JGI_KA33_H05_033


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Sweden: Aspo Hard Rock Laboratory

text: 57.4344 N 16.66 E

text: Candidatus Omnitrophota bacterium

text: Candidate division OP3 bacterium JGI_SA12_H05_033


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Sweden: Aspo Hard Rock Laboratory

text: 57.4344 N 16.66 E

text: Candidatus Omnitrophota bacterium

text: Candidate division OP3 bacterium JGI_KA33_D06_042


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Sweden: Aspo Hard Rock Laboratory

text: 57.4344 N 16.66 E

text: Candidatus Omnitrophota bacterium

text: Candidate division OP3 bacterium JGI_KA33_H03_017


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Sweden: Aspo Hard Rock Laboratory

text: 57.4344 N 16.66 E

text: Candidatus Omnitrophota bacterium

text: Candidate division OP3 bacterium JGI_SA12_F09_069


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Sweden: Aspo Hard Rock Laboratory

text: 57.4344 N 16.66 E

text: Candidatus Omnitrophota bacterium

text: Candidate division OP3 bacterium JGI_SA12_H08_050


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Sweden: Aspo Hard Rock Laboratory

text: 57.4344 N 16.66 E

text: Candidatus Omnitrophota bacterium

text: Candidate division OP3 bacterium JGI_KA33_B02_014


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Sweden: Aspo Hard Rock Laboratory

text: 57.4344 N 16.66 E

text: Candidatus Omnitrophota bacterium

text: Candidate division OP3 bacterium JGI_KA33_C08_060


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Sweden: Aspo Hard Rock Laboratory

text: 57.4344 N 16.66 E

text: Candidatus Omnitrophota bacterium

text: Candidate division OP3 bacterium JGI_SA12_F08_054


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Exploring deep biosphere microbes by single-cell DNA sequencing

text: Sweden: Aspo Hard Rock Laboratory

text: 57.4344 N 16.66 E

text: Candidatus Omnitrophota bacterium

text: Candidate division OP3 bacterium JGI_SA12_C09_075


text: DOE Joint Genome Institute

text: live

text: MIGS.ba

text: Enigmatic life underneath us: genomic analysis of deep subsurface microorganisms

text: Bacteroidota bacterium

text: SCGC AD-154-P11

text: Bacteroidetes bacterium SCGC AD-154-P11


Agrobacterium pusense CNPSo 3352

text: Empresa Brasileira de Pesquisa Agropecuaria

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: Mozambique

text: Glycine max

text: nodules

characteristic: isolation source

text: Agrobacterium pusense

text: cell culture

characteristic: sample type

text: CNPSo 3352

text: Microbe sample from Agrobacterium pusense


UBA8848 genome recovered from SRX200676

text: The University of Queensland

text: live

text: MIMAG

text: CLC de novo assembler

characteristic: assembly method

text: not available

text: This BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: SRR606249

characteristic: derived-from

text: Uncultivated genome recovered from an assembly of the SRX200676 metagenome.

characteristic: description

text: not available

text: not available

text: not available

text: True

characteristic: environmental sample

text: not available

characteristic: isolate

text: not available

text: not available

text: BWA (BWA-MEM)

text: not available

characteristic: metagenome source

text: True

characteristic: metagenomic

text: Candidatus Aciduliprofundum boonei

characteristic: organism

text: CheckM


characteristic: External Id

text: shandong university

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIGS.ba

characteristic: depth

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: elev

text: China:Weihai City, Shandong Province

characteristic: geo loc name

text: marine 2216E

text: 38.98 N 77.11 E

characteristic: lat lon

text: Spiribacter salilacus

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Spiribacter salilacus

characteristic: title

text: type strain of Spiribacter salilacus

characteristic: type-material


ITEM 17296

text: Institute of Sciences of Food Production (ISPA)

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Italy

text: Chicorium endivia

characteristic: host

text: ready to eat vegetable

text: 41.06 N 16.52 E

text: Pseudomonas sp. ITEM 17296

text: cell culture

text: ITEM 17296

text: Microbe sample from Pseudomonas sp. ITEM 17296


text: dbGaP

text: live

text: Generic

text: CS-MATCH-0007 Arm Q

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: GRU-COL

text: Homo sapiens

text: female

characteristic: sex

text: Clinical Trial

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

text: CS-MATCH-0007 Arm Q

characteristic: submitter handle

text: Sample from a human female participant in the dbGaP study Genomic Characterization CS-MATCH-0007 Arm Q


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: CS-MATCH-0007 Arm Q

text: GRU-COL

text: Homo sapiens

characteristic: organism

text: female

text: Clinical Trial

text: Genomic Characterization CS-MATCH-0007 Arm Q

text: CS-MATCH-0007 Arm Q


text: dbGaP

text: live

characteristic: INSDC status

text: Generic

text: CS-MATCH-0007 Arm Q

text: GRU-COL

text: Homo sapiens

text: male

text: Clinical Trial

text: CS-MATCH-0007 Arm Q

text: Sample from a human male participant in the dbGaP study Genomic Characterization CS-MATCH-0007 Arm Q

characteristic: title


text: environmental-water

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: UNAB

characteristic: collected by

characteristic: collection date

text: Salmonella

characteristic: genus

text: Chile

characteristic: geo loc name

text: canal water

characteristic: isolation source

text: canal:ENVO_00000014 | water:CHEBI_15377

characteristic: ontological term

text: Salmonella enterica

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: environmental

characteristic: source type

text: enterica

characteristic: species

characteristic: strain

text: Pathogen: environmental/food/other sample from Salmonella enterica


characteristic: External Id

text: environmental-water

characteristic: IFSAC+ Category

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

text: environmental/food/other

text: UNAB

text: Salmonella

text: Chile

text: river water

text: river water:ENVO_01000599

text: Salmonella enterica

characteristic: organism

text: GenomeTrakr

text: environmental

text: enterica

characteristic: title


text: environmental-water

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: ProjectAccession

characteristic: PublicAccession

characteristic: SRA accession

text: environmental/food/other

text: INTA

characteristic: collected by

characteristic: collection date

text: Salmonella

characteristic: genus

text: Chile

characteristic: geo loc name

text: river water

text: river water:ENVO_01000599

text: Salmonella enterica

text: GenomeTrakr

text: environmental

text: enterica


characteristic: External Id

text: environmental-water

characteristic: IFSAC+ Category

text: live

text: Pathogen.env

text: environmental/food/other

text: INTA

text: Salmonella

text: Chile

text: canal water

characteristic: isolation source

text: canal:ENVO_00000014 | water:CHEBI_15377

characteristic: ontological term

text: Salmonella enterica

text: GenomeTrakr

characteristic: project name

characteristic: sequenced by

text: environmental

characteristic: source type

text: enterica

characteristic: species

characteristic: strain


text: environmental

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: INTA

text: Salmonella

text: Chile

text: creek water

text: tidal creek:ENVO_00000041

text: Salmonella enterica

characteristic: organism

text: GenomeTrakr

text: environmental

text: enterica

characteristic: title


characteristic: External Id

text: University of Florida

text: live

text: Plant

characteristic: SRA accession

text: adult

characteristic: dev stage

text: China

characteristic: geo loc name

text: Liquidambar siamensis

text: Gaoligong Shan expedition 1997 18235 (E)

characteristic: specimen voucher

text: leaf

characteristic: tissue


YIM 103518 draft genome

text: Yunnan University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: China

text: feces

characteristic: isolation source

text: Acinetobacter faecalis

text: cell culture

characteristic: sample type

text: YIM 103518

text: Microbe sample from Acinetobacter faecalis

text: type strain of Acinetobacter faecalis

characteristic: type-material


text: DOE Joint Genome Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIGS.ba

text: Single cell sequencing of marine microorganism from oxygen minimum zones (OMZs) in the Eastern South Pacific off Chile

characteristic: description

text: Pacific Ocean: Eastern South Pacific off Chile

text: 36.45 S 73 W

characteristic: lat lon

text: Candidatus Poseidoniales archaeon

text: SCGC AG-487_M08

characteristic: strain

text: Marine group II.A Euryarchaeota archaeon SCGC AG-487_M08


text: DOE Joint Genome Institute

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Single cell genome sequencing from the North Pacfic Subtropical Gyre, Station ALOHA

text: Pacific Ocean: North Pacific Subtropical Gyre

text: 22.6617 N 157.9772 E

text: Pseudobdellovibrionaceae bacterium

characteristic: organism

text: JGI 01_L13

text: Bdellovibrionaceae OM27 bacterium JGI 01_L13

characteristic: title


characteristic: External Id

text: Novitch Lab, Department of Neurobiology, University of California, Los Angeles

text: live

text: Generic

characteristic: SRA accession

text: XFiPSC

characteristic: cell line

text: Yes

characteristic: feeder

text: No

characteristic: feeder-free

text: mouse embryonic fibroblast-supported conditions (Millipore, PMEF-CF)

characteristic: mef details

text: total RNA (rRNA depleted/Ribo-Zero)

characteristic: molecule subtype

characteristic: normalized name

text: Homo sapiens

characteristic: raw counts name

text: XFiPSC


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: XFiPSC

text: No

text: Yes

text: maintained with mTeSRTM1 (Stemcell Technologies, 85850) or Essential 8 medium (E8, ThermoFisher, A15117001) and where specified on hESC-qualified Matrigel substrate (Fisher Scientific, 08-774-552)

characteristic: feeder-free details

text: total RNA (rRNA depleted/Ribo-Zero)

text: Homo sapiens

text: XFiPSC


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: No

text: Yes

text: total RNA (rRNA depleted/Ribo-Zero)

text: Homo sapiens


text: live

text: Generic

characteristic: NCBI submission package

text: Yes

text: No

text: total RNA (rRNA depleted/Ribo-Zero)

text: Homo sapiens

characteristic: organism

characteristic: title


name: Genome assembly of Indian tea TV1 (Camellia assamica)

characteristic: External Id

text: National Institute for Plant Biotechnology, Pusa, IARI Campus, New Delhi-110012, India.

text: live

text: Plant

characteristic: cultivar

text: Young

characteristic: dev stage

text: India: Assam, Jorhat

characteristic: geo loc name

text: Camellia sinensis var. assamica

text: Leaves

characteristic: tissue

text: Plant sample from Camellia sinensis var. assamica

text: assamica

characteristic: variety


text: Lanzhou University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: China

text: mountain soil

characteristic: isolation source

text: Paenibacillus monticola

text: cell culture

characteristic: sample type

characteristic: strain

text: Microbe sample from Paenibacillus monticola

text: type strain of Paenibacillus monticola

characteristic: type-material


text: Dept. Microbiology and Molecular Medicine, University of Geneva, Faculty of Medicine / CMU

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: Wild type

characteristic: genotype/variation

text: Caulobacter vibrioides NA1000

text: Total-Input_RpoD_Caulobacter_crescentus_NA1000(Expo)_GHA-599


characteristic: External Id

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: monoclonal mouse antibodies targeting RpoD/Sigma70 (Neoclone #WP004)

characteristic: chip antibody

text: Wild type

text: Caulobacter vibrioides NA1000

characteristic: organism

text: ChIP-Seq_RpoD_Caulobacter_crescentus_NA1000(Expo)_GHA-589

characteristic: title


text: live

text: Generic

text: Wild type

text: Caulobacter vibrioides NA1000

text: Total-Input_CdnL_Caulobacter_crescentus_NA1000(Expo)_GHA-604


text: live

text: Generic

text: polyclonal rabbit antibodies targeting CdnL

text: Wild type

text: Caulobacter vibrioides NA1000

text: ChIP-Seq_CdnL_Caulobacter_crescentus_NA1000(Expo)_GHA-600


text: Department of Data Science, Dana-Farber Cancer Institute

text: live

text: Generic

text: 4.5 months

characteristic: age

characteristic: genotype

text: Mus musculus

text: Cortex

text: Cortex

characteristic: tissue


text: live

text: Generic

text: Mus musculus

text: Cortex

text: Cortex


MAG 3

text: NYUAD

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: surface

characteristic: depth

text: This BioSamples is a metagenomic assembly obtained from the microbial community of the host Asterionellopsis glacialis A3 BioSample: SAMN13259158

characteristic: derived-from

text: marine

text: marine

text: marine

characteristic: environmental sample

text: United Arab Emirates: Coast of the Arabian Gulf

characteristic: geo loc name

text: Asterionellopsis glacialis strain A3

characteristic: host

characteristic: isolate

text: non-axenic culture of diatom

characteristic: isolation-source

text: 24.885658 N 54.103783 E

characteristic: lat lon

text: marine metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Paracoccaceae bacterium

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Paracoccaceae bacterium


MAG 5

characteristic: External Id

text: NYUAD

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: surface

text: marine

text: marine

text: marine

text: Asterionellopsis glacialis strain A3

text: non-axenic culture of diatom

text: 24.885658 N 54.103783 E

text: marine metagenome

text: Paracoccaceae bacterium

characteristic: organism

text: metagenomic assembly


MAG 6

text: NYUAD

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: surface

characteristic: depth

characteristic: derived-from

text: marine

text: marine

text: marine

characteristic: environmental sample

text: Asterionellopsis glacialis strain A3

text: non-axenic culture of diatom

text: 24.885658 N 54.103783 E

text: marine metagenome

text: Paracoccaceae bacterium

text: metagenomic assembly

characteristic: title


MAG 11

text: NYUAD

text: live

text: Microbe, viral or environmental

text: surface

text: marine

text: marine

text: marine

characteristic: geo loc name

text: Asterionellopsis glacialis strain A3

characteristic: host

characteristic: isolate

text: non-axenic culture of diatom

characteristic: isolation-source

text: 24.885658 N 54.103783 E

characteristic: lat lon

text: marine metagenome

text: Paracoccaceae bacterium

text: metagenomic assembly