Enriched 1

text: Lebanese American University

text: live

text: Metagenome or environmental

text: Lebanon: Byblos

text: 33.8890 N 35.4733 E

text: soil metagenome


Enriched 8

status: PUBLIC

characteristic: External Id

text: Lebanese American University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

tag: attribute

text: Lebanon: Byblos

text: 33.8890 N 35.4733 E

text: soil metagenome

characteristic: organism

characteristic: title


Enriched 15

text: Lebanese American University

text: live

text: Metagenome or environmental

text: Lebanon: Byblos

text: 33.8890 N 35.4733 E

text: soil metagenome


Enriched 26

text: Lebanese American University

text: live

text: Metagenome or environmental

text: Lebanon: Byblos

text: 33.8890 N 35.4733 E

text: soil metagenome


Enriched 32

text: Lebanese American University

text: live

text: Metagenome or environmental

text: Lebanon: Byblos

text: 33.8890 N 35.4733 E

text: soil metagenome


Enriched 36

text: Lebanese American University

text: live

text: Metagenome or environmental

text: Lebanon: Byblos

text: 33.8890 N 35.4733 E

text: soil metagenome


Biofilm 1

text: Lebanese American University

text: live

text: Metagenome or environmental

text: Lebanon: Byblos

text: 33.8890 N 35.4733 E

text: soil metagenome

text: WEA


Biofilm 2

text: Lebanese American University

text: live

text: Metagenome or environmental

text: Lebanon: Byblos

text: 33.8890 N 35.4733 E

text: soil metagenome

text: WECathode


Biofilm 3

text: Lebanese American University

text: live

text: Metagenome or environmental

text: Lebanon: Byblos

text: 33.8890 N 35.4733 E

text: soil metagenome

text: CEAn


Biofilm 4

text: Lebanese American University

text: live

text: Metagenome or environmental

text: Lebanon: Byblos

text: 33.8890 N 35.4733 E

text: soil metagenome

text: CECa


Biofilm 5

text: Lebanese American University

text: live

text: Metagenome or environmental

text: Lebanon: Byblos

text: 33.8890 N 35.4733 E

text: soil metagenome

text: Pad


Biofilm 6

text: Lebanese American University

text: live

text: Metagenome or environmental

text: Lebanon: Byblos

text: 33.8890 N 35.4733 E

text: soil metagenome

text: PCd


Biofilm 7

text: Lebanese American University

text: live

text: Metagenome or environmental

text: Lebanon: Byblos

text: 33.8890 N 35.4733 E

text: soil metagenome

text: SSAnodic


Biofilm 8

text: Lebanese American University

text: live

text: Metagenome or environmental

text: Lebanon: Byblos

text: 33.8890 N 35.4733 E

text: soil metagenome

text: SSCathodic


text: Mississippi State University

text: live

text: MIMAG.host-associated

text: not provided

text: Keywords: GSC:MIxS;MIMAG:6.0

characteristic: description

text: TRUE

characteristic: environmental-sample

text: not provided

text: Drosophila atripex

characteristic: host

text: ovaries

text: sAtri

characteristic: isolate

text: Drosophila atripex metagenome

characteristic: metagenome-source

text: TRUE

characteristic: metagenomic

text: whole organism

text: metagenomic assembly

text: MIMAG Metagenome-assembled Genome sample from Spiroplasma endosymbiont of Drosophila atripex

type: derived-from


characteristic: External Id

text: Texas Department of State Health Services-SARS-CoV-2 submission group

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Texas

text: Homo sapiens

text: female

text: Anterior nasal swab

text: TXDSHS

characteristic: strain

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

text: Texas Department of State Health Services

text: USA: Texas

text: Homo sapiens

text: female

text: Anterior nasal swab

text: Severe acute respiratory syndrome coronavirus 2

text: TXDSHS


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Texas

text: Homo sapiens

text: male

text: Anterior nasal swab

text: TXDSHS


text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: USA: Texas

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: Baseline surveillance (random sampling)

text: TXDSHS


text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

characteristic: SRA accession

text: USA: Texas

text: Homo sapiens

text: male

text: nasopharyngeal swab

text: Baseline surveillance (random sampling)

text: TXDSHS


text: live

text: SARS-CoV-2: clinical or host-associated

text: Swellendam PHC Clinic wc SHC

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-N266/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-N266/2021

characteristic: organism

text: Potential re-infection/surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service

characteristic: title


text: University of Cape Town and National Health Laboratory Service

text: live

text: SARS-CoV-2: clinical or host-associated

text: Swellendam PHC Clinic wc SHC

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-T107/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-T107/2022

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Brooklyn Chest Hospital wc BCH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-T433/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-T433/2022

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Testing Centre NHLS WC (Green Point)

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U311/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U311/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Hawston Clinic wc HSC

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U312/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U312/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Caledon Clinic wc CAL

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U314/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U314/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Hermanus CDC wc HCO

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U315/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U315/2022

text: Surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: Testing Centre NHLS WC (Green Point)

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U316/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U316/2022

text: Severe acute respiratory syndrome coronavirus 2

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lotus River CDC wc LRC

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U317/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U317/2022

text: Surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town and National Health Laboratory Service

text: live

text: SARS-CoV-2: clinical or host-associated

text: Helderberg Hospital wc HHH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U320/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U320/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lotus River CDC wc LRC

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U321/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U321/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Testing Centre NHLS WC (Green Point)

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U322/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U322/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Helderberg Hospital wc HHH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U325/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U325/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Hermanus CDC wc HCO

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U327/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U327/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Kleinmond Clinic wc KMC

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U328/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U328/2022

text: Surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lotus River CDC wc LRC

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U331/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U331/2022

text: Severe acute respiratory syndrome coronavirus 2

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Laingsburg Clinic wc LCH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U337/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U337/2022

text: Surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town and National Health Laboratory Service

text: live

text: SARS-CoV-2: clinical or host-associated

text: Citrusdal Clinic wc CDP

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U341/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U341/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Valkenberg Hospital wc VBH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U342/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U342/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Wesfleur Hospital wc WFH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U343/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U343/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: New Somerset Hospital wc NSH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U348/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U348/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Testing Centre NHLS WC (Green Point)

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U349/2022

text: Homo sapiens

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U349/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Valkenberg Hospital wc VBH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U353/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U353/2022

text: Surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: Vredendal Hospital wc VRE

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U354/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U354/2022

text: Severe acute respiratory syndrome coronavirus 2

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Valkenberg Hospital wc VBH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U355/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U355/2022

text: Surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town and National Health Laboratory Service

text: live

text: SARS-CoV-2: clinical or host-associated

text: Valkenberg Hospital wc VBH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U356/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U356/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Alexandra Hospital wc ALH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U357/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U357/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Alexandra Hospital wc ALH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U360/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U360/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: SAS Saldanha

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U361/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U361/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: SAS Saldanha

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U362/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U362/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Hermanus CDC wc HCO

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U363/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U363/2022

text: Surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: Alexandra Hospital wc ALH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U367/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U367/2022

text: Severe acute respiratory syndrome coronavirus 2

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: New Somerset Hospital wc NSH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U368/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U368/2022

text: Surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town and National Health Laboratory Service

text: live

text: SARS-CoV-2: clinical or host-associated

text: Testing Centre NHLS WC (Green Point)

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U369/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U369/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Testing Centre NHLS WC (Green Point)

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U370/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U370/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Helderberg Hospital wc HHH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U371/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U371/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Valkenberg Hospital wc VBH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GP-U372/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GP-U372/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: False Bay Hospital wc FBH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-0232/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-0232/2020

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-0359/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-0359/2020

text: Potential re-infection/surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-0515/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-0515/2020

text: Severe acute respiratory syndrome coronavirus 2

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: 2 Military Hospital wc MAA

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-0625/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-0625/2020

text: Potential re-infection/surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town and National Health Laboratory Service

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-1620/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-1620/2020

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Victoria Hospital wc VHW

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-2306/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-2306/2020

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-2442/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-2442/2020

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-2652/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-2652/2020

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-2684/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-2684/2020

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: 2 Military Hospital wc MAA

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-3614/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-3614/2020

text: Potential re-infection/surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-3882/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-3882/2020

text: Severe acute respiratory syndrome coronavirus 2

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-4165/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-4165/2020

text: Potential re-infection/surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town and National Health Laboratory Service

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mowbray Maternity Hospital wc MMH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-4311/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-4311/2020

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Hornlee Clinic wc HLC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-7131/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-7131/2020

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Crags Clinic wc CRG

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-7159/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-7159/2020

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: 2 Military Hospital wc MAA

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-8179/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-8179/2020

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Nazareth House [Vredehoek]

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-8235/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-8235/2020

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: 2 Military Hospital wc MAA

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-8549/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-8549/2020

text: Potential re-infection/surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: 2 Military Hospital wc MAA

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-9271/2020

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-9271/2020

text: Severe acute respiratory syndrome coronavirus 2

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Riversdale Clinic wc RAV

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-9331/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-9331/2020

text: Potential re-infection/surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town and National Health Laboratory Service

text: live

text: SARS-CoV-2: clinical or host-associated

text: Pacaltsdorp Clinic wc PAC

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-9808/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-9808/2021

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Plettenberg Bay Clinic wc PLC

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-9864/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-9864/2021

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: 2 Military Hospital wc MAA

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-A163/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-A163/2021

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: 2 Military Hospital wc MAA

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-AA97/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-AA97/2021

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: 2 Military Hospital wc MAA

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-AG94/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-AG94/2021

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Brooklyn Chest Hospital wc BCH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-AI40/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-AI40/2021

text: Potential re-infection/surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: Conville CDC wc CVC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-AI85/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-AI85/2021

text: Severe acute respiratory syndrome coronavirus 2

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-AJ81/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-AJ81/2021

text: Potential re-infection/surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town and National Health Laboratory Service

text: live

text: SARS-CoV-2: clinical or host-associated

text: 2 Military Hospital wc MAA

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-AM74/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-AM74/2021

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Victoria Hospital wc VHW

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-AP31/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-AP31/2021

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Mowbray Maternity Hospital wc MMH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-AP70/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-AP70/2021

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-AP75/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-AP75/2021

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: 2 Military Hospital wc MAA

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-AQ38/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-AQ38/2021

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Conville CDC wc CVC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-AQ66/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-AQ66/2021

text: Potential re-infection/surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: Nazareth House [Vredehoek]

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-AQ72/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-AQ72/2021

text: Severe acute respiratory syndrome coronavirus 2

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-AS44/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-AS44/2021

text: Potential re-infection/surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town and National Health Laboratory Service

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-AT67/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-AT67/2021

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Mowbray Maternity Hospital wc MMH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-AT92/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-AT92/2021

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Conville CDC wc CVC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-AU72/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-AU72/2021

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: 2 Military Hospital wc MAA

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-B269/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-B269/2021

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Victoria Hospital wc VHW

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-B442/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-B442/2021

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Crags Clinic wc CRG

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BE54/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BE54/2021

text: Potential re-infection/surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BF58/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BF58/2021

text: Severe acute respiratory syndrome coronavirus 2

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: New Horizon Clinic wc NZC

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BG42/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BG42/2021

text: Potential re-infection/surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town and National Health Laboratory Service

text: live

text: SARS-CoV-2: clinical or host-associated

text: Alma CDC wc AHC

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BH88/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BH88/2022

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BN57/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BN57/2021

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BR54/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BR54/2022

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: 2 Military Hospital wc MAA

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BS31/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BS31/2022

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: 2 Military Hospital wc MAA

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BS40/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BS40/2022

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Victoria Hospital wc VHW

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BS76/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BS76/2022

text: Potential re-infection/surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: Victoria Hospital wc VHW

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BY43/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BY43/2022

text: Severe acute respiratory syndrome coronavirus 2

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: 2 Military Hospital wc MAA

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BY92/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BY92/2022

text: Potential re-infection/surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town and National Health Laboratory Service

text: live

text: SARS-CoV-2: clinical or host-associated

text: 2 Military Hospital wc MAA

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-BZ48/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-BZ48/2022

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Riversdale Clinic wc RAV

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CA33/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CA33/2022

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CD49/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CD49/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Victoria Hospital wc VHW

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CD52/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CD52/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Victoria Hospital wc VHW

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CD53/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CD53/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lentegeur Hospital wc LGH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CD54/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CD54/2022

text: Surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lentegeur Hospital wc LGH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CD55/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CD55/2022

text: Severe acute respiratory syndrome coronavirus 2

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Mitchells Plain Hospital wc MPH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CD58/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CD58/2022

text: Surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town and National Health Laboratory Service

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mitchells Plain Hospital wc MPH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CD59/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CD59/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CD60/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CD60/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CD64/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CD64/2022

text: CoV-Cass


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CD66/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CD66/2022

text: CoV-Cass


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CD67/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CD67/2022

text: CoV-Cass


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CD68/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CD68/2022

text: CoV-Cass

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CD69/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CD69/2022

text: Severe acute respiratory syndrome coronavirus 2

text: CoV-Cass


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CD70/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CD70/2022

text: CoV-Cass

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town and National Health Laboratory Service

text: live

text: SARS-CoV-2: clinical or host-associated

text: Chris Hani Baragwanath Hospital

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CD71/2020

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CD71/2020

text: CLII MITS


text: live

text: SARS-CoV-2: clinical or host-associated

text: Chris Hani Baragwanath Hospital

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CD72/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CD72/2021

text: CLII MITS


text: live

text: SARS-CoV-2: clinical or host-associated

text: Chris Hani Baragwanath Hospital

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CD73/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CD73/2021

text: CLII MITS


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CD74/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CD74/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CD75/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CD75/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Victoria Hospital wc VHW

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CD77/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CD77/2022

text: Surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: Victoria Hospital wc VHW

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CD78/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CD78/2022

text: Severe acute respiratory syndrome coronavirus 2

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: District 6 CDC wc DSI

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CD80/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CD80/2022

text: Surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town and National Health Laboratory Service

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CD82/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CD82/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: NHLS Health & Safety (CO - WC)

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CD85/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CD85/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lotus River CDC wc LRC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CD87/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CD87/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CD88/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CD88/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: False Bay Hospital wc FBH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CD89/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CD89/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Mitchells Plain Hospital wc MPH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CD94/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CD94/2022

text: Surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: Victoria Hospital wc VHW

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CD97/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CD97/2022

text: Severe acute respiratory syndrome coronavirus 2

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: False Bay Hospital wc FBH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CD98/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CD98/2022

text: Surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town and National Health Laboratory Service

text: live

text: SARS-CoV-2: clinical or host-associated

text: Kwamandlenkosi Clinic wc KMN

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CD99/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CD99/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Mitchells Plain Hospital wc MPH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE01/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE01/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE03/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE03/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: 2 Military Hospital wc MAA

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE05/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE05/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Victoria Hospital wc VHW

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE06/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE06/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: False Bay Hospital wc FBH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE07/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE07/2022

text: Surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE09/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE09/2022

text: Severe acute respiratory syndrome coronavirus 2

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE13/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE13/2022

text: Surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town and National Health Laboratory Service

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE14/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE14/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Victoria Hospital wc VHW

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE15/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE15/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE16/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE16/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE17/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE17/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE18/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE18/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Kwamandlenkosi Clinic wc KMN

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE20/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE20/2022

text: November week3 surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: Kwamandlenkosi Clinic wc KMN

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE22/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE22/2022

text: Severe acute respiratory syndrome coronavirus 2

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Kwamandlenkosi Clinic wc KMN

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE23/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE23/2022

text: Surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town and National Health Laboratory Service

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mitchells Plain Hospital wc MPH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE25/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE25/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Mitchells Plain Hospital wc MPH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE27/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE27/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Mitchells Plain Hospital wc MPH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE28/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE28/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE31/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE31/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE32/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE32/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE36/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE36/2022

text: Surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE39/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE39/2022

text: Severe acute respiratory syndrome coronavirus 2

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE40/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE40/2022

text: Surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town and National Health Laboratory Service

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE41/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE41/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE43/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE43/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE44/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE44/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE45/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE45/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Forensic Medicine - UCT

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE47/2022

text: Homo sapiens

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE47/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE53/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE53/2022

text: Surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE56/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE56/2022

text: Severe acute respiratory syndrome coronavirus 2

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Alexandra Hospital wc ALH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE57/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE57/2022

text: Surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town and National Health Laboratory Service

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE61/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE61/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE62/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE62/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lentegeur Hospital wc LGH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE70/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE70/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Crossroads CDC wc CRC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE71/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE71/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Mitchells Plain Hospital wc MPH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE78/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE78/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Mitchells Plain Hospital wc MPH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE79/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE79/2022

text: Surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE83/2023

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE83/2023

text: Severe acute respiratory syndrome coronavirus 2

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE84/2023

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE84/2023

text: Surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town and National Health Laboratory Service

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-CE85/2023

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-CE85/2023

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Victoria Hospital wc VHW

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-D115/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-D115/2021

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: 2 Military Hospital wc MAA

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-D411/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-D411/2021

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Riversdale Clinic wc RAV

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-D635/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-D635/2021

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Victoria Hospital wc VHW

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-E364/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-E364/2021

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Mitchells Plain Hospital wc MPH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-E615/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-E615/2021

text: Potential re-infection/surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: D'Almeida Clinic wc DAL

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-E791/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-E791/2021

text: Severe acute respiratory syndrome coronavirus 2

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-E873/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-E873/2021

text: Potential re-infection/surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town and National Health Laboratory Service

text: live

text: SARS-CoV-2: clinical or host-associated

text: Groote Schuur Hospital wc GSH

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-E960/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-E960/2021

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Victoria Hospital wc VHW

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-F045/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-F045/2021

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: 2 Military Hospital wc MAA

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-F526/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-F526/2021

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Conville CDC wc CVC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-G712/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-G712/2021

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Pacaltsdorp Clinic wc PAC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-G744/2021

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-G744/2021

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Thembalethu CDC wc THC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-H253/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-H253/2021

text: Potential re-infection/surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: Thembalethu CDC wc THC

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-GS-I773/2021

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-GS-I773/2021

text: Severe acute respiratory syndrome coronavirus 2

text: Potential re-infection/surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZB97/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZB97/2022

text: Surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town and National Health Laboratory Service

text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZB99/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZB99/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZC01/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZC01/2022

text: Surveillance/Pfizer vaccine breakthrough


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZC02/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZC02/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZC03/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZC03/2022


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZC05/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZC05/2022

text: Surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZC06/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZC06/2022

text: Severe acute respiratory syndrome coronavirus 2

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZC08/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZC08/2022

text: Surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town and National Health Laboratory Service

text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZC09/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZC09/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZC11/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZC11/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZC12/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZC12/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZC13/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZC13/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZC14/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZC14/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZC15/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZC15/2022

text: Surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZC16/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZC16/2022

text: Severe acute respiratory syndrome coronavirus 2

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZC21/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZC21/2022

text: Surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town and National Health Laboratory Service

text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZC22/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZC22/2022

text: Surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Northern Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZC23/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZC23/2022

text: Private surveillance/Vaccine breakthrough


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZC26/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZC26/2022

text: Private surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZC30/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZC30/2022

text: Private surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZC31/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZC31/2022

text: Private surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZC32/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZC32/2022

text: Severe acute respiratory syndrome coronavirus 2

text: Private surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZC33/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZC33/2022

text: Private surveillance

text: Wellcome Centre for Infectious Disease Research in Africa, Department of Pathology, Faculty of Health Sciences, University of Cape Town and National Health Laboratory Service


text: University of Cape Town and National Health Laboratory Service

text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZC34/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZC34/2022

text: Private surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZC35/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZC35/2022

text: Private surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZC36/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZC36/2022

text: Private surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZC37/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZC37/2022

text: Private surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZC38/2022

text: Homo sapiens

text: female

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZC38/2022

text: Private surveillance


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZC39/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZC39/2022

text: Private surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: live

text: SARS-CoV-2: clinical or host-associated

text: Lancet

text: South Africa:Western Cape

text: hCoV-19/SouthAfrica/NHLS-UCT-LA-ZC40/2022

text: Homo sapiens

text: male

text: SARS-CoV-2/human/SouthAfrica/NHLS-UCT-LA-ZC40/2022

text: Severe acute respiratory syndrome coronavirus 2

text: Private surveillance


text: Centers for Disease Control and Prevention Enteric Diseases Laboratory Branch

text: live

text: Pathogen.cl

text: CDC

text: USA

text: Vibrio cholerae

text: PulseNet

text: human

text: Vibrio cholerae


text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.cl

text: Campylobacter jejuni

text: Campylobacter jejuni


Parent inoculum1

text: IICT

text: live

text: Metagenome or environmental

text: India

text: natural / free-living

text: environmental

text: 17.4301 N 78.5416 E

text: wetland metagenome

text: Metagenome or environmental sample from wetland metagenome


text: SARS-CoV-2/Human/USA/WI-CDC-2-6762990/2022

text: CDC DVD Genomics and DIscovery Team

text: live

characteristic: Isolate

text: SARS-CoV-2: clinical or host-associated

text: WI State Laboratory of Hygiene

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Wisconsin

text: Homo sapiens

text: male

text: nasopharyngeal swab

characteristic: lineage/clade name

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/WI-CDC-2-6762978/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: WI State Laboratory of Hygiene

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Wisconsin

text: Homo sapiens

characteristic: host

text: male

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/WI-CDC-2-6762888/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: WI State Laboratory of Hygiene

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Wisconsin

text: Homo sapiens

text: male

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/WI-CDC-2-6762879/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: WI State Laboratory of Hygiene

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Wisconsin

text: Homo sapiens

text: male

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/WI-CDC-2-6762860/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: WI State Laboratory of Hygiene

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Wisconsin

text: Homo sapiens

text: male

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/UT-CDC-2-6762776/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: UT-Unified State Labs: Public Health Utah DOH

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/UT-CDC-2-6762770/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

text: male

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/UT-CDC-2-6762763/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/UT-CDC-2-6762753/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/UT-CDC-2-6762699/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/UT-CDC-2-6762684/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

text: male

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/UT-CDC-2-6762681/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/UT-CDC-2-6762675/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: Severe acute respiratory syndrome coronavirus 2

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/UT-CDC-2-6762662/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/UT-CDC-2-6762656/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Utah

text: Homo sapiens

text: male

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/TX-CDC-2-6763384/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: TX-Houston Health Department Laboratory

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Texas

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/TX-CDC-2-6763377/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: TX-Houston Health Department Laboratory

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Texas

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/TX-CDC-2-6763351/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: TX-Houston Health Department Laboratory

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Texas

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/TX-CDC-2-6763280/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: TX-Houston Health Department Laboratory

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Texas

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/TX-CDC-2-6763266/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: TX-Houston Health Department Laboratory

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Texas

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6763662/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6763661/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6763659/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6763656/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6763652/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: male

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6763598/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6763597/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6763596/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6763590/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6763589/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: Severe acute respiratory syndrome coronavirus 2

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6763587/2022

text: CDC DVD Genomics and DIscovery Team

text: live

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text: Nasopharyngeal swab

text: N

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text: USA: Rhode Island

text: Homo sapiens

text: male

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text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


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text: CDC DVD Genomics and DIscovery Team

text: live

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text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

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text: USA: Rhode Island

text: Homo sapiens

text: female

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text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6763579/2022

text: CDC DVD Genomics and DIscovery Team

text: live

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text: Nasopharyngeal swab

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text: N

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text: USA: Rhode Island

text: Homo sapiens

text: male

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text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6763578/2022

text: CDC DVD Genomics and DIscovery Team

text: live

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text: Nasopharyngeal swab

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text: N

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text: USA: Rhode Island

text: Homo sapiens

text: male

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text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6763573/2022

text: CDC DVD Genomics and DIscovery Team

text: live

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text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

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text: USA: Rhode Island

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6763569/2022

text: CDC DVD Genomics and DIscovery Team

text: live

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text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

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text: USA: Rhode Island

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6763568/2022

text: CDC DVD Genomics and DIscovery Team

text: live

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text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

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text: USA: Rhode Island

text: Homo sapiens

text: female

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text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6763567/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: male

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text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6763566/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: female

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text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6763563/2022

text: CDC DVD Genomics and DIscovery Team

text: live

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text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: male

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6763560/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6763553/2022

text: CDC DVD Genomics and DIscovery Team

text: live

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text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: male

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6763551/2022

text: CDC DVD Genomics and DIscovery Team

text: live

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text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: male

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6763500/2022

text: CDC DVD Genomics and DIscovery Team

text: live

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text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: female

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text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6763497/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6763492/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

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text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6763491/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: female

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text: Severe acute respiratory syndrome coronavirus 2

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6763490/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6763489/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6763483/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-6763482/2022

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: male

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance