text: False

text: True

text: grams

text: Box 40_A01_A02

text: False

text: False

text: False

text: Several times weekly

text: False

text: Mother's milk diet

text: Omnivorous diet

text: False

text: False

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Weekly

text: False

text: False

text: Not in past year

text: Several times weekly

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: Oregon State University

text: live

text: False

text: False

text: ng/uL

text: uL

text: Several times weekly

text: Rarely

text: True

text: Human

text: False

text: Several times weekly

text: False

text: False

text: False

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Daily

text: Unknown racial group

text: Several times weekly

text: Several times weekly

text: Several times weekly

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water from city

text: HR

text: Several times weekly

text: Weekly

text: Weekly

text: Never

text: Weekly

text: Weekly

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


status: PUBLIC

text: Poor diet die to sensory processing disorder, c section, antibiotics at birth

tag: attribute

text: More than 200000

text: True

text: True

text: Matched with metadata entry ASD_T2_Family_125

text: g

text: SBIR 33_E4

text: True

text: False

text: Developmentally delayed (autism)

text: False

text: Difficulty with conversation

text: Never

text: False

text: Mixed infant formula and mother's milk diet

text: Vegan diet

text: True

text: Try gluten free dairy free but do not know if for certain if is lactose intolerant. Very selective eats only a few things

text: True

text: False

characteristic: External Id

text: M3_125_P2_A_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: DNA extraction using KingFisher and Zymo DNA clean up kit

text: glass

text: gDNA

text: Qiagen MagAttract PowerMicrobiome DNA/RNA Kit #27600-4-KF. ZR-96 DNA Clean-up kit Zymo #D4017, D4018

text: DNA Extraction for the M3 Project

text: This protocol is developed to accommodate the fact that for M3 project, many of the stool samples in Second Genome preservative were watery. The protocol is modified based on the SOP-SL-100 with additional steps for sample pre-processing and final clean-up.

text: KingFisher ClearMag bead-based combined with Zymo column-based clean up

text: Little or no eye contact

text: Never

text: False

text: False

text: 6 months):Week

text: Daily

text: Daily

text: Tends to have constipation

text: False

text: True

text: False

text: False

text: False

text: True

text: Continuous

text: False

text: Case (disease status)

text: True

text: Oregon State University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Imitates others when prompted

text: True

text: False

text: Phrase speech

text: ng/uL

text: uL

text: Daily

text: Never

text: Constipation & Pain (symptom)

text: True

text: Human

text: False

text: Several times weekly

text: False

text: False

text: False

text: Q5 Hot Start High-Fidelity 2X Master Mix

text: MAD LAB 16S V4 Library Preparation (20 cycles)

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: True

text: True

text: True

text: True

text: False

text: True

text: Rarely

text: Rarely

text: Never

text: Never

text: Daily

text: Caucasian

text: Never

text: Sometimes

text: Highly sensitive to typical sounds

text: Weekly

text: Never

text: Mild self-harming behavior

text: False

text: Some sleep difficulties

text: False

text: Drinking water from well

text: HR

text: Less than 1

text: Never

text: Never

text: Understands most words

text: Several times weekly

text: Daily

text: Several time weekly

text: Weekly

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: More than 200000

text: False

text: True

text: Matched with metadata entry NT_T2_Family_125

text: g

text: SBIR 33_E5

text: True

text: False

text: False

text: Rarely

text: False

text: Vegetarian diet

text: False

text: False

text: False

text: M3_125_P2_N_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Never

text: False

text: False

text: 6 months):Week

text: Daily

text: Daily

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: False

text: ng/uL

text: uL

text: Several times weekly

text: Never

text: False

text: Human

text: False

text: Daily

text: False

text: False

text: False

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: True

text: True

text: True

text: True

text: False

text: True

text: Several times weekly

text: Caucasian

text: Never

text: Never

text: False

text: False

text: Drinking water from well

text: HR

text: Rarely

text: Never

text: Several times weekly

text: Never

text: Several time weekly

text: Several times weekly

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: True

text: True

text: Matched with metadata entry ASD_T3_Family_065

text: g

text: SBIR Box 10_C5

text: False

text: False

text: 3-4 meals per week

text: Some developmental delays

text: False

text: Cannot have a conversation

text: Never

text: Never or less than once per week

text: False

text: Infant formula diet

text: 7-10 meals per week

text: Omnivorous diet

text: True

text: Egg and peanut free based on sensitivity panel, dye free and limited preservatives

text: True

text: False

text: M3_065_P2_A_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Some eye contact

text: Never

text: False

text: False

text: Not in past year

text: Daily

text: Several times weekly

text: 7-10 meals per week

text: Tends to have constipation

text: False

text: False

text: False

text: False

text: True

text: True

text: Continuous

text: True

text: Case (disease status)

text: True

text: Oregon State University

text: live

text: Imitates others when prompted

text: True

text: True

text: Little to no speech

text: ng/uL

text: uL

text: Daily

text: Rarely

text: Almost every meal

text: Diarrhea & Pain (symptom)

text: True

text: Human

text: False

text: Daily

text: False

text: False

text: True

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: True

text: True

text: False

text: False

text: False

text: True

text: Rarely

text: Never

text: Never

text: Never

text: Daily

text: False

text: Caucasian & Asian race

text: Never

text: No elevated anxiety

text: False

text: Sometimes

text: Not bothered by typical sounds

text: Rarely

text: Never

text: No self-injurious behavior

text: False

text: Some sleep difficulties

text: False

text: Drinking water from city

text: HR

text: 7-10 meals per week

text: Less than 1

text: Sampled from diaper

text: Weekly

text: Rarely

text: False

text: Understands most words

text: Several times weekly

text: 3-4 meals per week

text: Daily

text: Daily

text: Weekly

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: True

text: True

text: Matched with metadata entry NT_T3_Family_065

text: g

text: SBIR Box 10_D1

text: False

text: False

text: 3-4 meals per week

text: False

text: Never

text: Never or less than once per week

text: False

text: Mother's milk diet

text: 7-10 meals per week

text: Omnivorous/avoids red meat diet

text: False

text: False

text: False

text: M3_065_P2_N_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Never

text: False

text: False

text: Not in past year

text: Daily

text: Several times weekly

text: 7-10 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: True

text: ng/uL

text: uL

text: Daily

text: Never

text: 7-10 meals per week

text: True

text: Human

text: False

text: Daily

text: False

text: False

text: True

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: True

text: True

text: False

text: False

text: False

text: True

text: Rarely

text: False

text: Caucasian & Asian race

text: Never

text: No elevated anxiety

text: False

text: Rarely

text: Never

text: False

text: False

text: Drinking water from city

text: HR

text: 7-10 meals per week

text: Sampled from diaper

text: Weekly

text: Never

text: False

text: Several times weekly

text: 3-4 meals per week

text: Never

text: Never

text: Weekly

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: female

text: stool

text: Human sample from Homo sapiens


text: True

text: True

text: Matched with metadata entry ASD_T1_Family_065

text: g

text: SBIR Box 12_E3

text: False

text: False

text: 3-4 meals per week

text: Some developmental delays

text: False

text: Cannot have a conversation

text: Never

text: Never or less than once per week

text: False

text: Infant formula diet

text: 7-10 meals per week

text: Omnivorous diet

text: True

text: True

text: False

text: M3_065_P1_A_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Some eye contact

text: Never

text: False

text: False

text: Not in past year

text: Daily

text: Several times weekly

text: 7-10 meals per week

text: Tends to have constipation

text: False

text: False

text: False

text: False

text: True

text: True

text: Continuous

text: True

text: Case (disease status)

text: True

text: Oregon State University

text: live

text: Imitates others when prompted

text: True

text: True

text: Little to no speech

text: ng/uL

text: uL

text: Daily

text: Rarely

text: Almost every meal

text: Diarrhea & Pain (symptom)

text: True

text: Human

text: False

text: Daily

text: False

text: False

text: True

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: True

text: True

text: False

text: False

text: False

text: True

text: Rarely

text: Never

text: Never

text: Never

text: Daily

text: False

text: Caucasian & Asian race

text: Never

text: No elevated anxiety

text: False

text: Sometimes

text: Not bothered by typical sounds

text: Rarely

text: Never

text: No self-injurious behavior

text: False

text: Some sleep difficulties

text: False

text: Drinking water from city

text: HR

text: 7-10 meals per week

text: Less than 1

text: Sampled from diaper

text: Weekly

text: Rarely

text: False

text: Understands most words

text: Several times weekly

text: 3-4 meals per week

text: Daily

text: Daily

text: Weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: True

text: True

text: Matched with metadata entry NT_T1_Family_065

text: g

text: SBIR Box 12_E4

text: False

text: False

text: 3-4 meals per week

text: False

text: Never

text: Never or less than once per week

text: False

text: Mother's milk diet

text: 7-10 meals per week

text: Omnivorous/avoids red meat diet

text: False

text: False

text: False

text: M3_065_P1_N_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Never

text: False

text: False

text: Not in past year

text: Daily

text: Several times weekly

text: 7-10 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: True

text: ng/uL

text: uL

text: Daily

text: Never

text: 7-10 meals per week

text: True

text: Human

text: False

text: Daily

text: False

text: False

text: True

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: True

text: True

text: False

text: False

text: False

text: True

text: Rarely

text: False

text: Caucasian & Asian race

text: Never

text: No elevated anxiety

text: False

text: Rarely

text: Never

text: False

text: False

text: Drinking water from city

text: HR

text: 7-10 meals per week

text: Sampled from diaper

text: Weekly

text: Never

text: False

text: Several times weekly

text: 3-4 meals per week

text: Never

text: Never

text: Weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: female

text: stool

text: Human sample from Homo sapiens


text: True

text: True

text: Matched with metadata entry ASD_T2_Family_065

text: g

text: SBIR Box 16_A5

text: False

text: False

text: 3-4 meals per week

text: Some developmental delays

text: False

text: Cannot have a conversation

text: Never

text: Never or less than once per week

text: False

text: Infant formula diet

text: 7-10 meals per week

text: Omnivorous diet

text: True

text: True

text: False

text: M3_065_P3_A_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Some eye contact

text: Never

text: False

text: False

text: Not in past year

text: Daily

text: Several times weekly

text: 7-10 meals per week

text: Tends to have constipation

text: False

text: False

text: False

text: False

text: True

text: True

text: Continuous

text: True

text: Case (disease status)

text: True

text: Oregon State University

text: live

text: Imitates others when prompted

text: True

text: True

text: Little to no speech

text: ng/uL

text: uL

text: Daily

text: Rarely

text: Almost every meal

text: Diarrhea & Pain (symptom)

text: True

text: Human

text: False

text: Daily

text: False

text: False

text: True

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: True

text: True

text: False

text: False

text: False

text: True

text: Rarely

text: Never

text: Never

text: Never

text: Daily

text: False

text: Caucasian & Asian race

text: Never

text: No elevated anxiety

text: False

text: Sometimes

text: Not bothered by typical sounds

text: Rarely

text: Never

text: No self-injurious behavior

text: False

text: Some sleep difficulties

text: False

text: Drinking water from city

text: HR

text: 3-4 meals per week

text: Less than 1

text: Sampled from diaper

text: Weekly

text: Rarely

text: False

text: Understands most words

text: Several times weekly

text: 3-4 meals per week

text: Daily

text: Daily

text: Weekly

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: True

text: True

text: Matched with metadata entry NT_T2_Family_065

text: g

text: SBIR Box 16_B1

text: False

text: False

text: 7-10 meals per week

text: False

text: Never

text: Never or less than once per week

text: False

text: Mother's milk diet

text: 3-4 meals per week

text: Omnivorous/avoids red meat diet

text: False

text: False

text: False

text: M3_065_P3_N_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Never

text: False

text: False

text: Not in past year

text: Daily

text: Several times weekly

text: 7-10 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: True

text: ng/uL

text: uL

text: Daily

text: Never

text: 7-10 meals per week

text: True

text: Human

text: False

text: Daily

text: False

text: False

text: True

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: True

text: True

text: False

text: False

text: False

text: True

text: Rarely

text: False

text: Caucasian & Asian race

text: Never

text: No elevated anxiety

text: False

text: Rarely

text: Never

text: False

text: False

text: Drinking water from city

text: HR

text: 3-4 meals per week

text: Sampled from diaper

text: Weekly

text: Never

text: False

text: Several times weekly

text: 3-4 meals per week

text: Never

text: Never

text: Weekly

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: female

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry NT_T1_Family_089

text: g

text: SBIR Box 20_A2

text: False

text: 3-4 meals per week

text: False

text: Daily

text: Almost every meal

text: True

text: 7-10 meals per week

text: Omnivorous diet

text: False

text: True

text: False

text: M3_089_P1_N_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Never

text: False

text: True

text: Not in past year

text: Daily

text: 7-10 meals per week

text: Tends to have constipation

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: Oregon State University

text: live

text: False

text: False

text: ng/uL

text: uL

text: Daily

text: Weekly

text: Almost every meal

text: True

text: Human

text: True

text: Daily

text: False

text: False

text: False

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Rarely

text: False

text: Caucasian

text: Several times weekly

text: Somewhat elevated anxiety

text: True

text: Never

text: Never

text: False

text: False

text: Drinking water is bottled

text: Tree nut (food) & Gluten-containing grain

text: HR

text: 3-4 meals per week

text: Sampled from diaper

text: Never

text: Rarely

text: False

text: Several times weekly

text: 7-10 meals per week

text: Rarely

text: Daily

text: Several times weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry NT_T2_Family_089

text: g

text: SBIR Box 24_D3

text: False

text: 7-10 meals per week

text: False

text: Daily

text: Almost every meal

text: False

text: Mixed infant formula and mother's milk diet

text: Almost every meal

text: Omnivorous diet

text: False

text: True

text: False

text: M3_089_P2_N_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Never

text: True

text: True

text: Not in past year

text: Daily

text: 7-10 meals per week

text: Tends to have constipation

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: Oregon State University

text: live

text: False

text: False

text: ng/uL

text: uL

text: Daily

text: Weekly

text: Almost every meal

text: True

text: Human

text: True

text: Daily

text: False

text: False

text: False

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Rarely

text: False

text: Caucasian

text: Several times weekly

text: No elevated anxiety

text: True

text: Never

text: Never

text: False

text: False

text: Drinking water is bottled

text: HR

text: 3-4 meals per week

text: Sampled from diaper

text: Never

text: Rarely

text: False

text: Several times weekly

text: 3-4 meals per week

text: Rarely

text: Daily

text: Several times weekly

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: gluten causes loose stools; he gets up throughout the night asking for food and seems to never get 'full'

text: False

text: False

text: Matched with metadata entry ASD_T1_Family_138

text: g

text: SBIR Box 24_E5

text: False

text: False

text: Almost every meal

text: Developmentally delayed (not clearly autism)

text: False

text: Able to have conversation

text: Rarely

text: Never or less than once per week

text: False

text: Mother's milk diet

text: Almost every meal

text: Omnivorous diet

text: True

text: we limit gluten, processed sugar and any form of preservative

text: False

text: False

text: M3_138_P3_A_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: DNA extraction using KingFisher and Zymo DNA clean up kit

text: glass

text: gDNA

text: Qiagen MagAttract PowerMicrobiome DNA/RNA Kit #27600-4-KF. ZR-96 DNA Clean-up kit Zymo #D4017, D4018

text: DNA Extraction for the M3 Project

text: Consistent eye contact

text: Several times weekly

text: False

text: False

text: Not in past year

text: Daily

text: Daily

text: Almost every meal

text: Tends to have diarrhea

text: False

text: True

text: False

text: False

text: False

text: True

text: Continuous

text: False

text: Case (disease status)

text: True

text: Oregon State University

text: live

text: Imitates actions or gestures of others

text: True

text: False

text: Able to speak fluently

text: ng/uL

text: uL

text: Daily

text: Weekly

text: Almost every meal

text: Diarrhea with vomiting

text: False

text: Human

text: True

text: Rarely

text: False

text: False

text: False

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: False

text: True

text: False

text: False

text: False

text: True

text: Regularly

text: Regularly

text: Regularly

text: Sometimes

text: Never

text: False

text: Caucasian

text: Never

text: No elevated anxiety

text: False

text: Never

text: Sensitive to typical sounds

text: Weekly

text: Rarely

text: No self-injurious behavior

text: False

text: Constant sleep difficulties

text: False

text: Drinking water is filtered

text: HR

text: Almost every meal

text: Rarely

text: Never

text: Yes, I used the toilet cover when collecting samples from both of my children

text: True

text: Understands nearly all words

text: Several times weekly

text: 7-10 meals per week

text: Never

text: Never

text: Several times weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: False

text: Matched with metadata entry NT_T1_Family_138

text: g

text: SBIR Box 25_A1

text: False

text: False

text: 7-10 meals per week

text: False

text: Never

text: Never or less than once per week

text: False

text: Mother's milk diet

text: Almost every meal

text: Omnivorous diet

text: True

text: we restrict dairy and gluten for his allergies

text: False

text: False

text: M3_138_P3_N_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: This protocol is developed to accommodate the fact that for M3 project, many of the stool samples in Second Genome preservative were watery. The protocol is modified based on the SOP-SL-100 with additional steps for sample pre-processing and final clean-up.

text: KingFisher ClearMag bead-based combined with Zymo column-based clean up

text: Several times weekly

text: False

text: False

text: Not in past year

text: Daily

text: Almost every meal

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: False

text: Oregon State University

text: live

text: True

text: False

text: ng/uL

text: uL

text: Daily

text: Weekly

text: Almost every meal

text: False

text: Human

text: False

text: Rarely

text: False

text: True

text: False

text: Q5 Hot Start High-Fidelity 2X Master Mix

text: MAD LAB 16S V4 Library Preparation (20 cycles)

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: False

text: True

text: False

text: False

text: False

text: True

text: Never

text: False

text: Caucasian

text: Never

text: No elevated anxiety

text: True

text: Weekly

text: Weekly

text: False

text: False

text: Drinking water is filtered

text: HR

text: Almost every meal

text: Rarely

text: Never

text: True

text: Daily

text: Almost every meal

text: Never

text: Never

text: Several times weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: More than 200000

text: True

text: True

text: Matched with metadata entry ASD_T1_Family_038

text: g

text: SBIR Box 3_F5

text: True

text: True

text: 7-10 meals per week

text: False

text: Limited conversation ability

text: Never

text: Never or less than once per week

text: False

text: Infant formula diet

text: Almost every meal

text: Omnivorous diet

text: True

text: Soy free, egg free, corn free, low carb diet

text: True

text: False

text: M3_038_P2_A_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Some eye contact

text: Never

text: False

text: False

text: Not in past year

text: Weekly

text: Several times weekly

text: Almost every meal

text: Tends to have diarrhea

text: False

text: True

text: False

text: False

text: False

text: True

text: Continuous

text: False

text: Case (disease status)

text: True

text: Oregon State University

text: live

text: Imitates actions or gestures of others

text: True

text: False

text: Phrase speech

text: ng/uL

text: uL

text: Daily

text: Weekly

text: Almost every meal

text: Diarrhea & Constipation

text: False

text: Human

text: True

text: Daily

text: False

text: False

text: True

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: False

text: True

text: False

text: False

text: False

text: True

text: Regularly

text: Sometimes

text: Sometimes

text: Regularly

text: Daily

text: False

text: Caucasian

text: Rarely

text: No elevated anxiety

text: False

text: Never

text: Not bothered by typical sounds

text: Weekly

text: Rarely

text: No self-injurious behavior

text: False

text: Constant sleep difficulties

text: False

text: Drinking water is filtered

text: Dairy food

text: HR

text: Almost every meal

text: Weekly

text: Never

text: True

text: Understands nearly all words

text: Several times weekly

text: Almost every meal

text: Daily

text: Never

text: Several times weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: More than 200000

text: True

text: True

text: Matched with metadata entry NT_T1_Family_038

text: g

text: SBIR Box 3_F6

text: True

text: True

text: 7-10 meals per week

text: False

text: Weekly

text: Almost every meal

text: False

text: Infant formula diet

text: 7-10 meals per week

text: Omnivorous diet

text: False

text: False

text: False

text: M3_038_P2_N_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Never

text: False

text: False

text: Not in past year

text: Daily

text: Daily

text: Almost every meal

text: Tends to have normal bowel function

text: False

text: True

text: False

text: False

text: False

text: True

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: False

text: ng/uL

text: uL

text: Several times weekly

text: Weekly

text: Almost every meal

text: Constipation

text: True

text: Human

text: False

text: Daily

text: False

text: False

text: True

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: False

text: True

text: False

text: False

text: False

text: True

text: Daily

text: False

text: Caucasian

text: Weekly

text: No elevated anxiety

text: False

text: Weekly

text: Never

text: False

text: False

text: Drinking water is filtered

text: HR

text: 7-10 meals per week

text: Less than 1

text: Weekly

text: Never

text: True

text: Daily

text: 7-10 meals per week

text: Never

text: Never

text: Daily

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: female

text: stool

text: Human sample from Homo sapiens


text: Poor diet die to sensory processing disorder, c section, antibiotics at birth

text: More than 200000

text: True

text: True

text: Matched with metadata entry ASD_T1_Family_125

text: g

text: SBIR BOX 32_C3

text: True

text: False

text: Developmentally delayed (autism)

text: False

text: Difficulty with conversation

text: Never

text: False

text: Mixed infant formula and mother's milk diet

text: Vegan diet

text: True

text: Try gluten free dairy free but do not know if for certain if is lactose intolerant. Very selective eats only a few things

text: True

text: False

text: M3_125_P1_A_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Little or no eye contact

text: Never

text: False

text: False

text: 6 months):Week

text: Daily

text: Daily

text: Tends to have constipation

text: False

text: True

text: False

text: False

text: False

text: True

text: Continuous

text: False

text: Case (disease status)

text: True

text: Oregon State University

text: live

text: Imitates others when prompted

text: True

text: False

text: Phrase speech

text: ng/uL

text: uL

text: Daily

text: Never

text: Constipation & Pain (symptom)

text: True

text: Human

text: False

text: Several times weekly

text: False

text: False

text: False

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: True

text: True

text: True

text: True

text: False

text: True

text: Rarely

text: Rarely

text: Never

text: Never

text: Daily

text: Caucasian

text: Never

text: Sometimes

text: Highly sensitive to typical sounds

text: Weekly

text: Never

text: Mild self-harming behavior

text: False

text: Some sleep difficulties

text: False

text: Drinking water from well

text: HR

text: Less than 1

text: Never

text: Never

text: Understands most words

text: Several times weekly

text: Daily

text: Several time weekly

text: Weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: More than 200000

text: False

text: True

text: Matched with metadata entry NT_T1_Family_125

text: g

text: SBIR BOX 32_C4

text: True

text: False

text: False

text: Rarely

text: False

text: Vegetarian diet

text: False

text: False

text: False

text: M3_125_P1_N_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Never

text: False

text: False

text: 6 months):Week

text: Daily

text: Daily

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: False

text: ng/uL

text: uL

text: Several times weekly

text: Never

text: False

text: Human

text: False

text: Daily

text: False

text: False

text: False

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: True

text: True

text: True

text: True

text: False

text: True

text: Several times weekly

text: Caucasian

text: Never

text: Never

text: False

text: False

text: Drinking water from well

text: HR

text: Rarely

text: Never

text: Several times weekly

text: Never

text: Several time weekly

text: Several times weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: More than 200000

text: True

text: False

text: Matched with metadata entry:ASD_T1_Family_131

text: g

text: SBIR BOX 32_D2

text: False

text: False

text: Uncertain about behavioral development

text: Able to have conversation

text: Daily

text: Mother's milk diet

text: Omnivorous diet

text: False

text: False

text: M3_131_P1_A_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: DNA extraction using KingFisher and Zymo DNA clean up kit

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Some eye contact

text: Never

text: Not in past year

text: Daily

text: Tends to have constipation

text: False

text: False

text: False

text: False

text: False

text: False

text: No issues

text: False

text: Case (disease status)

text: Oregon State University

text: live

text: Imitates actions or gestures of others

text: False

text: False

text: Able to speak fluently

text: ng/uL

text: uL

text: Daily

text: Daily

text: False

text: Human

text: False

text: Rarely

text: False

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Regularly

text: Regularly

text: Regularly

text: Sometimes

text: Rarely

text: Caucasian

text: Never

text: Weekly

text: Regularly

text: Sensitive to typical sounds

text: Rarely

text: Rarely

text: No self-injurious behavior

text: False

text: Healthy sleep pattern

text: False

text: Drinking water from city

text: HR

text: Less than 1

text: Several times weekly

text: Never

text: Traveled to Russia in July 2017 for vacation (4 week stay)

text: Russian federation

text: Understands nearly all words

text: Several times weekly

text: Never

text: Regularly

text: Several times weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: female

text: stool

text: Human sample from Homo sapiens


text: More than 200000

text: True

text: False

text: Matched with metadata entry:NT_T1_Family_131

text: g

text: SBIR BOX 32_D3

text: False

text: False

text: Several times weekly

text: Mother's milk diet

text: Omnivorous diet

text: False

text: False

text: M3_131_P1_N_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: Qiagen MagAttract PowerMicrobiome DNA/RNA Kit #27600-4-KF. ZR-96 DNA Clean-up kit Zymo #D4017, D4018

text: DNA Extraction for the M3 Project

text: Rarely

text: Not in past year

text: Several times weekly

text: Tends to have diarrhea

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: Oregon State University

text: live

text: False

text: False

text: ng/uL

text: uL

text: Daily

text: Daily

text: False

text: Human

text: False

text: Rarely

text: False

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Rarely

text: Caucasian

text: Never

text: Weekly

text: Several times weekly

text: Rarely

text: False

text: False

text: Drinking water from city

text: HR

text: Several times weekly

text: Never

text: Russian federation

text: Several times weekly

text: Never

text: Regularly

text: Several times weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: More than 200000

text: True

text: False

text: Matched with metadata entry:ASD_T2_Family_131

text: g

text: SBIR BOX 33_C2

text: False

text: False

text: 7-10 meals per week

text: Uncertain about behavioral development

text: False

text: Able to have conversation

text: Daily

text: 7-10 meals per week

text: False

text: Mother's milk diet

text: 7-10 meals per week

text: Omnivorous diet

text: False

text: False

text: M3_131_P2_A_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: This protocol is developed to accommodate the fact that for M3 project, many of the stool samples in Second Genome preservative were watery. The protocol is modified based on the SOP-SL-100 with additional steps for sample pre-processing and final clean-up.

text: Some eye contact

text: Never

text: False

text: False

text: Not in past year

text: Daily

text: 7-10 meals per week

text: Tends to have constipation

text: False

text: False

text: False

text: False

text: False

text: False

text: No issues

text: False

text: Case (disease status)

text: Oregon State University

text: live

text: Imitates actions or gestures of others

text: False

text: False

text: Able to speak fluently

text: ng/uL

text: uL

text: Daily

text: Daily

text: 7-10 meals per week

text: False

text: Human

text: False

text: Rarely

text: False

text: False

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Regularly

text: Regularly

text: Regularly

text: Sometimes

text: Rarely

text: False

text: Caucasian

text: Never

text: No elevated anxiety

text: False

text: Weekly

text: Regularly

text: Sensitive to typical sounds

text: Rarely

text: Rarely

text: No self-injurious behavior

text: False

text: Healthy sleep pattern

text: False

text: Drinking water from city

text: HR

text: 3-4 meals per week

text: Less than 1

text: Several times weekly

text: Never

text: Yes, I used the toilet cover when collecting samples from both of my children

text: True

text: Russian federation

text: Understands nearly all words

text: Several times weekly

text: 3-4 meals per week

text: Never

text: Regularly

text: Several times weekly

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: female

text: stool

text: Human sample from Homo sapiens


text: More than 200000

text: True

text: False

text: Matched with metadata entry:NT_T2_Family_131

text: g

text: SBIR BOX 33_C3

text: False

text: False

text: 7-10 meals per week

text: False

text: Several times weekly

text: 3-4 meals per week

text: False

text: Mother's milk diet

text: 7-10 meals per week

text: Omnivorous diet

text: False

text: False

text: M3_131_P2_N_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: KingFisher ClearMag bead-based combined with Zymo column-based clean up

text: Rarely

text: False

text: False

text: Not in past year

text: Several times weekly

text: 7-10 meals per week

text: Tends to have diarrhea

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: Oregon State University

text: live

text: False

text: False

text: ng/uL

text: uL

text: Daily

text: Daily

text: 7-10 meals per week

text: False

text: Human

text: False

text: Rarely

text: False

text: False

text: Q5 Hot Start High-Fidelity 2X Master Mix

text: MAD LAB 16S V4 Library Preparation (20 cycles)

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Rarely

text: False

text: Caucasian

text: Never

text: Somewhat elevated anxiety

text: False

text: Weekly

text: Several times weekly

text: Rarely

text: False

text: False

text: Drinking water from city

text: HR

text: 7-10 meals per week

text: Several times weekly

text: Never

text: True

text: Russian federation

text: Several times weekly

text: 3-4 meals per week

text: Never

text: Regularly

text: Several times weekly

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: We recently (6 months ago) figured that he regular cause him reflux issues which we gave him until he was almost 6. He had multiple ear and stomach infections during 0-6. We give him casein free goat/a2 milk now and he seems to be doing better with that.

text: More than 200000

text: False

text: True

text: Matched with metadata entry:ASD_T1_Family_187

text: g

text: SBIR BOX 33_D3

text: False

text: False

text: 7-10 meals per week

text: Developmentally delayed (not clearly autism)

text: False

text: Limited conversation ability

text: Weekly

text: 7-10 meals per week

text: False

text: Mother's milk diet

text: 7-10 meals per week

text: Vegetarian diet

text: True

text: Tend to eat only limited variety of foods.

text: False

text: M3_187_P2_A_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Consistent eye contact

text: Weekly

text: False

text: False

text: 6 months

text: Rarely

text: 3-4 meals per week

text: Tends to have constipation

text: False

text: True

text: False

text: False

text: False

text: True

text: No issues

text: False

text: Case (disease status)

text: Oregon State University

text: live

text: Imitates actions or gestures of others

text: False

text: True

text: Able to speak fluently

text: ng/uL

text: uL

text: Daily

text: Never

text: Never or less than once per week

text: Constipation

text: False

text: Human

text: False

text: Daily

text: False

text: False

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Regularly

text: Sometimes

text: Sometimes

text: Sometimes

text: Occasionally

text: False

text: Indian race

text: Rarely

text: No elevated anxiety

text: False

text: Never

text: Sometimes

text: Highly sensitive to typical sounds

text: Weekly

text: Never

text: Mild self-harming behavior

text: False

text: Some sleep difficulties

text: False

text: Drinking water is filtered

text: HR

text: 3-4 meals per week

text: Less than 1

text: Weekly

text: Never

text: True

text: Understands many words

text: Weekly

text: 3-4 meals per week

text: Occasionally

text: Occasionally

text: Daily

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: More than 200000

text: False

text: True

text: Matched with metadata entry:NT_T1_Family_187

text: g

text: SBIR BOX 33_D4

text: False

text: False

text: 7-10 meals per week

text: False

text: Several times weekly

text: 7-10 meals per week

text: False

text: Mother's milk diet

text: 3-4 meals per week

text: Vegetarian diet

text: False

text: False

text: M3_017_P2_N_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Weekly

text: False

text: False

text: Year

text: Several times weekly

text: 7-10 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: Oregon State University

text: live

text: False

text: False

text: ng/uL

text: uL

text: Daily

text: Weekly

text: 3-4 meals per week

text: True

text: Human

text: False

text: Daily

text: False

text: False

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Rarely

text: False

text: Indian race

text: Rarely

text: No elevated anxiety

text: False

text: Never

text: Weekly

text: Never

text: False

text: False

text: Drinking water is filtered

text: HR

text: 7-10 meals per week

text: Rarely

text: Never

text: True

text: Several times weekly

text: 7-10 meals per week

text: Rarely

text: Rarely

text: Daily

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: female

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry NT_T3_Family_089

text: g

text: SBIR BOX 34_C2

text: False

text: 7-10 meals per week

text: False

text: Daily

text: Almost every meal

text: False

text: Mixed infant formula and mother's milk diet

text: Almost every meal

text: Omnivorous diet

text: False

text: True

text: False

text: M3_089_P3_N_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Never

text: False

text: False

text: Not in past year

text: Daily

text: Almost every meal

text: Tends to have constipation

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: Oregon State University

text: live

text: False

text: False

text: ng/uL

text: uL

text: Daily

text: Weekly

text: Almost every meal

text: True

text: Human

text: True

text: Daily

text: False

text: False

text: False

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Rarely

text: False

text: Caucasian

text: Several times weekly

text: No elevated anxiety

text: False

text: Never

text: Never

text: False

text: False

text: Drinking water is bottled

text: Tree nut (food) & Gluten-containing grain

text: HR

text: Never or less than once per week

text: Sampled from diaper

text: Never

text: Rarely

text: False

text: Several times weekly

text: 7-10 meals per week

text: Rarely

text: Daily

text: Several times weekly

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: Poor diet die to sensory processing disorder, c section, antibiotics at birth

text: More than 200000

text: True

text: True

text: Matched with metadata entry ASD_T3_Family_125

text: g

text: SBIR BOX 34_D4

text: True

text: False

text: Developmentally delayed (autism)

text: False

text: Difficulty with conversation

text: Never

text: False

text: Vegan diet

text: True

text: Try gluten free dairy free but do not know if for certain if is lactose intolerant. Very selective eats only a few things

text: True

text: False

text: M3_125_P3_A_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: DNA extraction using KingFisher and Zymo DNA clean up kit

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Little or no eye contact

text: Never

text: False

text: False

text: 6 months):Week

text: Daily

text: Daily

text: Tends to have constipation

text: False

text: True

text: False

text: False

text: False

text: True

text: Continuous

text: False

text: Case (disease status)

text: True

text: Oregon State University

text: live

text: Imitates others when prompted

text: True

text: False

text: Phrase speech

text: ng/uL

text: uL

text: Daily

text: Never

text: Constipation & Pain (symptom)

text: True

text: Human

text: False

text: Several times weekly

text: False

text: False

text: False

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: True

text: True

text: True

text: True

text: False

text: True

text: Rarely

text: Rarely

text: Never

text: Never

text: Daily

text: Caucasian

text: Never

text: Sometimes

text: Highly sensitive to typical sounds

text: Weekly

text: Never

text: Mild self-harming behavior

text: False

text: Some sleep difficulties

text: False

text: Drinking water from well

text: HR

text: Less than 1

text: Never

text: Never

text: Understands most words

text: Several times weekly

text: Daily

text: Several time weekly

text: Weekly

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: More than 200000

text: False

text: True

text: Matched with metadata entry NT_T3_Family_125

text: g

text: SBIR BOX 34_D5

text: True

text: False

text: False

text: Rarely

text: False

text: Vegetarian diet

text: False

text: False

text: False

text: M3_125_P3_N_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: Qiagen MagAttract PowerMicrobiome DNA/RNA Kit #27600-4-KF. ZR-96 DNA Clean-up kit Zymo #D4017, D4018

text: DNA Extraction for the M3 Project

text: This protocol is developed to accommodate the fact that for M3 project, many of the stool samples in Second Genome preservative were watery. The protocol is modified based on the SOP-SL-100 with additional steps for sample pre-processing and final clean-up.

text: Never

text: False

text: False

text: 6 months):Week

text: Daily

text: Daily

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: False

text: ng/uL

text: uL

text: Several times weekly

text: Never

text: False

text: Human

text: False

text: Daily

text: False

text: False

text: False

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: True

text: True

text: True

text: True

text: False

text: True

text: Several times weekly

text: Caucasian

text: Never

text: Never

text: False

text: False

text: Drinking water from well

text: HR

text: Rarely

text: Never

text: Several times weekly

text: Never

text: Several time weekly

text: Several times weekly

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: More than 200000

text: True

text: False

text: Matched with metadata entry:ASD_T3_Family_131

text: g

text: SBIR BOX 34_E1

text: False

text: False

text: 7-10 meals per week

text: Uncertain about behavioral development

text: False

text: Able to have conversation

text: Daily

text: 7-10 meals per week

text: False

text: Mother's milk diet

text: Almost every meal

text: Omnivorous diet

text: False

text: False

text: M3_131_P3_A_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: KingFisher ClearMag bead-based combined with Zymo column-based clean up

text: Some eye contact

text: Never

text: False

text: False

text: Not in past year

text: Daily

text: 7-10 meals per week

text: Tends to have constipation

text: False

text: False

text: False

text: False

text: False

text: False

text: No issues

text: False

text: Case (disease status)

text: Oregon State University

text: live

text: Imitates actions or gestures of others

text: False

text: False

text: Able to speak fluently

text: ng/uL

text: uL

text: Daily

text: Daily

text: 3-4 meals per week

text: False

text: Human

text: False

text: Rarely

text: False

text: False

text: Q5 Hot Start High-Fidelity 2X Master Mix

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Regularly

text: Regularly

text: Regularly

text: Sometimes

text: Rarely

text: False

text: Caucasian

text: Never

text: No elevated anxiety

text: False

text: Weekly

text: Regularly

text: Sensitive to typical sounds

text: Rarely

text: Rarely

text: No self-injurious behavior

text: False

text: Healthy sleep pattern

text: False

text: Drinking water from city

text: HR

text: 3-4 meals per week

text: Less than 1

text: Several times weekly

text: Never

text: Yes, I used the toilet cover when collecting samples from both of my children

text: True

text: Traveled to Russia in July 2017 for vacation (4 week stay)

text: Russian federation

text: Understands nearly all words

text: Several times weekly

text: 3-4 meals per week

text: Never

text: Regularly

text: Several times weekly

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: female

text: stool

text: Human sample from Homo sapiens


text: More than 200000

text: True

text: False

text: Matched with metadata entry:NT_T3_Family_131

text: g

text: SBIR BOX 34_E2

text: False

text: False

text: 7-10 meals per week

text: False

text: Several times weekly

text: 7-10 meals per week

text: False

text: Mother's milk diet

text: 7-10 meals per week

text: Omnivorous diet

text: False

text: False

text: M3_131_P3_N_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Rarely

text: False

text: False

text: Not in past year

text: Several times weekly

text: 7-10 meals per week

text: Tends to have diarrhea

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: Oregon State University

text: live

text: False

text: False

text: ng/uL

text: uL

text: Daily

text: Daily

text: 7-10 meals per week

text: False

text: Human

text: False

text: Rarely

text: False

text: False

text: MAD LAB 16S V4 Library Preparation (20 cycles)

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Rarely

text: False

text: Caucasian

text: Never

text: Somewhat elevated anxiety

text: False

text: Weekly

text: Several times weekly

text: Rarely

text: False

text: False

text: Drinking water from city

text: HR

text: 3-4 meals per week

text: Several times weekly

text: Never

text: True

text: Russian federation

text: Several times weekly

text: 3-4 meals per week

text: Never

text: Regularly

text: Several times weekly

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: We recently (6 months ago) figured that he regular cause him reflux issues which we gave him until he was almost 6. He had multiple ear and stomach infections during 0-6. We give him casein free goat/a2 milk now and he seems to be doing better with that.

text: More than 200000

text: False

text: True

text: Matched with metadata entry:ASD_T2_Family_187

text: g

text: SBIR BOX 34_A5

text: False

text: False

text: 3-4 meals per week

text: Developmentally delayed (not clearly autism)

text: False

text: Limited conversation ability

text: Weekly

text: 7-10 meals per week

text: False

text: Mother's milk diet

text: 7-10 meals per week

text: Vegetarian diet

text: True

text: Tend to eat only limited variety of foods.

text: False

text: M3_187_P1_A_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Consistent eye contact

text: Weekly

text: False

text: False

text: 6 months

text: Rarely

text: 3-4 meals per week

text: Tends to have constipation

text: False

text: True

text: False

text: False

text: False

text: True

text: No issues

text: False

text: Case (disease status)

text: Oregon State University

text: live

text: Imitates actions or gestures of others

text: False

text: True

text: Able to speak fluently

text: ng/uL

text: uL

text: Daily

text: Never

text: Never or less than once per week

text: Constipation

text: False

text: Human

text: False

text: Daily

text: False

text: False

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Regularly

text: Sometimes

text: Sometimes

text: Sometimes

text: Occasionally

text: False

text: Indian race

text: Rarely

text: No elevated anxiety

text: False

text: Never

text: Sometimes

text: Highly sensitive to typical sounds

text: Weekly

text: Never

text: Mild self-harming behavior

text: False

text: Some sleep difficulties

text: False

text: Drinking water is filtered

text: HR

text: 3-4 meals per week

text: Less than 1

text: Weekly

text: Never

text: True

text: Understands many words

text: Weekly

text: 3-4 meals per week

text: Occasionally

text: Occasionally

text: Daily

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: More than 200000

text: False

text: True

text: Matched with metadata entry:NT_T2_Family_187

text: g

text: SBIR BOX 34_B1

text: False

text: False

text: 3-4 meals per week

text: False

text: Several times weekly

text: 7-10 meals per week

text: False

text: Mother's milk diet

text: 3-4 meals per week

text: Vegetarian diet

text: False

text: False

text: M3_187_P1_N_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Weekly

text: False

text: False

text: Year

text: Several times weekly

text: 7-10 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: Oregon State University

text: live

text: False

text: False

text: ng/uL

text: uL

text: Daily

text: Weekly

text: 3-4 meals per week

text: True

text: Human

text: False

text: Daily

text: False

text: False

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Rarely

text: False

text: Indian race

text: Rarely

text: No elevated anxiety

text: False

text: Never

text: Weekly

text: Never

text: False

text: False

text: Drinking water is filtered

text: HR

text: 3-4 meals per week

text: Rarely

text: Never

text: True

text: Several times weekly

text: 7-10 meals per week

text: Rarely

text: Rarely

text: Daily

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: female

text: stool

text: Human sample from Homo sapiens


text: More than 200000

text: False

text: True

text: Matched with metadata entry:ASD_T3_Family_187

text: g

text: SBIR BOX 34_D2

text: False

text: False

text: 3-4 meals per week

text: False

text: Limited conversation ability

text: Weekly

text: 3-4 meals per week

text: False

text: Mother's milk diet

text: 7-10 meals per week

text: Vegetarian diet

text: True

text: False

text: M3_187_P3_A_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Consistent eye contact

text: Weekly

text: False

text: False

text: 6 months

text: Rarely

text: 3-4 meals per week

text: Tends to have constipation

text: False

text: True

text: False

text: False

text: False

text: True

text: No issues

text: False

text: Case (disease status)

text: Oregon State University

text: live

text: Imitates actions or gestures of others

text: False

text: True

text: Able to speak fluently

text: ng/uL

text: uL

text: Daily

text: Never

text: Never or less than once per week

text: Constipation

text: False

text: Human

text: False

text: Daily

text: False

text: False

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Regularly

text: Sometimes

text: Sometimes

text: Sometimes

text: Occasionally

text: False

text: Indian race

text: Rarely

text: No elevated anxiety

text: False

text: Never

text: Sometimes

text: Highly sensitive to typical sounds

text: Weekly

text: Never

text: Mild self-harming behavior

text: False

text: Some sleep difficulties

text: False

text: Drinking water is filtered

text: HR

text: 3-4 meals per week

text: Less than 1

text: Weekly

text: Never

text: True

text: Understands many words

text: Weekly

text: 3-4 meals per week

text: Occasionally

text: Occasionally

text: Daily

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: More than 200000

text: False

text: True

text: Matched with metadata entry:NT_T3_Family_187

text: g

text: SBIR BOX 34_D3

text: False

text: False

text: 3-4 meals per week

text: False

text: Several times weekly

text: 3-4 meals per week

text: False

text: Mother's milk diet

text: Never or less than once per week

text: Vegetarian diet

text: False

text: False

text: M3_187_P3_N_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: DNA extraction using KingFisher and Zymo DNA clean up kit

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Weekly

text: False

text: False

text: Year

text: Several times weekly

text: 7-10 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: Oregon State University

text: live

text: False

text: False

text: ng/uL

text: uL

text: Daily

text: Weekly

text: 3-4 meals per week

text: True

text: Human

text: False

text: Daily

text: False

text: False

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Rarely

text: False

text: Indian race

text: Rarely

text: No elevated anxiety

text: False

text: Never

text: Weekly

text: Never

text: False

text: False

text: Drinking water is filtered

text: HR

text: 3-4 meals per week

text: Rarely

text: Never

text: True

text: Several times weekly

text: 7-10 meals per week

text: Rarely

text: Rarely

text: Daily

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: female

text: stool

text: Human sample from Homo sapiens


text: True

text: True

text: Matched with metadata entry ASD_T1_Family_025

text: g

text: SBIR BOX 35_C4

text: False

text: False

text: 7-10 meals per week

text: Developmentally delayed (autism)

text: False

text: Cannot have a conversation

text: Daily

text: Almost every meal

text: False

text: Mixed infant formula and mother's milk diet

text: 3-4 meals per week

text: Omnivorous diet

text: False

text: True

text: False

text: M3_025_P1_A_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: Qiagen MagAttract PowerMicrobiome DNA/RNA Kit #27600-4-KF. ZR-96 DNA Clean-up kit Zymo #D4017, D4018

text: DNA Extraction for the M3 Project

text: Some eye contact

text: Never

text: False

text: False

text: 6 months):Month

text: Weekly

text: Never

text: 3-4 meals per week

text: Tends to have diarrhea

text: False

text: True

text: False

text: False

text: False

text: True

text: Continuous

text: False

text: Case (disease status)

text: True

text: Oregon State University

text: live

text: Imitates actions or gestures of others

text: True

text: False

text: Single word speech

text: ng/uL

text: uL

text: Several times weekly

text: Several times weekly

text: 7-10 meals per week

text: Diarrhea & Constipation & Mucus in stool

text: True

text: Human

text: False

text: Several times weekly

text: False

text: False

text: False

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: False

text: True

text: False

text: False

text: False

text: True

text: Sometimes

text: Rarely

text: Rarely

text: Sometimes

text: Daily

text: False

text: Caucasian

text: Daily

text: Elevated anxiety

text: True

text: Regularly

text: Sensitive to typical sounds

text: Weekly

text: Never

text: Mild self-harming behavior

text: False

text: Some sleep difficulties

text: False

text: Drinking water from city & Drinking water is bottled & Drinking water is filtered

text: HR

text: 3-4 meals per week

text: Sampled from toilet collection cover

text: Daily

text: Rarely

text: False

text: Understands about half of words

text: Rarely

text: Never or less than once per week

text: Daily

text: Daily

text: Weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry NT_T1_Family_025

text: g

text: SBIR BOX 35_C5

text: False

text: False

text: False

text: Daily

text: False

text: Omnivorous diet

text: False

text: False

text: False

text: M3_025_P1_N_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: This protocol is developed to accommodate the fact that for M3 project, many of the stool samples in Second Genome preservative were watery. The protocol is modified based on the SOP-SL-100 with additional steps for sample pre-processing and final clean-up.

text: KingFisher ClearMag bead-based combined with Zymo column-based clean up

text: Never

text: False

text: False

text: 6 months):Week

text: Daily

text: Weekly

text: Tends to have constipation

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: False

text: ng/uL

text: uL

text: Several times weekly

text: Weekly

text: True

text: Human

text: False

text: Weekly

text: False

text: False

text: False

text: Q5 Hot Start High-Fidelity 2X Master Mix

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: False

text: True

text: False

text: False

text: False

text: True

text: Rarely

text: Caucasian

text: Daily

text: Weekly

text: Never

text: False

text: False

text: HR

text: Several times weekly

text: Never

text: Rarely

text: Never

text: Never

text: Weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: female

text: stool

text: Human sample from Homo sapiens


text: True

text: True

text: Matched with metadata entry ASD_T2_Family_025

text: g

text: SBIR BOX 35_D3

text: False

text: False

text: Developmentally delayed (autism)

text: False

text: Cannot have a conversation

text: Daily

text: False

text: Omnivorous diet

text: False

text: True

text: False

text: M3_025_P2_A_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Some eye contact

text: Never

text: False

text: False

text: 6 months):Month

text: Weekly

text: Never

text: Tends to have diarrhea

text: False

text: True

text: False

text: False

text: False

text: True

text: Continuous

text: False

text: Case (disease status)

text: True

text: Oregon State University

text: live

text: Imitates actions or gestures of others

text: True

text: False

text: Single word speech

text: ng/uL

text: uL

text: Several times weekly

text: Several times weekly

text: True

text: Human

text: False

text: Several times weekly

text: False

text: False

text: False

text: MAD LAB 16S V4 Library Preparation (20 cycles)

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: False

text: True

text: False

text: False

text: False

text: True

text: Sometimes

text: Rarely

text: Rarely

text: Sometimes

text: Daily

text: Caucasian

text: Daily

text: Regularly

text: Sensitive to typical sounds

text: Weekly

text: Never

text: Mild self-harming behavior

text: False

text: Some sleep difficulties

text: False

text: HR

text: Daily

text: Rarely

text: Understands about half of words

text: Rarely

text: Daily

text: Daily

text: Weekly

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry NT_T2_Family_025

text: g

text: SBIR BOX 35_D4

text: False

text: False

text: False

text: Daily

text: False

text: Omnivorous diet

text: False

text: False

text: False

text: M3_025_P2_N_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Never

text: False

text: False

text: 6 months):Week

text: Daily

text: Weekly

text: Tends to have constipation

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: False

text: ng/uL

text: uL

text: Several times weekly

text: Weekly

text: True

text: Human

text: False

text: Weekly

text: False

text: False

text: False

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: False

text: True

text: False

text: False

text: False

text: True

text: Rarely

text: Caucasian

text: Daily

text: Weekly

text: Never

text: False

text: False

text: HR

text: Several times weekly

text: Never

text: Rarely

text: Never

text: Never

text: Weekly

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: female

text: stool

text: Human sample from Homo sapiens


text: True

text: True

text: Matched with metadata entry ASD_T3_Family_025

text: g

text: SBIR BOX 35_E4

text: False

text: False

text: Developmentally delayed (autism)

text: False

text: Cannot have a conversation

text: Daily

text: False

text: Omnivorous diet

text: False

text: True

text: False

text: M3_025_P3_A_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Some eye contact

text: Never

text: False

text: False

text: 6 months):Month

text: Weekly

text: Never

text: Tends to have diarrhea

text: False

text: True

text: False

text: False

text: False

text: True

text: Continuous

text: False

text: Case (disease status)

text: True

text: Oregon State University

text: live

text: Imitates actions or gestures of others

text: True

text: False

text: Single word speech

text: ng/uL

text: uL

text: Several times weekly

text: Several times weekly

text: True

text: Human

text: False

text: Several times weekly

text: False

text: False

text: False

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: False

text: True

text: False

text: False

text: False

text: True

text: Sometimes

text: Rarely

text: Rarely

text: Sometimes

text: Daily

text: Caucasian

text: Daily

text: Regularly

text: Sensitive to typical sounds

text: Weekly

text: Never

text: Mild self-harming behavior

text: False

text: Some sleep difficulties

text: False

text: HR

text: Daily

text: Rarely

text: Understands about half of words

text: Rarely

text: Daily

text: Daily

text: Weekly

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry NT_T3_Family_025

text: g

text: SBIR BOX 35_E5

text: False

text: False

text: False

text: Daily

text: False

text: Omnivorous diet

text: False

text: False

text: False

text: M3_025_P3_N_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Never

text: False

text: False

text: 6 months):Week

text: Daily

text: Weekly

text: Tends to have constipation

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: False

text: ng/uL

text: uL

text: Several times weekly

text: Weekly

text: True

text: Human

text: False

text: Weekly

text: False

text: False

text: False

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: False

text: True

text: False

text: False

text: False

text: True

text: Rarely

text: Caucasian

text: Daily

text: Weekly

text: Never

text: False

text: False

text: HR

text: Several times weekly

text: Never

text: Rarely

text: Never

text: Never

text: Weekly

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: female

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry ASD_T1_Family_044

text: g

text: SBIR BOX 35_D5

text: True

text: True

text: Developmentally delayed (not clearly autism)

text: Cannot have a conversation

text: Daily

text: Omnivorous diet

text: False

text: True

text: False

text: M3_044_P1_A_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Some eye contact

text: Never

text: 6 months

text: Daily

text: Never

text: Tends to have constipation

text: False

text: False

text: False

text: False

text: True

text: True

text: Sometimes

text: False

text: Case (disease status)

text: True

text: Oregon State University

text: live

text: Does not imitate others

text: True

text: 0 (non-ASD)

text: False

text: Little to no speech

text: ng/uL

text: uL

text: Daily

text: Several times weekly

text: Constipation

text: True

text: Human

text: False

text: Daily

text: False

text: True

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: True

text: True

text: False

text: False

text: False

text: True

text: Rarely

text: Never

text: Never

text: Sometimes

text: Never

text: Caucasian

text: Rarely

text: Regularly

text: Sensitive to typical sounds

text: Several times weekly

text: Several times weekly

text: Mild self-harming behavior

text: False

text: Some sleep difficulties

text: False

text: HR

text: Less than 1

text: Daily

text: Several times weekly

text: Understands few or no words

text: Daily

text: Never

text: Never

text: Several times weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry NT_T1_Family_044

text: g

text: SBIR BOX 35_E1

text: True

text: True

text: Never

text: Omnivorous diet

text: False

text: False

text: False

text: M3_044_P1_N_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: DNA extraction using KingFisher and Zymo DNA clean up kit

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Never

text: 6 months

text: Rarely

text: Daily

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: 0 (non-ASD)

text: False

text: ng/uL

text: uL

text: Daily

text: Weekly

text: True

text: Human

text: False

text: Daily

text: False

text: True

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: True

text: True

text: False

text: False

text: False

text: True

text: Never

text: Caucasian

text: Rarely

text: Several times weekly

text: Weekly

text: False

text: False

text: HR

text: Several times weekly

text: Several times weekly

text: Daily

text: Never

text: Never

text: Weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: We try to limit grains but make snacks and foods with cassava flour, tapioca starch, chickpea flour, potato starch etc. which can all be starchy.

text: False

text: True

text: Matched with metadata entry:ASD_T2_Family_157

text: g

text: SBIR BOX 35_E2

text: False

text: False

text: 3-4 meals per week

text: Met all developmental milestones

text: False

text: Limited conversation ability

text: Never

text: Never or less than once per week

text: False

text: Mother's milk diet

text: 3-4 meals per week

text: Vegetarian diet

text: True

text: limited grains and avoids high ox foods as much as possible

text: False

text: M3_157_P1_A_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Some eye contact

text: Never

text: False

text: False

text: Not in past year

text: Several times weekly

text: Almost every meal

text: Tends to have diarrhea

text: False

text: False

text: False

text: False

text: False

text: False

text: No issues

text: False

text: Case (disease status)

text: Oregon State University

text: live

text: Imitates actions or gestures of others

text: False

text: True

text: Able to speak fluently

text: ng/uL

text: uL

text: Several times weekly

text: Several times weekly

text: 3-4 meals per week

text: True

text: Human

text: True

text: Daily

text: False

text: False

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Regularly

text: Sometimes

text: Sometimes

text: Sometimes

text: Regularly

text: True

text: Caucasian

text: Never

text: Somewhat elevated anxiety

text: False

text: Never

text: Never

text: Sensitive to typical sounds

text: Weekly

text: Never

text: No self-injurious behavior

text: False

text: Some sleep difficulties

text: False

text: Drinking water is bottled & Drinking water is filtered

text: Tree nut (food) & Dairy food & Gluten-containing grain & Soybean (food)

text: HR

text: 3-4 meals per week

text: Pee

text: Sampled from diaper

text: Never

text: Never

text: False

text: Turks and Caicos vacation

text: Turks and Caicos Islands

text: Understands many words

text: Rarely

text: Never or less than once per week

text: Regularly

text: Regularly

text: Several times weekly

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: We make snacks and food from cassava flour, chickpea flour, tapioca starch, potato starch, which can be starchy flours/grains

text: False

text: True

text: Matched with metadata entry:NT_T2_Family_157

text: g

text: SBIR BOX 35_E3

text: False

text: False

text: 3-4 meals per week

text: False

text: Never

text: Never or less than once per week

text: False

text: Mother's milk diet

text: 7-10 meals per week

text: Omnivorous/avoids red meat diet

text: False

text: False

text: M3_157_P1_N_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: Qiagen MagAttract PowerMicrobiome DNA/RNA Kit #27600-4-KF. ZR-96 DNA Clean-up kit Zymo #D4017, D4018

text: DNA Extraction for the M3 Project

text: This protocol is developed to accommodate the fact that for M3 project, many of the stool samples in Second Genome preservative were watery. The protocol is modified based on the SOP-SL-100 with additional steps for sample pre-processing and final clean-up.

text: Never

text: False

text: False

text: Not in past year

text: Weekly

text: Almost every meal

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: Oregon State University

text: live

text: False

text: True

text: ng/uL

text: uL

text: Several times weekly

text: Several times weekly

text: 7-10 meals per week

text: True

text: Human

text: True

text: Several times weekly

text: False

text: False

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Regularly

text: False

text: Caucasian

text: Never

text: Elevated anxiety

text: False

text: Never

text: Weekly

text: Never

text: False

text: False

text: HR

text: 7-10 meals per week

text: Sampled from diaper

text: Never

text: Never

text: False

text: Turks and Caicos vacation

text: Turks and Caicos Islands

text: Rarely

text: Never or less than once per week

text: Regularly

text: Regularly

text: Several times weekly

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry:ASD_T1_Family_157

text: g

text: SBIR BOX 35_C2

text: False

text: False

text: Never or less than once per week

text: Met all developmental milestones

text: False

text: Limited conversation ability

text: Never

text: Never or less than once per week

text: False

text: Mother's milk diet

text: 3-4 meals per week

text: Vegetarian diet

text: True

text: False

text: Diaper/cover

text: M3_157_P3_A_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: KingFisher ClearMag bead-based combined with Zymo column-based clean up

text: Some eye contact

text: Never

text: False

text: False

text: Not in past year

text: Several times weekly

text: Almost every meal

text: Tends to have diarrhea

text: False

text: False

text: False

text: False

text: False

text: False

text: No issues

text: False

text: Case (disease status)

text: Oregon State University

text: live

text: Imitates actions or gestures of others

text: False

text: True

text: Able to speak fluently

text: ng/uL

text: uL

text: Several times weekly

text: Several times weekly

text: 3-4 meals per week

text: True

text: Human

text: True

text: Daily

text: False

text: False

text: Q5 Hot Start High-Fidelity 2X Master Mix

text: MAD LAB 16S V4 Library Preparation (20 cycles)

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Regularly

text: Sometimes

text: Sometimes

text: Sometimes

text: Regularly

text: True

text: Caucasian

text: Never

text: Elevated anxiety

text: False

text: Never

text: Never

text: Sensitive to typical sounds

text: Weekly

text: Never

text: No self-injurious behavior

text: False

text: Some sleep difficulties

text: False

text: HR

text: 3-4 meals per week

text: Kept urinating too

text: Never

text: Never

text: Yes, I used the toilet cover, but only for my child without autism

text: True

text: Turks and Caicos vacation

text: Turks and Caicos Islands

text: Understands many words

text: Rarely

text: Never or less than once per week

text: Regularly

text: Regularly

text: Several times weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry:NT_T1_Family_157

text: g

text: SBIR BOX 35_C3

text: False

text: False

text: Never or less than once per week

text: False

text: Never

text: Never or less than once per week

text: False

text: Mother's milk diet

text: 7-10 meals per week

text: Omnivorous/avoids red meat diet

text: False

text: False

text: M3_157_P3_N_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Never

text: False

text: False

text: Not in past year

text: Weekly

text: 7-10 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: Oregon State University

text: live

text: False

text: True

text: ng/uL

text: uL

text: Several times weekly

text: Several times weekly

text: 7-10 meals per week

text: True

text: Human

text: True

text: Several times weekly

text: False

text: False

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Regularly

text: False

text: Caucasian

text: Never

text: No elevated anxiety

text: False

text: Never

text: Weekly

text: Never

text: False

text: False

text: HR

text: Almost every meal

text: Sampled from diaper

text: Never

text: Never

text: False

text: Turks and Caicos vacation

text: Turks and Caicos Islands

text: Rarely

text: Never or less than once per week

text: Regularly

text: Regularly

text: Several times weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: We eat a lot of natto, broccoli sprouts and bacon. Veggies at every meal. He loves frozen veggies.

text: False

text: True

text: Matched with metadata entry ASD_T1_Family_162

text: g

text: SBIR BOX 35_A2

text: True

text: False

text: Never or less than once per week

text: Developmentally delayed (not clearly autism)

text: False

text: Able to have conversation

text: Never

text: Never or less than once per week

text: False

text: Mixed infant formula and mother's milk diet

text: 7-10 meals per week

text: Omnivorous diet

text: False

text: False

text: False

text: He took a dump on the doorstep.

text: M3_162_P1_A_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Some eye contact

text: Weekly

text: False

text: False

text: 6 months

text: Daily

text: 7-10 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: True

text: False

text: True

text: Sometimes

text: False

text: Case (disease status)

text: Oregon State University

text: live

text: Imitates actions or gestures of others

text: False

text: False

text: Able to speak fluently

text: ng/uL

text: uL

text: Several times weekly

text: Daily

text: 7-10 meals per week

text: Diarrhea & Pain (symptom)

text: True

text: Human

text: True

text: Several times weekly

text: False

text: False

text: False

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Regularly

text: Sometimes

text: Regularly

text: Regularly

text: Never

text: False

text: Caucasian

text: Rarely

text: Elevated anxiety

text: False

text: Sometimes

text: Sensitive to typical sounds

text: Rarely

text: Several times weekly

text: Mild self-harming behavior

text: False

text: Some sleep difficulties

text: False

text: Drinking water is bottled

text: Dairy food

text: HR

text: 3-4 meals per week

text: Rarely

text: Never

text: No, I did not use the toilet cover

text: True

text: Understands nearly all words

text: Daily

text: 7-10 meals per week

text: Daily

text: Daily

text: Daily

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry NT_T1_Family_162

text: g

text: SBIR BOX 35_A3

text: True

text: False

text: Never or less than once per week

text: False

text: Never

text: Never or less than once per week

text: False

text: 7-10 meals per week

text: Omnivorous diet

text: False

text: False

text: False

text: M3_162_P1_N_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: DNA extraction using KingFisher and Zymo DNA clean up kit

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Daily

text: False

text: False

text: 6 months

text: Daily

text: 7-10 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: True

text: False

text: True

text: False

text: Control (disease status)

text: Oregon State University

text: live

text: False

text: False

text: ng/uL

text: uL

text: Daily

text: Daily

text: 7-10 meals per week

text: Diarrhea

text: True

text: Human

text: True

text: False

text: False

text: False

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Never

text: True

text: Caucasian

text: Never

text: No elevated anxiety

text: False

text: Rarely

text: Weekly

text: False

text: False

text: Drinking water is bottled

text: Dairy food

text: HR

text: 3-4 meals per week

text: It took forever. He never wanted to poo at home.

text: Never

text: Never

text: Yes, I used the toilet cover when collecting samples from both of my children

text: True

text: Daily

text: 7-10 meals per week

text: Daily

text: Daily

text: Several times weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry ASD_T2_Family_044

text: g

text: SBIR BOX 36_A3

text: True

text: True

text: False

text: Cannot have a conversation

text: Daily

text: False

text: Omnivorous diet

text: False

text: True

text: False

text: M3_044_P2_A_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Some eye contact

text: Never

text: False

text: False

text: 6 months

text: Daily

text: Never

text: Tends to have constipation

text: False

text: False

text: False

text: False

text: True

text: True

text: Sometimes

text: False

text: Case (disease status)

text: True

text: Oregon State University

text: live

text: Does not imitate others

text: True

text: 0 (non-ASD)

text: False

text: Little to no speech

text: ng/uL

text: uL

text: Daily

text: Several times weekly

text: Constipation

text: True

text: Human

text: False

text: Daily

text: False

text: False

text: True

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: True

text: True

text: False

text: False

text: False

text: True

text: Rarely

text: Never

text: Never

text: Sometimes

text: Never

text: Caucasian

text: Rarely

text: Regularly

text: Sensitive to typical sounds

text: Several times weekly

text: Several times weekly

text: Mild self-harming behavior

text: False

text: Some sleep difficulties

text: False

text: Drinking water from city & Drinking water is bottled & Drinking water is filtered

text: HR

text: Less than 1

text: Daily

text: Several times weekly

text: Understands few or no words

text: Daily

text: Never

text: Never

text: Several times weekly

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry NT_T2_Family_044

text: g

text: SBIR BOX 36_A4

text: True

text: True

text: False

text: Never

text: False

text: Omnivorous diet

text: False

text: False

text: False

text: M3_044_P2_N_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: Qiagen MagAttract PowerMicrobiome DNA/RNA Kit #27600-4-KF. ZR-96 DNA Clean-up kit Zymo #D4017, D4018

text: DNA Extraction for the M3 Project

text: This protocol is developed to accommodate the fact that for M3 project, many of the stool samples in Second Genome preservative were watery. The protocol is modified based on the SOP-SL-100 with additional steps for sample pre-processing and final clean-up.

text: Never

text: False

text: False

text: 6 months

text: Rarely

text: Daily

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: 0 (non-ASD)

text: False

text: ng/uL

text: uL

text: Daily

text: Weekly

text: True

text: Human

text: False

text: Daily

text: False

text: False

text: True

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: True

text: True

text: False

text: False

text: False

text: True

text: Never

text: Caucasian

text: Rarely

text: Several times weekly

text: Weekly

text: False

text: False

text: HR

text: Several times weekly

text: Several times weekly

text: Daily

text: Never

text: Never

text: Weekly

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry ASD_T3_Family_044

text: g

text: SBIR BOX 36_A5

text: True

text: True

text: False

text: Cannot have a conversation

text: Daily

text: False

text: Omnivorous diet

text: False

text: True

text: False

text: M3_044_P3_A_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: KingFisher ClearMag bead-based combined with Zymo column-based clean up

text: Some eye contact

text: Never

text: False

text: False

text: 6 months

text: Daily

text: Never

text: Tends to have constipation

text: False

text: False

text: False

text: False

text: True

text: True

text: Sometimes

text: False

text: Case (disease status)

text: True

text: Oregon State University

text: live

text: Does not imitate others

text: True

text: 0 (non-ASD)

text: False

text: Little to no speech

text: ng/uL

text: uL

text: Daily

text: Several times weekly

text: Constipation

text: True

text: Human

text: False

text: Daily

text: False

text: False

text: True

text: Q5 Hot Start High-Fidelity 2X Master Mix

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: True

text: True

text: False

text: False

text: False

text: True

text: Rarely

text: Never

text: Never

text: Sometimes

text: Never

text: Caucasian

text: Rarely

text: Regularly

text: Sensitive to typical sounds

text: Several times weekly

text: Several times weekly

text: Mild self-harming behavior

text: False

text: Some sleep difficulties

text: False

text: HR

text: Less than 1

text: Daily

text: Several times weekly

text: Understands few or no words

text: Daily

text: Never

text: Never

text: Several times weekly

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry NT_T3_Family_044

text: g

text: SBIR BOX 36_B1

text: True

text: True

text: False

text: Never

text: False

text: Omnivorous diet

text: False

text: False

text: False

text: M3_044_P3_N_V1 (Extract)

text: ng/microliter

text: microliter

text: uL

text: glass

text: gDNA

text: DNA Extraction for the M3 Project

text: Never

text: False

text: False

text: 6 months

text: Rarely

text: Daily

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: 0 (non-ASD)

text: False

text: ng/uL

text: uL

text: Daily

text: Weekly

text: True

text: Human

text: False

text: Daily

text: False

text: False

text: True

text: MAD LAB 16S V4 Library Preparation (20 cycles)

text: AMPure XP

text: Bead

text: PicoGreen

text: False

text: True

text: True

text: False

text: False

text: False

text: True

text: Never

text: Caucasian

text: Rarely

text: Several times weekly

text: Weekly

text: False

text: False

text: HR

text: Several times weekly

text: Several times weekly

text: Daily

text: Never

text: Never

text: Weekly

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens