name: Proteobacteria bacterium USOA037 draft genome from a metagenome of a full-scale anaerobic digester

text: National Institute of Advanced Industrial Science and Technology

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 99.02% with 4.59% contamination.

text: true

text: USA: Oakland, California

characteristic: isolate

characteristic: isolation source

text: 37.80 N 122.27 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Proteobacteria bacterium USOA042 draft genome from a metagenome of a full-scale anaerobic digester

status: PUBLIC

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

tag: attribute

characteristic: collection date

text: This BioSample is a metagenomic assembly obtained from the anaerobic digester metagenome BioSample: SAMN14524246

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 98.25% with 0% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Oakland, California

characteristic: geo loc name

text: full-scale anaerobic digester treating sewage operated at 51 degrees C

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Pseudomonadota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Pseudomonadota bacterium

characteristic: title


name: Proteobacteria bacterium USOA043 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 99.19% with 3.35% contamination.

text: true

text: USA: Oakland, California

characteristic: isolate

characteristic: isolation source

text: 37.80 N 122.27 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Proteobacteria bacterium USOA058 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 95.1% with 0.98% contamination.

text: true

text: USA: Oakland, California

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Armatimonadetes bacterium USOA063 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 83.95% with 4.8% contamination.

text: true

text: USA: Oakland, California

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

text: Armatimonadota bacterium

text: metagenomic assembly

text: Microbe sample from Armatimonadota bacterium


name: Proteobacteria bacterium USOA069 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 90.12% with 2.37% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Oakland, California

characteristic: geo loc name

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Proteobacteria bacterium USOA073 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 95.41% with 0.34% contamination.

text: true

text: USA: Oakland, California

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Pseudomonadota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

characteristic: title


name: Bacteroidetes bacterium USOA074 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 93.34% with 4.52% contamination.

text: true

text: USA: Oakland, California

characteristic: isolate

characteristic: isolation source

text: 37.80 N 122.27 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Bacteroidota bacterium

text: metagenomic assembly

text: Microbe sample from Bacteroidota bacterium


name: Firmicutes bacterium USOA076 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 95.97% with 2.24% contamination.

text: true

text: USA: Oakland, California

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Bacteroidetes bacterium USOA083 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 89.99% with 2.66% contamination.

text: true

text: USA: Oakland, California

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

text: Bacteroidota bacterium

text: metagenomic assembly


name: Proteobacteria bacterium USOA090 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 88.23% with 2.05% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Oakland, California

characteristic: geo loc name

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Firmicutes bacterium USOA092 draft genome from a metagenome of a full-scale anaerobic digester

text: National Institute of Advanced Industrial Science and Technology

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 97.32% with 2.24% contamination.

text: true

text: USA: Oakland, California

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Bacillota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Bacillota bacterium

characteristic: title


name: Firmicutes bacterium USOA094 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the anaerobic digester metagenome BioSample: SAMN14524246

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 89.19% with 3.39% contamination.

text: true

text: USA: Oakland, California

characteristic: isolate

characteristic: isolation source

text: 37.80 N 122.27 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Synergistetes bacterium USOA096 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 96.58% with 1.34% contamination.

text: true

text: USA: Oakland, California

text: full-scale anaerobic digester treating sewage operated at 51 degrees C

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

text: Synergistota bacterium

text: metagenomic assembly

text: Microbe sample from Synergistota bacterium


name: Firmicutes bacterium USOA105 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 97.9% with 1.75% contamination.

text: true

text: USA: Oakland, California

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Firmicutes bacterium USOA106 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 93.62% with 0.35% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Oakland, California

characteristic: geo loc name

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Firmicutes bacterium USOA107 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 92.16% with 1.13% contamination.

text: true

text: USA: Oakland, California

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Bacillota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Bacillota bacterium

characteristic: title


name: Firmicutes bacterium USOA109 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 99.33% with 2.68% contamination.

text: true

text: USA: Oakland, California

characteristic: isolate

characteristic: isolation source

text: 37.80 N 122.27 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Bacteroidetes bacterium USOA112 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 98.28% with 1.63% contamination.

text: true

text: USA: Oakland, California

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

text: Bacteroidota bacterium

text: metagenomic assembly


name: Proteobacteria bacterium USOA115 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 99.3% with 0% contamination.

text: true

text: USA: Oakland, California

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly

text: Microbe sample from Pseudomonadota bacterium


name: Firmicutes bacterium USOA119 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 89.27% with 2.45% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Oakland, California

characteristic: geo loc name

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Proteobacteria bacterium USOA122 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 97.18% with 2.58% contamination.

text: true

text: USA: Oakland, California

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Pseudomonadota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

characteristic: title


name: Firmicutes bacterium USOA124 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 91.45% with 0.88% contamination.

text: true

text: USA: Oakland, California

characteristic: isolate

characteristic: isolation source

text: 37.80 N 122.27 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Proteobacteria bacterium USOA126 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

text: National Institute of Advanced Industrial Science and Technology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 97.93% with 1.26% contamination.

text: true

text: USA: Oakland, California

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Firmicutes bacterium USOA132 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: This BioSample is a metagenomic assembly obtained from the anaerobic digester metagenome BioSample: SAMN14524246

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 94.33% with 1.61% contamination.

text: true

text: USA: Oakland, California

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Firmicutes bacterium USOA134 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 94.83% with 4.84% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Oakland, California

characteristic: geo loc name

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Firmicutes bacterium USOA135 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 97.47% with 1.9% contamination.

text: true

text: USA: Oakland, California

text: full-scale anaerobic digester treating sewage operated at 51 degrees C

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Bacillota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Bacillota bacterium

characteristic: title


name: Firmicutes bacterium USOA136 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 97.2% with 1.05% contamination.

text: true

text: USA: Oakland, California

characteristic: isolate

characteristic: isolation source

text: 37.80 N 122.27 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Proteobacteria bacterium USOA141 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 95.03% with 2% contamination.

text: true

text: USA: Oakland, California

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Firmicutes bacterium USOA144 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 94.8% with 1.31% contamination.

text: true

text: USA: Oakland, California

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Proteobacteria bacterium USOA147 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 96.55% with 3.55% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Oakland, California

characteristic: geo loc name

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Firmicutes bacterium USOA150 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 94.23% with 1.92% contamination.

text: true

text: USA: Oakland, California

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Bacillota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Bacillota bacterium

characteristic: title


name: Firmicutes bacterium USOA155 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 95.1% with 1.01% contamination.

text: true

text: USA: Oakland, California

characteristic: isolate

characteristic: isolation source

text: 37.80 N 122.27 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Firmicutes bacterium USOA157 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 98.25% with 0.73% contamination.

text: true

text: USA: Oakland, California

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Firmicutes bacterium USOA162 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 89.22% with 0% contamination.

text: true

text: USA: Oakland, California

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Firmicutes bacterium USOA165 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 89.22% with 0.98% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Oakland, California

characteristic: geo loc name

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Firmicutes bacterium USOA166 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 99.84% with 0.65% contamination.

text: true

text: USA: Oakland, California

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Bacillota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Bacillota bacterium

characteristic: title


name: Firmicutes bacterium USOA176 draft genome from a metagenome of a full-scale anaerobic digester

text: National Institute of Advanced Industrial Science and Technology

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 98.67% with 1.33% contamination.

text: true

text: USA: Oakland, California

characteristic: isolate

characteristic: isolation source

text: 37.80 N 122.27 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Firmicutes bacterium USOA179 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the anaerobic digester metagenome BioSample: SAMN14524246

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 95.95% with 1.19% contamination.

text: true

text: USA: Oakland, California

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Firmicutes bacterium USOA181 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 98.67% with 2.67% contamination.

text: true

text: USA: Oakland, California

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Chloroflexi bacterium USOAx010 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 89.55% with 4.14% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Oakland, California

characteristic: geo loc name

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

text: Chloroflexota bacterium

text: metagenomic assembly

text: Microbe sample from Chloroflexota bacterium


name: Firmicutes bacterium USOAx014 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 92.16% with 0% contamination.

text: true

text: USA: Oakland, California

text: full-scale anaerobic digester treating sewage operated at 51 degrees C

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Bacillota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Bacillota bacterium

characteristic: title


name: Nitrospirae bacterium USOAx026 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 91.23% with 0.05% contamination.

text: true

text: USA: Oakland, California

characteristic: isolate

characteristic: isolation source

text: 37.80 N 122.27 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Nitrospirota bacterium

text: metagenomic assembly

text: Microbe sample from Nitrospirota bacterium


name: Thermotogae bacterium USOAx031 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 94.83% with 0% contamination.

text: true

text: USA: Oakland, California

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

text: Thermotogota bacterium

text: metagenomic assembly

text: Microbe sample from Thermotogota bacterium


name: Firmicutes bacterium USOAx034 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 95.1% with 0.98% contamination.

text: true

text: USA: Oakland, California

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Firmicutes bacterium USOAx044 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 96.17% with 0.89% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Oakland, California

characteristic: geo loc name

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Synergistetes bacterium USOAx047 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 98.31% with 4.39% contamination.

text: true

text: USA: Oakland, California

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Synergistota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Synergistota bacterium

characteristic: title


name: Firmicutes bacterium USOAx048 draft genome from a metagenome of a full-scale anaerobic digester

text: National Institute of Advanced Industrial Science and Technology

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 83.13% with 3.85% contamination.

text: true

text: USA: Oakland, California

characteristic: isolate

characteristic: isolation source

text: 37.80 N 122.27 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Firmicutes bacterium USOAx050 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the anaerobic digester metagenome BioSample: SAMN14524246

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 95.67% with 2.49% contamination.

text: true

text: USA: Oakland, California

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Firmicutes bacterium USOAx064 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 98.55% with 1.33% contamination.

text: true

text: USA: Oakland, California

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Proteobacteria bacterium USOAx090 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 90.07% with 1.17% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Oakland, California

characteristic: geo loc name

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly

text: Microbe sample from Pseudomonadota bacterium


name: Bacteroidetes bacterium USOAx091 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 94.52% with 1.19% contamination.

text: true

text: USA: Oakland, California

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Bacteroidota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Bacteroidota bacterium

characteristic: title


name: Firmicutes bacterium USOAx102 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 83.63% with 4.38% contamination.

text: true

text: USA: Oakland, California

characteristic: isolate

text: full-scale anaerobic digester treating sewage operated at 51 degrees C

characteristic: isolation source

text: 37.80 N 122.27 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Thermotogae bacterium USOAx108 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 100% with 0.35% contamination.

text: true

text: USA: Oakland, California

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

text: Thermotogota bacterium

text: metagenomic assembly


name: Firmicutes bacterium USOAx111 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 92.44% with 0.87% contamination.

text: true

text: USA: Oakland, California

text: 37.80 N 122.27 W

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Bacteroidetes bacterium USPN036 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the anaerobic digester metagenome BioSample: SAMN14524247

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 80.29% with 1.81% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Philadelphia, Pennsylvania

characteristic: geo loc name

text: full-scale anaerobic digester treating sewage operated at 37 degrees C

text: 39.95 N 75.17 W

text: anaerobic digester metagenome

text: true

text: Bacteroidota bacterium

text: metagenomic assembly


name: Proteobacteria bacterium USPN064 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 89.75% with 2.73% contamination.

text: true

text: USA: Philadelphia, Pennsylvania

text: 39.95 N 75.17 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Pseudomonadota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

characteristic: title


name: Bacteroidetes bacterium USPN081 draft genome from a metagenome of a full-scale anaerobic digester

text: National Institute of Advanced Industrial Science and Technology

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 94.33% with 0.11% contamination.

text: true

text: USA: Philadelphia, Pennsylvania

characteristic: isolate

characteristic: isolation source

text: 39.95 N 75.17 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Bacteroidota bacterium

text: metagenomic assembly


name: Candidatus Cloacimonetes bacterium USPN118 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 93.41% with 0% contamination.

text: true

text: USA: Philadelphia, Pennsylvania

text: 39.95 N 75.17 W

text: anaerobic digester metagenome

text: true

text: Candidatus Cloacimonadota bacterium

text: metagenomic assembly

text: Microbe sample from Candidatus Cloacimonadota bacterium


name: Bacteroidetes bacterium USPN120 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 86.94% with 1.46% contamination.

text: true

text: USA: Philadelphia, Pennsylvania

text: 39.95 N 75.17 W

text: anaerobic digester metagenome

text: true

text: Bacteroidota bacterium

text: metagenomic assembly


name: Candidatus Cloacimonetes bacterium USPN136 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 87.46% with 4.95% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Philadelphia, Pennsylvania

characteristic: geo loc name

text: 39.95 N 75.17 W

text: anaerobic digester metagenome

text: true

text: Candidatus Cloacimonadota bacterium

text: metagenomic assembly


name: Spirochaetes bacterium USPN138 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 96.55% with 1.15% contamination.

text: true

text: USA: Philadelphia, Pennsylvania

text: 39.95 N 75.17 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Spirochaetota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Spirochaetota bacterium

characteristic: title


name: Chloroflexi bacterium USPN148 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 92.08% with 2.19% contamination.

text: true

text: USA: Philadelphia, Pennsylvania

characteristic: isolate

characteristic: isolation source

text: 39.95 N 75.17 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Chloroflexota bacterium

text: metagenomic assembly

text: Microbe sample from Chloroflexota bacterium


name: Chloroflexi bacterium USPN153 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 80% with 4.55% contamination.

text: true

text: USA: Philadelphia, Pennsylvania

text: 39.95 N 75.17 W

text: anaerobic digester metagenome

text: true

text: Chloroflexota bacterium

text: metagenomic assembly


name: Firmicutes bacterium USPN159 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 93.59% with 2.56% contamination.

text: true

text: USA: Philadelphia, Pennsylvania

text: 39.95 N 75.17 W

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Synergistetes bacterium USPN171 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 93.22% with 2.54% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Philadelphia, Pennsylvania

characteristic: geo loc name

text: 39.95 N 75.17 W

text: anaerobic digester metagenome

text: true

text: Synergistota bacterium

text: metagenomic assembly

text: Microbe sample from Synergistota bacterium


name: Firmicutes bacterium USPN174 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the anaerobic digester metagenome BioSample: SAMN14524247

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 89.34% with 0.71% contamination.

text: true

text: USA: Philadelphia, Pennsylvania

text: 39.95 N 75.17 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Bacillota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Bacillota bacterium

characteristic: title


name: Thermotogae bacterium USPN176 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 97.37% with 0% contamination.

text: true

text: USA: Philadelphia, Pennsylvania

characteristic: isolate

text: full-scale anaerobic digester treating sewage operated at 37 degrees C

characteristic: isolation source

text: 39.95 N 75.17 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Thermotogota bacterium

text: metagenomic assembly

text: Microbe sample from Thermotogota bacterium


name: Bacteroidetes bacterium USPNx005 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

text: National Institute of Advanced Industrial Science and Technology

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 94.16% with 1.08% contamination.

text: true

text: USA: Philadelphia, Pennsylvania

text: 39.95 N 75.17 W

text: anaerobic digester metagenome

text: true

text: Bacteroidota bacterium

text: metagenomic assembly

text: Microbe sample from Bacteroidota bacterium


name: Thermotogae bacterium USPNx020 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 98.31% with 1.23% contamination.

text: true

text: USA: Philadelphia, Pennsylvania

text: 39.95 N 75.17 W

text: anaerobic digester metagenome

text: true

text: Thermotogota bacterium

text: metagenomic assembly


name: Bacteroidetes bacterium USPNx039 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 97.31% with 4.71% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Philadelphia, Pennsylvania

characteristic: geo loc name

text: 39.95 N 75.17 W

text: anaerobic digester metagenome

text: true

text: Bacteroidota bacterium

text: metagenomic assembly


name: Proteobacteria bacterium USPNx050 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 83.54% with 3.79% contamination.

text: true

text: USA: Philadelphia, Pennsylvania

text: 39.95 N 75.17 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Pseudomonadota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Pseudomonadota bacterium

characteristic: title


name: Firmicutes bacterium USPNx058 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 99.33% with 0% contamination.

text: true

text: USA: Philadelphia, Pennsylvania

characteristic: isolate

characteristic: isolation source

text: 39.95 N 75.17 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Proteobacteria bacterium USPNx068 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 91.01% with 1.68% contamination.

text: true

text: USA: Philadelphia, Pennsylvania

text: 39.95 N 75.17 W

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Thermotogae bacterium USPNx078 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 89.31% with 3.95% contamination.

text: true

text: USA: Philadelphia, Pennsylvania

text: 39.95 N 75.17 W

text: anaerobic digester metagenome

text: true

text: Thermotogota bacterium

text: metagenomic assembly


name: Firmicutes bacterium USPNx099 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 87.61% with 0.7% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Philadelphia, Pennsylvania

characteristic: geo loc name

text: 39.95 N 75.17 W

text: anaerobic digester metagenome

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Bacteroidetes bacterium USPNx100 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 82.35% with 3.67% contamination.

text: true

text: USA: Philadelphia, Pennsylvania

text: 39.95 N 75.17 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Bacteroidota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

characteristic: title


name: Proteobacteria bacterium USPNx102 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the anaerobic digester metagenome BioSample: SAMN14524247

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 87.74% with 2.26% contamination.

text: true

text: USA: Philadelphia, Pennsylvania

characteristic: isolate

characteristic: isolation source

text: 39.95 N 75.17 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Proteobacteria bacterium USPNx115 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 98.06% with 1.94% contamination.

text: true

text: USA: Philadelphia, Pennsylvania

text: 39.95 N 75.17 W

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Proteobacteria bacterium USRA028 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: This BioSample is a metagenomic assembly obtained from the anaerobic digester metagenome BioSample: SAMN14524248

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 95.95% with 4.05% contamination.

text: true

text: USA: Rantoul, Illinois

text: full-scale anaerobic digester treating sewage operated at 30 degrees C

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Proteobacteria bacterium USRA031 draft genome from a metagenome of a full-scale anaerobic digester

text: National Institute of Advanced Industrial Science and Technology

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 93.55% with 1.61% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Rantoul, Illinois

characteristic: geo loc name

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Acidobacteria bacterium USRA051 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 80.98% with 2.85% contamination.

text: true

text: USA: Rantoul, Illinois

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Acidobacteriota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Acidobacteriota bacterium

characteristic: title


name: Spirochaetes bacterium USRA070 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 93.41% with 4.08% contamination.

text: true

text: USA: Rantoul, Illinois

characteristic: isolate

characteristic: isolation source

text: 40.31 N 88.16 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Spirochaetota bacterium

text: metagenomic assembly

text: Microbe sample from Spirochaetota bacterium


name: Proteobacteria bacterium USRA072 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 93.09% with 2.15% contamination.

text: true

text: USA: Rantoul, Illinois

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly

text: Microbe sample from Pseudomonadota bacterium


name: Bacteroidetes bacterium USRA078 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 98.92% with 0.81% contamination.

text: true

text: USA: Rantoul, Illinois

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

text: Bacteroidota bacterium

text: metagenomic assembly

text: Microbe sample from Bacteroidota bacterium


name: Spirochaetes bacterium USRA079 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 81.92% with 4.49% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Rantoul, Illinois

characteristic: geo loc name

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

text: Spirochaetota bacterium

text: metagenomic assembly


name: Bacteroidetes bacterium USRA085 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 80.73% with 2.96% contamination.

text: true

text: USA: Rantoul, Illinois

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Bacteroidota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

characteristic: title


name: Bacteroidetes bacterium USRA089 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 96.24% with 1.08% contamination.

text: true

text: USA: Rantoul, Illinois

characteristic: isolate

characteristic: isolation source

text: 40.31 N 88.16 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Bacteroidota bacterium

text: metagenomic assembly


name: Bacteroidetes bacterium USRA092 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 95.63% with 3.9% contamination.

text: true

text: USA: Rantoul, Illinois

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

text: Bacteroidota bacterium

text: metagenomic assembly


name: Proteobacteria bacterium USRA095 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: This BioSample is a metagenomic assembly obtained from the anaerobic digester metagenome BioSample: SAMN14524248

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 92.26% with 1.29% contamination.

text: true

text: USA: Rantoul, Illinois

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Spirochaetes bacterium USRA098 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 93.1% with 0% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Rantoul, Illinois

characteristic: geo loc name

text: full-scale anaerobic digester treating sewage operated at 30 degrees C

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

text: Spirochaetota bacterium

text: metagenomic assembly


name: Bacteroidetes bacterium USRA099 draft genome from a metagenome of a full-scale anaerobic digester

text: National Institute of Advanced Industrial Science and Technology

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 98.39% with 0.81% contamination.

text: true

text: USA: Rantoul, Illinois

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Bacteroidota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

characteristic: title


name: Bacteroidetes bacterium USRA102 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 97.31% with 1.34% contamination.

text: true

text: USA: Rantoul, Illinois

characteristic: isolate

characteristic: isolation source

text: 40.31 N 88.16 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Bacteroidota bacterium

text: metagenomic assembly


name: Proteobacteria bacterium USRA104 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 94.49% with 1.68% contamination.

text: true

text: USA: Rantoul, Illinois

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Acidobacteria bacterium USRA112 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 89.12% with 2.85% contamination.

text: true

text: USA: Rantoul, Illinois

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

text: Acidobacteriota bacterium

text: metagenomic assembly

text: Microbe sample from Acidobacteriota bacterium


name: Proteobacteria bacterium USRA113 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 97.31% with 1.5% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Rantoul, Illinois

characteristic: geo loc name

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly

text: Microbe sample from Pseudomonadota bacterium


name: Candidatus Elusimicrobia bacterium USRA122 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 97.75% with 2.25% contamination.

text: true

text: USA: Rantoul, Illinois

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Elusimicrobiota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Elusimicrobiota bacterium

characteristic: title


name: Candidatus Elusimicrobia bacterium USRA123 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 90.45% with 1.29% contamination.

text: true

text: USA: Rantoul, Illinois

characteristic: isolate

characteristic: isolation source

text: 40.31 N 88.16 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Elusimicrobiota bacterium

text: metagenomic assembly


name: Acidobacteria bacterium USRA124 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 93.85% with 2.56% contamination.

text: true

text: USA: Rantoul, Illinois

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

text: Acidobacteriota bacterium

text: metagenomic assembly


name: Candidatus Omnitrophica bacterium USRA128 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 93.55% with 0% contamination.

text: true

text: USA: Rantoul, Illinois

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

text: Candidatus Omnitrophota bacterium

text: metagenomic assembly

text: Microbe sample from Candidatus Omnitrophota bacterium


name: Proteobacteria bacterium USRA131 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the anaerobic digester metagenome BioSample: SAMN14524248

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 91.74% with 3.23% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Rantoul, Illinois

characteristic: geo loc name

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Candidatus Cloacimonetes bacterium USRA145 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 90.44% with 1.1% contamination.

text: true

text: USA: Rantoul, Illinois

text: full-scale anaerobic digester treating sewage operated at 30 degrees C

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Candidatus Cloacimonadota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Candidatus Cloacimonadota bacterium

characteristic: title


name: Candidatus Omnitrophica bacterium USRA152 draft genome from a metagenome of a full-scale anaerobic digester

text: National Institute of Advanced Industrial Science and Technology

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 89.43% with 1.61% contamination.

text: true

text: USA: Rantoul, Illinois

characteristic: isolate

characteristic: isolation source

text: 40.31 N 88.16 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Candidatus Omnitrophota bacterium

text: metagenomic assembly


name: Candidatus Omnitrophica bacterium USRA155 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 90.26% with 3.23% contamination.

text: true

text: USA: Rantoul, Illinois

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

text: Candidatus Omnitrophota bacterium

text: metagenomic assembly


name: Candidatus Omnitrophica bacterium USRA162 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 90.8% with 2.15% contamination.

text: true

text: USA: Rantoul, Illinois

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

text: Candidatus Omnitrophota bacterium

text: metagenomic assembly


name: Candidatus Omnitrophica bacterium USRA163 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 92.47% with 0.54% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Rantoul, Illinois

characteristic: geo loc name

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

text: Candidatus Omnitrophota bacterium

text: metagenomic assembly


name: Candidatus Omnitrophica bacterium USRA186 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 92.77% with 2.69% contamination.

text: true

text: USA: Rantoul, Illinois

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Candidatus Omnitrophota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

characteristic: title


name: Firmicutes bacterium USRA191 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 92.55% with 2.79% contamination.

text: true

text: USA: Rantoul, Illinois

characteristic: isolate

characteristic: isolation source

text: 40.31 N 88.16 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Proteobacteria bacterium USRA193 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 85.17% with 1.73% contamination.

text: true

text: USA: Rantoul, Illinois

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly

text: Microbe sample from Pseudomonadota bacterium


name: Proteobacteria bacterium USRA197 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 92.45% with 4.68% contamination.

text: true

text: USA: Rantoul, Illinois

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Candidatus Omnitrophica bacterium USRA198 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 91.94% with 0.54% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Rantoul, Illinois

characteristic: geo loc name

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

text: Candidatus Omnitrophota bacterium

text: metagenomic assembly


name: Candidatus Omnitrophica bacterium USRAx003 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 87.73% with 4.84% contamination.

text: true

text: USA: Rantoul, Illinois

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Candidatus Omnitrophota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Candidatus Omnitrophota bacterium

characteristic: title


name: Proteobacteria bacterium USRAx009 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the anaerobic digester metagenome BioSample: SAMN14524248

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 96.77% with 4.54% contamination.

text: true

text: USA: Rantoul, Illinois

characteristic: isolate

characteristic: isolation source

text: 40.31 N 88.16 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Proteobacteria bacterium USRAx013 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 92.45% with 3.71% contamination.

text: true

text: USA: Rantoul, Illinois

text: full-scale anaerobic digester treating sewage operated at 30 degrees C

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Verrucomicrobia bacterium USRAx022 draft genome from a metagenome of a full-scale anaerobic digester

text: National Institute of Advanced Industrial Science and Technology

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 97.97% with 4.57% contamination.

text: true

text: USA: Rantoul, Illinois

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

text: Verrucomicrobiota bacterium

text: metagenomic assembly

text: Microbe sample from Verrucomicrobiota bacterium


name: Bacteroidetes bacterium USRAx027 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 82.3% with 4.52% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Rantoul, Illinois

characteristic: geo loc name

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

text: Bacteroidota bacterium

text: metagenomic assembly

text: Microbe sample from Bacteroidota bacterium


name: Spirochaetes bacterium USRAx034 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 88.84% with 2.35% contamination.

text: true

text: USA: Rantoul, Illinois

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Spirochaetota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Spirochaetota bacterium

characteristic: title


name: Verrucomicrobia bacterium USRAx054 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 94.93% with 4.05% contamination.

text: true

text: USA: Rantoul, Illinois

characteristic: isolate

characteristic: isolation source

text: 40.31 N 88.16 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Verrucomicrobiota bacterium

text: metagenomic assembly


name: Bacteroidetes bacterium USRAx059 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 84.52% with 4.68% contamination.

text: true

text: USA: Rantoul, Illinois

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

text: Bacteroidota bacterium

text: metagenomic assembly


name: Gemmatimonadetes bacterium USRAx074 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 88.91% with 0.2% contamination.

text: true

text: USA: Rantoul, Illinois

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

text: Gemmatimonadota bacterium

text: metagenomic assembly

text: Microbe sample from Gemmatimonadota bacterium


name: Verrucomicrobia bacterium USRAx086 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 93.41% with 2.73% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Rantoul, Illinois

characteristic: geo loc name

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

text: Verrucomicrobiota bacterium

text: metagenomic assembly


name: Verrucomicrobia bacterium USRAx093 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 95.95% with 4.73% contamination.

text: true

text: USA: Rantoul, Illinois

text: 40.31 N 88.16 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Verrucomicrobiota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

characteristic: title


name: Gemmatimonadetes bacterium USST069 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the anaerobic digester metagenome BioSample: SAMN14524249

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 82.64% with 3.3% contamination.

text: true

text: USA: Stickney, Illinois

characteristic: isolate

text: full-scale anaerobic digester treating sewage operated at 36 degrees C

characteristic: isolation source

text: 41.82 N 87.79 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Gemmatimonadota bacterium

text: metagenomic assembly


name: Bacteroidetes bacterium USST079 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 89.96% with 3.82% contamination.

text: true

text: USA: Stickney, Illinois

text: 41.82 N 87.79 W

text: anaerobic digester metagenome

text: true

text: Bacteroidota bacterium

text: metagenomic assembly


name: Proteobacteria bacterium USST081 draft genome from a metagenome of a full-scale anaerobic digester

text: National Institute of Advanced Industrial Science and Technology

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 84.05% with 3.61% contamination.

text: true

text: USA: Stickney, Illinois

text: 41.82 N 87.79 W

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly

text: Microbe sample from Pseudomonadota bacterium


name: Bacteroidetes bacterium USST092 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 85.82% with 0% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Stickney, Illinois

characteristic: geo loc name

text: 41.82 N 87.79 W

text: anaerobic digester metagenome

text: true

text: Bacteroidota bacterium

text: metagenomic assembly


name: Proteobacteria bacterium USST098 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 95.7% with 3.69% contamination.

text: true

text: USA: Stickney, Illinois

text: 41.82 N 87.79 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Pseudomonadota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

characteristic: title


name: Proteobacteria bacterium USST102 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 99.3% with 3.44% contamination.

text: true

text: USA: Stickney, Illinois

characteristic: isolate

characteristic: isolation source

text: 41.82 N 87.79 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Proteobacteria bacterium USST104 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 90.05% with 2.58% contamination.

text: true

text: USA: Stickney, Illinois

text: 41.82 N 87.79 W

text: anaerobic digester metagenome

text: true

text: Pseudomonadota bacterium

text: metagenomic assembly


name: Bacteroidetes bacterium USST109 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 80.58% with 2.72% contamination.

text: true

text: USA: Stickney, Illinois

text: 41.82 N 87.79 W

text: anaerobic digester metagenome

text: true

text: Bacteroidota bacterium

text: metagenomic assembly

text: Microbe sample from Bacteroidota bacterium


name: Candidatus Omnitrophica bacterium USST122 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 92.41% with 2.03% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Stickney, Illinois

characteristic: geo loc name

text: 41.82 N 87.79 W

text: anaerobic digester metagenome

text: true

text: Candidatus Omnitrophota bacterium

text: metagenomic assembly

text: Microbe sample from Candidatus Omnitrophota bacterium


name: Proteobacteria bacterium USST130 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 97.03% with 1.91% contamination.

text: true

text: USA: Stickney, Illinois

text: 41.82 N 87.79 W

text: anaerobic digester metagenome

text: true

characteristic: metagenomic

text: Pseudomonadota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

characteristic: title


name: Firmicutes bacterium USST146 draft genome from a metagenome of a full-scale anaerobic digester

text: live

text: Microbe, viral or environmental

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 84.8% with 3.36% contamination.

text: true

text: USA: Stickney, Illinois

characteristic: isolate

characteristic: isolation source

text: 41.82 N 87.79 W

characteristic: lat lon

text: anaerobic digester metagenome

characteristic: metagenome source

text: true

text: Bacillota bacterium

text: metagenomic assembly

text: Microbe sample from Bacillota bacterium


name: Spirochaetes bacterium USST165 draft genome from a metagenome of a full-scale anaerobic digester

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: This BioSample is a metagenomic assembly obtained from the anaerobic digester metagenome BioSample: SAMN14524249

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 96.56% with 2.25% contamination.

text: true

text: USA: Stickney, Illinois

text: 41.82 N 87.79 W

text: anaerobic digester metagenome

text: true

text: Spirochaetota bacterium

text: metagenomic assembly

text: Microbe sample from Spirochaetota bacterium


name: Acidobacteria bacterium USST176 draft genome from a metagenome of a full-scale anaerobic digester

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: collection date

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 96.58% with 2.56% contamination.

text: true

text: USA: Stickney, Illinois

text: full-scale anaerobic digester treating sewage operated at 36 degrees C

text: 41.82 N 87.79 W

text: anaerobic digester metagenome

text: true

text: Acidobacteriota bacterium

text: metagenomic assembly

text: Microbe sample from Acidobacteriota bacterium


name: Bacteroidetes bacterium USST178 draft genome from a metagenome of a full-scale anaerobic digester

text: National Institute of Advanced Industrial Science and Technology

text: live

text: Microbe, viral or environmental

characteristic: derived-from

text: Draft genome extracted from metagenomic assembly (paired-end HiSeq2500) through binning, quality check, and manual curation. This draft genome has an estimated completeness of 85.82% with 1.93% contamination.

characteristic: description

text: true

characteristic: environmental sample

text: USA: Stickney, Illinois

characteristic: geo loc name

text: 41.82 N 87.79 W

text: anaerobic digester metagenome

text: true

text: Bacteroidota bacterium

text: metagenomic assembly