Shelfordella lateralis 48DC3

text: Treated

text: University of Copenhagen

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Shelfordella lateralis gut bacteriome

characteristic: Sample description

text: 33 days

characteristic: age

characteristic: batch

text: Shelfordella lateralis gut

characteristic: broad-scale environmental context

text: Nymph

characteristic: developmental stage

text: Omnivorous Diet

characteristic: diet

characteristic: experiment

text: Denmark

characteristic: geographic location

text: Periplaneta lateralis

characteristic: host

text: Gut

characteristic: host tissue sampled

text: Cockroach Inoculum

text: Shelfordella lateralis nymph

text: Shelfordella lateralis gut

text: insect gut metagenome

characteristic: organism

text: Gut Microbiome

text: Gut

text: Shelfordella lateralis 48DC3

characteristic: title


Shelfordella lateralis 48DC4

status: PUBLIC

text: Treated

tag: attribute

characteristic: Antimicrobial treatment

characteristic: External Id

text: University of Copenhagen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: SRA accession

text: Shelfordella lateralis gut bacteriome

text: 33 days

text: Shelfordella lateralis gut

characteristic: collection date

text: Nymph

text: Omnivorous Diet

text: Denmark

text: Periplaneta lateralis

text: Gut

text: Cockroach Inoculum

characteristic: inoculum

text: Shelfordella lateralis nymph

characteristic: isolate

text: Shelfordella lateralis gut

characteristic: isolation source

text: insect gut metagenome

characteristic: replicate

text: Gut Microbiome

characteristic: sample type

text: Gut

characteristic: tissue

text: Shelfordella lateralis 48DC4


Shelfordella lateralis 48DT1

text: Treated

text: University of Copenhagen

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Shelfordella lateralis gut bacteriome

characteristic: Sample description

text: 33 days

characteristic: age

characteristic: batch

text: Shelfordella lateralis gut

characteristic: broad-scale environmental context

text: Nymph

characteristic: developmental stage

text: Omnivorous Diet

characteristic: diet

characteristic: experiment

text: Denmark

characteristic: geographic location

text: Periplaneta lateralis

characteristic: host

text: Gut

characteristic: host tissue sampled

text: Termite Inoculum

text: Shelfordella lateralis nymph

text: Shelfordella lateralis gut

text: insect gut metagenome

characteristic: organism

text: Gut Microbiome

text: Gut

text: Shelfordella lateralis 48DT1

characteristic: title


Shelfordella lateralis 48DT2

text: Treated

characteristic: Antimicrobial treatment

characteristic: External Id

text: University of Copenhagen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: SRA accession

text: Shelfordella lateralis gut bacteriome

text: 33 days

text: Shelfordella lateralis gut

characteristic: collection date

text: Nymph

text: Omnivorous Diet

text: Denmark

text: Periplaneta lateralis

text: Gut

text: Termite Inoculum

characteristic: inoculum

text: Shelfordella lateralis nymph

characteristic: isolate

text: Shelfordella lateralis gut

characteristic: isolation source

text: insect gut metagenome

text: Gut Microbiome

text: Gut

text: Shelfordella lateralis 48DT2


Shelfordella lateralis 48DT3

text: Treated

text: University of Copenhagen

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Shelfordella lateralis gut bacteriome

characteristic: Sample description

text: 33 days

characteristic: age

characteristic: batch

text: Shelfordella lateralis gut

characteristic: broad-scale environmental context

text: Nymph

characteristic: developmental stage

text: Omnivorous Diet

characteristic: diet

characteristic: experiment

text: Denmark

characteristic: geographic location

text: Periplaneta lateralis

characteristic: host

text: Gut

text: Termite Inoculum

text: Shelfordella lateralis nymph

text: Shelfordella lateralis gut

text: insect gut metagenome

characteristic: replicate

text: Gut Microbiome

characteristic: sample type

text: Gut

characteristic: tissue

text: Shelfordella lateralis 48DT3


Shelfordella lateralis 48DT4

text: Treated

characteristic: Antimicrobial treatment

characteristic: External Id

text: University of Copenhagen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: SRA accession

text: Shelfordella lateralis gut bacteriome

text: 33 days

text: Shelfordella lateralis gut

characteristic: collection date

text: Nymph

text: Omnivorous Diet

text: Denmark

text: Periplaneta lateralis

text: Gut

characteristic: host tissue sampled

text: Termite Inoculum

text: Shelfordella lateralis nymph

text: Shelfordella lateralis gut

text: insect gut metagenome

characteristic: organism

text: Gut Microbiome

text: Gut

text: Shelfordella lateralis 48DT4

characteristic: title


Shelfordella lateralis 48FC1

text: Treated

text: University of Copenhagen

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Shelfordella lateralis gut bacteriome

characteristic: Sample description

text: 33 days

characteristic: age

characteristic: batch

text: Shelfordella lateralis gut

characteristic: broad-scale environmental context

text: Nymph

characteristic: developmental stage

text: Fungus Diet

characteristic: diet

characteristic: experiment

text: Denmark

characteristic: geographic location

text: Periplaneta lateralis

characteristic: host

text: Gut

text: Cockroach Inoculum

characteristic: inoculum

text: Shelfordella lateralis nymph

characteristic: isolate

text: Shelfordella lateralis gut

characteristic: isolation source

text: insect gut metagenome

text: Gut Microbiome

text: Gut

text: Shelfordella lateralis 48FC1


Shelfordella lateralis 48FC2

text: Treated

characteristic: Antimicrobial treatment

characteristic: External Id

text: University of Copenhagen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: SRA accession

text: Shelfordella lateralis gut bacteriome

text: 33 days

text: Shelfordella lateralis gut

characteristic: collection date

text: Nymph

text: Fungus Diet

text: Denmark

text: Periplaneta lateralis

text: Gut

text: Cockroach Inoculum

text: Shelfordella lateralis nymph

text: Shelfordella lateralis gut

text: insect gut metagenome

characteristic: replicate

text: Gut Microbiome

characteristic: sample type

text: Gut

characteristic: tissue

text: Shelfordella lateralis 48FC2


Shelfordella lateralis 48FC3

text: Treated

text: University of Copenhagen

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Shelfordella lateralis gut bacteriome

characteristic: Sample description

text: 33 days

characteristic: age

characteristic: batch

text: Shelfordella lateralis gut

characteristic: broad-scale environmental context

text: Nymph

characteristic: developmental stage

text: Fungus Diet

characteristic: diet

characteristic: experiment

text: Denmark

characteristic: geographic location

text: Periplaneta lateralis

characteristic: host

text: Gut

characteristic: host tissue sampled

text: Cockroach Inoculum

text: Shelfordella lateralis nymph

text: Shelfordella lateralis gut

text: insect gut metagenome

characteristic: organism

text: Gut Microbiome

text: Gut

text: Shelfordella lateralis 48FC3

characteristic: title


Shelfordella lateralis 48FC4

text: Treated

characteristic: Antimicrobial treatment

characteristic: External Id

text: University of Copenhagen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: SRA accession

text: Shelfordella lateralis gut bacteriome

text: 33 days

text: Shelfordella lateralis gut

characteristic: collection date

text: Nymph

text: Fungus Diet

text: Denmark

text: Periplaneta lateralis

text: Gut

text: Cockroach Inoculum

characteristic: inoculum

text: Shelfordella lateralis nymph

characteristic: isolate

text: Shelfordella lateralis gut

characteristic: isolation source

text: insect gut metagenome

text: Gut Microbiome

text: Gut

text: Shelfordella lateralis 48FC4


Shelfordella lateralis 48FT1

text: Treated

text: University of Copenhagen

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Shelfordella lateralis gut bacteriome

characteristic: Sample description

text: 33 days

characteristic: age

characteristic: batch

text: Shelfordella lateralis gut

characteristic: broad-scale environmental context

text: Nymph

characteristic: developmental stage

text: Fungus Diet

characteristic: diet

characteristic: experiment

text: Denmark

characteristic: geographic location

text: Periplaneta lateralis

characteristic: host

text: Gut

text: Termite Inoculum

text: Shelfordella lateralis nymph

text: Shelfordella lateralis gut

text: insect gut metagenome

characteristic: replicate

text: Gut Microbiome

characteristic: sample type

text: Gut

characteristic: tissue

text: Shelfordella lateralis 48FT1


Shelfordella lateralis 48FT2

text: Treated

characteristic: Antimicrobial treatment

characteristic: External Id

text: University of Copenhagen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: SRA accession

text: Shelfordella lateralis gut bacteriome

text: 33 days

text: Shelfordella lateralis gut

characteristic: collection date

text: Nymph

text: Fungus Diet

text: Denmark

text: Periplaneta lateralis

text: Gut

characteristic: host tissue sampled

text: Termite Inoculum

text: Shelfordella lateralis nymph

text: Shelfordella lateralis gut

text: insect gut metagenome

characteristic: organism

text: Gut Microbiome

text: Gut

text: Shelfordella lateralis 48FT2

characteristic: title


Shelfordella lateralis 48FT3

text: Treated

text: University of Copenhagen

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Shelfordella lateralis gut bacteriome

characteristic: Sample description

text: 33 days

characteristic: age

characteristic: batch

text: Shelfordella lateralis gut

characteristic: broad-scale environmental context

text: Nymph

characteristic: developmental stage

text: Fungus Diet

characteristic: diet

characteristic: experiment

text: Denmark

characteristic: geographic location

text: Periplaneta lateralis

characteristic: host

text: Gut

text: Termite Inoculum

characteristic: inoculum

text: Shelfordella lateralis nymph

characteristic: isolate

text: Shelfordella lateralis gut

characteristic: isolation source

text: insect gut metagenome

text: Gut Microbiome

text: Gut

text: Shelfordella lateralis 48FT3


Shelfordella lateralis 49DC1

text: Treated

characteristic: Antimicrobial treatment

characteristic: External Id

text: University of Copenhagen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: SRA accession

text: Shelfordella lateralis gut bacteriome

text: 33 days

text: Shelfordella lateralis gut

characteristic: collection date

text: Nymph

text: Omnivorous Diet

text: Denmark

text: Periplaneta lateralis

text: Gut

text: Cockroach Inoculum

text: Shelfordella lateralis nymph

text: Shelfordella lateralis gut

text: insect gut metagenome

characteristic: replicate

text: Gut Microbiome

characteristic: sample type

text: Gut

characteristic: tissue

text: Shelfordella lateralis 49DC1


Shelfordella lateralis 49DC2

text: Treated

text: University of Copenhagen

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Shelfordella lateralis gut bacteriome

characteristic: Sample description

text: 33 days

characteristic: age

characteristic: batch

text: Shelfordella lateralis gut

characteristic: broad-scale environmental context

text: Nymph

characteristic: developmental stage

text: Omnivorous Diet

characteristic: diet

characteristic: experiment

text: Denmark

characteristic: geographic location

text: Periplaneta lateralis

characteristic: host

text: Gut

characteristic: host tissue sampled

text: Cockroach Inoculum

text: Shelfordella lateralis nymph

text: Shelfordella lateralis gut

text: insect gut metagenome

characteristic: organism

text: Gut Microbiome

text: Gut

text: Shelfordella lateralis 49DC2

characteristic: title


Shelfordella lateralis 49DC3

text: Treated

characteristic: Antimicrobial treatment

characteristic: External Id

text: University of Copenhagen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: SRA accession

text: Shelfordella lateralis gut bacteriome

text: 33 days

text: Shelfordella lateralis gut

characteristic: collection date

text: Nymph

text: Omnivorous Diet

text: Denmark

text: Periplaneta lateralis

text: Gut

text: Cockroach Inoculum

characteristic: inoculum

text: Shelfordella lateralis nymph

characteristic: isolate

text: Shelfordella lateralis gut

characteristic: isolation source

text: insect gut metagenome

text: Gut Microbiome

text: Gut

text: Shelfordella lateralis 49DC3


Shelfordella lateralis 49DT1

text: Treated

text: University of Copenhagen

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Shelfordella lateralis gut bacteriome

characteristic: Sample description

text: 33 days

characteristic: age

characteristic: batch

text: Shelfordella lateralis gut

characteristic: broad-scale environmental context

text: Nymph

characteristic: developmental stage

text: Omnivorous Diet

characteristic: diet

characteristic: experiment

text: Denmark

characteristic: geographic location

text: Periplaneta lateralis

characteristic: host

text: Gut

text: Termite Inoculum

text: Shelfordella lateralis nymph

text: Shelfordella lateralis gut

text: insect gut metagenome

characteristic: replicate

text: Gut Microbiome

characteristic: sample type

text: Gut

characteristic: tissue

text: Shelfordella lateralis 49DT1


Shelfordella lateralis 49DT2

text: Treated

characteristic: Antimicrobial treatment

characteristic: External Id

text: University of Copenhagen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: SRA accession

text: Shelfordella lateralis gut bacteriome

text: 33 days

text: Shelfordella lateralis gut

characteristic: collection date

text: Nymph

text: Omnivorous Diet

text: Denmark

text: Periplaneta lateralis

text: Gut

characteristic: host tissue sampled

text: Termite Inoculum

text: Shelfordella lateralis nymph

text: Shelfordella lateralis gut

text: insect gut metagenome

characteristic: organism

text: Gut Microbiome

text: Gut

text: Shelfordella lateralis 49DT2

characteristic: title


Shelfordella lateralis 49DT3

text: Treated

text: University of Copenhagen

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Shelfordella lateralis gut bacteriome

characteristic: Sample description

text: 33 days

characteristic: age

characteristic: batch

text: Shelfordella lateralis gut

characteristic: broad-scale environmental context

text: Nymph

characteristic: developmental stage

text: Omnivorous Diet

characteristic: diet

characteristic: experiment

text: Denmark

characteristic: geographic location

text: Periplaneta lateralis

characteristic: host

text: Gut

text: Termite Inoculum

characteristic: inoculum

text: Shelfordella lateralis nymph

characteristic: isolate

text: Shelfordella lateralis gut

characteristic: isolation source

text: insect gut metagenome

text: Gut Microbiome

text: Gut

text: Shelfordella lateralis 49DT3


Shelfordella lateralis 49FC1

text: Treated

characteristic: Antimicrobial treatment

characteristic: External Id

text: University of Copenhagen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: SRA accession

text: Shelfordella lateralis gut bacteriome

text: 33 days

text: Shelfordella lateralis gut

characteristic: collection date

text: Nymph

text: Fungus Diet

text: Denmark

text: Periplaneta lateralis

text: Gut

text: Cockroach Inoculum

text: Shelfordella lateralis nymph

text: Shelfordella lateralis gut

text: insect gut metagenome

characteristic: replicate

text: Gut Microbiome

characteristic: sample type

text: Gut

characteristic: tissue

text: Shelfordella lateralis 49FC1


Shelfordella lateralis 49FC2

text: Treated

text: University of Copenhagen

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Shelfordella lateralis gut bacteriome

characteristic: Sample description

text: 33 days

characteristic: age

characteristic: batch

text: Shelfordella lateralis gut

characteristic: broad-scale environmental context

text: Nymph

characteristic: developmental stage

text: Fungus Diet

characteristic: diet

characteristic: experiment

text: Denmark

characteristic: geographic location

text: Periplaneta lateralis

characteristic: host

text: Gut

characteristic: host tissue sampled

text: Cockroach Inoculum

text: Shelfordella lateralis nymph

text: Shelfordella lateralis gut

text: insect gut metagenome

characteristic: organism

text: Gut Microbiome

text: Gut

text: Shelfordella lateralis 49FC2

characteristic: title


Shelfordella lateralis 49FC3

text: Treated

characteristic: Antimicrobial treatment

characteristic: External Id

text: University of Copenhagen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: SRA accession

text: Shelfordella lateralis gut bacteriome

text: 33 days

text: Shelfordella lateralis gut

characteristic: collection date

text: Nymph

text: Fungus Diet

text: Denmark

text: Periplaneta lateralis

text: Gut

text: Cockroach Inoculum

characteristic: inoculum

text: Shelfordella lateralis nymph

characteristic: isolate

text: Shelfordella lateralis gut

characteristic: isolation source

text: insect gut metagenome

text: Gut Microbiome

text: Gut

text: Shelfordella lateralis 49FC3


Shelfordella lateralis 49FT1

text: Treated

text: University of Copenhagen

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Shelfordella lateralis gut bacteriome

characteristic: Sample description

text: 33 days

characteristic: age

characteristic: batch

text: Shelfordella lateralis gut

characteristic: broad-scale environmental context

text: Nymph

characteristic: developmental stage

text: Fungus Diet

characteristic: diet

characteristic: experiment

text: Denmark

characteristic: geographic location

text: Periplaneta lateralis

characteristic: host

text: Gut

text: Termite Inoculum

text: Shelfordella lateralis nymph

text: Shelfordella lateralis gut

text: insect gut metagenome

characteristic: replicate

text: Gut Microbiome

characteristic: sample type

text: Gut

characteristic: tissue

text: Shelfordella lateralis 49FT1


Shelfordella lateralis 49FT2

text: Treated

characteristic: Antimicrobial treatment

characteristic: External Id

text: University of Copenhagen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: SRA accession

text: Shelfordella lateralis gut bacteriome

text: 33 days

text: Shelfordella lateralis gut

characteristic: collection date

text: Nymph

text: Fungus Diet

text: Denmark

text: Periplaneta lateralis

text: Gut

characteristic: host tissue sampled

text: Termite Inoculum

text: Shelfordella lateralis nymph

text: Shelfordella lateralis gut

text: insect gut metagenome

characteristic: organism

text: Gut Microbiome

text: Gut

text: Shelfordella lateralis 49FT2

characteristic: title


Shelfordella lateralis 49FT3

text: Treated

text: University of Copenhagen

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Shelfordella lateralis gut bacteriome

characteristic: Sample description

text: 33 days

characteristic: age

characteristic: batch

text: Shelfordella lateralis gut

characteristic: broad-scale environmental context

text: Nymph

characteristic: developmental stage

text: Fungus Diet

characteristic: diet

characteristic: experiment

text: Denmark

characteristic: geographic location

text: Periplaneta lateralis

characteristic: host

text: Gut

text: Termite Inoculum

characteristic: inoculum

text: Shelfordella lateralis nymph

characteristic: isolate

text: Shelfordella lateralis gut

characteristic: isolation source

text: insect gut metagenome

text: Gut Microbiome

text: Gut

text: Shelfordella lateralis 49FT3


Shelfordella lateralis 61DC1

text: Control

characteristic: Antimicrobial treatment

characteristic: External Id

text: University of Copenhagen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: SRA accession

text: Shelfordella lateralis gut bacteriome

text: 33 days

text: Shelfordella lateralis gut

characteristic: collection date

text: Nymph

text: Omnivorous Diet

text: Denmark

text: Periplaneta lateralis

text: Gut

text: Cockroach Inoculum

text: Shelfordella lateralis nymph

text: Shelfordella lateralis gut

text: insect gut metagenome

characteristic: replicate

text: Gut Microbiome

characteristic: sample type

text: Gut

characteristic: tissue

text: Shelfordella lateralis 61DC1


Shelfordella lateralis 61DC2

text: Control

text: University of Copenhagen

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Shelfordella lateralis gut bacteriome

characteristic: Sample description

text: 33 days

characteristic: age

characteristic: batch

text: Shelfordella lateralis gut

characteristic: broad-scale environmental context

text: Nymph

characteristic: developmental stage

text: Omnivorous Diet

characteristic: diet

characteristic: experiment

text: Denmark

characteristic: geographic location

text: Periplaneta lateralis

characteristic: host

text: Gut

characteristic: host tissue sampled

text: Cockroach Inoculum

text: Shelfordella lateralis nymph

text: Shelfordella lateralis gut

text: insect gut metagenome

characteristic: organism

text: Gut Microbiome

text: Gut

text: Shelfordella lateralis 61DC2

characteristic: title


Shelfordella lateralis 61DC3

text: Control

characteristic: Antimicrobial treatment

characteristic: External Id

text: University of Copenhagen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: SRA accession

text: Shelfordella lateralis gut bacteriome

text: 33 days

text: Shelfordella lateralis gut

characteristic: collection date

text: Nymph

text: Omnivorous Diet

text: Denmark

text: Periplaneta lateralis

text: Gut

text: Cockroach Inoculum

characteristic: inoculum

text: Shelfordella lateralis nymph

characteristic: isolate

text: Shelfordella lateralis gut

characteristic: isolation source

text: insect gut metagenome

text: Gut Microbiome

text: Gut

text: Shelfordella lateralis 61DC3


Shelfordella lateralis 61DT1

text: Control

text: University of Copenhagen

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Shelfordella lateralis gut bacteriome

characteristic: Sample description

text: 33 days

characteristic: age

characteristic: batch

text: Shelfordella lateralis gut

characteristic: broad-scale environmental context

text: Nymph

characteristic: developmental stage

text: Omnivorous Diet

characteristic: diet

characteristic: experiment

text: Denmark

characteristic: geographic location

text: Periplaneta lateralis

characteristic: host

text: Gut

text: Termite Inoculum

text: Shelfordella lateralis nymph

text: Shelfordella lateralis gut

text: insect gut metagenome

characteristic: replicate

text: Gut Microbiome

characteristic: sample type

text: Gut

characteristic: tissue

text: Shelfordella lateralis 61DT1


Shelfordella lateralis 61DT2

text: Control

characteristic: Antimicrobial treatment

characteristic: External Id

text: University of Copenhagen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: SRA accession

text: Shelfordella lateralis gut bacteriome

text: 33 days

text: Shelfordella lateralis gut

characteristic: collection date

text: Nymph

text: Omnivorous Diet

text: Denmark

text: Periplaneta lateralis

text: Gut

characteristic: host tissue sampled

text: Termite Inoculum

text: Shelfordella lateralis nymph

text: Shelfordella lateralis gut

text: insect gut metagenome

characteristic: organism

text: Gut Microbiome

text: Gut

text: Shelfordella lateralis 61DT2

characteristic: title


Shelfordella lateralis 61FC1

text: Control

text: University of Copenhagen

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Shelfordella lateralis gut bacteriome

characteristic: Sample description

text: 33 days

characteristic: age

characteristic: batch

text: Shelfordella lateralis gut

characteristic: broad-scale environmental context

text: Nymph

characteristic: developmental stage

text: Fungus Diet

characteristic: diet

characteristic: experiment

text: Denmark

characteristic: geographic location

text: Periplaneta lateralis

characteristic: host

text: Gut

text: Cockroach Inoculum

characteristic: inoculum

text: Shelfordella lateralis nymph

characteristic: isolate

text: Shelfordella lateralis gut

characteristic: isolation source

text: insect gut metagenome

text: Gut Microbiome

text: Gut

text: Shelfordella lateralis 61FC1


Shelfordella lateralis 61FT1

text: Control

characteristic: Antimicrobial treatment

characteristic: External Id

text: University of Copenhagen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: SRA accession

text: Shelfordella lateralis gut bacteriome

text: 33 days

text: Shelfordella lateralis gut

characteristic: collection date

text: Nymph

text: Fungus Diet

text: Denmark

text: Periplaneta lateralis

text: Gut

text: Termite Inoculum

text: Shelfordella lateralis nymph

text: Shelfordella lateralis gut

text: insect gut metagenome

characteristic: replicate

text: Gut Microbiome

characteristic: sample type

text: Gut

characteristic: tissue

text: Shelfordella lateralis 61FT1


Shelfordella lateralis 61FT2

text: Control

text: University of Copenhagen

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Shelfordella lateralis gut bacteriome

characteristic: Sample description

text: 33 days

characteristic: age

characteristic: batch

text: Shelfordella lateralis gut

characteristic: broad-scale environmental context

text: Nymph

characteristic: developmental stage

text: Fungus Diet

characteristic: diet

characteristic: experiment

text: Denmark

characteristic: geographic location

text: Periplaneta lateralis

characteristic: host

text: Gut

characteristic: host tissue sampled

text: Termite Inoculum

text: Shelfordella lateralis nymph

text: Shelfordella lateralis gut

text: insect gut metagenome

characteristic: organism

text: Gut Microbiome

text: Gut

text: Shelfordella lateralis 61FT2

characteristic: title


Shelfordella lateralis 61FT3

text: Control

characteristic: Antimicrobial treatment

characteristic: External Id

text: University of Copenhagen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: SRA accession

text: Shelfordella lateralis gut bacteriome

text: 33 days

text: Shelfordella lateralis gut

characteristic: collection date

text: Nymph

text: Fungus Diet

text: Denmark

text: Periplaneta lateralis

text: Gut

text: Termite Inoculum

characteristic: inoculum

text: Shelfordella lateralis nymph

characteristic: isolate

text: Shelfordella lateralis gut

characteristic: isolation source

text: insect gut metagenome

text: Gut Microbiome

text: Gut

text: Shelfordella lateralis 61FT3


Shelfordella lateralis OC20

text: Control

text: University of Copenhagen

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Shelfordella lateralis gut bacteriome

characteristic: Sample description

text: 1 day

characteristic: age

characteristic: batch

text: Shelfordella lateralis gut

characteristic: broad-scale environmental context

text: Nymph

characteristic: developmental stage

characteristic: experiment

text: Denmark

characteristic: geographic location

text: Periplaneta lateralis

characteristic: host

text: Gut

text: Shelfordella lateralis nymph

text: Shelfordella lateralis gut

text: insect gut metagenome

characteristic: replicate

text: Gut Microbiome

characteristic: sample type

text: Gut

characteristic: tissue

text: Shelfordella lateralis OC20


Shelfordella lateralis OC23

text: Treated

characteristic: Antimicrobial treatment

characteristic: External Id

text: University of Copenhagen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: SRA accession

text: Shelfordella lateralis gut bacteriome

text: 1 day

text: Shelfordella lateralis gut

text: Nymph

text: Denmark

text: Periplaneta lateralis

text: Gut

characteristic: host tissue sampled

text: Shelfordella lateralis nymph

text: Shelfordella lateralis gut

text: insect gut metagenome

characteristic: organism

text: Gut Microbiome

text: Gut

text: Shelfordella lateralis OC23

characteristic: title


Shelfordella lateralis OC27

text: Control

text: University of Copenhagen

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Shelfordella lateralis gut bacteriome

characteristic: Sample description

text: 1 day

characteristic: age

characteristic: batch

text: Shelfordella lateralis gut

characteristic: broad-scale environmental context

characteristic: collection date

text: Nymph

characteristic: developmental stage

characteristic: experiment

text: Denmark

characteristic: geographic location

text: Periplaneta lateralis

text: Gut

text: Shelfordella lateralis nymph

characteristic: isolate

text: Shelfordella lateralis gut

characteristic: isolation source

text: insect gut metagenome

text: Gut Microbiome

text: Gut

text: Shelfordella lateralis OC27


Shelfordella lateralis OC29

text: Treated

characteristic: Antimicrobial treatment

characteristic: External Id

text: University of Copenhagen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: Shelfordella lateralis gut bacteriome

text: 1 day

text: Shelfordella lateralis gut

text: Nymph

text: Denmark

text: Periplaneta lateralis

characteristic: host

text: Gut

text: Shelfordella lateralis nymph

text: Shelfordella lateralis gut

text: insect gut metagenome

characteristic: replicate

text: Gut Microbiome

characteristic: sample type

text: Gut

characteristic: tissue

text: Shelfordella lateralis OC29


Shelfordella lateralis OC30

text: Treated

text: University of Copenhagen

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Shelfordella lateralis gut bacteriome

characteristic: Sample description

text: 1 day

characteristic: age

characteristic: batch

text: Shelfordella lateralis gut

characteristic: broad-scale environmental context

characteristic: collection date

text: Nymph

text: Denmark

text: Periplaneta lateralis

text: Gut

characteristic: host tissue sampled

text: Shelfordella lateralis nymph

text: Shelfordella lateralis gut

text: insect gut metagenome

characteristic: organism

text: Gut Microbiome

text: Gut

text: Shelfordella lateralis OC30

characteristic: title


Shelfordella lateralis Oc41

text: Control

characteristic: Antimicrobial treatment

characteristic: External Id

text: University of Copenhagen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: Shelfordella lateralis gut bacteriome

text: 1 day

text: Shelfordella lateralis gut

text: Nymph

characteristic: developmental stage

characteristic: experiment

text: Denmark

characteristic: geographic location

text: Periplaneta lateralis

text: Gut

text: Shelfordella lateralis nymph

characteristic: isolate

text: Shelfordella lateralis gut

characteristic: isolation source

text: insect gut metagenome

text: Gut Microbiome

text: Gut

text: Shelfordella lateralis Oc41


Shelfordella lateralis Oc42

text: Control

text: University of Copenhagen

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Shelfordella lateralis gut bacteriome

characteristic: Sample description

text: 1 day

characteristic: age

characteristic: batch

text: Shelfordella lateralis gut

text: Nymph

text: Denmark

text: Periplaneta lateralis

characteristic: host

text: Gut

text: Shelfordella lateralis nymph

text: Shelfordella lateralis gut

text: insect gut metagenome

characteristic: replicate

text: Gut Microbiome

characteristic: sample type

text: Gut

characteristic: tissue

text: Shelfordella lateralis Oc42


Shelfordella lateralis Oc45

text: Treated

characteristic: Antimicrobial treatment

characteristic: External Id

text: University of Copenhagen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: Shelfordella lateralis gut bacteriome

text: 1 day

text: Shelfordella lateralis gut

characteristic: broad-scale environmental context

characteristic: collection date

text: Nymph

text: Denmark

text: Periplaneta lateralis

text: Gut

characteristic: host tissue sampled

text: Shelfordella lateralis nymph

text: Shelfordella lateralis gut

text: insect gut metagenome

characteristic: organism

text: Gut Microbiome

text: Gut

text: Shelfordella lateralis Oc45

characteristic: title


Shelfordella lateralis Oc47

text: Control

text: University of Copenhagen

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Shelfordella lateralis gut bacteriome

characteristic: Sample description

text: 1 day

characteristic: age

text: Shelfordella lateralis gut

text: Nymph

characteristic: developmental stage

characteristic: experiment

text: Denmark

characteristic: geographic location

text: Periplaneta lateralis

text: Gut

text: Shelfordella lateralis nymph

characteristic: isolate

text: Shelfordella lateralis gut

characteristic: isolation source

text: insect gut metagenome

text: Gut Microbiome

text: Gut

text: Shelfordella lateralis Oc47


Shelfordella lateralis Oc48

text: Treated

characteristic: Antimicrobial treatment

characteristic: External Id

text: University of Copenhagen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: Shelfordella lateralis gut bacteriome

text: 1 day

characteristic: batch

text: Shelfordella lateralis gut

text: Nymph

text: Denmark

text: Periplaneta lateralis

characteristic: host

text: Gut

text: Shelfordella lateralis nymph

text: Shelfordella lateralis gut

text: insect gut metagenome

characteristic: replicate

text: Gut Microbiome

characteristic: sample type

text: Gut

characteristic: tissue

text: Shelfordella lateralis Oc48


Shelfordella lateralis Oc49

text: Treated

text: University of Copenhagen

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Shelfordella lateralis gut bacteriome

characteristic: Sample description

text: 1 day

characteristic: age

text: Shelfordella lateralis gut

characteristic: broad-scale environmental context

characteristic: collection date

text: Nymph

text: Denmark

text: Periplaneta lateralis

text: Gut

characteristic: host tissue sampled

text: Shelfordella lateralis nymph

text: Shelfordella lateralis gut

text: insect gut metagenome

characteristic: organism

text: Gut Microbiome

text: Gut

text: Shelfordella lateralis Oc49

characteristic: title


Shelfordella lateralis Oc61

text: Control

characteristic: Antimicrobial treatment

characteristic: External Id

text: University of Copenhagen

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: Shelfordella lateralis gut bacteriome

text: 1 day

text: Shelfordella lateralis gut

text: Nymph

characteristic: developmental stage

characteristic: experiment

text: Denmark

characteristic: geographic location

text: Periplaneta lateralis

text: Gut

text: Shelfordella lateralis nymph

characteristic: isolate

text: Shelfordella lateralis gut

characteristic: isolation source

text: insect gut metagenome

text: Gut Microbiome

text: Gut

text: Shelfordella lateralis Oc61


Shelfordella lateralis mock

text: University of Copenhagen

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Mock community

characteristic: Sample description

characteristic: batch

text: Mock community

text: Denmark

text: Periplaneta lateralis

characteristic: host

text: Mock community

text: Mock community isolation

text: Mock community

text: insect gut metagenome

characteristic: replicate

text: Gut Microbiome

characteristic: sample type

text: Mock community

characteristic: tissue

text: Mock community


characteristic: External Id

text: Biotechonology Unit, Unaerp

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: human THP-1 macrophages and T.rubrum (co-culture)

characteristic: cell type

text: Trichophyton rubrum

characteristic: organism

text: Co-culture, replicate III

characteristic: title


text: Biotechonology Unit, Unaerp

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: Trichophyton rubrum

text: Co-culture, replicate II


text: Biotechonology Unit, Unaerp

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Trichophyton rubrum

text: Co-culture, replicate I


text: Biotechonology Unit, Unaerp

text: live

text: Generic

characteristic: SRA accession

text: human THP-1 macrophages

text: Homo sapiens

text: THP1 - control, replicate III


text: Biotechonology Unit, Unaerp

text: live

text: Generic

text: human THP-1 macrophages

text: Homo sapiens

text: THP1 - control, replicate II


text: Biotechonology Unit, Unaerp

text: live

text: Generic

text: human THP-1 macrophages

text: Homo sapiens

text: THP1 - control, replicate I


text: University of British Columbia

text: live

text: Generic

text: conventional CD4s

characteristic: cells

characteristic: donor

characteristic: independent experiment

text: Homo sapiens

text: Peripheral blood naive conventional CD4s

text: Donor 3 (64), experience 2 (26), CD4s, TS-CAR (HA)

text: TS-CAR (HA)

characteristic: untransduced or car


text: University of British Columbia

text: live

text: Generic

text: conventional CD4s

text: Homo sapiens

text: Donor 3 (64), experience 2 (26), CD4s, non-TS CAR (CD19)

text: non-TS CAR (CD19)


text: University of British Columbia

text: live

text: Generic

text: conventional CD4s

text: Homo sapiens

text: Donor 3 (64), experience 2 (26), CD4s, untransduced

text: untransduced


text: University of British Columbia

text: live

text: Generic

text: Tregs

text: Homo sapiens

text: Peripheral blood naive Treg

text: Donor 3 (64), experience 2 (26), Treg, TS-CAR (HA)

text: TS-CAR (HA)


text: University of British Columbia

text: live

text: Generic

text: Tregs

text: Homo sapiens

text: Peripheral blood naive Treg

text: Donor 3 (64), experience 2 (26), Treg, non-TS CAR (CD19)

text: non-TS CAR (CD19)


text: University of British Columbia

text: live

text: Generic

text: Tregs

text: Homo sapiens

text: Peripheral blood naive Treg

text: Donor 3 (64), experience 2 (26), Treg, untransduced

text: untransduced


text: University of British Columbia

text: live

text: Generic

text: conventional CD4s

text: Homo sapiens

text: Donor 2 (55), experience 1 (24), CD4s, TS-CAR (HA)

text: TS-CAR (HA)


text: University of British Columbia

text: live

text: Generic

text: conventional CD4s

text: Homo sapiens

text: Donor 2 (55), experience 1 (24), CD4s, non-TS CAR (CD19)

text: non-TS CAR (CD19)


text: University of British Columbia

text: live

text: Generic

text: conventional CD4s

text: Homo sapiens

text: Donor 2 (55), experience 1 (24), CD4s, untransduced

text: untransduced


text: University of British Columbia

text: live

text: Generic

text: conventional CD4s

text: Homo sapiens

text: Donor 1 (52), experience 1 (24), CD4s, TS-CAR (HA)

text: TS-CAR (HA)


text: University of British Columbia

text: live

text: Generic

text: conventional CD4s

text: Homo sapiens

text: Donor 1 (52), experience 1 (24), CD4s, non-TS CAR (CD19)

text: non-TS CAR (CD19)


text: University of British Columbia

text: live

text: Generic

text: conventional CD4s

text: Homo sapiens

text: Donor 1 (52), experience 1 (24), CD4s, untransduced

text: untransduced


text: University of British Columbia

text: live

text: Generic

text: Tregs

text: Homo sapiens

text: Peripheral blood naive Treg

text: Donor 2 (55), experience 1 (24), Treg, TS-CAR (HA)

text: TS-CAR (HA)


text: University of British Columbia

text: live

text: Generic

text: Tregs

text: Homo sapiens

text: Peripheral blood naive Treg

text: Donor 1 (52), experience 1 (24), Treg, TS-CAR (HA)

text: TS-CAR (HA)


text: University of British Columbia

text: live

text: Generic

text: Tregs

text: Homo sapiens

text: Peripheral blood naive Treg

text: Donor 1 (52), experience 1 (24), Treg, non-TS CAR (CD19)

text: non-TS CAR (CD19)


text: University of British Columbia

text: live

text: Generic

text: Tregs

text: Homo sapiens

text: Peripheral blood naive Treg

text: Donor 1 (52), experience 1 (24), Treg, untransduced

text: untransduced


text: University of British Columbia

text: live

text: Generic

text: Tregs

text: Homo sapiens

text: Peripheral blood naive Treg

text: Donor 2 (55), experience 1 (24), Treg, non-TS CAR (CD19)

text: non-TS CAR (CD19)


text: University of British Columbia

text: live

text: Generic

text: Tregs

text: Homo sapiens

text: Peripheral blood naive Treg

text: Donor 2 (55), experience 1 (24), Treg, untransduced

text: untransduced


text: Dana-Farber Cancer Institute

text: live

text: Generic

text: Mus musculus

text: MOC1 bearing mice received antiCTLA4 treatment

characteristic: strain

text: Tumor

characteristic: tissue

characteristic: treatment


characteristic: External Id

text: Dana-Farber Cancer Institute

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: Mus musculus

text: MOC1 bearing mice received antiPD1 treatment

text: Tumor


text: Dana-Farber Cancer Institute

characteristic: INSDC last update

text: live

text: Generic

text: Mus musculus

characteristic: organism

text: MOC1 bearing mice received isotype control treatment

text: Tumor

text: isotype control


text: Dana-Farber Cancer Institute

characteristic: INSDC secondary accession

text: live

text: Generic

text: Mus musculus

text: in vitro cultured cell line MOC1

text: Tumor

characteristic: title

text: no treatment


text: Dana-Farber Cancer Institute

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: Mus musculus

text: MOC1E1 bearing mice

text: Tumor

text: no treatment


text: Dana-Farber Cancer Institute

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Mus musculus

text: MOC1 bearing mice

text: Tumor

text: no treatment


text: Dana-Farber Cancer Institute

text: live

text: Generic

text: Mus musculus

text: MOC22 bearing mice received antiPD1 treatment

text: Tumor


text: Dana-Farber Cancer Institute

text: live

text: Generic

text: Mus musculus

text: MOC22 bearing mice received isotype control treatment

text: Tumor

text: isotype control


text: Dana-Farber Cancer Institute

text: live

text: Generic

text: Mus musculus

text: MOC1E1 bearing mice received antiCTLA4 treatment

text: Tumor


text: Dana-Farber Cancer Institute

text: live

text: Generic

text: Mus musculus

text: MOC1E1 bearing mice received antiPD1 treatment

text: Tumor


text: Dana-Farber Cancer Institute

text: live

text: Generic

text: Mus musculus

text: MOC1E1 bearing mice received isotype control treatment

text: Tumor

text: isotype control


text: Dana-Farber Cancer Institute

text: live

text: Generic

text: Mus musculus

text: in vitro cultured cell line MOC1E1

text: Tumor

text: no treatment


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bsub-str168_cam_ms_rep5 was grown in LB broth and was harvested at exponential growth phase on ice supplemented with CAM OD600 0.821

characteristic: culture conditions

characteristic: library protocol

text: Bacillus subtilis

text: in-house Bacterial rRNA Depletion MIX for Cultures , oVP670

characteristic: ribosomal rna delpetion strategy

text: Liquid culture of Bacillus subtilis 168 trpC2.

text: 100microg/ml Chloramphenicol for 5 minutes at 4C


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bsub-str168_stat-d8_rep2 was grown in 2xYT broth at 37C and collected 8 days post inoculation.

text: Bacillus subtilis

text: Stationary growth phase 8 days post-inoculation


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bsub-str168_stat-d8_rep1 was grown in 2xYT broth at 37C and collected 8 days post inoculation.

text: Bacillus subtilis


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bsub-str168_stat-48_rep3 was grown in 2xYT broth at 37C and collected 48 hours post inoculation.

text: Bacillus subtilis

text: Stationary growth phase 48 hours post-inoculation


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bsub-str168_stat-48_rep2 was grown in 2xYT broth at 37C and collected 48 hours post inoculation.

text: Bacillus subtilis


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bsub-str168_stat-48_rep1 was grown in 2xYT broth at 37C and collected 48 hours post inoculation.

text: Bacillus subtilis


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bsub-str168_stat-24_rep3 was grown in 2xYT broth at 37C and collected 24 hours post inoculation.

text: Bacillus subtilis

text: Stationary growth phase 24 hours post-inoculation


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bsub-str168_saltstress_rep3(6) was grown in 2xYT broth at 37C and salt stress was induced at exponential growth OD600 0.39

text: Bacillus subtilis

text: Salt stress, 1M NaCl incubated for 10 minutes


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bsub-str168_saltstress_rep2(5) was grown in 2xYT broth at 37C and salt stress was induced at exponential growth phase OD600 0.31

text: Bacillus subtilis

text: Salt stress, 1M NaCl for 10 minutes


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bsub-str168_saltstress_rep1(4) was grown in 2xYT broth at 37C and salt stress was induced at exponential growth phase OD600 0.2

text: Bacillus subtilis

text: Salt stress, 1M NaCl for 10 minutes


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bsub-str168_ctr_rep6 was grown in 2xYT broth at 37C and harvested at exponential growth phase OD600 0.39.

text: Bacillus subtilis

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bsub-str168_ctr_rep5 was grown in 2xYT broth at 37C and harvested at exponential growth phase OD600 0.31

text: Bacillus subtilis

text: in-house Bacterial rRNA Depletion MIX for Cultures , oVP670

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bsub-str168_stat-24_rep2 was grown in 2xYT broth at 37C and collected 24 hours post inoculation.

text: Bacillus subtilis

text: Liquid culture of Bacillus subtilis 168 trpC2.


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bsub-str168_stat-24_rep1 was grown in 2xYT broth at 37C and collected 24 hours post inoculation.

text: Bacillus subtilis


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: lreu_ctr_rep2 OD600 0.56 and lpla_mup_technical _rep _of _rep2 OD600 0.47

text: Standard 5PSeq, RNA rP5_RND oligo for RNA ligation

text: Lactiplantibacillus plantarum

text: Ribo-Zero rRNA Removal Kit (Bacteria) Illumina

text: Individual Liquid culture of Lactobacillus plantarum (ATCC 8014) and Lactobacillus reuteri (DSM17938.

text: Untreated/65microg/ml Mupirocin incubated for 5 minutes at 37


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: lreu_ctr_rep2 OD600 0.56 and lpla_mup_rep2 OD600 0.47

text: Standard 5PSeq

text: Lactiplantibacillus plantarum


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: lreu_ctr_rep2 OD600 0.56 and lpla_ctr_rep2 OD600 0.47

text: Standard 5PSeq

text: Lactiplantibacillus plantarum

text: Untreated/Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: lreu_ctr_rep2 OD600 0.56 and lpla_cam_rep2 OD600 0.47

text: Standard 5PSeq

text: Lactiplantibacillus plantarum

text: Untreated/ Chloramphenicol incubated for 5 minutes at 37C


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: Standard 5PSeq

text: Lactiplantibacillus plantarum

text: Untreated/100microg/ml Chloramphenicol incubated for 5 minutes at 37C


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: Standard 5PSeq

text: Lactiplantibacillus plantarum

text: Untreated/65microg/ml Mupirocin incubated for 5 minutes at 37C


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: lpla_stat_rep1(4) was grown in MRS broth at 37C for 27 hours OD600 4.3

text: Standard 5PSeq

text: Lactiplantibacillus plantarum

text: Liquid culture of Lactobacillus plantarum (ATCC 8014.

text: Stationary growth phase 27hours post-inoculation


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: pla_starv_rep3(6) was grown in MRS broth at 37C. At exponential growth phase OD600 0.39, was switched to Low nutrient media (0.5X LB broth for 15 minutes)

text: Standard 5PSeq

text: Lactiplantibacillus plantarum

text: Low nutrient: switch from rich media to low nutrient media using 0.5xLB for 15 minutes


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: lpla_starv_rep2(5) was grown in MRS broth at 37C. At exponential growth phase OD600 0.31, was switched to Low nutrient media (0.5X LB broth for 15 minutes.

text: Standard 5PSeq

text: Lactiplantibacillus plantarum


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: to lpla_mup_rep3 was grown in MRS broth at 37C. Mupirocin was added at exponential growthOD600 0.55.

text: Standard 5PSeq

text: Lactiplantibacillus plantarum

text: 65microg/ml Mupirocin for 10 minutes at 37C


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: lpla_mup_rep2 was grown in MRS broth at 37C. Mupirocin was added at exponential growth phase OD600 0.47.

text: Standard 5PSeq

text: Lactiplantibacillus plantarum

text: Ribo-Zero rRNA Removal Kit (Bacteria) Illumina


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: lpla_mup_rep1 was grown in MRS broth at 37C. Mupirocin was added at exponential growth OD600 0.49.

text: Standard 5PSeq

text: Lactiplantibacillus plantarum


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: lpla_hs_rep3(6) was grown in MRS broth at 37C and heat shocked at exponential growth OD600 0.39)

text: Standard 5PSeq

text: Lactiplantibacillus plantarum

text: Heat shock at 60C for 10 minutes


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: compost metagenome

text: in-house Bacterial rRNA Depletion MIX for Cultures oVP676, Yeast_rRNAdepletion_Mix oVP690, human rRNA depletion mix oVP613

text: Compost collected in Sundbyberg, Stockholm


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: compost metagenome

text: in-house Bacterial rRNADepletion MIX for Complex samples oVP676 , Yeast RNAdepletion Mix oVP690, human rRNA depletion mix oVP613


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: Standard 5PSeq, HT-5PSeq

text: Escherichia coli

text: Ribo-Zero rRNA Removal Kit (Bacteria) Illumina. In-house Bacterial rRNA Depletion MIX for Cultures , oVP690

text: Cell sudspension containing mixture of ten inactivated microorganisms (ZymoBIOMICS Microbial Community Standard, cat-no D6300, lot-no ZRC 190633) .


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: spcc-6803_hs_rep1 was cultured in BG11 Media and heat shocked at exponential growth phase OD730 0.47

text: Standard 5PSeq, RNA rP5_RND oligo for RNA ligation

text: Synechocystis sp. PCC 6803

text: Liquid culture of Synechocystis sp. PCC6803.

text: Heat shock for 90 minutes at 42C


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: spcc-6803_ctr_rep1 was cultured in BG11 Media and harvested at exponential growth phase OD730 0.47

text: Synechocystis sp. PCC 6803

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: cvib_stat_rep3 was grown in PYE Media and harvested 7 hours after collection of exponential growth phase sampleOD600 0.8

text: Caulobacter vibrioides

text: Liquid culture of Caulobacter crescentus NA1000.

text: Late exponetial growth


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: cvib_stat_rep1 was grown in PYE Media and harvested 7 hours after collection of exponential growth phase sampleOD600 0.8

text: Caulobacter vibrioides

text: Late eponetial growth


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: cvib_ctr_rep3 was grown in PYE Media and cvib_ctr_rep3 was harvested at exponential growth phase OD600 0.3

text: Caulobacter vibrioides

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: cvib_ctr_rep1 was grown in PYE Media and harvested at exponential growth phase OD600 0.3

text: Caulobacter vibrioides

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bsub-str168_cam_ps_rep6 was grown in LB broth and harvested at exponential growth phase on ice supplemented with CAM OD600 0.628

text: Bacillus subtilis

text: in-house Bacterial rRNA Depletion MIX for Cultures , oVP670

text: Liquid culture of Bacillus subtilis 168 trpC2.

text: 100microg/ml Chloramphenicol for 5 minutes at 4C


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bsub-str168_cam-ms_rep6 was grown in LB broth and harvested at exponential growth phase on ice supplemented with CAM OD600 0.628

text: Bacillus subtilis


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bsub-str168_cam_ps_rep4 was grown in LB broth and harvested at exponential growth phase on ice supplemented with CAM OD600 0.58

text: Bacillus subtilis


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bsub-str168_cam-ms_rep4 was grown in LB broth and harvested at exponential growth phase on ice supplemented with CAM OD600 0.58

text: Bacillus subtilis


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bsub-str168_cam_ps_rep5 was grown in LB broth and harvested at exponential growth phase on ice supplemented with CAM OD600 0.821

text: Bacillus subtilis


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bsub-str168_frag_rep1 was grown in 2xYT broth at 37C and harvested at exponential growth OD600 0.416

text: random fragmented ( Standard 5PSeq), RNA rP5_RND oligo for RNA ligation

text: Bacillus subtilis

text: Ribo-Zero rRNA Removal Kit (Bacteria) Illumina

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bsub-str168_cam_rep3 was grown in 2xYT broth at 37C. Chloramphenicol treatment initiated at exponential growth OD600 0.6

text: Standard 5PSeq, RNA rP5_RND oligo for RNA ligation

text: Bacillus subtilis

text: 100microg/ml Chloramphenicol incubated for 5 minutes at 37C


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bsub-str168_cam_rep2 was grown in 2xYT broth at 37C. Chloramphenicol treatment initiated at exponential growth OD600 0.621

text: Bacillus subtilis


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bsub-str168_cam_rep1 was grown in 2xYT broth at 37C. Chloramphenicol treatment initiated at exponential growth OD600 0.416

text: Standard 5PSeq,RNA rP5_RND oligo for RNA ligation

text: Bacillus subtilis


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bsub-str168_ctr_rep3 was grown in 2xYT broth at 37C and harvested at exponential growth OD600 0.6

text: Bacillus subtilis

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bsub-str168_ctr_rep2 was grown in 2xYT broth at 37C and harvested at exponential growth OD600 0.621

text: Bacillus subtilis

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bsub-str168_ctr_rep1 was grown in 2xYT broth at 37C and harvested at exponential growth OD600 0.416

text: Bacillus subtilis

text: Liquid culture of Bacillus subtilis 168 trpC2.

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: lreu_mup_rep3 was grown in MRS broth at 37C. Mupirocin was added at exponential growth OD600 0.37

text: Standard 5PSeq

text: Limosilactobacillus reuteri

text: Liquid culture of Lactobacillus reuteri (DSM17938.

text: 65microg/ml Mupirocin incubated for 10 minutes at 37C


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: lreu_mup_rep2 was grown in MRS broth at 37C. Mupirocin was added at exponential growth OD600 0.56

text: Standard 5PSeq

text: Limosilactobacillus reuteri


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: lreu_mup_rep1 was grown in MRS broth at 37C. Mupirocin was added at exponential growth OD600 0.34

text: Standard 5PSeq

text: Limosilactobacillus reuteri


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: lreu_frag_rep2 was grown in MRS broth at 37C and harvested at exponential growth OD600 0.56

text: Standard 5PSeq

text: Limosilactobacillus reuteri

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: lleu_frg_rep1 was grown in MRS broth at 37C and harvested at exponential growth phase OD600 0.34

text: Standard 5PSeq

text: Limosilactobacillus reuteri

text: Ribo-Zero rRNA Removal Kit (Bacteria) Illumina

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: lleu_ctr_rep2 was grown in MRS broth at 37C and harvested at exponential growth OD600 0.56

text: Standard 5PSeq

text: Limosilactobacillus reuteri

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: lleu_ctr_rep1 was grown in MRS broth at 37C and harvested at exponential growth OD600 0.34

text: Standard 5PSeq

text: Limosilactobacillus reuteri

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: lleu_cam_rep3 was grown in MRS broth at 37C. Chloramphenicol treatment initiated at exponential growth OD600 0.37.

text: Standard 5PSeq

text: Limosilactobacillus reuteri

text: 100microg/ml Chloramphenicol incubated for 5 minutes at 37C


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: lleu_cam_rep2 was grown in MRS broth at 37C. Chloramphenicol treatment was initiated at exponential growth phase OD600 0.56.

text: Standard 5PSeq

text: Limosilactobacillus reuteri


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: lleu_cam_rep1 was grown in MRS broth at 37C. Chloramphenicol treatment was initiated at exponential growth OD600 0.34.

text: Standard 5PSeq

text: Limosilactobacillus reuteri


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: lpla_starv_rep1(4) was grown in MRS broth at 37C. At exponential growth phase OD600 0.2, was switched to Low nutrient media (0.5X LB broth for 15 minutes.

text: Standard 5PSeq

text: Lactiplantibacillus plantarum

text: Liquid culture of Lactobacillus plantarum (ATCC 8014.

text: Low nutrient: switch from rich media to low nutrient media using 0.5xLB for 15 minutes


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: lpla_stat_rep3(6) was grown in MRS broth at 37C for 27 hours OD600 4.65

text: Standard 5PSeq

text: Lactiplantibacillus plantarum

text: Stationary growth phase 27hours post-inoculation


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: lpla_stat_rep2(5) was grown in MRS broth at 37C for 27 hours OD600 4.5

text: Standard 5PSeq

text: Lactiplantibacillus plantarum


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bamy_frag_rep2 was grown in LB broth at 37C and harvested at exponential growth phase OD600 0.78

text: random fragmented ( 5PSeq)

text: Bacillus amyloliquefaciens

text: Liquid culture of Bacillus amyloliquefaciens.

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bamy_frag_rep1was grown in LB broth at 37C and harvested at exponential growth phase OD600 0.8

text: random fragmented ( 5PSeq)

text: Bacillus amyloliquefaciens

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bamy_ctr_rep3 was grown in LB broth at 37C and harvested at exponential growth phase OD600 0.98

text: Standard 5PSeq

text: Bacillus amyloliquefaciens

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bamy_ctr_rep2 was grown in LB broth at 37C and harvested at exponential growth OD600 0.78

text: Standard 5PSeq

text: Bacillus amyloliquefaciens

text: Ribo-Zero rRNA Removal Kit (Bacteria) Illumina

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bamy_ctr_rep1 was grown in LB broth at 37C and harvested at exponential growth OD600 0.8

text: Standard 5PSeq

text: Bacillus amyloliquefaciens

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bamy_cam_rep3 was grown in LB broth at 37C. Chloramphenicol treatment was initiated at exponential growth phase OD600 0.98

text: Standard 5PSeq

text: Bacillus amyloliquefaciens


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bamy_cam_rep1 was grown in LB broth at 37C. Chloramphenicol treatment was initiated at exponential growth OD600 0.8

text: Standard 5PSeq,

text: Bacillus amyloliquefaciens

text: 100microg/ml Chloramphenicol for 5 minutes at 37C


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: lpla_hs_rep1(4) was grown in MRS broth at 37C. and heat shocked at exponential growth OD600 0.2.

text: Standard 5PSeq

text: Lactiplantibacillus plantarum

text: Heat shock at 60C for 10 minutes


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: lpla_frag_rep2 was grown in MRS broth at 37C and harvested at exponential growth phase OD600 0.47.

text: random fragmented ( 5PSeq)

text: Lactiplantibacillus plantarum

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: lpla_frag_rep1 was grown in MRS broth at 37C and harvested at exponential growth OD600 0.49.

text: random fragmented ( 5PSeq)

text: Lactiplantibacillus plantarum

text: Liquid culture of Lactobacillus plantarum (ATCC 8014.

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: lpla_ctr_rep5 was grown in MRS broth at 37C and harvested at exponential growth phase OD600 0.31.

text: Standard 5PSeq

text: Lactiplantibacillus plantarum

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: lpla_ctr_rep4 was grown in MRS broth at 37C and harvested at exponential growth phase OD600 0.2.

text: Standard 5PSeq

text: Lactiplantibacillus plantarum

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: lpla_ctr_rep3 was grown in MRS broth at 37C and harvested at exponential growth OD600 0.55.

text: Standard 5PSeq

text: Lactiplantibacillus plantarum

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: lpla_ctr_rep2 was grown in MRS broth at 37C and harvested at exponential growth phase OD600 0.47.

text: Standard 5PSeq

text: Lactiplantibacillus plantarum

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: lpla_ctr_rep1 was grown in MRS broth at 37C and harvested at exponential growth OD600 0.49.

text: Standard 5PSeq

text: Lactiplantibacillus plantarum

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: lpla_cam_rep1 was grown in MRS broth at 37C. Chloramphenicol treatment was initiated at exponential growth phase OD600 0.49.

text: Standard 5PSeq

text: Lactiplantibacillus plantarum


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: ecol_frag_rep3 was grown in LB broth at 37C and harvested at exponential growth OD600 0.7.

text: random fragmented ( 5PSeq)

text: Escherichia coli

text: Liquid culture of DH5α (Invitrogen cat-no.18265017.

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: ecol_frag_rep2 was grown in LB broth at 37C and harvested at exponential growth phase OD600 0.89.

text: random fragmented ( 5PSeq)

text: Escherichia coli

text: Ribo-Zero rRNA Removal Kit (Bacteria) Illumina

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: ecol_frag_rep1 was grown in LB broth at 37C and harvested at exponential growth OD600 0.88.

text: random fragmented ( 5PSeq)

text: Escherichia coli

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: ecol_ctr_rep3 was grown in LB broth at 37C and harvested at exponential growth phase OD600 0.7.

text: Standard 5PSeq

text: Escherichia coli

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: ecol_ctr_rep2 was grown in LB broth at 37C and harvested at exponential growth OD600 0.89.

text: Standard 5PSeq

text: Escherichia coli

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: ecol_ctr_rep1 was grown in LB broth at 37C and harvested at exponential growth phase OD600 0.88.

text: Standard 5PSeq

text: Escherichia coli

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: ecol_cam_rep3 was grown in LB broth at 37C. Chloramphenicol treatment was initiated at exponential growth OD600 0.7.

text: Standard 5PSeq

text: Escherichia coli

text: 100microg/ml Chloramphenicol for 5 minutes at 37C


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: ecol_cam_rep2 was grown in LB broth at 37C. Chloramphenicol treatment was initiated at exponential growth phase OD600 0.89.

text: Standard 5PSeq

text: Escherichia coli


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bsub-str168_ctr_rep4 was grown in 2xYT broth at 37C and harvested at exponential growth phase OD600 0.2

text: Bacillus subtilis

text: in-house Bacterial rRNA Depletion MIX for Cultures , oVP670

text: Liquid culture of Bacillus subtilis 168 trpC2.

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bsub-str168_frag_rep3 was grown in 2xYT broth at 37C and harvested at exponential growth OD600 0.6

text: random fragmented ( Standard 5PSeq), RNA rP5_RND oligo for RNA ligation

text: Bacillus subtilis

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bsub-str168_frag_rep2 was grown in 2xYT broth at 37C and harvested at exponential growth phase OD600 0.621

text: Bacillus subtilis

text: Untreated


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: ecol_cam_rep1 was grown in LB broth at 37C. Chloramphenicol treatment was initiated at exponential growth OD600 0.88.

text: Standard 5PSeq

text: Escherichia coli


text: MTC, ScilifeLab - Karolinska Institutet

text: live

text: Generic

text: bamy_frag_rep3 was grown in LB broth at 37C and harvested at exponential growth phase OD600 0.98

text: random fragmented ( 5PSeq)

text: Bacillus amyloliquefaciens

text: Liquid culture of Bacillus amyloliquefaciens.

text: Untreated


text: NB10224, Internal Medicine-Cardiology, UT Southwestern Medical Center

text: live

text: Generic

characteristic: Stage

text: Mus musculus

text: scRNA-seq library

characteristic: strain

text: heart/SAN

text: P4 Shox2-Cre/+; R26 tdTomato/+ mouse SAN scRNA-seq library


text: IDP Molecular Toxicology, University of California, Los Angeles

text: live

text: Generic

text: water

characteristic: experiment design

characteristic: generation

text: Caenorhabditis elegans

text: C. elegans whole worm body

text: whole worm body

characteristic: tissue

text: water

characteristic: treatment group


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: 0.05% ethanol

text: Caenorhabditis elegans

text: C. elegans whole worm body

text: whole worm body

text: ethanol


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: unexposed

text: Caenorhabditis elegans

characteristic: organism

text: C. elegans whole worm body

text: whole worm body

characteristic: title

text: unexposed


PIP 175

text: Mahasarakham University

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Dry

text: Onuma Kaewkla

characteristic: collected by

characteristic: collection date

text: Gram Positive High G+C

characteristic: description

text: Endophyte

text: Field

text: Plant

text: 8 Mbp

characteristic: estimated size

text: Australia: Adelaide, Flinders University

characteristic: geo loc name

text: Half strengh Potato Dextrose agar

text: Non infectious

text: Pittosporum phillyreoides

characteristic: host

text: 5 years

characteristic: host age

text: growth

characteristic: host life stage

text: root

text: Onuma Kaewkla

characteristic: identified by

text: Mannitol mung bean yeast extract mineral salt agar

text: root from native apricot

characteristic: isolation source

text: Flinders University

characteristic: lab

text: 35.02450 S 138.57133 E

characteristic: lat lon

text: dried soil

characteristic: note

text: Streptomyces phytophilus

text: aerobic

text: None pathogenicity

characteristic: pathogenicity

text: publish as novel species

text: aerobe

text: 20% glycerol

characteristic: samp mat process

text: spade

text: 4 week

text: Incubator

text: -20 oC

text: 4 g

text: actinobacteria

characteristic: sample type

characteristic: temp

text: actinobacteria High G+C content

text: chemoorganotroph

text: type strain of Streptomyces phytophilus

characteristic: type-material


characteristic: External Id

text: Foshan University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: cell line

text: MPP7 Knockdown

characteristic: genotype

text: Homo sapiens

characteristic: organism

text: human breast cancer cell line

text: human breast cancer

characteristic: tissue

characteristic: title


text: Foshan University

text: live

text: Generic

text: Control

text: Homo sapiens

text: human breast cancer cell line

text: human breast cancer

text: shCon


text: Lipoprotein Metabolism Section, NIH, NHLBI

text: live

text: Generic

text: Mus musculus

characteristic: strain

text: skin

text: SKIN_EAR, C80

text: EPA-suppl

characteristic: treatment


text: live

text: Generic

text: Mus musculus

text: skin

text: SKIN_EAR, C68

text: Omega-3 Deficient


text: live

text: Generic

text: Mus musculus

text: skin

text: SKIN_EAR, C56

text: DHA-suppl


text: live

text: Generic

text: Mus musculus

text: skin

text: SKIN_EAR, C44

text: EPA-suppl


text: live

text: Generic

text: Mus musculus

text: skin

text: SKIN_EAR, C32

text: DHA-suppl


text: live

text: Generic

text: Mus musculus

text: skin

text: SKIN_EAR, C20

text: EPA-suppl


text: live

text: Generic

text: Mus musculus

text: skin

text: SKIN_EAR, C8

text: Omega-3 Deficient


text: live

text: Generic

text: Mus musculus

text: skin

text: SKIN_EAR, C91

text: DHA-suppl


text: live

text: Generic

text: Mus musculus

text: skin

text: SKIN_EAR, C79

text: EPA-suppl


text: live

text: Generic

text: Mus musculus

text: skin

text: SKIN_EAR, C67

text: Omega-3 Deficient


text: live

text: Generic

text: Mus musculus

text: skin

text: SKIN_EAR, C55

text: DHA-suppl


text: live

text: Generic

text: Mus musculus

text: skin

text: SKIN_EAR, C43

text: EPA-suppl


text: live

text: Generic

text: Mus musculus

text: skin

text: SKIN_EAR, C31

text: Omega-3 Deficient


text: live

text: Generic

text: Mus musculus

text: Aorta_RNA Mouse

text: aorta

text: Aorta_RNA Mouse, C19

text: DHA-suppl


text: live

text: Generic

text: Mus musculus

text: Aorta_RNA Mouse

text: aorta

text: Aorta_RNA Mouse, C7

text: EPA-suppl


text: live

text: Generic

text: Mus musculus

text: Aorta_RNA Mouse

text: aorta

text: Aorta_RNA Mouse, C90

text: Omega-3 Deficient


text: live

text: Generic

text: Mus musculus

text: Aorta_RNA Mouse

text: aorta

text: Aorta_RNA Mouse, C78

text: DHA-suppl


text: live

text: Generic

text: Mus musculus

text: Aorta_RNA Mouse

text: aorta

text: Aorta_RNA Mouse, C66

text: EPA-suppl


text: live

text: Generic

text: Mus musculus

text: Aorta_RNA Mouse

text: aorta

text: Aorta_RNA Mouse, C54

text: DHA-suppl


text: live

text: Generic

text: Mus musculus

text: Aorta_RNA Mouse

text: aorta

text: Aorta_RNA Mouse, C42

text: EPA-suppl


text: live

text: Generic

text: Mus musculus

text: Aorta_RNA Mouse

text: aorta

text: Aorta_RNA Mouse, C30

text: Omega-3 Deficient


text: live

text: Generic

text: Mus musculus

text: Aorta_RNA Mouse

text: aorta

text: Aorta_RNA Mouse, C18

text: DHA-suppl


text: live

text: Generic

text: Mus musculus

text: Aorta_RNA Mouse

text: aorta

text: Aorta_RNA Mouse, C6

text: EPA-suppl


text: live

text: Generic

text: Mus musculus

text: Aorta_RNA Mouse

text: aorta

text: Aorta_RNA Mouse, C89

text: Omega-3 Deficient


text: live

text: Generic

text: Mus musculus

text: Aorta_RNA Mouse

text: aorta

text: Aorta_RNA Mouse, C77

text: DHA-suppl


text: live

text: Generic

text: Mus musculus

text: Aorta_RNA Mouse

text: aorta

text: Aorta_RNA Mouse, C65

text: EPA-suppl


text: live

text: Generic

text: Mus musculus

text: Aorta_RNA Mouse

text: aorta

text: Aorta_RNA Mouse, C53

text: Omega-3 Deficient


text: live

text: Generic

text: Mus musculus

text: Liver_RNA Mouse

text: liver

text: Liver_RNA Mouse, C70

text: DHA-suppl


text: live

text: Generic

text: Mus musculus

text: Liver_RNA Mouse

text: liver

text: Liver_RNA Mouse, C58

text: EPA-suppl


text: live

text: Generic

text: Mus musculus

text: Liver_RNA Mouse

text: liver

text: Liver_RNA Mouse, C46

text: Omega-3 Deficient


text: live

text: Generic

text: Mus musculus

text: Liver_RNA Mouse

text: liver

text: Liver_RNA Mouse, C34

text: DHA-suppl


text: live

text: Generic

text: Mus musculus

text: Liver_RNA Mouse

text: liver

text: Liver_RNA Mouse, C22

text: EPA-suppl


text: live

text: Generic

text: Mus musculus

text: Liver_RNA Mouse

text: liver

text: Liver_RNA Mouse, C10

text: DHA-suppl


text: live

text: Generic

text: Mus musculus

text: Liver_RNA Mouse

text: liver

text: Liver_RNA Mouse, C93

text: EPA-suppl


text: live

text: Generic

text: Mus musculus

text: Liver_RNA Mouse

text: liver

text: Liver_RNA Mouse, C81

text: Omega-3 Deficient


text: live

text: Generic

text: Mus musculus

text: Liver_RNA Mouse

text: liver

text: Liver_RNA Mouse, C69

text: DHA-suppl


text: live

text: Generic

text: Mus musculus

text: Liver_RNA Mouse

text: liver

text: Liver_RNA Mouse, C57

text: EPA-suppl


text: live

text: Generic

text: Mus musculus

text: Liver_RNA Mouse

text: liver

text: Liver_RNA Mouse, C45

text: Omega-3 Deficient


text: live

text: Generic

text: Mus musculus

text: Liver_RNA Mouse

text: liver

text: Liver_RNA Mouse, C33

text: DHA-suppl


text: live

text: Generic

text: Mus musculus

text: Liver_RNA Mouse

text: liver

text: Liver_RNA Mouse, C21

text: EPA-suppl


text: live

text: Generic

text: Mus musculus

text: Liver_RNA Mouse

text: liver

text: Liver_RNA Mouse, C9

text: Omega-3 Deficient


text: live

text: Generic

text: Mus musculus

text: skin

text: SKIN_EAR, C92

text: DHA-suppl


text: Jiangsu University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: China:Yunnan

characteristic: geo loc name

text: Salt mine

characteristic: isolation source

text: Natrinema zhouii

text: pure culture

characteristic: sample type

text: Microbe sample from Natrinema zhouii

text: type strain of Natrinema zhouii

characteristic: type-material


characteristic: External Id

text: Uppsala University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

text: 3 days

characteristic: age

text: adult

text: Amazonian semispecies

characteristic: note

text: Drosophila paulistorum

text: female

characteristic: sex

text: ovary

text: Model organism or animal sample from Drosophila paulistorum


text: Uppsala University

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: 3 days

text: adult

text: Drosophila willistoni

characteristic: organism

text: female

text: ovary

characteristic: tissue

text: Model organism or animal sample from Drosophila willistoni


text: Uppsala University

text: live

text: Model organism or animal

text: 3 days

text: adult

text: Centroamerican semispecies

text: Drosophila paulistorum

text: female

characteristic: strain

text: ovary

characteristic: title


text: Uppsala University

text: live

text: Model organism or animal

text: 3 days

text: adult

text: Drosophila equinoxialis

text: female

text: FS

text: ovary

text: Model organism or animal sample from Drosophila equinoxialis


text: Uppsala University

text: live

text: Model organism or animal

text: 3 days

text: adult

text: Orinocan semispecies

text: Drosophila paulistorum

text: female

text: ovary


text: Uppsala University

text: live

text: Model organism or animal

text: 3 days

text: adult

text: Drosophila insularis

text: female

text: MASS-B-SL

text: ovary

text: Model organism or animal sample from Drosophila insularis


text: Uppsala University

text: live

text: Model organism or animal

text: 3 days

text: adult

text: Interior semispecies

text: Drosophila paulistorum

text: female

text: ovary


text: Uppsala University

text: live

text: Model organism or animal

text: 3 days

text: adult

text: Andean-Brazilian semispecies

text: Drosophila paulistorum

text: female

text: MS

text: ovary


text: Uppsala University

text: live

text: Model organism or animal

text: 3 days

text: adult

text: Orinocan semispecies

text: Drosophila paulistorum

text: female

text: RP

text: ovary


text: Uppsala University

text: live

text: Model organism or animal

text: 3 days

text: adult

text: Transitional semispecies

text: Drosophila paulistorum

text: female

text: SM

text: ovary


text: Uppsala University

text: live

text: Model organism or animal

text: 3 days

text: adult

text: Drosophila tropicalis

text: female

text: SS

text: ovary

text: Model organism or animal sample from Drosophila tropicalis


name: Blattabacterium cuenoti str. SHELFORDElat

text: Okinawa Institute of Science and Technology

text: live

text: Microbe, viral or environmental

text: not collected

characteristic: geo loc name

text: Periplaneta lateralis

characteristic: host

text: fat body

text: Blattabacterium cuenoti

text: tissue sample

characteristic: sample type

text: SHELFORDElat

text: Microbe sample from Blattabacterium cuenoti


characteristic: External Id

text: Murdoch Children's Research Institute

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: neutrophil

characteristic: cell type

characteristic: donor

text: RNA-seq

characteristic: library strategy

text: Homo sapiens

text: Adult Human Peripheral Blood

text: RNA-Seq Donor_23_visit_3

text: 3 months after BCG vaccination

characteristic: treatment protocol


text: Murdoch Children's Research Institute

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: neutrophil

text: RNA-seq

text: Homo sapiens

text: Adult Human Peripheral Blood

text: RNA-Seq Donor_22_visit_3

text: 3 months after BCG vaccination


text: Murdoch Children's Research Institute

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: neutrophil

text: RNA-seq

text: Homo sapiens

characteristic: organism

text: Adult Human Peripheral Blood

text: RNA-Seq Donor_9_visit_3

text: 3 months after BCG vaccination


text: Murdoch Children's Research Institute

text: live

text: Generic

text: neutrophil

text: RNA-seq

text: Homo sapiens

text: Adult Human Peripheral Blood

text: RNA-Seq Donor_23_visit_1

characteristic: title

text: Before vaccination


text: Murdoch Children's Research Institute

text: live

text: Generic

text: neutrophil

text: RNA-seq

text: Homo sapiens

text: Adult Human Peripheral Blood

text: RNA-Seq Donor_22_visit_1

text: Before vaccination


text: Murdoch Children's Research Institute

text: live

text: Generic

text: neutrophil

text: RNA-seq

text: Homo sapiens

text: Adult Human Peripheral Blood

text: RNA-Seq Donor_9_visit_1

text: Before vaccination


text: Murdoch Children's Research Institute

text: live

text: Generic

text: neutrophil

text: Rabbit polyclonal anti-H3K4me3 (Diagenode, cat. # pAb-003-050)

characteristic: chip antibody

text: ChIP-seq

text: Homo sapiens

text: Adult Human Peripheral Blood

text: ChIP-Seq Donor_9_visit_1

text: Before vaccination


text: Murdoch Children's Research Institute

text: live

text: Generic

text: neutrophil

text: ChIP-seq

text: Homo sapiens

text: Adult Human Peripheral Blood

text: ChIP-Seq Donor_23_visit_3

text: 3 months after BCG vaccination


text: Murdoch Children's Research Institute

text: live

text: Generic

text: neutrophil

text: ChIP-seq

text: Homo sapiens

text: Adult Human Peripheral Blood

text: ChIP-Seq Donor_22_visit_3

text: 3 months after BCG vaccination


text: Murdoch Children's Research Institute

text: live

text: Generic

text: neutrophil

text: ChIP-seq

text: Homo sapiens

text: Adult Human Peripheral Blood

text: ChIP-Seq Donor_21_visit_3

text: 3 months after BCG vaccination


text: Murdoch Children's Research Institute

text: live

text: Generic

text: neutrophil

text: ChIP-seq

text: Homo sapiens

text: Adult Human Peripheral Blood

text: ChIP-Seq Donor_15_visit_3

text: 3 months after BCG vaccination


text: Murdoch Children's Research Institute

text: live

text: Generic

text: neutrophil

text: ChIP-seq

text: Homo sapiens

text: Adult Human Peripheral Blood

text: ChIP-Seq Donor_9_visit_3

text: 3 months after BCG vaccination


text: Murdoch Children's Research Institute

text: live

text: Generic

text: neutrophil

text: ChIP-seq

text: Homo sapiens

text: Adult Human Peripheral Blood

text: ChIP-Seq Donor_23_visit_1

text: Before vaccination


text: Murdoch Children's Research Institute

text: live

text: Generic

text: neutrophil

text: ChIP-seq

text: Homo sapiens

text: Adult Human Peripheral Blood

text: ChIP-Seq Donor_22_visit_1

text: Before vaccination


text: Murdoch Children's Research Institute

text: live

text: Generic

text: neutrophil

text: ChIP-seq

text: Homo sapiens

text: Adult Human Peripheral Blood

text: ChIP-Seq Donor_21_visit_1

text: Before vaccination


text: Murdoch Children's Research Institute

text: live

text: Generic

text: neutrophil

text: ChIP-seq

text: Homo sapiens

text: Adult Human Peripheral Blood

text: ChIP-Seq Donor_15_visit_1

text: Before vaccination


characteristic: GC

text: Jill Banfield's Lab at Berkeley

text: live

text: MIMAG.water

characteristic: collection date

characteristic: coverage

text: <100 m

characteristic: depth

text: This BioSample is a metagenomic assembly obtained from the groundwater metagenome BioSample: SAMN15459600

characteristic: derived-from

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: description

text: groundwater planktonic microbiome

characteristic: environmental sample

text: 0.1 um

characteristic: filter size

text: bulk

characteristic: filtration (bulk or serial size)

text: USA: California, Modesto

characteristic: geo loc name

characteristic: isolate

text: groundwater

characteristic: isolation source

text: 37.661915 N 121.114554 W

characteristic: lat lon

text: groundwater metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Gemmatimonadota bacterium

text: B_2_S2_coassembly_Gemmatimonadetes_70_44

characteristic: orgmod-note

text: metagenomic assembly

characteristic: sample-type

text: Ag

characteristic: site


characteristic: External Id

characteristic: GC

text: Jill Banfield's Lab at Berkeley

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIMAG.water

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: <100 m

text: This BioSample is a metagenomic assembly obtained from the groundwater metagenome BioSample: SAMN15459612

text: Keywords: GSC:MIxS;MIMAG:6.0

text: groundwater planktonic microbiome

text: 0.1 um

text: bulk

text: USA: California, Lower Lake

text: groundwater

text: 38.88912 N 122.60507 W

text: groundwater metagenome

text: Acidobacteriota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: title


text: Jill Banfield's Lab at Berkeley

text: live

text: MIMAG.water

characteristic: coverage

text: <100 m

characteristic: depth

characteristic: derived-from

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: description

text: groundwater planktonic microbiome

characteristic: environmental sample

text: 0.1 um

characteristic: filter size

text: bulk

characteristic: filtration (bulk or serial size)

text: USA: California, Lower Lake

characteristic: geo loc name

characteristic: isolate

text: groundwater

characteristic: isolation source

text: 38.88912 N 122.60507 W

characteristic: lat lon

text: groundwater metagenome

text: Pseudomonadota bacterium

text: metagenomic assembly


characteristic: External Id

characteristic: GC

text: Jill Banfield's Lab at Berkeley

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIMAG.water

text: <100 m

text: Keywords: GSC:MIxS;MIMAG:6.0

text: groundwater planktonic microbiome

text: 0.1 um

text: bulk

text: USA: California, Lower Lake

text: groundwater

text: 38.88912 N 122.60507 W

text: groundwater metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Bacteroidota bacterium

characteristic: orgmod-note

text: metagenomic assembly

characteristic: sample-type

characteristic: site


text: Jill Banfield's Lab at Berkeley

text: live

text: MIMAG.water

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

characteristic: coverage

text: <100 m

characteristic: depth

characteristic: derived-from

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: description

text: groundwater planktonic microbiome

characteristic: environmental sample

text: 0.1 um

characteristic: filter size

text: bulk

text: USA: California, Lower Lake

text: groundwater

text: 38.88912 N 122.60507 W

text: groundwater metagenome

text: Chloroflexota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: title


characteristic: External Id

characteristic: GC

text: Jill Banfield's Lab at Berkeley

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIMAG.water

text: <100 m

text: Keywords: GSC:MIxS;MIMAG:6.0

text: groundwater planktonic microbiome

text: 0.1 um

text: bulk

characteristic: filtration (bulk or serial size)

text: USA: California, Lower Lake

characteristic: geo loc name

characteristic: isolate

text: groundwater

characteristic: isolation source

text: 38.88912 N 122.60507 W

characteristic: lat lon

text: groundwater metagenome

text: Gemmatimonadota bacterium

text: metagenomic assembly


text: Jill Banfield's Lab at Berkeley

text: live

text: MIMAG.water

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

characteristic: coverage

text: <100 m

characteristic: depth

characteristic: derived-from

text: Keywords: GSC:MIxS;MIMAG:6.0

text: groundwater planktonic microbiome

text: 0.1 um

text: bulk

text: USA: California, Lower Lake

text: groundwater

text: 38.88912 N 122.60507 W

text: groundwater metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Nitrospirota bacterium

characteristic: orgmod-note

text: metagenomic assembly

characteristic: sample-type

characteristic: site


characteristic: External Id

characteristic: GC

text: Jill Banfield's Lab at Berkeley

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIMAG.water

text: <100 m

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: description

text: groundwater planktonic microbiome

characteristic: environmental sample

text: 0.1 um

characteristic: filter size

text: bulk

text: USA: California, Lower Lake

text: groundwater

text: 38.88912 N 122.60507 W

text: groundwater metagenome

text: Nitrososphaerota archaeon

characteristic: organism

text: metagenomic assembly

characteristic: title


text: Jill Banfield's Lab at Berkeley

text: live

text: MIMAG.water

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

characteristic: coverage

text: <100 m

characteristic: depth

characteristic: derived-from

text: Keywords: GSC:MIxS;MIMAG:6.0

text: groundwater planktonic microbiome

text: 0.1 um

text: bulk

characteristic: filtration (bulk or serial size)

text: USA: California, Lower Lake

characteristic: geo loc name

characteristic: isolate

text: groundwater

characteristic: isolation source

text: 38.88912 N 122.60507 W

characteristic: lat lon

text: groundwater metagenome

text: Verrucomicrobiota bacterium

text: metagenomic assembly


characteristic: External Id

characteristic: GC

text: Jill Banfield's Lab at Berkeley

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIMAG.water

text: <100 m

text: Keywords: GSC:MIxS;MIMAG:6.0

text: groundwater planktonic microbiome

text: 2.5 um

text: serial size

text: USA: California, Lower Lake

text: groundwater

text: 38.88912 N 122.60507 W

text: groundwater metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Chloroflexota bacterium

characteristic: orgmod-note

text: metagenomic assembly

characteristic: sample-type

characteristic: site


text: Jill Banfield's Lab at Berkeley

text: live

text: MIMAG.water

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

characteristic: coverage

text: <100 m

characteristic: depth

characteristic: derived-from

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: description

text: groundwater planktonic microbiome

characteristic: environmental sample

text: 2.5 um

characteristic: filter size

text: serial size

text: USA: California, Lower Lake

text: groundwater

text: 38.88912 N 122.60507 W

text: groundwater metagenome

text: Nitrospirota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: title


characteristic: External Id

characteristic: GC

text: Jill Banfield's Lab at Berkeley

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIMAG.water

text: <100 m

text: Keywords: GSC:MIxS;MIMAG:6.0

text: groundwater planktonic microbiome

text: 0.65 um

text: serial size

characteristic: filtration (bulk or serial size)

text: USA: California, Lower Lake

characteristic: geo loc name

characteristic: isolate

text: groundwater

characteristic: isolation source

text: 38.88912 N 122.60507 W

characteristic: lat lon

text: groundwater metagenome

text: Acidobacteriota bacterium

text: metagenomic assembly