Unio delphinus BIV7592

text: Interdisciplinary Centre of Marine and Environmental Research (CIIMAR) / University of Porto

text: live

text: Invertebrate

text: Amilcar Teixeira

text: Mussels of order Unionida are a group of strictly freshwater bivalves with nearly 1,000 described species widely dispersed across world freshwater ecosystems. Despite their fundamental ecological importance, they are highly threatened, with the highest records of extinction events within faunal taxa. Conservation is particularly concerning in species occurring in the Mediterranean biodiversity hotspot that are exposed to multiple anthropogenic threats including global warming predictions and water shortage. That is the case of the dolphin freshwater mussel Unio delphinus Spengler, 1793, endemic to the western Iberian Peninsula with recently strong population declines. To date, only four genome assemblies are available for the order Unionida and only one is from a species present in Europe. Here, we present the first genome assembly of the Iberian dolphin freshwater mussel Unio delphinus. We used the PacBio HiFi long-read technology to generate a highly contiguous genome assembly of U. delphinus. The assembly is 2.5 Gb long, possessing 1254 contigs with a contig N50 length of 10 Mbp. This is the most contiguous freshwater mussel genome assembly to date and is an essential resource for investigate the species biology and evolutionary history that ultimately will help to support conservation strategies.

characteristic: description

text: Portugal

text: River

characteristic: label

text: Unio delphinus

text: Mantle

text: Invertebrate sample from Unio delphinus


status: PUBLIC

characteristic: External Id

text: Naturalis Biodiversity Center

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

tag: attribute

text: MIGS/MIMS/MIMARKS.host-associated

characteristic: NCBI submission model

text: MIMARKS.survey

characteristic: NCBI submission package

characteristic: SRA accession

text: Biogeography

characteristic: Study

characteristic: depth

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (1)

text: French Polynesia: Rangiroa

text: Dactylospongia metachromia

characteristic: host

text: 14.96 S 147.71 W

text: marine metagenome

characteristic: organism

characteristic: title


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (2)

text: French Polynesia: Rangiroa

text: Dactylospongia metachromia

text: 14.96 S 147.72 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (3)

text: French Polynesia: Rangiroa

text: Dactylospongia metachromia

text: 14.96 S 147.63 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (4)

text: French Polynesia: Rangiroa

text: Dactylospongia metachromia

text: 14.96 S 147.72 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (5)

text: French Polynesia: Rangiroa

text: Dactylospongia metachromia

text: 14.96 S 147.63 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Farming

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (6)

text: French Polynesia: Rangiroa

text: Dactylospongia metachromia

text: 14.93 S 147.73 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (7)

text: French Polynesia: Rangiroa

text: Dactylospongia metachromia

text: 14.96 S 147.63 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Farming

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (8)

text: French Polynesia: Rangiroa

text: Dactylospongia metachromia

text: 14.93 S 147.73 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (9)

text: French Polynesia: Rangiroa

text: Dactylospongia metachromia

text: 14.96 S 147.71 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Farming

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (10)

text: French Polynesia: Rangiroa

text: Dactylospongia metachromia

text: 14.93 S 147.73 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Farming

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (11)

text: French Polynesia: Rangiroa

text: Dactylospongia metachromia

text: 14.93 S 147.73 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (12)

text: French Polynesia: Rangiroa

text: Dactylospongia metachromia

text: 14.93 S 147.73 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (13)

text: French Polynesia: Rangiroa

text: Dactylospongia metachromia

text: 14.96 S 147.71 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Farming

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (14)

text: French Polynesia: Rangiroa

text: Dactylospongia metachromia

text: 14.93 S 147.73 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (15)

text: French Polynesia: Rangiroa

text: Dactylospongia metachromia

text: 14.93 S 147.73 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Farming

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (16)

text: French Polynesia: Rangiroa

text: Dactylospongia metachromia

text: 14.93 S 147.73 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (17)

text: French Polynesia: Rangiroa

text: Dactylospongia metachromia

text: 14.93 S 147.73 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (18)

text: French Polynesia: Rangiroa

text: Dactylospongia metachromia

text: 14.96 S 147.72 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: negcontrol

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: NegContr

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: Shallow waters (19)

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Farming

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (20)

text: French Polynesia: Rangiroa

text: Dactylospongia metachromia

text: 14.93 S 147.73 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (21)

text: Saudi Arabia: Thuwal

text: Dactylospongia metachromia

text: 22.26 N 39.03 E

text: marine metagenome

text: Red Sea_2


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (22)

text: French Polynesia: Rangiroa

text: Dactylospongia metachromia

text: 14.93 S 147.73 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (23)

text: French Polynesia: Raroia

text: Dactylospongia metachromia

text: 16.03 S 142.44 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (24)

text: French Polynesia: Tetiaroa

text: Dactylospongia metachromia

text: 17 S 149.59 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Farming

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (25)

text: French Polynesia: Rangiroa

text: Dactylospongia metachromia

text: 14.93 S 147.73 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (26)

text: Indonesia: Sulawesi

text: Dactylospongia metachromia

text: 4.86 S 119.38 E

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (27)

text: French Polynesia: Mangareva

text: Dactylospongia metachromia

text: 23.22 S 134.86 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (28)

text: French Polynesia: Raroia

text: Dactylospongia metachromia

text: 16.03 S 142.44 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (29)

text: French Polynesia: Rangiroa

text: Dactylospongia metachromia

text: 14.97 S 147.63 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Farming

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (30)

text: French Polynesia: Rangiroa

text: Dactylospongia metachromia

text: 14.93 S 147.73 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (31)

text: Indonesia: Sulawesi

text: Dactylospongia metachromia

text: 4.85 S 119.4 E

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (32)

text: French Polynesia: Mangareva

text: Dactylospongia metachromia

text: 23.28 S 134.94 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (33)

text: French Polynesia: Raroia

text: Dactylospongia metachromia

text: 16.02 S 142.43 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (34)

text: French Polynesia: Rangiroa

text: Dactylospongia metachromia

text: 14.97 S 147.63 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Farming

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (35)

text: French Polynesia: Rangiroa

text: Dactylospongia metachromia

text: 14.93 S 147.73 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (36)

text: Indonesia: Sulawesi

text: Dactylospongia metachromia

text: 4.86 S 119.38 E

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (37)

text: French Polynesia: Mangareva

text: Dactylospongia metachromia

text: 23.28 S 134.94 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (38)

text: French Polynesia: Raroia

text: Dactylospongia metachromia

text: 16.02 S 142.44 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Blank

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: Shallow waters (39)

text: marine metagenome

text: Blank


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Farming

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (40)

text: French Polynesia: Rangiroa

text: Dactylospongia metachromia

text: 14.93 S 147.73 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (41)

text: French Polynesia: Tematangi

text: Dactylospongia metachromia

text: 21.68 S 140.68 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (42)

text: French Polynesia: Mangareva

text: Dactylospongia metachromia

text: 23.28 S 134.94 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (43)

text: French Polynesia: Raroia

text: Dactylospongia metachromia

text: 16.03 S 142.42 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Farming

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (44)

text: French Polynesia: Rangiroa

text: Dactylospongia metachromia

text: 14.93 S 147.73 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (45)

text: French Polynesia: Tematangi

text: Dactylospongia metachromia

text: 21.63 S 140.65 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (46)

text: French Polynesia: Mangareva

text: Dactylospongia metachromia

text: 23.29 S 134.99 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (47)

text: French Polynesia: Raroia

text: Dactylospongia metachromia

text: 16.02 S 142.42 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (48)

text: Maldives: Faafu Atoll

text: Dactylospongia metachromia

text: 3.11 N 73.02 E

text: marine metagenome

text: Maldives


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (49)

text: French Polynesia: Tematangi

text: Dactylospongia metachromia

text: 21.63 S 140.65 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (50)

text: French Polynesia: Mangareva

text: Dactylospongia metachromia

text: 23.29 S 134.99 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (51)

text: French Polynesia: Makemo

text: Dactylospongia metachromia

text: 16.62 S 143.57 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (52)

text: Saudi Arabia: Thuwal

text: Dactylospongia metachromia

text: 22.26 N 39.03 E

text: marine metagenome

text: Red Sea_1


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (53)

text: French Polynesia: Tematangi

text: Dactylospongia metachromia

text: 21.63 S 140.63 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (54)

text: French Polynesia: Raroia

text: Dactylospongia metachromia

text: 16.03 S 142.42 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Biogeography

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: marine

text: reef

text: Shallow waters (55)

text: French Polynesia: Tetiaroa

text: Dactylospongia metachromia

text: 17 S 149.59 W

text: marine metagenome


text: Naturalis Biodiversity Center

text: live

text: negcontrol

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: NegContr

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: Shallow waters (56)

text: marine metagenome


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Clinical Lab, Aga Khan University Hospital

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-79809-S2/2022

text: Homo sapiens

text: nasopharynx

text: female

characteristic: isolate

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)

text: Infectious Diseases Research Laboratory, Department of Pediatrics and Child Health, Faculty of Health Sciences, Medical College, The Aga Khan University, Stadium Road, Karachi-74800, Pakistan

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-79857-S4/2022

text: Homo sapiens

text: nasopharynx

text: female

text: nasal swab

text: Severe acute respiratory syndrome coronavirus 2

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-79988-S5/2022

text: Homo sapiens

text: nasopharynx

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-80047-S6/2022

text: Homo sapiens

text: nasopharynx

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-80056-S8/2022

text: Homo sapiens

text: nasopharynx

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-80098-S7/2022

text: Homo sapiens

text: nasopharynx

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-80134-S11/2022

text: Homo sapiens

text: nasopharynx

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-80161-S12/2022

text: Homo sapiens

text: nasopharynx

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-80212-S15/2022

text: Homo sapiens

text: nasopharynx

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-80213-S13/2022

text: Homo sapiens

text: nasopharynx

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-80277-S16/2022

text: Homo sapiens

text: nasopharynx

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-80278-S17/2022

text: Homo sapiens

text: nasopharynx

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-79807-S1/2022

text: Homo sapiens

text: nasopharynx

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Clinical Lab, Aga Khan University Hospital

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-79846-S3/2022

text: Homo sapiens

text: nasopharynx

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-80107-S9/2022

text: Homo sapiens

text: nasopharynx

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)

text: Infectious Diseases Research Laboratory, Department of Pediatrics and Child Health, Faculty of Health Sciences, Medical College, The Aga Khan University, Stadium Road, Karachi-74800, Pakistan


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-80137-S10/2022

text: Homo sapiens

text: nasopharynx

text: male

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-80417-S18/2022

text: Homo sapiens

text: nasopharynx

text: female

text: nasal swab

text: Severe acute respiratory syndrome coronavirus 2

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: The Aga Khan University

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sterile Dacron Swab

text: Pakistan: Karachi

text: hCoV-19/Pakistan/IDRL-AKU-KHI-80444-S14/2022

text: Homo sapiens

text: nasopharynx

text: female

text: nasal swab

text: Diagnostic testing

text: baseline surveillance (random sampling)


text: biological replicate 1

characteristic: Biological replicate

text: Wroclaw University of Environmental and Life Sciences

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_C1_block_1

text: 51.09 N 17.06 E

text: soil metagenome

text: Metagenome or environmental sample from soil metagenome


text: biological replicate 2

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_C2_block_1

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 3

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_C3_block_1

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 1

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_F1_block_1

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 2

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_F2_block_1

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 3

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_F3_block_1

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 1

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_G1_block_1

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 2

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_G2_block_1

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 3

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_G3_block_1

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 1

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_L1_block_1

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 2

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_L2_block_1

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 3

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_L3_block_1

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 1

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_M1_block_1

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 2

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_M2_block_1

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 3

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_M3_block_1

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 1

text: Wroclaw University of Environmental and Life Sciences

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_C1_block_2

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 2

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_C2_block_2

text: 51.09 N 17.06 E

text: soil metagenome

text: Metagenome or environmental sample from soil metagenome


text: biological replicate 3

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_C3_block_2

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 1

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_F1_block_2

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 2

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_F2_block_2

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 3

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_F3_block_2

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 1

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_G1_block_2

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 2

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_G2_block_2

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 3

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_G3_block_2

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 1

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_L1_block_2

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 2

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_L2_block_2

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 3

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_L3_block_2

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 1

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_M1_block_2

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 2

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_M2_block_2

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 3

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_M3_block_2

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 1

text: Wroclaw University of Environmental and Life Sciences

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_C1_block_3

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 2

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_C2_block_3

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 3

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_C3_block_3

text: 51.09 N 17.06 E

text: soil metagenome

text: Metagenome or environmental sample from soil metagenome


text: biological replicate 1

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_F1_block_3

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 2

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_F2_block_3

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 3

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_F3_block_3

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 1

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_G1_block_3

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 2

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_G2_block_3

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 3

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_G3_block_3

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 1

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_L1_block_3

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 2

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_L2_block_3

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 3

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_L3_block_3

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 1

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_M1_block_3

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 2

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_M2_block_3

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 3

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_M3_block_3

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 1

text: Wroclaw University of Environmental and Life Sciences

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_C1_block_4

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 2

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_C2_block_4

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 3

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_C3_block_4

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 1

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_F1_block_4

text: 51.09 N 17.06 E

text: soil metagenome

text: Metagenome or environmental sample from soil metagenome


text: biological replicate 2

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_F2_block_4

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 3

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_F3_block_4

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 1

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_G1_block_4

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 2

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_G2_block_4

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 3

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_G3_block_4

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 1

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_L1_block_4

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 2

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_L2_block_4

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 3

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_L3_block_4

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 1

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_M1_block_4

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 2

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_M2_block_4

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 3

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_M3_block_4

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 1

text: Wroclaw University of Environmental and Life Sciences

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_S1

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 2

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_S2

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 3

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_S3

text: 51.09 N 17.06 E

text: soil metagenome


text: biological replicate 4

text: live

text: Metagenome or environmental

text: Poland

text: soil

text: DNA_isolation_from_0-10cm_layer_soil_in_Solidago_experiment_S4

text: 51.09 N 17.06 E

text: soil metagenome


text: Universidad Complutense de Madrid

text: live

text: Microbe, viral or environmental

text: Spain

text: Gallus gallus

text: Laying hens

characteristic: note

text: Escherichia coli

text: organism

characteristic: strain

text: Microbe sample from Escherichia coli


characteristic: Animal ID

characteristic: External Id

text: The Roslin Institute, University of Edinburgh

characteristic: INSDC center name

text: live

text: Model organism or animal

text: Post-smolt

text: Landcatch breeding programme

text: Salmo salar

text: not collected

characteristic: sex

text: Gill

characteristic: tissue

text: Atlantic salmon gill DNA


characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

text: Post-smolt

text: Landcatch breeding programme

text: Salmo salar

text: not collected

text: Gill

text: Atlantic salmon gill DNA


text: Chinese Center for Disease Control and Prevention

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: China: Xinjiang Uygur Autonomous Region, Beitun

text: rodent

text: Bartonella tribocorum

text: tissue sample

text: Microbe sample from Bartonella tribocorum


text: Institut Pasteur

characteristic: INSDC secondary accession

text: live

text: Pathogen.cl

characteristic: SRA accession

text: CMIP

text: France

text: Homo sapiens

characteristic: host

text: monkeypox

text: pustular lesion

text: 48.52 N 2.19 E

text: Monkeypox virus

text: Pathogen: clinical or host-associated sample from Monkeypox virus


text: Institut Pasteur

text: live

text: Pathogen.cl

text: CIBU

text: France

text: Vero E6

text: monkeypox

text: Vero E6 cells

text: 48.52 N 2.19 E

text: Monkeypox virus

characteristic: organism

characteristic: title


text: University of Toronto

text: live

text: Human

characteristic: age

text: Prof. Janice Robertson, 60 Leonard Ave., 4KD481, Toronto, ON, M5T0S8

text: Fastq files were processed with CellRanger 5.0.0 count function with GRCh38-2020-A reference with the expected cells set to 6000 to produce the output filtered_feature_bc_matrix supplementary files.

text: non-neurological disease control

characteristic: disease

text: nuclear RNA

characteristic: isolate

text: Frozen orbitofrontal cortex (~50mg per sample) was dounce homogenized on ice in lysis buffer (0.32mM sucrose, 5mM CaCl2, 3mM Mg(Ac)2, 20mM Tris-HCl [pH 7.5], 0.1% Triton X-100, 0.5M EDTA [pH 8.0], 40U/mL RNase inhibitor in H2O), spun down at 800g for 10 min at 4C, then washed twice and resuspended in wash and resuspension buffer (1x PBS, 1% BSA, 0.2U/L RNase inhibitor). Resuspended nuclei were sorted by fluorescence activated cell sorting with DAPI (Roche) removing any debris and nuclei aggregates within DAPI-positive gating while aiming to capture ~6000 nuclei per sample. Library preparation was performed using either the 10X Chromium Single Cell 3 v2 or v3 platform following the manufacturer protocols. The QC of cDNA libraries was conducted on a 2100 Bioanalyzer (Agilent). The cDNA libraries were 100-bp paired end sequenced on either an Illumina NovaSeq 6000 SP XP or NovaSeq6000 S2 standard flow cell at the Princess Margaret Genomic Centre (Toronto, Ontario). Raw Illumina base call files from each sample were demultiplexed to produce FASTQ files with the cellranger mkfastq pipeline (10X Genomics). Reads were aligned to the pre-mRNA GRCh38-2020-A genome and quantified using cellranger count command on Cell Ranger v5.0.0 (10X Genomics).

text: Homo sapiens

text: female

text: brain, orbitofrontal cortex

text: Human sample from Homo sapiens


characteristic: External Id

text: University of Toronto

text: live

text: Human

text: non-neurological disease control

text: nuclear RNA

text: Homo sapiens

text: male

text: brain, orbitofrontal cortex

text: Human sample from Homo sapiens


text: University of Toronto

characteristic: INSDC center name

text: live

text: Human

text: asymptomatic mosaic C9orf72 case (no ALS no FTLD)

text: nuclear RNA

text: Homo sapiens

text: male

text: brain, orbitofrontal cortex

text: Human sample from Homo sapiens


text: University of Toronto

text: live

text: Human

text: ALS with FTLD

text: nuclear RNA

text: Homo sapiens

text: male

characteristic: sex

text: brain, orbitofrontal cortex

text: Human sample from Homo sapiens


text: University of Toronto

text: live

text: Human

text: ALS with FTLD

text: nuclear RNA

text: Homo sapiens

text: female

text: brain, orbitofrontal cortex

characteristic: tissue

text: Human sample from Homo sapiens


text: University of Toronto

characteristic: INSDC first public

text: live

text: Human

text: ALS with no FTLD

text: nuclear RNA

text: Homo sapiens

text: female

text: brain, orbitofrontal cortex

text: Human sample from Homo sapiens


text: University of Toronto

characteristic: INSDC last update

text: live

text: Human

text: ALS with no FTLD

text: nuclear RNA

text: Homo sapiens

text: male

text: brain, orbitofrontal cortex

text: Human sample from Homo sapiens


text: University of Toronto

text: live

characteristic: INSDC status

text: Human

text: non-neurological disease control

text: genomic DNA

text: Frozen orbitofrontal cortex (~50mg per sample) was dounce homogenized on ice in homogenization buffer (HB, 260mM sucrose, 30mM KCl, 10mM MgCl2, 20mM Tricine-KOH [pH 7.8], 1mM DTT, 0.5mM Spermidine, 0.15mM Spermine, 0.3% NP40, 1 tablet cOmplete Protease inhibitor [Sigma-Aldrich]) and then filtered using a 40m Flowmi cell strainer. Filtered nuclei were spun down at 500g for 5 min at 4C. Following removal of supernatant, nuclei were resuspended in 400L of HB and then mixed with 50% iodixanol (Sigma-Aldrich). The final nuclei suspension at 25% iodixanol was loaded onto a 30-40% iodixanol density gradient and then centrifuged at 3200g for 20 min at 4C. Nuclei collected from the 30-40% iodixanol interface were resuspended in HB and spun at 500g for 10 min at 4C. Supernatant was removed and the gradient purified nuclei were resuspended in diluted nuclei buffer (10X Genomics). Library preparation was performed by manufacturer instructions on the 10X Chromium Single Cell ATAC v1.1 platform. The QC of cDNA libraries was conducted on a 2100 Bioanalyzer (Agilent). The cDNA libraries were 100-bp paired end sequenced on either an Illumina NovaSeq 6000 SP XP or NovaSeq6000 S2 standard flow cell at the Princess Margaret Genomic Centre (Toronto, Ontario). Raw Illumina base call files from each sample were demultiplexed to produce FASTQ files with the cellranger-atac mkfastq pipeline (10X Genomics). Reads were aligned to the GRCh38-2020-A genome and quantified using cellranger-atac count command on Cell Ranger ATAC v2.0 (10X Genomics).

text: Homo sapiens

text: female

text: brain, orbitofrontal cortex

text: Human sample from Homo sapiens


text: University of Toronto

text: live

text: Human

characteristic: NCBI submission model

text: Fastq files were processed with CellRangerATAC 2.0.0 count function with GRCh38-2020-A-2.0.0 reference to produce the output files.

text: non-neurological disease control

text: genomic DNA

text: Homo sapiens

text: male

text: brain, orbitofrontal cortex

text: Human sample from Homo sapiens


text: University of Toronto

text: live

text: Human

characteristic: NCBI submission package

text: non-neurological disease control

text: genomic DNA

text: Homo sapiens

text: female

text: brain, orbitofrontal cortex

text: Human sample from Homo sapiens


text: University of Toronto

characteristic: INSDC secondary accession

text: live

text: Human

text: genomic DNA

text: Homo sapiens

text: male

text: brain, orbitofrontal cortex

text: Human sample from Homo sapiens


text: University of Toronto

text: live

text: Human

characteristic: SRA accession

text: ALS with FTLD

text: genomic DNA

text: Homo sapiens

text: male

text: brain, orbitofrontal cortex

text: Human sample from Homo sapiens


text: University of Toronto

text: live

text: Human

text: ALS with FTLD

text: genomic DNA

text: Homo sapiens

text: female

text: brain, orbitofrontal cortex

text: Human sample from Homo sapiens


text: University of Toronto

text: live

text: Human

text: ALS with no FTLD

text: genomic DNA

text: Homo sapiens

text: female

text: brain, orbitofrontal cortex

text: Human sample from Homo sapiens


text: University of Toronto

text: live

text: Human

text: ALS with no FTLD

text: genomic DNA

text: Homo sapiens

text: male

text: brain, orbitofrontal cortex

text: Human sample from Homo sapiens


text: Internal Medicine, Yonsei University College of Medicine

text: live

text: Generic

text: female

characteristic: Sex

text: WT

characteristic: genotype

text: Mus musculus

text: Whole lung

text: BALB/c

characteristic: strain

text: Whole lung

text: PM/OVA/Dex group

text: Particulate matter10 with ovalbumin and dexamethasone

characteristic: treatment


text: live

text: Generic

text: female

text: WT

text: Mus musculus

characteristic: organism

text: Whole lung

text: BALB/c

text: Whole lung

text: PM/OVA/CPX group

characteristic: title

text: Particulate matter10 with ovalbumin and Chitinase-1 inhibitor


characteristic: External Id

text: live

text: Generic

text: female

text: WT

text: Mus musculus

text: Whole lung

text: BALB/c

text: Whole lung

text: PM/OVA group

text: Particulate matter10 with ovalbumin


characteristic: INSDC center name

text: live

text: Generic

text: female

text: WT

text: Mus musculus

text: Whole lung

text: BALB/c

text: Whole lung

text: PM group

text: Particulate matter10


text: live

text: Generic

text: female

text: WT

text: Mus musculus

text: Whole lung

text: BALB/c

text: Whole lung

text: Control group


JMF-1909-1-0001 sample1_September

text: Joint Microbiome Facility

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Keywords: GSC:MIxS;MIMARKS:6.0

characteristic: description

text: sponge

text: shallow water

text: freshwater

text: Austria: Pichlinger See

text: Spongilla sp.

characteristic: host

text: 48.24 N 14.38 E

text: sponge metagenome

text: sample 1 September


JMF-1909-1-0002 sample2_September

text: Joint Microbiome Facility

characteristic: INSDC first public

text: live

text: MIGS/MIMS/MIMARKS.host-associated

text: MIMARKS.survey

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: sponge

text: shallow water

text: freshwater

text: Austria: Pichlinger See

text: Spongilla sp.

text: 48.24 N 14.38 E

text: sponge metagenome

text: sample 2 september


text: Zhejiang University

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: 64.09 N 21.56 W

text: Phaeodactylum tricornutum

text: biological replicate 1

characteristic: replicate

text: whole organism

text: CCAP 1055/1

text: continuous light


text: Zhejiang University

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: 64.09 N 21.57 W

text: Phaeodactylum tricornutum

text: biological replicate 2

text: whole organism

text: CCAP 1055/1

text: continuous light


text: Zhejiang University

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: 64.09 N 21.58 W

text: Phaeodactylum tricornutum

text: biological replicate 3

text: whole organism

text: CCAP 1055/1

text: continuous light


text: Zhejiang University

text: live

text: Microbe, viral or environmental

text: 64.09 N 21.59 W

text: Phaeodactylum tricornutum

text: biological replicate 1

text: whole organism

text: CCAP 1055/1

text: continuous light


text: Zhejiang University

text: live

text: Microbe, viral or environmental

text: 64.09 N 21.60 W

text: Phaeodactylum tricornutum

text: biological replicate 2

text: whole organism

text: CCAP 1055/1

text: continuous light


text: Zhejiang University

text: live

text: Microbe, viral or environmental

text: 64.09 N 21.61 W

text: Phaeodactylum tricornutum

text: biological replicate 3

text: whole organism

text: CCAP 1055/1

text: continuous light


text: Zhejiang University

text: live

text: Microbe, viral or environmental

text: 64.09 N 21.62 W

text: Phaeodactylum tricornutum

text: biological replicate 1

text: whole organism

text: CCAP 1055/1

text: continuous light


text: Zhejiang University

text: live

text: Microbe, viral or environmental

text: 64.09 N 21.63 W

text: Phaeodactylum tricornutum

text: biological replicate 2

text: whole organism

text: CCAP 1055/1

text: continuous light


text: Zhejiang University

text: live

text: Microbe, viral or environmental

text: 64.09 N 21.64 W

text: Phaeodactylum tricornutum

text: biological replicate 3

text: whole organism

text: CCAP 1055/1

text: continuous light


text: Zhejiang University

text: live

text: Microbe, viral or environmental

text: 64.09 N 21.65 W

text: Phaeodactylum tricornutum

text: biological replicate 1

text: whole organism

text: CCAP 1055/1

text: continuous light


text: Zhejiang University

text: live

text: Microbe, viral or environmental

text: 64.09 N 21.66 W

text: Phaeodactylum tricornutum

text: biological replicate 2

text: whole organism

text: CCAP 1055/1

text: continuous light


text: Zhejiang University

text: live

text: Microbe, viral or environmental

text: 64.09 N 21.67 W

text: Phaeodactylum tricornutum

text: biological replicate 3

text: whole organism

text: CCAP 1055/1

text: continuous light


text: Zhejiang University

text: live

text: Microbe, viral or environmental

text: 64.09 N 21.68 W

text: Phaeodactylum tricornutum

text: biological replicate 1

text: whole organism

text: CCAP 1055/1

text: continuous light


text: Zhejiang University

text: live

text: Microbe, viral or environmental

text: 64.09 N 21.69 W

text: Phaeodactylum tricornutum

text: biological replicate 2

text: whole organism

text: CCAP 1055/1

text: continuous light


text: Zhejiang University

text: live

text: Microbe, viral or environmental

text: 64.09 N 21.70 W

text: Phaeodactylum tricornutum

text: biological replicate 3

text: whole organism

text: CCAP 1055/1

text: continuous light


text: Zhejiang University

text: live

text: Microbe, viral or environmental

text: 64.09 N 21.71 W

text: Phaeodactylum tricornutum

text: biological replicate 1

text: whole organism

text: CCAP 1055/1

text: light dark cycle


text: Zhejiang University

text: live

text: Microbe, viral or environmental

text: 64.09 N 21.72 W

text: Phaeodactylum tricornutum

text: biological replicate 2

text: whole organism

text: CCAP 1055/1

text: light dark cycle


text: Zhejiang University

text: live

text: Microbe, viral or environmental

text: 64.09 N 21.73 W

text: Phaeodactylum tricornutum

text: biological replicate 3

text: whole organism

text: CCAP 1055/1

text: light dark cycle


text: Zhejiang University

text: live

text: Microbe, viral or environmental

text: 64.09 N 21.74 W

text: Phaeodactylum tricornutum

text: biological replicate 1

text: whole organism

text: CCAP 1055/1

text: light dark cycle


text: Zhejiang University

text: live

text: Microbe, viral or environmental

text: 64.09 N 21.75 W

text: Phaeodactylum tricornutum

text: biological replicate 2

text: whole organism

text: CCAP 1055/1

text: light dark cycle


text: Zhejiang University

text: live

text: Microbe, viral or environmental

text: 64.09 N 21.76 W

text: Phaeodactylum tricornutum

text: biological replicate 3

text: whole organism

text: CCAP 1055/1

text: light dark cycle


text: Zhejiang University

text: live

text: Microbe, viral or environmental

text: 64.09 N 21.77 W

text: Phaeodactylum tricornutum

text: biological replicate 1

text: whole organism

text: CCAP 1055/1

text: light dark cycle


text: Zhejiang University

text: live

text: Microbe, viral or environmental

text: 64.09 N 21.78 W

text: Phaeodactylum tricornutum

text: biological replicate 2

text: whole organism

text: CCAP 1055/1

text: light dark cycle


text: Zhejiang University

text: live

text: Microbe, viral or environmental

text: 64.09 N 21.79 W

text: Phaeodactylum tricornutum

text: biological replicate 3

text: whole organism

text: CCAP 1055/1

text: light dark cycle


text: Zhejiang University

text: live

text: Microbe, viral or environmental

text: 64.09 N 21.80 W

text: Phaeodactylum tricornutum

text: biological replicate 1

text: whole organism

text: CCAP 1055/1

text: light dark cycle


text: Zhejiang University

text: live

text: Microbe, viral or environmental

text: 64.09 N 21.81 W

text: Phaeodactylum tricornutum

text: biological replicate 2

text: whole organism

text: CCAP 1055/1

text: light dark cycle


text: Zhejiang University

text: live

text: Microbe, viral or environmental

text: 64.09 N 21.82 W

text: Phaeodactylum tricornutum

text: biological replicate 3

text: whole organism

text: CCAP 1055/1

text: light dark cycle


text: Zhejiang University

text: live

text: Microbe, viral or environmental

text: 64.09 N 21.83 W

text: Phaeodactylum tricornutum

text: biological replicate 1

text: whole organism

text: CCAP 1055/1

text: light dark cycle


text: Zhejiang University

text: live

text: Microbe, viral or environmental

text: 64.09 N 21.84 W

text: Phaeodactylum tricornutum

text: biological replicate 2

text: whole organism

text: CCAP 1055/1

text: light dark cycle


text: Zhejiang University

text: live

text: Microbe, viral or environmental

text: 64.09 N 21.85 W

text: Phaeodactylum tricornutum

text: biological replicate 3

text: whole organism

text: CCAP 1055/1

text: light dark cycle


text: Harbin Normal University

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: China: Heilongjiang

text: permafrost

text: soil metagenome

text: soil sample


text: Department of Cardiovascular Surgery, Union Hospital

text: live

text: Model organism or animal

characteristic: age

text: wild type primary hepatocytes with PO stimulation biological replicate 1

characteristic: isolate

text: Mus musculus

text: male

characteristic: sex

text: liver

characteristic: tissue


text: live

text: Model organism or animal

text: wild type primary hepatocytes with PO stimulation biological replicate 2

text: Mus musculus

characteristic: organism

text: male

characteristic: strain

text: liver

characteristic: title


characteristic: External Id

characteristic: INSDC center name

text: live

text: Model organism or animal

text: wild type primary hepatocytes with PO stimulation biological replicate 3

text: Mus musculus

text: male

text: liver


characteristic: INSDC first public

text: live

text: Model organism or animal

text: wild type primary hepatocytes with PO stimulation biological replicate 4

text: Mus musculus

text: male

text: liver


characteristic: INSDC last update

text: live

text: Model organism or animal

text: wild type primary hepatocytes with PO stimulation biological replicate 5

text: Mus musculus

text: male

text: liver


text: live

text: Model organism or animal

text: LAPTM5 knock out primary hepatocytes with PO stimulation biological replicate 1

text: Mus musculus

text: male

text: liver


text: live

text: Model organism or animal

text: LAPTM5 knock out primary hepatocytes with PO stimulation biological replicate 2

text: Mus musculus

text: male

text: liver


text: live

text: Model organism or animal

text: LAPTM5 knock out primary hepatocytes with PO stimulation biological replicate 3

text: Mus musculus

text: male

text: liver


text: live

text: Model organism or animal

text: LAPTM5 knock out primary hepatocytes with PO stimulation biological replicate 4

text: Mus musculus

text: male

text: liver


text: live

text: Model organism or animal

text: LAPTM5 knock out primary hepatocytes with PO stimulation biological replicate 5

text: Mus musculus

text: male

text: liver


text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.env

text: GA

text: USA:GA

text: Chicken Wings

text: Salmonella enterica

text: Salmonella enterica


text: University of Agriculture in Krakow

text: live

text: Microbe, viral or environmental

text: Germany

text: rat

characteristic: host

text: kidney

text: Leptospira interrogans

text: bacterial culture

text: Microbe sample from Leptospira interrogans


text: live

characteristic: INSDC status

text: Model organism or animal

text: Liver tissued acquired from flox mice treated with HFHC diet biological replicate 1

text: Mus musculus

text: male

text: liver


text: live

text: Model organism or animal

characteristic: NCBI submission model

text: Liver tissued acquired from flox mice treated with HFHC diet biological replicate 2

text: Mus musculus

text: male

text: liver


text: live

text: Model organism or animal

characteristic: NCBI submission package

text: Liver tissued acquired from flox mice treated with HFHC diet biological replicate 3

text: Mus musculus

text: male

text: liver


characteristic: INSDC secondary accession

text: live

text: Model organism or animal

text: Liver tissued acquired from LAPTM5-HKO mice treated with HFHC diet biological replicate 1

text: Mus musculus

text: male

text: liver


text: Department of Cardiovascular Surgery, Union Hospital

text: live

text: Model organism or animal

characteristic: SRA accession

text: Liver tissued acquired from LAPTM5-HKO mice treated with HFHC diet biological replicate 2

text: Mus musculus

text: male

text: liver


text: live

text: Model organism or animal

characteristic: age

text: Liver tissued acquired from LAPTM5-HKO mice treated with HFHC diet biological replicate 3

text: Mus musculus

text: male

text: liver


text: henan university

text: live

text: MIMS.me

characteristic: depth

text: Keywords: GSC:MIxS;MIMS:6.0

characteristic: description

characteristic: elev

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 1

characteristic: replicate

text: MIMS Environmental/Metagenome sample from fungus metagenome


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

characteristic: organism

text: replicate = biological replicate 2


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 3

characteristic: title


characteristic: External Id

text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 4


text: henan university

characteristic: INSDC center name

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 5


text: henan university

characteristic: INSDC first public

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 6


text: henan university

characteristic: INSDC last update

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 7


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 8


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 9


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 10


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 11


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 12


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 13


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 14


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 15


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 16


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 17


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 18


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 19


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 20


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 21


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 22


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 23


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 24


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 25


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 26


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 27


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 28


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 29


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 30


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 31


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 32


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 33


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 34


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 35


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 36


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 37


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 38


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 39


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 40


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 41


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 42


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 43


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 44


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 45


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 46


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 47


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 48


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 49


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 50


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 51


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 52


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 53


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 54


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 55


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 56


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 57


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 58


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 59


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 60


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 61


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 62


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 63


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 64


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 65


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 66


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 67


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 68


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 69


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 70


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 71


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago decurrens

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 72


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 73


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 74


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 75


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 76


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 77


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 78


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 79


text: henan university

text: live

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Solidago canadensis

text: soil

text: China:North

text: 34.49 N 114.18 E

text: fungus metagenome

text: replicate = biological replicate 80


text: Southern Medical University

text: live

text: Metagenome or environmental

text: reactor samples

text: bioreactor metagenome

characteristic: tmp


TMFC

text: National Research Council

text: live

characteristic: INSDC status

text: MIMS.me

text: Keywords: GSC:MIxS;MIMS:6.0

text: Agroecosistem

text: Hill

text: Agricultural soil

text: Italy: Water Research Institute, Rome

text: Anaerobic

text: 42.10294439 N 12.63591208 E

text: soil metagenome

text: MIMS Environmental/Metagenome sample from soil metagenome


text: University of California, Santa Cruz

text: live

text: Model organism or animal

characteristic: NCBI submission model

text: 8 weeks

text: House mouse

characteristic: breed

text: MLL-Af4 Lin- cell line

text: MLL-Af4 Lin- cell line

characteristic: genotype

text: Mus musculus

text: maf4_nt1xx_dmsoxxxx_zn171_mm10.ih1.uddD1.xpe.yc.star.map.trk.bam

text: female

characteristic: sex

text: hematopoietic stem and progenitor cells

characteristic: tissue

text: MLL-Af4 Lin- cell line, non-targeting sgRNA control, treated with DMSO 0.1%, replicate 1

text: DMSO

characteristic: treatment


text: University of California, Santa Cruz

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

characteristic: NCBI submission package

characteristic: SRA accession

text: 8 weeks

characteristic: age

text: House mouse

text: MLL-Af4 Lin- cell line

text: MLL-Af4 Lin- cell line

characteristic: description

text: Mus musculus

text: maf4_nt1xx_dmsoxxxx_zn172_mm10.ih1.uddD1.xpe.yc.star.map.trk.bam

text: female

text: hematopoietic stem and progenitor cells

text: MLL-Af4 Lin- cell line, non-targeting sgRNA control, treated with DMSO 0.1%, replicate 2

text: DMSO


characteristic: External Id

text: University of California, Santa Cruz

text: live

text: Model organism or animal

text: 8 weeks

text: House mouse

text: MLL-Af4 Lin- cell line

text: MLL-Af4 Lin- cell line

text: Mus musculus

characteristic: organism

text: maf4_nt1xx_dmsoxxxx_zn173_mm10.ih1.uddD1.xpe.yc.star.map.trk.bam

text: female

text: hematopoietic stem and progenitor cells

text: MLL-Af4 Lin- cell line, non-targeting sgRNA control, treated with DMSO 0.1%, replicate 3

characteristic: title

text: DMSO


text: University of California, Santa Cruz

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Model organism or animal

text: 8 weeks

text: House mouse

text: MLL-Af4 Lin- cell line

text: MLL-Af4 Lin- cell line

text: Mus musculus

text: maf4_nt1xx_mi503c02_zn174_mm10.ih1.uddD1.xpe.yc.star.map.trk.bam

text: female

text: hematopoietic stem and progenitor cells

text: MLL-Af4 Lin- cell line, non-targeting sgRNA control, treated with MI-503 0.2mM, replicate 1

text: MI-503 0.2mM


text: University of California, Santa Cruz

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

text: 8 weeks

text: House mouse

text: MLL-Af4 Lin- cell line

text: MLL-Af4 Lin- cell line

text: Mus musculus

text: maf4_nt1xx_mi503c02_zn175_mm10.ih1.uddD1.xpe.yc.star.map.trk.bam

text: female

text: hematopoietic stem and progenitor cells

text: MI-503 0.2mM


text: University of California, Santa Cruz

text: live

text: Model organism or animal

text: 8 weeks

text: House mouse

characteristic: breed

text: MLL-Af4 Lin- cell line

text: MLL-Af4 Lin- cell line

characteristic: genotype

text: Mus musculus

text: maf4_nt1xx_mi503c02_zn176_mm10.ih1.uddD1.xpe.yc.star.map.trk.bam

text: female

text: hematopoietic stem and progenitor cells

text: MLL-Af4 Lin- cell line, non-targeting sgRNA control, treated with MI-503 0.2mM, replicate 3

text: MI-503 0.2mM


text: University of California, Santa Cruz

text: live

text: Model organism or animal

text: 8 weeks

text: House mouse

text: MLL-Af4 Lin- cell line

text: MLL-Af4 Lin- cell line

text: Mus musculus

text: maf4_nt1xx_mi503c10_zn177_mm10.ih1.uddD1.xpe.yc.star.map.trk.bam

text: female

characteristic: sex

text: hematopoietic stem and progenitor cells

characteristic: tissue

text: MLL-Af4 Lin- cell line, non-targeting sgRNA control, treated with MI-503 1.0mM, replicate 1

text: MI-503 1.0mM


text: University of California, Santa Cruz

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

text: 8 weeks

text: House mouse

text: MLL-Af4 Lin- cell line

text: MLL-Af4 Lin- cell line

text: Mus musculus

text: maf4_nt1xx_mi503c10_zn178_mm10.ih1.uddD1.xpe.yc.star.map.trk.bam

text: female

text: hematopoietic stem and progenitor cells

text: MI-503 1.0mM

characteristic: treatment


text: University of California, Santa Cruz

text: live

text: Model organism or animal

characteristic: NCBI submission package

characteristic: SRA accession

text: 8 weeks

text: House mouse

text: MLL-Af4 Lin- cell line

text: MLL-Af4 Lin- cell line

text: Mus musculus

text: maf4_nt1xx_mi503c10_zn179_mm10.ih1.uddD1.xpe.yc.star.map.trk.bam

text: female

text: hematopoietic stem and progenitor cells

text: MLL-Af4 Lin- cell line, non-targeting sgRNA control, treated with MI-503 1.0mM, replicate 3

text: MI-503 1.0mM


text: University of California, Santa Cruz

text: live

text: Model organism or animal

text: 8 weeks

characteristic: age

text: House mouse

text: MLL-Af4 Lin- cell line

text: MLL-Af4 Lin- cell line

characteristic: description

text: Mus musculus

text: maf4_i3cr2_dmsoxxxx_zn181_mm10.ih1.uddD1.xpe.yc.star.map.trk.bam

text: female

text: hematopoietic stem and progenitor cells

text: MLL-Af4 Lin- cell line, IGF2BP3 knockdown, treated with DMSO 0.1%, replicate 1

text: DMSO


characteristic: External Id

text: University of California, Santa Cruz

text: live

text: Model organism or animal

text: 8 weeks

text: House mouse

text: MLL-Af4 Lin- cell line

text: MLL-Af4 Lin- cell line

text: Mus musculus

characteristic: organism

text: maf4_i3cr2_dmsoxxxx_zn182_mm10.ih1.uddD1.xpe.yc.star.map.trk.bam

text: female

text: hematopoietic stem and progenitor cells

text: MLL-Af4 Lin- cell line, IGF2BP3 knockdown, treated with DMSO 0.1%, replicate 2

text: DMSO


text: University of California, Santa Cruz

characteristic: INSDC center name

text: live

text: Model organism or animal

text: 8 weeks

text: House mouse

text: MLL-Af4 Lin- cell line

text: MLL-Af4 Lin- cell line

text: Mus musculus

text: maf4_i3cr2_dmsoxxxx_zn183_mm10.ih1.uddD1.xpe.yc.star.map.trk.bam

text: female

text: hematopoietic stem and progenitor cells

text: MLL-Af4 Lin- cell line, IGF2BP3 knockdown, treated with DMSO 0.1%, replicate 3

characteristic: title

text: DMSO


text: University of California, Santa Cruz

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Model organism or animal

text: 8 weeks

text: House mouse

text: MLL-Af4 Lin- cell line

text: MLL-Af4 Lin- cell line

text: Mus musculus

text: maf4_i3cr2_mi503c02_zn184_mm10.ih1.uddD1.xpe.yc.star.map.trk.bam

text: female

text: hematopoietic stem and progenitor cells

text: MLL-Af4 Lin- cell line, IGF2BP3 knockdown, treated with MI-503 0.2mM, replicate 1

text: MI-503 0.2mM


text: University of California, Santa Cruz

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

text: 8 weeks

text: House mouse

text: MLL-Af4 Lin- cell line

text: MLL-Af4 Lin- cell line

text: Mus musculus

text: maf4_i3cr2_mi503c02_zn185_mm10.ih1.uddD1.xpe.yc.star.map.trk.bam

text: female

text: hematopoietic stem and progenitor cells

text: MI-503 0.2mM


text: University of California, Santa Cruz

text: live

text: Model organism or animal

text: 8 weeks

text: House mouse

characteristic: breed

text: MLL-Af4 Lin- cell line

text: MLL-Af4 Lin- cell line

characteristic: genotype

text: Mus musculus

text: maf4_i3cr2_mi503c02_zn186_mm10.ih1.uddD1.xpe.yc.star.map.trk.bam

text: female

text: hematopoietic stem and progenitor cells

text: MLL-Af4 Lin- cell line, IGF2BP3 knockdown, treated with MI-503 0.2mM, replicate 3

text: MI-503 0.2mM


text: University of California, Santa Cruz

text: live

text: Model organism or animal

text: 8 weeks

text: House mouse

text: MLL-Af4 Lin- cell line

text: MLL-Af4 Lin- cell line

text: Mus musculus

text: maf4_i3cr2_mi503c10_zn187_mm10.ih1.uddD1.xpe.yc.star.map.trk.bam

text: female

characteristic: sex

text: hematopoietic stem and progenitor cells

characteristic: tissue

text: MLL-Af4 Lin- cell line, IGF2BP3 knockdown, treated with MI-503 1.0mM, replicate 1

text: MI-503 1.0mM


text: University of California, Santa Cruz

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

text: 8 weeks

text: House mouse

text: MLL-Af4 Lin- cell line

text: MLL-Af4 Lin- cell line

text: Mus musculus

text: maf4_i3cr2_mi503c10_zn188_mm10.ih1.uddD1.xpe.yc.star.map.trk.bam

text: female

text: hematopoietic stem and progenitor cells

text: MI-503 1.0mM

characteristic: treatment


text: University of California, Santa Cruz

text: live

text: Model organism or animal

characteristic: NCBI submission package

characteristic: SRA accession

text: 8 weeks

text: House mouse

text: MLL-Af4 Lin- cell line

text: MLL-Af4 Lin- cell line

text: Mus musculus

text: maf4_i3cr2_mi503c10_zn189_mm10.ih1.uddD1.xpe.yc.star.map.trk.bam

text: female

text: hematopoietic stem and progenitor cells

text: MLL-Af4 Lin- cell line, IGF2BP3 knockdown, treated with MI-503 1.0mM, replicate 3

text: MI-503 1.0mM


text: De Vlaminck Lab, Meinig School of Biomedical Engineering, Cornell University

text: live

text: Generic

characteristic: developmental stage

text: Mus musculus

text: small intestine

characteristic: strain

text: small intestine


characteristic: External Id

text: live

text: Generic

text: Mus musculus

characteristic: organism

text: mid-gut

text: mid-gut


text: China Agricultural University

characteristic: INSDC center name

text: live

text: Plant

text: Steiners Rottr Tiroter

characteristic: cultivar

text: seedling

text: Germany

text: Triticum spelta

text: leaf

text: WGS of leaf: GH115

characteristic: title


text: China Agricultural University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Plant

text: Rouguin

text: seedling

text: Germany

text: Triticum spelta

text: leaf

text: WGS of leaf: GH116


text: China Agricultural University

text: live

text: Plant

characteristic: NCBI submission model

text: seedling

text: Germany

text: Triticum spelta

text: leaf

text: WGS of leaf: GH117


text: China Agricultural University

text: live

text: Plant

text: seedling

text: Romania

text: Triticum spelta

text: leaf

text: WGS of leaf: GH118


text: China Agricultural University

text: live

text: Plant

text: seedling

text: Germany

text: Triticum spelta

text: leaf

text: WGS of leaf: GH119


text: China Agricultural University

text: live

text: Plant

text: seedling

text: Germany

text: Triticum spelta

text: leaf

text: WGS of leaf: GH120


text: China Agricultural University

text: live

text: Plant

text: seedling

text: Germany

text: Triticum spelta

text: leaf

text: WGS of leaf: GH121


text: China Agricultural University

text: live

text: Plant

text: Hercule

text: seedling

text: Italy

text: Triticum spelta

text: leaf

text: WGS of leaf: GH122


text: China Agricultural University

text: live

text: Plant

text: Rochbergers fruher Dinke

text: seedling

text: Germany

text: Triticum spelta

text: leaf

text: WGS of leaf: GH123


text: China Agricultural University

text: live

text: Plant

text: Neuegger Weisskorn

text: seedling

text: Germany

text: Triticum spelta

text: leaf

text: WGS of leaf: GH124


text: China Agricultural University

text: live

text: Plant

text: Waggershauser Hohenheimer

text: seedling

text: Germany

text: Triticum spelta

text: leaf

text: WGS of leaf: GH125


text: China Agricultural University

text: live

text: Plant

text: Schwabenkorn

text: seedling

text: Germany

text: Triticum spelta

text: leaf

text: WGS of leaf: GH126


text: China Agricultural University

text: live

text: Plant

text: Duhamelianum

text: seedling

text: Germany

text: Triticum spelta

text: leaf

text: WGS of leaf: GH127


text: China Agricultural University

text: live

text: Plant

text: seedling

text: Spain

text: Triticum spelta

text: leaf

text: WGS of leaf: GH130


text: China Agricultural University

text: live

text: Plant

text: Somiedo

text: seedling

text: Spain

text: Triticum spelta

text: leaf

text: WGS of leaf: GH131


text: China Agricultural University

text: live

text: Plant

text: seedling

text: Germany

text: Triticum spelta

text: leaf

text: WGS of leaf: GH132


text: China Agricultural University

text: live

text: Plant

text: seedling

text: Hungary

text: Triticum spelta

text: leaf

text: WGS of leaf: GH133


text: yes

characteristic: Antibiotics

text: normal

characteristic: Diet

characteristic: Donor

text: lean

characteristic: Group

text: University of Minnesota

text: live

text: Metagenome or environmental

text: male

characteristic: Sex

text: Day 7

text: USA: Minneapolis, MN

text: Mus musculus

characteristic: host

text: feces

text: 44.9847 N 93.1819 W

text: gut metagenome

characteristic: replicate

text: Metagenome or environmental sample from gut metagenome


text: yes

text: normal

text: lean

text: University of Minnesota

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

characteristic: SRA accession

text: male

text: Day 28

text: USA: Minneapolis, MN

text: Mus musculus

text: feces

text: 44.9847 N 93.1819 W

text: gut metagenome


text: yes

text: normal

characteristic: External Id

text: obese

text: University of Minnesota

characteristic: INSDC center name

text: live

text: Metagenome or environmental

text: male

text: Day 7

text: USA: Minneapolis, MN

text: Mus musculus

text: feces

text: 44.9847 N 93.1819 W

text: gut metagenome

characteristic: organism


text: yes

text: normal

text: obese

text: University of Minnesota

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: male

text: Day 28

text: USA: Minneapolis, MN

text: Mus musculus

text: feces

text: 44.9847 N 93.1819 W

text: gut metagenome

characteristic: title


text: yes

text: normal

text: abx

text: University of Minnesota

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: male

text: Day 7

text: USA: Minneapolis, MN

text: Mus musculus

text: feces

text: 44.9847 N 93.1819 W

text: gut metagenome


text: yes

characteristic: Antibiotics

text: normal

text: abx

text: University of Minnesota

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

text: male

text: Day 28

text: USA: Minneapolis, MN

text: Mus musculus

text: feces

text: 44.9847 N 93.1819 W

text: gut metagenome


text: no

text: normal

characteristic: Diet

text: control

text: University of Minnesota

text: live

text: Metagenome or environmental

text: male

text: Day 7

text: USA: Minneapolis, MN

text: Mus musculus

text: feces

text: 44.9847 N 93.1819 W

text: gut metagenome


text: no

text: normal

text: control

characteristic: Group

text: University of Minnesota

text: live

text: Metagenome or environmental

text: male

text: Day 28

text: USA: Minneapolis, MN

text: Mus musculus

text: feces

text: 44.9847 N 93.1819 W

text: gut metagenome