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text: CDC-OAMD

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text: CDC-OAMD

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text: CDC-OAMD

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text: Homo sapiens

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text: CDC-OAMD

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text: Homo sapiens

text: male

text: Nasal Swabs

text: baseline surveillance (random sampling)

text: CDC Sars CoV2 Sequencing Baseline Constellation


text: SARS-CoV-2/Human/USA/CA-CDC-QDX46776132/2023

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: Hologic

text: USA: California

text: Homo sapiens

text: female

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX46776129/2023

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: Hologic

text: USA: California

text: Homo sapiens

text: male

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX46776128/2023

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: Hologic

text: USA: California

text: Homo sapiens

text: female

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX46776126/2023

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: Hologic

text: USA: California

text: Homo sapiens

text: female

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX46776125/2023

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: Hologic

text: USA: California

text: Homo sapiens

text: male

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX46776124/2023

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: Hologic

text: USA: California

text: Homo sapiens

text: male

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX46776122/2023

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: Hologic

text: USA: California

text: Homo sapiens

text: female

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX46776120/2023

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: Hologic

text: USA: California

text: Homo sapiens

text: male

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX46776117/2023

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: Hologic

text: USA: California

text: Homo sapiens

text: female

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX46776115/2023

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: Hologic

text: USA: California

text: Homo sapiens

text: male

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX46776114/2023

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: Hologic

text: USA: California

text: Homo sapiens

text: male

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX46776111/2023

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: Hologic

text: USA: California

text: Homo sapiens

text: female

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX46776110/2023

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: Hologic

text: USA: California

text: Homo sapiens

text: female

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX46776109/2023

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: Hologic

text: USA: California

text: Homo sapiens

text: female

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX46776108/2023

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: Hologic

text: USA: California

text: Homo sapiens

text: female

text: Nasal Swabs

text: Severe acute respiratory syndrome coronavirus 2

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/CA-CDC-QDX46776107/2023

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: Hologic

text: USA: California

text: Homo sapiens

text: male

text: Nasal Swabs

text: baseline surveillance (random sampling)

text: CDC Sars CoV2 Sequencing Baseline Constellation


text: SARS-CoV-2/Human/USA/AL-CDC-QDX46944448/2023

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: Hologic

text: USA: Alabama

text: Homo sapiens

text: female

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/AL-CDC-QDX46944298/2023

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: Hologic

text: USA: Alabama

text: Homo sapiens

text: female

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: SARS-CoV-2/Human/USA/AL-CDC-QDX46775310/2023

text: CDC-OAMD

text: live

text: SARS-CoV-2: clinical or host-associated

text: Quest Diagnostics Incorporated

text: Nasal Swabs

text: Nasal Swabs

text: Roche

text: USA: Alabama

text: Homo sapiens

text: male

text: Nasal Swabs

text: baseline surveillance (random sampling)


text: PulseNet Next Generation Subtyping Methods Unit

text: live

text: Pathogen.env

text: Food Item

text: Listeria monocytogenes

text: GenomeTrakr; LFFM-FY3

text: Massachusetts Department of Public Health

characteristic: strain

text: Listeria monocytogenes


text: live

text: Pathogen.env

text: Environment

text: Listeria monocytogenes

text: GenomeTrakr; LFFM-FY3

text: Listeria monocytogenes


text: Institut de Recherche pour le Developpement (IRD)

text: live

text: Metagenome or environmental

text: French Guiana: Petit Saut reservoir

text: Zone 1, tree A, deep

text: 5.0173 N 53.0076 W

text: metagenome

text: anaerobe

text: biological replicate A

characteristic: replicate

text: biofilm scrubbing with a syringe

text: filtration on 0.22 µm filter

text: 40 mL

text: deep

text: Biofilm on wood trunk, tropical reservoir


text: live

text: Metagenome or environmental

text: French Guiana: Petit Saut reservoir

text: Zone 1, tree B, deep

text: 5.0173 N 53.0076 W

text: metagenome

text: anaerobe

text: biological replicate B

text: biofilm scrubbing with a syringe

text: filtration on 0.22 µm filter

text: 40 mL

text: deep


text: live

text: Metagenome or environmental

text: French Guiana: Petit Saut reservoir

text: Zone 1, tree C, deep

text: 5.0173 N 53.0076 W

text: metagenome

text: anaerobe

text: biological replicate C

text: biofilm scrubbing with a syringe

text: filtration on 0.22 µm filter

text: 40 mL

text: deep


text: live

text: Metagenome or environmental

text: French Guiana: Petit Saut reservoir

text: Zone 2, tree A, deep

text: 4.9311 N 52.9943 W

text: metagenome

text: anaerobe

text: biological replicate A

text: biofilm scrubbing with a syringe

text: filtration on 0.22 µm filter

text: 40 mL

text: deep


text: live

text: Metagenome or environmental

text: French Guiana: Petit Saut reservoir

text: Zone 2, tree B, deep

text: 4.9311 N 52.9943 W

text: metagenome

text: anaerobe

text: biological replicate B

text: biofilm scrubbing with a syringe

text: filtration on 0.22 µm filter

text: 40 mL

text: deep


text: live

text: Metagenome or environmental

text: French Guiana: Petit Saut reservoir

text: Zone 2, tree C, deep

text: 4.9311 N 52.9943 W

text: metagenome

text: anaerobe

text: biological replicate C

text: biofilm scrubbing with a syringe

text: filtration on 0.22 µm filter

text: 40 mL

text: deep


text: live

text: Metagenome or environmental

text: French Guiana: Petit Saut reservoir

text: Zone 3, tree A, deep

text: 4.9242 N 53.0435 W

text: metagenome

text: anaerobe

text: biological replicate A

text: biofilm scrubbing with a syringe

text: filtration on 0.22 µm filter

text: 40 mL

text: deep