characteristic: External Id

text: KAUST

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: 0.1 m

characteristic: depth

text: 10 m

characteristic: elev

text: Bioreactor biofilm

characteristic: env biome

text: Bioreactor

characteristic: env feature

text: Mixed liquor suspended solids

characteristic: environmental sample

text: Saudi Arabia: KAUST

text: marine ANAMMOX bioreactor

text: 22.309774 N 39.102511 E

text: marine metagenome

text: Chloroflexota bacterium

text: metagenomic assembly

text: Anammox reactor biomass


status: PUBLIC

text: KAUST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

tag: attribute

text: 0.1 m

text: 10 m

text: Bioreactor biofilm

text: Bioreactor

text: Mixed liquor suspended solids

text: Saudi Arabia: KAUST

characteristic: geo loc name

characteristic: isolate

text: marine ANAMMOX bioreactor

characteristic: isolation source

text: 22.309774 N 39.102511 E

characteristic: lat lon

text: marine metagenome

characteristic: metagenome source

characteristic: metagenomic

text: This BioSample is a metagenomic assembly obtained from the bioreactor metagenome BioSample: SAMN09700846.

characteristic: note

text: Calditrichota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Anammox reactor biomass

characteristic: title


characteristic: External Id

text: KAUST

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: 0.1 m

characteristic: depth

text: 10 m

characteristic: elev

text: Bioreactor biofilm

characteristic: env biome

text: Bioreactor

characteristic: env feature

text: Mixed liquor suspended solids

characteristic: environmental sample

text: Saudi Arabia: KAUST

text: marine ANAMMOX bioreactor

text: 22.309774 N 39.102511 E

text: marine metagenome

text: Pseudomonadota bacterium

text: metagenomic assembly

text: Anammox reactor biomass


ATM

text: KAUST

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 0.1 m

text: 10 m

text: Bioreactor biofilm

text: Bioreactor

text: Mixed liquor suspended solids

text: Saudi Arabia: KAUST

characteristic: geo loc name

text: ATM

text: marine ANAMMOX bioreactor

text: 22.309774 N 39.102511 E

text: marine metagenome

text: Armatimonadota bacterium

text: metagenomic assembly

text: Anammox reactor biomass


text: KAUST

text: live

text: Microbe, viral or environmental

text: 0.1 m

text: 10 m

text: Bioreactor biofilm

text: Bioreactor

text: Mixed liquor suspended solids

text: Saudi Arabia: KAUST

characteristic: isolate

text: marine ANAMMOX bioreactor

characteristic: isolation source

text: 22.309774 N 39.102511 E

characteristic: lat lon

text: marine metagenome

characteristic: metagenome source

characteristic: metagenomic

characteristic: note

text: Bacteroidota bacterium

characteristic: organism

text: metagenomic assembly

text: Anammox reactor biomass


characteristic: External Id

text: King Abdullah University of Science and Technology

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: Saudi Arabia: Thuwal, RO plant located on Red Sea

text: intake seawater

text: 22.299926 N 39.116758 E

text: biofilter metagenome

text: This BioSample is a metagenomic assembly obtained from the biofilter metagenome BioSample: SAMN09650984.

text: Pseudomonadota bacterium

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Pseudomonadota bacterium

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

characteristic: environmental sample

text: intake seawater

text: 22.299926 N 39.116758 E

text: biofilter metagenome

text: Bacteroidota bacterium

text: metagenomic assembly

text: Microbe sample from Bacteroidota bacterium


characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: biofilm from LA_RO membrane2

text: 22.299926 N 39.116758 E

text: biofilter metagenome

text: This BioSample is a metagenomic assembly obtained from the biofilter metagenome BioSample: SAMN09650985.

text: Thermoproteota archaeon

text: metagenomic assembly

text: Microbe sample from Thermoproteota archaeon


text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: geo loc name

characteristic: isolate

text: biofilm from LA_RO membrane3

text: 22.299926 N 39.116758 E

text: biofilter metagenome

text: Acidobacteriota bacterium

text: metagenomic assembly

text: Microbe sample from Acidobacteriota bacterium


text: live

text: Microbe, viral or environmental

text: biofilm from LA_RO membrane5

characteristic: isolation source

text: 22.299926 N 39.116758 E

characteristic: lat lon

text: biofilter metagenome

characteristic: metagenome source

text: Acidobacteriota bacterium

text: metagenomic assembly


text: live

text: Microbe, viral or environmental

text: biofilm from LA_RO membrane6

text: 22.299926 N 39.116758 E

text: biofilter metagenome

characteristic: metagenomic

characteristic: note

text: Bacteroidota bacterium

characteristic: organism

text: metagenomic assembly


characteristic: External Id

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: biofilm from LB_RO membrane1

text: 22.299926 N 39.116758 E

text: biofilter metagenome

text: This BioSample is a metagenomic assembly obtained from the biofilter metagenome BioSample: SAMN09650986.

text: Thermoproteota archaeon

text: metagenomic assembly

characteristic: sample type


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: biofilm from LB_RO membrane3

text: 22.299926 N 39.116758 E

text: biofilter metagenome

text: Acidobacteriota bacterium

text: metagenomic assembly

characteristic: title


characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: environmental sample

text: biofilm from LB_RO membrane5

text: 22.299926 N 39.116758 E

text: biofilter metagenome

text: Acidobacteriota bacterium

text: metagenomic assembly


text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: geo loc name

text: biofilm from LB_RO membrane6

text: 22.299926 N 39.116758 E

text: biofilter metagenome

text: Bacteroidota bacterium

text: metagenomic assembly


text: live

text: Microbe, viral or environmental

characteristic: isolate

text: biofilm from MA_RO membrane4

characteristic: isolation source

text: 22.299926 N 39.116758 E

characteristic: lat lon

text: biofilter metagenome

text: This BioSample is a metagenomic assembly obtained from the biofilter metagenome BioSample: SAMN09650987.

text: Acidobacteriota bacterium

text: metagenomic assembly


text: live

text: Microbe, viral or environmental

text: biofilm from MA_RO membrane5

text: 22.299926 N 39.116758 E

text: biofilter metagenome

characteristic: metagenome source

characteristic: metagenomic

characteristic: note

text: Bacteroidota bacterium

text: metagenomic assembly


characteristic: External Id

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: biofilm from MA_RO membrane6

text: 22.299926 N 39.116758 E

text: biofilter metagenome

text: Thermoproteota archaeon

characteristic: organism

text: metagenomic assembly


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: biofilm from MB_RO membrane3

text: 22.299926 N 39.116758 E

text: biofilter metagenome

text: This BioSample is a metagenomic assembly obtained from the biofilter metagenome BioSample: SAMN09650988.

text: Acidobacteriota bacterium

text: metagenomic assembly

characteristic: sample type


characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: biofilm from MB_RO membrane5

text: 22.299926 N 39.116758 E

text: biofilter metagenome

text: Bacteroidota bacterium

text: metagenomic assembly

characteristic: title


text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: environmental sample

text: biofilm from MB_RO membrane6

text: 22.299926 N 39.116758 E

text: biofilter metagenome

text: Thermoproteota archaeon

text: metagenomic assembly


text: live

text: Microbe, viral or environmental

characteristic: geo loc name

characteristic: isolate

text: hypersaline brine

characteristic: isolation source

text: 22.299926 N 39.116758 E

text: biofilter metagenome

text: This BioSample is a metagenomic assembly obtained from the biofilter metagenome BioSample: SAMN09650989.

text: Pseudomonadota bacterium

text: metagenomic assembly


text: live

text: Microbe, viral or environmental

text: hypersaline brine

text: 22.299926 N 39.116758 E

characteristic: lat lon

text: biofilter metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Bacteroidota bacterium

text: metagenomic assembly


Transcriptome of Pseudomonas aeruginosa

characteristic: External Id

text: Guangdong Institute of Microbiology

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: Role of nirS in multi-cellular complexes of Pseudomonas aeruginosa ATCC 9027

characteristic: description

text: China: Guangzhou

text: Outer ear infection

text: Pseudomonas paraeruginosa

text: Cell culture

text: ATCC 9027

characteristic: strain

text: Microbe sample from Pseudomonas aeruginosa

text: type strain of Pseudomonas paraeruginosa

characteristic: type-material


text: Peking University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: unclassified sequences; metagenomes; ecological metagenomes; bioreactor sludge metagenome

text: China: Beijing

text: anammox reactor sludge

text: 39.99 N 116.30 E

text: bioreactor metagenome

text: This BioSample is a metagenomic assembly obtained from the bioreactor metagenome BioSample: SAMN09714581

characteristic: note

text: Armatimonadota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Armatimonadetes bacterium ATM1


text: Peking University

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: environmental sample

text: China: Beijing

characteristic: geo loc name

text: anammox reactor sludge

text: 39.99 N 116.30 E

text: bioreactor metagenome

text: Chloroflexota bacterium

text: metagenomic assembly

text: Microbe sample from Chloroflexi bacterium CFX2

characteristic: title


characteristic: External Id

text: Peking University

text: live

text: Microbe, viral or environmental

text: China: Beijing

characteristic: isolate

text: anammox reactor sludge

characteristic: isolation source

text: 39.99 N 116.30 E

characteristic: lat lon

text: bioreactor metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Chloroflexota bacterium

text: metagenomic assembly

text: Microbe sample from Chloroflexi bacterium CFX3


Mitella formosana

text: Henan university

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Plant

text: leaf

characteristic: dev stage

text: China: Taiwan

text: formosana

text: Asimitellaria formosana

text: leaf

characteristic: tissue

text: Plant sample from Mitella


text: Museum national d'Histoire naturelle

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Invertebrate

characteristic: SRA accession

characteristic: breed

characteristic: collection date

text: adult

text: D.A.Evangelista

characteristic: identified by

text: i506, i707

text: adult

text: Pseudoglomeris tarsalis

characteristic: organism

text: MNHN

characteristic: specimen voucher

text: Leg


characteristic: External Id

text: Institute of Hydrobiology, Department of Aquatic Microbial Ecology, Biology Centre, CAS

text: live

characteristic: INSDC status

characteristic: NCBI submission package

text: 10 m

characteristic: depth

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: aquatic

characteristic: env biome

text: freshwater

characteristic: env feature

text: water

characteristic: environmental sample

text: Spain: Amadorio reservoir, Alicante

characteristic: geo loc name

characteristic: isolate

text: freshwater reservoir from 10 m depth

text: 38.5355 N 0.2663 W

text: freshwater metagenome

text: This BioSample is a metagenomic assembly obtained from the Reservoir Amadorio freshwater metagenome BioSample: SAMN02646642 and SAMN02646643

characteristic: note

text: Chloroflexota bacterium

text: metagenomic assembly

characteristic: sample type

text: MIGS Cultured Bacterial/Archaeal sample from Chloroflexota bacterium

characteristic: title


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: NCBI submission model

text: MIGS.ba

characteristic: collection date

text: 150 m

text: Keywords: GSC:MIxS;MIGS:6.0

text: aquatic

text: brackish

text: water

text: Iran: Caspian Sea near Babolsar

text: brackish water from 150 m depth

characteristic: isolation source

text: aquatic metagenome

characteristic: metagenome source

characteristic: metagenomic

text: This BioSample is a metagenomic assembly obtained from the aquatic metagenome BioSample: SAMN03444961

text: Chloroflexota bacterium

text: metagenomic assembly


Chloroflexi bacterium Casp150-chloro-G5

characteristic: External Id

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission package

text: 150 m

characteristic: depth

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: aquatic

text: brackish

text: water

text: Iran: Caspian Sea near Babolsar

text: brackish water from 150 m depth

text: aquatic metagenome

text: Chloroflexota bacterium

characteristic: organism

text: metagenomic assembly


Chloroflexi bacterium Casp150-chloro-G9

text: live

text: MIGS.ba

text: 150 m

text: Keywords: GSC:MIxS;MIGS:6.0

text: aquatic

characteristic: env biome

text: brackish

characteristic: env feature

text: water

characteristic: environmental sample

text: Iran: Caspian Sea near Babolsar

characteristic: geo loc name

characteristic: isolate

text: brackish water from 150 m depth

text: aquatic metagenome

characteristic: note

text: Chloroflexota bacterium

text: metagenomic assembly


Chloroflexi bacterium Casp40-chloro-G10

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: NCBI submission model

text: MIGS.ba

text: 40 m

text: Keywords: GSC:MIxS;MIGS:6.0

text: aquatic

text: brackish

text: water

text: Iran: Caspian Sea near Babolsar

text: brackish water from 40 m depth

text: aquatic metagenome

text: This BioSample is a metagenomic assembly obtained from the aquatic metagenome BioSample: SAMN03444948

text: Chloroflexota bacterium

text: metagenomic assembly

characteristic: sample type

characteristic: title


Chloroflexi bacterium Casp40-chloro-G14

characteristic: External Id

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: collection date

text: 40 m

text: Keywords: GSC:MIxS;MIGS:6.0

text: aquatic

text: brackish

text: water

text: Iran: Caspian Sea near Babolsar

text: brackish water from 40 m depth

characteristic: isolation source

text: aquatic metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Chloroflexota bacterium

text: metagenomic assembly


Chloroflexi bacterium Casp40-chloro-G2

text: live

text: MIGS.ba

characteristic: NCBI submission package

text: 40 m

characteristic: depth

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: aquatic

characteristic: env biome

text: brackish

characteristic: env feature

text: water

text: Iran: Caspian Sea near Babolsar

text: brackish water from 40 m depth

text: aquatic metagenome

text: Chloroflexota bacterium

characteristic: organism

text: metagenomic assembly


Chloroflexi bacterium Casp40-chloro-G4

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIGS.ba

text: 40 m

text: Keywords: GSC:MIxS;MIGS:6.0

text: aquatic

text: brackish

text: water

characteristic: environmental sample

text: Iran: Caspian Sea near Babolsar

characteristic: geo loc name

characteristic: isolate

text: brackish water from 40 m depth

text: aquatic metagenome

characteristic: note

text: Chloroflexota bacterium

text: metagenomic assembly


Chloroflexi bacterium Casp40-chloro-G5

characteristic: External Id

characteristic: INSDC last update

text: live

characteristic: INSDC status

characteristic: NCBI submission model

text: MIGS.ba

text: 40 m

text: Keywords: GSC:MIxS;MIGS:6.0

text: aquatic

text: brackish

text: water

text: Iran: Caspian Sea near Babolsar

text: brackish water from 40 m depth

text: aquatic metagenome

text: Chloroflexota bacterium

text: metagenomic assembly

characteristic: sample type

characteristic: title


Chloroflexi bacterium Casp40-chloro-G9

text: live

text: MIGS.ba

characteristic: NCBI submission package

characteristic: collection date

text: 40 m

characteristic: depth

text: Keywords: GSC:MIxS;MIGS:6.0

text: aquatic

text: brackish

text: water

text: Iran: Caspian Sea near Babolsar

text: brackish water from 40 m depth

characteristic: isolation source

text: aquatic metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Chloroflexota bacterium

text: metagenomic assembly


Chloroflexi bacterium Lanier-chloro-G1

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: aquatic

characteristic: env biome

text: freshwater

characteristic: env feature

text: water

text: USA: Lake Lanier, Georgia

text: freshwater lake

text: freshwater metagenome

text: This BioSample is a metagenomic assembly obtained from the freshwater metagenome BioSample: SAMN02302398 , SAMN02302397 , SAMN02302272 , SAMN02302271 , SAMN02302270

text: Chloroflexota bacterium

characteristic: organism

text: metagenomic assembly


Chloroflexi bacterium LHTX18-chloro-G2

characteristic: External Id

characteristic: INSDC last update

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: aquatic

text: freshwater

text: water

characteristic: environmental sample

text: USA: Lake Houston, TX

characteristic: geo loc name

characteristic: isolate

text: freshwater lake

text: 29.96 N 95.15 W

characteristic: lat lon

text: freshwater metagenome

text: This BioSample is a metagenomic assembly obtained from the freshwater metagenome BioSample: SAMN04510821

characteristic: note

text: Chloroflexota bacterium

text: metagenomic assembly


Chloroflexi bacterium LHTX18-chloro-G3

text: live

characteristic: INSDC status

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

characteristic: collection date

characteristic: depth

text: Keywords: GSC:MIxS;MIGS:6.0

text: aquatic

text: freshwater

text: water

text: USA: Lake Houston, TX

text: freshwater lake

text: 29.96 N 95.15 W

text: freshwater metagenome

text: Chloroflexota bacterium

text: metagenomic assembly

characteristic: sample type

characteristic: title


Chloroflexi bacterium LHTX18-chloro-G4

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: aquatic

characteristic: env biome

text: freshwater

text: water

text: USA: Lake Houston, TX

text: freshwater lake

characteristic: isolation source

text: 29.96 N 95.15 W

text: freshwater metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Chloroflexota bacterium

text: metagenomic assembly


Chloroflexi bacterium RE-chloro-G1

characteristic: External Id

characteristic: INSDC last update

text: live

text: 0.5 m

text: Keywords: GSC:MIxS;MIGS:6.0

text: aquatic

text: freshwater

characteristic: env feature

text: water

characteristic: environmental sample

text: Czech Republic: Rimov reservoir

characteristic: geo loc name

characteristic: isolate

text: freshwater reservoir. 0.5 m delpth

text: 48.846361 N 14.487639 E

text: freshwater metagenome

text: This BioSample is a metagenomic assembly obtained from the freshwater metagenome BioSample: SAMN08331094

text: Chloroflexota bacterium

characteristic: organism

text: metagenomic assembly


Chloroflexi bacterium RE-chloro-G2

text: live

characteristic: INSDC status

characteristic: NCBI submission package

characteristic: collection date

text: 0.5 m

characteristic: depth

text: Keywords: GSC:MIxS;MIGS:6.0

text: aquatic

text: freshwater

text: water

text: Czech Republic: Rimov reservoir

text: freshwater reservoir. 0.5 m delpth

text: 48.846361 N 14.487639 E

characteristic: lat lon

text: freshwater metagenome

characteristic: note

text: Chloroflexota bacterium

text: metagenomic assembly


Chloroflexi bacterium RE-chloro-G3

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: 0.5 m

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: aquatic

characteristic: env biome

text: freshwater

text: water

text: Czech Republic: Rimov reservoir

text: freshwater reservoir. 0.5 m delpth

text: 48.846361 N 14.487639 E

text: freshwater metagenome

text: Chloroflexota bacterium

text: metagenomic assembly

characteristic: sample type

characteristic: title


Chloroflexi bacterium RH-chloro-G1

characteristic: External Id

characteristic: INSDC last update

text: live

text: 30 m

text: Keywords: GSC:MIxS;MIGS:6.0

text: aquatic

text: freshwater

characteristic: env feature

text: water

text: Czech Republic: Rimov reservoir

text: freshwater reservoir, 30 m depth

characteristic: isolation source

text: 48.846361 N 14.487639 E

text: freshwater metagenome

characteristic: metagenome source

characteristic: metagenomic

text: This BioSample is a metagenomic assembly obtained from the freshwater metagenome BioSample: SAMN08331095

text: Chloroflexota bacterium

text: metagenomic assembly


Chloroflexi bacterium RH-chloro-G2

text: live

characteristic: INSDC status

characteristic: NCBI submission package

text: 30 m

text: Keywords: GSC:MIxS;MIGS:6.0

text: aquatic

text: freshwater

text: water

characteristic: environmental sample

text: Czech Republic: Rimov reservoir

characteristic: geo loc name

characteristic: isolate

text: freshwater reservoir, 30 m depth

text: 48.846361 N 14.487639 E

text: freshwater metagenome

text: Chloroflexota bacterium

characteristic: organism

text: metagenomic assembly


Chloroflexi bacterium RH-chloro-G3

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: collection date

text: 30 m

characteristic: depth

text: Keywords: GSC:MIxS;MIGS:6.0

text: aquatic

text: freshwater

text: water

text: Czech Republic: Rimov reservoir

text: freshwater reservoir, 30 m depth

text: 48.846361 N 14.487639 E

characteristic: lat lon

text: freshwater metagenome

characteristic: note

text: Chloroflexota bacterium

text: metagenomic assembly


Chloroflexi bacterium RH-chloro-G4

characteristic: External Id

characteristic: INSDC last update

text: live

text: 30 m

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: aquatic

characteristic: env biome

text: freshwater

text: water

text: Czech Republic: Rimov reservoir

text: freshwater reservoir, 30 m depth

text: 48.846361 N 14.487639 E

text: freshwater metagenome

text: Chloroflexota bacterium

text: metagenomic assembly

characteristic: sample type

characteristic: title


Chloroflexi bacterium Soli-chloro-G3

text: live

characteristic: INSDC status

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

text: Keywords: GSC:MIxS;MIGS:6.0

text: aquatic

text: freshwater

characteristic: env feature

text: water

text: Brazil: Solimoes River

text: freshwater river

characteristic: isolation source

text: 3.86 S 23.04 W

text: freshwater metagenome

characteristic: metagenome source

characteristic: metagenomic

text: This BioSample is a metagenomic assembly obtained from the freshwater metagenome BioSample: SAMN02905733

text: Chloroflexota bacterium

text: metagenomic assembly


Chloroflexi bacterium Soli-chloro-G4

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIGS.ba

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:6.0

text: aquatic

text: freshwater

text: water

characteristic: environmental sample

text: Brazil: Solimoes River

characteristic: geo loc name

characteristic: isolate

text: freshwater river

text: 3.86 S 23.04 W

text: freshwater metagenome

text: Chloroflexota bacterium

characteristic: organism

text: metagenomic assembly


Chloroflexi bacterium Tous12m-chloro-G3

characteristic: External Id

characteristic: INSDC last update

text: live

text: 12 m

characteristic: depth

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: aquatic

characteristic: env biome

text: freshwater

text: water

text: Spain: Tous reservoir, Valencia

text: freshwater reservoir

text: 39.14 N 0.6499 W

characteristic: lat lon

text: freshwater metagenome

text: This BioSample is a metagenomic assembly obtained from the freshwater metagenome BioSample: SAMN05736575

characteristic: note

text: Chloroflexota bacterium

text: metagenomic assembly


Chloroflexi bacterium Tous25m-chloro-G3

text: live

characteristic: INSDC status

characteristic: NCBI submission package

text: 25 m

text: Keywords: GSC:MIxS;MIGS:6.0

text: aquatic

text: freshwater

characteristic: env feature

text: water

text: Spain: Tous reservoir, Valencia

text: freshwater reservoir from 25 m depth

characteristic: isolation source

text: 39.14 N 0.6499 W

text: freshwater metagenome

text: This BioSample is a metagenomic assembly obtained from the freshwater metagenome BioSample: SAMN05736576

text: Chloroflexota bacterium

text: metagenomic assembly

characteristic: sample type

characteristic: title


Chloroflexi bacterium ZH-chloro-G1

characteristic: INSDC center name

characteristic: INSDC first public

text: live

characteristic: collection date

text: 40-80 m

text: Keywords: GSC:MIxS;MIGS:6.0

text: aquatic

text: freshwater

text: water

characteristic: environmental sample

text: Switzerland: Lake Zurich

text: freshwater lake, 40-80 m depth

text: 47.30 N 8.57 E

text: freshwater metagenome

characteristic: metagenome source

characteristic: metagenomic

text: This BioSample is a metagenomic assembly obtained from the freshwater metagenome BioSample: SAMN08297413

text: Chloroflexota bacterium

text: metagenomic assembly


Chloroflexi bacterium ZH-chloro-G2

characteristic: External Id

characteristic: INSDC last update

text: live

text: 40-80 m

characteristic: depth

text: Keywords: GSC:MIxS;MIGS:6.0

text: aquatic

text: freshwater

text: water

text: Switzerland: Lake Zurich

characteristic: geo loc name

characteristic: isolate

text: freshwater lake, 40-80 m depth

text: 47.30 N 8.57 E

text: freshwater metagenome

text: Chloroflexota bacterium

characteristic: organism

text: metagenomic assembly


Chloroflexi bacterium ZH-chloro-G3

text: live

characteristic: INSDC status

characteristic: NCBI submission package

text: 40-80 m

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: aquatic

characteristic: env biome

text: freshwater

text: water

text: Switzerland: Lake Zurich

text: freshwater lake, 40-80 m depth

text: 47.30 N 8.57 E

characteristic: lat lon

text: freshwater metagenome

characteristic: note

text: Chloroflexota bacterium

text: metagenomic assembly


Chloroflexi bacterium ZH-chloro-G4

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: 40-80 m

text: Keywords: GSC:MIxS;MIGS:6.0

text: aquatic

text: freshwater

characteristic: env feature

text: water

text: Switzerland: Lake Zurich

text: freshwater lake, 40-80 m depth

characteristic: isolation source

text: 47.30 N 8.57 E

text: freshwater metagenome

text: Chloroflexota bacterium

text: metagenomic assembly

characteristic: sample type

characteristic: title


characteristic: External Id

characteristic: INSDC last update

text: live

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:6.0

text: aquatic

text: freshwater

text: water

characteristic: environmental sample

text: Switzerland: Lake Zurich

text: freshwater lake, 2 m depth

text: 47.30 N 8.57 E

text: freshwater metagenome

characteristic: metagenome source

characteristic: metagenomic

text: This BioSample is a metagenomic assembly obtained from the freshwater metagenome BioSample: SAMN08297370

text: Chloroflexota bacterium

text: metagenomic assembly


text: live

characteristic: INSDC status

characteristic: NCBI submission package

characteristic: depth

text: Keywords: GSC:MIxS;MIGS:6.0

text: aquatic

text: freshwater

text: water

text: Switzerland: Lake Zurich

characteristic: geo loc name

characteristic: isolate

text: freshwater lake, 80 m depth

text: 47.30 N 8.57 E

text: freshwater metagenome

text: This BioSample is a metagenomic assembly obtained from the freshwater metagenome BioSample: SAMN08297396

text: Chloroflexota bacterium

characteristic: organism

text: metagenomic assembly


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: aquatic

characteristic: env biome

text: freshwater

text: water

text: Switzerland: Lake Zurich

text: freshwater lake, 5 m depth

text: 47.30 N 8.57 E

characteristic: lat lon

text: freshwater metagenome

text: This BioSample is a metagenomic assembly obtained from the freshwater metagenome BioSample: SAMN08297367

characteristic: note

text: Chloroflexota bacterium

text: metagenomic assembly


characteristic: External Id

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: SRA accession

text: Kerstin Kaerger

characteristic: collected by

text: Germany: Jena

text: Homo sapiens

characteristic: host

text: sepsis

characteristic: host disease

text: blood

characteristic: isolation source

text: 50.92 N 11.58 E

text: Nakaseomyces glabratus

characteristic: title


text: The Chinese University of Hong Kong

text: live

characteristic: INSDC status

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

text: CUHK

characteristic: collection date

text: Hong Kong

characteristic: geo loc name

text: Homo sapiens

text: HNSCC

text: Oral tumor tissue

text: Fusobacterium vincentii

characteristic: strain

text: Pathogen: clinical or host-associated sample from Fusobacterium vincentii


text: BGI

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: China: Shenzhen

text: Homo sapiens

text: feces

text: Thomasclavelia ramosa

characteristic: organism

text: whole organism

characteristic: sample type

text: Microbe sample from Thomasclavelia ramosa


characteristic: External Id

text: BGI

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: China: Shenzhen

text: Homo sapiens

text: feces

text: [Clostridium] nexile

text: whole organism

text: Microbe sample from [Clostridium] nexile


text: BGI

text: live

text: Microbe, viral or environmental

text: China: Shenzhen

text: Homo sapiens

text: feces

text: Thomasclavelia spiroformis

text: whole organism

text: Microbe sample from Thomasclavelia spiroformis


text: Zoological Research Museum Alexander Koenig

characteristic: INSDC secondary accession

text: live

text: Invertebrate

characteristic: SRA accession

text: Ecuador: Zamora-Chinchipe, c. 3 km W Guayguayme Alto, ridge above San Luis

characteristic: isolate

text: Caeruleuptychia francisca

characteristic: specimen voucher

text: legs

characteristic: tissue

text: Invertebrate sample from Caeruleuptychia francisca


Isoetes engelmannii

text: Iridian Genomes

text: live

characteristic: INSDC status

text: Plant

text: adult

characteristic: dev stage

text: USA

text: IRGN DK1S5LJ70Y

text: Isoetes engelmannii

text: plant tissue

text: Plant sample from Isoetes engelmannii

characteristic: title


text: Department of Biochemistry and Molecular Genetics, University of Alabama at Birmingham

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Mus musculus

text: GEO accession GSM3319944 is currently private and is scheduled to be released on Dec 31, 2024.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM3319943 is currently private and is scheduled to be released on Dec 31, 2024.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM3319942 is currently private and is scheduled to be released on Dec 31, 2024.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM3319941 is currently private and is scheduled to be released on Dec 31, 2024.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM3319940 is currently private and is scheduled to be released on Dec 31, 2024.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM3319939 is currently private and is scheduled to be released on Dec 31, 2024.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM3319938 is currently private and is scheduled to be released on Dec 31, 2024.


text: live

text: Generic

text: Mus musculus

text: GEO accession GSM3319937 is currently private and is scheduled to be released on Dec 31, 2024.


Thermobifida fusca_phage_P318

text: MengMengHsiao Laboratory, National Chung Hsing University

text: live

text: Viral

characteristic: collection date

text: Thermostable actinobacteriophage

characteristic: description

text: Taiwan

characteristic: geo loc name

text: Thermobifida fusca

characteristic: host

text: Thermobifida fusca NTU22 in compost sample

characteristic: isolation source

text: Caudoviricetes

characteristic: temp

text: Viral sample from Thermobifida fusca


characteristic: External Id

text: Genomic and Applied Microbiology & Goettingen Genomics Laboratory

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: metaSPAdes v3.12.0

text: 3 m

characteristic: depth

text: NorthSea_HE361-13_B02: This biosample is a genome binned from a metagenomic assembly obtained from the North Sea water column HE361-13_3m (Biosample: SAMN02189713)

text: marginal sea biome

characteristic: env biome

text: coastal water

characteristic: env feature

text: sea water

characteristic: environmental sample

text: North Sea

text: coastal sea water column HE361-13 at a depth of 3m

text: 57.8305 N 6.9185 E

characteristic: lat lon

text: marine metagenome

characteristic: metagenome source

characteristic: metagenomic

text: This BioSample is a metagenomic assembly obtained from the marine metagenome BioSample: SAMN02189713

characteristic: note

text: Paracoccaceae bacterium

characteristic: organism

text: metagenomic assembly

characteristic: sample type


text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: metaSPAdes v3.12.0

characteristic: collection date

text: 3 m

text: NorthSea_HE361-13_B09: This biosample is a genome binned from a metagenomic assembly obtained from the North Sea water column HE361-13_3m (Biosample: SAMN02189713)

characteristic: description

text: marginal sea biome

text: coastal water

text: sea water

text: North Sea

characteristic: geo loc name

characteristic: isolate

text: 57.8305 N 6.9185 E

text: marine metagenome

text: Litorivicinus sp.

text: metagenomic assembly

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: metaSPAdes v3.12.0

text: 350 m

characteristic: depth

text: NorthSea_HE361-13_B13: This biosample is a genome binned from a metagenomic assembly obtained from the North Sea water column HE361-13_350m (Biosample: SAMN09758746)

text: marginal sea biome

characteristic: env biome

text: coastal water

text: sea water

text: North Sea

text: coastal sea water column HE361-13 at a depth of 350m

characteristic: isolation source

text: 57.8305 N 6.9185 E

text: marine metagenome

text: This BioSample is a metagenomic assembly obtained from the marine metagenome BioSample: SAMN09758746

text: Paracoccaceae bacterium

text: metagenomic assembly


text: live

text: Microbe, viral or environmental

text: metaSPAdes v3.12.0

text: 3 m

text: NorthSea_HE361-02_B20: This biosample is a genome binned from a metagenomic assembly obtained from the North Sea water column HE361-02_3m (Biosample: SAMN02189705)

text: marginal sea biome

text: coastal water

characteristic: env feature

text: sea water

characteristic: environmental sample

text: North Sea

text: coastal sea water column HE361-02 at a depth of 3m

text: 54.9667 N 7.6058 E

characteristic: lat lon

text: marine metagenome

characteristic: metagenome source

characteristic: metagenomic

text: This BioSample is a metagenomic assembly obtained from the marine metagenome BioSample: SAMN02189705

characteristic: note

text: Paracoccaceae bacterium

characteristic: organism

text: metagenomic assembly


text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: metaSPAdes v3.12.0

characteristic: collection date

text: 3 m

text: NorthSea_HE361-14_B39: This biosample is a genome binned from a metagenomic assembly obtained from the North Sea water column HE361-14_3m (Biosample: SAMN02189714)

characteristic: description

text: marginal sea biome

text: coastal water

text: sea water

text: North Sea

characteristic: geo loc name

text: coastal sea water column HE361-14 at a depth of 3m

text: 58.1657 N 5.1693 E

text: marine metagenome

text: This BioSample is a metagenomic assembly obtained from the marine metagenome BioSample: SAMN02189714

text: Paracoccaceae bacterium

text: metagenomic assembly

characteristic: sample type


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: metaSPAdes v3.12.0

text: 3 m

characteristic: depth

text: NorthSea_HE361-14_B44: This biosample is a genome binned from a metagenomic assembly obtained from the North Sea water column HE361-14_3m (Biosample: SAMN02189714)

text: marginal sea biome

text: coastal water

text: sea water

text: North Sea

characteristic: isolate

text: 58.1657 N 5.1693 E

text: marine metagenome

text: Paracoccaceae bacterium

text: metagenomic assembly

characteristic: title


Jishengella endophytica 202201

text: Ren Ji Hospital School of Medicine, Shanghai Jiao Tong University

text: live

text: Microbe, viral or environmental

text: Kui Hong

characteristic: biomaterial provider

text: Qing-Yi Xie

characteristic: collected by

text: China: Hainan

text: Qing-Yi Xie

characteristic: identified by

text: mangrove tree

characteristic: isolation source

text: Micromonospora endophytica

text: tissue sample

characteristic: strain

text: Microbe sample from Micromonospora endophytica

text: type strain of Jishengella endophytica

characteristic: type material


Candidatus Electrothrix sp. AX1

text: Aarhus University

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: collection date

characteristic: environmental sample

text: Netherlands: Cocksdorp

text: marine sediment

text: 53.147889 N 4.901167 E

characteristic: lat lon

text: marine sediment metagenome

characteristic: metagenome source

characteristic: metagenomic

text: This BioSample is a metagenomic assembly obtained from the marine sediment metagenome BioSample: SAMN09011644

characteristic: note

text: Candidatus Electrothrix sp. AX1

characteristic: organism

text: metagenomic assembly

text: Candidatus Electrothrix sp. AX1


Candidatus Electrothrix sp. LOE2

characteristic: External Id

text: Aarhus University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Denmark: Loegten Strand

characteristic: geo loc name

characteristic: isolate

text: marine sediment

text: 56.288184 N 10.381332 E

text: marine sediment metagenome

text: This BioSample is a metagenomic assembly obtained from the marine sediment metagenome BioSample: SAMN09011647

text: Candidatus Electrothrix sp. LOE2

text: metagenomic assembly

characteristic: sample type

text: Candidatus Electrothrix sp. LOE2

characteristic: title


Candidatus Electrothrix sp. MAN1_4

text: Aarhus University

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Australia: Mangrove

text: marine sediment

characteristic: isolation source

text: 38.229 S 145.309 E

text: marine sediment metagenome

text: This BioSample is a metagenomic assembly obtained from the marine sediment metagenome BioSample: SAMN09011646

text: Candidatus Electrothrix sp. MAN1_4

text: metagenomic assembly

text: Candidatus Electrothrix sp. MAN1_4


Candidatus Electrothrix sp. AX5

text: Aarhus University

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

characteristic: collection date

characteristic: environmental sample

text: Netherlands: Cocksdorp

text: marine sediment

text: 53.147889 N 4.901167 E

characteristic: lat lon

text: marine sediment metagenome

characteristic: metagenome source

text: Candidatus Electrothrix sp. AX5

text: metagenomic assembly

text: Candidatus Electrothrix sp. AX5


characteristic: External Id

text: University of Lausanne

characteristic: INSDC center name

text: live

text: Model organism or animal

text: Hyla perrini

characteristic: organism

text: Buccal cell swab

characteristic: tissue

text: Model organism or animal sample from Hyla perrini


text: University of Lausanne

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Model organism or animal

characteristic: isolate

text: Hyla perrini

text: Buccal cell swab


text: University of Lausanne

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

text: Hyla perrini

text: Buccal cell swab

characteristic: title


text: University of South Bohemia

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

text: adult

characteristic: dev stage

text: Amphilophus trimaculatus

text: not determined

characteristic: sex

text: fin clip

text: Amphilophus trimaculatus


gut microbiota under BaP

text: Yantai University

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: collection date

text: China:yantai

characteristic: geo loc name

text: Apostichopus japonicus

characteristic: host

text: Pseudomonadota

text: tissue sample

characteristic: sample type

text: Protebacteria

characteristic: strain

text: Microbe sample from Proteobacteria


Hymenobacter rubripertinctus CCM 8852

characteristic: External Id

text: Masaryk University

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: Fan Jiang

characteristic: collected by

characteristic: culture collection

text: Antarctica: Antarctic Ross Orogen, Northern Victoria Land, Inexpressible Island

text: Fan Jiang

characteristic: identified by

text: soil

characteristic: isolation source

text: 74.91694 S 163.71639 E

characteristic: lat lon

text: Hymenobacter rubripertinctus

characteristic: organism

text: culture collection, type strain

text: CCM 8852

text: Microbe sample from Hymenobacter rubripertinctus

text: type strain of Hymenobacter rubripertinctus

characteristic: type-material


text: animal feed

characteristic: IFSAC+ Category

text: FDA Center for Food Safety and Applied Nutrition

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: ProjectAccession

characteristic: PublicAccession

text: environmental/food/other

text: Ohio Department of Agriculture

text: Bacillus

characteristic: genus

text: USA:OH

text: pet food

text: pet food:FOODON_00002682

characteristic: ontological term

text: Bacillus sp. (in: firmicutes)

text: Animal feed

characteristic: source type

text: sp.

characteristic: species

text: Pathogen: environmental/food/other sample from Bacillus sp. (in: firmicutes)

characteristic: title


characteristic: External Id

text: Biochemistry and Medical Genetics, University of Manitoba

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: Bovan

characteristic: biomaterial provider

text: White leghorn

characteristic: breed

characteristic: cell cycle phase

text: Immature erythrocyte cells

characteristic: cell type

text: Gallus gallus

text: Erythrocyte cell

text: Bovan

characteristic: strain

text: FAIRE-seq of cell sample 1


whole genome

text: Seoul National University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: collection date

characteristic: culture collection

text: South Korea: Kwanak Mountain, Seoul

characteristic: geo loc name

text: soil

characteristic: isolation source

text: Streptomyces seoulensis

characteristic: organism

text: cell culture

characteristic: sample type

text: KCTC 9819

text: Microbe sample from Streptomyces seoulensis

text: type strain of Streptomyces seoulensis

characteristic: type-material


Protomyces sp. Strain C29 (OTU1)

characteristic: External Id

text: University of Helsinki

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

characteristic: NCBI submission package

characteristic: SRA accession

text: Peat soil on rock outcropping

characteristic: env biome

text: circa 5 km inland from sea

characteristic: env feature

text: plant

text: 11.9 Mbp

characteristic: estimated size

text: Finland: Helsinki, Kivikko District

text: Arabidopsis thaliana

characteristic: host

text: PMID: 28004784

text: peat soil

text: 60.23270 N 25.06191 E

characteristic: lat lon

text: Protomyces arabidopsidicola

text: haploid

characteristic: ploidy

text: asexual

characteristic: propagation

text: MIGS Eukaryotic sample from Protomyces sp. SC29 (OTU1)

characteristic: title


text: Konkuk University School of Medicine

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: Sun-Young LEE Address: Dept. of Internal Medicine, Konkuk University Medical Center, 120-1 Neungdong-ro, Gwangjin-gu, Seoul 05030 Korea

characteristic: biomaterial provider

text: Ji-Hoon KIM, Institute: BioCore. Co. Ltd., Seoul, Korea

characteristic: collected by

characteristic: collection date

text: Details are summarized in the attached file named Antrum 1-98

characteristic: description

text: South Korea

characteristic: geo loc name

text: Homo sapiens

characteristic: isolate

text: antrum (stomach)

characteristic: isolation source

text: Bacillus sp. (in: firmicutes)

text: Endoscopic biopsies x3

characteristic: samp_size (Library conc., pM)

text: Tissue sample

text: human body temperature

characteristic: temp

text: Microbe sample from Bacillus sp. (in: firmicutes)


characteristic: External Id

text: Konkuk University School of Medicine

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: SRA accession

text: Details are summarized in the attached file named Body 1-98

text: South Korea

text: Homo sapiens

characteristic: host

text: body (stomach)

text: Bacillus sp. (in: firmicutes)

characteristic: organism

text: Endoscopic biopsies x3

text: Tissue sample

characteristic: sample type

text: human body temperature


text: Konkuk University School of Medicine

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: biomaterial provider

text: Details are summarized in the attached file named Duodenum 1-98

text: South Korea

text: Homo sapiens

text: duodenal second portion

text: Bacillus sp. (in: firmicutes)

text: Endoscopic biopsies x3

text: Tissue sample

text: human body temperature

characteristic: title


Flavobacterium sp.

text: Masaryk University

text: live

text: Microbe, viral or environmental

text: Ivo Sedlacek

characteristic: collected by

characteristic: collection date

characteristic: culture-collection

text: whole-genome sequence of novel Flavobacterium sp. from Antarctica

characteristic: description

text: Antarctica: James Ross Island

characteristic: geo loc name

text: Stanislava Kralova

characteristic: identified by

text: sediment from stream

characteristic: isolation source

text: 63.8138889 S 57.8513889 W

characteristic: lat lon

text: Flavobacterium circumlabens

text: cell culture

text: CCM 8828

characteristic: strain

text: Flavobacterium sp.

text: type strain of Flavobacterium circumlabens

characteristic: type-material


Flavobacterium sp. P2683

characteristic: External Id

text: Masaryk University

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: Whole genome sequence of novel Flavobacterium sp. from Antarctica.

text: Antarctica: James Ross Island

text: Stanislava Kralova

text: regolith

text: 63.8069444 S 57.9250000 W

text: Flavobacterium cupreum

characteristic: organism

text: cell culture

characteristic: sample type

text: CCM 8825

text: Flavobacterium sp. P2683

text: type strain of Flavobacterium cupreum


Struthio camelus

text: Iridian Genomes

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

characteristic: SRA accession

text: adult

characteristic: dev stage

text: IRGN DASSF4NKEH

characteristic: isolate

text: captive bred

text: Struthio camelus

text: not determined

characteristic: sex

text: feather shaft pulp

characteristic: tissue

text: Model organism or animal sample from Struthio camelus


text: Chinese Academy of Science

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: intestine enviorment

characteristic: env biome

text: intestine

characteristic: env feature

text: animal manure

text: China:Beijing

characteristic: geo loc name

text: ob/ob mouse

characteristic: host

text: 8 weeks

characteristic: host age

text: male

characteristic: host sex

text: mGAM medium at 37 centigrade

text: ceacal content

characteristic: isolation source

text: 39.59 N 116.23 E

characteristic: lat lon

text: Thomasclavelia cocleata

text: no applicable

text: whole organism

characteristic: strain

text: Microbe sample from Thomasclavelia cocleata

characteristic: title


characteristic: External Id

text: Baylor Research Institute

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: in vitro

characteristic: cell source

characteristic: cell type

text: Ox mtDNA-pDC

characteristic: conditions

text: Homo sapiens

characteristic: organism

text: III

characteristic: replicate

text: CD4+Tcells_Ox mtDNA-pDC_III


text: Baylor Research Institute

text: live

text: Generic

characteristic: SRA accession

text: in vitro

text: Ox mtDNA-pDC

text: Homo sapiens

text: II

text: CD4+Tcells_Ox mtDNA-pDC_II


text: Baylor Research Institute

text: live

text: Generic

text: in vitro

text: Ox mtDNA-pDC

text: Homo sapiens

text: I

text: CD4+Tcells_Ox mtDNA-pDC_I


text: Baylor Research Institute

text: live

text: Generic

text: in vitro

text: CpGA-pDC

text: Homo sapiens

text: III


text: Baylor Research Institute

text: live

text: Generic

text: in vitro

text: CpGA-pDC

text: Homo sapiens

text: II


text: Baylor Research Institute

text: live

text: Generic

text: in vitro

text: CpGA-pDC

text: Homo sapiens

text: I


text: Baylor Research Institute

text: live

text: Generic

text: in vitro

text: Homo sapiens

text: III


text: Baylor Research Institute

text: live

text: Generic

text: in vitro

text: Homo sapiens

text: II


text: Baylor Research Institute

text: live

text: Generic

text: in vitro

text: Homo sapiens

text: I


text: Inha University

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: collection date

characteristic: culture-collection

text: South Korea: Yellow Sea

characteristic: geo loc name

text: Tidal flat sediment

characteristic: isolation source

text: Paracoccaceae bacterium

text: single cell

characteristic: sample type

text: IMCC 34051

text: Microbe sample from Paracoccaceae bacterium


characteristic: External Id

text: Biocant

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: hot spring

characteristic: env biome

text: hot spring sediment

characteristic: env feature

text: sediment

text: China: Yunnan Province, Tengchong County

text: hot spring sediment

characteristic: isolation-source

text: Calidithermus roseus

text: NBRC 110900

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Calidithermus roseus

characteristic: title

text: type strain of Meiothermus roseus

characteristic: type material


text: Biocant

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIGS:6.0

text: geothermally heated soil

text: geothermally heated soil

text: soil

text: China: Yunnan Province, Tengchong, Rehai National Park

text: geothermally heated soil

text: 24.56993 N 98.26291 E

characteristic: lat lon

text: Calidithermus terrae

characteristic: organism

text: DSM 26712

text: MIGS Cultured Bacterial/Archaeal sample from Calidithermus terrae

text: type strain of Meiothermus terrae


text: 506/508, Chemical Engineering, Texas A&M University

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: GFP labeled

characteristic: cg genotype

text: ATCC 2001

characteristic: cg strain

text: Cg monoculture

characteristic: culture condition

text: Nakaseomyces glabratus

text: Candida biofilms

characteristic: time


characteristic: External Id

text: Michigan State University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Plant

text: vegetative

characteristic: dev stage

text: Linderniella brevidens

characteristic: replicate

text: leaf

characteristic: tissue

text: Lindernia brevidens, well-watered, replicate 1

text: well-watered

characteristic: treatment


text: Michigan State University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Plant

text: vegetative

text: Linderniella brevidens

text: leaf

text: Lindernia brevidens, well-watered, replicate 2

characteristic: title

text: well-watered


text: Michigan State University

text: live

text: Plant

characteristic: NCBI submission model

characteristic: SRA accession

text: vegetative

text: Linderniella brevidens

characteristic: organism

text: leaf

text: Lindernia brevidens, well-watered, replicate 3

text: well-watered


text: Michigan State University

text: live

text: Plant

characteristic: NCBI submission package

text: vegetative

text: Linderniella brevidens

text: leaf

text: Lindernia brevidens, 3 days after drought, replicate 1

text: 3 days after drought


text: Michigan State University

text: live

text: Plant

text: vegetative

text: Linderniella brevidens

text: leaf

text: Lindernia brevidens, 3 days after drought, replicate 2

text: 3 days after drought


text: Michigan State University

text: live

text: Plant

text: vegetative

text: Linderniella brevidens

text: leaf

text: Lindernia brevidens, 3 days after drought, replicate 3

text: 3 days after drought


text: Michigan State University

text: live

text: Plant

text: vegetative

text: Linderniella brevidens

text: leaf

text: Lindernia brevidens, 7 days after drought, replicate 1

text: 7 days after drought


text: Michigan State University

text: live

text: Plant

text: vegetative

text: Linderniella brevidens

text: leaf

text: Lindernia brevidens, 7 days after drought, replicate 2

text: 7 days after drought


text: Michigan State University

text: live

text: Plant

text: vegetative

text: Linderniella brevidens

text: leaf

text: Lindernia brevidens, 7 days after drought, replicate 3

text: 7 days after drought


text: Michigan State University

text: live

text: Plant

text: vegetative

text: Linderniella brevidens

text: leaf

text: Lindernia brevidens, 10 days after drought, replicate 1

text: 10 days after drought


text: Michigan State University

text: live

text: Plant

text: vegetative

text: Linderniella brevidens

text: leaf

text: Lindernia brevidens, 10 days after drought, replicate 2

text: 10 days after drought


text: Michigan State University

text: live

text: Plant

text: vegetative

text: Linderniella brevidens

text: leaf

text: Lindernia brevidens, 10 days after drought, replicate 3

text: 10 days after drought


text: Michigan State University

text: live

text: Plant

text: vegetative

text: Linderniella brevidens

text: leaf

text: Lindernia brevidens, 14 days after drought, replicate 1

text: 14 days after drought


text: Michigan State University

text: live

text: Plant

text: vegetative

text: Linderniella brevidens

text: leaf

text: Lindernia brevidens, 14 days after drought, replicate 2

text: 14 days after drought


text: Michigan State University

text: live

text: Plant

text: vegetative

text: Linderniella brevidens

text: leaf

text: Lindernia brevidens, 14 days after drought, replicate 3

text: 14 days after drought


text: Michigan State University

text: live

text: Plant

text: vegetative

text: Linderniella brevidens

text: leaf

text: Lindernia brevidens, 24 hours after rehydration, replicate 1

text: 24 hours after rehydration


text: Michigan State University

text: live

text: Plant

text: vegetative

text: Linderniella brevidens

text: leaf

text: Lindernia brevidens, 24 hours after rehydration, replicate 2

text: 24 hours after rehydration


text: Michigan State University

text: live

text: Plant

text: vegetative

text: Linderniella brevidens

text: leaf

text: Lindernia brevidens, 24 hours after rehydration, replicate 3

text: 24 hours after rehydration


text: Michigan State University

text: live

text: Plant

text: vegetative

text: Linderniella brevidens

text: leaf

text: Lindernia brevidens, 48 hours after rehydration, replicate 1

text: 48 hours after rehydration


text: Michigan State University

text: live

text: Plant

text: vegetative

text: Linderniella brevidens

text: leaf

text: Lindernia brevidens, 48 hours after rehydration, replicate 2

text: 48 hours after rehydration


text: Michigan State University

text: live

text: Plant

text: vegetative

text: Linderniella brevidens

text: leaf

text: Lindernia brevidens, 48 hours after rehydration, replicate 3

text: 48 hours after rehydration


text: live

text: Microbe, viral or environmental

characteristic: collection date

text: China:Wuxi

characteristic: geo loc name

text: 1-wild-type strain was cultured to logarithmic phase in yeast nitrogen base (YNB) medium and collected.

characteristic: isolate

text: Nakaseomyces glabratus

text: cell culture

characteristic: sample type

text: ATCC 2001

characteristic: strain

text: Microbe sample from Nakaseomyces glabratus

text: type material of Cryptococcus glabratus

characteristic: type-material


characteristic: External Id

text: Jiangnan University

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: China:Wuxi

text: 2-wild-type strain was cultured to logarithmic phase in yeast nitrogen base (YNB) medium and collected.

text: Nakaseomyces glabratus

text: cell culture

text: ATCC 2001

text: type material of Cryptococcus glabratus


CgRDS2 knockout(normal) -1

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: China:Wuxi

text: 1-CgRDS2 knockout strain was cultured to logarithmic phase in yeast nitrogen base (YNB) medium and collected.

text: Nakaseomyces glabratus

text: cell culture

text: ATCC 2001

text: type material of Cryptococcus glabratus


CgRDS2 knockout(normal) -2

text: Jiangnan University

text: live

text: Microbe, viral or environmental

text: China:Wuxi

text: 2-CgRDS2 knockout strain was cultured to logarithmic phase in yeast nitrogen base (YNB) medium and collected.

text: Nakaseomyces glabratus

text: cell culture

text: ATCC 2001

text: type material of Cryptococcus glabratus


characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

text: China:Wuxi

text: 1-wild-type strain was cultured to logarithmic phase in yeast nitrogen base (YNB) medium, treated with 1.5 M NaCl for 30 min and then collected.

text: Nakaseomyces glabratus

text: cell culture

text: ATCC 2001

text: type material of Cryptococcus glabratus


text: Jiangnan University

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: China:Wuxi

text: 2-wild-type strain was cultured to logarithmic phase in yeast nitrogen base (YNB) medium, treated with 1.5 M NaCl for 30 min and then collected.

text: Nakaseomyces glabratus

text: cell culture

text: ATCC 2001

text: type material of Cryptococcus glabratus


CgRDS2 knockout(NaCl) -1

text: live

text: Microbe, viral or environmental

text: China:Wuxi

text: 1-CgRDS2 knockout strain was cultured to logarithmic phase in yeast nitrogen base (YNB) medium, treated with 1.5 M NaCl for 30 min and then collected.

text: Nakaseomyces glabratus

text: cell culture

text: ATCC 2001

characteristic: title

text: type material of Cryptococcus glabratus


CgRDS2 knockout(NaCl) -2

text: Jiangnan University

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: China:Wuxi

text: 2-CgRDS2 knockout strain was cultured to logarithmic phase in yeast nitrogen base (YNB) medium, treated with 1.5 M NaCl for 30 min and then collected.

text: Nakaseomyces glabratus

text: cell culture

text: ATCC 2001

text: type material of Cryptococcus glabratus


name: Uncultivated Verrucomicrobia bacterium SZUA-1035 genome recovered from SRR3577362

text: The University of Hong Kong

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: MEGAHIT v1.1.2

text: This BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: SRR3577362

characteristic: derived-from

text: true

characteristic: environmental sample

characteristic: genome coverage

text: USA:Guaymas Basin

text: Guaymas Basin Hydrothermal plume metagenome

characteristic: isolation source

text: 27.51583333 N 111.425 W

characteristic: lat lon

text: Bowtie 2 v2.2.8

text: hydrothermal vent metagenome

characteristic: metagenome source

text: true

characteristic: metagenomic

text: Verrucomicrobiota bacterium

text: CheckM v1.0.7

text: metagenomic assembly

text: Microbe sample from Verrucomicrobiota bacterium


name: Uncultivated Verrucomicrobia bacterium SZUA-1061 genome recovered from SRR3577362

text: The University of Hong Kong

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: MEGAHIT v1.1.2

characteristic: collection date

text: true

text: USA:Guaymas Basin

characteristic: geo loc name

characteristic: isolate

text: 27.51583333 N 111.425 W

text: Bowtie 2 v2.2.8

text: hydrothermal vent metagenome

text: true

text: Verrucomicrobiota bacterium

characteristic: organism

text: CheckM v1.0.7

text: metagenomic assembly

characteristic: sample type


name: Uncultivated Verrucomicrobia bacterium SZUA-1063 genome recovered from SRR3577362

characteristic: External Id

text: The University of Hong Kong

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: MEGAHIT v1.1.2

text: true

text: USA:Guaymas Basin

text: 27.51583333 N 111.425 W

text: Bowtie 2 v2.2.8

text: hydrothermal vent metagenome

text: true

text: Verrucomicrobiota bacterium

text: CheckM v1.0.7

text: metagenomic assembly


name: Uncultivated Verrucomicrobia bacterium SZUA-1068 genome recovered from SRR3577362

text: The University of Hong Kong

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: SRA accession

text: MEGAHIT v1.1.2

characteristic: derived-from

text: true

characteristic: environmental sample

characteristic: genome coverage

text: USA:Guaymas Basin

text: 27.51583333 N 111.425 W

text: Bowtie 2 v2.2.8

text: hydrothermal vent metagenome

text: true

text: Verrucomicrobiota bacterium

text: CheckM v1.0.7

text: metagenomic assembly

characteristic: title


name: Uncultivated Gemmatimonadetes bacterium SZUA-1081 genome recovered from SRR3577362

text: The University of Hong Kong

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: MEGAHIT v1.1.2

characteristic: collection date

text: true

text: USA:Guaymas Basin

characteristic: isolation source

text: 27.51583333 N 111.425 W

characteristic: lat lon

text: Bowtie 2 v2.2.8

text: hydrothermal vent metagenome

characteristic: metagenome source

text: true

characteristic: metagenomic

text: Gemmatimonadota bacterium

text: CheckM v1.0.7

text: metagenomic assembly

text: Microbe sample from Gemmatimonadota bacterium


name: Uncultivated Verrucomicrobia bacterium SZUA-1097 genome recovered from SRR2046235 SRR2046236 SRR2046222

characteristic: External Id

text: The University of Hong Kong

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: MEGAHIT v1.1.2

text: This BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: SRR2046235 SRR2046236 SRR2046222

text: true

text: Atlantic Ocean:Mid Cayman Rise

characteristic: geo loc name

characteristic: isolate

text: Dilute Hydrothermal Plume

text: 18.37636666 N 81.79808333 W

text: Bowtie 2 v2.2.8

text: hydrothermal vent metagenome

text: true

text: Verrucomicrobiota bacterium

characteristic: organism

text: CheckM v1.0.7

text: metagenomic assembly

characteristic: sample type


name: Uncultivated Acidobacteria bacterium SZUA-1099 genome recovered from SRR2046235 SRR2046236 SRR2046222

text: The University of Hong Kong

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: SRA accession

text: MEGAHIT v1.1.2

text: true

text: Atlantic Ocean:Mid Cayman Rise

text: Dilute Hydrothermal Plume

text: 18.37636666 N 81.79808333 W

text: Bowtie 2 v2.2.8

text: hydrothermal vent metagenome

text: true

text: Acidobacteriota bacterium

text: CheckM v1.0.7

text: metagenomic assembly

text: Microbe sample from Acidobacteriota bacterium


name: Uncultivated Acidobacteria bacterium SZUA-1123 genome recovered from SRR2046235 SRR2046236 SRR2046222

text: The University of Hong Kong

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: MEGAHIT v1.1.2

characteristic: collection date

characteristic: derived-from

text: true

characteristic: environmental sample

characteristic: genome coverage

text: Atlantic Ocean:Mid Cayman Rise

text: Dilute Hydrothermal Plume

text: 18.37636666 N 81.79808333 W

text: Bowtie 2 v2.2.8

text: hydrothermal vent metagenome

text: true

text: Acidobacteriota bacterium

text: CheckM v1.0.7

text: metagenomic assembly

characteristic: title


name: Uncultivated Verrucomicrobia bacterium SZUA-1142 genome recovered from SRR2046235 SRR2046236 SRR2046222

characteristic: External Id

text: The University of Hong Kong

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: MEGAHIT v1.1.2

text: true

text: Atlantic Ocean:Mid Cayman Rise

text: Dilute Hydrothermal Plume

characteristic: isolation source

text: 18.37636666 N 81.79808333 W

characteristic: lat lon

text: Bowtie 2 v2.2.8

text: hydrothermal vent metagenome

characteristic: metagenome source

text: true

characteristic: metagenomic

text: Verrucomicrobiota bacterium

text: CheckM v1.0.7

text: metagenomic assembly


name: Uncultivated Acidobacteria bacterium SZUA-1168 genome recovered from SRR2046238 SRR2046237 SRR2046221

text: The University of Hong Kong

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: MEGAHIT v1.1.2

text: This BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: SRR2046238 SRR2046237 SRR2046221

text: true

text: Atlantic Ocean:Mid Cayman Rise

characteristic: geo loc name

characteristic: isolate

text: Hydrothermal Plume

text: 18.54650166 N 81.71823333 W

text: Bowtie 2 v2.2.8

text: hydrothermal vent metagenome

text: true

text: Acidobacteriota bacterium

characteristic: organism

text: CheckM v1.0.7

text: metagenomic assembly

characteristic: sample type


name: Uncultivated Gemmatimonadetes bacterium SZUA-1190 genome recovered from SRR2046238 SRR2046237 SRR2046221

text: The University of Hong Kong

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: MEGAHIT v1.1.2

characteristic: collection date

text: true

text: Atlantic Ocean:Mid Cayman Rise

text: Hydrothermal Plume

text: 18.54650166 N 81.71823333 W

text: Bowtie 2 v2.2.8

text: hydrothermal vent metagenome

text: true

text: Gemmatimonadota bacterium

text: CheckM v1.0.7

text: metagenomic assembly


name: Uncultivated Acidobacteria bacterium SZUA-1208 genome recovered from SRR1217367 SRR1217459 SRR1217564 SRR1217566

characteristic: External Id

text: The University of Hong Kong

characteristic: INSDC center name

text: live

text: Microbe, viral or environmental

text: MEGAHIT v1.1.2

text: This BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: SRR1217367 SRR1217459 SRR1217564 SRR1217566

characteristic: derived-from

text: true

characteristic: environmental sample

characteristic: genome coverage

text: Pacific Ocean:Lau Basin

text: Kilo Moana Hydrothermal plume 60m

text: 20.05382503 S 176.13358938 W

text: Bowtie 2 v2.2.8

text: hydrothermal vent metagenome

text: true

text: Acidobacteriota bacterium

text: CheckM v1.0.7

text: metagenomic assembly

characteristic: title


name: Uncultivated Gemmatimonadetes bacterium SZUA-1226 genome recovered from SRR1217367 SRR1217459 SRR1217564 SRR1217566

text: The University of Hong Kong

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: MEGAHIT v1.1.2

text: true

text: Pacific Ocean:Lau Basin

text: Kilo Moana Hydrothermal plume 60m

characteristic: isolation source

text: 20.05382503 S 176.13358938 W

characteristic: lat lon

text: Bowtie 2 v2.2.8

text: hydrothermal vent metagenome

characteristic: metagenome source

text: true

characteristic: metagenomic

text: Gemmatimonadota bacterium

text: CheckM v1.0.7

text: metagenomic assembly


name: Uncultivated Rhodobacteraceae bacterium SZUA-1395 genome recovered from ERS1370020

text: The University of Hong Kong

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: MEGAHIT v1.1.2

text: This BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: ERS1370020

text: true

text: Atlantic Ocean:Mid Cayman Rise

characteristic: geo loc name

characteristic: isolate

text: Mid-Cayman Rise Vent Fluids

text: 18.5466 N 81.7182 W

text: Bowtie 2 v2.2.8

text: hydrothermal vent metagenome

text: true

text: Paracoccaceae bacterium

characteristic: organism

text: CheckM v1.0.7

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Paracoccaceae bacterium


HotFries

characteristic: External Id

text: UMBC

characteristic: INSDC center name

text: live

text: MIGS.vi

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: collection date

text: 15 cm

characteristic: depth

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: 152 m

characteristic: elev

text: Temperate deciduous forests

characteristic: env biome

text: garden soil

characteristic: env feature

text: soil

text: USA: Owings Mills, MD

text: Direct isolation using a lawn of S. scabiei RL-34

text: 39.441938 N 76.785539 W

text: Caudoviricetes

text: Lytic

characteristic: propagation

text: 1 mL

text: MIGS Viral sample from Caudoviricetes


Moozy

text: UMBC

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS.vi

text: 2.5 cm

text: Keywords: GSC:MIxS;MIGS:6.0

text: 165 m

text: Temperate deciduous forests

text: surface soil

text: soil

text: USA: Olney, MD

text: 39.149563 N 77.068427 W

characteristic: lat lon

text: Caudoviricetes

text: Lytic

text: 1 mL

text: MIGS Viral sample from Caudoviricetes

characteristic: title


Rainydai

characteristic: External Id

text: UMBC

characteristic: INSDC center name

text: live

text: MIGS.vi

text: Surface

text: Keywords: GSC:MIxS;MIGS:6.0

text: 6 m

text: Temperate deciduous forests

text: surface soil

text: soil

text: USA: Rosedale, MD

characteristic: geo loc name

text: 39.359874 N 76.497645 W

text: Caudoviricetes

characteristic: organism

text: Lytic

text: 1 mL

text: MIGS Viral sample from Caudoviricetes


RavenPuff

text: UMBC

text: live

text: MIGS.vi

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: collection date

text: Surface

text: Keywords: GSC:MIxS;MIGS:6.0

text: 146 m

text: Temperate deciduous forests

text: surface soil

text: soil

text: USA: Catonsville, MD

text: 39.281463 N 76.751965 W

text: Caudoviricetes

text: Lytic

text: 1 mL

text: MIGS Viral sample from Caudoviricetes


text: UMBC

text: live

text: MIGS.vi

text: Surface

characteristic: depth

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: 3 m

characteristic: elev

text: Temperate deciduous forests

characteristic: env biome

text: garden soil

text: soil

text: India: Kottayam

text: 9.58 N 76.52 E

text: Caudoviricetes

text: Lytic

text: 1 mL

text: MIGS Viral sample from Caudoviricetes


SendItCs

text: UMBC

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: MIGS.vi

text: Surface

text: Keywords: GSC:MIxS;MIGS:6.0

text: 55 m

text: Temperate deciduous forests

text: garden soil

characteristic: env feature

text: soil

text: USA: Ellicott City, MD

text: 39.261552 N 76.80948 W

text: Caudoviricetes

text: Lytic

characteristic: propagation

text: 1 mL

text: MIGS Viral sample from Caudoviricetes


text: Aviv Regev, The Broad Institute

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

text: delta CAGL0M09955g

characteristic: genotype

text: log

characteristic: growth phase

text: Nakaseomyces glabratus

text: C

characteristic: replicate

text: Yeast culture (BMW) - log phase

text: glab ko 9955_C

characteristic: title


characteristic: External Id

text: Aviv Regev, The Broad Institute

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: delta CAGL0M09955g

text: log

text: Nakaseomyces glabratus

characteristic: organism

text: B

text: Yeast culture (BMW) - log phase

text: glab ko 9955_B


text: Aviv Regev, The Broad Institute

text: live

text: Generic

characteristic: SRA accession

text: delta CAGL0M09955g

text: log

text: Nakaseomyces glabratus

text: A

text: Yeast culture (BMW) - log phase

text: glab ko 9955_A


text: Aviv Regev, The Broad Institute

text: live

text: Generic

text: delta CAGL0D00682g

text: log

text: Nakaseomyces glabratus

text: C

text: Yeast culture (BMW) - log phase

text: gla ko 2_C


text: Aviv Regev, The Broad Institute

text: live

text: Generic

text: delta CAGL0D00682g

text: log

text: Nakaseomyces glabratus

text: B

text: Yeast culture (BMW) - log phase

text: gla ko 2_B


text: Aviv Regev, The Broad Institute

text: live

text: Generic

text: delta CAGL0D00682g

text: log

text: Nakaseomyces glabratus

text: A

text: Yeast culture (BMW) - log phase

text: gla ko 2 _A


text: Aviv Regev, The Broad Institute

text: live

text: Generic

text: wild type

text: log

text: Nakaseomyces glabratus

text: C

text: Yeast culture (BMW) - log phase

text: cglab wt_C


text: Aviv Regev, The Broad Institute

text: live

text: Generic

text: wild type

text: log

text: Nakaseomyces glabratus

text: B

text: Yeast culture (BMW) - log phase

text: cglab wt_B


text: Aviv Regev, The Broad Institute

text: live

text: Generic

text: wild type

text: log

text: Nakaseomyces glabratus

text: A

text: Yeast culture (BMW) - log phase

text: cglab wt_A


Kronos

text: University of South Carolina

text: live

text: Microbe, viral or environmental

text: Louis Berrios

characteristic: collected by

characteristic: collection date

text: Kronos is a newly isolated bacteriophage that infects Caulobacter sp. CBR1

characteristic: description

text: USA: Columbia, SC

characteristic: geo loc name

text: Caulobacter sp. CBR1

characteristic: host

text: Congaree Riverbank

characteristic: isolation source

characteristic: lab host

text: Caudoviricetes

text: whole organism

characteristic: sample type

text: Kronos

characteristic: strain

text: Bacteriophage Siphoviridae Kronos


text: Broad Institute

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Pathogen.cl

text: Irrua Specialist Teaching Hospital

text: Nigeria: EDO

text: Homo sapiens

text: Lassa fever

characteristic: host disease

characteristic: host subject id

text: blood

text: blood plasma

text: 6.733120 N 6.190413 E

characteristic: lat lon

text: Lassa mammarenavirus

text: no passage

text: Pathogen: clinical or host-associated sample from Lassa mammarenavirus


characteristic: External Id

text: Broad Institute

characteristic: INSDC center name

text: live

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Irrua Specialist Teaching Hospital

text: Nigeria: ONDO

text: Homo sapiens

text: Lassa fever

text: blood

text: blood plasma

text: 6.733120 N 6.190413 E

text: Lassa mammarenavirus

characteristic: organism

text: no passage

characteristic: title


text: Broad Institute

text: live

text: Pathogen.cl

text: Irrua Specialist Teaching Hospital

characteristic: collected by

characteristic: collection date

text: Nigeria: EDO

characteristic: geo loc name

text: Homo sapiens

characteristic: host

text: Lassa fever

text: blood plasma

characteristic: isolation source

text: 6.733120 N 6.190414 E

text: Lassa mammarenavirus


text: Broad Institute

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Pathogen.cl

text: Irrua Specialist Teaching Hospital

text: Nigeria: KOGI

text: Homo sapiens

text: Lassa fever

text: blood plasma

text: 6.733120 N 6.190415 E

text: Lassa mammarenavirus


text: Broad Institute

text: live

characteristic: INSDC status

text: Pathogen.cl

text: Irrua Specialist Teaching Hospital

text: Nigeria: ONDO

text: Homo sapiens

text: Lassa fever

characteristic: host disease

text: blood plasma

text: 6.733120 N 6.190416 E

text: Lassa mammarenavirus


text: Broad Institute

text: live

text: Pathogen.cl

text: Irrua Specialist Teaching Hospital

text: Nigeria: EDO

text: Homo sapiens

text: Lassa fever

characteristic: host subject id

text: blood plasma

text: 6.733120 N 6.190417 E

characteristic: lat lon

text: Lassa mammarenavirus


characteristic: External Id

text: Broad Institute

characteristic: INSDC center name

text: live

text: Pathogen.cl

text: Irrua Specialist Teaching Hospital

text: Nigeria: DELTA

text: Homo sapiens

text: Lassa fever

text: blood plasma

text: 6.733120 N 6.190418 E

text: Lassa mammarenavirus


Type strain of Aquabacterium

text: Yunnan University

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: culture collection

text: We sequenced the genome of Aquabacterium sp. for further insight into its adaptation of environment and study on the phylogeny of Aquabacterium.

characteristic: description

text: China: Tibet

text: hot spring

text: Caldimonas tepidiphila

text: sediment

characteristic: sample type

text: YIM 730274

characteristic: strain

text: Microbe sample from Aquabacterium sp.

text: type strain of Aquabacterium tepidiphilum

characteristic: type material


text: Chulalongkorn University

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: China

characteristic: geo loc name

text: Acanthus ilicifolius

characteristic: host

text: root

text: Micromonospora endophytica

characteristic: organism

text: draft genome

text: JCM 18317

text: Microbe sample from Micromonospora endophytica

characteristic: title

text: type strain of Jishengella endophytica

characteristic: type-material


Shanghai river sediment

text: East China Normal University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: China: Shanghai

text: high nitrogen enrichment

characteristic: isolate

text: sediment

characteristic: isolation source

text: Pseudomonadota

text: sediment sample

text: Microbe sample from Proteobacteria


characteristic: External Id

text: Dalhousie University

characteristic: INSDC center name

text: live

characteristic: NCBI submission model

text: MIGS.ba

characteristic: NCBI submission package

characteristic: bin number

text: 120-350 meter

characteristic: depth

text: Keywords: GSC:MIxS;MIGS:6.0

text: meromictic lake

characteristic: env biome

text: water column

characteristic: env feature

text: water

characteristic: environmental sample

text: Canada: Powell Lake South basin, British Columbia

text: lake water

characteristic: isolation-source

text: 49.92 N 124.53 W

characteristic: lat lon

text: lake water metagenome

characteristic: metagenome source

characteristic: metagenomic

text: This BioSample is a metagenomic assembly obtained from the lake water metagenome BioSample: SAMN09979681

characteristic: note

text: Chloroflexota bacterium

text: metagenomic assembly

characteristic: sample-type

text: MIGS Cultured Bacterial/Archaeal sample from Chloroflexota bacterium


text: Dalhousie University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: collection date

text: 120-350 meter

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: meromictic lake

text: water column

text: water

characteristic: geo loc name

characteristic: isolate

text: lake water

text: 49.92 N 124.53 W

text: lake water metagenome

text: Bacteroidota bacterium

characteristic: organism

text: metagenomic assembly

text: MIGS Cultured Bacterial/Archaeal sample from Bacteroidota bacterium

characteristic: title


characteristic: External Id

text: Chinese Academy of Sciences

characteristic: INSDC center name

text: live

text: MIGS.ba

characteristic: NCBI submission model

text: MIGS/MIMS/MIMARKS.host-associated

characteristic: NCBI submission package

text: Keywords: GSC:MIxS;MIGS:6.0

text: intestine enviorment

characteristic: env biome

text: intestine

characteristic: env feature

text: animal manure

text: China:Beijing

text: ob/ob mouse

characteristic: host

text: mGAM medium at 37 centigrade

text: 39.59 N 116.23 E

text: Parablautia intestinalis

text: no applicable

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Parablautia intestinalis

text: type strain of Parablautia intestinalis

characteristic: type-material


name: Unclassified Elusimicrobia order F11 Bacterium

text: Colorado School of Mines

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: MAG taxonomy inferred using GtdbTk 0.0.6

characteristic: environmental sample

text: USA:California

text: Advanced Water Purification Facility

characteristic: isolation source

text: 33.69 N 117.94 W

characteristic: lat lon

text: wastewater metagenome

characteristic: metagenome source

characteristic: metagenomic

text: This BioSample is a metagenomic assembly obtained from the wastewater metagenome BioSample: SAMN08289390, SAMN08289391, SAMN08289394, SAMN08289396, SAMN08289398, and SAMN08289399.

characteristic: note

text: Elusimicrobiota bacterium

text: metagenomic assembly

characteristic: sample-type

text: Metagenome Assembled Genomes from an Advanced Water Purification Facility


Unclassified Leptospirae Bacterium

characteristic: External Id

text: Colorado School of Mines

characteristic: INSDC center name

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: collection date

characteristic: description

text: USA:California

characteristic: geo loc name

characteristic: isolate

text: Advanced Water Purification Facility

text: 33.69 N 117.94 W

text: wastewater metagenome

text: Spirochaetota bacterium

characteristic: organism

text: metagenomic assembly

characteristic: title


name: Unclassified Spirochaetes Class UBA12135 Bacterium

text: Colorado School of Mines

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: USA:California

text: Advanced Water Purification Facility

text: 33.69 N 117.94 W

text: wastewater metagenome

text: Spirochaetota bacterium

text: metagenomic assembly


Lindernia subracemosa

text: Michigan State University

text: live

text: Plant

text: Eberhard Fischer, Dorothea Bartels

characteristic: biomaterial provider

text: Eberhard Fischer

characteristic: collected by

text: Lindernia subracemosa genome assembly and annotation

text: vegetative

characteristic: dev stage

text: Rwanda: Uwinka

text: BG-Bonn 19990-2

text: Lindernia subracemosa

text: KOBL:BG-Bonn 19990-2

text: leaf

characteristic: tissue

text: Plant sample from Lindernia subracemosa


name: Lindernia brevidens genome assembly and annotation

characteristic: External Id

text: Michigan State University

text: live

text: Plant

text: Eberhard Fisher, Dorothea Bartels

text: Eberhard Fisher

text: vegetative

text: Kenya:Taita Hills

text: E. Fischer 8022

text: Linderniella brevidens

text: leaf

text: Plant sample from Lindernia brevidens


text: Department of Biochemistry and Molecular Genetics, University of Alabama at Birmingham

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: Homo sapiens

text: GEO accession GSM3383743 is currently private and is scheduled to be released on Dec 31, 2024.


text: live

characteristic: INSDC status

text: Generic

text: Homo sapiens

text: GEO accession GSM3383742 is currently private and is scheduled to be released on Dec 31, 2024.


text: live

text: Generic

text: Homo sapiens

text: GEO accession GSM3383741 is currently private and is scheduled to be released on Dec 31, 2024.


text: live

text: Generic

text: Homo sapiens

text: GEO accession GSM3383740 is currently private and is scheduled to be released on Dec 31, 2024.


text: live

text: Generic

text: Homo sapiens

text: GEO accession GSM3383739 is currently private and is scheduled to be released on Dec 31, 2024.


text: live

text: Generic

text: Homo sapiens

text: GEO accession GSM3383738 is currently private and is scheduled to be released on Dec 31, 2024.


text: live

text: Generic

text: Homo sapiens

text: GEO accession GSM3383737 is currently private and is scheduled to be released on Dec 31, 2024.


text: live

text: Generic

text: Homo sapiens

text: GEO accession GSM3383736 is currently private and is scheduled to be released on Dec 31, 2024.


text: live

text: Generic

text: Homo sapiens

text: GEO accession GSM3383735 is currently private and is scheduled to be released on Dec 31, 2024.


text: Chinese Academy of Sciences

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.host-associated

characteristic: collection date

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: intestine enviorment

characteristic: env biome

text: intestine

characteristic: env feature

text: animal manure

text: China:Beijing

characteristic: geo loc name

text: ob/ob mouse

characteristic: host

text: mGAM medium at 37 centigrade

text: 39.59 N 116.23 E

characteristic: lat lon

text: Parablautia muri

text: no applicable

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Parablautia muri

text: type strain of Parablautia muri

characteristic: type-material


text: Institute of Life Sciences

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Dr. Subrata K Das

characteristic: collected by

text: Whole genome sequence of Idiomarina andamanensis W-5T (LMG 29773T= JCM 31645T), isolated from the Andaman Sea water , India

text: India: Andaman Sea

text: sea water

characteristic: isolation source

text: 11.99833 N 92.97556 E

text: Pseudidiomarina andamanensis

characteristic: organism

text: whole organism

characteristic: sample type

characteristic: title

text: type strain of Idiomarina andamanensis

characteristic: type material


characteristic: External Id

text: National Taiwan University

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: SRA accession

text: Mus musculus

text: Cerebral cortex

text: astrocytes

characteristic: tissue

characteristic: tracking number


text: National Taiwan University

characteristic: INSDC first public

text: live

text: Generic

text: Mus musculus

text: Cerebral cortex

text: inhibitory neurons

text: Inhibitory neuron_F1r


text: National Taiwan University

characteristic: INSDC last update

text: live

text: Generic

text: Mus musculus

text: Cerebral cortex

text: inhibitory neurons

text: Inhibitory neuron_F1i


text: National Taiwan University

text: live

text: Generic

characteristic: NCBI submission model

text: Mus musculus

text: Cerebral cortex

text: excitatory neurons

text: Excitatory neuron_F1r


text: National Taiwan University

text: live

text: Generic

characteristic: NCBI submission package

text: Mus musculus

text: Cerebral cortex

text: excitatory neurons

text: Excitatory neuron_F1i


Methylophilaceae sp.

text: live

text: Microbe, viral or environmental

characteristic: collection date

text: China: lake of Nanjing Tech University

characteristic: geo loc name

text: Danica

characteristic: host

text: lake of Nanjing Tech University

text: Methylophilus methylotrophus

text: cell culture

characteristic: strain

text: Microbe sample from Methylophilus methylotrophus


text: University of Florida

text: live

text: Plant

text: adult

characteristic: dev stage

text: Taiwan

text: Asimitellaria formosana

characteristic: organism

text: leaf

text: Plant sample from Asimitellaria formosana

characteristic: title


characteristic: External Id

text: University of Florida

characteristic: INSDC center name

text: live

text: Plant

text: adult

text: Chile

text: Saxifraga bicuspidata

text: leaf

text: Plant sample from Saxifraga bicuspidata


text: chinese academy of sciences

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: environmental sample

characteristic: isolate

text: marine water

characteristic: isolation source

text: marine metagenome

characteristic: metagenome source

characteristic: metagenomic

text: Chloroflexota bacterium

text: metagenomic assembly

characteristic: sample type

text: Microbe sample from Chloroflexota bacterium


characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Homo sapiens

text: GEO accession GSM3391725 is currently private and is scheduled to be released on Dec 31, 2024.


text: live

text: Generic

text: Homo sapiens

characteristic: organism

text: GEO accession GSM3391736 is currently private and is scheduled to be released on Dec 31, 2024.


text: Department of Biochemistry and Molecular Genetics, University of Alabama at Birmingham

text: live

text: Generic

text: Homo sapiens

text: GEO accession GSM3391735 is currently private and is scheduled to be released on Dec 31, 2024.

characteristic: title


characteristic: External Id

text: live

text: Generic

text: Homo sapiens

text: GEO accession GSM3391734 is currently private and is scheduled to be released on Dec 31, 2024.


characteristic: INSDC center name

text: live

text: Generic

text: Homo sapiens

text: GEO accession GSM3391733 is currently private and is scheduled to be released on Dec 31, 2024.


text: live

characteristic: INSDC status

text: Generic

text: Homo sapiens

text: GEO accession GSM3391732 is currently private and is scheduled to be released on Dec 31, 2024.


text: live

text: Generic

text: Homo sapiens

text: GEO accession GSM3391731 is currently private and is scheduled to be released on Dec 31, 2024.


text: live

text: Generic

text: Homo sapiens

text: GEO accession GSM3391730 is currently private and is scheduled to be released on Dec 31, 2024.


text: live

text: Generic

text: Homo sapiens

text: GEO accession GSM3391729 is currently private and is scheduled to be released on Dec 31, 2024.


text: live

text: Generic

text: Homo sapiens

text: GEO accession GSM3391728 is currently private and is scheduled to be released on Dec 31, 2024.


text: live

text: Generic

text: Homo sapiens

text: GEO accession GSM3391727 is currently private and is scheduled to be released on Dec 31, 2024.


text: live

text: Generic

text: Homo sapiens

text: GEO accession GSM3391726 is currently private and is scheduled to be released on Dec 31, 2024.


Ginkgo biloba

text: Iridian Genomes

text: live

text: Plant

text: Ginkgo biloba

characteristic: description

text: adult

characteristic: dev stage

text: NIH grounds

characteristic: ecotype

text: USA: Bethesda, MD

characteristic: geo loc name

text: IRGN W51LNC3ZPA

text: Ginkgo biloba

text: leaf

characteristic: tissue

text: Plant sample from Ginkgo biloba