text: He eats a gluten/dairy/soy free diet so not many whole grains other than brown rice, He also eats Daiya 'cheese' occasioanlly but that isn't made from milk so I didn't include it in my response for the milk/cheese question.

text: True

text: False

text: Matched with metadata entry:ASD_T1_Family_183

text: gram

text: SBIR BOX 30 E1, E2

text: False

text: False

text: 7-10 meals per week

text: Some developmental delays

text: False

text: Able to have conversation

text: Never

text: Never or less than once per week

text: False

text: Mother's milk diet

text: Almost every meal

text: Omnivorous diet

text: True

text: gluten free, casein free, soy free diet--attempting to reduce inflammation and improve behavior although no actual allergy has been found

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: MAD LAB High Throughput Extraction of DNA using the MagAttract PowerMicrobiome DNA/RNA KF Kit

text: Magnetic Beads

text: Consistent eye contact

text: Rarely

text: False

text: False

text: Not in past year

text: Daily

text: Daily

text: 7-10 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: Sometimes

text: False

text: Case (disease status)

text: True

text: Oregon State University

text: live

text: Imitates others when prompted

text: True

text: False

text: Able to speak fluently

text: ng/uL

text: microliter

text: Daily

text: Daily

text: Almost every meal

text: True

text: Human

text: True

text: Daily

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: True

text: False

text: False

text: False

text: True

text: Regularly

text: Sometimes

text: Sometimes

text: Sometimes

text: Regularly

text: False

text: Caucasian

text: Never

text: No elevated anxiety

text: False

text: Weekly

text: Never

text: Not bothered by typical sounds

text: Weekly

text: Never

text: No self-injurious behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Healthy sleep pattern

text: False

text: Drinking water from well

text: LR

text: Never or less than once per week

text: Less than 1

text: Rarely

text: Rarely

text: Yes, I used the toilet cover when collecting samples from both of my children

text: True

text: Understands many words

text: Daily

text: Almost every meal

text: Never

text: Regularly

text: Weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


status: PUBLIC

text: He gets school lunch 1-3 days/wk depending on what is being served. I didn't count that in the servings of 'premade food' since I believe they cook it all there at school. I classified it as restaurant food instead.

tag: attribute

text: False

text: False

text: Matched with metadata entry:NT_T1_Family_183

text: gram

text: SBIR BOX 30 E1, E2

text: True

text: False

text: 7-10 meals per week

text: False

text: Weekly

text: 3-4 meals per week

text: False

text: Mother's milk diet

text: Almost every meal

text: Omnivorous diet

text: False

text: False

characteristic: External Id

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Never

text: False

text: False

text: Not in past year

text: Daily

text: Daily

text: 7-10 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: True

text: Oregon State University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: True

text: False

text: ng/uL

text: microliter

text: Daily

text: Daily

text: Almost every meal

text: True

text: Human

text: False

text: False

text: False

text: Q5 HotStart High Fidelity DNA Polymerase

text: static

text: Agencourt Ampure XP Beads

text: bead

text: NEB Q5 HotStart High-Fidelity 2x Master Mix

text: Invitrogen Quant-it PicoGreen dsDNA Assay kit

text: Veriti Thermocycler (Applied Biosystems)

text: False

text: False

text: True

text: False

text: False

text: False

text: True

text: Never

text: False

text: Caucasian

text: Rarely

text: No elevated anxiety

text: False

text: Weekly

text: Weekly

text: Never

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: Bioanalyzer is used to asses quality of pooled library. PhiX control spike-in is 20-15% of final load.

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water from well

text: LR

text: Never or less than once per week

text: Weekly

text: Rarely

text: True

text: Daily

text: Almost every meal

text: Never

text: Never

text: Weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: True

text: False

text: Matched with metadata entry:ASD_T3_Family_183

text: gram

text: SBIR BOX 33 A4, A5

text: False

text: False

text: 7-10 meals per week

text: Some developmental delays

text: False

text: Able to have conversation

text: Never

text: Never or less than once per week

text: False

text: Mother's milk diet

text: Almost every meal

text: Omnivorous diet

text: True

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Consistent eye contact

text: Rarely

text: False

text: False

text: Not in past year

text: Daily

text: Daily

text: 7-10 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: Sometimes

text: False

text: Case (disease status)

text: True

text: Oregon State University

text: live

text: Imitates others when prompted

text: True

text: False

text: Able to speak fluently

text: ng/uL

text: microliter

text: Daily

text: Daily

text: Almost every meal

text: True

text: Human

text: True

text: Daily

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: True

text: False

text: False

text: False

text: True

text: Regularly

text: Sometimes

text: Sometimes

text: Sometimes

text: Regularly

text: False

text: Caucasian

text: Never

text: No elevated anxiety

text: False

text: Weekly

text: Never

text: Not bothered by typical sounds

text: Weekly

text: Never

text: No self-injurious behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Healthy sleep pattern

text: False

text: Drinking water from well

text: LR

text: 3-4 meals per week

text: Less than 1

text: Rarely

text: Rarely

text: True

text: Understands many words

text: Daily

text: Almost every meal

text: Never

text: Regularly

text: Weekly

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: False

text: Matched with metadata entry:NT_T3_Family_183

text: gram

text: SBIR BOX 33 A4, A5

text: True

text: False

text: 7-10 meals per week

text: False

text: Weekly

text: 3-4 meals per week

text: False

text: Mother's milk diet

text: Almost every meal

text: Omnivorous diet

text: False

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Never

text: False

text: False

text: Not in past year

text: Daily

text: Daily

text: 7-10 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: False

text: ng/uL

text: microliter

text: Daily

text: Daily

text: Almost every meal

text: True

text: Human

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: True

text: False

text: False

text: False

text: True

text: Never

text: False

text: Caucasian

text: Rarely

text: No elevated anxiety

text: False

text: Weekly

text: Weekly

text: Never

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water from well

text: HR

text: 7-10 meals per week

text: Weekly

text: Rarely

text: True

text: Daily

text: Almost every meal

text: Never

text: Never

text: Weekly

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: True

text: False

text: Matched with metadata entry:ASD_T2_Family_183

text: gram

text: SBIR BOX 32 E1, E2

text: False

text: False

text: 3-4 meals per week

text: Some developmental delays

text: False

text: Able to have conversation

text: Never

text: Never or less than once per week

text: False

text: Mother's milk diet

text: 7-10 meals per week

text: Omnivorous diet

text: True

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Consistent eye contact

text: Rarely

text: False

text: False

text: Not in past year

text: Daily

text: Daily

text: 7-10 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: Sometimes

text: False

text: Case (disease status)

text: True

text: Oregon State University

text: live

text: Imitates others when prompted

text: True

text: False

text: Able to speak fluently

text: ng/uL

text: microliter

text: Daily

text: Daily

text: Almost every meal

text: True

text: Human

text: True

text: Daily

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: True

text: False

text: False

text: False

text: True

text: Regularly

text: Sometimes

text: Sometimes

text: Sometimes

text: Regularly

text: False

text: Caucasian

text: Never

text: No elevated anxiety

text: False

text: Weekly

text: Never

text: Not bothered by typical sounds

text: Weekly

text: Never

text: No self-injurious behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Healthy sleep pattern

text: False

text: Drinking water from well

text: LR

text: 3-4 meals per week

text: Less than 1

text: Rarely

text: Rarely

text: True

text: Understands many words

text: Daily

text: Almost every meal

text: Never

text: Regularly

text: Weekly

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: False

text: Matched with metadata entry:NT_T2_Family_183

text: gram

text: SBIR BOX 32 E1, E2

text: True

text: False

text: 7-10 meals per week

text: False

text: Weekly

text: 3-4 meals per week

text: False

text: Mother's milk diet

text: Almost every meal

text: Omnivorous diet

text: False

text: False

text: ng/microliter

text: uL

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Never

text: False

text: False

text: Not in past year

text: Daily

text: Daily

text: 7-10 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: False

text: ng/uL

text: microliter

text: Daily

text: Daily

text: Almost every meal

text: True

text: Human

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: True

text: False

text: False

text: False

text: True

text: Never

text: False

text: Caucasian

text: Rarely

text: No elevated anxiety

text: False

text: Weekly

text: Weekly

text: Never

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water from well

text: LR

text: 3-4 meals per week

text: Weekly

text: Rarely

text: True

text: Daily

text: Almost every meal

text: Never

text: Never

text: Weekly

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry ASD_T1_Family_097

text: gram

text: True

text: False

text: Never or less than once per week

text: Developmentally delayed (autism)

text: False

text: Cannot have a conversation

text: Daily

text: Almost every meal

text: False

text: Mixed infant formula and mother's milk diet

text: Never or less than once per week

text: Vegan diet

text: False

text: False

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Some eye contact

text: Never

text: False

text: False

text: Year

text: Rarely

text: Never or less than once per week

text: Tends to have constipation

text: False

text: False

text: False

text: False

text: False

text: False

text: Continuous

text: False

text: Case (disease status)

text: Oregon State University

text: live

text: Imitates others when prompted

text: False

text: False

text: Little to no speech

text: ng/uL

text: microliter

text: Rarely

text: Never

text: Never or less than once per week

text: True

text: Human

text: False

text: Rarely

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Rarely

text: Rarely

text: Never

text: Never

text: Rarely

text: False

text: Unknown racial group

text: Rarely

text: No elevated anxiety

text: False

text: Regularly

text: Highly sensitive to typical sounds

text: Weekly

text: Never

text: Mild self-harming behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Some sleep difficulties

text: False

text: Drinking water from city & Drinking water is bottled

text: Almost every meal

text: Sampled from diaper

text: Daily

text: Weekly

text: False

text: Understands most words

text: Weekly

text: Never or less than once per week

text: Never

text: Never

text: Weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry NT_T1_Family_097

text: gram

text: True

text: False

text: 3-4 meals per week

text: False

text: Daily

text: Almost every meal

text: False

text: Never or less than once per week

text: Omnivorous diet

text: False

text: False

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Daily

text: False

text: False

text: Year

text: Daily

text: 3-4 meals per week

text: Tends to have constipation

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: Oregon State University

text: live

text: False

text: False

text: ng/uL

text: microliter

text: Daily

text: Several times weekly

text: 7-10 meals per week

text: False

text: Human

text: False

text: Weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Weekly

text: False

text: Unknown racial group

text: Daily

text: No elevated anxiety

text: False

text: Daily

text: Several times weekly

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Almost every meal

text: Sampled from diaper

text: Several times weekly

text: Weekly

text: False

text: Daily

text: 3-4 meals per week

text: Rarely

text: Rarely

text: Daily

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry ASD_T3_Family_097

text: gram

text: True

text: False

text: Never or less than once per week

text: Developmentally delayed (autism)

text: False

text: Cannot have a conversation

text: Daily

text: Almost every meal

text: False

text: 3-4 meals per week

text: Vegan diet

text: False

text: False

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: MAD LAB High Throughput Extraction of DNA using the MagAttract PowerMicrobiome DNA/RNA KF Kit

text: Magnetic Beads

text: Some eye contact

text: Never

text: False

text: False

text: Year

text: Rarely

text: 3-4 meals per week

text: Tends to have constipation

text: False

text: False

text: False

text: False

text: False

text: False

text: Continuous

text: False

text: Case (disease status)

text: Oregon State University

text: live

text: Imitates others when prompted

text: False

text: False

text: Little to no speech

text: ng/uL

text: microliter

text: Rarely

text: Never

text: Never or less than once per week

text: True

text: Human

text: False

text: Rarely

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Rarely

text: Rarely

text: Never

text: Never

text: Rarely

text: False

text: Unknown racial group

text: Rarely

text: No elevated anxiety

text: False

text: Regularly

text: Highly sensitive to typical sounds

text: Weekly

text: Never

text: Mild self-harming behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Some sleep difficulties

text: False

text: Almost every meal

text: Sampled from diaper

text: Daily

text: Weekly

text: False

text: Understands most words

text: Weekly

text: Never or less than once per week

text: Never

text: Never

text: Weekly

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry NT_T3_Family_097

text: gram

text: True

text: False

text: 3-4 meals per week

text: False

text: Daily

text: Almost every meal

text: False

text: 3-4 meals per week

text: Omnivorous diet

text: False

text: False

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Daily

text: False

text: False

text: Year

text: Daily

text: 3-4 meals per week

text: Tends to have constipation

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: Oregon State University

text: live

text: False

text: False

text: ng/uL

text: microliter

text: Daily

text: Several times weekly

text: 7-10 meals per week

text: False

text: Human

text: False

text: Weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Weekly

text: False

text: Unknown racial group

text: Daily

text: No elevated anxiety

text: False

text: Daily

text: Several times weekly

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: 7-10 meals per week

text: Sampled from diaper

text: Several times weekly

text: Weekly

text: False

text: Daily

text: 3-4 meals per week

text: Rarely

text: Rarely

text: Daily

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry ASD_T2_Family_097

text: gram

text: True

text: False

text: Never or less than once per week

text: Developmentally delayed (autism)

text: False

text: Cannot have a conversation

text: Daily

text: Almost every meal

text: False

text: Never or less than once per week

text: Vegan diet

text: False

text: False

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Some eye contact

text: Never

text: False

text: False

text: Year

text: Rarely

text: Never or less than once per week

text: Tends to have constipation

text: False

text: False

text: False

text: False

text: False

text: False

text: Continuous

text: False

text: Case (disease status)

text: Oregon State University

text: live

text: Imitates others when prompted

text: False

text: False

text: Little to no speech

text: ng/uL

text: microliter

text: Rarely

text: Never

text: Never or less than once per week

text: True

text: Human

text: False

text: Rarely

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Rarely

text: Rarely

text: Never

text: Never

text: Rarely

text: False

text: Unknown racial group

text: Rarely

text: No elevated anxiety

text: False

text: Regularly

text: Highly sensitive to typical sounds

text: Weekly

text: Never

text: Mild self-harming behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Some sleep difficulties

text: False

text: Almost every meal

text: Sampled from diaper

text: Daily

text: Weekly

text: False

text: Understands most words

text: Weekly

text: Never or less than once per week

text: Never

text: Never

text: Weekly

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry NT_T2_Family_097

text: gram

text: True

text: False

text: 3-4 meals per week

text: False

text: Daily

text: 3-4 meals per week

text: False

text: 3-4 meals per week

text: Omnivorous diet

text: False

text: False

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Daily

text: False

text: False

text: Year

text: Daily

text: 3-4 meals per week

text: Tends to have constipation

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: Oregon State University

text: live

text: False

text: False

text: ng/uL

text: microliter

text: Daily

text: Several times weekly

text: 3-4 meals per week

text: False

text: Human

text: False

text: Weekly

text: False

text: False

text: False

text: Q5 HotStart High Fidelity DNA Polymerase

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Weekly

text: False

text: Unknown racial group

text: Daily

text: No elevated anxiety

text: False

text: Daily

text: Several times weekly

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: 3-4 meals per week

text: Sampled from diaper

text: Several times weekly

text: Weekly

text: False

text: Daily

text: 3-4 meals per week

text: Rarely

text: Rarely

text: Daily

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry ASD_T1_Family_093

text: gram

text: False

text: False

text: 3-4 meals per week

text: Developmentally delayed (autism)

text: False

text: Limited conversation ability

text: Never

text: Almost every meal

text: False

text: Mother's milk diet

text: Almost every meal

text: Omnivorous diet

text: True

text: Gluten free, casein free, sugar free, organic diet

text: True

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Some eye contact

text: Rarely

text: False

text: False

text: Not in past year

text: Daily

text: 7-10 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: No issues

text: False

text: Case (disease status)

text: Oregon State University

text: live

text: Imitates others when prompted

text: False

text: False

text: Phrase speech

text: ng/uL

text: microliter

text: Daily

text: Several times weekly

text: Almost every meal

text: True

text: Human

text: False

text: Weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: NEB Q5 HotStart High-Fidelity 2x Master Mix

text: Invitrogen Quant-it PicoGreen dsDNA Assay kit

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Sometimes

text: Rarely

text: Rarely

text: Sometimes

text: Several times weekly

text: False

text: Caucasian

text: Never

text: No elevated anxiety

text: False

text: Sometimes

text: Sensitive to typical sounds

text: Never

text: Rarely

text: No self-injurious behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Healthy sleep pattern

text: False

text: Drinking water from well

text: 3-4 meals per week

text: Never

text: Never

text: Yes, I used the toilet cover when collecting samples from both of my children

text: True

text: Understands nearly all words

text: Daily

text: Almost every meal

text: Daily

text: Daily

text: Never

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: Pastured, grass-fed meats and an all organic, grain-free diet.

text: False

text: True

text: Matched with metadata entry NT_T1_Family_093

text: gram

text: False

text: False

text: 3-4 meals per week

text: False

text: Never

text: Almost every meal

text: False

text: Mother's milk diet

text: Almost every meal

text: Omnivorous diet

text: False

text: False

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Rarely

text: False

text: False

text: Not in past year

text: Daily

text: 7-10 meals per week

text: Tends to have constipation

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: Oregon State University

text: live

text: False

text: False

text: ng/uL

text: microliter

text: Daily

text: Several times weekly

text: Almost every meal

text: False

text: Human

text: False

text: Weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: Veriti Thermocycler (Applied Biosystems)

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Rarely

text: False

text: Caucasian

text: Rarely

text: No elevated anxiety

text: False

text: Never

text: Rarely

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: Bioanalyzer is used to asses quality of pooled library. PhiX control spike-in is 20-15% of final load.

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water from well

text: Dairy food & Apple (food)

text: 3-4 meals per week

text: Less than 1

text: Never

text: Never

text: True

text: Daily

text: Almost every meal

text: Never

text: Rarely

text: Never

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: True

text: True

text: Matched with metadata entry ASD_T1_Family_082

text: gram

text: False

text: False

text: Never or less than once per week

text: Developmentally delayed (not clearly autism)

text: False

text: Cannot have a conversation

text: Weekly

text: 3-4 meals per week

text: False

text: Infant formula diet

text: 3-4 meals per week

text: Omnivorous/avoids red meat diet

text: False

text: True

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Some eye contact

text: Never

text: False

text: False

text: Not in past year

text: Never

text: Never or less than once per week

text: Tends to have normal bowel function

text: False

text: True

text: False

text: False

text: False

text: True

text: Continuous

text: False

text: Case (disease status)

text: False

text: Oregon State University

text: live

text: Imitates others when prompted

text: True

text: False

text: Little to no speech

text: ng/uL

text: microliter

text: Never

text: Never

text: 7-10 meals per week

text: Pain (symptom)

text: True

text: Human

text: False

text: Weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: True

text: True

text: False

text: False

text: False

text: True

text: Rarely

text: Sometimes

text: Rarely

text: Sometimes

text: Daily

text: False

text: Caucasian

text: Never

text: Somewhat elevated anxiety

text: True

text: Sometimes

text: Sensitive to typical sounds

text: Never

text: Never

text: No self-injurious behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Constant sleep difficulties

text: False

text: Drinking water from city

text: Never or less than once per week

text: Sampled from diaper

text: Daily

text: Daily

text: False

text: Understands about half of words

text: Never

text: Never or less than once per week

text: Never

text: Daily

text: Never

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: female

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry NT_T1_Family_082

text: gram

text: False

text: False

text: Never or less than once per week

text: False

text: Rarely

text: 3-4 meals per week

text: False

text: Infant formula diet

text: 3-4 meals per week

text: Omnivorous diet

text: False

text: True

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Never

text: False

text: False

text: Not in past year

text: Daily

text: Weekly

text: Never or less than once per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: 1 (ASD)

text: False

text: ng/uL

text: microliter

text: Daily

text: Rarely

text: 7-10 meals per week

text: False

text: Human

text: False

text: Weekly

text: False

text: True

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: True

text: True

text: False

text: False

text: False

text: True

text: Never

text: False

text: Caucasian

text: Weekly

text: No elevated anxiety

text: True

text: Rarely

text: Never

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water from city

text: 7-10 meals per week

text: Sampled from diaper

text: Weekly

text: Several times weekly

text: False

text: Several times weekly

text: 3-4 meals per week

text: Never

text: Daily

text: Weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: female

text: stool

text: Human sample from Homo sapiens


text: Child only drinks water, loves bread and starchy foods. Sweets mainly consist of fruit snacks.

text: False

text: True

text: Matched with metadata entry ASD_T1_Family_096

text: gram

text: False

text: False

text: Almost every meal

text: False

text: Able to have conversation

text: Weekly

text: Never or less than once per week

text: False

text: Mother's milk diet

text: 3-4 meals per week

text: Omnivorous diet

text: False

text: True

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: MAD LAB High Throughput Extraction of DNA using the MagAttract PowerMicrobiome DNA/RNA KF Kit

text: Magnetic Beads

text: Some eye contact

text: Never

text: False

text: False

text: Not in past year

text: Rarely

text: Several times weekly

text: Almost every meal

text: Tends to have constipation

text: False

text: True

text: False

text: False

text: False

text: True

text: Continuous

text: False

text: Case (disease status)

text: True

text: Oregon State University

text: live

text: Imitates others when prompted

text: True

text: False

text: Able to speak fluently

text: ng/uL

text: microliter

text: Several times weekly

text: Rarely

text: Almost every meal

text: Constipation

text: True

text: Human

text: False

text: Several times weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: False

text: False

text: False

text: True

text: True

text: Sometimes

text: Regularly

text: Regularly

text: Regularly

text: Several times weekly

text: False

text: Caucasian

text: Weekly

text: No elevated anxiety

text: False

text: Never

text: Sensitive to typical sounds

text: Rarely

text: Rarely

text: No self-injurious behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Some sleep difficulties

text: False

text: Drinking water from city

text: 7-10 meals per week

text: Less than 1

text: Several times weekly

text: Never

text: True

text: Understands nearly all words

text: Weekly

text: 7-10 meals per week

text: Never

text: Never

text: Weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: Child primarily eats pastas.

text: False

text: True

text: Matched with metadata entry NT_T1_Family_096

text: gram

text: False

text: False

text: 3-4 meals per week

text: False

text: Weekly

text: 7-10 meals per week

text: False

text: Mother's milk diet

text: 3-4 meals per week

text: Omnivorous diet

text: False

text: False

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Never

text: False

text: False

text: Not in past year

text: Daily

text: Several times weekly

text: Almost every meal

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: True

text: True

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: False

text: ng/uL

text: microliter

text: Several times weekly

text: Rarely

text: 7-10 meals per week

text: Diarrhea

text: False

text: Human

text: False

text: Daily

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: False

text: False

text: False

text: True

text: True

text: Never

text: False

text: Caucasian

text: Rarely

text: No elevated anxiety

text: False

text: Rarely

text: Rarely

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water from city

text: Almost every meal

text: Daily

text: Weekly

text: True

text: Weekly

text: 7-10 meals per week

text: Never

text: Never

text: Weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: Food is limited to certain items he is willing to eat. Stools are generally all loose & due to inability to talk & high pain tolerance unsure if his stomach causes pain

text: False

text: True

text: Matched with metadata entry ASD_T1_Family_090

text: gram

text: False

text: True

text: Almost every meal

text: Developmentally delayed (autism)

text: False

text: Cannot have a conversation

text: Several times weekly

text: Almost every meal

text: False

text: Infant formula diet

text: 7-10 meals per week

text: Omnivorous diet

text: False

text: False

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Some eye contact

text: Rarely

text: False

text: False

text: 6 months

text: Several times weekly

text: Almost every meal

text: Tends to have diarrhea

text: False

text: False

text: False

text: False

text: False

text: False

text: Continuous

text: False

text: Case (disease status)

text: Oregon State University

text: live

text: Imitates others when prompted

text: False

text: False

text: Single word speech

text: ng/uL

text: microliter

text: Several times weekly

text: Rarely

text: Never or less than once per week

text: True

text: Human

text: False

text: Weekly

text: False

text: False

text: False

text: Q5 HotStart High Fidelity DNA Polymerase

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Rarely

text: Rarely

text: Rarely

text: Sometimes

text: Never

text: True

text: Caucasian

text: Several times weekly

text: No elevated anxiety

text: False

text: Regularly

text: Sensitive to typical sounds

text: Rarely

text: Never

text: Dangerous or frequent self-harming behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Some sleep difficulties

text: False

text: Drinking water from city

text: 7-10 meals per week

text: When collection tube opened - dries crystals on outside & specimen didn't seem to mix with solution

text: Sampled from diaper

text: Rarely

text: Weekly

text: False

text: Understands about half of words

text: Several times weekly

text: 3-4 meals per week

text: Never

text: Never

text: Several times weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry NT_T1_Family_090

text: gram

text: False

text: False

text: Almost every meal

text: False

text: Weekly

text: 7-10 meals per week

text: False

text: Infant formula diet

text: 3-4 meals per week

text: Omnivorous diet

text: False

text: False

text: False

text: Child without autism pooped in toilet cover, sample taken from cover & placed in frozen container, toilet cover placed in plastic bag to dispose & then remembered week 1 also needs taken from same sample, bag opened and sample taken from toilet cover tht was in bag

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Never

text: False

text: False

text: Year

text: Several times weekly

text: Almost every meal

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: Oregon State University

text: live

text: False

text: False

text: ng/uL

text: microliter

text: Several times weekly

text: Weekly

text: 3-4 meals per week

text: True

text: Human

text: False

text: Weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: NEB Q5 HotStart High-Fidelity 2x Master Mix

text: Invitrogen Quant-it PicoGreen dsDNA Assay kit

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Never

text: True

text: Caucasian

text: Several times weekly

text: No elevated anxiety

text: False

text: Rarely

text: Weekly

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water from city

text: 7-10 meals per week

text: Toilet hat & sample bagged prior to collecting week 1 sample - had previously collected frozen sample before bagging -- however sample was still obtained from toilet hat within bag

text: Rarely

text: Weekly

text: Yes, I used the toilet cover, but only for my child without autism

text: True

text: Weekly

text: 3-4 meals per week

text: Never

text: Never

text: Several times weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: Loves meat and sugar. Adores hot dogs. Gets addicted to cookies, juice and hot dogs. If he gets gluten and dairy, will eat nothing but bread, cheese and pizza. Normal poos, usually, but went through a long period of two-tone poos - normal brown and gray. This went away when I cut down on fat in his diet (he still gets plenty of fat, I just 'fry' in water now). In other news, he has a chronic itch 'down there' which Dr. thinks is yeast infection. So far it has resisted the clotrimazole cream.

text: False

text: True

text: Matched with metadata entry ASD_T1_Family_099

text: gram

text: False

text: False

text: Never or less than once per week

text: Developmentally delayed (autism)

text: False

text: Limited conversation ability

text: Rarely

text: Never or less than once per week

text: False

text: Mixed infant formula and mother's milk diet

text: Almost every meal

text: Omnivorous diet

text: True

text: no artificial colors, no casein

text: True

text: False

text: With the toilet cover for this child. Diaper for neurotypical kiddo.

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Some eye contact

text: Never

text: False

text: False

text: Not in past year

text: Weekly

text: 7-10 meals per week

text: Tends to have normal bowel function

text: True

text: False

text: False

text: False

text: False

text: True

text: Sometimes

text: False

text: Case (disease status)

text: Oregon State University

text: live

text: Imitates others when prompted

text: False

text: True

text: Able to speak fluently

text: ng/uL

text: microliter

text: Daily

text: Several times weekly

text: 7-10 meals per week

text: Diarrhea & Pain (symptom) & Weight loss (symptom) & Fever

text: False

text: Human

text: True

text: Weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: Veriti Thermocycler (Applied Biosystems)

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Sometimes

text: Rarely

text: Rarely

text: Regularly

text: Never

text: False

text: Caucasian

text: Weekly

text: No elevated anxiety

text: True

text: Regularly

text: Highly sensitive to typical sounds

text: Rarely

text: Weekly

text: Mild self-harming behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: Bioanalyzer is used to asses quality of pooled library. PhiX control spike-in is 20-15% of final load.

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Some sleep difficulties

text: False

text: Drinking water is filtered

text: 3-4 meals per week

text: Daily

text: Weekly

text: Yes, I used the toilet cover, but only for my child with autism

text: True

text: France, 3 weeks

text: France

text: Understands nearly all words

text: Rarely

text: 3-4 meals per week

text: Rarely

text: Rarely

text: Rarely

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: Always either constipation or diarrhea. No normal bowel movements except when switching from constipation to diarrhea or vice versa. Mucousy BMs when constipated (that I can see). Wicked sweet tooth. Very irritable little guy. But not autistic.

text: False

text: True

text: Matched with metadata entry NT_T1_Family_099

text: gram

text: False

text: False

text: 3-4 meals per week

text: True

text: Rarely

text: Never or less than once per week

text: True

text: Mother's milk diet

text: Almost every meal

text: Omnivorous diet

text: True

text: Artificial colors, gluten and casein free, like us all.

text: True

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: MAD LAB High Throughput Extraction of DNA using the MagAttract PowerMicrobiome DNA/RNA KF Kit

text: Magnetic Beads

text: Weekly

text: True

text: True

text: Not in past year

text: Weekly

text: 3-4 meals per week

text: Tends to have constipation

text: False

text: True

text: False

text: False

text: False

text: True

text: False

text: Control (disease status)

text: Oregon State University

text: live

text: False

text: True

text: ng/uL

text: microliter

text: Daily

text: Several times weekly

text: 7-10 meals per week

text: Diarrhea & Constipation & Abdominal bloating & Mucus in stool & Pain (symptom)

text: False

text: Human

text: False

text: Weekly

text: False

text: True

text: False

text: Q5 HotStart High Fidelity DNA Polymerase

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Never

text: True

text: Caucasian

text: Weekly

text: Somewhat elevated anxiety

text: True

text: Rarely

text: Weekly

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water is filtered

text: Sweet potato

text: 7-10 meals per week

text: I scooped a bit of a large scoop. I hope it wasn't too big.

text: Sampled from diaper

text: Daily

text: Weekly

text: False

text: France, 3 weeks

text: France

text: Weekly

text: 3-4 meals per week

text: Rarely

text: Rarely

text: Weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: True

text: True

text: Matched with metadata entry ASD_T2_Family_082

text: gram

text: False

text: False

text: Never or less than once per week

text: Developmentally delayed (not clearly autism)

text: False

text: Cannot have a conversation

text: Weekly

text: 3-4 meals per week

text: False

text: Infant formula diet

text: 7-10 meals per week

text: Omnivorous/avoids red meat diet

text: False

text: True

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Some eye contact

text: Never

text: False

text: False

text: Not in past year

text: Never

text: Never or less than once per week

text: Tends to have normal bowel function

text: False

text: True

text: False

text: False

text: False

text: True

text: Continuous

text: False

text: Case (disease status)

text: False

text: Oregon State University

text: live

text: Imitates others when prompted

text: True

text: False

text: Little to no speech

text: ng/uL

text: microliter

text: Never

text: Never

text: 7-10 meals per week

text: Pain (symptom)

text: True

text: Human

text: False

text: Weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: NEB Q5 HotStart High-Fidelity 2x Master Mix

text: Invitrogen Quant-it PicoGreen dsDNA Assay kit

text: False

text: True

text: True

text: False

text: False

text: False

text: True

text: Rarely

text: Sometimes

text: Rarely

text: Sometimes

text: Daily

text: False

text: Caucasian

text: Never

text: Somewhat elevated anxiety

text: True

text: Sometimes

text: Sensitive to typical sounds

text: Never

text: Never

text: No self-injurious behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Constant sleep difficulties

text: False

text: Drinking water from city

text: 3-4 meals per week

text: Sampled from diaper

text: Daily

text: Daily

text: False

text: Understands about half of words

text: Never

text: Never or less than once per week

text: Never

text: Daily

text: Never

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: female

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry NT_T2_Family_082

text: gram

text: False

text: False

text: 3-4 meals per week

text: False

text: Rarely

text: 3-4 meals per week

text: False

text: Infant formula diet

text: 3-4 meals per week

text: Omnivorous diet

text: False

text: True

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Never

text: False

text: False

text: Not in past year

text: Daily

text: Weekly

text: 3-4 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: 1 (ASD)

text: False

text: ng/uL

text: microliter

text: Daily

text: Rarely

text: 3-4 meals per week

text: False

text: Human

text: False

text: Weekly

text: False

text: True

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: True

text: True

text: False

text: False

text: False

text: True

text: Never

text: False

text: Caucasian

text: Weekly

text: Somewhat elevated anxiety

text: True

text: Rarely

text: Never

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water from city

text: 3-4 meals per week

text: Sampled from diaper

text: Weekly

text: Several times weekly

text: False

text: Several times weekly

text: 3-4 meals per week

text: Never

text: Daily

text: Weekly

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: female

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry ASD_T2_Family_093

text: gram

text: False

text: False

text: Never or less than once per week

text: Developmentally delayed (autism)

text: False

text: Limited conversation ability

text: Never

text: 7-10 meals per week

text: False

text: Mother's milk diet

text: Almost every meal

text: Omnivorous diet

text: True

text: Gluten free, casein free, sugar free, organic diet

text: True

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Some eye contact

text: Rarely

text: False

text: False

text: Not in past year

text: Daily

text: Almost every meal

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: No issues

text: False

text: Case (disease status)

text: Oregon State University

text: live

text: Imitates others when prompted

text: False

text: False

text: Phrase speech

text: ng/uL

text: microliter

text: Daily

text: Several times weekly

text: Almost every meal

text: True

text: Human

text: False

text: Weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Sometimes

text: Rarely

text: Rarely

text: Sometimes

text: Several times weekly

text: True

text: Caucasian

text: Never

text: No elevated anxiety

text: False

text: Sometimes

text: Sensitive to typical sounds

text: Never

text: Rarely

text: No self-injurious behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Healthy sleep pattern

text: False

text: Drinking water from well

text: 3-4 meals per week

text: Pinworms are still showing up and I'm treating with bioray clove tincture and diatomaceous earth.

text: Never

text: Never

text: Yes, I used the toilet cover when collecting samples from both of my children

text: True

text: Understands nearly all words

text: Daily

text: Almost every meal

text: Daily

text: Daily

text: Never

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: Pastured, grass-fed meats and an all organic, grain-free diet.

text: False

text: True

text: Matched with metadata entry NT_T2_Family_093

text: gram

text: False

text: False

text: Never or less than once per week

text: False

text: Never

text: 7-10 meals per week

text: False

text: Mother's milk diet

text: Almost every meal

text: Omnivorous diet

text: False

text: False

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Rarely

text: False

text: False

text: Not in past year

text: Daily

text: Almost every meal

text: Tends to have constipation

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: Oregon State University

text: live

text: False

text: False

text: ng/uL

text: microliter

text: Daily

text: Several times weekly

text: Almost every meal

text: False

text: Human

text: False

text: Weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: Veriti Thermocycler (Applied Biosystems)

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Rarely

text: True

text: Caucasian

text: Rarely

text: No elevated anxiety

text: False

text: Never

text: Rarely

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: Bioanalyzer is used to asses quality of pooled library. PhiX control spike-in is 20-15% of final load.

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water from well

text: Dairy food & Apple (food)

text: 3-4 meals per week

text: Less than 1

text: He was constipated which accounts for the time difference and Pinworms are still showing up and I'm treating with bioray clove tincture and diatomaceous earth.

text: Never

text: Never

text: True

text: Daily

text: Almost every meal

text: Never

text: Rarely

text: Never

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: Child only drinks water, loves bread and starchy foods. Sweets mainly consist of fruit snacks.

text: False

text: True

text: Matched with metadata entry ASD_T2_Family_096

text: gram

text: False

text: False

text: 7-10 meals per week

text: False

text: Able to have conversation

text: Weekly

text: Never or less than once per week

text: False

text: Mother's milk diet

text: 3-4 meals per week

text: Omnivorous diet

text: False

text: True

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: MAD LAB High Throughput Extraction of DNA using the MagAttract PowerMicrobiome DNA/RNA KF Kit

text: Magnetic Beads

text: Some eye contact

text: Never

text: False

text: False

text: Not in past year

text: Rarely

text: Several times weekly

text: Almost every meal

text: Tends to have constipation

text: False

text: True

text: False

text: False

text: False

text: True

text: Continuous

text: False

text: Case (disease status)

text: True

text: Oregon State University

text: live

text: Imitates others when prompted

text: True

text: False

text: Able to speak fluently

text: ng/uL

text: microliter

text: Several times weekly

text: Rarely

text: 7-10 meals per week

text: Constipation

text: True

text: Human

text: False

text: Several times weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: False

text: False

text: False

text: True

text: True

text: Sometimes

text: Regularly

text: Regularly

text: Regularly

text: Several times weekly

text: False

text: Caucasian

text: Weekly

text: No elevated anxiety

text: False

text: Never

text: Sensitive to typical sounds

text: Rarely

text: Rarely

text: No self-injurious behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Some sleep difficulties

text: False

text: Drinking water from city

text: 3-4 meals per week

text: Less than 1

text: Several times weekly

text: Never

text: True

text: Understands nearly all words

text: Weekly

text: Almost every meal

text: Never

text: Never

text: Weekly

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: Child primarily eats pastas.

text: False

text: True

text: Matched with metadata entry NT_T2_Family_096

text: gram

text: False

text: False

text: 3-4 meals per week

text: False

text: Weekly

text: 3-4 meals per week

text: False

text: Mother's milk diet

text: 3-4 meals per week

text: Omnivorous diet

text: False

text: False

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Never

text: False

text: False

text: Not in past year

text: Daily

text: Several times weekly

text: Almost every meal

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: True

text: True

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: False

text: ng/uL

text: microliter

text: Several times weekly

text: Rarely

text: 7-10 meals per week

text: Diarrhea

text: False

text: Human

text: False

text: Daily

text: False

text: False

text: False

text: Q5 HotStart High Fidelity DNA Polymerase

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: False

text: False

text: False

text: True

text: True

text: Never

text: False

text: Caucasian

text: Rarely

text: No elevated anxiety

text: False

text: Rarely

text: Rarely

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water from city

text: Almost every meal

text: Daily

text: Weekly

text: True

text: Weekly

text: 7-10 meals per week

text: Never

text: Never

text: Weekly

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: Loves meat and sugar. Adores hot dogs. Gets addicted to cookies, juice and hot dogs. If he gets gluten and dairy, will eat nothing but bread, cheese and pizza. Normal poos, usually, but went through a long period of two-tone poos - normal brown and gray. This went away when I cut down on fat in his diet (he still gets plenty of fat, I just 'fry' in water now). In other news, he has a chronic itch 'down there' which Dr. thinks is yeast infection. So far it has resisted the clotrimazole cream.

text: False

text: True

text: Matched with metadata entry ASD_T2_Family_099

text: gram

text: False

text: False

text: Never or less than once per week

text: Developmentally delayed (autism)

text: False

text: Limited conversation ability

text: Rarely

text: Never or less than once per week

text: False

text: Mixed infant formula and mother's milk diet

text: 7-10 meals per week

text: Omnivorous diet

text: True

text: no artificial colors, no casein

text: True

text: False

text: From the toilet cover in the toilet.

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Some eye contact

text: Never

text: False

text: False

text: Not in past year

text: Weekly

text: Never or less than once per week

text: Tends to have normal bowel function

text: True

text: False

text: False

text: False

text: False

text: True

text: Sometimes

text: False

text: Case (disease status)

text: Oregon State University

text: live

text: Imitates others when prompted

text: False

text: True

text: Able to speak fluently

text: ng/uL

text: microliter

text: Daily

text: Several times weekly

text: 7-10 meals per week

text: Diarrhea & Pain (symptom) & Weight loss (symptom) & Fever

text: False

text: Human

text: True

text: Weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: NEB Q5 HotStart High-Fidelity 2x Master Mix

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Sometimes

text: Rarely

text: Rarely

text: Regularly

text: Never

text: False

text: Caucasian

text: Weekly

text: No elevated anxiety

text: False

text: Regularly

text: Highly sensitive to typical sounds

text: Rarely

text: Weekly

text: Mild self-harming behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Some sleep difficulties

text: False

text: Drinking water is filtered

text: 3-4 meals per week

text: Daily

text: Weekly

text: Yes, I used the toilet cover, but only for my child with autism

text: True

text: France, 3 weeks

text: France

text: Understands nearly all words

text: Rarely

text: Never or less than once per week

text: Rarely

text: Rarely

text: Rarely

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: Always either constipation or diarrhea. No normal bowel movements except when switching from constipation to diarrhea or vice versa. Mucousy BMs when constipated (that I can see). Wicked sweet tooth. Very irritable little guy. But not autistic.

text: False

text: True

text: Matched with metadata entry NT_T2_Family_099

text: gram

text: False

text: False

text: 7-10 meals per week

text: False

text: Rarely

text: 3-4 meals per week

text: False

text: Mother's milk diet

text: 3-4 meals per week

text: Omnivorous diet

text: True

text: Artificial colors, gluten and casein free, like us all.

text: True

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Weekly

text: False

text: False

text: Not in past year

text: Weekly

text: 3-4 meals per week

text: Tends to have constipation

text: False

text: True

text: False

text: False

text: False

text: True

text: False

text: Control (disease status)

text: Oregon State University

text: live

text: False

text: True

text: ng/uL

text: microliter

text: Daily

text: Several times weekly

text: 7-10 meals per week

text: Diarrhea & Constipation & Abdominal bloating & Mucus in stool & Pain (symptom)

text: False

text: Human

text: False

text: Weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: Invitrogen Quant-it PicoGreen dsDNA Assay kit

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Never

text: False

text: Caucasian

text: Weekly

text: Elevated anxiety

text: False

text: Rarely

text: Weekly

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water is filtered

text: Sweet potato

text: 3-4 meals per week

text: Sampled from diaper

text: Daily

text: Weekly

text: False

text: France, 3 weeks

text: France

text: Weekly

text: 3-4 meals per week

text: Rarely

text: Rarely

text: Weekly

text: Timepoint 2

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry ASD_T3_Family_093

text: gram

text: False

text: False

text: Never or less than once per week

text: Developmentally delayed (autism)

text: False

text: Limited conversation ability

text: Never

text: 3-4 meals per week

text: False

text: Mother's milk diet

text: Almost every meal

text: Omnivorous diet

text: True

text: Gluten free, casein free, sugar free, organic diet

text: True

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Some eye contact

text: Rarely

text: False

text: False

text: Not in past year

text: Daily

text: 7-10 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: No issues

text: False

text: Case (disease status)

text: Oregon State University

text: live

text: Imitates others when prompted

text: False

text: False

text: Phrase speech

text: ng/uL

text: microliter

text: Daily

text: Several times weekly

text: Almost every meal

text: True

text: Human

text: False

text: Weekly

text: False

text: True

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: Veriti Thermocycler (Applied Biosystems)

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Sometimes

text: Rarely

text: Rarely

text: Sometimes

text: Several times weekly

text: True

text: Caucasian

text: Never

text: Somewhat elevated anxiety

text: True

text: Sometimes

text: Sensitive to typical sounds

text: Never

text: Rarely

text: No self-injurious behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: Bioanalyzer is used to asses quality of pooled library. PhiX control spike-in is 20-15% of final load.

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Healthy sleep pattern

text: False

text: Drinking water from well

text: 7-10 meals per week

text: There will be norovirus in the stool sample

text: Never

text: Never

text: Yes, I used the toilet cover when collecting samples from both of my children

text: True

text: Understands nearly all words

text: Daily

text: Almost every meal

text: Daily

text: Daily

text: Never

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: Pastured, grass-fed meats and an all organic, grain-free diet.

text: False

text: True

text: Matched with metadata entry NT_T3_Family_093

text: gram

text: False

text: False

text: Never or less than once per week

text: False

text: Never

text: 3-4 meals per week

text: False

text: Mother's milk diet

text: Almost every meal

text: Omnivorous diet

text: False

text: False

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: MAD LAB High Throughput Extraction of DNA using the MagAttract PowerMicrobiome DNA/RNA KF Kit

text: Magnetic Beads

text: Rarely

text: False

text: False

text: Not in past year

text: Daily

text: 7-10 meals per week

text: Tends to have constipation

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: Oregon State University

text: live

text: False

text: False

text: ng/uL

text: microliter

text: Daily

text: Several times weekly

text: Almost every meal

text: False

text: Human

text: False

text: Weekly

text: False

text: True

text: False

text: Q5 HotStart High Fidelity DNA Polymerase

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Rarely

text: True

text: Caucasian

text: Rarely

text: No elevated anxiety

text: True

text: Never

text: Rarely

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water from well

text: Dairy food & Apple (food)

text: 7-10 meals per week

text: Less than 1

text: There will be norovirus in the sample

text: Never

text: Never

text: True

text: Daily

text: Almost every meal

text: Never

text: Rarely

text: Never

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: True

text: True

text: Matched with metadata entry ASD_T3_Family_082

text: gram

text: False

text: False

text: 3-4 meals per week

text: Developmentally delayed (not clearly autism)

text: False

text: Cannot have a conversation

text: Weekly

text: Never or less than once per week

text: False

text: Infant formula diet

text: 3-4 meals per week

text: Omnivorous/avoids red meat diet

text: False

text: True

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Some eye contact

text: Never

text: False

text: False

text: Not in past year

text: Never

text: Never or less than once per week

text: Tends to have normal bowel function

text: False

text: True

text: False

text: False

text: False

text: True

text: Continuous

text: False

text: Case (disease status)

text: False

text: Oregon State University

text: live

text: Imitates others when prompted

text: True

text: False

text: Little to no speech

text: ng/uL

text: microliter

text: Never

text: Never

text: 3-4 meals per week

text: Pain (symptom)

text: True

text: Human

text: False

text: Weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: NEB Q5 HotStart High-Fidelity 2x Master Mix

text: False

text: True

text: True

text: False

text: False

text: False

text: True

text: Rarely

text: Sometimes

text: Rarely

text: Sometimes

text: Daily

text: False

text: Caucasian

text: Never

text: No elevated anxiety

text: False

text: Sometimes

text: Sensitive to typical sounds

text: Never

text: Never

text: No self-injurious behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Constant sleep difficulties

text: False

text: Drinking water from city

text: 3-4 meals per week

text: Sampled from diaper

text: Daily

text: Daily

text: False

text: Understands about half of words

text: Never

text: Never or less than once per week

text: Never

text: Daily

text: Never

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: female

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry NT_T3_Family_082

text: gram

text: False

text: False

text: 3-4 meals per week

text: False

text: Rarely

text: 3-4 meals per week

text: False

text: Infant formula diet

text: 3-4 meals per week

text: Omnivorous diet

text: False

text: True

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Never

text: False

text: False

text: Not in past year

text: Daily

text: Weekly

text: 7-10 meals per week

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: 1 (ASD)

text: False

text: ng/uL

text: microliter

text: Daily

text: Rarely

text: 7-10 meals per week

text: False

text: Human

text: False

text: Weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: True

text: True

text: False

text: False

text: False

text: True

text: Never

text: False

text: Caucasian

text: Weekly

text: No elevated anxiety

text: False

text: Rarely

text: Never

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water from city

text: 7-10 meals per week

text: Sampled from diaper

text: Weekly

text: Several times weekly

text: False

text: Several times weekly

text: 3-4 meals per week

text: Never

text: Daily

text: Weekly

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: female

text: stool

text: Human sample from Homo sapiens


text: Child only drinks water, loves bread and starchy foods. Sweets mainly consist of fruit snacks.

text: False

text: True

text: Matched with metadata entry ASD_T3_Family_096

text: gram

text: False

text: False

text: 7-10 meals per week

text: False

text: Able to have conversation

text: Weekly

text: Never or less than once per week

text: False

text: Mother's milk diet

text: 3-4 meals per week

text: Omnivorous diet

text: False

text: True

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Some eye contact

text: Never

text: False

text: False

text: Not in past year

text: Rarely

text: Several times weekly

text: Almost every meal

text: Tends to have constipation

text: False

text: True

text: False

text: False

text: False

text: True

text: Continuous

text: False

text: Case (disease status)

text: True

text: Oregon State University

text: live

text: Imitates others when prompted

text: True

text: False

text: Able to speak fluently

text: ng/uL

text: microliter

text: Several times weekly

text: Rarely

text: 7-10 meals per week

text: Constipation

text: True

text: Human

text: False

text: Several times weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: False

text: False

text: False

text: True

text: True

text: Sometimes

text: Regularly

text: Regularly

text: Regularly

text: Several times weekly

text: False

text: Caucasian

text: Weekly

text: Elevated anxiety

text: False

text: Never

text: Sensitive to typical sounds

text: Rarely

text: Rarely

text: No self-injurious behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Some sleep difficulties

text: False

text: Drinking water from city

text: 3-4 meals per week

text: Less than 1

text: Several times weekly

text: Never

text: True

text: Understands nearly all words

text: Weekly

text: 7-10 meals per week

text: Never

text: Never

text: Weekly

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: Child primarily eats pastas.

text: False

text: True

text: Matched with metadata entry NT_T3_Family_096

text: gram

text: False

text: False

text: 3-4 meals per week

text: False

text: Weekly

text: 7-10 meals per week

text: False

text: Mother's milk diet

text: 3-4 meals per week

text: Omnivorous diet

text: False

text: False

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Never

text: False

text: False

text: Not in past year

text: Daily

text: Several times weekly

text: Almost every meal

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: True

text: True

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: False

text: ng/uL

text: microliter

text: Several times weekly

text: Rarely

text: 3-4 meals per week

text: Diarrhea

text: False

text: Human

text: False

text: Daily

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: Invitrogen Quant-it PicoGreen dsDNA Assay kit

text: False

text: False

text: False

text: False

text: False

text: False

text: True

text: Never

text: False

text: Caucasian

text: Rarely

text: No elevated anxiety

text: False

text: Rarely

text: Rarely

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water from city

text: Almost every meal

text: Daily

text: Weekly

text: True

text: Weekly

text: 7-10 meals per week

text: Never

text: Never

text: Weekly

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: Loves meat and sugar. Adores hot dogs. Gets addicted to cookies, juice and hot dogs. If he gets gluten and dairy, will eat nothing but bread, cheese and pizza. Normal poos, usually, but went through a long period of two-tone poos - normal brown and gray. This went away when I cut down on fat in his diet (he still gets plenty of fat, I just 'fry' in water now). In other news, he has a chronic itch 'down there' which Dr. thinks is yeast infection. So far it has resisted the clotrimazole cream.

text: False

text: True

text: Matched with metadata entry ASD_T3_Family_099

text: gram

text: False

text: False

text: 7-10 meals per week

text: Developmentally delayed (autism)

text: False

text: Limited conversation ability

text: Rarely

text: Never or less than once per week

text: False

text: Mixed infant formula and mother's milk diet

text: 7-10 meals per week

text: Omnivorous diet

text: True

text: no artificial colors, no casein

text: True

text: False

text: Caught a poop in the toilet cover.

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Some eye contact

text: Never

text: False

text: False

text: Not in past year

text: Weekly

text: 3-4 meals per week

text: Tends to have normal bowel function

text: True

text: False

text: False

text: False

text: False

text: True

text: Sometimes

text: False

text: Case (disease status)

text: Oregon State University

text: live

text: Imitates others when prompted

text: False

text: True

text: Able to speak fluently

text: ng/uL

text: microliter

text: Daily

text: Several times weekly

text: 7-10 meals per week

text: Diarrhea & Pain (symptom) & Weight loss (symptom) & Fever

text: False

text: Human

text: True

text: Weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Sometimes

text: Rarely

text: Rarely

text: Regularly

text: Never

text: False

text: Caucasian

text: Weekly

text: No elevated anxiety

text: False

text: Regularly

text: Highly sensitive to typical sounds

text: Rarely

text: Weekly

text: Mild self-harming behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Some sleep difficulties

text: False

text: Drinking water is filtered

text: 3-4 meals per week

text: Daily

text: Weekly

text: Yes, I used the toilet cover, but only for my child with autism

text: True

text: France, 3 weeks

text: France

text: Understands nearly all words

text: Rarely

text: 3-4 meals per week

text: Rarely

text: Rarely

text: Rarely

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: Always either constipation or diarrhea. No normal bowel movements except when switching from constipation to diarrhea or vice versa. Mucousy BMs when constipated (that I can see). Wicked sweet tooth. Very irritable little guy. But not autistic.

text: False

text: True

text: Matched with metadata entry NT_T3_Family_099

text: gram

text: False

text: False

text: 7-10 meals per week

text: False

text: Rarely

text: Never or less than once per week

text: False

text: Mother's milk diet

text: 7-10 meals per week

text: Omnivorous diet

text: True

text: Artificial colors, gluten and casein free, like us all.

text: True

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Weekly

text: False

text: False

text: Not in past year

text: Weekly

text: 7-10 meals per week

text: Tends to have constipation

text: False

text: True

text: False

text: False

text: False

text: True

text: False

text: Control (disease status)

text: Oregon State University

text: live

text: False

text: True

text: ng/uL

text: microliter

text: Daily

text: Several times weekly

text: 3-4 meals per week

text: Diarrhea & Constipation & Abdominal bloating & Mucus in stool & Pain (symptom)

text: False

text: Human

text: False

text: Weekly

text: False

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: Veriti Thermocycler (Applied Biosystems)

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Never

text: False

text: Caucasian

text: Weekly

text: No elevated anxiety

text: False

text: Rarely

text: Weekly

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: Bioanalyzer is used to asses quality of pooled library. PhiX control spike-in is 20-15% of final load.

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water is filtered

text: Sweet potato

text: Almost every meal

text: Sampled from diaper

text: Daily

text: Weekly

text: False

text: France, 3 weeks

text: France

text: Weekly

text: 3-4 meals per week

text: Rarely

text: Rarely

text: Weekly

text: Timepoint 3

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: False

text: Matched with metadata entry:NT_T1_Family_184

text: gram

text: False

text: False

text: Almost every meal

text: False

text: Daily

text: 7-10 meals per week

text: False

text: Mother's milk diet

text: 3-4 meals per week

text: Omnivorous diet

text: False

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: MAD LAB High Throughput Extraction of DNA using the MagAttract PowerMicrobiome DNA/RNA KF Kit

text: Magnetic Beads

text: Never

text: False

text: False

text: Not in past year

text: Daily

text: Daily

text: Almost every meal

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: True

text: Oregon State University

text: live

text: True

text: False

text: ng/uL

text: microliter

text: Daily

text: Weekly

text: 7-10 meals per week

text: False

text: Human

text: False

text: Rarely

text: False

text: False

text: Q5 HotStart High Fidelity DNA Polymerase

text: static

text: Agencourt Ampure XP Beads

text: bead

text: NEB Q5 HotStart High-Fidelity 2x Master Mix

text: False

text: False

text: True

text: False

text: False

text: False

text: True

text: Regularly

text: False

text: Caucasian

text: Rarely

text: No elevated anxiety

text: False

text: Rarely

text: Weekly

text: Never

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water from city & Drinking water is filtered

text: 3-4 meals per week

text: Several times weekly

text: Never

text: Yes, I used the toilet cover when collecting samples from both of my children

text: True

text: Daily

text: Almost every meal

text: Never

text: Never

text: Daily

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: Our son eats cucumbers, carrots, sweet peppers, PBJ sandwiches, granola bars, yogurt, salami sandwiches, popcorn chicken, rolls, breadsticks, cantaloupe, strawberries, waffles, pancakes, blueberries, chips, fries, crispy bacon. This is pretty much his diet. He hates melted cheese and soft textures usually.

text: False

text: False

text: Matched with metadata entry:ASD_T1_Family_184

text: gram

text: False

text: False

text: Almost every meal

text: Some developmental delays

text: False

text: Able to have conversation

text: Never

text: 3-4 meals per week

text: False

text: Mother's milk diet

text: 3-4 meals per week

text: Omnivorous diet

text: True

text: He has sensory issues, so he avoids a lot of protein and softer foods. He eats raw fruits and vegetables mostly along with a lot of starches/carbs

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Consistent eye contact

text: Never

text: False

text: False

text: Not in past year

text: Weekly

text: Daily

text: Almost every meal

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: No issues

text: False

text: Case (disease status)

text: True

text: Oregon State University

text: live

text: Imitates actions or gestures of others

text: True

text: False

text: Able to speak fluently

text: ng/uL

text: microliter

text: Daily

text: Weekly

text: 3-4 meals per week

text: False

text: Human

text: False

text: Never

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: Invitrogen Quant-it PicoGreen dsDNA Assay kit

text: False

text: False

text: True

text: False

text: False

text: False

text: True

text: Regularly

text: Sometimes

text: Sometimes

text: Sometimes

text: Rarely

text: True

text: Caucasian

text: Never

text: No elevated anxiety

text: False

text: Never

text: Never

text: Sensitive to typical sounds

text: Rarely

text: Never

text: Mild self-harming behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Healthy sleep pattern

text: False

text: 3-4 meals per week

text: I didn't know that week one needed to be the same as the frozen amount. I took some from the frozen sample and put that in the preservative sample

text: Several times weekly

text: Rarely

text: True

text: Understands nearly all words

text: Daily

text: Almost every meal

text: Never

text: Never

text: Daily

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: We take ruteri daily

text: False

text: False

text: Matched with metadata entry:ASD_T1_Family_186

text: gram

text: False

text: False

text: Never or less than once per week

text: Developmentally delayed (not clearly autism)

text: False

text: Difficulty with conversation

text: Several times weekly

text: Almost every meal

text: False

text: Mother's milk diet

text: 3-4 meals per week

text: Omnivorous/avoids red meat diet

text: True

text: Try to eat organic non gmo foods but not all thr time

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Some eye contact

text: Rarely

text: False

text: False

text: Not in past year

text: Several times weekly

text: 7-10 meals per week

text: Tends to have diarrhea

text: False

text: False

text: False

text: False

text: False

text: False

text: No issues

text: False

text: Case (disease status)

text: Oregon State University

text: live

text: Imitates others when prompted

text: False

text: False

text: Single word speech

text: ng/uL

text: microliter

text: Weekly

text: Daily

text: Almost every meal

text: False

text: Human

text: False

text: Weekly

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Never

text: Sometimes

text: Sometimes

text: Sometimes

text: Regularly

text: False

text: Caucasian

text: Several times weekly

text: No elevated anxiety

text: True

text: Never

text: Regularly

text: Sensitive to typical sounds

text: Weekly

text: Rarely

text: No self-injurious behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Healthy sleep pattern

text: False

text: Drinking water from city

text: 3-4 meals per week

text: Sampled from diaper

text: Several times weekly

text: Never

text: False

text: Understands about half of words

text: Weekly

text: 3-4 meals per week

text: Never

text: Never

text: Weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: We take ruteri

text: False

text: False

text: Matched with metadata entry:NT_T1_Family_186

text: gram

text: False

text: False

text: False

text: Several times weekly

text: False

text: Mother's milk diet

text: Never or less than once per week

text: Omnivorous diet

text: True

text: Organic we try to eat non gmo

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Weekly

text: False

text: False

text: Not in past year

text: Several times weekly

text: 3-4 meals per week

text: Tends to have diarrhea

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: Oregon State University

text: live

text: False

text: False

text: ng/uL

text: microliter

text: Weekly

text: Several times weekly

text: 3-4 meals per week

text: False

text: Human

text: False

text: Weekly

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Regularly

text: False

text: Caucasian

text: Several times weekly

text: No elevated anxiety

text: False

text: Never

text: Weekly

text: Rarely

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Drinking water from city

text: 3-4 meals per week

text: Sampled from diaper

text: Several times weekly

text: Never

text: False

text: Weekly

text: Never or less than once per week

text: Never

text: Never

text: Weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry:ASD_T1_Family_188

text: gram

text: False

text: False

text: 3-4 meals per week

text: Uncertain about behavioral development

text: False

text: Limited conversation ability

text: Daily

text: 3-4 meals per week

text: False

text: Mixed infant formula and mother's milk diet

text: 3-4 meals per week

text: Omnivorous diet

text: False

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: Magnetic Beads

text: Some eye contact

text: Never

text: False

text: False

text: 6 months

text: Daily

text: Almost every meal

text: Tends to have normal bowel function

text: False

text: False

text: False

text: False

text: False

text: False

text: No issues

text: False

text: Case (disease status)

text: Oregon State University

text: live

text: Imitates others when prompted

text: False

text: False

text: Phrase speech

text: ng/uL

text: microliter

text: Several times weekly

text: Several times weekly

text: 7-10 meals per week

text: True

text: Human

text: False

text: Several times weekly

text: False

text: False

text: static

text: Agencourt Ampure XP Beads

text: bead

text: Veriti Thermocycler (Applied Biosystems)

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Regularly

text: Sometimes

text: Rarely

text: Sometimes

text: Never

text: False

text: Hispanic & Asian race

text: Never

text: No elevated anxiety

text: False

text: Weekly

text: Sometimes

text: Sensitive to typical sounds

text: Weekly

text: Never

text: No self-injurious behavior

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: Healthy sleep pattern

text: False

text: Drinking water from city & Drinking water is bottled & Drinking water is filtered

text: 7-10 meals per week

text: Several times weekly

text: Weekly

text: True

text: Understands many words

text: Several times weekly

text: 3-4 meals per week

text: Never

text: Never

text: Weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: A

text: male

text: stool

text: Human sample from Homo sapiens


text: False

text: True

text: Matched with metadata entry:NT_T1_Family_188

text: gram

text: False

text: False

text: 3-4 meals per week

text: False

text: Daily

text: 7-10 meals per week

text: False

text: 3-4 meals per week

text: Omnivorous diet

text: False

text: False

text: ng/uL

text: microliter

text: Glass

text: gDNA

text: MagAttract PowerMicrobiome DNA/RNA KF

text: RNAse-Free Water

text: MAD LAB High Throughput Extraction of DNA using the MagAttract PowerMicrobiome DNA/RNA KF Kit

text: Magnetic Beads

text: Never

text: False

text: False

text: 6 months

text: Several times weekly

text: 3-4 meals per week

text: Tends to have constipation

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Control (disease status)

text: Oregon State University

text: live

text: False

text: False

text: ng/uL

text: microliter

text: Several times weekly

text: Weekly

text: 7-10 meals per week

text: True

text: Human

text: False

text: Several times weekly

text: True

text: False

text: Q5 HotStart High Fidelity DNA Polymerase

text: static

text: Agencourt Ampure XP Beads

text: bead

text: False

text: False

text: False

text: False

text: False

text: False

text: False

text: Never

text: False

text: Hispanic & Asian race

text: Never

text: No elevated anxiety

text: True

text: Weekly

text: Weekly

text: Never

text: SG Soil Lab Sequencing Protocol

text: Illumina MiSeq

text: pmol/L

text: Bioanalyzer is used to asses quality of pooled library. PhiX control spike-in is 20-15% of final load.

text: MiSeq Reagent Kit v3 (600 cycle)

text: nmol/L

text: False

text: False

text: Peanut (food) & Tree nut (food) & Soybean (food) & Corn (food) & Banana (food) & Egg

text: 7-10 meals per week

text: Several times weekly

text: Rarely

text: True

text: Several times weekly

text: 7-10 meals per week

text: Never

text: Never

text: Weekly

text: Timepoint 1

text: months

text: not applicable

text: not applicable

text: Homo sapiens

text: N

text: female

text: stool

text: Human sample from Homo sapiens