text: False

text: True

text: Matched with metadata entry NT_T2_Family_008

text: gram

text: True

text: True

text: Almost every meal

text: False

text: Weekly

text: 3-4 meals per week

text: False

text: Almost every meal

text: Omnivorous diet

text: False

text: False

text: False

text: Diaper

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Never

text: False

text: False

text: Not in past year

text: Rarely

text: 3-4 meals per week

text: Tends to have constipation

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: Oregon State University

text: live

text: False

text: False

text: ng/uL

text: microliter

text: Weekly

text: Several times weekly

text: 3-4 meals per week

text: True

text: Human

text: False

text: Weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Never

text: False

text: Daily

text: No elevated anxiety

text: False

text: Several times weekly

text: Never

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water is filtered

text: HR

text: 7-10 meals per week

text: Less than 1

text: Daily

text: Daily

text: No, I did not use the toilet cover

text: True

text: Rarely

text: Never or less than once per week

text: Never

text: Never

text: Several times weekly

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


status: PUBLIC

text: My son had successful FMT since participating in the last trial. His GI issues and sleep are vastly improved. We recently learned he has congenital Lyme, though, and might need to begin abx soon.

tag: attribute

text: More than 200000

text: False

text: False

text: Matched with metadata entry ASD_T2_Family_018

text: gram

text: True

text: True

text: Never or less than once per week

text: Developmentally delayed (not clearly autism)

text: False

text: Difficulty with conversation

text: Never

text: Never or less than once per week

text: False

text: Mixed infant formula and mother's milk diet

text: 7-10 meals per week

text: Omnivorous diet

text: True

text: No grains, casein, soy, sugar, potatoes (SCD diet)

text: True

text: False

characteristic: External Id

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: MAD LAB High Throughput Extraction of DNA using the MagAttract PowerMicrobiome DNA/RNA KF Kit

text: Magnetic Beads

text: Consistent eye contact

text: Weekly

text: False

text: False

text: Not in past year

text: Monthly

text: Several times weekly

text: Almost every meal

text: Tends to have normal bowel function

text: True

text: False

text: False

text: False

text: False

text: True

text: Sometimes

text: False

text: Case (disease status)

text: True

text: Oregon State University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Imitates actions or gestures of others

text: True

text: False

text: Single word speech

text: ng/uL

text: microliter

text: Daily

text: Weekly

text: Almost every meal

text: Diarrhea

text: True

text: Human

text: True

text: Weekly

text: False

text: False

text: False

text: Q5 HotStart High Fidelity DNA Polymerase

text: static

text: Agencourt Ampure XP Beads

text: bead

text: NEB Q5 HotStart High-Fidelity 2x Master Mix

text: Invitrogen Quant-it PicoGreen dsDNA Assay kit

text: Veriti Thermocycler (Applied Biosystems)

text: False

text: True

text: False

text: False

text: False

text: False

text: True

text: Regularly

text: Sometimes

text: Rarely

text: Sometimes

text: Weekly

text: False

text: Caucasian

text: Never

text: No elevated anxiety

text: False

text: Never

text: Not bothered by typical sounds

text: Weekly

text: Weekly

text: Mild self-harming behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: Bioanalyzer is used to asses quality of pooled library. PhiX control spike-in is 20-15% of final load.

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Some sleep difficulties

text: False

text: Drinking water is bottled & Drinking water is filtered

text: HR

text: Never or less than once per week

text: Never

text: Never

text: Yes, I used the toilet cover when collecting samples from both of my children

text: True

text: Panama 1 week

text: Panama

text: Understands many words

text: Daily

text: Almost every meal

text: Daily

text: Daily

text: Never

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: More than 200000

text: False

text: False

text: Matched with metadata entry NT_T2_Family_018

text: gram

text: True

text: True

text: 3-4 meals per week

text: False

text: Weekly

text: 3-4 meals per week

text: False

text: 7-10 meals per week

text: Omnivorous diet

text: False

text: True

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Rarely

text: False

text: False

text: Not in past year

text: Monthly

text: Several times weekly

text: Almost every meal

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: False

text: ng/uL

text: microliter

text: Daily

text: Weekly

text: Almost every meal

text: True

text: Human

text: True

text: Weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: True

text: False

text: False

text: False

text: False

text: True

text: Never

text: False

text: Caucasian

text: Never

text: Somewhat elevated anxiety

text: False

text: Weekly

text: Rarely

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: HR

text: Never or less than once per week

text: Never

text: Never

text: True

text: Panama 1 week

text: Panama

text: Daily

text: Almost every meal

text: Never

text: Never

text: Never

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: female

text: stool

text: Human sample from Homo sapiens


text: My son has red cheeks, varies on brightness, and has small pimples on his ear and upper arms. We feel there may be a link with diet.

text: False

text: False

text: Matched with metadata entry ASD_T1_Family_101

text: gram

text: True

text: False

text: 7-10 meals per week

text: False

text: Difficulty with conversation

text: Rarely

text: 3-4 meals per week

text: False

text: Mother's milk diet

text: 3-4 meals per week

text: Omnivorous diet

text: False

text: True

text: False

text: In childs mini potty and other childs diaper

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Some eye contact

text: Rarely

text: False

text: False

text: Not in past year

text: Several times weekly

text: 3-4 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: Sometimes

text: False

text: Case (disease status)

text: False

text: Oregon State University

text: live

text: Imitates others when prompted

text: True

text: False

text: Phrase speech

text: ng/uL

text: microliter

text: Daily

text: Weekly

text: 3-4 meals per week

text: False

text: Human

text: False

text: Daily

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: True

text: True

text: False

text: False

text: True

text: Sometimes

text: Rarely

text: Never

text: Sometimes

text: Never

text: False

text: Caucasian

text: Never

text: No elevated anxiety

text: False

text: Never

text: Not bothered by typical sounds

text: Rarely

text: Weekly

text: No self-injurious behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Healthy sleep pattern

text: False

text: LR

text: 7-10 meals per week

text: Weekly

text: Never

text: No, I did not use the toilet cover

text: True

text: Understands most words

text: Several times weekly

text: 3-4 meals per week

text: Never

text: Never

text: Several times weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: False

text: Matched with metadata entry NT_T1_Family_101

text: gram

text: True

text: False

text: 3-4 meals per week

text: False

text: Daily

text: Almost every meal

text: False

text: Mother's milk diet

text: 3-4 meals per week

text: Omnivorous diet

text: False

text: False

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Rarely

text: False

text: False

text: Not in past year

text: Weekly

text: 3-4 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: False

text: Oregon State University

text: live

text: True

text: False

text: ng/uL

text: microliter

text: Daily

text: Several times weekly

text: 3-4 meals per week

text: False

text: Human

text: False

text: Daily

text: False

text: True

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: True

text: True

text: False

text: False

text: True

text: Never

text: False

text: Caucasian

text: Never

text: No elevated anxiety

text: True

text: Rarely

text: Weekly

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: LR

text: 7-10 meals per week

text: Sampled from diaper

text: Rarely

text: Never

text: False

text: Several times weekly

text: 3-4 meals per week

text: Never

text: Never

text: Weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: female

text: stool

text: Human sample from Homo sapiens


text: He eats yogurt once a day and prior to 4 years old would not eat any meat (but eats all meats regularly now).

text: False

text: True

text: Matched with metadata entry ASD_T1_Family_020

text: gram

text: False

text: False

text: 7-10 meals per week

text: Uncertain about behavioral development

text: False

text: Able to have conversation

text: Several times weekly

text: 7-10 meals per week

text: False

text: 7-10 meals per week

text: Omnivorous diet

text: False

text: False

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Some eye contact

text: Rarely

text: False

text: False

text: Year

text: Daily

text: Daily

text: 7-10 meals per week

text: False

text: False

text: False

text: False

text: False

text: False

text: Sometimes

text: False

text: Case (disease status)

text: True

text: Oregon State University

text: live

text: Imitates actions or gestures of others

text: True

text: False

text: Able to speak fluently

text: ng/uL

text: microliter

text: Daily

text: Rarely

text: 3-4 meals per week

text: False

text: Human

text: False

text: Several times weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: True

text: True

text: False

text: False

text: True

text: Never

text: Regularly

text: Regularly

text: Sometimes

text: Never

text: False

text: Caucasian

text: Never

text: No elevated anxiety

text: False

text: Sometimes

text: Sensitive to typical sounds

text: Rarely

text: Rarely

text: Mild self-harming behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Healthy sleep pattern

text: False

text: Drinking water is filtered

text: LR

text: 7-10 meals per week

text: Less than 1

text: Several times weekly

text: Weekly

text: True

text: Understands nearly all words

text: Weekly

text: Never or less than once per week

text: Never

text: Never

text: Several times weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: I also have a child who is 9 (boy) please let me know if you prefer I provide information about that child instead/as well

text: False

text: True

text: Matched with metadata entry NT_T1_Family_020

text: gram

text: False

text: False

text: 7-10 meals per week

text: False

text: Weekly

text: 3-4 meals per week

text: False

text: Mixed infant formula and mother's milk diet

text: 7-10 meals per week

text: Omnivorous diet

text: False

text: False

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Never

text: False

text: False

text: Year

text: Daily

text: Daily

text: 7-10 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: False

text: ng/uL

text: microliter

text: Daily

text: Rarely

text: 7-10 meals per week

text: False

text: Human

text: False

text: Several times weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: True

text: True

text: False

text: False

text: True

text: Never

text: False

text: Caucasian

text: Never

text: No elevated anxiety

text: False

text: Rarely

text: Rarely

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water is filtered

text: HR

text: 7-10 meals per week

text: Weekly

text: Weekly

text: True

text: Several times weekly

text: 3-4 meals per week

text: Never

text: Never

text: Several times weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: female

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry ASD_T2_Family_020

text: gram

text: False

text: False

text: Almost every meal

text: Uncertain about behavioral development

text: False

text: Able to have conversation

text: Several times weekly

text: 7-10 meals per week

text: False

text: 7-10 meals per week

text: Omnivorous diet

text: False

text: False

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: MAD LAB High Throughput Extraction of DNA using the MagAttract PowerMicrobiome DNA/RNA KF Kit

text: Magnetic Beads

text: Some eye contact

text: Rarely

text: False

text: False

text: Year

text: Daily

text: Daily

text: 7-10 meals per week

text: False

text: False

text: False

text: False

text: False

text: False

text: Sometimes

text: False

text: Case (disease status)

text: True

text: Oregon State University

text: live

text: Imitates actions or gestures of others

text: True

text: False

text: Able to speak fluently

text: ng/uL

text: microliter

text: Daily

text: Rarely

text: 7-10 meals per week

text: False

text: Human

text: False

text: Several times weekly

text: False

text: False

text: False

text: Q5 HotStart High Fidelity DNA Polymerase

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: True

text: True

text: False

text: False

text: True

text: Never

text: Regularly

text: Regularly

text: Sometimes

text: Never

text: False

text: Caucasian

text: Never

text: No elevated anxiety

text: False

text: Sometimes

text: Sensitive to typical sounds

text: Rarely

text: Rarely

text: Mild self-harming behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Healthy sleep pattern

text: False

text: Drinking water is filtered

text: LR

text: 7-10 meals per week

text: Less than 1

text: Several times weekly

text: Weekly

text: True

text: Understands nearly all words

text: Weekly

text: 3-4 meals per week

text: Never

text: Never

text: Several times weekly

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry NT_T2_Family_020

text: gram

text: False

text: False

text: 7-10 meals per week

text: False

text: Weekly

text: 7-10 meals per week

text: False

text: 7-10 meals per week

text: Omnivorous diet

text: False

text: False

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Never

text: False

text: False

text: Year

text: Daily

text: Daily

text: 3-4 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: False

text: ng/uL

text: microliter

text: Daily

text: Rarely

text: 7-10 meals per week

text: False

text: Human

text: False

text: Several times weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: NEB Q5 HotStart High-Fidelity 2x Master Mix

text: Invitrogen Quant-it PicoGreen dsDNA Assay kit

text: Veriti Thermocycler (Applied Biosystems)

text: False

text: False

text: True

text: True

text: False

text: False

text: True

text: Never

text: False

text: Caucasian

text: Never

text: No elevated anxiety

text: False

text: Rarely

text: Rarely

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water is filtered

text: LR

text: 7-10 meals per week

text: Weekly

text: Weekly

text: True

text: Several times weekly

text: 7-10 meals per week

text: Never

text: Never

text: Several times weekly

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: female

text: stool

text: Human sample from Homo sapiens


text: Mother GBS positive. Antibiotics during labor. Was breastfed and latching on day 1. Given Hep B vaccine and stopped latching and developed jaundice on Day 2. Had to supplement with formula.

text: False

text: True

text: Matched with metadata entry ASD_T1_Family_014

text: gram

text: False

text: False

text: 7-10 meals per week

text: Developmentally delayed (autism)

text: False

text: Difficulty with conversation

text: Several times weekly

text: 7-10 meals per week

text: False

text: Almost every meal

text: Omnivorous/avoids red meat diet

text: True

text: Reduced sugar intake

text: True

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Some eye contact

text: Several times weekly

text: False

text: False

text: Not in past year

text: Daily

text: Never

text: Never or less than once per week

text: Tends to have diarrhea

text: False

text: True

text: False

text: False

text: False

text: True

text: Continuous

text: False

text: Case (disease status)

text: True

text: Oregon State University

text: live

text: Imitates others when prompted

text: True

text: True

text: Single word speech

text: ng/uL

text: microliter

text: Several times weekly

text: Never

text: 3-4 meals per week

text: Diarrhea & Constipation & Mucus in stool

text: True

text: Human

text: False

text: Rarely

text: False

text: False

text: True

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: True

text: False

text: False

text: False

text: True

text: Rarely

text: Rarely

text: Rarely

text: Sometimes

text: Daily

text: False

text: Caucasian

text: Rarely

text: Somewhat elevated anxiety

text: False

text: Sometimes

text: Highly sensitive to typical sounds

text: Rarely

text: Never

text: Mild self-harming behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: Bioanalyzer is used to asses quality of pooled library. PhiX control spike-in is 20-15% of final load.

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Some sleep difficulties

text: False

text: Drinking water is filtered

text: HR

text: Almost every meal

text: Sampled from toilet collection cover

text: Rarely

text: Weekly

text: False

text: Understands many words

text: Weekly

text: 3-4 meals per week

text: Daily

text: Daily

text: Several times weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: Mother GBS positive. Antibiotics during labor. Exclusively breastfed until 4 months. Will eat a wide range of food.

text: False

text: True

text: Matched with metadata entry NT_T1_Family_014

text: gram

text: False

text: False

text: 7-10 meals per week

text: False

text: Daily

text: Almost every meal

text: False

text: 7-10 meals per week

text: Omnivorous diet

text: True

text: Reduced sugar. No artificial colors etc

text: True

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Weekly

text: False

text: False

text: Not in past year

text: Daily

text: Weekly

text: 7-10 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: False

text: ng/uL

text: microliter

text: Several times weekly

text: Weekly

text: 7-10 meals per week

text: True

text: Human

text: False

text: Weekly

text: False

text: False

text: True

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: True

text: False

text: False

text: False

text: True

text: Daily

text: False

text: Caucasian

text: Rarely

text: No elevated anxiety

text: False

text: Weekly

text: Rarely

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water is filtered

text: LR

text: 7-10 meals per week

text: Several times weekly

text: Rarely

text: Yes, I used the toilet cover when collecting samples from both of my children

text: True

text: Several times weekly

text: 7-10 meals per week

text: Daily

text: Daily

text: Several times weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: female

text: stool

text: Human sample from Homo sapiens


text: He receives a fiber supplement daily

text: False

text: True

text: Matched with metadata entry ASD_T2_Family_035

text: gram

text: False

text: False

text: Almost every meal

text: Developmentally delayed (not clearly autism)

text: False

text: Limited conversation ability

text: Daily

text: 7-10 meals per week

text: False

text: Mother's milk diet

text: 7-10 meals per week

text: Omnivorous diet

text: False

text: False

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Some eye contact

text: Never

text: False

text: False

text: 6 months):Month

text: Daily

text: Never

text: 3-4 meals per week

text: Tends to have constipation

text: False

text: True

text: False

text: False

text: False

text: True

text: Continuous

text: False

text: Case (disease status)

text: True

text: Oregon State University

text: live

text: Imitates actions or gestures of others

text: True

text: False

text: Able to speak fluently

text: ng/uL

text: microliter

text: Several times weekly

text: Weekly

text: Almost every meal

text: Constipation & Abdominal bloating

text: True

text: Human

text: False

text: Several times weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: True

text: False

text: False

text: False

text: True

text: Sometimes

text: Sometimes

text: Sometimes

text: Sometimes

text: Weekly

text: False

text: Caucasian

text: Several times weekly

text: Somewhat elevated anxiety

text: False

text: Never

text: Sensitive to typical sounds

text: Weekly

text: Weekly

text: Mild self-harming behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Healthy sleep pattern

text: False

text: Drinking water from city & Drinking water is filtered

text: LR

text: Almost every meal

text: Sampled from diaper

text: Several times weekly

text: Never

text: False

text: Understands most words

text: Several times weekly

text: 3-4 meals per week

text: Daily

text: Daily

text: Weekly

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry NT_T2_Family_035

text: gram

text: False

text: True

text: Almost every meal

text: False

text: Daily

text: Almost every meal

text: False

text: Mother's milk diet

text: Almost every meal

text: Omnivorous diet

text: False

text: True

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Never

text: False

text: False

text: 6 months):Month

text: Daily

text: Daily

text: 7-10 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: False

text: ng/uL

text: microliter

text: Several times weekly

text: Rarely

text: Almost every meal

text: True

text: Human

text: False

text: Several times weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: True

text: False

text: False

text: False

text: True

text: Rarely

text: False

text: Caucasian

text: Weekly

text: No elevated anxiety

text: False

text: Weekly

text: Rarely

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: HR

text: Almost every meal

text: Sampled from diaper

text: Daily

text: Several times weekly

text: False

text: Weekly

text: 3-4 meals per week

text: Daily

text: Daily

text: Weekly

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: False

text: Matched with metadata entry ASD_T2_Family_039

text: gram

text: False

text: False

text: 3-4 meals per week

text: Unsure (M3)

text: False

text: Limited conversation ability

text: Weekly

text: Never or less than once per week

text: False

text: Mother's milk diet

text: 7-10 meals per week

text: Omnivorous diet

text: False

text: True

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: MAD LAB High Throughput Extraction of DNA using the MagAttract PowerMicrobiome DNA/RNA KF Kit

text: Magnetic Beads

text: Consistent eye contact

text: Weekly

text: False

text: False

text: Not in past year

text: Weekly

text: 3-4 meals per week

text: Tends to have normal bowel function

text: False

text: True

text: False

text: False

text: False

text: True

text: No issues

text: False

text: Case (disease status)

text: Oregon State University

text: live

text: Imitates actions or gestures of others

text: False

text: False

text: Phrase speech

text: ng/uL

text: microliter

text: Daily

text: Several times weekly

text: 7-10 meals per week

text: Constipation

text: False

text: Human

text: False

text: Daily

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Rarely

text: Sometimes

text: Sometimes

text: Sometimes

text: Several times weekly

text: False

text: Caucasian

text: Never

text: No elevated anxiety

text: True

text: Never

text: Sensitive to typical sounds

text: Never

text: Weekly

text: Mild self-harming behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Healthy sleep pattern

text: False

text: HR

text: 7-10 meals per week

text: Rarely

text: Weekly

text: True

text: Understands most words

text: Daily

text: 7-10 meals per week

text: Never

text: Daily

text: Weekly

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: False

text: Matched with metadata entry NT_T2_Family_039

text: gram

text: False

text: False

text: 3-4 meals per week

text: False

text: Several times weekly

text: 7-10 meals per week

text: False

text: Mother's milk diet

text: 7-10 meals per week

text: Omnivorous diet

text: False

text: False

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Never

text: False

text: False

text: Not in past year

text: Several times weekly

text: 3-4 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: Oregon State University

text: live

text: False

text: False

text: ng/uL

text: microliter

text: Daily

text: Several times weekly

text: 7-10 meals per week

text: False

text: Human

text: False

text: Daily

text: False

text: False

text: False

text: Q5 HotStart High Fidelity DNA Polymerase

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Never

text: False

text: Caucasian

text: Never

text: No elevated anxiety

text: False

text: Never

text: Weekly

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: HR

text: 7-10 meals per week

text: Rarely

text: Rarely

text: True

text: Several times weekly

text: 7-10 meals per week

text: Never

text: Never

text: Several times weekly

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry ASD_T1_Family_088

text: gram

text: False

text: False

text: Never or less than once per week

text: Developmentally delayed (autism)

text: False

text: Cannot have a conversation

text: Never

text: Never or less than once per week

text: False

text: Mother's milk diet

text: 7-10 meals per week

text: Omnivorous diet

text: False

text: True

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Some eye contact

text: Never

text: True

text: True

text: Year

text: Several times weekly

text: 3-4 meals per week

text: Tends to have diarrhea

text: True

text: True

text: True

text: True

text: True

text: True

text: Sometimes

text: False

text: Case (disease status)

text: Oregon State University

text: live

text: Imitates others when prompted

text: False

text: False

text: Little to no speech

text: ng/uL

text: microliter

text: Several times weekly

text: Weekly

text: Never or less than once per week

text: Diarrhea & Abdominal bloating & Mucus in stool

text: True

text: Human

text: False

text: Rarely

text: True

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: NEB Q5 HotStart High-Fidelity 2x Master Mix

text: Invitrogen Quant-it PicoGreen dsDNA Assay kit

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Never

text: Never

text: Never

text: Never

text: Rarely

text: False

text: Asian race

text: Rarely

text: Somewhat elevated anxiety

text: True

text: Regularly

text: Not bothered by typical sounds

text: Weekly

text: Never

text: Mild self-harming behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Constant sleep difficulties

text: False

text: Drinking water from city

text: LR

text: 3-4 meals per week

text: Sampled from diaper

text: Weekly

text: Never

text: False

text: France, 3 weeks

text: France

text: Understands many words

text: Daily

text: 3-4 meals per week

text: Never

text: Several time weekly

text: Never

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry NT_T1_Family_088

text: gram

text: False

text: False

text: 7-10 meals per week

text: False

text: Daily

text: Never or less than once per week

text: False

text: Mother's milk diet

text: Almost every meal

text: Omnivorous diet

text: False

text: False

text: False

text: Used toilet cover

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Rarely

text: True

text: True

text: Not in past year

text: Daily

text: Almost every meal

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: Oregon State University

text: live

text: False

text: False

text: ng/uL

text: microliter

text: Weekly

text: Rarely

text: Never or less than once per week

text: False

text: Human

text: False

text: Rarely

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: Veriti Thermocycler (Applied Biosystems)

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Never

text: False

text: Asian race

text: Several times weekly

text: No elevated anxiety

text: True

text: Weekly

text: Rarely

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water from city

text: LR

text: 3-4 meals per week

text: Rarely

text: Rarely

text: Yes, I used the toilet cover, but only for my child without autism

text: True

text: France, 3 weeks

text: France

text: Several times weekly

text: Almost every meal

text: Never

text: Never

text: Never

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: female

text: stool

text: Human sample from Homo sapiens


text: Mother GBS positive. Antibiotics during labor. Was breastfed and latching on day 1. Given Hep B vaccine and stopped latching and developed jaundice on Day 2. Had to supplement with formula.

text: False

text: True

text: Matched with metadata entry ASD_T2_Family_014

text: gram

text: False

text: False

text: 7-10 meals per week

text: Developmentally delayed (autism)

text: False

text: Difficulty with conversation

text: Several times weekly

text: 7-10 meals per week

text: False

text: Mixed infant formula and mother's milk diet

text: 7-10 meals per week

text: Omnivorous/avoids red meat diet

text: True

text: Reduced sugar intake

text: True

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Some eye contact

text: Several times weekly

text: False

text: False

text: Not in past year

text: Daily

text: Never

text: 3-4 meals per week

text: Tends to have diarrhea

text: False

text: True

text: False

text: False

text: False

text: True

text: Continuous

text: False

text: Case (disease status)

text: True

text: Oregon State University

text: live

text: Imitates others when prompted

text: True

text: True

text: Single word speech

text: ng/uL

text: microliter

text: Several times weekly

text: Never

text: 3-4 meals per week

text: Diarrhea & Constipation & Mucus in stool

text: True

text: Human

text: False

text: Rarely

text: False

text: False

text: True

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: True

text: False

text: False

text: False

text: True

text: Rarely

text: Rarely

text: Rarely

text: Sometimes

text: Daily

text: False

text: Caucasian

text: Rarely

text: No elevated anxiety

text: False

text: Sometimes

text: Highly sensitive to typical sounds

text: Rarely

text: Never

text: Mild self-harming behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: Bioanalyzer is used to asses quality of pooled library. PhiX control spike-in is 20-15% of final load.

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Some sleep difficulties

text: False

text: Drinking water is filtered

text: HR

text: 7-10 meals per week

text: Sampled from toilet collection cover

text: Rarely

text: Weekly

text: False

text: Understands many words

text: Weekly

text: 7-10 meals per week

text: Daily

text: Daily

text: Several times weekly

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: Mother GBS positive. Antibiotics during labor. Exclusively breastfed until 4 months. Will eat a wide range of food.

text: False

text: True

text: Matched with metadata entry NT_T2_Family_014

text: gram

text: False

text: False

text: 7-10 meals per week

text: False

text: Daily

text: 7-10 meals per week

text: False

text: 7-10 meals per week

text: Omnivorous diet

text: True

text: Reduced sugar. No artificial colors etc

text: True

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Weekly

text: False

text: False

text: Not in past year

text: Daily

text: Weekly

text: 3-4 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: False

text: ng/uL

text: microliter

text: Several times weekly

text: Weekly

text: 7-10 meals per week

text: True

text: Human

text: False

text: Weekly

text: False

text: False

text: True

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: True

text: False

text: False

text: False

text: True

text: Daily

text: False

text: Caucasian

text: Rarely

text: No elevated anxiety

text: False

text: Weekly

text: Rarely

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water is filtered

text: HR

text: 7-10 meals per week

text: Several times weekly

text: Rarely

text: Yes, I used the toilet cover when collecting samples from both of my children

text: True

text: Several times weekly

text: 7-10 meals per week

text: Daily

text: Daily

text: Several times weekly

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: female

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry ASD_T2_Family_088

text: gram

text: False

text: False

text: 3-4 meals per week

text: Developmentally delayed (autism)

text: False

text: Cannot have a conversation

text: Never

text: 3-4 meals per week

text: False

text: Mother's milk diet

text: Almost every meal

text: Omnivorous diet

text: False

text: True

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: MAD LAB High Throughput Extraction of DNA using the MagAttract PowerMicrobiome DNA/RNA KF Kit

text: Magnetic Beads

text: Some eye contact

text: Never

text: False

text: False

text: Year

text: Several times weekly

text: 3-4 meals per week

text: Tends to have diarrhea

text: True

text: True

text: True

text: True

text: True

text: True

text: Sometimes

text: False

text: Case (disease status)

text: Oregon State University

text: live

text: Imitates others when prompted

text: False

text: False

text: Little to no speech

text: ng/uL

text: microliter

text: Several times weekly

text: Weekly

text: 3-4 meals per week

text: True

text: Human

text: False

text: Rarely

text: True

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Never

text: Never

text: Never

text: Never

text: Rarely

text: False

text: Asian race

text: Rarely

text: Somewhat elevated anxiety

text: False

text: Regularly

text: Not bothered by typical sounds

text: Weekly

text: Never

text: Mild self-harming behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Constant sleep difficulties

text: False

text: Drinking water from city

text: LR

text: Almost every meal

text: Sampled from diaper

text: Weekly

text: Never

text: False

text: France, 3 weeks

text: France

text: Understands many words

text: Daily

text: Almost every meal

text: Never

text: Several time weekly

text: Never

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry NT_T2_Family_088

text: gram

text: False

text: False

text: Almost every meal

text: False

text: Daily

text: Never or less than once per week

text: False

text: Mother's milk diet

text: Almost every meal

text: Omnivorous diet

text: False

text: False

text: False

text: Get some stool from different places of stool

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Rarely

text: False

text: False

text: Not in past year

text: Daily

text: 3-4 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: Oregon State University

text: live

text: False

text: False

text: ng/uL

text: microliter

text: Weekly

text: Rarely

text: 7-10 meals per week

text: False

text: Human

text: False

text: Rarely

text: False

text: False

text: False

text: Q5 HotStart High Fidelity DNA Polymerase

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Never

text: False

text: Asian race

text: Several times weekly

text: No elevated anxiety

text: False

text: Weekly

text: Rarely

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water from city

text: HR

text: 3-4 meals per week

text: Rarely

text: Rarely

text: Yes, I used the toilet cover, but only for my child with autism

text: True

text: France, 3 weeks

text: France

text: Several times weekly

text: 3-4 meals per week

text: Never

text: Never

text: Never

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: female

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry ASD_T1_Family_077

text: gram

text: False

text: False

text: 3-4 meals per week

text: Developmentally delayed (autism)

text: False

text: Able to have conversation

text: Never

text: Never or less than once per week

text: False

text: Mother's milk diet

text: Almost every meal

text: Omnivorous diet

text: True

text: No dairy. Limited soy. Mostly organic.

text: True

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Consistent eye contact

text: Rarely

text: False

text: False

text: Not in past year

text: Daily

text: Daily

text: 7-10 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: Sometimes

text: False

text: Case (disease status)

text: True

text: Oregon State University

text: live

text: Imitates actions or gestures of others

text: True

text: False

text: Able to speak fluently

text: ng/uL

text: microliter

text: Daily

text: Weekly

text: Almost every meal

text: False

text: Human

text: True

text: Several times weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: NEB Q5 HotStart High-Fidelity 2x Master Mix

text: Invitrogen Quant-it PicoGreen dsDNA Assay kit

text: True

text: False

text: False

text: True

text: False

text: False

text: True

text: Regularly

text: Sometimes

text: Regularly

text: Regularly

text: Weekly

text: False

text: Caucasian

text: Never

text: No elevated anxiety

text: False

text: Sometimes

text: Sensitive to typical sounds

text: Rarely

text: Rarely

text: No self-injurious behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Healthy sleep pattern

text: False

text: Drinking water is filtered

text: HR

text: 7-10 meals per week

text: Several times weekly

text: Never

text: True

text: Understands nearly all words

text: Several times weekly

text: 3-4 meals per week

text: Daily

text: Daily

text: Weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry NT_T1_Family_077

text: gram

text: False

text: False

text: 3-4 meals per week

text: False

text: Never

text: Never or less than once per week

text: False

text: Mother's milk diet

text: Almost every meal

text: Omnivorous diet

text: True

text: Dairy and soy free, mostly organic.

text: True

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Rarely

text: False

text: False

text: Not in past year

text: Daily

text: Daily

text: 7-10 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: False

text: ng/uL

text: microliter

text: Daily

text: Several times weekly

text: 7-10 meals per week

text: False

text: Human

text: True

text: Several times weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: Veriti Thermocycler (Applied Biosystems)

text: True

text: False

text: False

text: True

text: False

text: False

text: True

text: Rarely

text: False

text: Caucasian

text: Never

text: No elevated anxiety

text: False

text: Rarely

text: Rarely

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water is filtered

text: LR

text: 7-10 meals per week

text: Several times weekly

text: Never

text: True

text: Several times weekly

text: 3-4 meals per week

text: Daily

text: Daily

text: Several times weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: female

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry ASD_T2_Family_077

text: gram

text: False

text: False

text: 3-4 meals per week

text: Developmentally delayed (autism)

text: False

text: Able to have conversation

text: Never

text: Never or less than once per week

text: False

text: Mother's milk diet

text: 7-10 meals per week

text: Omnivorous diet

text: True

text: No dairy. Limited soy. Mostly organic.

text: True

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Consistent eye contact

text: Rarely

text: False

text: False

text: Not in past year

text: Daily

text: Daily

text: 7-10 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: Sometimes

text: False

text: Case (disease status)

text: True

text: Oregon State University

text: live

text: Imitates actions or gestures of others

text: True

text: False

text: Able to speak fluently

text: ng/uL

text: microliter

text: Daily

text: Weekly

text: 3-4 meals per week

text: False

text: Human

text: True

text: Several times weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: True

text: False

text: False

text: True

text: False

text: False

text: True

text: Regularly

text: Sometimes

text: Regularly

text: Regularly

text: Weekly

text: False

text: Caucasian

text: Never

text: No elevated anxiety

text: False

text: Sometimes

text: Sensitive to typical sounds

text: Rarely

text: Rarely

text: No self-injurious behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Healthy sleep pattern

text: False

text: Drinking water is filtered

text: LR

text: 7-10 meals per week

text: Several times weekly

text: Never

text: True

text: Understands nearly all words

text: Several times weekly

text: 3-4 meals per week

text: Daily

text: Daily

text: Weekly

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry NT_T2_Family_077

text: gram

text: False

text: False

text: 3-4 meals per week

text: False

text: Never

text: Never or less than once per week

text: False

text: Mother's milk diet

text: 7-10 meals per week

text: Omnivorous diet

text: True

text: Dairy and soy free, mostly organic.

text: True

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Rarely

text: True

text: False

text: Not in past year

text: Daily

text: Daily

text: 7-10 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: False

text: ng/uL

text: microliter

text: Daily

text: Several times weekly

text: 7-10 meals per week

text: False

text: Human

text: True

text: Several times weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: True

text: False

text: False

text: True

text: False

text: False

text: True

text: Rarely

text: False

text: Caucasian

text: Never

text: No elevated anxiety

text: True

text: Rarely

text: Rarely

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water is filtered

text: HR

text: 7-10 meals per week

text: Several times weekly

text: Never

text: True

text: Several times weekly

text: 3-4 meals per week

text: Daily

text: Daily

text: Several times weekly

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: female

text: stool

text: Human sample from Homo sapiens


text: Won't tolerate whole fruits or vegetables, but will accept Stage 1 baby food fruit/veg blends. Currently will eat: apple-blueberry blend and pear/purple carrot/blueberry blend. Occasional applesauce prepared at home from organic apples with no sugar added. Whole grains are a challenge. He will eat rice (white, not brown), won't eat bread, occasional quinoa, rice pasta. Will not eat beef despite effort to engage him to do so. Will eat chicken, pork and occasional roasted shrimp prepared at home. I answered NO to dairy given the question likely reference cow's milk dairy. My son doesn't tolerate dairy well, but will drinks hemp milk (carrageenan free) and a vitamin fortified vegan drink to supplement provide vitamins/minerals. Gluten sensitivity testing was done at Enterolab. He was positive for anti-gliadin IgA in stool, not the standard IgG test that is nonspecific. This is an important distinction we raised with GI when we were assessing gut issues.

text: False

text: False

text: Matched with metadata entry ASD_T2_Family_100

text: gram

text: False

text: False

text: Never or less than once per week

text: Developmentally delayed (autism)

text: False

text: Able to have conversation

text: Never

text: 3-4 meals per week

text: False

text: Mixed infant formula and mother's milk diet

text: 7-10 meals per week

text: Omnivorous/avoids red meat diet

text: True

text: Not lactose intolerant by testing, but shows signs of GI distress with cow's milk foods

text: True

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Some eye contact

text: Never

text: False

text: False

text: 6 months):Month

text: Several times weekly

text: 3-4 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: Sometimes

text: True

text: Case (disease status)

text: Oregon State University

text: live

text: Imitates actions or gestures of others

text: False

text: False

text: Able to speak fluently

text: ng/uL

text: microliter

text: Daily

text: Never

text: 3-4 meals per week

text: False

text: Human

text: False

text: Daily

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Regularly

text: Sometimes

text: Sometimes

text: Sometimes

text: Weekly

text: False

text: Caucasian

text: Rarely

text: Somewhat elevated anxiety

text: True

text: Sometimes

text: Sensitive to typical sounds

text: Rarely

text: Rarely

text: Mild self-harming behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: Bioanalyzer is used to asses quality of pooled library. PhiX control spike-in is 20-15% of final load.

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Some sleep difficulties

text: False

text: Drinking water from city

text: Gluten-containing grain & Egg

text: HR

text: Almost every meal

text: Weekly

text: Never

text: True

text: Understands nearly all words

text: Several times weekly

text: 3-4 meals per week

text: Occasionally

text: Weekly

text: Weekly

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: She will eat all meat options except for seafood. She won't eat cow's milk dairy and struggles to take a calcium/vit D supp despite purchasing myriad brands. Will eat a variety of vegetables, some whole grains, but doesn't like fruit except Stage 1 fruit pouch or applesauce. Also tested positive for Anti-gliadin IgA through Enterolab for gluten allergy. Did not run the standard nonspecific IgG test.

text: False

text: False

text: Matched with metadata entry NT_T2_Family_100

text: gram

text: False

text: False

text: 7-10 meals per week

text: False

text: Never

text: Never or less than once per week

text: False

text: Almost every meal

text: Omnivorous diet

text: True

text: She will not eat any dairy of her own accord

text: False

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: MAD LAB High Throughput Extraction of DNA using the MagAttract PowerMicrobiome DNA/RNA KF Kit

text: Magnetic Beads

text: Never

text: False

text: False

text: 6 months):Month

text: Several times weekly

text: 7-10 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: True

text: Control (disease status)

text: Oregon State University

text: live

text: False

text: False

text: ng/uL

text: microliter

text: Daily

text: Weekly

text: 7-10 meals per week

text: False

text: Human

text: False

text: Daily

text: False

text: True

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Weekly

text: False

text: Caucasian

text: Rarely

text: No elevated anxiety

text: True

text: Never

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water from city

text: Gluten-containing grain

text: HR

text: 3-4 meals per week

text: Weekly

text: Never

text: Yes, I used the toilet cover when collecting samples from both of my children

text: True

text: Weekly

text: 7-10 meals per week

text: Rarely

text: Rarely

text: Several times weekly

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: female

text: stool

text: Human sample from Homo sapiens


text: He eats yogurt once a day and prior to 4 years old would not eat any meat (but eats all meats regularly now).

text: False

text: True

text: Matched with metadata entry ASD_T3_Family_020

text: gram

text: False

text: False

text: Almost every meal

text: Uncertain about behavioral development

text: False

text: Able to have conversation

text: Several times weekly

text: 7-10 meals per week

text: False

text: 3-4 meals per week

text: Omnivorous diet

text: False

text: False

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Some eye contact

text: Rarely

text: False

text: False

text: Year

text: Daily

text: Daily

text: 7-10 meals per week

text: False

text: False

text: False

text: False

text: False

text: False

text: Sometimes

text: False

text: Case (disease status)

text: True

text: Oregon State University

text: live

text: Imitates actions or gestures of others

text: True

text: False

text: Able to speak fluently

text: ng/uL

text: microliter

text: Daily

text: Rarely

text: 3-4 meals per week

text: False

text: Human

text: False

text: Several times weekly

text: False

text: False

text: False

text: Q5 HotStart High Fidelity DNA Polymerase

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: True

text: True

text: False

text: False

text: True

text: Never

text: Regularly

text: Regularly

text: Sometimes

text: Never

text: True

text: Caucasian

text: Never

text: Somewhat elevated anxiety

text: False

text: Sometimes

text: Sensitive to typical sounds

text: Rarely

text: Rarely

text: Mild self-harming behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Healthy sleep pattern

text: False

text: Drinking water is filtered

text: LR

text: 7-10 meals per week

text: Less than 1

text: He didn't want to use the bucket so this took longer than expected!!

text: Several times weekly

text: Weekly

text: True

text: Understands nearly all words

text: Weekly

text: 3-4 meals per week

text: Never

text: Never

text: Several times weekly

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: I also have a child who is 9 (boy) please let me know if you prefer I provide information about that child instead/as well

text: False

text: True

text: Matched with metadata entry NT_T3_Family_020

text: gram

text: False

text: False

text: 7-10 meals per week

text: False

text: Weekly

text: 3-4 meals per week

text: False

text: 7-10 meals per week

text: Omnivorous diet

text: False

text: False

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Never

text: False

text: False

text: Year

text: Daily

text: Daily

text: 3-4 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: False

text: ng/uL

text: microliter

text: Daily

text: Rarely

text: 7-10 meals per week

text: False

text: Human

text: False

text: Several times weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: NEB Q5 HotStart High-Fidelity 2x Master Mix

text: Invitrogen Quant-it PicoGreen dsDNA Assay kit

text: Veriti Thermocycler (Applied Biosystems)

text: False

text: False

text: True

text: True

text: False

text: False

text: True

text: Never

text: False

text: Caucasian

text: Never

text: No elevated anxiety

text: False

text: Rarely

text: Rarely

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water is filtered

text: LR

text: 7-10 meals per week

text: Weekly

text: Weekly

text: True

text: Several times weekly

text: 7-10 meals per week

text: Never

text: Never

text: Several times weekly

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: female

text: stool

text: Human sample from Homo sapiens


text: Mother GBS positive. Antibiotics during labor. Was breastfed and latching on day 1. Given Hep B vaccine and stopped latching and developed jaundice on Day 2. Had to supplement with formula.

text: False

text: True

text: Matched with metadata entry ASD_T3_Family_014

text: gram

text: False

text: False

text: 7-10 meals per week

text: Developmentally delayed (autism)

text: False

text: Difficulty with conversation

text: Several times weekly

text: 3-4 meals per week

text: False

text: Mixed infant formula and mother's milk diet

text: 7-10 meals per week

text: Omnivorous/avoids red meat diet

text: True

text: Reduced sugar intake

text: True

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Some eye contact

text: Several times weekly

text: False

text: False

text: Not in past year

text: Daily

text: Never

text: 3-4 meals per week

text: Tends to have diarrhea

text: False

text: True

text: False

text: False

text: False

text: True

text: Continuous

text: False

text: Case (disease status)

text: True

text: Oregon State University

text: live

text: Imitates others when prompted

text: True

text: True

text: Single word speech

text: ng/uL

text: microliter

text: Several times weekly

text: Never

text: 3-4 meals per week

text: Diarrhea & Constipation & Mucus in stool

text: True

text: Human

text: False

text: Rarely

text: False

text: False

text: True

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: True

text: False

text: False

text: False

text: True

text: Rarely

text: Rarely

text: Rarely

text: Sometimes

text: Daily

text: False

text: Caucasian

text: Rarely

text: No elevated anxiety

text: False

text: Sometimes

text: Highly sensitive to typical sounds

text: Rarely

text: Never

text: Mild self-harming behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Some sleep difficulties

text: False

text: Drinking water is filtered

text: HR

text: 7-10 meals per week

text: Sampled from toilet collection cover

text: Rarely

text: Weekly

text: False

text: Understands many words

text: Weekly

text: 7-10 meals per week

text: Daily

text: Daily

text: Several times weekly

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: Mother GBS positive. Antibiotics during labor. Exclusively breastfed until 4 months. Will eat a wide range of food.

text: False

text: True

text: Matched with metadata entry NT_T3_Family_014

text: gram

text: False

text: False

text: 7-10 meals per week

text: False

text: Daily

text: 7-10 meals per week

text: False

text: 7-10 meals per week

text: Omnivorous diet

text: True

text: Reduced sugar. No artificial colors etc

text: True

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Weekly

text: False

text: False

text: Not in past year

text: Daily

text: Weekly

text: 3-4 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: False

text: ng/uL

text: microliter

text: Several times weekly

text: Weekly

text: 7-10 meals per week

text: True

text: Human

text: False

text: Weekly

text: False

text: False

text: True

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: True

text: False

text: False

text: False

text: True

text: Daily

text: False

text: Caucasian

text: Rarely

text: No elevated anxiety

text: False

text: Weekly

text: Rarely

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: Bioanalyzer is used to asses quality of pooled library. PhiX control spike-in is 20-15% of final load.

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water is filtered

text: HR

text: 7-10 meals per week

text: Several times weekly

text: Rarely

text: True

text: Several times weekly

text: 7-10 meals per week

text: Daily

text: Daily

text: Several times weekly

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: female

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry ASD_T3_Family_088

text: gram

text: False

text: False

text: 3-4 meals per week

text: Developmentally delayed (autism)

text: False

text: Cannot have a conversation

text: Never

text: 3-4 meals per week

text: False

text: Mother's milk diet

text: Almost every meal

text: Omnivorous diet

text: False

text: True

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: MAD LAB High Throughput Extraction of DNA using the MagAttract PowerMicrobiome DNA/RNA KF Kit

text: Magnetic Beads

text: Some eye contact

text: Never

text: False

text: False

text: Year

text: Several times weekly

text: 3-4 meals per week

text: Tends to have diarrhea

text: True

text: True

text: True

text: True

text: True

text: True

text: Sometimes

text: False

text: Case (disease status)

text: Oregon State University

text: live

text: Imitates others when prompted

text: False

text: False

text: Little to no speech

text: ng/uL

text: microliter

text: Several times weekly

text: Weekly

text: 3-4 meals per week

text: Diarrhea & Abdominal bloating & Mucus in stool

text: True

text: Human

text: False

text: Rarely

text: True

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Never

text: Never

text: Never

text: Never

text: Rarely

text: False

text: Asian race

text: Rarely

text: No elevated anxiety

text: False

text: Regularly

text: Not bothered by typical sounds

text: Weekly

text: Never

text: Mild self-harming behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Constant sleep difficulties

text: False

text: Drinking water from city

text: LR

text: 7-10 meals per week

text: Sampled from diaper

text: Weekly

text: Never

text: False

text: France, 3 weeks

text: France

text: Understands many words

text: Daily

text: 3-4 meals per week

text: Never

text: Several time weekly

text: Never

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry NT_T3_Family_088

text: gram

text: False

text: False

text: 7-10 meals per week

text: False

text: Daily

text: Never or less than once per week

text: False

text: Mother's milk diet

text: 3-4 meals per week

text: Omnivorous diet

text: False

text: False

text: False

text: Get the sample from different

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Rarely

text: False

text: False

text: Not in past year

text: Daily

text: 3-4 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: Oregon State University

text: live

text: False

text: False

text: ng/uL

text: microliter

text: Weekly

text: Rarely

text: 7-10 meals per week

text: False

text: Human

text: False

text: Rarely

text: False

text: False

text: False

text: Q5 HotStart High Fidelity DNA Polymerase

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Never

text: False

text: Asian race

text: Several times weekly

text: No elevated anxiety

text: False

text: Weekly

text: Rarely

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water from city

text: HR

text: 3-4 meals per week

text: Rarely

text: Rarely

text: Yes, I used the toilet cover, but only for my child without autism

text: True

text: France, 3 weeks

text: France

text: Several times weekly

text: Never or less than once per week

text: Never

text: Never

text: Never

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: female

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry ASD_T3_Family_077

text: gram

text: False

text: False

text: 7-10 meals per week

text: Developmentally delayed (autism)

text: False

text: Able to have conversation

text: Never

text: Never or less than once per week

text: False

text: Mother's milk diet

text: 7-10 meals per week

text: Omnivorous diet

text: True

text: No dairy. Limited soy. Mostly organic.

text: True

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Consistent eye contact

text: Rarely

text: False

text: False

text: Not in past year

text: Daily

text: Daily

text: 7-10 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: Sometimes

text: False

text: Case (disease status)

text: True

text: Oregon State University

text: live

text: Imitates actions or gestures of others

text: True

text: False

text: Able to speak fluently

text: ng/uL

text: microliter

text: Daily

text: Weekly

text: 3-4 meals per week

text: False

text: Human

text: True

text: Several times weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: True

text: False

text: False

text: True

text: False

text: False

text: True

text: Regularly

text: Sometimes

text: Regularly

text: Regularly

text: Weekly

text: False

text: Caucasian

text: Never

text: No elevated anxiety

text: False

text: Sometimes

text: Sensitive to typical sounds

text: Rarely

text: Rarely

text: No self-injurious behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Healthy sleep pattern

text: False

text: Drinking water is filtered

text: HR

text: 3-4 meals per week

text: Several times weekly

text: Never

text: Yes, I used the toilet cover when collecting samples from both of my children

text: True

text: Understands nearly all words

text: Several times weekly

text: 3-4 meals per week

text: Daily

text: Daily

text: Weekly

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry NT_T3_Family_077

text: gram

text: False

text: False

text: 3-4 meals per week

text: False

text: Never

text: Never or less than once per week

text: False

text: Mother's milk diet

text: 7-10 meals per week

text: Omnivorous diet

text: True

text: Dairy and soy free, mostly organic.

text: True

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Rarely

text: False

text: False

text: Not in past year

text: Daily

text: Daily

text: 7-10 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: False

text: ng/uL

text: microliter

text: Daily

text: Several times weekly

text: 3-4 meals per week

text: False

text: Human

text: True

text: Several times weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: NEB Q5 HotStart High-Fidelity 2x Master Mix

text: Invitrogen Quant-it PicoGreen dsDNA Assay kit

text: True

text: False

text: False

text: True

text: False

text: False

text: True

text: Rarely

text: False

text: Caucasian

text: Never

text: No elevated anxiety

text: False

text: Rarely

text: Rarely

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water is filtered

text: HR

text: 7-10 meals per week

text: Several times weekly

text: Never

text: True

text: Several times weekly

text: 3-4 meals per week

text: Daily

text: Daily

text: Several times weekly

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: female

text: stool

text: Human sample from Homo sapiens


text: My son has red cheeks, varies on brightness, and has small pimples on his ear and upper arms. We feel there may be a link with diet.

text: False

text: False

text: Matched with metadata entry ASD_T3_Family_101

text: gram

text: True

text: False

text: 7-10 meals per week

text: Developmentally delayed (not clearly autism)

text: False

text: Difficulty with conversation

text: Rarely

text: 3-4 meals per week

text: False

text: Mother's milk diet

text: 3-4 meals per week

text: Omnivorous diet

text: False

text: True

text: False

text: In diaper for typical sibling

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Some eye contact

text: Rarely

text: False

text: False

text: Not in past year

text: Several times weekly

text: 7-10 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: Sometimes

text: False

text: Case (disease status)

text: False

text: Oregon State University

text: live

text: Imitates others when prompted

text: True

text: False

text: Phrase speech

text: ng/uL

text: microliter

text: Daily

text: Weekly

text: 3-4 meals per week

text: False

text: Human

text: False

text: Daily

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: Veriti Thermocycler (Applied Biosystems)

text: False

text: False

text: True

text: True

text: False

text: False

text: True

text: Sometimes

text: Rarely

text: Never

text: Sometimes

text: Never

text: False

text: Caucasian

text: Never

text: No elevated anxiety

text: False

text: Never

text: Not bothered by typical sounds

text: Rarely

text: Weekly

text: No self-injurious behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Healthy sleep pattern

text: False

text: Drinking water is bottled & Drinking water is filtered

text: LR

text: 7-10 meals per week

text: Weekly

text: Never

text: True

text: Understands most words

text: Several times weekly

text: 7-10 meals per week

text: Never

text: Never

text: Several times weekly

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: False

text: Matched with metadata entry NT_T3_Family_101

text: gram

text: True

text: False

text: 7-10 meals per week

text: False

text: Daily

text: 7-10 meals per week

text: False

text: Mother's milk diet

text: 3-4 meals per week

text: Omnivorous diet

text: False

text: False

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Rarely

text: False

text: False

text: Not in past year

text: Weekly

text: 7-10 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: False

text: Oregon State University

text: live

text: True

text: False

text: ng/uL

text: microliter

text: Daily

text: Several times weekly

text: 3-4 meals per week

text: False

text: Human

text: False

text: Daily

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: True

text: True

text: False

text: False

text: True

text: Never

text: False

text: Caucasian

text: Never

text: No elevated anxiety

text: False

text: Rarely

text: Weekly

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: Bioanalyzer is used to asses quality of pooled library. PhiX control spike-in is 20-15% of final load.

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: LR

text: 7-10 meals per week

text: Sampled from diaper

text: Rarely

text: Never

text: False

text: Several times weekly

text: 7-10 meals per week

text: Never

text: Never

text: Weekly

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: female

text: stool

text: Human sample from Homo sapiens


text: My son had successful FMT since participating in the last trial. His GI issues and sleep are vastly improved. We recently learned he has congenital Lyme, though, and might need to begin abx soon.

text: More than 200000

text: False

text: False

text: Matched with metadata entry ASD_T3_Family_018

text: gram

text: True

text: True

text: Never or less than once per week

text: False

text: Difficulty with conversation

text: Never

text: Never or less than once per week

text: False

text: Mixed infant formula and mother's milk diet

text: 7-10 meals per week

text: Omnivorous diet

text: True

text: No grains, casein, soy, sugar, potatoes (SCD diet)

text: True

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: MAD LAB High Throughput Extraction of DNA using the MagAttract PowerMicrobiome DNA/RNA KF Kit

text: Magnetic Beads

text: Consistent eye contact

text: Weekly

text: False

text: False

text: Not in past year

text: Monthly

text: Several times weekly

text: Almost every meal

text: Tends to have normal bowel function

text: True

text: False

text: False

text: False

text: False

text: True

text: Sometimes

text: False

text: Case (disease status)

text: True

text: Oregon State University

text: live

text: Imitates actions or gestures of others

text: True

text: False

text: Single word speech

text: ng/uL

text: microliter

text: Daily

text: Weekly

text: Almost every meal

text: Diarrhea

text: True

text: Human

text: True

text: Weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: True

text: False

text: False

text: False

text: False

text: True

text: Regularly

text: Sometimes

text: Rarely

text: Sometimes

text: Weekly

text: False

text: Caucasian

text: Never

text: Somewhat elevated anxiety

text: False

text: Never

text: Not bothered by typical sounds

text: Weekly

text: Weekly

text: Mild self-harming behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Some sleep difficulties

text: False

text: HR

text: Never or less than once per week

text: Never

text: Never

text: True

text: Panama 1 week

text: Panama

text: Understands many words

text: Daily

text: Almost every meal

text: Daily

text: Daily

text: Never

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: More than 200000

text: False

text: False

text: Matched with metadata entry NT_T3_Family_018

text: gram

text: True

text: True

text: 3-4 meals per week

text: False

text: Weekly

text: 7-10 meals per week

text: False

text: 7-10 meals per week

text: Omnivorous diet

text: False

text: True

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Rarely

text: False

text: False

text: Not in past year

text: Monthly

text: Several times weekly

text: Almost every meal

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: False

text: ng/uL

text: microliter

text: Daily

text: Weekly

text: Almost every meal

text: True

text: Human

text: True

text: Weekly

text: False

text: False

text: False

text: Q5 HotStart High Fidelity DNA Polymerase

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: True

text: False

text: False

text: False

text: False

text: True

text: Never

text: False

text: Caucasian

text: Never

text: Somewhat elevated anxiety

text: False

text: Weekly

text: Rarely

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: HR

text: Never or less than once per week

text: Never

text: Never

text: True

text: Panama 1 week

text: Panama

text: Daily

text: Almost every meal

text: Never

text: Never

text: Never

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: female

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry ASD_T1_Family_159

text: gram

text: SBIR Box 20

text: False

text: False

text: Almost every meal

text: Uncertain about behavioral development

text: False

text: Able to have conversation

text: Daily

text: Almost every meal

text: False

text: Mother's milk diet

text: 7-10 meals per week

text: Omnivorous diet

text: False

text: False

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Some eye contact

text: Rarely

text: False

text: False

text: 6 months

text: Several times weekly

text: 7-10 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: Sometimes

text: False

text: Case (disease status)

text: Oregon State University

text: live

text: Imitates others when prompted

text: False

text: True

text: Able to speak fluently

text: ng/uL

text: microliter

text: Daily

text: Weekly

text: Almost every meal

text: False

text: Human

text: False

text: Several times weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Regularly

text: Sometimes

text: Rarely

text: Sometimes

text: Never

text: False

text: Caucasian

text: Rarely

text: No elevated anxiety

text: False

text: Never

text: Highly sensitive to typical sounds

text: Rarely

text: Rarely

text: No self-injurious behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Healthy sleep pattern

text: False

text: Drinking water from city & Drinking water is filtered

text: LR

text: 3-4 meals per week

text: Sampled from diaper

text: Weekly

text: Rarely

text: False

text: Understands nearly all words

text: Weekly

text: 3-4 meals per week

text: Never

text: Never

text: Several times weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry NT_T1_Family_159

text: gram

text: SBIR Box 20

text: False

text: False

text: 7-10 meals per week

text: False

text: Daily

text: Almost every meal

text: False

text: Mother's milk diet

text: 7-10 meals per week

text: Omnivorous diet

text: False

text: False

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Rarely

text: False

text: False

text: 6 months

text: Daily

text: 7-10 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: Oregon State University

text: live

text: False

text: False

text: ng/uL

text: microliter

text: Daily

text: Rarely

text: Almost every meal

text: False

text: Human

text: False

text: Weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: NEB Q5 HotStart High-Fidelity 2x Master Mix

text: Invitrogen Quant-it PicoGreen dsDNA Assay kit

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Never

text: False

text: Caucasian

text: Rarely

text: No elevated anxiety

text: False

text: Rarely

text: Rarely

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: LR

text: 3-4 meals per week

text: Sampled from diaper

text: Rarely

text: Rarely

text: False

text: Several times weekly

text: 7-10 meals per week

text: Never

text: Never

text: Several times weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: female

text: stool

text: Human sample from Homo sapiens


text: Very limited diet due to NO folic acid due to MTHFR and no Casein due to folate receptor antibody accompanied by VERY picky eating. He eats the same thing EVERY SINGLE DAY.

text: True

text: True

text: Matched with metadata entry ASD_T1_Family_148

text: gram

text: SBIR Box 22 E1, E2

text: True

text: False

text: Almost every meal

text: Met all developmental milestones

text: False

text: Cannot have a conversation

text: Never

text: Never or less than once per week

text: False

text: Infant formula diet

text: Almost every meal

text: Vegetarian diet

text: True

text: No Casein due to double MTHFR mutation

text: True

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Some eye contact

text: Never

text: False

text: False

text: Not in past year

text: Weekly

text: Daily

text: Almost every meal

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: Sometimes

text: False

text: Case (disease status)

text: True

text: Oregon State University

text: live

text: Imitates actions or gestures of others

text: False

text: 1 (ASD)

text: False

text: Little to no speech

text: ng/uL

text: microliter

text: Rarely

text: Never

text: Never or less than once per week

text: True

text: Human

text: False

text: Weekly

text: False

text: True

text: True

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: True

text: False

text: False

text: False

text: False

text: True

text: Sometimes

text: Sometimes

text: Never

text: Sometimes

text: Daily

text: False

text: Caucasian

text: Several times weekly

text: Elevated anxiety

text: True

text: Sometimes

text: Not bothered by typical sounds

text: Never

text: Never

text: Mild self-harming behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Constant sleep difficulties

text: False

text: Drinking water is filtered

text: HR

text: Never or less than once per week

text: Sampled from diaper

text: Rarely

text: Never

text: False

text: Understands most words

text: Never

text: Never or less than once per week

text: Daily

text: Daily

text: Weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: True

text: True

text: Matched with metadata entry NT_T1_Family_148

text: gram

text: SBIR Box 22 E1, E2

text: True

text: False

text: Almost every meal

text: False

text: Daily

text: Almost every meal

text: False

text: Infant formula diet

text: Almost every meal

text: Omnivorous diet

text: False

text: False

text: False

text: In toilet cover

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Never

text: False

text: False

text: Not in past year

text: Weekly

text: Several times weekly

text: Almost every meal

text: Tends to have constipation

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: False

text: False

text: ng/uL

text: microliter

text: Daily

text: Weekly

text: Almost every meal

text: True

text: Human

text: False

text: Weekly

text: False

text: True

text: True

text: static

text: Agencourt Ampure XP Beads

text: bead

text: Veriti Thermocycler (Applied Biosystems)

text: False

text: True

text: False

text: False

text: False

text: False

text: True

text: Daily

text: False

text: Caucasian

text: Rarely

text: No elevated anxiety

text: True

text: Rarely

text: Never

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water is filtered

text: LR

text: 3-4 meals per week

text: Never

text: Never

text: Yes, I used the toilet cover, but only for my child with autism

text: True

text: Several times weekly

text: 3-4 meals per week

text: Daily

text: Daily

text: Several times weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: female

text: stool

text: Human sample from Homo sapiens


text: [ASDchild] is very picky. He mostly eats vegetable soups and chicken broth with chicken breast and rice spaghetti, rice or buckwheat. He also likes potato chips (cooked in olive oil), GF pretzels. No fresh fruits or vegetables. I also make him GF waffles at home.

text: False

text: False

text: Matched with metadata entry ASD_T1_Family_147

text: gram

text: SBIR BOX 30,31 E5, A1

text: False

text: False

text: Never or less than once per week

text: Developmentally delayed (not clearly autism)

text: False

text: Cannot have a conversation

text: Never

text: Never or less than once per week

text: False

text: Mother's milk diet

text: 7-10 meals per week

text: Omnivorous diet

text: True

text: self restricted diet. He doesn't eat fresh vegetables or fruits.

text: True

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Some eye contact

text: Never

text: False

text: False

text: Not in past year

text: Never

text: Never or less than once per week

text: Tends to have diarrhea

text: True

text: True

text: True

text: True

text: True

text: True

text: Continuous

text: False

text: Case (disease status)

text: Oregon State University

text: live

text: Does not imitate others

text: False

text: True

text: Little to no speech

text: ng/uL

text: microliter

text: Daily

text: Rarely

text: Almost every meal

text: Diarrhea & Constipation & Mucus in stool

text: True

text: Human

text: True

text: Daily

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Rarely

text: Never

text: Never

text: Never

text: Rarely

text: False

text: Caucasian

text: Never

text: No elevated anxiety

text: False

text: Never

text: Highly sensitive to typical sounds

text: Never

text: Never

text: Mild self-harming behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: Bioanalyzer is used to asses quality of pooled library. PhiX control spike-in is 20-15% of final load.

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Constant sleep difficulties

text: False

text: Drinking water is bottled & Drinking water is filtered

text: Peanut (food) & Tree nut (food) & Dairy food & Gluten-containing grain

text: HR

text: 7-10 meals per week

text: Sampled from diaper

text: Never

text: Never

text: False

text: Puerto Vallarta, Mexico (4 days), Panama city, Panama (7 days)

text: Mexico & Panama

text: Understands few or no words

text: Several times weekly

text: 3-4 meals per week

text: Daily

text: Daily

text: Never

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens