text: Genome Dynamics Lab, Life Science, Chung-Ang University

text: live

text: Generic

text: breast cancer

characteristic: cell type

text: PPMP

characteristic: genotype

text: Homo sapiens

characteristic: time

text: PPMP rep2


status: PUBLIC

characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

tag: attribute

characteristic: cell line

text: breast cancer

text: PPMP

text: Homo sapiens

characteristic: organism

text: PPMP rep1

characteristic: title


text: live

text: Generic

text: breast cancer

text: Vehicle

text: Homo sapiens

text: Vehicle rep2


text: live

text: Generic

text: breast cancer

text: Vehicle

text: Homo sapiens

text: Vehicle rep1


characteristic: Attribute

text: Research Center for Eco-Environmental Sciences

text: live

text: Metagenome or environmental

text: China

text: swine manure

text: 39.4 N 115.7 E

text: manure metagenome

text: Metagenome or environmental sample from manure metagenome


text: live

text: Metagenome or environmental

text: China

text: anaerobic digester

text: 39.4 N 115.7 E

text: anaerobic digester metagenome

text: Metagenome or environmental sample from anaerobic digester metagenome


text: live

text: Metagenome or environmental

text: China

text: active suldge

text: 39.4 N 115.7 E

text: synthetic metagenome

text: Metagenome or environmental sample from synthetic metagenome


ischemia-reperfusion treated WT retina

text: Sun-yet sen University

text: live

text: Model organism or animal

text: 1 month

characteristic: age

text: Retinas were collected at 48hrs after treatment

characteristic: description

text: Mus musculus

text: pooled male and female

characteristic: sex

characteristic: strain

text: retina

characteristic: tissue

text: Ischemia-reperfusion treated retinas from WT mice


Control-untreated

characteristic: External Id

text: University of Agriculture in Krakow

characteristic: INSDC center name

text: live

text: Plant

text: Julia F1

characteristic: cultivar

text: Plants uder control condition

text: juvenile

text: Poland

text: Solanum lycopersicum

text: Leaf

text: Plants uder control condition

text: control condition

characteristic: treatment


Planticine

text: University of Agriculture in Krakow

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Plant

text: Julia F1

text: Plants under Planticine treatment

text: juvenile

text: Poland

text: Solanum lycopersicum

text: Leaf

text: Plants under Planticine treatment

text: Planticine treatment


text: CNRS - Universite de Montpellier

text: live

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: James L. Patton

text: Adult

text: Peru: Amazonas, vicinity of Huampami (Aguaruna village), Rio Cenepa

characteristic: isolate

text: Cabassous unicinctus

text: Tissue

text: male

text: Frozen

text: Muscle

text: Model organism or animal sample from Cabassous unicinctus


text: dbGaP

text: live

text: Generic

text: RNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Peripheral blood

characteristic: body site

text: Peripheral Blood Mononuclear Cells

characteristic: histological type

text: No

characteristic: is tumor

text: Homo sapiens

characteristic: organism

text: female

text: Collection

characteristic: study design

text: Immunity

characteristic: study disease

characteristic: study name

text: Yes

characteristic: subject is affected

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Non-tumor RNA sample from Peripheral blood of a human female participant in the dbGaP study Infant Immune Responses to Early Life Vaccinations

characteristic: title


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: RNA

text: Peripheral blood

text: Peripheral Blood Mononuclear Cells

text: No

text: Homo sapiens

text: female

characteristic: sex

text: Collection

text: Immunity

text: Infant Immune Responses to Early Life Vaccinations

text: Yes


text: dbGaP

text: live

text: Generic

text: RNA

characteristic: analyte type

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Peripheral blood

characteristic: body site

text: Peripheral Blood Mononuclear Cells

characteristic: histological type

text: No

characteristic: is tumor

text: Homo sapiens

characteristic: organism

text: male

text: Collection

characteristic: study design

text: Immunity

characteristic: study disease

text: Yes

text: Non-tumor RNA sample from Peripheral blood of a human male participant in the dbGaP study Infant Immune Responses to Early Life Vaccinations


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: DNA

text: Blood

text: GRU

text: No

text: Homo sapiens

text: female

text: Case Set

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Non-tumor DNA sample from Blood of a human female participant in the dbGaP study The Genetic Basis of Progression in Multiple Sclerosis

characteristic: title


text: dbGaP

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: DNA

characteristic: analyte type

text: Blood

text: GRU

text: No

text: Homo sapiens

text: female

characteristic: sex

text: Case Set

text: The Genetic Basis of Progression in Multiple Sclerosis


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Blood

characteristic: body site

text: HMB

text: No

characteristic: is tumor

text: Homo sapiens

characteristic: organism

text: female

text: Case Set


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: DNA

text: Blood

text: DS-MS

text: No

text: Homo sapiens

text: female

text: Case Set

characteristic: study design


text: dbGaP

text: live

text: Generic

text: DNA

text: Blood

text: HMB

text: No

text: Homo sapiens

text: male

text: Case Set

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

characteristic: submitter handle

text: Non-tumor DNA sample from Blood of a human male participant in the dbGaP study The Genetic Basis of Progression in Multiple Sclerosis


text: dbGaP

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: DNA

text: Blood

text: GRU

text: No

text: Homo sapiens

text: male

text: Case Set

characteristic: title


text: dbGaP

text: live

text: Generic

characteristic: NCBI submission package

text: DNA

characteristic: analyte type

characteristic: biospecimen repository

text: Blood

text: DS-MS-COL

text: No

text: Homo sapiens

text: female

characteristic: sex

text: Case Set


text: dbGaP

text: live

text: Generic

text: DNA

characteristic: biospecimen repository sample id

text: Blood

characteristic: body site

text: DS-MS

text: No

characteristic: is tumor

text: Homo sapiens

characteristic: organism

text: male

text: Case Set


characteristic: External Id

text: dbGaP

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: DNA

text: Blood

text: DS-MS-COL

text: No

text: Homo sapiens

text: male

text: Case Set

characteristic: study design


Blood of Canis lupus

text: Qufu Normal University

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

characteristic: SRA accession

text: Qufu Normal Universiy

text: adult

characteristic: isolate

text: Canis lupus

text: male

text: blood

characteristic: tissue

text: Blood of Canis lupus


text: A*STAR

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: MIGS.ba

characteristic: NCBI submission model

characteristic: culture-collection

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Streptomyces noursei

text: Rao KV. 3-[2-(5-acetoxy-2-hydroxy-3,5-dimethyl cyclohexyl)-2-hydroxyethyl] glutarimide and derivatives thereof. US Patent 3,095,418 dated Jun 25 1963

text: ATCC 12757

characteristic: strain

text: Cost-effective hybrid long-short read assembly delineates alternative GC-rich Streptomyces chassis for natural product discovery

characteristic: title

text: type strain of Streptomyces albulus

characteristic: type-material


text: A*STAR

text: live

text: MIGS.ba

characteristic: NCBI submission package

text: Keywords: GSC:MIxS;MIGS:6.0

text: ATCC 25470

characteristic: note

text: Streptomyces lydicus

characteristic: organism

text: Shirling EB, Gottlieb D. Cooperative description of type cultures of Streptomyces. IV. Species descriptions from the second, third and fourth studies. Int J Syst Bacteriol 19: 391-512, 1969.

text: NRRL ISP-5461

text: type strain of Streptomyces lydicus


ATCC 31713

characteristic: External Id

text: A*STAR

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: MIGS.ba

text: Keywords: GSC:MIxS;MIGS:6.0

text: Streptomyces noursei

text: Higashide, Eiji, and Satoshi Horii. Streptomyces albulus subsp. ochragerus subsp. nov. culture for making peptide. U.S. Patent No. 4,575,489. 11 Mar. 1986.

text: ATCC 31713


text: Lanzhou university

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: Mice

characteristic: host

text: fecal sample

text: feces metagenome

text: Metagenome or environmental sample from feces metagenome

characteristic: tmp


text: northeast agricultral university

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: China:heilongjiang

text: soil sample

text: 45.05 N 126.14 E

text: soil metagenome

text: replicate = biological replicate 1

characteristic: replicate

text: CK


text: northeast agricultral university

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

text: China:heilongjiang

text: soil sample

text: 45.05 N 126.15 E

text: soil metagenome

text: replicate = biological replicate 2

text: CK


text: northeast agricultral university

text: live

text: Metagenome or environmental

text: China:heilongjiang

text: soil sample

text: 45.05 N 126.16 E

text: soil metagenome

text: replicate = biological replicate 3

text: CK


text: northeast agricultral university

text: live

text: Metagenome or environmental

text: China:heilongjiang

text: soil sample

text: 45.05 N 126.17 E

text: soil metagenome

text: replicate = biological replicate 1


text: northeast agricultral university

text: live

text: Metagenome or environmental

text: China:heilongjiang

text: soil sample

text: 45.05 N 126.18 E

text: soil metagenome

text: replicate = biological replicate 2


text: northeast agricultral university

text: live

text: Metagenome or environmental

text: China:heilongjiang

text: soil sample

text: 45.05 N 126.19 E

text: soil metagenome

text: replicate = biological replicate 3


text: northeast agricultral university

text: live

text: Metagenome or environmental

text: China:heilongjiang

text: soil sample

text: 45.05 N 126.20 E

text: soil metagenome

text: replicate = biological replicate 1


text: northeast agricultral university

text: live

text: Metagenome or environmental

text: China:heilongjiang

text: soil sample

text: 45.05 N 126.21 E

text: soil metagenome

text: replicate = biological replicate 2


text: northeast agricultral university

text: live

text: Metagenome or environmental

text: China:heilongjiang

text: soil sample

text: 45.05 N 126.22 E

text: soil metagenome

text: replicate = biological replicate 3


text: northeast agricultral university

text: live

text: Metagenome or environmental

text: China:heilongjiang

text: soil sample

text: 45.05 N 126.23 E

text: soil metagenome

text: replicate = biological replicate 1


text: northeast agricultral university

text: live

text: Metagenome or environmental

text: China:heilongjiang

text: soil sample

text: 45.05 N 126.24 E

text: soil metagenome

text: replicate = biological replicate 2


text: northeast agricultral university

text: live

text: Metagenome or environmental

text: China:heilongjiang

text: soil sample

text: 45.05 N 126.25 E

text: soil metagenome

text: replicate = biological replicate 3


text: northeast agricultral university

text: live

text: Metagenome or environmental

text: China:heilongjiang

text: soil sample

text: 45.05 N 126.26 E

text: soil metagenome

text: replicate = biological replicate 1


text: northeast agricultral university

text: live

text: Metagenome or environmental

text: China:heilongjiang

text: soil sample

text: 45.05 N 126.27 E

text: soil metagenome

text: replicate = biological replicate 2


text: northeast agricultral university

text: live

text: Metagenome or environmental

text: China:heilongjiang

text: soil sample

text: 45.05 N 126.28 E

text: soil metagenome

text: replicate = biological replicate 3


text: northeast agricultral university

text: live

text: Metagenome or environmental

text: China:heilongjiang

text: soil sample

text: 45.05 N 126.29 E

text: soil metagenome

text: replicate = biological replicate 1


text: northeast agricultral university

text: live

text: Metagenome or environmental

text: China:heilongjiang

text: soil sample

text: 45.05 N 126.30 E

text: soil metagenome

text: replicate = biological replicate 2


text: northeast agricultral university

text: live

text: Metagenome or environmental

text: China:heilongjiang

text: soil sample

text: 45.05 N 126.31 E

text: soil metagenome

text: replicate = biological replicate 3


text: northeast agricultral university

text: live

text: Metagenome or environmental

text: China:heilongjiang

text: soil sample

text: 45.05 N 126.32 E

text: soil metagenome

text: replicate = biological replicate 1


text: northeast agricultral university

text: live

text: Metagenome or environmental

text: China:heilongjiang

text: soil sample

text: 45.05 N 126.33 E

text: soil metagenome

text: replicate = biological replicate 2


text: northeast agricultral university

text: live

text: Metagenome or environmental

text: China:heilongjiang

text: soil sample

text: 45.05 N 126.34 E

text: soil metagenome

text: replicate = biological replicate 3


text: northeast agricultral university

text: live

text: Metagenome or environmental

text: China:heilongjiang

text: soil sample

text: 45.05 N 126.35 E

text: soil metagenome

text: replicate = biological replicate 1


text: northeast agricultral university

text: live

text: Metagenome or environmental

text: China:heilongjiang

text: soil sample

text: 45.05 N 126.36 E

text: soil metagenome

text: replicate = biological replicate 2


text: northeast agricultral university

text: live

text: Metagenome or environmental

text: China:heilongjiang

text: soil sample

text: 45.05 N 126.37 E

text: soil metagenome

text: replicate = biological replicate 3


text: northeast agricultral university

text: live

text: Metagenome or environmental

text: China:heilongjiang

text: soil sample

text: 45.05 N 126.38 E

text: soil metagenome

text: replicate = biological replicate 1


text: northeast agricultral university

text: live

text: Metagenome or environmental

text: China:heilongjiang

text: soil sample

text: 45.05 N 126.39 E

text: soil metagenome

text: replicate = biological replicate 2


text: northeast agricultral university

text: live

text: Metagenome or environmental

text: China:heilongjiang

text: soil sample

text: 45.05 N 126.40 E

text: soil metagenome

text: replicate = biological replicate 3


text: northeast agricultral university

text: live

text: Metagenome or environmental

text: China:heilongjiang

text: soil sample

text: 45.05 N 126.41 E

text: soil metagenome

text: replicate = biological replicate 1


text: northeast agricultral university

text: live

text: Metagenome or environmental

text: China:heilongjiang

text: soil sample

text: 45.05 N 126.42 E

text: soil metagenome

text: replicate = biological replicate 2


text: northeast agricultral university

text: live

text: Metagenome or environmental

text: China:heilongjiang

text: soil sample

text: 45.05 N 126.43 E

text: soil metagenome

text: replicate = biological replicate 3


text: northeast agricultral university

text: live

text: Metagenome or environmental

text: China:heilongjiang

text: soil sample

text: 45.05 N 126.44 E

text: soil metagenome

text: replicate = biological replicate 1


text: northeast agricultral university

text: live

text: Metagenome or environmental

text: China:heilongjiang

text: soil sample

text: 45.05 N 126.45 E

text: soil metagenome

text: replicate = biological replicate 2


text: northeast agricultral university

text: live

text: Metagenome or environmental

text: China:heilongjiang

text: soil sample

text: 45.05 N 126.46 E

text: soil metagenome

text: replicate = biological replicate 3


text: Heinrich Heine Universitaet

text: live

text: Plant

text: 26 days

characteristic: age

characteristic: cultivar

text: Rep.1 of BZR1 B73xMo17

characteristic: description

text: young plant

text: B73 x Mo17

characteristic: ecotype

text: USA

text: Zea mays

text: BxM BZR1-YFP F1 Rep1

characteristic: replicates

text: meristem enriched / shoot

characteristic: tissue

text: Plant sample from Zea mays

text: 1uM 24-eBL

characteristic: treatment


characteristic: External Id

text: Heinrich Heine Universitaet

characteristic: INSDC center name

text: live

text: Plant

characteristic: NCBI submission package

text: 26 days

text: Rep.2 of BZR1 B73xMo17

text: young plant

text: B73 x Mo17

text: USA

text: Zea mays

characteristic: organism

text: BxM BZR1-YFP F1 Rep2

text: meristem enriched / shoot

text: Plant sample from Zea mays

characteristic: title

text: 1uM 24-eBL


text: Heinrich Heine Universitaet

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Plant

characteristic: SRA accession

text: 26 days

text: Rep.3 of BZR1 B73xMo17

text: young plant

text: B73 x Mo17

text: USA

text: Zea mays

text: BxM BZR1-YFP F1 Rep3

text: meristem enriched / shoot

text: Plant sample from Zea mays

text: 1uM 24-eBL


text: Heinrich Heine Universitaet

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Plant

text: 26 days

text: Rep.1 of BZR1Mo17x B73

text: young plant

text: Mo17x B73

text: USA

text: Zea mays

text: MxB BZR1-YFP F1 Rep1

text: meristem enriched / shoot

text: Plant sample from Zea mays

text: 1uM 24-eBL


text: Heinrich Heine Universitaet

text: live

text: Plant

characteristic: NCBI submission model

text: 26 days

characteristic: age

text: Rep.2 of BZR1Mo17x B73

text: young plant

text: Mo17x B73

text: USA

text: Zea mays

text: MxB BZR1-YFP F1 Rep2

text: meristem enriched / shoot

text: Plant sample from Zea mays

text: 1uM 24-eBL


text: Heinrich Heine Universitaet

text: live

text: Plant

text: 26 days

characteristic: cultivar

text: Rep.3 of BZR1Mo17x B73

characteristic: description

text: young plant

text: Mo17x B73

text: USA

text: Zea mays

text: MxB BZR1-YFP F1 Rep3

text: meristem enriched / shoot

text: Plant sample from Zea mays

text: 1uM 24-eBL


text: Heinrich Heine Universitaet

text: live

text: Plant

text: 26 days

text: Rep. 1 of INPUT BZR1 B73xMo17

text: young plant

text: B73 x Mo17

characteristic: ecotype

text: Germany

text: Zea mays

text: BxM Input Rep1

characteristic: replicates

text: meristem enriched / shoot

text: Plant sample from Zea mays

text: 1uM 24-eBL


text: Heinrich Heine Universitaet

text: live

text: Plant

text: 26 days

text: Rep. 2 of INPUT BZR1 B73xMo17

text: young plant

text: B73 x Mo17

text: Germany

text: Zea mays

text: BxM Input Rep2

text: meristem enriched / shoot

characteristic: tissue

text: Plant sample from Zea mays

text: 1uM 24-eBL

characteristic: treatment


characteristic: External Id

text: Heinrich Heine Universitaet

characteristic: INSDC center name

text: live

text: Plant

text: 26 days

text: Rep. 3 of INPUT BZR1 B73xMo17

text: young plant

text: B73 x Mo17

text: Germany

text: Zea mays

text: BxM Input Rep3

text: meristem enriched / shoot

text: Plant sample from Zea mays

text: 1uM 24-eBL


text: Heinrich Heine Universitaet

text: live

text: Plant

characteristic: NCBI submission package

text: 26 days

text: Rep. 1 of INPUT BZR1 Mo17xB73

text: young plant

text: Mo17x B73

text: Germany

text: Zea mays

characteristic: organism

text: MxB Input Rep1

text: meristem enriched / shoot

text: Plant sample from Zea mays

text: 1uM 24-eBL


text: Heinrich Heine Universitaet

characteristic: INSDC first public

text: live

text: Plant

text: 26 days

text: Rep. 2 of INPUT BZR1 Mo17xB73

text: young plant

text: Mo17x B73

text: Germany

text: Zea mays

text: MxB Input Rep2

text: meristem enriched / shoot

text: Plant sample from Zea mays

characteristic: title

text: 1uM 24-eBL


text: Heinrich Heine Universitaet

characteristic: INSDC secondary accession

text: live

text: Plant

characteristic: SRA accession

text: 26 days

text: Rep. 3 of INPUT BZR1 Mo17xB73

text: young plant

text: Mo17x B73

text: Germany

text: Zea mays

text: MxB Input Rep3

text: meristem enriched / shoot

text: Plant sample from Zea mays

text: 1uM 24-eBL


text: Heinrich Heine Universitaet

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Plant

text: 26 days

text: Additional deeper sequencing of Rep. 4 of INPUT BZR1 Mo17xB73

text: young plant

text: Mo17x B73

text: Germany

text: Zea mays

text: MxB Input BZR1-YFP Rep4

text: meristem enriched / shoot

text: Plant sample from Zea mays

text: 1uM 24-eBL


text: Heinrich Heine Universitaet

text: live

text: Plant

characteristic: NCBI submission model

text: 26 days

characteristic: age

text: Additional deeper sequencing of Rep. 5 of INPUT BZR1 Mo17xB73

text: young plant

text: Mo17x B73

text: Germany

text: Zea mays

text: MxB Input BZR1-YFP Rep5

text: meristem enriched / shoot

text: Plant sample from Zea mays

text: 1uM 24-eBL


text: Heinrich Heine Universitaet

text: live

text: Plant

text: 26 days

characteristic: cultivar

text: Additional deeper sequencing of Rep. 6 of INPUT BZR1 Mo17xB73

characteristic: description

text: young plant

text: Mo17x B73

text: Germany

text: Zea mays

text: MxB Input BZR1-YFP Rep6

text: meristem enriched / shoot

text: Plant sample from Zea mays

text: 1uM 24-eBL


text: Heinrich Heine Universitaet

text: live

text: Plant

text: 26 days

text: Negative CTRL (no-YFP Sibs of Rep1-3 combined) B73xMo17

text: young plant

text: B73 x Mo17

characteristic: ecotype

text: Germany

text: Zea mays

text: Neg. CTRL Non-YFP sibs

characteristic: replicates

text: meristem enriched / shoot

text: Plant sample from Zea mays

text: 1uM 24-eBL


text: Heinrich Heine Universitaet

text: live

text: Plant

text: 26 days

text: Mo17xB73_F1_eMethyl-seq Rep1

text: young plant

text: Mo17x B73

text: Germany

text: Zea mays

text: meristem enriched / shoot

characteristic: tissue

text: Plant sample from Zea mays

text: 1uM 24-eBL

characteristic: treatment


characteristic: External Id

text: Heinrich Heine Universitaet

characteristic: INSDC center name

text: live

text: Plant

text: 26 days

text: Mo17xB73_F1_eMethyl-seq Rep2

text: young plant

text: Mo17x B73

text: Germany

text: Zea mays

text: meristem enriched / shoot

text: Plant sample from Zea mays

text: 1uM 24-eBL


text: Heinrich Heine Universitaet

text: live

text: Plant

characteristic: NCBI submission package

text: 26 days

text: Mo17xB73_F1_eMethyl-seq Rep3

text: young plant

text: Mo17x B73

text: Germany

text: Zea mays

characteristic: organism

text: meristem enriched / shoot

text: Plant sample from Zea mays

text: 1uM 24-eBL


text: Heinrich Heine Universitaet

characteristic: INSDC first public

text: live

text: Plant

text: 26 days

text: young plant

text: USA

text: Zea mays

text: meristem enriched / shoot

text: Plant sample from Zea mays

characteristic: title

text: 1uM 24-eBL


text: Heinrich Heine Universitaet

characteristic: INSDC secondary accession

text: live

text: Plant

characteristic: SRA accession

text: 26 days

text: brd1 mutant

text: brd1 Mutant + 24-eBL for 4h mRNA_rep1

text: young plant

text: USA

text: Zea mays

text: meristem enriched / shoot

text: Plant sample from Zea mays

text: 1uM 24-eBL


text: Heinrich Heine Universitaet

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Plant

text: 26 days

text: brd1 mutant

text: brd1 Mutant + 24-eBL for 4h mRNA_rep2

text: young plant

text: USA

text: Zea mays

text: meristem enriched / shoot

text: Plant sample from Zea mays

text: 1uM 24-eBL


text: Heinrich Heine Universitaet

text: live

text: Plant

characteristic: NCBI submission model

text: 26 days

characteristic: age

text: brd1 mutant

text: brd1 Mutant + 24-eBL for 4h mRNA_rep3

text: young plant

text: USA

text: Zea mays

text: meristem enriched / shoot

text: Plant sample from Zea mays

text: 1uM 24-eBL


text: Heinrich Heine Universitaet

text: live

text: Plant

text: 26 days

text: brd1 mutant

characteristic: cultivar

text: brd1 Mutant + Mock for 4h mRNA_rep1

characteristic: description

text: young plant

text: USA

text: Zea mays

text: meristem enriched / shoot

text: Plant sample from Zea mays

text: Mock


text: Heinrich Heine Universitaet

text: live

text: Plant

text: 26 days

text: brd1 mutant

text: brd1 Mutant + Mock for 4h mRNA_rep2

text: young plant

characteristic: ecotype

text: USA

text: Zea mays

characteristic: replicates

text: meristem enriched / shoot

text: Plant sample from Zea mays

text: Mock


text: Heinrich Heine Universitaet

text: live

text: Plant

text: 26 days

text: brd1 mutant

text: brd1 Mutant + Mock for 4h mRNA_rep3

text: young plant

text: USA

text: Zea mays

text: meristem enriched / shoot

characteristic: tissue

text: Plant sample from Zea mays

text: Mock

characteristic: treatment


characteristic: External Id

text: Heinrich Heine Universitaet

characteristic: INSDC center name

text: live

text: Plant

text: 21 days

text: young plant

text: Germany

text: Zea mays

text: V5 leaf

text: Plant sample from Zea mays


text: Technische Universitat Darmstadt

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.host-associated

characteristic: NCBI submission package

text: Keywords: GSC:MIxS;MIMS:6.0

text: not provided

text: not provided

text: not provided

text: Ecuador: Esmeraldas

text: MinMammal-U-

text: Dung Beetle Digestive Track

text: 0.52 N 79.20 W

text: insect gut metagenome

characteristic: organism

text: 1 Digestive Track

text: MIMS Environmental/Metagenome sample from insect gut metagenome


text: Technische Universitat Darmstadt

characteristic: INSDC first public

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.host-associated

text: Keywords: GSC:MIxS;MIMS:6.0

text: not provided

text: not provided

text: not provided

text: Ecuador: Esmeraldas

text: Canthon angustatus

characteristic: host

text: MinMammal-U-

text: Dung Beetle Digestive Track

text: 0.52 N 79.20 W

text: insect gut metagenome

text: 1 Digestive Track

characteristic: title


text: Technische Universitat Darmstadt

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.host-associated

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIMS:6.0

text: not provided

text: not provided

text: not provided

text: Ecuador: Esmeraldas

text: Oxysternon conspicillatum

text: MinMammal-U-

text: Dung Beetle Digestive Track

text: 0.52 N 79.20 W

text: insect gut metagenome

text: 1 Digestive Track


text: Technische Universitat Darmstadt

text: live

characteristic: INSDC status

text: MIMS.me

characteristic: NCBI submission model

text: MIGS/MIMS/MIMARKS.host-associated

text: Keywords: GSC:MIxS;MIMS:6.0

text: not provided

text: not provided

text: not provided

text: Ecuador: Esmeraldas

text: Dichiotomius sp.

text: MinMammal-U-

text: Dung Beetle Digestive Track

text: 0.52 N 79.20 W

text: insect gut metagenome

text: 1 Digestive Track


text: Technische Universitat Darmstadt

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.host-associated

text: Keywords: GSC:MIxS;MIMS:6.0

characteristic: description

text: not provided

text: not provided

text: not provided

text: Germany: Hessen

text: Anoplotrupes stercorosus

text: MinMammal-U-

text: Dung Beetle Digestive Track

text: 49.87 N 8.67 E

text: insect gut metagenome

text: 1 Digestive Track


text: Technische Universitat Darmstadt

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.host-associated

text: Keywords: GSC:MIxS;MIMS:6.0

text: not provided

text: not provided

text: not provided

text: Germany: Hessen

text: Aphodius sticticus

text: MinMammal-U-

text: Dung Beetle Digestive Track

text: 49.87 N 8.67 E

text: insect gut metagenome

text: 1 Digestive Track


text: Technische Universitat Darmstadt

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.host-associated

text: Keywords: GSC:MIxS;MIMS:6.0

text: not provided

text: not provided

text: not provided

text: Ecuador: Esmeraldas

text: Canthidium sp.

text: MinMammal-U-

text: Dung Beetle Digestive Track

text: 0.52 N 79.20 W

text: insect gut metagenome

text: 1 Digestive Track


text: Technische Universitat Darmstadt

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.host-associated

text: Keywords: GSC:MIxS;MIMS:6.0

text: not provided

text: not provided

text: not provided

text: Ecuador: Esmeraldas

text: Deltochilum sp.

text: MinMammal-U-

text: Dung Beetle Digestive Track

text: 0.52 N 79.20 W

text: insect gut metagenome

text: 1 Digestive Track


text: Technische Universitat Darmstadt

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.host-associated

text: Keywords: GSC:MIxS;MIMS:6.0

text: not provided

text: not provided

text: not provided

text: Ecuador: Esmeraldas

text: Canthon angustatus

text: Dung Beetle Digestive Track

text: 0.52 N 79.20 W

text: insect gut metagenome

text: 1 Digestive Track


text: Technische Universitat Darmstadt

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.host-associated

text: Keywords: GSC:MIxS;MIMS:6.0

text: not provided

text: not provided

text: not provided

text: Ecuador: Esmeraldas

text: Deltochilum sp.

text: Dung Beetle Digestive Track

text: 0.52 N 79.20 W

text: insect gut metagenome

text: 1 Digestive Track


text: Technische Universitat Darmstadt

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.host-associated

text: Keywords: GSC:MIxS;MIMS:6.0

text: not provided

text: not provided

text: not provided

text: Ecuador: Esmeraldas

text: Onthophagus sp.

text: MinMammal-U-

text: Dung Beetle Digestive Track

text: 0.52 N 79.20 W

text: insect gut metagenome

text: 1 Digestive Track


text: Technische Universitat Darmstadt

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.host-associated

text: Keywords: GSC:MIxS;MIMS:6.0

text: not provided

text: not provided

text: not provided

text: Ecuador: Esmeraldas

text: Oxysternon conspicillatum

text: Dung Beetle Digestive Track

text: 0.52 N 79.20 W

text: insect gut metagenome

text: 1 Digestive Track


text: Technische Universitat Darmstadt

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.host-associated

text: Keywords: GSC:MIxS;MIMS:6.0

text: not provided

text: not provided

text: not provided

text: Ecuador: Esmeraldas

text: Scybalocanthon trimaculatus

text: MinMammal-U-

text: Dung Beetle Digestive Track

text: 0.52 N 79.20 W

text: insect gut metagenome

text: 1 Digestive Track


text: Technische Universitat Darmstadt

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.host-associated

text: Keywords: GSC:MIxS;MIMS:6.0

text: not provided

text: not provided

text: not provided

text: Ecuador: Esmeraldas

text: Scybalocanthon trimaculatus

text: Dung Beetle Digestive Track

text: 0.52 N 79.20 W

text: insect gut metagenome

text: 1 Digestive Track


text: Technische Universitat Darmstadt

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.host-associated

text: Keywords: GSC:MIxS;MIMS:6.0

text: not provided

text: not provided

text: not provided

text: Ecuador: Esmeraldas

text: Onthophagus sp.

text: Dung Beetle Digestive Track

text: 0.52 N 79.20 W

text: insect gut metagenome

text: 1 Digestive Track


text: Technische Universitat Darmstadt

text: live

text: MIMS.me

text: MIGS/MIMS/MIMARKS.host-associated

text: Keywords: GSC:MIxS;MIMS:6.0

text: not provided

text: not provided

text: not provided

text: Germany: Hessen

text: Anoplotrupes stercorosus

text: Dung Beetle Digestive Track

text: 49.87 N 8.67 E

text: insect gut metagenome

text: 1 Digestive Track


text: NJAU

text: live

text: Metagenome or environmental

text: broiler

characteristic: information

text: lung metagenome


text: University of Birmingham

text: live

text: Microbe, viral or environmental

text: China: Guangzhou

text: human clinical specimen

text: Escherichia coli

text: whole organism

characteristic: strain

text: Microbe sample from Escherichia coli


text: University of Birmingham

text: live

text: Microbe, viral or environmental

text: China: Guangzhou

text: sink drain

text: Escherichia coli

text: whole organism

text: Microbe sample from Escherichia coli


text: University of Birmingham

text: live

text: Microbe, viral or environmental

text: China: Guangzhou

text: bed curtain

text: Escherichia coli

text: whole organism

text: Microbe sample from Escherichia coli


text: University of Birmingham

text: live

text: Microbe, viral or environmental

text: China: Guangzhou

text: button

text: Escherichia coli

text: whole organism

text: Microbe sample from Escherichia coli


text: University of Birmingham

text: live

text: Microbe, viral or environmental

text: China: Guangzhou

text: sink countertop

text: Escherichia coli

text: whole organism

text: Microbe sample from Escherichia coli


text: University of Birmingham

text: live

text: Microbe, viral or environmental

text: China: Guangzhou

text: ICU patient rectal swab

text: Escherichia coli

text: whole organism

text: Microbe sample from Escherichia coli


text: University of Birmingham

text: live

text: Microbe, viral or environmental

text: China: Guangzhou

text: ICU patient oral swab

text: Escherichia coli

text: whole organism

text: Microbe sample from Escherichia coli


text: University of Birmingham

text: live

text: Microbe, viral or environmental

text: China: Guangzhou

text: ICU staff rectal swab

text: Escherichia coli

text: whole organism

text: Microbe sample from Escherichia coli


text: Northwestern University

text: live

text: Generic

characteristic: cell line

text: bone cancer

characteristic: cell type

characteristic: genotype

text: Homo sapiens

text: cancer cell line

text: cancer cell line

characteristic: tissue

text: siNT


characteristic: External Id

text: Northwestern University

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission package

text: bone cancer

text: Homo sapiens

text: cancer cell line

text: cancer cell line

characteristic: treatment


text: Northwestern University

characteristic: INSDC first public

text: live

text: Generic

text: bone cancer

text: WT

text: Homo sapiens

characteristic: organism

text: cancer cell line

text: cancer cell line

characteristic: title

text: siNT


text: Northwestern University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: SRA accession

text: bone cancer

text: WT

text: Homo sapiens

text: cancer cell line

text: cancer cell line


text: Northwestern University

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: lung cancer

text: WT

text: Homo sapiens

text: cancer cell line

text: cancer cell line

text: siNT+siNT


text: Northwestern University

text: live

text: Generic

text: lung cancer

text: WT

text: Homo sapiens

text: cancer cell line

text: cancer cell line


text: Guangdong Academy of Sciences

text: live

text: Metagenome or environmental

text: France:Assat

text: wastewater

text: 43.25 N 0.29 W

text: wastewater metagenome

text: Metagenome or environmental sample from wastewater metagenome


text: Guangdong Academy of Sciences

text: live

text: Metagenome or environmental

text: France:Ibos

text: wastewater

text: 43.23 N 0.002 E

text: wastewater metagenome


text: Guangdong Academy of Sciences

text: live

text: Metagenome or environmental

text: France:Bayonne

text: wastewater

text: 43.48 N 1.47 W

text: wastewater metagenome


text: DC Immunobiology, Immunotechnology, Lund University

text: live

text: Generic

text: male

characteristic: Sex

text: Myeloid antigen presenting cells

text: Homo sapiens

characteristic: patient number

text: Paired healthy tonsil

text: Paired healthy tonsil

text: Patient 5, healthy, scRNAseq

text: Healthy

characteristic: tumor stage


text: live

text: Generic

text: male

text: Myeloid antigen presenting cells

characteristic: cell type

text: Homo sapiens

text: Tonsillar cancer

text: Tonsillar cancer

text: Patient 5, cancer, scRNAseq

text: II


text: live

text: Generic

text: male

text: Myeloid antigen presenting cells

text: Homo sapiens

text: Tonsillar cancer

text: Tonsillar cancer

characteristic: tissue

text: Patient 4, cancer, scRNAseq

text: II


characteristic: External Id

text: live

text: Generic

text: male

text: Myeloid antigen presenting cells

text: Homo sapiens

text: Tonsillar cancer

text: Tonsillar cancer

text: Patient 3, cancer, scRNAseq

text: II


characteristic: INSDC center name

text: live

text: Generic

text: male

text: Myeloid antigen presenting cells

text: Homo sapiens

text: Tonsillar cancer

text: Tonsillar cancer

text: Patient 2, cancer, scRNAseq

text: I


text: live

text: Generic

characteristic: NCBI submission package

text: female

text: Myeloid antigen presenting cells

text: Homo sapiens

text: Tonsillar cancer

text: Tonsillar cancer

text: Patient 1, cancer, scRNAseq

text: I


text: Huazhong Agricultural University

text: live

text: Plant

text: Nipponbare

characteristic: cultivar

text: 1-week-old plants

text: Japan

text: replicate 1

text: Oryza sativa Japonica Group

characteristic: replicate

text: root tips

text: Plant sample from Oryza sativa Japonica Group


text: Huazhong Agricultural University

characteristic: INSDC first public

text: live

text: Plant

text: Nipponbare

text: 1-week-old plants

text: Japan

text: replicate 2

text: Oryza sativa Japonica Group

characteristic: organism

text: root tips


text: Huazhong Agricultural University

characteristic: INSDC last update

text: live

text: Plant

text: Zhonghua 11

text: 1-week-old plants

text: China

text: replicate 1

text: Oryza sativa Japonica Group

text: root tips

characteristic: title


text: Huazhong Agricultural University

characteristic: INSDC secondary accession

text: live

text: Plant

characteristic: SRA accession

text: Zhonghua 11

text: 1-week-old plants

text: China

text: replicate 2

text: Oryza sativa Japonica Group

text: root tips


text: Huazhong Agricultural University

text: live

characteristic: INSDC status

text: Plant

characteristic: NCBI submission model

text: HKG 98

text: 1-week-old plants

text: Mali

text: replicate 1

text: Oryza sativa

text: root tips

text: Plant sample from Oryza sativa


text: Huazhong Agricultural University

text: live

text: Plant

text: HKG 98

text: 1-week-old plants

text: Mali

text: replicate 2

text: Oryza sativa

text: root tips

text: Plant sample from Oryza sativa


text: China Agricultural University

text: live

text: Plant

text: China:Beijing

characteristic: isolate

text: Zea mays

text: leaf

text: Plant sample from Zea mays


hitom-mix.tar.gz

text: China Agricultural University

text: live

text: Plant

text: China:Beijing

text: hitom-mix

text: Zea mays

text: leaf

text: Plant sample from Zea mays


text: The Bone Biology and Disease Laboratory, School of Biomedical Sciences, The University of Western Australia

text: live

text: Generic

text: Bone marrow macrophage-derived osteoclasts

text: WT

characteristic: genotype

text: Mus musculus

text: bone

text: bone

text: Osteoclasts, Slc37a2 WT, biol rep 3

text: M-CSF/RANKL-stimulation (5-days)

characteristic: treatment


text: live

text: Generic

characteristic: cell type

text: WT

text: Mus musculus

text: bone

text: bone

characteristic: tissue

text: Osteoclasts, Slc37a2 WT, biol rep 2

text: M-CSF/RANKL-stimulation (5-days)


characteristic: External Id

characteristic: INSDC center name

text: live

text: Generic

text: WT

text: Mus musculus

text: bone

text: bone

text: Osteoclasts, Slc37a2 WT, biol rep 1

text: M-CSF/RANKL-stimulation (5-days)


text: live

text: Generic

characteristic: NCBI submission package

text: Slc37a2 KO

text: Mus musculus

text: bone

text: bone

text: Osteoclasts, Slc37a2 KO, biol rep 3

text: M-CSF/RANKL-stimulation (5-days)


text: live

text: Generic

text: Slc37a2 KO

text: Mus musculus

text: bone

text: bone

text: Osteoclasts, Slc37a2 KO, biol rep 2

text: M-CSF/RANKL-stimulation (5-days)


text: live

text: Generic

text: Slc37a2 KO

text: Mus musculus

text: bone

text: bone

text: Osteoclasts, Slc37a2 KO, biol rep 1

text: M-CSF/RANKL-stimulation (5-days)


text: Fundacion MEDINA

text: live

text: MIGS.ba

text: MIGS/MIMS/MIMARKS.plant-associated

text: Keywords: GSC:MIxS;MIGS:6.0

characteristic: description

text: Spain: Saladar de El Margen, Cullar-Baza, Granada

text: 37.647564 N 2.603196 W

text: Kribbella sp. CA-293567

characteristic: strain

text: MIGS Cultured Bacterial/Archaeal sample from Kribbella sp. CA-293567


text: Chungnam National University

characteristic: INSDC first public

text: live

text: Generic

text: exosome

text: WT

text: small RNA

characteristic: molecule type

text: Gallus gallus

characteristic: organism

text: Egg yolk

text: Egg yolk

text: Egg yolk vesicles sample 3


text: Chungnam National University

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: exosome

text: WT

text: small RNA

text: Gallus gallus

text: Egg yolk

text: Egg yolk

text: Egg yolk vesicles sample 2

characteristic: title


text: Chungnam National University

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: exosome

text: WT

text: small RNA

text: Gallus gallus

text: Egg yolk

text: Egg yolk

text: Egg yolk vesicles sample 1


text: Murdoch Children's Research Institute

text: live

text: Generic

characteristic: cell line

text: WT

characteristic: genotype

text: Homo sapiens

text: iPSC-derived osteogenic organoid

text: iPSC-derived osteogenic organoid

text: osteogenic differentiation D73

characteristic: treatment


characteristic: External Id

text: Murdoch Children's Research Institute

text: live

text: Generic

text: WT

text: Homo sapiens

text: iPSC-derived cartilage

text: iPSC-derived cartilage

characteristic: tissue

text: chondrogenic differentiation D52


text: Murdoch Children's Research Institute

characteristic: INSDC center name

text: live

text: Generic

characteristic: NCBI submission package

text: WT

text: Homo sapiens

text: iPSC-derived osteogenic organoid

text: iPSC-derived osteogenic organoid

text: osteogenic differentiation D72


text: Murdoch Children's Research Institute

text: live

text: Generic

text: WT

text: Homo sapiens

text: iPSC-derived cartilage

text: iPSC-derived cartilage

text: chondrogenic differentiation D51


text: Murdoch Children's Research Institute

text: live

text: Generic

text: WT

text: Homo sapiens

text: iPSC-derived cartilage

text: iPSC-derived cartilage

text: chondrogenic differentiation D48 treated with TGFb from D13


text: Murdoch Children's Research Institute

text: live

text: Generic

text: WT

text: Homo sapiens

text: iPSC-derived cartilage

text: iPSC-derived cartilage

text: chondrogenic differentiation D48


text: Murdoch Children's Research Institute

text: live

text: Generic

text: WT

text: Homo sapiens

text: iPSC-derived cartilage

text: iPSC-derived cartilage

text: chondrogenic differentiation D69 treated with T3 from D48-D69


text: Murdoch Children's Research Institute

text: live

text: Generic

text: WT

text: Homo sapiens

text: iPSC-derived cartilage

text: iPSC-derived cartilage

text: chondrogenic differentiation D69


text: Health Canada

text: live

text: Pathogen.cl

text: Canadian Blood Services

text: Cutibacterium acnes strain CBS-BPNBT19269 isolated from contaminated human red blood cell concentrates (Canadian Blood Services); isolate cultured and sequenced at Health Canada (Bureau of Microbial Hazards)

characteristic: description

text: Canada

text: Homo sapiens

characteristic: host

text: Healthy

text: male

text: Blood (Red blood cell concentrates)

text: Isolated from red blood cell concentrate associated with contaminated platelet concentrate

text: Not collected

text: Cutibacterium acnes

characteristic: strain

text: Pathogen: clinical or host-associated sample from Cutibacterium acnes


text: Health Canada

characteristic: INSDC first public

text: live

text: Pathogen.cl

text: Canadian Blood Services

text: Cutibacterium acnes strain CBS-BPNBT19195 isolated from contaminated human platelets (Canadian Blood Services); isolate cultured and sequenced at Health Canada (Bureau of Microbial Hazards)

text: Canada

text: Homo sapiens

text: Healthy

text: male

text: Blood (Platelet concentrates)

text: Isolated from contaminated platelet concentrates

text: Not collected

text: Cutibacterium acnes

characteristic: organism


text: Health Canada

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

text: Canadian Blood Services

text: Cutibacterium acnes strain CBS-BPNBT19329 isolated from contaminated human platelets (Canadian Blood Services); isolate cultured and sequenced at Health Canada (Bureau of Microbial Hazards)

text: Canada

text: Homo sapiens

text: Healthy

text: male

text: Blood (Platelet concentrates)

text: Not collected

text: Cutibacterium acnes


text: Health Canada

text: live

characteristic: INSDC status

text: Pathogen.cl

text: Canadian Blood Services

text: Cutibacterium acnes strain CBS-BPNBT19223 isolated from contaminated human platelets (Canadian Blood Services); isolate cultured and sequenced at Health Canada (Bureau of Microbial Hazards)

text: Canada

text: Homo sapiens

text: Healthy

text: male

text: Blood (Platelet concentrates)

text: Not collected

text: Cutibacterium acnes

characteristic: title


text: Health Canada

text: live

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: SRA accession

text: Canadian Blood Services

text: Cutibacterium acnes strain CBS-BPNBT19227 isolated from contaminated human platelets (Canadian Blood Services); isolate cultured and sequenced at Health Canada (Bureau of Microbial Hazards)

text: Canada

text: Homo sapiens

text: Healthy

text: male

text: Blood (Platelet concentrates)

text: Not collected

text: Cutibacterium acnes


text: Health Canada

text: live

text: Pathogen.cl

text: Canadian Blood Services

text: Cutibacterium acnes strain CBS-BPNBT19153 isolated from contaminated human platelets (Canadian Blood Services); isolate cultured and sequenced at Health Canada (Bureau of Microbial Hazards)

text: Canada

text: Homo sapiens

text: Healthy

text: Blood (Platelet concentrates)

text: Not collected

text: Cutibacterium acnes


text: Northwestern University Feinberg School of Medicine

text: live

text: Generic

text: HCT116 Drosha CD95 d.k.o. clone #12

characteristic: cell line

text: Homo sapiens

text: Korean Collection for Type Cultures (KCTC) and edited by Synthego

text: Cells were transduced with pLenti -CD95L SIL

characteristic: treatment/infection


characteristic: External Id

text: live

text: Generic

text: HCT116 Drosha CD95 d.k.o. clone #12

text: Homo sapiens

text: Cells were transduced with pLenti -CD95L zero


text: live

text: Generic

text: HCT116 Drosha CD95 d.k.o. clone #12

text: Homo sapiens

text: Cells were transduced with pLenti -CD95L NP


text: live

text: Generic

text: HCT116 Drosha CD95 d.k.o. clone #12

text: Homo sapiens

text: Cells were transduced with pLenti -CD95L wild-type


text: live

text: Generic

text: HCT116 Drosha CD95 d.k.o. clone #12

text: Homo sapiens

text: Cells were transduced with pLenti empty vector


text: live

text: Generic

text: HCT116 Ago 1/2/3 k.o.

text: Homo sapiens

text: David Corey (UT Southwestern) PMID: 32501500


text: live

text: Generic

text: HCT116 Ago 1/2/3 k.o.

text: Homo sapiens


text: live

text: Generic

text: HCT116 Drosha k.o. clone #40

text: Homo sapiens

text: Korean Collection for Type Cultures


text: live

text: Generic

text: HCT116 Drosha k.o. clone #40

text: Homo sapiens

text: Korean Collection for Type Cultures


text: live

text: Generic

text: HCT116 wild-type

text: Homo sapiens

text: Korean Collection for Type Cultures


text: live

text: Generic

text: HCT116 wild-type

text: Homo sapiens

text: Korean Collection for Type Cultures


text: live

text: Generic

text: HCT116 Dicer k.o. clone #43

text: Homo sapiens

text: Korean Collection for Type Cultures


text: live

text: Generic

text: HCT116 Drosha CD95 d.k.o. clone #12

text: Homo sapiens

text: Cells were transduced with pLenti -CD95L GUA


text: Norwegian University of Life Sciences

text: live

text: Metagenome or environmental

text: tricanine methanesulfonate (MS-222)

text: Distal intestine digesta of Atlantic salmon smolts fed a diet containining 0mg HKL137

text: marine biome[ENVO: 00000447)

text: animal-associated habitat[ENVO:00006776]

text: Norway:Aas

text: Salmo salar

text: distal intestine

text: intestinal content

text: CD

text: pre-smolt

text: 59.66 N 10.79 E

text: gut metagenome

text: 2 mL cryotube

text: liquid nitrogen

text: 200 mg

text: -80 Celsius

characteristic: tank

text: Metagenome or environmental sample from gut metagenome


text: Norwegian University of Life Sciences

characteristic: INSDC center name

text: live

text: Metagenome or environmental

text: tricanine methanesulfonate (MS-222)

text: Distal intestine digesta of Atlantic salmon smolts fed a diet containining 20mg HKL137

text: marine biome[ENVO: 00000447)

text: Norway:Aas

text: Salmo salar

text: distal intestine

text: intestinal content

text: pre-smolt

text: 59.66 N 10.79 E

text: gut metagenome

text: 2 mL cryotube

text: liquid nitrogen

text: 200 mg

text: -80 Celsius


text: Norwegian University of Life Sciences

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: tricanine methanesulfonate (MS-222)

text: Distal intestine digesta of Atlantic salmon smolts fed a diet containining 2g Macrogard

text: marine biome[ENVO: 00000447)

text: Norway:Aas

text: Salmo salar

text: distal intestine

text: intestinal content

text: MG

text: pre-smolt

text: 59.66 N 10.79 E

text: gut metagenome

text: 2 mL cryotube

text: liquid nitrogen

text: 200 mg

text: -80 Celsius


text: Norwegian University of Life Sciences

text: live

text: Metagenome or environmental

text: tricanine methanesulfonate (MS-222)

text: Distal intestine digesta of Atlantic salmon smolts fed a diet containining 500mg HKL137

characteristic: description

text: marine biome[ENVO: 00000447)

text: Norway:Aas

text: Salmo salar

text: distal intestine

text: intestinal content

text: pre-smolt

text: 59.66 N 10.79 E

text: gut metagenome

text: 2 mL cryotube

text: liquid nitrogen

text: 200 mg

text: -80 Celsius


text: Norwegian University of Life Sciences

text: live

text: Metagenome or environmental

text: tricanine methanesulfonate (MS-222)

text: Distal intestine digesta of Atlantic salmon smolts fed a diet containining 100mg HKL137

text: marine biome[ENVO: 00000447)

text: Norway:Aas

text: Salmo salar

characteristic: host

text: distal intestine

text: intestinal content

text: pre-smolt

text: 59.66 N 10.79 E

text: gut metagenome

text: 2 mL cryotube

text: liquid nitrogen

text: 200 mg

text: -80 Celsius


text: Norwegian University of Life Sciences

text: live

text: Metagenome or environmental

text: Atlantic salmon feed containing 0mg HKL137

text: Norway:Aas

text: 59.66 N 10.79 E

text: food metagenome

text: 100 mg

text: -80 Celsius

text: Metagenome or environmental sample from food metagenome


text: Norwegian University of Life Sciences

text: live

text: Metagenome or environmental

text: Atlantic salmon feed containing 20mg HKL137

text: Norway:Aas

text: 59.66 N 10.79 E

text: food metagenome

text: 100 mg

text: -80 Celsius


text: Norwegian University of Life Sciences

text: live

text: Metagenome or environmental

text: Atlantic salmon feed containing 100mg HKL137

text: Norway:Aas

text: 59.66 N 10.79 E

text: food metagenome

text: 100 mg

text: -80 Celsius


text: Norwegian University of Life Sciences

text: live

text: Metagenome or environmental

text: Atlantic salmon feed containing 5000mg HKL137

text: Norway:Aas

text: 59.66 N 10.79 E

text: food metagenome

text: 100 mg

text: -80 Celsius


text: Norwegian University of Life Sciences

text: live

text: Metagenome or environmental

text: Atlantic salmon feed containing 2g Macrogard

text: Norway:Aas

text: 59.66 N 10.79 E

text: food metagenome

text: 100 mg

text: -80 Celsius


text: Norwegian University of Life Sciences

text: live

text: Metagenome or environmental

text: Water collected from the fish tank 4

text: marine biome[ENVO: 00000447)

text: Estuarine biome[ENVO:01000020]

text: liquid water[ENVO:00002006]

text: Norway:Aas

text: 59.66 N 10.79 E

text: freshwater metagenome

text: 500 mL

text: -80 Celsius

text: Metagenome or environmental sample from freshwater metagenome


text: Norwegian University of Life Sciences

text: live

text: Metagenome or environmental

text: Water collected from the fish tank 14

text: marine biome[ENVO: 00000447)

text: Estuarine biome[ENVO:01000020]

text: liquid water[ENVO:00002006]

text: Norway:Aas

text: 59.66 N 10.79 E

text: freshwater metagenome

text: 500 mL

text: -80 Celsius


text: Norwegian University of Life Sciences

text: live

text: Metagenome or environmental

text: Water collected from the fish tank 5

text: marine biome[ENVO: 00000447)

text: Estuarine biome[ENVO:01000020]

text: liquid water[ENVO:00002006]

text: Norway:Aas

text: 59.66 N 10.79 E

text: freshwater metagenome

text: 500 mL

text: -80 Celsius


text: Norwegian University of Life Sciences

text: live

text: Metagenome or environmental

text: Water collected from the fish tank 15

text: marine biome[ENVO: 00000447)

text: Estuarine biome[ENVO:01000020]

text: liquid water[ENVO:00002006]

text: Norway:Aas

text: 59.66 N 10.79 E

text: freshwater metagenome

text: 500 mL

text: -80 Celsius


text: Norwegian University of Life Sciences

text: live

text: Metagenome or environmental

text: Water collected from the fish tank 6

text: marine biome[ENVO: 00000447)

text: Estuarine biome[ENVO:01000020]

text: liquid water[ENVO:00002006]

text: Norway:Aas

text: 59.66 N 10.79 E

text: freshwater metagenome

text: 500 mL

text: -80 Celsius


text: Norwegian University of Life Sciences

text: live

text: Metagenome or environmental

text: Water collected from the fish tank 16

text: marine biome[ENVO: 00000447)

text: Estuarine biome[ENVO:01000020]

text: liquid water[ENVO:00002006]

text: Norway:Aas

text: 59.66 N 10.79 E

text: freshwater metagenome

text: 500 mL

text: -80 Celsius


text: Norwegian University of Life Sciences

text: live

text: Metagenome or environmental

text: Water collected from the fish tank 7

text: marine biome[ENVO: 00000447)

text: Estuarine biome[ENVO:01000020]

text: liquid water[ENVO:00002006]

text: Norway:Aas

text: 59.66 N 10.79 E

text: freshwater metagenome

text: 500 mL

text: -80 Celsius


text: Norwegian University of Life Sciences

text: live

text: Metagenome or environmental

text: Water collected from the fish tank 17

text: marine biome[ENVO: 00000447)

text: Estuarine biome[ENVO:01000020]

text: liquid water[ENVO:00002006]

text: Norway:Aas

text: 59.66 N 10.79 E

text: freshwater metagenome

text: 500 mL

text: -80 Celsius


text: Norwegian University of Life Sciences

text: live

text: Metagenome or environmental

text: Water collected from the fish tank 8

text: marine biome[ENVO: 00000447)

text: Estuarine biome[ENVO:01000020]

text: liquid water[ENVO:00002006]

text: Norway:Aas

text: 59.66 N 10.79 E

text: freshwater metagenome

text: 500 mL

text: -80 Celsius


text: Norwegian University of Life Sciences

text: live

text: Metagenome or environmental

text: Water collected from the fish tank 18

text: marine biome[ENVO: 00000447)

text: Estuarine biome[ENVO:01000020]

text: liquid water[ENVO:00002006]

text: Norway:Aas

text: 59.66 N 10.79 E

text: freshwater metagenome

text: 500 mL

text: -80 Celsius


text: Norwegian University of Life Sciences

text: live

text: Metagenome or environmental

text: Water collected from the fish tank 9

text: marine biome[ENVO: 00000447)

text: Estuarine biome[ENVO:01000020]

text: liquid water[ENVO:00002006]

text: Norway:Aas

text: 59.66 N 10.79 E

text: freshwater metagenome

text: 500 mL

text: -80 Celsius


text: Norwegian University of Life Sciences

text: live

text: Metagenome or environmental

text: Water collected from the fish tank 2

text: marine biome[ENVO: 00000447)

text: Estuarine biome[ENVO:01000020]

text: liquid water[ENVO:00002006]

text: Norway:Aas

text: 59.66 N 10.79 E

text: freshwater metagenome

text: 500 mL

text: -80 Celsius


text: Norwegian University of Life Sciences

text: live

text: Metagenome or environmental

text: Water collected from the fish tank 10

text: marine biome[ENVO: 00000447)

text: Estuarine biome[ENVO:01000020]

text: liquid water[ENVO:00002006]

text: Norway:Aas

text: 59.66 N 10.79 E

text: freshwater metagenome

text: 500 mL

text: -80 Celsius


text: Norwegian University of Life Sciences

text: live

text: Metagenome or environmental

text: Water collected from the fish tank 3

text: marine biome[ENVO: 00000447)

text: Estuarine biome[ENVO:01000020]

text: liquid water[ENVO:00002006]

text: Norway:Aas

text: 59.66 N 10.79 E

text: freshwater metagenome

text: 500 mL

text: -80 Celsius


text: Norwegian University of Life Sciences

text: live

text: Metagenome or environmental

text: Water collected from the fish tank 13

text: marine biome[ENVO: 00000447)

text: Estuarine biome[ENVO:01000020]

text: liquid water[ENVO:00002006]

text: Norway:Aas

text: 59.66 N 10.79 E

text: freshwater metagenome

text: 500 mL

text: -80 Celsius


text: Norwegian University of Life Sciences

text: live

text: Metagenome or environmental

text: DNA sequencing blank

text: Norway:Aas

text: metagenome

text: Metagenome or environmental sample from metagenome


text: Norwegian University of Life Sciences

text: live

text: Metagenome or environmental

text: Filter paper used for the water extraction_used as blank

text: Norway:Aas

text: metagenome


text: Norwegian University of Life Sciences

text: live

text: Metagenome or environmental

text: Mock positive control

text: Norway:Aas

text: metagenome


text: Norwegian University of Life Sciences

text: live

text: Metagenome or environmental

text: DNA extraction blank

text: Norway:Aas

text: metagenome


text: Norwegian University of Life Sciences

text: live

text: Metagenome or environmental

text: DNA amplification blank

text: Norway:Aas

text: metagenome


text: NIAMS, NIH

text: live

text: Generic

characteristic: antibody

text: KO

characteristic: genotype

text: Mus musculus

text: KO

text: KO_H3K27me3 chipseq_rep2


text: NIAMS, NIH

characteristic: INSDC first public

text: live

text: Generic

text: none (input)

text: KO

text: Mus musculus

characteristic: organism

text: KO

text: KO_Input chipseq_rep2


text: NIAMS, NIH

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: WT

text: Mus musculus

text: WT

text: WT_H3K27me3 chipseq_rep2


text: NIAMS, NIH

text: live

characteristic: INSDC status

text: Generic

text: none (input)

text: WT

text: Mus musculus

text: WT

text: WT_Input chipseq_rep2

characteristic: title


text: NIAMS, NIH

text: live

text: Generic

characteristic: NCBI submission model

characteristic: SRA accession

text: KO

text: Mus musculus

text: KO

text: KO_H3K27me3 chipseq_rep1


text: NIAMS, NIH

text: live

text: Generic

text: none (input)

text: KO

text: Mus musculus

text: KO

text: KO_Input chipseq_rep1


text: NIAMS, NIH

text: live

text: Generic

text: WT

text: Mus musculus

text: WT

text: WT_H3K27me3 chipseq_rep1


text: NIAMS, NIH

text: live

text: Generic

text: none (input)

text: WT

text: Mus musculus

text: WT

text: WT_Input chipseq_rep1


text: NIAMS, NIH

text: live

text: Generic

text: Mus musculus

text: QSC_KO- scRNAseq_rep1


text: NIAMS, NIH

text: live

text: Generic

text: Mus musculus

text: QSC_WT- scRNAseq_rep1


text: NIAMS, NIH

text: live

text: Generic

text: Mus musculus

text: QSC_KO_bulk ATACseq_rep1


text: NIAMS, NIH

text: live

text: Generic

text: Mus musculus

text: QSC_WT_bulk ATACseq_rep1


text: NIAMS, NIH

text: live

text: Generic

text: Mus musculus

text: QSC_KO_bulk RNAseq_rep3


text: NIAMS, NIH

text: live

text: Generic

text: Mus musculus

text: QSC_KO_bulk RNAseq_rep2


text: NIAMS, NIH

text: live

text: Generic

text: Mus musculus

text: QSC_KO_bulk RNAseq_rep1


text: NIAMS, NIH

text: live

text: Generic

text: Mus musculus

text: QSC_WT_bulk RNAseq_rep3


text: NIAMS, NIH

text: live

text: Generic

text: Mus musculus

text: QSC_WT_bulk RNAseq_rep2


text: NIAMS, NIH

text: live

text: Generic

text: Mus musculus

text: QSC_WT_bulk RNAseq_rep1


text: ZMF, University Heidelberg

text: live

text: Generic

characteristic: group

text: Mus musculus

text: malignant melanoma cells

text: mouse melanoma - WT31 subline after 5 passages - biological repilcate 5


characteristic: External Id

text: ZMF, University Heidelberg

text: live

text: Generic

text: Mus musculus

text: malignant melanoma cells

text: mouse melanoma - WT31 subline after 5 passages - biological repilcate 4


text: ZMF, University Heidelberg

text: live

text: Generic

text: Mus musculus

text: malignant melanoma cells

text: mouse melanoma - WT31 subline after 5 passages - biological repilcate 3


text: ZMF, University Heidelberg

text: live

text: Generic

text: Mus musculus

text: malignant melanoma cells

text: mouse melanoma - WT31 subline after 5 passages - biological repilcate 2


text: ZMF, University Heidelberg

text: live

text: Generic

text: Mus musculus

text: malignant melanoma cells

text: mouse melanoma - WT31 subline after 5 passages - biological repilcate 1


text: ZMF, University Heidelberg

text: live

text: Generic

text: Mus musculus

text: malignant melanoma cells

text: mouse melanoma - WT31 - parental biological repilcate 5


text: ZMF, University Heidelberg

text: live

text: Generic

text: Mus musculus

text: malignant melanoma cells

text: mouse melanoma - WT31 - parental biological repilcate 4


text: ZMF, University Heidelberg

text: live

text: Generic

text: Mus musculus

text: malignant melanoma cells

text: mouse melanoma - WT31 - parental biological repilcate 3


text: ZMF, University Heidelberg

text: live

text: Generic

text: Mus musculus

text: malignant melanoma cells

text: mouse melanoma - WT31 - parental biological repilcate 2


text: ZMF, University Heidelberg

text: live

text: Generic

text: Mus musculus

text: malignant melanoma cells

text: mouse melanoma - WT31 - parental biological repilcate 1


text: Princeton University

text: live

text: MIMS.me

characteristic: depth

text: Keywords: GSC:MIxS;MIMS:6.0

characteristic: elev

text: Sediment

text: Deep sea

text: Marine

text: Mexico:Gulf of California

text: 27.47 N 111.47 W

text: marine sediment metagenome

text: MIMS Environmental/Metagenome sample from marine sediment metagenome


text: Princeton University

characteristic: INSDC center name

text: live

text: MIMS.me

characteristic: NCBI submission package

text: Keywords: GSC:MIxS;MIMS:6.0

text: Sediment

text: Deep sea

text: Marine

text: Mexico:Gulf of California

text: deep-sea sediment

text: 27.01 N 111.41 W

text: marine sediment metagenome

type: drived-from


text: Princeton University

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

characteristic: description

text: Sediment

text: Deep sea

text: Marine

text: Mexico:Gulf of California

text: deep-sea sediment

text: 27.02 N 111.41 W

text: marine sediment metagenome


text: Microbiology & Immunology, Cornell University

text: live

text: Generic

text: B

characteristic: batch

text: sgNK

characteristic: cell type

text: B6 Eomes-GFP

text: Mus musculus

characteristic: replicate

text: SG

text: SG

characteristic: tissue


characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: A

text: sgNK

text: B6 Eomes-GFP

characteristic: genotype

text: Mus musculus

characteristic: organism

text: SG

text: SG


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: B

text: NK

text: B6 Eomes-GFP

text: Mus musculus

text: SG

text: SG

characteristic: title


characteristic: External Id

text: live

text: Generic

characteristic: SRA accession

text: A

text: NK

text: B6 Eomes-GFP

text: Mus musculus

text: SG

text: SG


characteristic: INSDC center name

text: live

text: Generic

text: B

text: B6 Eomes-GFP

text: Mus musculus

text: SG

text: SG


text: live

text: Generic

characteristic: NCBI submission package

text: A

text: B6 Eomes-GFP

text: Mus musculus

text: SG

text: SG


text: live

text: Generic

text: B

text: NK

text: B6 Eomes-GFP

text: Mus musculus

text: LIV

text: LIV


text: live

text: Generic

text: B

text: B6 Eomes-GFP

text: Mus musculus

text: LIV

text: LIV


text: Lithuanian University of Health Sciences

text: live

text: Generic

text: Healthy

characteristic: disease

text: Homo sapiens

text: Normal Brain

text: Normal Brain

text: Healthy_Brain, Control


text: live

text: Generic

text: LGG

text: Homo sapiens

text: Glioma surgical sample

text: Glioma surgical sample

text: LGG, Patient_9


text: live

text: Generic

text: LGG

text: Homo sapiens

text: Glioma surgical sample

text: Glioma surgical sample

text: LGG, Patient_8


text: live

text: Generic

text: LGG

text: Homo sapiens

text: Glioma surgical sample

text: Glioma surgical sample

text: LGG, Patient_7


text: live

text: Generic

text: LGG

text: Homo sapiens

text: Glioma surgical sample

text: Glioma surgical sample

text: LGG, Patient_6


text: live

text: Generic

text: GB

text: Homo sapiens

text: Glioma surgical sample

text: Glioma surgical sample

text: GB, Patient_17


text: live

text: Generic

text: GB

text: Homo sapiens

text: Glioma surgical sample

text: Glioma surgical sample

text: GB, Patient_16


text: live

text: Generic

text: GB

text: Homo sapiens

text: Glioma surgical sample

text: Glioma surgical sample

text: GB, Patient_15


text: live

text: Generic

text: GB

text: Homo sapiens

text: Glioma surgical sample

text: Glioma surgical sample

text: GB, Patient_14


text: live

text: Generic

text: GB

text: Homo sapiens

text: Glioma surgical sample

text: Glioma surgical sample

text: GB, Patient_13


text: live

text: Generic

text: GB

text: Homo sapiens

text: Glioma surgical sample

text: Glioma surgical sample

text: GB, Patient_12


text: live

text: Generic

text: GB

text: Homo sapiens

text: Glioma surgical sample

text: Glioma surgical sample

text: GB, Patient_11


text: live

text: Generic

text: GB

text: Homo sapiens

text: Glioma surgical sample

text: Glioma surgical sample

text: GB, Patient_10


text: live

text: Generic

text: GB

text: Homo sapiens

text: Glioma surgical sample

text: Glioma surgical sample

text: GB, Patient_9


text: live

text: Generic

text: GB

text: Homo sapiens

text: Glioma surgical sample

text: Glioma surgical sample

text: GB, Patient_8


text: live

text: Generic

text: GB

text: Homo sapiens

text: Glioma surgical sample

text: Glioma surgical sample

text: GB, Patient_7


text: live

text: Generic

text: GB

text: Homo sapiens

text: Glioma surgical sample

text: Glioma surgical sample

text: GB, Patient_6


text: live

text: Generic

text: LGG

text: Homo sapiens

text: Glioma surgical sample

text: Glioma surgical sample

text: LGG, Patient_5


text: live

text: Generic

text: LGG

text: Homo sapiens

text: Glioma surgical sample

text: Glioma surgical sample

text: LGG, Patient_4


text: live

text: Generic

text: LGG

text: Homo sapiens

text: Glioma surgical sample

text: Glioma surgical sample

text: LGG, Patient_3


text: live

text: Generic

text: LGG

text: Homo sapiens

text: Glioma surgical sample

text: Glioma surgical sample

text: LGG, Patient_2


text: live

text: Generic

text: GB

text: Homo sapiens

text: Glioma surgical sample

text: Glioma surgical sample

text: GB, Patient_5


text: live

text: Generic

text: GB

text: Homo sapiens

text: Glioma surgical sample

text: Glioma surgical sample

text: GB, Patient_4


text: live

text: Generic

text: GB

text: Homo sapiens

text: Glioma surgical sample

text: Glioma surgical sample

text: GB, Patient_3


text: live

text: Generic

text: GB

text: Homo sapiens

text: Glioma surgical sample

text: Glioma surgical sample

text: GB, Patient_2


text: live

text: Generic

text: LGG

text: Homo sapiens

text: Glioma surgical sample

text: Glioma surgical sample

text: LGG, Patient_1


text: live

text: Generic

text: GB

text: Homo sapiens

text: Glioma surgical sample

text: Glioma surgical sample

text: GB, Patient_1


text: Stem cell and developmental neurobiology, Department of Neuroscience, KU Leuven-VIB

text: live

text: Generic

text: Homo sapiens

text: Fresh

characteristic: sample status

characteristic: sample type

text: in vitro

text: in vitro

text: 10x snRNA-seq on in vitro birthdated 39d old cortical neurons (271ba0)


text: live

text: Generic

characteristic: cell type

text: Homo sapiens

text: Fresh

text: in vitro

text: in vitro

text: 10x snRNA-seq on in vitro birthdated 24d old cortical neurons (0fdbfb)


text: live

text: Generic

text: Homo sapiens

text: Fresh

text: in vitro

text: in vitro

characteristic: tissue

text: 10x snRNA-seq on in vitro birthdated 9d old cortical neurons (1bd629)


Streptomyces strain ID71268

text: Naicons Laboratories

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: Venezuela

text: soil

text: Streptomyces sp. 71268

text: cell culture

characteristic: strain

text: Microbe sample from Streptomyces sp. 71268


ENCODE biosample ENCBS002VIT

text: ENCODE

characteristic: INSDC last update

text: live

text: Generic

text: 53 year

characteristic: age

characteristic: cell line

text: Homo sapiens K562 cell line genetically modified (deletion) using CRISPR targeting H. sapiens DCP1A

characteristic: description

text: adult

characteristic: dev stage

characteristic: donor ID

text: chronic myelogenous leukemia (CML)

characteristic: health state

text: Brenton Graveley, UConn

characteristic: lab

text: Homo sapiens

text: cell line

text: female

characteristic: sex

text: ATCC

characteristic: source

text: ENCODE biosample ENCBS002VIT: RNA-seq on K562 cells treated with a CRISPR gRNA against DCP1A. (DCP1A-BGKcLV28-61)


ENCODE biosample ENCBS003ZLT

characteristic: External Id

text: ENCODE

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: 15 year

text: Homo sapiens HepG2 cell line

text: child

text: hepatocellular carcinoma

text: Ali Mortazavi, UCI

text: Homo sapiens

characteristic: organism

text: cell line

text: male

text: ATCC

text: ENCODE biosample ENCBS003ZLT: HepG2

characteristic: title


ENCODE biosample ENCBS005GZJ

text: ENCODE

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

text: 53 year

characteristic: age

characteristic: cell line

text: Homo sapiens K562 cell line treated with 10 uM AR-42 for 24 hours, preserved by flash-freezing

text: adult

text: chronic myelogenous leukemia (CML)

text: Will Greenleaf, Stanford

text: Homo sapiens

text: cell line

characteristic: sample type

text: female

text: ATCC

text: ENCODE biosample ENCBS005GZJ: RNA-seq on human cell line K562

text: treatment_term_name: AR-42; treatment_type: chemical; duration: 24; duration_units: hour; temperature: 37; temperature_units: Celsius;

characteristic: treatments


ENCODE biosample ENCBS007PNL

text: ENCODE

text: live

text: Generic

text: 21 year

text: CD4-positive, CD25-positive, alpha-beta regulatory T cell

characteristic: cell type

text: Homo sapiens female adult (21 years) CD4-positive, CD25-positive, alpha-beta regulatory T primary cell

characteristic: description

text: adult

characteristic: dev stage

characteristic: donor ID

text: John Stamatoyannopoulos, UW

characteristic: lab

text: Homo sapiens

text: primary cell

text: female

characteristic: sex

text: StemExpress

text: ENCODE biosample ENCBS007PNL


ENCODE biosample ENCBS007ZIG

characteristic: External Id

text: ENCODE

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: 48 year

text: Homo sapiens HCT116 cell line genetically modified (insertion) using CRISPR inserting O. sativa LOC4335696, genetically modified (insertion) using CRISPR targeting H. sapiens MED14

text: adult

text: colorectal carcinoma

characteristic: health state

text: Erez Aiden, Baylor

text: Homo sapiens

text: cell line

text: male

text: Dr. Masato Kanemaki

characteristic: source

text: ENCODE biosample ENCBS007ZIG


ENCODE biosample ENCBS010FNJ

text: ENCODE

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: 53 year

characteristic: age

text: Homo sapiens K562 cell line

text: adult

text: chronic myelogenous leukemia (CML)

text: John Lis, Cornell

text: Homo sapiens

characteristic: organism

text: cell line

text: female

text: ATCC

text: ENCODE biosample ENCBS010FNJ

characteristic: title


ENCODE biosample ENCBS010UIL

text: ENCODE

text: live

text: Generic

text: 53 year

characteristic: cell line

text: Homo sapiens K562 cell line genetically modified (deletion) using CRISPR targeting H. sapiens CAND1

characteristic: description

text: adult

characteristic: dev stage

characteristic: donor ID

text: chronic myelogenous leukemia (CML)

text: Brenton Graveley, UConn

text: Homo sapiens

text: cell line

characteristic: sample type

text: female

text: ATCC

text: ENCODE biosample ENCBS010UIL: RNA-seq on K562 cells treated with a CRISPR gRNA against CAND1. (CAND1-BGKcLV26-51)


ENCODE biosample ENCBS011AMX

characteristic: External Id

text: ENCODE

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Generic

text: 15 year

text: Homo sapiens HepG2 cell line genetically modified (deletion) using CRISPR targeting H. sapiens SAMHD1

text: child

text: hepatocellular carcinoma

text: Brenton Graveley, UConn

characteristic: lab

text: Homo sapiens

text: cell line

text: male

characteristic: sex

text: ATCC

text: ENCODE biosample ENCBS011AMX: RNA-seq on HepG2 cells treated with a CRISPR gRNA against SAMHD1. (SAMHD1-BGHcLV31-24)


ENCODE biosample ENCBS013NVH

text: ENCODE

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: 53 year

text: Homo sapiens K562 cell line genetically modified (deletion) using CRISPR targeting H. sapiens RUVBL1

text: adult

text: chronic myelogenous leukemia (CML)

characteristic: health state

text: Brenton Graveley, UConn

text: Homo sapiens

text: cell line

text: female

text: ATCC

characteristic: source

text: ENCODE biosample ENCBS013NVH: RNA-seq on K562 cells treated with a CRISPR gRNA against RPUSD2. (RPUSD2-BGKcLV33-18)


ENCODE biosample ENCBS013TYT

text: ENCODE

characteristic: INSDC last update

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: 36 year

characteristic: age

text: Homo sapiens HL-60 cell line treated with 10 uM phorbol 13-acetate 12-myristate for 120 hours, 100 ng/mL interferon gamma for 72 hours, 100 ng/mL lipopolysaccharide for 72 hours

text: adult

text: acute promyelocytic leukemia

text: Ali Mortazavi, UCI

text: Homo sapiens

characteristic: organism

text: cell line

text: female

text: ATCC

text: ENCODE biosample ENCBS013TYT: HL-60 derived M1 macrophages (72hr)

text: treatment_term_id: CHEBI:37537; treatment_term_name: phorbol 13-acetate 12-myristate; treatment_type: chemical; duration: 120; duration_units: hour; treatment_term_id: UniProtKB:P01579; treatment_term_name: interferon gamma; treatment_type: protein; duration: 72; duration_units: hour; treatment_term_id: CHEBI:16412; treatment_term_name: lipopolysaccharide; treatment_type: chemical; duration: 72; duration_units: hour;

characteristic: treatments


ENCODE biosample ENCBS014WRU

text: ENCODE

text: live

text: Generic

text: 48 year

characteristic: cell line

text: Homo sapiens HCT116 cell line genetically modified (insertion) using CRISPR inserting O. sativa LOC4335696, genetically modified (insertion) using CRISPR targeting H. sapiens CTCF

characteristic: description

text: adult

characteristic: dev stage

characteristic: donor ID

text: colorectal carcinoma

text: Erez Aiden, Baylor

text: Homo sapiens

text: cell line

characteristic: sample type

text: male

text: Dr. Masato Kanemaki

text: ENCODE biosample ENCBS014WRU

characteristic: title


ENCODE biosample ENCBS016YPR

characteristic: External Id

text: ENCODE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Generic

text: Homo sapiens GM12878 cell line

text: adult

text: Ali Mortazavi, UCI

characteristic: lab

text: Homo sapiens

text: cell line

text: female

characteristic: sex

text: Coriell

text: ENCODE biosample ENCBS016YPR: GM12878


ENCODE biosample ENCBS020DQC

text: ENCODE

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 72 year

text: Homo sapiens Caco-2 cell line

text: adult

text: colorectal adenocarcinoma

characteristic: health state

text: Mats Ljungman, UMichigan

text: Homo sapiens

text: cell line

text: male

text: ATCC

characteristic: source

text: ENCODE biosample ENCBS020DQC


ENCODE biosample ENCBS022KRD

text: ENCODE

text: live

text: Generic

characteristic: SRA accession

text: 53 year

characteristic: age

characteristic: cell line

text: Homo sapiens K562 cell line genetically modified (deletion) using CRISPR targeting H. sapiens APEH

characteristic: description

text: adult

text: chronic myelogenous leukemia (CML)

text: Brenton Graveley, UConn

text: Homo sapiens

characteristic: organism

text: cell line

text: female

text: ATCC

text: ENCODE biosample ENCBS022KRD: RNA-seq on K562 cells treated with a CRISPR gRNA against APEH. (APEH-BGKcLV26-25)


ENCODE biosample ENCBS023BGM

characteristic: External Id

text: ENCODE

text: live

text: Generic

text: 15 year

text: Homo sapiens HepG2 cell line genetically modified (deletion) using CRISPR targeting H. sapiens SEC23IP

text: child

characteristic: dev stage

characteristic: donor ID

text: hepatocellular carcinoma

text: Brenton Graveley, UConn

text: Homo sapiens

text: cell line

characteristic: sample type

text: male

text: ATCC

text: ENCODE biosample ENCBS023BGM: RNA-seq on HepG2 cells treated with a CRISPR gRNA against SEC23IP. (SEC23IP-BGHcLV31-31)

characteristic: title


ENCODE biosample ENCBS024CFI

text: ENCODE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Generic

text: 15 year

text: Homo sapiens HepG2 cell line genetically modified (deletion) using CRISPR targeting H. sapiens SEPT11

text: child

text: hepatocellular carcinoma

text: Brenton Graveley, UConn

characteristic: lab

text: Homo sapiens

text: cell line

text: male

characteristic: sex

text: ATCC

text: ENCODE biosample ENCBS024CFI: RNA-seq on HepG2 cells treated with a CRISPR gRNA against SEPT11. (SEPT11-BGHcLV31-41)


ENCODE biosample ENCBS026SMB

text: ENCODE

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 15 year

text: Homo sapiens HepG2 cell line genetically modified (deletion) using CRISPR targeting H. sapiens API5

text: child

text: hepatocellular carcinoma

characteristic: health state

text: Brenton Graveley, UConn

text: Homo sapiens

text: cell line

text: male

text: ATCC

text: ENCODE biosample ENCBS026SMB: RNA-seq on HepG2 cells treated with a CRISPR gRNA against API5. (API5-BGHcLV27-12)


ENCODE biosample ENCBS029UTH

text: ENCODE

text: live

text: Generic

characteristic: SRA accession

text: 15 year

characteristic: age

characteristic: cell line

text: Homo sapiens HepG2 cell line genetically modified (deletion) using CRISPR targeting H. sapiens SEC62

characteristic: description

text: child

text: hepatocellular carcinoma

text: Brenton Graveley, UConn

text: Homo sapiens

text: cell line

text: male

text: ATCC

characteristic: source

text: ENCODE biosample ENCBS029UTH: RNA-seq on HepG2 cells treated with a CRISPR gRNA against SEC62. (SEC62-BGHcLV31-36)


ENCODE biosample ENCBS032AKF

characteristic: External Id

text: ENCODE

text: live

text: Generic

text: 48 year

text: Homo sapiens HCT116 cell line genetically modified (insertion) using CRISPR inserting O. sativa LOC4335696, genetically modified (insertion) using CRISPR targeting H. sapiens SMARCA5

text: adult

characteristic: dev stage

characteristic: donor ID

text: colorectal carcinoma

text: Erez Aiden, Baylor

text: Homo sapiens

characteristic: organism

text: cell line

characteristic: sample type

text: male

text: Dr. Masato Kanemaki

text: ENCODE biosample ENCBS032AKF


ENCODE biosample ENCBS032OUD

text: ENCODE

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Generic

text: 53 year

text: Homo sapiens K562 cell line treated with 10 uM AR-42 for 12 hours, preserved by flash-freezing

text: adult

text: chronic myelogenous leukemia (CML)

text: Will Greenleaf, Stanford

characteristic: lab

text: Homo sapiens

text: cell line

text: female

text: ATCC

text: ENCODE biosample ENCBS032OUD: RNA-seq on human cell line K562

characteristic: title

text: treatment_term_name: AR-42; treatment_type: chemical; duration: 12; duration_units: hour; temperature: 37; temperature_units: Celsius;

characteristic: treatments


ENCODE biosample ENCBS033RQQ

text: ENCODE

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 53 year

text: Homo sapiens K562 cell line genetically modified (deletion) using CRISPR targeting H. sapiens BYSL

text: adult

text: chronic myelogenous leukemia (CML)

characteristic: health state

text: Brenton Graveley, UConn

text: Homo sapiens

text: cell line

text: female

characteristic: sex

text: ATCC

text: ENCODE biosample ENCBS033RQQ: RNA-seq on K562 cells treated with a CRISPR gRNA against BYSL. (BYSL-BGKcLV26-44)


ENCODE biosample ENCBS035SQW

characteristic: External Id

text: ENCODE

text: live

text: Generic

characteristic: SRA accession

text: 53 year

characteristic: age

characteristic: cell line

text: Homo sapiens K562 cell line genetically modified (deletion) using CRISPR targeting H. sapiens AGFG1

characteristic: description

text: adult

text: chronic myelogenous leukemia (CML)

text: Brenton Graveley, UConn

text: Homo sapiens

text: cell line

text: female

text: ATCC

characteristic: source

text: ENCODE biosample ENCBS035SQW: RNA-seq on K562 cells treated with a CRISPR gRNA against AGFG1. (AGFG1-BGKcLV26-15)


ENCODE biosample ENCBS036MOJ

text: ENCODE

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: 90 or above year

text: Homo sapiens female adult (90 or above years) with mild cognitive impairment; middle frontal area 46 tissue

text: adult

characteristic: dev stage

characteristic: donor ID

text: Barbara Wold, Caltech

text: Homo sapiens

characteristic: organism

text: tissue

characteristic: sample type

text: female

text: Rush University

text: middle frontal area 46

characteristic: tissue

text: ENCODE biosample ENCBS036MOJ: human_brain_Rush ID_E5352389_BS201_ENC4_cDNA756


ENCODE biosample ENCBS039ENC

text: ENCODE

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

text: 53 year

text: Homo sapiens K562 cell line

text: adult

text: chronic myelogenous leukemia (CML)

text: Thomas Gingeras, CSHL

characteristic: lab

text: Homo sapiens

text: cell line

text: female

text: ATCC

text: ENCODE biosample ENCBS039ENC: leukemia, The continuous cell line K-562 was established by Lozzio and Lozzio from the pleural effusion of a 53-year-old female with chronic myelogenous leukemia in terminal blast crises. - ATCC

characteristic: title


ENCODE biosample ENCBS039KEI

characteristic: External Id

text: ENCODE

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission package

characteristic: SRA accession

text: 58 year

text: Homo sapiens A549 cell line treated with 1 uM GW870086 (agonist) for 4 hours

text: adult

text: Tim Reddy, Duke

text: Homo sapiens

text: cell line

text: male

characteristic: sex

text: ATCC

text: ENCODE biosample ENCBS039KEI

text: treatment_term_name: GW870086; treatment_type: chemical; duration: 4; duration_units: hour;

characteristic: treatments


ENCODE biosample ENCBS039NUK

text: ENCODE

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

text: 15 year

characteristic: age

characteristic: cell line

text: Homo sapiens HepG2 cell line genetically modified (deletion) using CRISPR targeting H. sapiens ALKBH1

characteristic: description

text: child

text: hepatocellular carcinoma

characteristic: health state

text: Brenton Graveley, UConn

text: Homo sapiens

text: cell line

text: male

text: ATCC

characteristic: source

text: ENCODE biosample ENCBS039NUK: RNA-seq on HepG2 cells treated with a CRISPR gRNA against ALKBH1. (ALKBH1-BGHcLV24-9)


ENCODE biosample ENCBS039UVG

text: ENCODE

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

text: 53 year

text: Homo sapiens K562 cell line genetically modified (deletion) using CRISPR targeting H. sapiens RRP8

text: adult

characteristic: dev stage

characteristic: donor ID

text: chronic myelogenous leukemia (CML)

text: Brenton Graveley, UConn

text: Homo sapiens

characteristic: organism

text: cell line

characteristic: sample type

text: female

text: ATCC

text: ENCODE biosample ENCBS039UVG: RNA-seq on K562 cells treated with a CRISPR gRNA against RPS21. (RPS21-BGKcLV33-12)


ENCODE biosample ENCBS040HBG

characteristic: External Id

text: ENCODE

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Homo sapiens PC-9 cell line, subjected to a 6 hour pulse-chase

text: Mats Ljungman, UMichigan

characteristic: lab

text: Homo sapiens

text: cell line

text: not collected

text: Sigma

text: ENCODE biosample ENCBS040HBG

characteristic: title


ENCODE biosample ENCBS041CQT

text: ENCODE

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Generic

characteristic: SRA accession

text: 53 year

characteristic: age

text: Homo sapiens K562 cell line genetically modified (deletion) using CRISPR targeting H. sapiens CCT4

text: adult

text: chronic myelogenous leukemia (CML)

text: Brenton Graveley, UConn

text: Homo sapiens

text: cell line

text: female

characteristic: sex

text: ATCC

text: ENCODE biosample ENCBS041CQT: RNA-seq on K562 cells treated with a CRISPR gRNA against CCT4. (CCT4-BGKcLV28-7)


ENCODE biosample ENCBS042LWS

text: ENCODE

characteristic: INSDC last update

text: live

text: Generic

text: 36 year

characteristic: cell line

text: Homo sapiens HL-60 cell line treated with 10 uM phorbol 13-acetate 12-myristate for 120 hours

characteristic: description

text: adult

text: acute promyelocytic leukemia

characteristic: health state

text: Ali Mortazavi, UCI

text: Homo sapiens

text: cell line

text: female

text: ATCC

characteristic: source

text: ENCODE biosample ENCBS042LWS: HL-60 derived M0 macrophages

text: treatment_term_id: CHEBI:37537; treatment_term_name: phorbol 13-acetate 12-myristate; treatment_type: chemical; duration: 120; duration_units: hour;

characteristic: treatments


ENCODE biosample ENCBS042QOZ

characteristic: External Id

text: ENCODE

text: live

characteristic: INSDC status

text: Generic

text: 53 year

text: Homo sapiens K562 cell line genetically modified (deletion) using CRISPR targeting H. sapiens SEC23IP

text: adult

characteristic: dev stage

characteristic: donor ID

text: chronic myelogenous leukemia (CML)

text: Brenton Graveley, UConn

text: Homo sapiens

characteristic: organism

text: cell line

characteristic: sample type

text: female

text: ATCC

text: ENCODE biosample ENCBS042QOZ: RNA-seq on K562 cells treated with a CRISPR gRNA against SAP30BP. (SAP30BP-BGKcLV33-29)


ENCODE biosample ENCBS043OMI

text: ENCODE

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 53 year

text: Homo sapiens K562 cell line genetically modified (deletion) using CRISPR targeting H. sapiens CLTC

text: adult

text: chronic myelogenous leukemia (CML)

text: Brenton Graveley, UConn

characteristic: lab

text: Homo sapiens

text: cell line

text: female

text: ATCC

text: ENCODE biosample ENCBS043OMI: RNA-seq on K562 cells treated with a CRISPR gRNA against CLTC. (CLTC-BGKcLV28-23)

characteristic: title


ENCODE biosample ENCBS044SUT

text: ENCODE

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: SRA accession

text: 15 year

characteristic: age

characteristic: cell line

text: Homo sapiens HepG2 cell line genetically modified (deletion) using CRISPR targeting H. sapiens EIF6

text: child

text: hepatocellular carcinoma

text: Brenton Graveley, UConn

text: Homo sapiens

text: cell line

text: male

characteristic: sex

text: ATCC

text: ENCODE biosample ENCBS044SUT: RNA-seq on HepG2 cells treated with a CRISPR gRNA against EIF6. (EIF6-BGHcLV24-30)


ENCODE biosample ENCBS044WRF

characteristic: External Id

text: ENCODE

text: live

characteristic: INSDC status

text: Generic

text: 15 year

text: Homo sapiens HepG2 cell line genetically modified (deletion) using CRISPR

characteristic: description

text: child

text: hepatocellular carcinoma

characteristic: health state

text: Brenton Graveley, UConn

text: Homo sapiens

text: cell line

text: male

text: ATCC

characteristic: source

text: ENCODE biosample ENCBS044WRF: Control CRISPR gRNA against no target in HepG2 cells followed by RNA-seq. (NT-BGHcLV24-1)


ENCODE biosample ENCBS045QZE

text: ENCODE

characteristic: INSDC center name

text: live

text: Generic

text: 53 year

text: Homo sapiens K562 cell line genetically modified (deletion) using CRISPR targeting H. sapiens RPS21

text: adult

characteristic: dev stage

characteristic: donor ID

text: chronic myelogenous leukemia (CML)

text: Brenton Graveley, UConn

text: Homo sapiens

characteristic: organism

text: cell line

characteristic: sample type

text: female

text: ATCC

text: ENCODE biosample ENCBS045QZE: RNA-seq on K562 cells treated with a CRISPR gRNA against BMS1. (BMS1-BGKcLV33-3)


ENCODE biosample ENCBS045SWE

text: ENCODE

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 53 year

text: Homo sapiens K562 cell line genetically modified (deletion) using CRISPR targeting H. sapiens RECQL5

text: adult

text: chronic myelogenous leukemia (CML)

text: Brenton Graveley, UConn

characteristic: lab

text: Homo sapiens

text: cell line

text: female

text: ATCC

text: ENCODE biosample ENCBS045SWE: RNA-seq on K562 cells treated with a CRISPR gRNA against RECQL5. (RECQL5-BGKcLV30-30)

characteristic: title


ENCODE biosample ENCBS046CJD

text: ENCODE

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Generic

characteristic: SRA accession

text: 88 year

characteristic: age

text: Homo sapiens female adult (88 years) with Alzheimer's disease; middle frontal area 46 tissue

text: adult

text: Barbara Wold, Caltech

text: Homo sapiens

text: tissue

text: female

text: Rush University

text: middle frontal area 46

characteristic: tissue

text: ENCODE biosample ENCBS046CJD: human_brain_Rush ID_E8325260_BS168_ENC4_cDNA718


ENCODE biosample ENCBS047GNX

characteristic: External Id

text: ENCODE

text: live

characteristic: INSDC status

text: Generic

text: 53 year

characteristic: cell line

text: Homo sapiens K562 cell line genetically modified (deletion) using CRISPR targeting H. sapiens DDX10

characteristic: description

text: adult

text: chronic myelogenous leukemia (CML)

characteristic: health state

text: Brenton Graveley, UConn

text: Homo sapiens

text: cell line

text: female

characteristic: sex

text: ATCC

text: ENCODE biosample ENCBS047GNX: RNA-seq on K562 cells treated with a CRISPR gRNA against DDX10. (DDX10-BGKcLV28-68)


ENCODE biosample ENCBS047HSL

text: ENCODE

characteristic: INSDC center name

text: live

text: Generic

text: 90 or above year

text: Homo sapiens female adult (90 or above years) with mild cognitive impairment; middle frontal area 46 tissue

text: adult

characteristic: dev stage

characteristic: donor ID

text: Barbara Wold, Caltech

text: Homo sapiens

characteristic: organism

text: tissue

characteristic: sample type

text: female

text: Rush University

characteristic: source

text: middle frontal area 46

text: ENCODE biosample ENCBS047HSL: human_brain_Rush ID_E5124249_BS200_ENC4_cDNA755


ENCODE biosample ENCBS047LTL

text: ENCODE

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 53 year

text: Homo sapiens K562 cell line treated with 7.5 nM Panobinostat for 4 hours, preserved by flash-freezing

text: adult

text: chronic myelogenous leukemia (CML)

text: Will Greenleaf, Stanford

characteristic: lab

text: Homo sapiens

text: cell line

text: female

text: ATCC

text: ENCODE biosample ENCBS047LTL: RNA-seq on human cell line K562

characteristic: title

text: treatment_term_name: Panobinostat; treatment_type: chemical; duration: 4; duration_units: hour; temperature: 37; temperature_units: Celsius;

characteristic: treatments


ENCODE biosample ENCBS048EXC

characteristic: External Id

text: ENCODE

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: SRA accession

text: 86 year

characteristic: age

text: Homo sapiens female adult (86 years) with Alzheimer's disease; middle frontal area 46 tissue

text: adult

text: Barbara Wold, Caltech

text: Homo sapiens

text: tissue

text: female

text: Rush University

text: middle frontal area 46

characteristic: tissue

text: ENCODE biosample ENCBS048EXC: human_brain_Rush ID_2842953_BS95_ENC4_cDNA672


ENCODE biosample ENCBS048HBZ

text: ENCODE

characteristic: INSDC center name

text: live

text: Generic

text: 48 year

characteristic: cell line

text: Homo sapiens HCT116 cell line genetically modified (insertion) using CRISPR inserting O. sativa LOC4335696, genetically modified (insertion) using CRISPR targeting H. sapiens MED14

characteristic: description

text: adult

characteristic: dev stage

characteristic: donor ID

text: colorectal carcinoma

characteristic: health state

text: Erez Aiden, Baylor

text: Homo sapiens

text: cell line

text: male

characteristic: sex

text: Dr. Masato Kanemaki

text: ENCODE biosample ENCBS048HBZ


ENCODE biosample ENCBS049BPX

text: ENCODE

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: 30 year

text: Homo sapiens WTC11 cell line, preserved by flash-freezing

text: adult

text: Will Greenleaf, Stanford

text: Homo sapiens

characteristic: organism

text: cell line

characteristic: sample type

text: male

text: Coriell

characteristic: source

text: ENCODE biosample ENCBS049BPX: iPSC