text: University of Washington - Seattle

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Summary: Wild-type (EPV50) V. cholerae grown in LB at 37C with 260 rpm shaking until stationary phase (OD600 of 1.5 or greater). Biological replicate C.Full: Wild-type (EPV50) and wild-type monochromosome (MCH1) variants of V. cholerae strain O1 biovar El Tor str. N16961 were struck on solid agar and grown overnight at 37 C. Three individual colonies were selected from each strain and used to inoculate 10 mL of LB media, which was grown overnight at 37C with 260 rpm shaking. The following morning, these overnight pre-cultures were back-diluted to OD600 of 0.05 in 5 mL of either LB or M9 minimal medium (1X M9 salts, 2 mM MgSO4, 0.1 mM CaCl2, 0.4% glucose, and 10 ug/mL thiamine Hcl). The same biological replicate was used to inoculate both growth conditions. Exponential phase cultures were grown to OD600 of 0.60-0.80. Stationary phase samples were grown to OD600 of 1.50 or greater. To harvest, cultures were centrifuged at 10,000 rpm for 5 mins at 25 C, and the supernatant was removed. gDNA was prepared immediately following harvest using GeneJet Genomic DNA Purification Kit (Thermo Scientific, K0721). Purified gDNA was quantified using Qubit dsDNA HS Assay Kit (Invitrogen, Q32851) and quality was assayed using a Nanodrop 2000 Spectrophotometer (Thermo Scientific, ND-2000). Whole-genome libraries were prepared from purified gDNA using Twist 96-Plex Library Prep Kit (Twist Bioscience, 104950) with dual adapters. Libraries were subsequently pooled and sequenced on Illumina NovaSeq6000 (S4) to a depth of 60,000,000 reads per sample.

text: stationary phase

text: wild type genotype

characteristic: genotype

text: LB

text: Vibrio cholerae

text: C

text: Cell culture

text: O1 biovar El Tor str. N16961

characteristic: strain

characteristic: title


status: PUBLIC

characteristic: External Id

text: University of Washington - Seattle

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

tag: attribute

text: Summary: Wild-type monochromosome (MCH1) variant of V. cholerae grown in LB at 37C with 260 rpm shaking until stationary phase (OD600 of 1.5 or greater). Biological replicate A.Full: Wild-type (EPV50) and wild-type monochromosome (MCH1) variants of V. cholerae strain O1 biovar El Tor str. N16961 were struck on solid agar and grown overnight at 37 C. Three individual colonies were selected from each strain and used to inoculate 10 mL of LB media, which was grown overnight at 37C with 260 rpm shaking. The following morning, these overnight pre-cultures were back-diluted to OD600 of 0.05 in 5 mL of either LB or M9 minimal medium (1X M9 salts, 2 mM MgSO4, 0.1 mM CaCl2, 0.4% glucose, and 10 ug/mL thiamine Hcl). The same biological replicate was used to inoculate both growth conditions. Exponential phase cultures were grown to OD600 of 0.60-0.80. Stationary phase samples were grown to OD600 of 1.50 or greater. To harvest, cultures were centrifuged at 10,000 rpm for 5 mins at 25 C, and the supernatant was removed. gDNA was prepared immediately following harvest using GeneJet Genomic DNA Purification Kit (Thermo Scientific, K0721). Purified gDNA was quantified using Qubit dsDNA HS Assay Kit (Invitrogen, Q32851) and quality was assayed using a Nanodrop 2000 Spectrophotometer (Thermo Scientific, ND-2000). Whole-genome libraries were prepared from purified gDNA using Twist 96-Plex Library Prep Kit (Twist Bioscience, 104950) with dual adapters. Libraries were subsequently pooled and sequenced on Illumina NovaSeq6000 (S4) to a depth of 60,000,000 reads per sample.

characteristic: description

text: stationary phase

characteristic: development stage

text: wild type genotype monochromosome

text: LB

characteristic: growth medium

text: Vibrio cholerae

characteristic: organism

text: A

characteristic: replicate

text: Cell culture

text: O1 biovar El Tor str. N16961

characteristic: temp


text: University of Washington - Seattle

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Summary: Wild-type monochromosome (MCH1) variant of V. cholerae grown in LB at 37C with 260 rpm shaking until stationary phase (OD600 of 1.5 or greater). Biological replicate B.Full: Wild-type (EPV50) and wild-type monochromosome (MCH1) variants of V. cholerae strain O1 biovar El Tor str. N16961 were struck on solid agar and grown overnight at 37 C. Three individual colonies were selected from each strain and used to inoculate 10 mL of LB media, which was grown overnight at 37C with 260 rpm shaking. The following morning, these overnight pre-cultures were back-diluted to OD600 of 0.05 in 5 mL of either LB or M9 minimal medium (1X M9 salts, 2 mM MgSO4, 0.1 mM CaCl2, 0.4% glucose, and 10 ug/mL thiamine Hcl). The same biological replicate was used to inoculate both growth conditions. Exponential phase cultures were grown to OD600 of 0.60-0.80. Stationary phase samples were grown to OD600 of 1.50 or greater. To harvest, cultures were centrifuged at 10,000 rpm for 5 mins at 25 C, and the supernatant was removed. gDNA was prepared immediately following harvest using GeneJet Genomic DNA Purification Kit (Thermo Scientific, K0721). Purified gDNA was quantified using Qubit dsDNA HS Assay Kit (Invitrogen, Q32851) and quality was assayed using a Nanodrop 2000 Spectrophotometer (Thermo Scientific, ND-2000). Whole-genome libraries were prepared from purified gDNA using Twist 96-Plex Library Prep Kit (Twist Bioscience, 104950) with dual adapters. Libraries were subsequently pooled and sequenced on Illumina NovaSeq6000 (S4) to a depth of 60,000,000 reads per sample.

text: stationary phase

text: wild type genotype monochromosome

text: LB

text: Vibrio cholerae

text: B

text: Cell culture

text: O1 biovar El Tor str. N16961


text: University of Washington - Seattle

text: live

text: Microbe, viral or environmental

text: Summary: Wild-type monochromosome (MCH1) variant of V. cholerae grown in LB at 37C with 260 rpm shaking until stationary phase (OD600 of 1.5 or greater). Biological replicate C.Full: Wild-type (EPV50) and wild-type monochromosome (MCH1) variants of V. cholerae strain O1 biovar El Tor str. N16961 were struck on solid agar and grown overnight at 37 C. Three individual colonies were selected from each strain and used to inoculate 10 mL of LB media, which was grown overnight at 37C with 260 rpm shaking. The following morning, these overnight pre-cultures were back-diluted to OD600 of 0.05 in 5 mL of either LB or M9 minimal medium (1X M9 salts, 2 mM MgSO4, 0.1 mM CaCl2, 0.4% glucose, and 10 ug/mL thiamine Hcl). The same biological replicate was used to inoculate both growth conditions. Exponential phase cultures were grown to OD600 of 0.60-0.80. Stationary phase samples were grown to OD600 of 1.50 or greater. To harvest, cultures were centrifuged at 10,000 rpm for 5 mins at 25 C, and the supernatant was removed. gDNA was prepared immediately following harvest using GeneJet Genomic DNA Purification Kit (Thermo Scientific, K0721). Purified gDNA was quantified using Qubit dsDNA HS Assay Kit (Invitrogen, Q32851) and quality was assayed using a Nanodrop 2000 Spectrophotometer (Thermo Scientific, ND-2000). Whole-genome libraries were prepared from purified gDNA using Twist 96-Plex Library Prep Kit (Twist Bioscience, 104950) with dual adapters. Libraries were subsequently pooled and sequenced on Illumina NovaSeq6000 (S4) to a depth of 60,000,000 reads per sample.

text: stationary phase

text: wild type genotype monochromosome

characteristic: genotype

text: LB

text: Vibrio cholerae

text: C

text: Cell culture

text: O1 biovar El Tor str. N16961

characteristic: strain


characteristic: External Id

text: University of Washington - Seattle

text: live

text: Microbe, viral or environmental

text: Summary: Wild-type (EPV50) V. cholerae grown in M9 w/ 0.4% glucose and 10 ug/mL thiamine HCl at 37C with 260 rpm shaking until stationary phase (OD600 of 1.5 or greater). Biological replicate A.Full: Wild-type (EPV50) and wild-type monochromosome (MCH1) variants of V. cholerae strain O1 biovar El Tor str. N16961 were struck on solid agar and grown overnight at 37 C. Three individual colonies were selected from each strain and used to inoculate 10 mL of LB media, which was grown overnight at 37C with 260 rpm shaking. The following morning, these overnight pre-cultures were back-diluted to OD600 of 0.05 in 5 mL of either LB or M9 minimal medium (1X M9 salts, 2 mM MgSO4, 0.1 mM CaCl2, 0.4% glucose, and 10 ug/mL thiamine Hcl). The same biological replicate was used to inoculate both growth conditions. Exponential phase cultures were grown to OD600 of 0.60-0.80. Stationary phase samples were grown to OD600 of 1.50 or greater. To harvest, cultures were centrifuged at 10,000 rpm for 5 mins at 25 C, and the supernatant was removed. gDNA was prepared immediately following harvest using GeneJet Genomic DNA Purification Kit (Thermo Scientific, K0721). Purified gDNA was quantified using Qubit dsDNA HS Assay Kit (Invitrogen, Q32851) and quality was assayed using a Nanodrop 2000 Spectrophotometer (Thermo Scientific, ND-2000). Whole-genome libraries were prepared from purified gDNA using Twist 96-Plex Library Prep Kit (Twist Bioscience, 104950) with dual adapters. Libraries were subsequently pooled and sequenced on Illumina NovaSeq6000 (S4) to a depth of 60,000,000 reads per sample.

text: stationary phase

text: wild type genotype

text: M9 minimal medium w/ 0.4% glucose and 10 ug/mL thiamine HCl

text: Vibrio cholerae

text: A

text: Cell culture

text: O1 biovar El Tor str. N16961

characteristic: title


text: University of Washington - Seattle

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

text: Summary: Wild-type (EPV50) V. cholerae grown in M9 w/ 0.4% glucose and 10 ug/mL thiamine HCl at 37C with 260 rpm shaking until stationary phase (OD600 of 1.5 or greater). Biological replicate B.Full: Wild-type (EPV50) and wild-type monochromosome (MCH1) variants of V. cholerae strain O1 biovar El Tor str. N16961 were struck on solid agar and grown overnight at 37 C. Three individual colonies were selected from each strain and used to inoculate 10 mL of LB media, which was grown overnight at 37C with 260 rpm shaking. The following morning, these overnight pre-cultures were back-diluted to OD600 of 0.05 in 5 mL of either LB or M9 minimal medium (1X M9 salts, 2 mM MgSO4, 0.1 mM CaCl2, 0.4% glucose, and 10 ug/mL thiamine Hcl). The same biological replicate was used to inoculate both growth conditions. Exponential phase cultures were grown to OD600 of 0.60-0.80. Stationary phase samples were grown to OD600 of 1.50 or greater. To harvest, cultures were centrifuged at 10,000 rpm for 5 mins at 25 C, and the supernatant was removed. gDNA was prepared immediately following harvest using GeneJet Genomic DNA Purification Kit (Thermo Scientific, K0721). Purified gDNA was quantified using Qubit dsDNA HS Assay Kit (Invitrogen, Q32851) and quality was assayed using a Nanodrop 2000 Spectrophotometer (Thermo Scientific, ND-2000). Whole-genome libraries were prepared from purified gDNA using Twist 96-Plex Library Prep Kit (Twist Bioscience, 104950) with dual adapters. Libraries were subsequently pooled and sequenced on Illumina NovaSeq6000 (S4) to a depth of 60,000,000 reads per sample.

text: stationary phase

text: wild type genotype

text: Vibrio cholerae

text: B

text: Cell culture

text: O1 biovar El Tor str. N16961


text: University of Washington - Seattle

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: Summary: Wild-type (EPV50) V. cholerae grown in M9 w/ 0.4% glucose and 10 ug/mL thiamine HCl at 37C with 260 rpm shaking until stationary phase (OD600 of 1.5 or greater). Biological replicate C.Full: Wild-type (EPV50) and wild-type monochromosome (MCH1) variants of V. cholerae strain O1 biovar El Tor str. N16961 were struck on solid agar and grown overnight at 37 C. Three individual colonies were selected from each strain and used to inoculate 10 mL of LB media, which was grown overnight at 37C with 260 rpm shaking. The following morning, these overnight pre-cultures were back-diluted to OD600 of 0.05 in 5 mL of either LB or M9 minimal medium (1X M9 salts, 2 mM MgSO4, 0.1 mM CaCl2, 0.4% glucose, and 10 ug/mL thiamine Hcl). The same biological replicate was used to inoculate both growth conditions. Exponential phase cultures were grown to OD600 of 0.60-0.80. Stationary phase samples were grown to OD600 of 1.50 or greater. To harvest, cultures were centrifuged at 10,000 rpm for 5 mins at 25 C, and the supernatant was removed. gDNA was prepared immediately following harvest using GeneJet Genomic DNA Purification Kit (Thermo Scientific, K0721). Purified gDNA was quantified using Qubit dsDNA HS Assay Kit (Invitrogen, Q32851) and quality was assayed using a Nanodrop 2000 Spectrophotometer (Thermo Scientific, ND-2000). Whole-genome libraries were prepared from purified gDNA using Twist 96-Plex Library Prep Kit (Twist Bioscience, 104950) with dual adapters. Libraries were subsequently pooled and sequenced on Illumina NovaSeq6000 (S4) to a depth of 60,000,000 reads per sample.

text: stationary phase

text: wild type genotype

text: Vibrio cholerae

text: C

text: Cell culture

text: O1 biovar El Tor str. N16961


text: University of Washington - Seattle

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: SRA accession

text: Summary: Wild-type monochromosome (MCH1) variant of V. cholerae grown in M9 w/ 0.4% glucose and 10 ug/mL thiamine HCl at 37C with 260 rpm shaking until stationary phase (OD600 of 1.5 or greater). Biological replicate A.Full: Wild-type (EPV50) and wild-type monochromosome (MCH1) variants of V. cholerae strain O1 biovar El Tor str. N16961 were struck on solid agar and grown overnight at 37 C. Three individual colonies were selected from each strain and used to inoculate 10 mL of LB media, which was grown overnight at 37C with 260 rpm shaking. The following morning, these overnight pre-cultures were back-diluted to OD600 of 0.05 in 5 mL of either LB or M9 minimal medium (1X M9 salts, 2 mM MgSO4, 0.1 mM CaCl2, 0.4% glucose, and 10 ug/mL thiamine Hcl). The same biological replicate was used to inoculate both growth conditions. Exponential phase cultures were grown to OD600 of 0.60-0.80. Stationary phase samples were grown to OD600 of 1.50 or greater. To harvest, cultures were centrifuged at 10,000 rpm for 5 mins at 25 C, and the supernatant was removed. gDNA was prepared immediately following harvest using GeneJet Genomic DNA Purification Kit (Thermo Scientific, K0721). Purified gDNA was quantified using Qubit dsDNA HS Assay Kit (Invitrogen, Q32851) and quality was assayed using a Nanodrop 2000 Spectrophotometer (Thermo Scientific, ND-2000). Whole-genome libraries were prepared from purified gDNA using Twist 96-Plex Library Prep Kit (Twist Bioscience, 104950) with dual adapters. Libraries were subsequently pooled and sequenced on Illumina NovaSeq6000 (S4) to a depth of 60,000,000 reads per sample.

text: stationary phase

text: wild type genotype monochromosome

text: Vibrio cholerae

text: A

text: Cell culture

text: O1 biovar El Tor str. N16961


text: University of Washington - Seattle

text: live

text: Microbe, viral or environmental

text: Summary: Wild-type monochromosome (MCH1) variant of V. cholerae grown in M9 w/ 0.4% glucose and 10 ug/mL thiamine HCl at 37C with 260 rpm shaking until stationary phase (OD600 of 1.5 or greater). Biological replicate B.Full: Wild-type (EPV50) and wild-type monochromosome (MCH1) variants of V. cholerae strain O1 biovar El Tor str. N16961 were struck on solid agar and grown overnight at 37 C. Three individual colonies were selected from each strain and used to inoculate 10 mL of LB media, which was grown overnight at 37C with 260 rpm shaking. The following morning, these overnight pre-cultures were back-diluted to OD600 of 0.05 in 5 mL of either LB or M9 minimal medium (1X M9 salts, 2 mM MgSO4, 0.1 mM CaCl2, 0.4% glucose, and 10 ug/mL thiamine Hcl). The same biological replicate was used to inoculate both growth conditions. Exponential phase cultures were grown to OD600 of 0.60-0.80. Stationary phase samples were grown to OD600 of 1.50 or greater. To harvest, cultures were centrifuged at 10,000 rpm for 5 mins at 25 C, and the supernatant was removed. gDNA was prepared immediately following harvest using GeneJet Genomic DNA Purification Kit (Thermo Scientific, K0721). Purified gDNA was quantified using Qubit dsDNA HS Assay Kit (Invitrogen, Q32851) and quality was assayed using a Nanodrop 2000 Spectrophotometer (Thermo Scientific, ND-2000). Whole-genome libraries were prepared from purified gDNA using Twist 96-Plex Library Prep Kit (Twist Bioscience, 104950) with dual adapters. Libraries were subsequently pooled and sequenced on Illumina NovaSeq6000 (S4) to a depth of 60,000,000 reads per sample.

characteristic: description

text: stationary phase

characteristic: development stage

text: wild type genotype monochromosome

text: Vibrio cholerae

text: B

text: Cell culture

text: O1 biovar El Tor str. N16961


text: University of Washington - Seattle

text: live

text: Microbe, viral or environmental

text: Summary: Wild-type monochromosome (MCH1) variant of V. cholerae grown in M9 w/ 0.4% glucose and 10 ug/mL thiamine HCl at 37C with 260 rpm shaking until stationary phase (OD600 of 1.5 or greater). Biological replicate C.Full: Wild-type (EPV50) and wild-type monochromosome (MCH1) variants of V. cholerae strain O1 biovar El Tor str. N16961 were struck on solid agar and grown overnight at 37 C. Three individual colonies were selected from each strain and used to inoculate 10 mL of LB media, which was grown overnight at 37C with 260 rpm shaking. The following morning, these overnight pre-cultures were back-diluted to OD600 of 0.05 in 5 mL of either LB or M9 minimal medium (1X M9 salts, 2 mM MgSO4, 0.1 mM CaCl2, 0.4% glucose, and 10 ug/mL thiamine Hcl). The same biological replicate was used to inoculate both growth conditions. Exponential phase cultures were grown to OD600 of 0.60-0.80. Stationary phase samples were grown to OD600 of 1.50 or greater. To harvest, cultures were centrifuged at 10,000 rpm for 5 mins at 25 C, and the supernatant was removed. gDNA was prepared immediately following harvest using GeneJet Genomic DNA Purification Kit (Thermo Scientific, K0721). Purified gDNA was quantified using Qubit dsDNA HS Assay Kit (Invitrogen, Q32851) and quality was assayed using a Nanodrop 2000 Spectrophotometer (Thermo Scientific, ND-2000). Whole-genome libraries were prepared from purified gDNA using Twist 96-Plex Library Prep Kit (Twist Bioscience, 104950) with dual adapters. Libraries were subsequently pooled and sequenced on Illumina NovaSeq6000 (S4) to a depth of 60,000,000 reads per sample.

text: stationary phase

text: wild type genotype monochromosome

characteristic: growth medium

text: Vibrio cholerae

characteristic: organism

text: C

text: Cell culture

text: O1 biovar El Tor str. N16961


text: University of Washington - Seattle

text: live

text: Microbe, viral or environmental

text: Summary: Wild-type (EPV50) V. cholerae grown in LB at 37C with 260 rpm shaking until exponential phase (OD600 of 0.60-0.80). Biological replicate A.Full: Wild-type (EPV50) and wild-type monochromosome (MCH1) variants of V. cholerae strain O1 biovar El Tor str. N16961 were struck on solid agar and grown overnight at 37 C. Three individual colonies were selected from each strain and used to inoculate 10 mL of LB media, which was grown overnight at 37C with 260 rpm shaking. The following morning, these overnight pre-cultures were back-diluted to OD600 of 0.05 in 5 mL of either LB or M9 minimal medium (1X M9 salts, 2 mM MgSO4, 0.1 mM CaCl2, 0.4% glucose, and 10 ug/mL thiamine Hcl). The same biological replicate was used to inoculate both growth conditions. Exponential phase cultures were grown to OD600 of 0.60-0.80. Stationary phase samples were grown to OD600 of 1.50 or greater. To harvest, cultures were centrifuged at 10,000 rpm for 5 mins at 25 C, and the supernatant was removed. gDNA was prepared immediately following harvest using GeneJet Genomic DNA Purification Kit (Thermo Scientific, K0721). Purified gDNA was quantified using Qubit dsDNA HS Assay Kit (Invitrogen, Q32851) and quality was assayed using a Nanodrop 2000 Spectrophotometer (Thermo Scientific, ND-2000). Whole-genome libraries were prepared from purified gDNA using Twist 96-Plex Library Prep Kit (Twist Bioscience, 104950) with dual adapters. Libraries were subsequently pooled and sequenced on Illumina NovaSeq6000 (S4) to a depth of 60,000,000 reads per sample.

text: exponential phase

text: wild type genotype

text: LB

text: Vibrio cholerae

text: A

characteristic: replicate

text: Cell culture

text: O1 biovar El Tor str. N16961

characteristic: temp


text: University of Washington - Seattle

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Summary: Wild-type (EPV50) V. cholerae grown in LB at 37C with 260 rpm shaking until exponential phase (OD600 of 0.60-0.80). Biological replicate B.Full: Wild-type (EPV50) and wild-type monochromosome (MCH1) variants of V. cholerae strain O1 biovar El Tor str. N16961 were struck on solid agar and grown overnight at 37 C. Three individual colonies were selected from each strain and used to inoculate 10 mL of LB media, which was grown overnight at 37C with 260 rpm shaking. The following morning, these overnight pre-cultures were back-diluted to OD600 of 0.05 in 5 mL of either LB or M9 minimal medium (1X M9 salts, 2 mM MgSO4, 0.1 mM CaCl2, 0.4% glucose, and 10 ug/mL thiamine Hcl). The same biological replicate was used to inoculate both growth conditions. Exponential phase cultures were grown to OD600 of 0.60-0.80. Stationary phase samples were grown to OD600 of 1.50 or greater. To harvest, cultures were centrifuged at 10,000 rpm for 5 mins at 25 C, and the supernatant was removed. gDNA was prepared immediately following harvest using GeneJet Genomic DNA Purification Kit (Thermo Scientific, K0721). Purified gDNA was quantified using Qubit dsDNA HS Assay Kit (Invitrogen, Q32851) and quality was assayed using a Nanodrop 2000 Spectrophotometer (Thermo Scientific, ND-2000). Whole-genome libraries were prepared from purified gDNA using Twist 96-Plex Library Prep Kit (Twist Bioscience, 104950) with dual adapters. Libraries were subsequently pooled and sequenced on Illumina NovaSeq6000 (S4) to a depth of 60,000,000 reads per sample.

text: exponential phase

text: wild type genotype

text: LB

text: Vibrio cholerae

text: B

text: Cell culture

text: O1 biovar El Tor str. N16961


text: University of Washington - Seattle

text: live

text: Microbe, viral or environmental

text: Summary: Wild-type (EPV50) V. cholerae grown in LB at 37C with 260 rpm shaking until exponential phase (OD600 of 0.60-0.80). Biological replicate C.Full: Wild-type (EPV50) and wild-type monochromosome (MCH1) variants of V. cholerae strain O1 biovar El Tor str. N16961 were struck on solid agar and grown overnight at 37 C. Three individual colonies were selected from each strain and used to inoculate 10 mL of LB media, which was grown overnight at 37C with 260 rpm shaking. The following morning, these overnight pre-cultures were back-diluted to OD600 of 0.05 in 5 mL of either LB or M9 minimal medium (1X M9 salts, 2 mM MgSO4, 0.1 mM CaCl2, 0.4% glucose, and 10 ug/mL thiamine Hcl). The same biological replicate was used to inoculate both growth conditions. Exponential phase cultures were grown to OD600 of 0.60-0.80. Stationary phase samples were grown to OD600 of 1.50 or greater. To harvest, cultures were centrifuged at 10,000 rpm for 5 mins at 25 C, and the supernatant was removed. gDNA was prepared immediately following harvest using GeneJet Genomic DNA Purification Kit (Thermo Scientific, K0721). Purified gDNA was quantified using Qubit dsDNA HS Assay Kit (Invitrogen, Q32851) and quality was assayed using a Nanodrop 2000 Spectrophotometer (Thermo Scientific, ND-2000). Whole-genome libraries were prepared from purified gDNA using Twist 96-Plex Library Prep Kit (Twist Bioscience, 104950) with dual adapters. Libraries were subsequently pooled and sequenced on Illumina NovaSeq6000 (S4) to a depth of 60,000,000 reads per sample.

text: exponential phase

text: wild type genotype

characteristic: genotype

text: LB

text: Vibrio cholerae

text: C

text: Cell culture

text: O1 biovar El Tor str. N16961

characteristic: strain


characteristic: External Id

text: University of Washington - Seattle

text: live

text: Microbe, viral or environmental

text: Summary: Wild-type monochromosome (MCH1) variant of V. cholerae grown in LB at 37C with 260 rpm shaking until exponential phase (OD600 of 0.60-0.80). Biological replicate A.Full: Wild-type (EPV50) and wild-type monochromosome (MCH1) variants of V. cholerae strain O1 biovar El Tor str. N16961 were struck on solid agar and grown overnight at 37 C. Three individual colonies were selected from each strain and used to inoculate 10 mL of LB media, which was grown overnight at 37C with 260 rpm shaking. The following morning, these overnight pre-cultures were back-diluted to OD600 of 0.05 in 5 mL of either LB or M9 minimal medium (1X M9 salts, 2 mM MgSO4, 0.1 mM CaCl2, 0.4% glucose, and 10 ug/mL thiamine Hcl). The same biological replicate was used to inoculate both growth conditions. Exponential phase cultures were grown to OD600 of 0.60-0.80. Stationary phase samples were grown to OD600 of 1.50 or greater. To harvest, cultures were centrifuged at 10,000 rpm for 5 mins at 25 C, and the supernatant was removed. gDNA was prepared immediately following harvest using GeneJet Genomic DNA Purification Kit (Thermo Scientific, K0721). Purified gDNA was quantified using Qubit dsDNA HS Assay Kit (Invitrogen, Q32851) and quality was assayed using a Nanodrop 2000 Spectrophotometer (Thermo Scientific, ND-2000). Whole-genome libraries were prepared from purified gDNA using Twist 96-Plex Library Prep Kit (Twist Bioscience, 104950) with dual adapters. Libraries were subsequently pooled and sequenced on Illumina NovaSeq6000 (S4) to a depth of 60,000,000 reads per sample.

text: exponential phase

text: wild type genotype monochromosome

text: LB

text: Vibrio cholerae

text: A

text: Cell culture

text: O1 biovar El Tor str. N16961

characteristic: title


text: University of Washington - Seattle

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

text: Summary: Wild-type monochromosome (MCH1) variant of V. cholerae grown in LB at 37C with 260 rpm shaking until exponential phase (OD600 of 0.60-0.80). Biological replicate B.Full: Wild-type (EPV50) and wild-type monochromosome (MCH1) variants of V. cholerae strain O1 biovar El Tor str. N16961 were struck on solid agar and grown overnight at 37 C. Three individual colonies were selected from each strain and used to inoculate 10 mL of LB media, which was grown overnight at 37C with 260 rpm shaking. The following morning, these overnight pre-cultures were back-diluted to OD600 of 0.05 in 5 mL of either LB or M9 minimal medium (1X M9 salts, 2 mM MgSO4, 0.1 mM CaCl2, 0.4% glucose, and 10 ug/mL thiamine Hcl). The same biological replicate was used to inoculate both growth conditions. Exponential phase cultures were grown to OD600 of 0.60-0.80. Stationary phase samples were grown to OD600 of 1.50 or greater. To harvest, cultures were centrifuged at 10,000 rpm for 5 mins at 25 C, and the supernatant was removed. gDNA was prepared immediately following harvest using GeneJet Genomic DNA Purification Kit (Thermo Scientific, K0721). Purified gDNA was quantified using Qubit dsDNA HS Assay Kit (Invitrogen, Q32851) and quality was assayed using a Nanodrop 2000 Spectrophotometer (Thermo Scientific, ND-2000). Whole-genome libraries were prepared from purified gDNA using Twist 96-Plex Library Prep Kit (Twist Bioscience, 104950) with dual adapters. Libraries were subsequently pooled and sequenced on Illumina NovaSeq6000 (S4) to a depth of 60,000,000 reads per sample.

text: exponential phase

text: wild type genotype monochromosome

text: LB

text: Vibrio cholerae

text: B

text: Cell culture

text: O1 biovar El Tor str. N16961


text: University of Washington - Seattle

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: Summary: Wild-type monochromosome (MCH1) variant of V. cholerae grown in LB at 37C with 260 rpm shaking until exponential phase (OD600 of 0.60-0.80). Biological replicate C.Full: Wild-type (EPV50) and wild-type monochromosome (MCH1) variants of V. cholerae strain O1 biovar El Tor str. N16961 were struck on solid agar and grown overnight at 37 C. Three individual colonies were selected from each strain and used to inoculate 10 mL of LB media, which was grown overnight at 37C with 260 rpm shaking. The following morning, these overnight pre-cultures were back-diluted to OD600 of 0.05 in 5 mL of either LB or M9 minimal medium (1X M9 salts, 2 mM MgSO4, 0.1 mM CaCl2, 0.4% glucose, and 10 ug/mL thiamine Hcl). The same biological replicate was used to inoculate both growth conditions. Exponential phase cultures were grown to OD600 of 0.60-0.80. Stationary phase samples were grown to OD600 of 1.50 or greater. To harvest, cultures were centrifuged at 10,000 rpm for 5 mins at 25 C, and the supernatant was removed. gDNA was prepared immediately following harvest using GeneJet Genomic DNA Purification Kit (Thermo Scientific, K0721). Purified gDNA was quantified using Qubit dsDNA HS Assay Kit (Invitrogen, Q32851) and quality was assayed using a Nanodrop 2000 Spectrophotometer (Thermo Scientific, ND-2000). Whole-genome libraries were prepared from purified gDNA using Twist 96-Plex Library Prep Kit (Twist Bioscience, 104950) with dual adapters. Libraries were subsequently pooled and sequenced on Illumina NovaSeq6000 (S4) to a depth of 60,000,000 reads per sample.

text: exponential phase

text: wild type genotype monochromosome

text: LB

text: Vibrio cholerae

text: C

text: Cell culture

text: O1 biovar El Tor str. N16961


text: University of Washington - Seattle

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

characteristic: SRA accession

text: Summary: Wild-type (EPV50) V. cholerae grown in M9 w/ 0.4% glucose and 10 ug/mL thiamine HCl at 37C with 260 rpm shaking until exponential phase (OD600 of 0.60-0.80). Biological replicate A.Full: Wild-type (EPV50) and wild-type monochromosome (MCH1) variants of V. cholerae strain O1 biovar El Tor str. N16961 were struck on solid agar and grown overnight at 37 C. Three individual colonies were selected from each strain and used to inoculate 10 mL of LB media, which was grown overnight at 37C with 260 rpm shaking. The following morning, these overnight pre-cultures were back-diluted to OD600 of 0.05 in 5 mL of either LB or M9 minimal medium (1X M9 salts, 2 mM MgSO4, 0.1 mM CaCl2, 0.4% glucose, and 10 ug/mL thiamine Hcl). The same biological replicate was used to inoculate both growth conditions. Exponential phase cultures were grown to OD600 of 0.60-0.80. Stationary phase samples were grown to OD600 of 1.50 or greater. To harvest, cultures were centrifuged at 10,000 rpm for 5 mins at 25 C, and the supernatant was removed. gDNA was prepared immediately following harvest using GeneJet Genomic DNA Purification Kit (Thermo Scientific, K0721). Purified gDNA was quantified using Qubit dsDNA HS Assay Kit (Invitrogen, Q32851) and quality was assayed using a Nanodrop 2000 Spectrophotometer (Thermo Scientific, ND-2000). Whole-genome libraries were prepared from purified gDNA using Twist 96-Plex Library Prep Kit (Twist Bioscience, 104950) with dual adapters. Libraries were subsequently pooled and sequenced on Illumina NovaSeq6000 (S4) to a depth of 60,000,000 reads per sample.

text: exponential phase

text: wild type genotype

text: Vibrio cholerae

text: A

text: Cell culture

text: O1 biovar El Tor str. N16961


text: University of Washington - Seattle

text: live

text: Microbe, viral or environmental

text: Summary: Wild-type (EPV50) V. cholerae grown in M9 w/ 0.4% glucose and 10 ug/mL thiamine HCl at 37C with 260 rpm shaking until exponential phase (OD600 of 0.60-0.80). Biological replicate B.Full: Wild-type (EPV50) and wild-type monochromosome (MCH1) variants of V. cholerae strain O1 biovar El Tor str. N16961 were struck on solid agar and grown overnight at 37 C. Three individual colonies were selected from each strain and used to inoculate 10 mL of LB media, which was grown overnight at 37C with 260 rpm shaking. The following morning, these overnight pre-cultures were back-diluted to OD600 of 0.05 in 5 mL of either LB or M9 minimal medium (1X M9 salts, 2 mM MgSO4, 0.1 mM CaCl2, 0.4% glucose, and 10 ug/mL thiamine Hcl). The same biological replicate was used to inoculate both growth conditions. Exponential phase cultures were grown to OD600 of 0.60-0.80. Stationary phase samples were grown to OD600 of 1.50 or greater. To harvest, cultures were centrifuged at 10,000 rpm for 5 mins at 25 C, and the supernatant was removed. gDNA was prepared immediately following harvest using GeneJet Genomic DNA Purification Kit (Thermo Scientific, K0721). Purified gDNA was quantified using Qubit dsDNA HS Assay Kit (Invitrogen, Q32851) and quality was assayed using a Nanodrop 2000 Spectrophotometer (Thermo Scientific, ND-2000). Whole-genome libraries were prepared from purified gDNA using Twist 96-Plex Library Prep Kit (Twist Bioscience, 104950) with dual adapters. Libraries were subsequently pooled and sequenced on Illumina NovaSeq6000 (S4) to a depth of 60,000,000 reads per sample.

characteristic: description

text: exponential phase

characteristic: development stage

text: wild type genotype

text: Vibrio cholerae

text: B

text: Cell culture

text: O1 biovar El Tor str. N16961


text: University of Washington - Seattle

text: live

text: Microbe, viral or environmental

text: Summary: Wild-type (EPV50) V. cholerae grown in M9 w/ 0.4% glucose and 10 ug/mL thiamine HCl at 37C with 260 rpm shaking until exponential phase (OD600 of 0.60-0.80). Biological replicate C.Full: Wild-type (EPV50) and wild-type monochromosome (MCH1) variants of V. cholerae strain O1 biovar El Tor str. N16961 were struck on solid agar and grown overnight at 37 C. Three individual colonies were selected from each strain and used to inoculate 10 mL of LB media, which was grown overnight at 37C with 260 rpm shaking. The following morning, these overnight pre-cultures were back-diluted to OD600 of 0.05 in 5 mL of either LB or M9 minimal medium (1X M9 salts, 2 mM MgSO4, 0.1 mM CaCl2, 0.4% glucose, and 10 ug/mL thiamine Hcl). The same biological replicate was used to inoculate both growth conditions. Exponential phase cultures were grown to OD600 of 0.60-0.80. Stationary phase samples were grown to OD600 of 1.50 or greater. To harvest, cultures were centrifuged at 10,000 rpm for 5 mins at 25 C, and the supernatant was removed. gDNA was prepared immediately following harvest using GeneJet Genomic DNA Purification Kit (Thermo Scientific, K0721). Purified gDNA was quantified using Qubit dsDNA HS Assay Kit (Invitrogen, Q32851) and quality was assayed using a Nanodrop 2000 Spectrophotometer (Thermo Scientific, ND-2000). Whole-genome libraries were prepared from purified gDNA using Twist 96-Plex Library Prep Kit (Twist Bioscience, 104950) with dual adapters. Libraries were subsequently pooled and sequenced on Illumina NovaSeq6000 (S4) to a depth of 60,000,000 reads per sample.

text: exponential phase

text: wild type genotype

characteristic: growth medium

text: Vibrio cholerae

characteristic: organism

text: C

text: Cell culture

text: O1 biovar El Tor str. N16961


text: University of Washington - Seattle

text: live

text: Microbe, viral or environmental

text: Summary: Wild-type monochromosome (MCH1) variant of V. cholerae grown in M9 w/ 0.4% glucose and 10 ug/mL thiamine HCl at 37C with 260 rpm shaking until exponential phase (OD600 of 0.60-0.80). Biological replicate A.Full: Wild-type (EPV50) and wild-type monochromosome (MCH1) variants of V. cholerae strain O1 biovar El Tor str. N16961 were struck on solid agar and grown overnight at 37 C. Three individual colonies were selected from each strain and used to inoculate 10 mL of LB media, which was grown overnight at 37C with 260 rpm shaking. The following morning, these overnight pre-cultures were back-diluted to OD600 of 0.05 in 5 mL of either LB or M9 minimal medium (1X M9 salts, 2 mM MgSO4, 0.1 mM CaCl2, 0.4% glucose, and 10 ug/mL thiamine Hcl). The same biological replicate was used to inoculate both growth conditions. Exponential phase cultures were grown to OD600 of 0.60-0.80. Stationary phase samples were grown to OD600 of 1.50 or greater. To harvest, cultures were centrifuged at 10,000 rpm for 5 mins at 25 C, and the supernatant was removed. gDNA was prepared immediately following harvest using GeneJet Genomic DNA Purification Kit (Thermo Scientific, K0721). Purified gDNA was quantified using Qubit dsDNA HS Assay Kit (Invitrogen, Q32851) and quality was assayed using a Nanodrop 2000 Spectrophotometer (Thermo Scientific, ND-2000). Whole-genome libraries were prepared from purified gDNA using Twist 96-Plex Library Prep Kit (Twist Bioscience, 104950) with dual adapters. Libraries were subsequently pooled and sequenced on Illumina NovaSeq6000 (S4) to a depth of 60,000,000 reads per sample.

text: exponential phase

text: wild type genotype monochromosome

text: Vibrio cholerae

text: A

characteristic: replicate

text: Cell culture

text: O1 biovar El Tor str. N16961

characteristic: temp


text: University of Washington - Seattle

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: Summary: Wild-type monochromosome (MCH1) variant of V. cholerae grown in M9 w/ 0.4% glucose and 10 ug/mL thiamine HCl at 37C with 260 rpm shaking until exponential phase (OD600 of 0.60-0.80). Biological replicate B.Full: Wild-type (EPV50) and wild-type monochromosome (MCH1) variants of V. cholerae strain O1 biovar El Tor str. N16961 were struck on solid agar and grown overnight at 37 C. Three individual colonies were selected from each strain and used to inoculate 10 mL of LB media, which was grown overnight at 37C with 260 rpm shaking. The following morning, these overnight pre-cultures were back-diluted to OD600 of 0.05 in 5 mL of either LB or M9 minimal medium (1X M9 salts, 2 mM MgSO4, 0.1 mM CaCl2, 0.4% glucose, and 10 ug/mL thiamine Hcl). The same biological replicate was used to inoculate both growth conditions. Exponential phase cultures were grown to OD600 of 0.60-0.80. Stationary phase samples were grown to OD600 of 1.50 or greater. To harvest, cultures were centrifuged at 10,000 rpm for 5 mins at 25 C, and the supernatant was removed. gDNA was prepared immediately following harvest using GeneJet Genomic DNA Purification Kit (Thermo Scientific, K0721). Purified gDNA was quantified using Qubit dsDNA HS Assay Kit (Invitrogen, Q32851) and quality was assayed using a Nanodrop 2000 Spectrophotometer (Thermo Scientific, ND-2000). Whole-genome libraries were prepared from purified gDNA using Twist 96-Plex Library Prep Kit (Twist Bioscience, 104950) with dual adapters. Libraries were subsequently pooled and sequenced on Illumina NovaSeq6000 (S4) to a depth of 60,000,000 reads per sample.

text: exponential phase

text: wild type genotype monochromosome

text: Vibrio cholerae

text: B

text: Cell culture

text: O1 biovar El Tor str. N16961


text: University of Washington - Seattle

text: live

text: Microbe, viral or environmental

text: Summary: Wild-type monochromosome (MCH1) variant of V. cholerae grown in M9 w/ 0.4% glucose and 10 ug/mL thiamine HCl at 37C with 260 rpm shaking until exponential phase (OD600 of 0.60-0.80). Biological replicate C.Full: Wild-type (EPV50) and wild-type monochromosome (MCH1) variants of V. cholerae strain O1 biovar El Tor str. N16961 were struck on solid agar and grown overnight at 37 C. Three individual colonies were selected from each strain and used to inoculate 10 mL of LB media, which was grown overnight at 37C with 260 rpm shaking. The following morning, these overnight pre-cultures were back-diluted to OD600 of 0.05 in 5 mL of either LB or M9 minimal medium (1X M9 salts, 2 mM MgSO4, 0.1 mM CaCl2, 0.4% glucose, and 10 ug/mL thiamine Hcl). The same biological replicate was used to inoculate both growth conditions. Exponential phase cultures were grown to OD600 of 0.60-0.80. Stationary phase samples were grown to OD600 of 1.50 or greater. To harvest, cultures were centrifuged at 10,000 rpm for 5 mins at 25 C, and the supernatant was removed. gDNA was prepared immediately following harvest using GeneJet Genomic DNA Purification Kit (Thermo Scientific, K0721). Purified gDNA was quantified using Qubit dsDNA HS Assay Kit (Invitrogen, Q32851) and quality was assayed using a Nanodrop 2000 Spectrophotometer (Thermo Scientific, ND-2000). Whole-genome libraries were prepared from purified gDNA using Twist 96-Plex Library Prep Kit (Twist Bioscience, 104950) with dual adapters. Libraries were subsequently pooled and sequenced on Illumina NovaSeq6000 (S4) to a depth of 60,000,000 reads per sample.

text: exponential phase

text: wild type genotype monochromosome

characteristic: genotype

text: M9 minimal medium w/ 0.4% glucose and 10 ug/mL thiamine HCl

text: Vibrio cholerae

text: C

text: Cell culture

text: O1 biovar El Tor str. N16961

characteristic: strain


characteristic: External Id

text: McGill Unviersity

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: human

text: human

text: fecal sample

text: Canada: Montreal

text: Homo sapiens

characteristic: host

text: 45.5 N 73.58 W

text: human gut metagenome

text: Epos

text: MIMARKS Survey related sample from human gut metagenome

characteristic: title

text: EdU

characteristic: treatment


text: McGill Unviersity

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: MIGS/MIMS/MIMARKS.human-gut

characteristic: NCBI submission model

text: MIMARKS.survey

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: human

text: human

text: fecal sample

text: Canada: Montreal

text: Homo sapiens

text: 45.5 N 73.58 W

text: human gut metagenome

text: Eneg

text: EdU


text: McGill Unviersity

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

characteristic: NCBI submission package

characteristic: SRA accession

text: Keywords: GSC:MIxS;MIMARKS:6.0

characteristic: description

text: human

text: human

text: fecal sample

text: Canada: Montreal

text: Homo sapiens

text: 45.5 N 73.58 W

text: human gut metagenome

text: Whole

text: EdU


MCSheath

text: McGill Unviersity

text: live

text: MIGS/MIMS/MIMARKS.human-gut

text: MIMARKS.survey

text: Keywords: GSC:MIxS;MIMARKS:6.0

text: cell sorter

text: cell sorter

text: sheath fluid

text: Canada: Montreal

text: cell sorter

text: 45.5 N 73.58 W

text: metagenome

characteristic: organism

characteristic: replicate

text: Sheath

text: MIMARKS Survey related sample from metagenome

text: Sheath


text: Utah Public Health Laboratory Infectious Disease submission group

characteristic: INSDC first public

text: live

text: SARS-CoV-2: wastewater surveillance

text: USA: Utah

text: wastewater

text: wastewater metagenome

text: public health surveillance community-level

text: characterize diversity of lineages and mutations across entire genome

text: UPHL

text: SARS-CoV-2: wastewater surveillance sample from wastewater metagenome

text: no

text: Promega wastewater large volume TNA capture kit,Promega automated TNA kit

text: raw wastewater

text: wastewater treatment plant

text: composite

text: UT

text: copies/L wastewater

text: N1 & N2 combined

text: no

text: IDT Research Use Only Kit (https://www.idtdna.com/pages/landing/coronavirus-research-reagents/cdc-assays)


characteristic: INSDC last update

text: live

text: SARS-CoV-2: wastewater surveillance

text: USA: Utah

text: wastewater

text: wastewater metagenome

text: UPHL

text: no

text: raw wastewater

text: wastewater treatment plant

text: grab

text: UT

text: copies/L wastewater

text: N1 & N2 combined

text: no


text: live

text: SARS-CoV-2: wastewater surveillance

text: USA: Utah

text: wastewater

text: wastewater metagenome

text: UPHL

text: no

text: raw wastewater

text: wastewater treatment plant

text: composite

text: UT

text: N1 & N2 combined

text: no


text: Columbia University

text: live

text: Microbe, viral or environmental

text: USA

text: Laboratory Strain, NEB

text: Escherichia coli BL21(DE3)

text: Cell culture

text: Microbe sample from Escherichia coli BL21(DE3)


text: Elaine Fuchs, The Rockefeller University

text: live

text: Generic

text: K14rtTA; TRE-myc-Sox9; TRE-ARID1a

characteristic: genotype

text: male

characteristic: mouse sex

characteristic: mouse strain

text: Mus musculus

text: keratinocytes extracted from mouse back skin


name: WGBS-seq of Triticum turgidum ssp. dicoccoides

characteristic: External Id

text: Institute of Crop Science, Chinese Academy of Agricultural Sciences

text: live

text: Plant

text: Zavitan

characteristic: cultivar

text: seeding

text: China: Beijing

text: Triticum dicoccoides

text: young leaves

characteristic: tissue

text: Plant sample from Triticum dicoccoides


name: CENH3-ChIPseq of Triticum turgidum ssp. dicoccoides (rep1)

characteristic: INSDC center name

text: live

text: Plant

text: Zavitan

text: seeding

text: China: Beijing

text: Triticum dicoccoides

text: biological replicate 1

text: young leaves

text: Plant sample from Triticum dicoccoides

characteristic: title


name: CENH3-ChIPseq of Triticum turgidum ssp. dicoccoides (rep2)

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Plant

text: Zavitan

text: seeding

text: China: Beijing

text: Triticum dicoccoides

text: biological replicate 2

text: young leaves

text: Plant sample from Triticum dicoccoides


CENH3-ChIPseq of Triticum aestivum

text: live

text: Plant

characteristic: NCBI submission model

characteristic: NCBI submission package

text: CS

text: seeding

text: China: Beijing

text: Triticum aestivum

text: young leaves

text: Plant sample from Triticum aestivum


name: CENH3-ChIPseq of Triticum aestivum (rep2)

text: live

text: Plant

characteristic: SRA accession

text: seeding

text: China: Beijing

text: Triticum aestivum

text: biological replicate 2

text: young leaves

text: Plant sample from Triticum aestivum


text: Zhejiang University

text: live

text: Pathogen.cl

text: The First Affiliated Hospital of Gannan Medical College of Jiangxi Province

text: China: Jiangxi

text: Homo sapiens

characteristic: host

text: bloodstream infection

text: physical

text: 29.41 N 117.54 E

text: Escherichia coli

characteristic: organism

characteristic: strain

text: Pathogen: clinical or host-associated sample from Escherichia coli, Klebsiella pneumoniae, Enterobacter cloacae


text: Guangdong Academic Science

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Model organism or animal

text: mot collected

characteristic: age

text: Turtle farm

characteristic: ecotype

characteristic: isolate

text: Chrysemys picta

text: tail muscle


characteristic: External Id

text: Guangdong Academic Science

text: live

text: Model organism or animal

text: mot collected

text: Turtle farm

text: Platysternon megacephalum

text: tail muscle


text: College of Public Health, Zhengzhou University

text: live

text: Generic

text: wild type

characteristic: genotype

text: Caenorhabditis elegans

text: whole individual

characteristic: strain background

text: Caenorhabditis elegans-high glucose induce with naringin-rep3

text: high glucose induce with naringin

characteristic: treatment


characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Generic

text: wild type

text: Caenorhabditis elegans

text: whole individual

text: Caenorhabditis elegans-high glucose induce with naringin-rep2

characteristic: title

text: high glucose induce with naringin


text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: wild type

text: Caenorhabditis elegans

text: whole individual

text: Caenorhabditis elegans-high glucose induce with naringin-rep1

text: high glucose induce with naringin


text: live

text: Generic

characteristic: SRA accession

text: wild type

text: Caenorhabditis elegans

characteristic: organism

text: whole individual

text: Caenorhabditis elegans-high glucose induce with DMSO-rep3

text: high glucose induce with DMSO


characteristic: INSDC first public

text: live

text: Generic

text: wild type

text: Caenorhabditis elegans

text: whole individual

text: Caenorhabditis elegans-high glucose induce with DMSO-rep2

text: high glucose induce with DMSO


characteristic: INSDC last update

text: live

text: Generic

text: wild type

text: Caenorhabditis elegans

text: whole individual

text: Caenorhabditis elegans-high glucose induce with DMSO-rep1

text: high glucose induce with DMSO


text: live

text: Generic

text: wild type

text: Caenorhabditis elegans

text: whole individual

text: Caenorhabditis elegans-high glucose induce-rep3

text: high glucose induce


text: live

text: Generic

text: wild type

text: Caenorhabditis elegans

text: whole individual

text: Caenorhabditis elegans-high glucose induce-rep2

text: high glucose induce


text: live

text: Generic

text: wild type

text: Caenorhabditis elegans

text: whole individual

text: Caenorhabditis elegans-high glucose induce-rep1

text: high glucose induce


text: live

text: Generic

text: wild type

text: Caenorhabditis elegans

text: whole individual

text: Caenorhabditis elegans-control-rep3

text: untreated


text: live

text: Generic

text: wild type

text: Caenorhabditis elegans

text: whole individual

text: Caenorhabditis elegans-control-rep2

text: untreated


text: live

text: Generic

text: wild type

text: Caenorhabditis elegans

text: whole individual

text: Caenorhabditis elegans-control-rep1

text: untreated


text: Zhejiang University

text: live

text: Pathogen.cl

text: Huaihe Hospital of Henan University

text: China: Henan

text: Homo sapiens

characteristic: host

text: bloodstream infection

text: physical

text: 34 N 114 E

text: Escherichia coli

characteristic: strain

text: Pathogen: clinical or host-associated sample from Escherichia coli


text: live

text: Generic

text: wild type

text: Caenorhabditis elegans

text: whole individual

text: Caenorhabditis elegans-high glucose induce with naringin-rep3 [miRNA-seq]

text: high glucose induce with naringin


text: live

text: Generic

text: wild type

text: Caenorhabditis elegans

text: whole individual

text: Caenorhabditis elegans-high glucose induce with naringin-rep2 [miRNA-seq]

text: high glucose induce with naringin


text: live

text: Generic

text: wild type

text: Caenorhabditis elegans

text: whole individual

text: Caenorhabditis elegans-high glucose induce with naringin-rep1 [miRNA-seq]

text: high glucose induce with naringin


text: live

text: Generic

text: wild type

text: Caenorhabditis elegans

text: whole individual

text: Caenorhabditis elegans-high glucose induce with DMSO-rep3 [miRNA-seq]

text: high glucose induce with DMSO


text: live

text: Generic

text: wild type

text: Caenorhabditis elegans

text: whole individual

text: Caenorhabditis elegans-high glucose induce with DMSO-rep2 [miRNA-seq]

text: high glucose induce with DMSO


text: live

text: Generic

text: wild type

text: Caenorhabditis elegans

text: whole individual

text: Caenorhabditis elegans-high glucose induce with DMSO-rep1 [miRNA-seq]

text: high glucose induce with DMSO


text: College of Public Health, Zhengzhou University

text: live

text: Generic

text: wild type

text: Caenorhabditis elegans

text: whole individual

text: Caenorhabditis elegans-high glucose induce-rep3 [miRNA-seq]

text: high glucose induce


text: live

text: Generic

text: wild type

text: Caenorhabditis elegans

text: whole individual

text: Caenorhabditis elegans-high glucose induce-rep2 [miRNA-seq]

text: high glucose induce


text: live

text: Generic

text: wild type

text: Caenorhabditis elegans

text: whole individual

text: Caenorhabditis elegans-high glucose induce-rep1 [miRNA-seq]

text: high glucose induce


text: live

text: Generic

text: wild type

text: Caenorhabditis elegans

text: whole individual

text: Caenorhabditis elegans-control-rep3 [miRNA-seq]

text: untreated


text: live

text: Generic

text: wild type

text: Caenorhabditis elegans

text: whole individual

text: Caenorhabditis elegans-control-rep2 [miRNA-seq]

text: untreated


text: live

text: Generic

text: wild type

text: Caenorhabditis elegans

text: whole individual

text: Caenorhabditis elegans-control-rep1 [miRNA-seq]

text: untreated


S-END

text: Changsha University of Science & Technology

text: live

text: Metagenome or environmental

text: reactor sample

text: sludge metagenome

text: sludge


text: CIBNOR

text: live

text: MIMARKS.survey

characteristic: depth

text: mock community of 25 eukaryotes in equimolar concentration

characteristic: description

text: seawater metagenome

text: mock community of eukaryotes

text: seawater

text: Mexico

text: 24.749 N 110.674 W

text: seawater metagenome

text: MIMS Environmental/Metagenome sample from seawater metagenome


characteristic: External Id

text: CIBNOR

text: live

text: MIMARKS.survey

text: negative control pool of field, extraction and PCR steps

text: seawater metagenome

text: negative control

text: seawater

text: Mexico

text: 24.749 N 110.674 W

text: seawater metagenome


text: CIBNOR

text: live

text: MIMARKS.survey

text: Puerto Lobos

text: marine

text: rocky reef

text: seawater

text: Mexico

text: 30.222 N 112.966 W

text: seawater metagenome

characteristic: temp

text: Metagenome or environmental sample from seawater metagenome


text: CIBNOR

text: live

text: MIMARKS.survey

text: Puerto Libertad

text: marine

text: rocky reef

text: seawater

text: Mexico

text: 29.903 N 112.729 W

text: seawater metagenome


text: CIBNOR

text: live

text: MIMARKS.survey

text: San Luis Gonzaga

text: marine

text: rocky reef

text: seawater

text: Mexico

text: 29.806 N 114.373 W

text: seawater metagenome


text: CIBNOR

text: live

text: MIMARKS.survey

text: I. Angel de la Guarda NO

text: marine

text: rocky reef

text: seawater

text: Mexico

text: 29.555 N 113.559 W

text: seawater metagenome


text: CIBNOR

text: live

text: MIMARKS.survey

text: I. Angel de la Guarda NE

text: marine

text: rocky reef

text: seawater

text: Mexico

text: 29.552 N 113.514 W

text: seawater metagenome


text: CIBNOR

text: live

text: MIMARKS.survey

text: I. Patos

text: marine

text: rocky reef

text: seawater

text: Mexico

text: 29.266 N 112.464 W

text: seawater metagenome


text: CIBNOR

text: live

text: MIMARKS.survey

text: I. San Lorenzo

text: marine

text: rocky reef

text: seawater

text: Mexico

text: 28.585 N 112.759 W

text: seawater metagenome


text: CIBNOR

text: live

text: MIMARKS.survey

text: I. San Pedro Martir

text: marine

text: rocky reef

text: seawater

text: Mexico

text: 28.382 N 112.296 W

text: seawater metagenome


text: CIBNOR

text: live

text: MIMARKS.survey

text: I. San Pedro Nolasco

text: marine

text: rocky reef

text: seawater

text: Mexico

text: 27.966 N 111.371 W

text: seawater metagenome


text: CIBNOR

text: live

text: MIMARKS.survey

text: I. Tortuga

text: marine

text: rocky reef

text: seawater

text: Mexico

text: 27.431 N 111.862 W

text: seawater metagenome


text: CIBNOR

text: live

text: MIMARKS.survey

text: I. San Marcos

text: marine

text: rocky reef

text: seawater

text: Mexico

text: 27.260 N 112.089 W

text: seawater metagenome


text: CIBNOR

text: live

text: MIMARKS.survey

text: Punta Pulpito

text: marine

text: rocky reef

text: seawater

text: Mexico

text: 26.515 N 111.443 W

text: seawater metagenome


text: CIBNOR

text: live

text: MIMARKS.survey

text: I. Carmen

text: marine

text: rocky reef

text: seawater

text: Mexico

text: 26.017 N 111.169 W

text: seawater metagenome


text: CIBNOR

text: live

text: MIMARKS.survey

text: I.Danzante

text: marine

text: rocky reef

text: seawater

text: Mexico

text: 25.813 N 111.255 W

text: seawater metagenome


text: CIBNOR

text: live

text: MIMARKS.survey

text: I. Monserrat

text: marine

text: rocky reef

text: seawater

text: Mexico

text: 25.744 N 111.049 W

text: seawater metagenome


text: CIBNOR

text: live

text: MIMARKS.survey

text: I. Catalana

text: marine

text: rocky reef

text: seawater

text: Mexico

text: 25.715 N 110.776 W

text: seawater metagenome


text: CIBNOR

text: live

text: MIMARKS.survey

text: I. San Mateo

text: marine

text: rocky reef

text: seawater

text: Mexico

text: 25.379 N 110.993 W

text: seawater metagenome


text: CIBNOR

text: live

text: MIMARKS.survey

text: I. Santa Cruz

text: marine

text: rocky reef

text: seawater

text: Mexico

text: 25.313 N 110.689 W

text: seawater metagenome


text: CIBNOR

text: live

text: MIMARKS.survey

text: I. San Diego

text: marine

text: rocky reef

text: seawater

text: Mexico

text: 25.204 N 110.695 W

text: seawater metagenome


text: CIBNOR

text: live

text: MIMARKS.survey

text: El Portugues

text: marine

text: rocky reef

text: seawater

text: Mexico

text: 24.749 N 110.674 W

text: seawater metagenome


text: Zhejiang University

text: live

text: Pathogen.cl

text: Huangshan People's Hospital, Anhui Province

text: China: Anhui

text: Homo sapiens

text: bloodstream infection

text: physical

text: 29.41 N 114.54 E

text: Escherichia coli

text: Pathogen: clinical or host-associated sample from Escherichia coli


text: Zhejiang University

text: live

text: Pathogen.cl

text: The First Affiliated Hospital of Nanchang University, Jiangxi Province

text: China: Jiangxi

text: Homo sapiens

text: bloodstream infection

text: physical

text: 29.41 N 117.54 E

text: Escherichia coli


text: University of Miami

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

text: Hawaii

characteristic: ecotype

text: coral reef

text: coral reef

text: coral reef

text: USA:Oahu

text: 21.55512432 N 157.84986829 W

text: Acanthurus triostegus

text: MIGS Eukaryotic sample from Acanthurus triostegus


text: University of Miami

characteristic: INSDC center name

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

text: Hawaii

text: coral reef

text: coral reef

text: coral reef

text: USA:Oahu

text: 21.45355 N 157.80324 W

text: Acanthurus triostegus


text: University of Miami

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

text: Hawaii

text: coral reef

text: coral reef

text: coral reef

text: USA:Oahu

text: 21.41316063 N 157.77706241 W

text: Acanthurus triostegus


text: University of Miami

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

text: Hawaii

text: coral reef

text: coral reef

text: coral reef

text: USA:Oahu

text: 21.40552777 N 157.72475 W

text: Acanthurus triostegus


text: University of Miami

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

text: Hawaii

text: coral reef

text: coral reef

text: coral reef

text: USA:Oahu

text: 21.40552777 N 157.72477 W

text: Acanthurus triostegus


text: University of Miami

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

text: Hawaii

text: coral reef

text: coral reef

text: coral reef

text: USA:Oahu

text: 21.319881 N 157.669482 W

text: Acanthurus triostegus


text: University of Miami

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

text: Hawaii

text: coral reef

text: coral reef

text: coral reef

text: USA:Oahu

text: 21.321921 N 157.672626 W

text: Acanthurus triostegus


text: University of Miami

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

text: Hawaii

text: coral reef

text: coral reef

text: coral reef

text: USA:Oahu

text: 21.256241 N 157.795926 W

text: Acanthurus triostegus


text: University of Miami

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

text: Hawaii

text: coral reef

text: coral reef

text: coral reef

text: USA:Oahu

text: 21.26677 N 157.711515 W

text: Acanthurus triostegus


text: University of Miami

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

text: Hawaii

text: coral reef

text: coral reef

text: coral reef

text: USA:Oahu

text: 21.434453 N 157.792620 W

text: Acanthurus triostegus


text: University of Miami

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

text: Hawaii

text: coral reef

text: coral reef

text: coral reef

text: USA:Oahu

text: 21.2825194 N 157.8492176 W

text: Acanthurus triostegus


text: University of Miami

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

text: Hawaii

text: coral reef

text: coral reef

text: coral reef

text: USA:Oahu

text: 21.299917 N 157.883768 W

text: Acanthurus triostegus


text: University of Miami

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

text: Hawaii

text: coral reef

text: coral reef

text: coral reef

text: USA:Oahu

text: 21.261247 N 157.712520 W

text: Acanthurus triostegus


text: University of Miami

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

text: Hawaii

text: coral reef

text: coral reef

text: coral reef

text: USA:Oahu

text: 21.300279 N 158.047797 W

text: Acanthurus triostegus


text: University of Miami

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

text: Hawaii

text: coral reef

text: coral reef

text: coral reef

text: USA:Oahu

text: 21.352110 N 158.131331 W

text: Acanthurus triostegus


text: University of Miami

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

text: Hawaii

text: coral reef

text: coral reef

text: coral reef

text: USA:Oahu

text: 21.373136 N 158.141967 W

text: Acanthurus triostegus


text: University of Miami

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

text: Hawaii

text: coral reef

text: coral reef

text: coral reef

text: USA:Oahu

text: 21.477040 N 158.224223 W

text: Acanthurus triostegus


text: University of Miami

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

text: Hawaii

text: coral reef

text: coral reef

text: coral reef

text: USA:Oahu

text: 21.542777 N 158.240257 W

text: Acanthurus triostegus


text: University of Miami

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

text: Hawaii

text: coral reef

text: coral reef

text: coral reef

text: USA:Oahu

text: 21.555287 N 158.252689 W

text: Acanthurus triostegus


text: University of Miami

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

text: Hawaii

text: coral reef

text: coral reef

text: coral reef

text: USA:Oahu

text: 21.27070784 N 157.71435731 W

text: Acanthurus triostegus


text: University of Miami

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

text: Hawaii

text: coral reef

text: coral reef

text: coral reef

text: USA:Oahu

text: 21.59025670 N 158.11760423 W

text: Acanthurus triostegus


text: University of Miami

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

text: Hawaii

text: coral reef

text: coral reef

text: coral reef

text: USA:Oahu

text: 21.468501 N 157.771241 W

text: Acanthurus triostegus


text: University of Miami

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

text: Hawaii

text: coral reef

text: coral reef

text: coral reef

text: USA:Oahu

text: 21.481802 N 157.788859 W

text: Acanthurus triostegus


text: University of Miami

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

text: Hawaii

text: coral reef

text: coral reef

text: coral reef

text: USA:Oahu

text: 21.693796 N 158.020734 W

text: Acanthurus triostegus


text: University of Miami

text: live

text: MIGS.eu

text: Keywords: GSC:MIxS;MIGS:6.0

text: Hawaii

text: coral reef

text: coral reef

text: coral reef

text: USA:Oahu

text: 21.622158 N 158.083312 W

text: Acanthurus triostegus


text: Biotia

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mirmus

text: USA: New York

text: Homo sapiens

characteristic: isolate

text: saliva

text: Biotia

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: Biotia

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: Mirmus

text: USA: New York

text: Homo sapiens

text: saliva

text: Severe acute respiratory syndrome coronavirus 2

text: Biotia

characteristic: title


text: Zhejiang University

text: live

text: Pathogen.cl

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Affiliated Hospital of Jining Medical College, Shandong Province

text: China: Shandong

text: Homo sapiens

text: bloodstream infection

text: physical

text: 35 N 119 E

text: Escherichia coli


text: Zhejiang University

text: live

text: Pathogen.cl

text: Medicine School of Xi'an Jiaotong University

text: China: Xian

text: Homo sapiens

text: bloodstream infection

text: physical

text: 34 N 108 E

text: Escherichia coli

characteristic: organism


text: Sichuan Agricultural University

characteristic: INSDC first public

text: live

text: Model organism or animal

characteristic: SRA accession

characteristic: age

text: Wadi sheep

characteristic: breed

text: Ovis aries

text: biological replicate 1

characteristic: replicate

text: not determined

characteristic: sex

text: rumen

characteristic: tissue


characteristic: External Id

text: Sichuan Agricultural University

characteristic: INSDC last update

text: live

text: Model organism or animal

text: Wadi sheep

text: Ovis aries

text: biological replicate 2

text: not determined

text: rumen


text: Sichuan Agricultural University

characteristic: INSDC center name

text: live

text: Model organism or animal

text: Wadi sheep

text: Ovis aries

text: biological replicate 3

text: not determined

text: rumen


text: Sichuan Agricultural University

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

text: Wadi sheep

text: Ovis aries

text: biological replicate 4

text: not determined

text: rumen


text: Sichuan Agricultural University

text: live

text: Model organism or animal

text: Wadi sheep

text: Ovis aries

text: biological replicate 5

text: not determined

text: rumen


text: Sichuan Agricultural University

text: live

text: Model organism or animal

text: Wadi sheep

text: Ovis aries

text: biological replicate 6

text: not determined

text: rumen


text: Sichuan Agricultural University

text: live

text: Model organism or animal

text: Wadi sheep

text: Ovis aries

text: biological replicate 7

text: not determined

text: rumen


text: Sichuan Agricultural University

text: live

text: Model organism or animal

text: Wadi sheep

text: Ovis aries

text: biological replicate 8

text: male

text: rumen


text: Sichuan Agricultural University

text: live

text: Model organism or animal

text: Wadi sheep

text: Ovis aries

text: biological replicate 9

text: male

text: rumen


text: Sichuan Agricultural University

text: live

text: Model organism or animal

text: Wadi sheep

text: Ovis aries

text: biological replicate 10

text: male

text: rumen


text: Sichuan Agricultural University

text: live

text: Model organism or animal

text: Wadi sheep

text: Ovis aries

text: biological replicate 11

text: male

text: rumen


text: Sichuan Agricultural University

text: live

text: Model organism or animal

text: Wadi sheep

text: Ovis aries

text: biological replicate 12

text: male

text: rumen


text: Sichuan Agricultural University

text: live

text: Model organism or animal

text: Wadi sheep

text: Ovis aries

text: biological replicate 13

text: male

text: rumen


text: Sichuan Agricultural University

text: live

text: Model organism or animal

text: Wadi sheep

text: Ovis aries

text: biological replicate 14

text: male

text: rumen


text: Sichuan Agricultural University

text: live

text: Model organism or animal

text: Wadi sheep

text: Ovis aries

text: biological replicate 15

text: male

text: rumen


text: Sichuan Agricultural University

text: live

text: Model organism or animal

text: Wadi sheep

text: Ovis aries

text: biological replicate 16

text: male

text: rumen


text: Sichuan Agricultural University

text: live

text: Model organism or animal

text: Wadi sheep

text: Ovis aries

text: biological replicate 17

text: male

text: rumen


text: Sichuan Agricultural University

text: live

text: Model organism or animal

text: Chengdu Grey goat

text: Capra hircus

text: biological replicate 18

text: not determined

text: rumen


text: Sichuan Agricultural University

text: live

text: Model organism or animal

text: Chengdu Grey goat

text: Capra hircus

text: biological replicate 19

text: not determined

text: rumen


text: Sichuan Agricultural University

text: live

text: Model organism or animal

text: Chengdu Grey goat

text: Capra hircus

text: biological replicate 20

text: not determined

text: rumen


text: Sichuan Agricultural University

text: live

text: Model organism or animal

text: Chengdu Grey goat

text: Capra hircus

text: biological replicate 21

text: not determined

text: rumen


text: Sichuan Agricultural University

text: live

text: Model organism or animal

text: Chengdu Grey goat

text: Capra hircus

text: biological replicate 22

text: not determined

text: rumen


text: Sichuan Agricultural University

text: live

text: Model organism or animal

text: Chengdu Grey goat

text: Capra hircus

text: biological replicate 23

text: not determined

text: rumen


text: Sichuan Agricultural University

text: live

text: Model organism or animal

text: Chengdu Grey goat

text: Capra hircus

text: biological replicate 24

text: not determined

text: rumen


text: Sichuan Agricultural University

text: live

text: Model organism or animal

text: Chengdu Grey goat

text: Capra hircus

text: biological replicate 25

text: male

text: rumen


text: Sichuan Agricultural University

text: live

text: Model organism or animal

text: Chengdu Grey goat

text: Capra hircus

text: biological replicate 26

text: male

text: rumen


text: Sichuan Agricultural University

text: live

text: Model organism or animal

text: Chengdu Grey goat

text: Capra hircus

text: biological replicate 27

text: male

text: rumen


text: Sichuan Agricultural University

text: live

text: Model organism or animal

text: Chengdu Grey goat

text: Capra hircus

text: biological replicate 28

text: male

text: rumen


text: Sichuan Agricultural University

text: live

text: Model organism or animal

text: Chengdu Grey goat

text: Capra hircus

text: biological replicate 29

text: male

text: rumen


text: Sichuan Agricultural University

text: live

text: Model organism or animal

text: Chengdu Grey goat

text: Capra hircus

text: biological replicate 30

text: male

text: rumen


text: Sichuan Agricultural University

text: live

text: Model organism or animal

text: Chengdu Grey goat

text: Capra hircus

text: biological replicate 31

text: male

text: rumen


text: Sichuan Agricultural University

text: live

text: Model organism or animal

text: Chengdu Grey goat

text: Capra hircus

text: biological replicate 32

text: male

text: rumen


text: Sichuan Agricultural University

text: live

text: Model organism or animal

text: Chengdu Grey goat

text: Capra hircus

text: biological replicate 33

text: male

text: rumen


text: Sichuan Agricultural University

text: live

text: Model organism or animal

text: Chengdu Grey goat

text: Capra hircus

text: biological replicate 34

text: male

text: rumen


Symbiont of Conchocele bisecta

text: Institute of Oceanology, Chinese Academy of Sciences

text: live

text: MIMAG.host-associated

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: description

text: marine

text: hydrothermal vents

text: bivalve

characteristic: environmental-sample

text: China:the East China Sea

text: Conchocele bisecta

characteristic: host

characteristic: isolate

text: gill

text: mollusc metagenome

characteristic: metagenome-source

characteristic: metagenomic

text: Candidatus Thiodubiliella sp.

text: metagenomic assembly

characteristic: sample-type

text: Metagenome-assembled Genome sample from symbiont of Conchocele bisecta

type: derived-from


text: shihezi university

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: macrophage

text: Logarithmic growth phase

text: Normal cells-Sample parallel 1

text: Mus musculus

characteristic: organism

text: male

text: Tumor ascites

characteristic: title

text: Normal cells

characteristic: treatment


characteristic: External Id

text: shihezi university

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Model organism or animal

characteristic: age

text: macrophage

text: Logarithmic growth phase

text: Normal cells-Sample parallel 2

text: Mus musculus

text: male

characteristic: sex

text: Tumor ascites

characteristic: tissue

text: Normal cells


text: shihezi university

characteristic: INSDC secondary accession

text: live

text: Model organism or animal

text: macrophage

text: Logarithmic growth phase

text: Normal cells-Sample parallel 3

characteristic: isolate

text: Mus musculus

text: male

text: Tumor ascites

text: Normal cells


text: shihezi university

text: live

text: Model organism or animal

text: macrophage

text: Logarithmic growth phase

text: Cells exposed to BDE-47-Sample parallel 1

text: Mus musculus

text: male

text: Tumor ascites

text: Cells exposed to BDE-47


text: shihezi university

text: live

text: Model organism or animal

text: macrophage

text: Logarithmic growth phase

text: Cells exposed to BDE-47-Sample parallel 2

text: Mus musculus

text: male

text: Tumor ascites

text: Cells exposed to BDE-47


text: Sichuan Agricultural University

text: live

text: Metagenome or environmental

text: China: Ya'an, Sichuan Province

text: 29.98 N 102.98 E

text: soil metagenome

text: Metagenome or environmental sample from soil metagenome


text: Jilin Academy of Agricultural Science

text: live

text: Metagenome or environmental

text: not collected

text: China: changchun

text: rat

characteristic: host

text: 43.826125 N 125.290861 E

text: rat gut metagenome

text: replicate = biological replicate 1

characteristic: replicate

text: Metagenome or environmental sample from rat gut metagenome


text: Jilin Academy of Agricultural Science

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: not collected

text: China: changchun

text: rat

text: 43.826125 N 125.290861 E

text: rat gut metagenome

text: replicate = biological replicate 2


text: Jilin Academy of Agricultural Science

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: not collected

text: China: changchun

text: rat

text: 43.826125 N 125.290861 E

text: rat gut metagenome

text: replicate = biological replicate 3


text: Jilin Academy of Agricultural Science

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: not collected

text: China: changchun

text: rat

text: 43.826125 N 125.290861 E

text: rat gut metagenome

characteristic: organism

text: replicate = biological replicate 4


text: Jilin Academy of Agricultural Science

text: live

text: Metagenome or environmental

text: not collected

text: China: changchun

text: rat

text: 43.826125 N 125.290861 E

text: rat gut metagenome

text: replicate = biological replicate 5

characteristic: title


characteristic: External Id

text: Jilin Academy of Agricultural Science

text: live

text: Metagenome or environmental

text: not collected

text: China: changchun

text: rat

text: 43.826125 N 125.290861 E

text: rat gut metagenome

text: replicate = biological replicate 6


text: Jilin Academy of Agricultural Science

characteristic: INSDC center name

text: live

text: Metagenome or environmental

text: not collected

text: China: changchun

text: rat

text: 43.826125 N 125.290861 E

text: rat gut metagenome

text: replicate = biological replicate 7


text: Jilin Academy of Agricultural Science

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: not collected

text: China: changchun

text: rat

text: 43.826125 N 125.290861 E

text: rat gut metagenome

text: replicate = biological replicate 8


text: Jilin Academy of Agricultural Science

text: live

text: Metagenome or environmental

text: not collected

text: China: changchun

text: rat

text: 43.826125 N 125.290861 E

text: rat gut metagenome

text: replicate = biological replicate 9


text: Jilin Academy of Agricultural Science

text: live

text: Metagenome or environmental

text: not collected

text: China: changchun

text: rat

text: 43.826125 N 125.290861 E

text: rat gut metagenome

text: replicate = biological replicate 10


text: Jilin Academy of Agricultural Science

text: live

text: Metagenome or environmental

text: not collected

text: China: changchun

text: rat

text: 43.826125 N 125.290861 E

text: rat gut metagenome

text: replicate = biological replicate 11


text: Jilin Academy of Agricultural Science

text: live

text: Metagenome or environmental

text: not collected

text: China: changchun

text: rat

text: 43.826125 N 125.290861 E

text: rat gut metagenome

text: replicate = biological replicate 12


text: Jilin Academy of Agricultural Science

text: live

text: Metagenome or environmental

text: not collected

text: China: changchun

text: rat

text: 43.826125 N 125.290861 E

text: rat gut metagenome

text: replicate = biological replicate 13


text: Jilin Academy of Agricultural Science

text: live

text: Metagenome or environmental

text: not collected

text: China: changchun

text: rat

text: 43.826125 N 125.290861 E

text: rat gut metagenome

text: replicate = biological replicate 14


text: Jilin Academy of Agricultural Science

text: live

text: Metagenome or environmental

text: not collected

text: China: changchun

text: rat

text: 43.826125 N 125.290861 E

text: rat gut metagenome

text: replicate = biological replicate 15


text: Jilin Academy of Agricultural Science

text: live

text: Metagenome or environmental

text: not collected

text: China: changchun

text: rat

text: 43.826125 N 125.290861 E

text: rat gut metagenome

text: replicate = biological replicate 16


text: Zhejiang University

text: live

text: Pathogen.cl

text: Anhui Provincial Hospital

text: China: Anhui

text: Homo sapiens

text: bloodstream infection

text: physical

text: 29.41 N 114.54 E

text: Klebsiella pneumoniae

characteristic: strain

text: Pathogen: clinical or host-associated sample from Klebsiella pneumoniae


text: dbGaP

text: live

text: Generic

text: EarlyOnsetMalignancies

characteristic: biospecimen repository

characteristic: biospecimen repository sample id

text: Homo sapiens

text: Case Set

characteristic: study design

characteristic: study name

characteristic: submitted sample id

characteristic: submitted subject id

text: EarlyOnsetMalignancies

characteristic: submitter handle

text: Sample from a human participant in the dbGaP study NCI Early Onset Malignancies Initiative (EOMI)


text: dbGaP

characteristic: INSDC first public

text: live

characteristic: INSDC status

text: Generic

text: EarlyOnsetMalignancies

text: Homo sapiens

text: Case Set

text: NCI Early Onset Malignancies Initiative (EOMI)

text: EarlyOnsetMalignancies


text: Sun Yat-sen University

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: China: Zhuhai City

text: synthetic metagenome

characteristic: host

text: 22.16 N 113.34 E

text: metagenome


characteristic: External Id

text: Huazhong University of Science and Technology

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: China:Shenzhen

text: Mus musculus 1

text: mice fecal pellets

text: 39.91 N 116.41 E

text: feces metagenome

characteristic: organism

characteristic: title


characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: China:Shenzhen

text: Mus musculus 2

text: mice fecal pellets

text: 39.91 N 116.41 E

text: feces metagenome


text: live

text: Metagenome or environmental

text: China:Shenzhen

text: Mus musculus 3

text: mice fecal pellets

text: 39.91 N 116.41 E

text: feces metagenome


text: live

text: Metagenome or environmental

text: China:Shenzhen

text: Mus musculus 4

text: mice fecal pellets

text: 39.91 N 116.41 E

text: feces metagenome


text: live

text: Metagenome or environmental

text: China:Shenzhen

text: Mus musculus 5

text: mice fecal pellets

text: 39.91 N 116.41 E

text: feces metagenome


text: live

text: Metagenome or environmental

text: China:Shenzhen

text: Mus musculus 6

text: mice fecal pellets

text: 39.91 N 116.41 E

text: feces metagenome


text: live

text: Metagenome or environmental

text: China:Shenzhen

text: Mus musculus 7

text: mice fecal pellets

text: 39.91 N 116.41 E

text: feces metagenome


text: live

text: Metagenome or environmental

text: China:Shenzhen

text: Mus musculus 8

text: mice fecal pellets

text: 39.91 N 116.41 E

text: feces metagenome


text: live

text: Metagenome or environmental

text: China:Shenzhen

text: Mus musculus 9

text: mice fecal pellets

text: 39.91 N 116.41 E

text: feces metagenome


text: live

text: Metagenome or environmental

text: China:Shenzhen

text: Mus musculus 10

text: mice fecal pellets

text: 39.91 N 116.41 E

text: feces metagenome


text: live

text: Metagenome or environmental

text: China:Shenzhen

text: Mus musculus 11

text: mice fecal pellets

text: 39.91 N 116.41 E

text: feces metagenome


text: live

text: Metagenome or environmental

text: China:Shenzhen

text: Mus musculus 12

text: mice fecal pellets

text: 39.91 N 116.41 E

text: feces metagenome


text: CAU

text: live

text: Pathogen.cl

text: not collected

text: cattle

text: bovine mastitis

text: CM

characteristic: isolate

text: CLIN

text: not collected

text: Klebsiella pneumoniae


text: CAU

text: live

text: Pathogen.cl

text: not collected

text: cattle

text: bovine mastitis

text: CM

text: CLI

text: not collected

text: Klebsiella pneumoniae


text: CAU

text: live

text: Pathogen.cl

text: not collected

text: cattle

text: bovine mastitis

text: CM

text: not collected

text: Klebsiella pneumoniae


text: CAU

text: live

text: Pathogen.cl

text: not collected

text: cattle

text: bovine mastitis

text: CM

text: milk

text: not collected

text: Klebsiella pneumoniae


text: CAU

text: live

text: Pathogen.cl

text: not collected

text: cattle

text: bovine mastitis

text: SCM

text: not collected

text: Klebsiella pneumoniae


text: CAU

text: live

text: Pathogen.env

text: not collected

text: cattle

text: bovine mastitis

text: EN

text: skin

text: not collected

text: Klebsiella pneumoniae

text: Pathogen: environmental/food/other sample from Klebsiella pneumoniae


text: CAU

text: live

text: Pathogen.env

text: not collected

text: cattle

text: bovine mastitis

text: EN

text: BEDDING

text: not collected

text: Klebsiella pneumoniae


text: CAU

text: live

text: Pathogen.env

text: not collected

text: cattle

text: bovine mastitis

text: EN

text: BIG TANK

text: not collected

text: Klebsiella pneumoniae


text: CAU

text: live

text: Pathogen.env

text: not collected

text: cattle

text: bovine mastitis

text: EN

text: FECE

text: not collected

text: Klebsiella pneumoniae


text: CAU

text: live

text: Pathogen.env

text: not collected

text: cattle

text: bovine mastitis

text: EN

text: feces

text: not collected

text: Klebsiella pneumoniae


text: CAU

text: live

text: Pathogen.env

text: not collected

text: cattle

text: bovine mastitis

text: EN

text: Excreta

text: not collected

text: Klebsiella pneumoniae


text: CAU

text: live

text: Pathogen.env

text: not collected

text: cattle

text: bovine mastitis

text: EN

text: dung

text: not collected

text: Klebsiella pneumoniae


text: CAU

text: live

text: Pathogen.env

text: not collected

text: cattle

text: bovine mastitis

text: EN

text: TEAT

text: not collected

text: Klebsiella pneumoniae


text: CAU

text: live

text: Pathogen.env

text: not collected

text: cattle

text: bovine mastitis

text: EN

text: TEAT SKIN

text: not collected

text: Klebsiella pneumoniae


Rawa

text: Nanjing Agricultural University

text: live

text: Metagenome or environmental

text: China: Jiangsu

text: sludge metagenome

text: mixed culture_1

text: Metagenome or environmental sample from sludge metagenome


Rawb

text: Nanjing Agricultural University

text: live

text: Metagenome or environmental

text: China: Jiangsu

text: sludge metagenome

text: mixed culture_2


Rawc

text: Nanjing Agricultural University

text: live

text: Metagenome or environmental

text: China: Jiangsu

text: sludge metagenome

text: mixed culture_3


text: Nanjing Agricultural University

text: live

text: Metagenome or environmental

text: China: Jiangsu

text: sludge metagenome

text: mixed culture_4


text: Nanjing Agricultural University

text: live

text: Metagenome or environmental

text: China: Jiangsu

text: sludge metagenome

text: mixed culture_5


text: Nanjing Agricultural University

text: live

text: Metagenome or environmental

text: China: Jiangsu

text: sludge metagenome

text: mixed culture_6


text: Nanjing Agricultural University

text: live

text: Metagenome or environmental

text: China: Jiangsu

text: sludge metagenome

text: mixed culture_7


text: Nanjing Agricultural University

text: live

text: Metagenome or environmental

text: China: Jiangsu

text: sludge metagenome

text: mixed culture_8


text: Nanjing Agricultural University

text: live

text: Metagenome or environmental

text: China: Jiangsu

text: sludge metagenome

text: mixed culture_9


text: Nanjing Agricultural University

text: live

text: Metagenome or environmental

text: China: Jiangsu

text: sludge metagenome

text: mixed culture_10


text: Nanjing Agricultural University

text: live

text: Metagenome or environmental

text: China: Jiangsu

text: sludge metagenome

text: mixed culture_11


text: Nanjing Agricultural University

text: live

text: Metagenome or environmental

text: China: Jiangsu

text: sludge metagenome

text: mixed culture_12


text: Nanjing Agricultural University

text: live

text: Metagenome or environmental

text: China: Jiangsu

text: sludge metagenome

text: mixed culture_13


text: Nanjing Agricultural University

text: live

text: Metagenome or environmental

text: China: Jiangsu

text: sludge metagenome

text: mixed culture_14


text: Nanjing Agricultural University

text: live

text: Metagenome or environmental

text: China: Jiangsu

text: sludge metagenome

text: mixed culture_15


text: Nanjing Agricultural University

text: live

text: Metagenome or environmental

text: China: Jiangsu

text: sludge metagenome

text: mixed culture_16


text: Nanjing Agricultural University

text: live

text: Metagenome or environmental

text: China: Jiangsu

text: sludge metagenome

text: mixed culture_17


text: Nanjing Agricultural University

text: live

text: Metagenome or environmental

text: China: Jiangsu

text: sludge metagenome

text: mixed culture_18


text: Hunan University of Chinese Medicine

text: live

text: Metagenome or environmental

text: China: shanghai

text: mice

text: colon contents

text: 39.55144 N 116.713879 E

text: mouse gut metagenome

text: Metagenome or environmental sample from mouse gut metagenome


text: Zhejiang University

text: live

text: Pathogen.cl

text: General Hospital of the Northern Theater Command of the PLA

text: China: Liaoning

text: Homo sapiens

text: bloodstream infection

text: physical

text: 40 N 120 E

text: Enterobacter hormaechei

characteristic: strain

text: Pathogen: clinical or host-associated sample from Enterobacter cloacae subsp. cloacae


transcriptome

text: Northeast Agricultural University

text: live

text: Invertebrate

text: oriental armyworm

characteristic: breed

text: China: Harbin

text: corn

text: insect

text: laboratory

text: Mythimna separata

text: insect body

characteristic: tissue

text: Invertebrate sample from Mythimna separata


name: Animal sample from Euleptes europaea (European left-toed gecko) for VGP genome rEulEur1

text: live

text: Model organism or animal

text: Daniele Salvi, (University of LAquila); Daniele Canestrelli (University of Tuscia)

text: Daniele Salvi

text: The European leaf-toed gecko (Euleptes europaea) is lizard species found in coastal regions of France, Italy and Tunisia and on Mediterranean islands. Its natural habitats are rocky areas and rocky shores (from Wikipedia entry). This sample is from a male in Corsica, France, collected and coordinated by Daniele Salvi and used to generate a high-quality reference genome for the Vertebrate Genomes Project (VGP). Sequencing and genome assembly were conducted at the Vertebrate Genomes Lab (VGL) at the Rockefeller University lead by Olivier Fedrigo and Erich D. Jarvis.

characteristic: description

text: adult

text: France: Corsica

text: 42.249549 N 8.660302 E

text: Euleptes europaea

text: male

characteristic: sex

text: muscle

text: fresh frozen

characteristic: treatment


CZRs

text: Shanghai Jiao Tong University

characteristic: INSDC first public

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: China: zhejiang

text: not collected'

text: 29.4167 N 121 E

text: sediment metagenome

text: CZRs metagenome


CZRw

text: Shanghai Jiao Tong University

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: China: zhejiang

text: not collected

characteristic: host

text: 29.4167 N 121 E

text: drinking water metagenome

text: CZRw metagenome


DHKRs

characteristic: External Id

text: Shanghai Jiao Tong University

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: China: zhejiang

text: not collected

text: 30.533 N 119.8833 E

text: sediment metagenome

characteristic: organism

text: DHKRs metagenome


DHKRw

text: Shanghai Jiao Tong University

characteristic: INSDC center name

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: China: zhejiang

text: not collected

text: 30.533 N 119.8833 E

text: drinking water metagenome

text: DHKRw metagenome

characteristic: title


text: Hubei University

text: live

text: Microbe, viral or environmental

text: College of Life Sciences, Hubei University

text: China:Wuhan

text: CGMCC

text: 30.6 N 114.3 E

text: Fusarium

characteristic: replicate

text: whole organism

text: Fusarium graminearum

characteristic: strain

text: Fusarium graminearum RNA seq


HSRs

text: Shanghai Jiao Tong University

text: live

text: Metagenome or environmental

text: China: zhejiang

text: not collected

text: 29.5833 N 121.3667 E

text: sediment metagenome

text: HSRs metagenome


HSRw

text: Shanghai Jiao Tong University

text: live

text: Metagenome or environmental

text: China: zhejiang

text: not collected

text: 29.5833 N 121.3667 E

text: drinking water metagenome

text: HSRw metagenome


HXRs

text: Shanghai Jiao Tong University

text: live

text: Metagenome or environmental

text: China: zhejiang

text: not collected

text: 29.01667 N 120.5 E

text: sediment metagenome

text: HXRs metagenome


HXRw

text: Shanghai Jiao Tong University

text: live

text: Metagenome or environmental

text: China: zhejiang

text: not collected

text: 29.01667 N 120.5 E

text: drinking water metagenome

text: HXRw metagenome


LBRs

text: Shanghai Jiao Tong University

text: live

text: Metagenome or environmental

text: China: zhejiang

text: not collected

text: 30 N 121.25 E

text: sediment metagenome

text: LBRs metagenome


LBRw

text: Shanghai Jiao Tong University

text: live

text: Metagenome or environmental

text: China: zhejiang

text: not collected

text: 30 N 121.25 E

text: drinking water metagenome

text: LBRw metagenome


LDRs

text: Shanghai Jiao Tong University

text: live

text: Metagenome or environmental

text: China: zhejiang

text: not collected

text: 28.133 N 121.1833 E

text: sediment metagenome

text: LDRs metagenome


LDRw

text: Shanghai Jiao Tong University

text: live

text: Metagenome or environmental

text: China: zhejiang

text: not collected

text: 28.133 N 121.1833 E

text: drinking water metagenome

text: LDRw metagenome


LHRs

text: Shanghai Jiao Tong University

text: live

text: Metagenome or environmental

text: China: zhejiang

text: not collected

text: 29.9833 N 121.1667 E

text: sediment metagenome

text: LHRs metagenome


LHRw

text: Shanghai Jiao Tong University

text: live

text: Metagenome or environmental

text: China: zhejiang

text: not collected

text: 29.9833 N 121.1667 E

text: drinking water metagenome

text: LHRw metagenome


MTKRs

text: Shanghai Jiao Tong University

text: live

text: Metagenome or environmental

text: China: zhejiang

text: not collected

text: 29.05 N 120.5167 E

text: sediment metagenome

text: MTKRs metagenome


MTKRw

text: Shanghai Jiao Tong University

text: live

text: Metagenome or environmental

text: China: zhejiang

text: not collected

text: 29.05 N 120.5167 E

text: drinking water metagenome

text: MTKRw metagenome


text: UC Berkeley

text: live

text: Model organism or animal

text: slow swimmer

text: SrEpac wt

characteristic: isolate

text: Salpingoeca rosetta

text: replicate 1

text: SrEpac

text: N/A (microbrial eukaryote)

characteristic: tissue

text: Model organism or animal sample from Salpingoeca rosetta


text: UC Berkeley

text: live

text: Model organism or animal

text: slow swimmer

text: SrEpac wt

text: Salpingoeca rosetta

text: replicate 2

text: SrEpac

text: N/A (microbrial eukaryote)


text: UC Berkeley

text: live

text: Model organism or animal

text: slow swimmer

text: SrEpac wt

text: Salpingoeca rosetta

text: replicate 3

text: SrEpac

text: N/A (microbrial eukaryote)


text: UC Berkeley

text: live

text: Model organism or animal

text: slow swimmer

text: cRFXa PTS1

text: Salpingoeca rosetta

text: replicate 1

text: SrEpac

text: N/A (microbrial eukaryote)


text: UC Berkeley

text: live

text: Model organism or animal

text: slow swimmer

text: cRFXa PTS1

text: Salpingoeca rosetta

text: replicate 2

text: SrEpac

text: N/A (microbrial eukaryote)


text: UC Berkeley

text: live

text: Model organism or animal

text: slow swimmer

text: cRFXa PTS1

text: Salpingoeca rosetta

text: replicate 3

text: SrEpac

text: N/A (microbrial eukaryote)


text: UC Berkeley

text: live

text: Model organism or animal

text: slow swimmer

text: SrEpac + Rpl36a[P56Q]

text: Salpingoeca rosetta

text: replicate 1

text: SrEpac

text: N/A (microbrial eukaryote)


text: UC Berkeley

text: live

text: Model organism or animal

text: slow swimmer

text: SrEpac + Rpl36a[P56Q]

text: Salpingoeca rosetta

text: replicate 2

text: SrEpac

text: N/A (microbrial eukaryote)


text: UC Berkeley

text: live

text: Model organism or animal

text: slow swimmer

text: SrEpac + Rpl36a[P56Q]

text: Salpingoeca rosetta

text: replicate 3

text: SrEpac

text: N/A (microbrial eukaryote)


text: UC Berkeley

text: live

text: Model organism or animal

text: slow swimmer

text: SrEpac + Rpl36a[P56Q]

text: Salpingoeca rosetta

text: replicate 4

text: SrEpac

text: N/A (microbrial eukaryote)


text: UC Berkeley

text: live

text: Model organism or animal

text: slow swimmer

text: foxJ1 PTS

text: Salpingoeca rosetta

text: replicate 1

text: SrEpac

text: N/A (microbrial eukaryote)


text: UC Berkeley

text: live

text: Model organism or animal

text: slow swimmer

text: foxJ1 PTS

text: Salpingoeca rosetta

text: replicate 2

text: SrEpac

text: N/A (microbrial eukaryote)


text: UC Berkeley

text: live

text: Model organism or animal

text: slow swimmer

text: foxJ1 PTS

text: Salpingoeca rosetta

text: replicate 3

text: SrEpac

text: N/A (microbrial eukaryote)


QCRs

text: Shanghai Jiao Tong University

text: live

text: Metagenome or environmental

text: China: zhejiang

text: not collected

text: 29.5167 N 121.01667 E

text: sediment metagenome

text: QCRs metagenome


text: Delaware Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Delaware

text: Homo sapiens

text: 42 years

text: female

text: SARS-CoV-2/Human/USA/DE-DHSS-B1166900/2021

text: clinical

text: baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: Delaware Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Delaware

text: Homo sapiens

text: 22 years

text: female

text: SARS-CoV-2/Human/USA/DE-DHSS-B1234177/2022

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Baseline surveillance


text: Delaware Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Delaware

text: Homo sapiens

text: 84 years

text: male

text: SARS-CoV-2/Human/USA/DE-DHSS-B1234178/2022

text: clinical

text: Baseline surveillance


text: Delaware Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Delaware

text: Homo sapiens

text: 80 years

text: female

text: SARS-CoV-2/Human/USA/DE-DHSS-B1234179/2022

text: clinical

text: Baseline surveillance


text: Delaware Public Health Lab

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nemours

text: USA: Delaware

text: Homo sapiens

text: 6 months

text: male

text: SARS-CoV-2/Human/USA/DE-DHSS-B1234180/2022

text: clinical

text: Baseline surveillance