text: University of Exeter

text: live

text: Microbe, viral or environmental

text: Kenya

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8416A

text: Genome sequencing of Xcc WHRI 8416A


status: PUBLIC

characteristic: External Id

text: University of Exeter

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

tag: attribute

characteristic: Race

characteristic: SRA accession

text: Tanzania

text: Brassica oleracea

characteristic: host

text: Xanthomonas campestris pv. campestris

characteristic: organism

text: campestris

characteristic: pathovar

text: Cell culture

text: WHRI 8596

characteristic: strain

text: Genome sequencing of Xcc WHRI 8596

characteristic: title


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: Kenya

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8662

text: Genome sequencing of Xcc WHRI 8662


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: Kenya

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8737

text: Genome sequencing of Xcc WHRI 8737


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: Tanzania

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8401

text: Genome sequencing of Xcc WHRI 8401


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: Kenya

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8420A

text: Genome sequencing of Xcc WHRI 8420A


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: Uganda

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8618

text: Genome sequencing of Xcc WHRI 8618


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: Kenya

text: Brassica

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8668

text: Genome sequencing of Xcc WHRI 8668


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: Kenya

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8746

text: Genome sequencing of Xcc WHRI 8746


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: not collected

text: not collected

text: Tanzania

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8402

text: Genome sequencing of Xcc WHRI 8402


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: Kenya

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8423A

text: Genome sequencing of Xcc WHRI 8423A


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: Uganda

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8622

text: Genome sequencing of Xcc WHRI 8622


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: Kenya

text: Brassica

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8688

text: Genome sequencing of Xcc WHRI 8688


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: Kenya

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8758

text: Genome sequencing of Xcc WHRI 8758


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: not collected

text: United Kingdom

text: Erysimum

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 10040

text: Genome sequencing of Xcc WHRI 10040


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: not collected

text: Tanzania

text: Brassica rapa

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8403

text: Genome sequencing of Xcc WHRI 8403


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: United Kingdom

text: Brassica rapa

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8497

text: Genome sequencing of Xcc WHRI 8497


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: Uganda

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8629

text: Genome sequencing of Xcc WHRI 8629


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: Kenya

text: Brassica

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8709

text: Genome sequencing of Xcc WHRI 8709


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: Kenya

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8759

text: Genome sequencing of Xcc WHRI 8759


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: not collected

text: United Kingdom

text: Erysimum

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 10042

text: Genome sequencing of Xcc WHRI 10042


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: Honduras

text: Brassica

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8868

text: Genome sequencing of Xcc WHRI 8868


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: not collected

text: not collected

text: Tanzania

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8404

text: Genome sequencing of Xcc WHRI 8404


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: United Kingdom

text: Brassica rapa

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8500

text: Genome sequencing of Xcc WHRI 8500


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: Uganda

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8646

text: Genome sequencing of Xcc WHRI 8646


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: Kenya

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8713

text: Genome sequencing of Xcc WHRI 8713


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: Kenya

text: Brassica

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8763

text: Genome sequencing of Xcc WHRI 8763


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: United Kingdom

text: Brassica napus

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 10030A

text: Genome sequencing of Xcc WHRI 10030A


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: not collected

text: USA:Hawaii

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8405

text: Genome sequencing of Xcc WHRI 8405


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: Tanzania

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8539

text: Genome sequencing of Xcc WHRI 8539


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: Kenya

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8648

text: Genome sequencing of Xcc WHRI 8648


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: Kenya

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8779

text: Genome sequencing of Xcc WHRI 8779


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: Kenya

text: Brassica

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8721

text: Genome sequencing of Xcc WHRI 8721


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: United Kingdom

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 10033A

text: Genome sequencing of Xcc WHRI 10033A


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: not collected

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8409

text: Genome sequencing of Xcc WHRI 8409


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: Tanzania

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8541

text: Genome sequencing of Xcc WHRI 8541


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: United Kingdom

text: Brassica napus

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8892A

text: Genome sequencing of Xcc WHRI 8892A


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: not collected

text: United Kingdom

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8894

text: Genome sequencing of Xcc WHRI 8894


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: not collected

text: United Kingdom

text: Brassica napus

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8895

text: Genome sequencing of Xcc WHRI 8895


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: United Kingdom

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8952A

text: Genome sequencing of Xcc WHRI 8952A


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: United Kingdom

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8966

text: Genome sequencing of Xcc WHRI 8966


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: United Kingdom

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8968

text: Genome sequencing of Xcc WHRI 8968


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: United Kingdom

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8975A

text: Genome sequencing of Xcc WHRI 8975A


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: not collected

text: United Kingdom

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8976

text: Genome sequencing of Xcc WHRI 8976


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: United Kingdom

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8978

text: Genome sequencing of Xcc WHRI 8978


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: United Kingdom

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8979

text: Genome sequencing of Xcc WHRI 8979


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: United Kingdom

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8980

text: Genome sequencing of Xcc WHRI 8980


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: United Kingdom

text: Brassica napus

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 8981

text: Genome sequencing of Xcc WHRI 8981


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: United Kingdom

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 10018A

text: Genome sequencing of Xcc WHRI 10018A


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: United Kingdom

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 10018B

text: Genome sequencing of Xcc WHRI 10018B


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: United Kingdom

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 10019A

text: Genome sequencing of Xcc WHRI 10019A


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: United Kingdom

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 10019C

text: Genome sequencing of Xcc WHRI 10019C


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: United Kingdom

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 10020A

text: Genome sequencing of Xcc WHRI 10020A


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: United Kingdom

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 10021A

text: Genome sequencing of Xcc WHRI 10021A


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: United Kingdom

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 10021B

text: Genome sequencing of Xcc WHRI 10021B


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: Portugal

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 10023A

text: Genome sequencing of Xcc WHRI 10023A


text: University of Exeter

text: live

text: Microbe, viral or environmental

text: Portugal

text: Brassica oleracea

text: Xanthomonas campestris pv. campestris

text: campestris

text: Cell culture

text: WHRI 10024A

text: Genome sequencing of Xcc WHRI 10024A


text: UT MD Anderson Cancer Center

text: live

text: Metagenome or environmental

text: USA:Houston

text: Homo sapiens

text: feces

text: 29.7604 N 95.3698 W

text: gut metagenome


text: Centers for Disease Control and Prevention Enteric Diseases Laboratory Branch

text: live

text: Pathogen.cl

text: CDC

text: USA

text: missing

text: missing

text: missing

characteristic: isolate

text: missing

text: missing

text: missing

text: Vibrio cholerae

text: PulseNet

text: missing

text: missing

characteristic: serovar

text: human

text: Vibrio cholerae


characteristic: External Id

text: IPSP

text: live

text: Metagenome or environmental

text: Italy:Prato

text: urban soil

text: 43.88 N 11.09 E

text: soil metagenome

characteristic: replicate


text: University of North Carolina at Charlotte

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: IGHM

characteristic: Immunoglobulin Isotype

text: Human

characteristic: age

text: Laboratorio de Genetica Molecular Humana, Federal University of Parana, Brazil

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

characteristic: disease

text: Healthy controls (Non-endemic)

text: Brazil: PR

text: not applicable

text: Homo sapiens

text: female

characteristic: sex

text: Peripheral blood

characteristic: tissue

text: Human sample from Homo sapiens

text: No immunosupressive treatment

characteristic: treatment


characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: IGHM

text: Human

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

text: Healthy controls (Endemic)

text: Brazil: MS

text: not applicable

text: Homo sapiens

text: female

text: Peripheral blood

text: Human sample from Homo sapiens

text: No immunosupressive treatment


text: live

text: IGHM

text: Human

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

text: Healthy controls (Endemic)

text: Brazil: MS/PR

text: not applicable

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: male

text: Peripheral blood

text: Human sample from Homo sapiens

characteristic: title

text: No immunosupressive treatment


characteristic: External Id

characteristic: INSDC center name

text: live

text: IGHM

text: Human

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

text: Healthy controls (Endemic)

text: Brazil: MG

text: not applicable

text: Homo sapiens

text: female

text: Peripheral blood

text: Human sample from Homo sapiens

text: No immunosupressive treatment


characteristic: INSDC first public

text: live

text: IGHM

characteristic: Immunoglobulin Isotype

text: Human

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

text: Healthy controls (Endemic)

text: Brazil: MG

text: not applicable

text: Homo sapiens

text: male

text: Peripheral blood

text: Human sample from Homo sapiens

text: No immunosupressive treatment


text: live

text: IGHM

text: Human

characteristic: age

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

characteristic: disease

text: With active lesions/Non-Treated

text: Brazil: PR

text: not applicable

text: Homo sapiens

text: male

text: Peripheral blood

text: Human sample from Homo sapiens

text: No immunosupressive treatment


text: live

text: IGHM

text: Human

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

text: With active lesions/Non-Treated

text: Brazil: MG

text: not applicable

text: Homo sapiens

text: female

characteristic: sex

text: Peripheral blood

characteristic: tissue

text: Human sample from Homo sapiens

text: No immunosupressive treatment


characteristic: INSDC last update

text: live

text: IGHM

text: Human

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

text: With active lesions/Non-Treated

text: Brazil: MG/SP

text: not applicable

text: Homo sapiens

text: female

text: Peripheral blood

text: Human sample from Homo sapiens

text: No immunosupressive treatment

characteristic: treatment


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: IGHM

text: Human

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

text: With active lesions/Non-Treated

text: Brazil: SP

text: not applicable

text: Homo sapiens

text: female

text: Peripheral blood

text: Human sample from Homo sapiens

text: No immunosupressive treatment


text: live

text: IGHM

text: Human

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

text: With active lesions/Under Treatment

text: Brazil: MG

text: not applicable

text: Homo sapiens

text: female

text: Peripheral blood

text: Human sample from Homo sapiens

text: Immunosupressive treatment (Prednisone)


text: live

text: IGHM

text: Human

characteristic: SRA accession

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

text: With active lesions/Under Treatment

text: Brazil: MG/MS/SP

text: not applicable

characteristic: isolate

text: Homo sapiens

text: female

text: Peripheral blood

text: Human sample from Homo sapiens

text: Immunosupressive treatment (Prednisone)


text: live

text: IGHM

text: Human

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

text: With active lesions/Under Treatment

text: Brazil: MG/SP

text: not applicable

text: Homo sapiens

characteristic: organism

text: male

text: Peripheral blood

text: Human sample from Homo sapiens

characteristic: title

text: Immunosupressive treatment (Prednisone)


characteristic: External Id

characteristic: INSDC center name

text: live

text: IGHM

text: Human

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

text: With active lesions/Under Treatment

text: Brazil: GO

text: not applicable

text: Homo sapiens

text: female

text: Peripheral blood

text: Human sample from Homo sapiens

text: Immunosupressive treatment (Prednisone)


characteristic: INSDC first public

text: live

text: IGHM

characteristic: Immunoglobulin Isotype

text: Human

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

text: With active lesions/Under Treatment

text: Brazil: PR

text: not applicable

text: Homo sapiens

text: male

text: Peripheral blood

text: Human sample from Homo sapiens

text: Immunosupressive treatment (Prednisone)


text: live

text: IGHM

text: Human

characteristic: age

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

characteristic: disease

text: In remission/Non-treated

text: Brazil: MS

text: not applicable

text: Homo sapiens

text: female

text: Peripheral blood

text: Human sample from Homo sapiens

text: No immunosupressive treatment


text: live

text: IGHM

text: Human

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

text: In remission/Non-treated

text: Brazil: MS

text: not applicable

text: Homo sapiens

text: male

characteristic: sex

text: Peripheral blood

characteristic: tissue

text: Human sample from Homo sapiens

text: No immunosupressive treatment


characteristic: INSDC last update

text: live

text: IGHM

text: Human

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

text: In remission/Non-treated

text: Brazil: MG

text: not applicable

text: Homo sapiens

text: female

text: Peripheral blood

text: Human sample from Homo sapiens

text: No immunosupressive treatment

characteristic: treatment


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: IGHM

text: Human

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

text: In remission/Non-treated

text: Brazil: SP

text: not applicable

text: Homo sapiens

text: male

text: Peripheral blood

text: Human sample from Homo sapiens

text: No immunosupressive treatment


text: live

text: IGHG

text: Human

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

text: Healthy controls (Non-endemic)

text: Brazil: PR

text: not applicable

text: Homo sapiens

text: female

text: Peripheral blood

text: Human sample from Homo sapiens

text: No immunosupressive treatment


text: live

text: IGHG

text: Human

characteristic: SRA accession

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

text: Healthy controls (Endemic)

text: Brazil: MS

text: not applicable

characteristic: isolate

text: Homo sapiens

text: female

text: Peripheral blood

text: Human sample from Homo sapiens

text: No immunosupressive treatment


text: live

text: IGHG

text: Human

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

text: Healthy controls (Endemic)

text: Brazil: MS/PR

text: not applicable

text: Homo sapiens

characteristic: organism

text: male

text: Peripheral blood

text: Human sample from Homo sapiens

characteristic: title

text: No immunosupressive treatment


characteristic: External Id

characteristic: INSDC center name

text: live

text: IGHG

text: Human

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

text: Healthy controls (Endemic)

text: Brazil: MG

text: not applicable

text: Homo sapiens

text: female

text: Peripheral blood

text: Human sample from Homo sapiens

text: No immunosupressive treatment


characteristic: INSDC first public

text: live

text: IGHG

characteristic: Immunoglobulin Isotype

text: Human

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

text: Healthy controls (Endemic)

text: Brazil: MG

text: not applicable

text: Homo sapiens

text: male

text: Peripheral blood

text: Human sample from Homo sapiens

text: No immunosupressive treatment


text: live

text: IGHG

text: Human

characteristic: age

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

characteristic: disease

text: With active lesions/Non-Treated

text: Brazil: PR

text: not applicable

text: Homo sapiens

text: male

text: Peripheral blood

text: Human sample from Homo sapiens

text: No immunosupressive treatment


text: live

text: IGHG

text: Human

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

text: With active lesions/Non-Treated

text: Brazil: MG

text: not applicable

text: Homo sapiens

text: female

characteristic: sex

text: Peripheral blood

characteristic: tissue

text: Human sample from Homo sapiens

text: No immunosupressive treatment


characteristic: INSDC last update

text: live

text: IGHG

text: Human

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

text: With active lesions/Non-Treated

text: Brazil: MG/SP

text: not applicable

text: Homo sapiens

text: female

text: Peripheral blood

text: Human sample from Homo sapiens

text: No immunosupressive treatment

characteristic: treatment


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: IGHG

text: Human

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

text: With active lesions/Non-Treated

text: Brazil: SP

text: not applicable

text: Homo sapiens

text: female

text: Peripheral blood

text: Human sample from Homo sapiens

text: No immunosupressive treatment


text: live

text: IGHG

text: Human

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

text: With active lesions/Under Treatment

text: Brazil: MG

text: not applicable

text: Homo sapiens

text: female

text: Peripheral blood

text: Human sample from Homo sapiens

text: Immunosupressive treatment (Prednisone)


text: live

text: IGHG

text: Human

characteristic: SRA accession

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

text: With active lesions/Under Treatment

text: Brazil: MG/MS/SP

text: not applicable

characteristic: isolate

text: Homo sapiens

text: female

text: Peripheral blood

text: Human sample from Homo sapiens

text: Immunosupressive treatment (Prednisone)


text: live

text: IGHG

text: Human

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

text: With active lesions/Under Treatment

text: Brazil: MG/SP

text: not applicable

text: Homo sapiens

characteristic: organism

text: male

text: Peripheral blood

text: Human sample from Homo sapiens

characteristic: title

text: Immunosupressive treatment (Prednisone)


characteristic: External Id

characteristic: INSDC center name

text: live

text: IGHG

text: Human

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

text: With active lesions/Under Treatment

text: Brazil: GO

text: not applicable

text: Homo sapiens

text: female

text: Peripheral blood

text: Human sample from Homo sapiens

text: Immunosupressive treatment (Prednisone)


characteristic: INSDC first public

text: live

text: IGHG

characteristic: Immunoglobulin Isotype

text: Human

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

text: With active lesions/Under Treatment

text: Brazil: PR

text: not applicable

text: Homo sapiens

text: male

text: Peripheral blood

text: Human sample from Homo sapiens

text: Immunosupressive treatment (Prednisone)


text: live

text: IGHG

text: Human

characteristic: age

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

characteristic: disease

text: In remission/Non-treated

text: Brazil: MS

text: not applicable

text: Homo sapiens

text: female

text: Peripheral blood

text: Human sample from Homo sapiens

text: No immunosupressive treatment


text: live

text: IGHG

text: Human

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

text: In remission/Non-treated

text: Brazil: MS

text: not applicable

text: Homo sapiens

text: male

characteristic: sex

text: Peripheral blood

characteristic: tissue

text: Human sample from Homo sapiens

text: No immunosupressive treatment


characteristic: INSDC last update

text: live

text: IGHG

text: Human

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

text: In remission/Non-treated

text: Brazil: MG

text: not applicable

text: Homo sapiens

text: female

text: Peripheral blood

text: Human sample from Homo sapiens

text: No immunosupressive treatment

characteristic: treatment


characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: IGHG

text: Human

text: Peripheral blood mononuclear cells

text: Adult

text: Pemphigus foliaceus

text: In remission/Non-treated

text: Brazil: SP

text: not applicable

text: Homo sapiens

text: male

text: Peripheral blood

text: Human sample from Homo sapiens

text: No immunosupressive treatment


text: FDA CVM NARMS-North Carolina State University

text: live

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: animal

characteristic: SourceType

text: NCSU CVM Thakur Lab

text: USA:NC

text: missing

text: Chicken Liver

text: missing

text: Salmonella enterica

characteristic: strain

text: Pathogen: environmental/food/other sample from Salmonella enterica


text: live

text: Pathogen.env

characteristic: SRA accession

text: animal

text: NCSU CVM Thakur Lab

text: USA:NC

text: missing

text: Chicken Heart

text: missing

text: Salmonella enterica

characteristic: organism

characteristic: title


characteristic: External Id

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: Pathogen.env

text: animal

text: NCSU CVM Thakur Lab

text: USA:NC

text: missing

text: ground turkey

text: missing

text: Salmonella enterica


text: live

text: Pathogen.env

text: animal

text: NCSU CVM Thakur Lab

text: USA:NC

text: missing

text: Chicken Liver

text: missing

text: Campylobacter coli

text: Pathogen: environmental/food/other sample from Campylobacter coli


text: live

text: Pathogen.env

text: animal

text: NCSU CVM Thakur Lab

text: USA:NC

text: missing

text: Chicken Gizzard

text: missing

text: Campylobacter coli


text: live

text: Pathogen.env

text: animal

text: NCSU CVM Thakur Lab

text: USA:NC

text: missing

text: Chicken Heart

text: missing

text: Campylobacter jejuni

text: Pathogen: environmental/food/other sample from Campylobacter jejuni


text: Ginkgo Bioworks

text: live

text: SARS-CoV-2: wastewater surveillance

text: Pennsylvania Department of Health

text: School 001

text: 3:45:00 PM

text: 250 mL

text: membrane filtration with sample acidification

text: Wastewater from school campus

characteristic: description

text: Negative extraction control - di water or tween twenty buffer

text: LuminUltra Wastewater Extraction Kit

text: USA: Pennsylvania

text: wastewater

text: wastewater metagenome

text: Analysis of wastewater samples from manhole level collection on school campus

text: public health surveillance building-level

text: SARS-CoV-2 variant sequencing

text: Ginkgo Bioworks

text: SARS-CoV-2: wastewater surveillance sample from wastewater metagenome

text: Pepper mild mottle virus (PMMoV)

text: Kitajima, M., Sassi, H.P. & Torrey, J.R. Pepper mild mottle virus as a water quality indicator. npj Clean Water 1, 19 (2018). https://doi.org/10.1038/s41545-018-0019-5

text: copies/L

text: School team

text: raw wastewater

text: school

text: composite

text: PA

text: copies/L

text: N gene (N1)

text: yes

text: Falzone, L., Musso, N., Gattuso, G., Bongiorno, D., Palermo, C. I., Scalia, G., Libra, M., Stefani, S.. Sensitivity assessment of droplet digital PCR for SARS-CoV-2 detection. International Journal of Molecular Medicine 46, no. 3 (2020): 957-964. https://doi.org/10.3892/ijmm.2020.4673"


text: Ginkgo Bioworks

text: live

text: SARS-CoV-2: wastewater surveillance

text: Pennsylvania Department of Health

text: School 001

text: 2:25:00 PM

text: 250 mL

text: Wastewater from school campus

text: LuminUltra Wastewater Extraction Kit

text: USA: Pennsylvania

text: wastewater

text: wastewater metagenome

text: SARS-CoV-2 variant sequencing

text: Ginkgo Bioworks

text: Pepper mild mottle virus (PMMoV)

text: copies/L

text: School team

text: raw wastewater

text: school

text: composite

text: PA

text: copies/L

text: N gene (N1)

text: yes


text: Ginkgo Bioworks

text: live

text: SARS-CoV-2: wastewater surveillance

text: Pennsylvania Department of Health

text: School 001

text: 2:00:00 PM

text: 250 mL

text: Wastewater from school campus

text: LuminUltra Wastewater Extraction Kit

text: USA: Pennsylvania

text: wastewater

text: wastewater metagenome

text: SARS-CoV-2 variant sequencing

text: Ginkgo Bioworks

text: Pepper mild mottle virus (PMMoV)

text: copies/L

text: School team

text: raw wastewater

text: school

text: composite

text: PA

text: copies/L

text: N gene (N1)

text: yes


text: Ginkgo Bioworks

text: live

text: SARS-CoV-2: wastewater surveillance

text: Pennsylvania Department of Health

text: School 001

text: 2:15:00 PM

text: 250 mL

text: Wastewater from school campus

text: LuminUltra Wastewater Extraction Kit

text: USA: Pennsylvania

text: wastewater

text: wastewater metagenome

text: SARS-CoV-2 variant sequencing

text: Ginkgo Bioworks

text: Pepper mild mottle virus (PMMoV)

text: copies/L

text: School team

text: raw wastewater

text: school

text: composite

text: PA

text: copies/L

text: N gene (N1)

text: yes


text: Ginkgo Bioworks

text: live

text: SARS-CoV-2: wastewater surveillance

text: Pennsylvania Department of Health

text: School 001

text: 2:05:00 PM

text: 250 mL

text: Wastewater from school campus

text: LuminUltra Wastewater Extraction Kit

text: USA: Pennsylvania

text: wastewater

text: wastewater metagenome

text: SARS-CoV-2 variant sequencing

text: Ginkgo Bioworks

text: Pepper mild mottle virus (PMMoV)

text: copies/L

text: School team

text: raw wastewater

text: school

text: composite

text: PA

text: copies/L

text: N gene (N1)

text: yes


text: Ginkgo Bioworks

text: live

text: SARS-CoV-2: wastewater surveillance

text: Pennsylvania Department of Health

text: School 001

text: 2:10:00 PM

text: 250 mL

text: Wastewater from school campus

text: LuminUltra Wastewater Extraction Kit

text: USA: Pennsylvania

text: wastewater

text: wastewater metagenome

text: SARS-CoV-2 variant sequencing

text: Ginkgo Bioworks

text: Pepper mild mottle virus (PMMoV)

text: copies/L

text: School team

text: raw wastewater

text: school

text: composite

text: PA

text: copies/L

text: N gene (N1)

text: yes


text: Ginkgo Bioworks

text: live

text: SARS-CoV-2: wastewater surveillance

text: Pennsylvania Department of Health

text: School 001

text: 2:20:00 PM

text: 250 mL

text: Wastewater from school campus

text: LuminUltra Wastewater Extraction Kit

text: USA: Pennsylvania

text: wastewater

text: wastewater metagenome

text: SARS-CoV-2 variant sequencing

text: Ginkgo Bioworks

text: Pepper mild mottle virus (PMMoV)

text: copies/L

text: School team

text: raw wastewater

text: school

text: composite

text: PA

text: copies/L

text: N gene (N1)

text: yes


text: University of Iowa

text: live

text: SARS-CoV-2: clinical or host-associated

text: State Hygienic Laboratory at the University of Iowa

text: USA: Iowa

text: Homo sapiens

characteristic: host

characteristic: isolate

text: clinical

text: Baseline surveillance

text: SARS-CoV-2: clinical or host-associated sample from Severe acute respiratory syndrome coronavirus 2


text: University of Iowa

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: USA: Iowa

text: Homo sapiens

text: clinical

text: Severe acute respiratory syndrome coronavirus 2

text: Baseline surveillance


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 1

characteristic: Replicate

characteristic: Sample Day

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Prophylactic oats w/amox.


text: Brown University

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: Replicate 2

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Prophylactic oats w/amox.


text: Brown University

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Replicate 3

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Prophylactic oats w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 4

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Prophylactic oats


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 5

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Prophylactic oats


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 6

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Prophylactic oats


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 7

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Prophylactic oats


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 8

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 9

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 10

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 11

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 12

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 13

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 14

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 15

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 16

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 17

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 18

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 19

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 20

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 21

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 22

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 23

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Recovery oats w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 24

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Recovery oats w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 25

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Recovery oats w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 26

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Recovery oats


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 27

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Recovery oats


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 28

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Recovery oats


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 29

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Recovery oats


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 30

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Oats w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 31

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Oats w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 32

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Oats w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 33

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Oats w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 34

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Oats


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 35

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Oats


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 36

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Oats


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 37

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Prophylactic oats w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 38

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 39

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Recovery oats w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 40

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Oats


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 41

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 42

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 43

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 44

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 45

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 46

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 47

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 48

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 49

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Prophylactic oats w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 50

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Prophylactic oats w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 51

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Prophylactic oats w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 52

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Prophylactic oats w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 53

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Prophylactic oats


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 54

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Prophylactic oats


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 55

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Prophylactic oats


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 56

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Prophylactic oats


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 57

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Oats w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 58

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Oats w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 59

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Oats w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 60

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Oats w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 61

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Oats


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 62

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Oats


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 63

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Oats


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 64

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Oats


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 65

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 66

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 67

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 68

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 69

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Oats


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 70

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Oats


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 71

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Oats


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 72

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Oats


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 73

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 74

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 75

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 76

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 77

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 78

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 79

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 80

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 81

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Prophylactic oats w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 82

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Prophylactic oats w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 83

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Prophylactic oats w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 84

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Prophylactic oats w/amox.


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 85

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Prophylactic oats


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 86

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Prophylactic oats


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 87

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Prophylactic oats


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 88

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Prophylactic oats


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 89

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 90

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 91

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 92

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Dextrose


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 93

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Oats


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 94

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Oats


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 95

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Oats


text: Brown University

text: live

text: Metagenome or environmental

text: Replicate 96

text: USA: Rhode Island

text: Mus musculus

text: Cecum

text: 41.82 N 71.41 W

text: mouse gut metagenome

text: Always Oats


text: ZheJiang Academy of Agricultural Sciences

text: live

text: Metagenome or environmental

text: China:Zhejiang

text: soil

text: rhizosphere soil

text: 28.56 N 119.30 E

text: soil metagenome

characteristic: replication

text: Metagenome or environmental sample from soil metagenome


text: live

text: Metagenome or environmental

characteristic: SRA accession

text: China:Zhejiang

text: soil

text: bulk soil

text: 28.56 N 119.30 E

text: soil metagenome


De novo Genome H.austinensis

text: Rutgers University-Camden

text: live

text: Invertebrate

text: not provided

text: missing

text: North America

text: Helobdella austinensis

characteristic: organism

text: not provided

characteristic: tissue

text: Invertebrate sample from Helobdella austinensis


characteristic: External Id

text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: Chip Schooley, Natasha Martin, Cheryl Anderson, Angela Scioscia, Smruthi Karthikeyan, Greg Humphrey, Sawyer Farmer, Abigail Schnapper, Helena Tubb, Tommy Valles with SEARCH Alliance San Diego with the help of EXCITE Lab

text: not collected

text: USA: California, North America, San Diego

text: Homo sapiens

text: not collected

text: hcov-19 genomics

characteristic: title

text: not collected


text: SEARCH Alliance San Diego

characteristic: INSDC center name

characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

text: EXCITE Lab

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: USA: California, North America, Los Angeles

text: Homo sapiens

characteristic: host

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: USA: California, North America, Imperial

text: Homo sapiens

characteristic: isolate

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: Robert Tukey, Louise Laurent, Fatima Munos, Marva Seifert, Linda Salgin, Nicole Stadnick, Borsika Rabin, Paul Watson with SEARCH Alliance San Diego with the help of EXCITE Lab

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: USA: California, North America, Orange

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: David Pride, Sharon Reed, Chip Schooley, Angela Scioscia, Natasha Martin Cheryl Anderson, Sawyer Farmer, Abigail Schnapper, Helena Tubb, Tommy Valles with SEARCH Alliance San Diego with the help of EXCITE Lab

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: Fred Wu, Christine Mitchell with SEARCH Alliance San Diego with the help of EXCITE Lab

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: USA: California, North America, Riverside

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: J. Joelle Donofrio-Odmann, Brent Brainard with SEARCH Alliance San Diego with the help of EXCITE Lab

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: USA: California, North America, San Bernardino

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: EXCITE Lab

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: USA: California, North America, Orange

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: Fred Hutchinson Cancer Research Center

text: live

text: Microbe, viral or environmental

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: Escherichia coli

text: plasmid

text: NEB 10-beta

characteristic: strain

text: WT frameshifted barcode linkage sequencing


text: Fred Hutchinson Cancer Research Center

text: live

text: Microbe, viral or environmental

text: not applicable

text: wild type

characteristic: genotype

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: Saccharomyces cerevisiae

text: mrna

text: WT frameshifted library mRNA amplicon sequencing


text: Fred Hutchinson Cancer Research Center

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

text: not applicable

text: wild type

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: Saccharomyces cerevisiae

text: gdna

text: WT frameshifted library genomic DNA amplicon sequencing


text: SEARCH Alliance San Diego

text: live

characteristic: INSDC status

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Homo sapiens

text: not collected

text: Severe acute respiratory syndrome coronavirus 2

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission model

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: NCBI submission package

text: SEARCH Alliance San Diego with Michael Quigley, Ellen Stefanski, Ian Mchardy with the help of Scripps Medical Laboratory

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sydney Morgan, Marni Jacobs, Celestine Magallanes, Holly Valentine, Louise C. Laurent with SEARCH Alliance San Diego with the help of EXCITE Lab

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: USA: California, North America, Orange

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: SEARCH Alliance San Diego with Aaron Harding, Jacquelyn Berumen, Cathy Woerle, Liam McGinnis, Art Mendoza, Omid Bakhtar with the help of Sharp HealthCare Laboratory

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: USA: California, North America, Orange

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: Chip Schooley, Natasha Martin, Cheryl Anderson, Angela Scioscia, Smruthi Karthikeyan, Greg Humphrey, Sawyer Farmer, Abigail Schnapper, Helena Tubb, Tommy Valles with SEARCH Alliance San Diego with the help of EXCITE Lab

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Mexico: North America, Baja California,Tijuana

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: USA: California, North America, San Diego

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SARS-CoV-2/Human/USA/RI-CDC-2-7108464/2023

text: CDC DVD Genomics and DIscovery Team

text: live

characteristic: Isolate

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: Unknown

text: Unknown

text: female

text: nasopharyngeal swab

characteristic: lineage/clade name

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-7108452/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

characteristic: SRA accession

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: Unknown

text: Unknown

text: female

text: nasopharyngeal swab

characteristic: organism

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-7108444/2023

characteristic: External Id

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: Unknown

text: Unknown

text: male

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-7108438/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: Unknown

text: Unknown

text: male

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance

characteristic: title


text: SARS-CoV-2/Human/USA/RI-CDC-2-7108419/2023

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC center name

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: Unknown

text: Unknown

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-7108406/2023

text: CDC DVD Genomics and DIscovery Team

characteristic: INSDC first public

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: Unknown

text: Unknown

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-7108299/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

characteristic: host

text: Unknown

text: Unknown

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/RI-CDC-2-7108286/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: RI State Health Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Rhode Island

text: Homo sapiens

text: Unknown

text: Unknown

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/NV-CDC-2-7108468/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: NV-Southern Nevada Public Health Laboratory

text: Anterior nasal swab

text: Anterior nasal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Nevada

text: Homo sapiens

text: Unknown

text: Unknown

text: female

text: Anterior nasal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/NV-CDC-2-7108457/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Anterior nasal swab

text: Anterior nasal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Nevada

text: Homo sapiens

text: Unknown

text: Unknown

text: male

text: Anterior nasal swab

text: Severe acute respiratory syndrome coronavirus 2

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/NV-CDC-2-7108450/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Anterior nasal swab

text: Anterior nasal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Nevada

text: Homo sapiens

text: Unknown

text: Unknown

text: male

text: Anterior nasal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/NV-CDC-2-7108449/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Anterior nasal swab

text: Anterior nasal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Nevada

text: Homo sapiens

text: Unknown

text: Unknown

text: male

text: Anterior nasal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/NV-CDC-2-7108413/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Anterior nasal swab

text: Anterior nasal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Nevada

text: Homo sapiens

text: Unknown

text: Unknown

text: female

text: Anterior nasal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/NV-CDC-2-7108405/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Anterior nasal swab

text: Anterior nasal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Nevada

text: Homo sapiens

text: Unknown

text: Unknown

text: female

text: Anterior nasal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/NV-CDC-2-7108404/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Anterior nasal swab

text: Anterior nasal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Nevada

text: Homo sapiens

text: Unknown

text: Unknown

text: female

text: Anterior nasal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/NV-CDC-2-7108403/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Anterior nasal swab

text: Anterior nasal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Nevada

text: Homo sapiens

text: Unknown

text: Unknown

text: female

text: Anterior nasal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/NV-CDC-2-7108402/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Anterior nasal swab

text: Anterior nasal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Nevada

text: Homo sapiens

text: Unknown

text: Unknown

text: missing

text: Anterior nasal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/NV-CDC-2-7108284/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Anterior nasal swab

text: Anterior nasal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Nevada

text: Homo sapiens

text: Unknown

text: Unknown

text: female

text: Anterior nasal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/NM-CDC-2-7108443/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: "NM Dept. Health, Scientific Laboratory Division "

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: New Mexico

text: Homo sapiens

text: Unknown

text: Unknown

text: male

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/NC-CDC-2-7108408/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: NC State Laboratory of Public Health

text: Anterior nasal swab

text: Anterior nasal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: North Carolina

text: Homo sapiens

text: Unknown

text: Unknown

text: female

text: Anterior nasal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/MI-CDC-2-7108458/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: MI - Michigan Department of Health and Human Services - Bureau of Laboratories

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Michigan

text: Homo sapiens

text: Unknown

text: Unknown

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/MI-CDC-2-7108414/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Michigan

text: Homo sapiens

text: Unknown

text: Unknown

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/MI-CDC-2-7108283/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Michigan

text: Homo sapiens

text: Unknown

text: Unknown

text: male

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/DC-CDC-2-7108469/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: DC Public Health Lab/ Dept. of Forensic Sciences

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: District of Columbia

text: Homo sapiens

text: Unknown

text: Unknown

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/DC-CDC-2-7108463/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: District of Columbia

text: Homo sapiens

text: Unknown

text: Unknown

text: male

text: nasopharyngeal swab

text: Severe acute respiratory syndrome coronavirus 2

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/DC-CDC-2-7108451/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: District of Columbia

text: Homo sapiens

text: Unknown

text: Unknown

text: Not applicable

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/DC-CDC-2-7108439/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: District of Columbia

text: Homo sapiens

text: Unknown

text: Unknown

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/DC-CDC-2-7108436/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: District of Columbia

text: Homo sapiens

text: Unknown

text: Unknown

text: male

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/DC-CDC-2-7108429/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: District of Columbia

text: Homo sapiens

text: Unknown

text: Unknown

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/DC-CDC-2-7108427/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: District of Columbia

text: Homo sapiens

text: Unknown

text: Unknown

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/DC-CDC-2-7108425/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: District of Columbia

text: Homo sapiens

text: Unknown

text: Unknown

text: male

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/DC-CDC-2-7108423/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: District of Columbia

text: Homo sapiens

text: Unknown

text: Unknown

text: male

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/DC-CDC-2-7108421/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: District of Columbia

text: Homo sapiens

text: Unknown

text: Unknown

text: male

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/DC-CDC-2-7108300/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: District of Columbia

text: Homo sapiens

text: Unknown

text: Unknown

text: Not applicable

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/DC-CDC-2-7108295/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: District of Columbia

text: Homo sapiens

text: Unknown

text: Unknown

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/DC-CDC-2-7108294/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: District of Columbia

text: Homo sapiens

text: Unknown

text: Unknown

text: male

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/DC-CDC-2-7108287/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: District of Columbia

text: Homo sapiens

text: Unknown

text: Unknown

text: male

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/CO-CDC-2-7108465/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: "CO Dept. of Public Health and Environment, Lab Services Division"

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Colorado

text: Homo sapiens

text: Unknown

text: Unknown

text: male

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/CO-CDC-2-7108453/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Colorado

text: Homo sapiens

text: Unknown

text: Unknown

text: male

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/CO-CDC-2-7108441/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Colorado

text: Homo sapiens

text: Unknown

text: Unknown

text: male

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/CO-CDC-2-7108437/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Colorado

text: Homo sapiens

text: Unknown

text: Unknown

text: male

text: nasopharyngeal swab

text: Severe acute respiratory syndrome coronavirus 2

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/CO-CDC-2-7108428/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Colorado

text: Homo sapiens

text: Unknown

text: Unknown

text: male

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/CO-CDC-2-7108420/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Colorado

text: Homo sapiens

text: Unknown

text: Unknown

text: female

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SARS-CoV-2/Human/USA/CO-CDC-2-7108285/2023

text: CDC DVD Genomics and DIscovery Team

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasopharyngeal swab

text: Nasopharyngeal swab

text: N

text: Unknown

text: Swift Primers V2

text: USA: Colorado

text: Homo sapiens

text: Unknown

text: Unknown

text: male

text: nasopharyngeal swab

text: baseline surveillance (random sampling)

text: National SARS-CoV-2 Surveillance


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: David Pride, Sharon Reed, Chip Schooley, Angela Scioscia, Natasha Martin Cheryl Anderson, Sawyer Farmer, Abigail Schnapper, Helena Tubb, Tommy Valles with SEARCH Alliance San Diego with the help of EXCITE Lab

text: not collected

text: USA: California, North America, San Diego

text: Homo sapiens

characteristic: isolate

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

characteristic: INSDC last update

text: live

text: SARS-CoV-2: clinical or host-associated

text: Robert Tukey, Louise Laurent, Fatima Munos, Marva Seifert, Linda Salgin, Nicole Stadnick, Borsika Rabin, Paul Watson with SEARCH Alliance San Diego with the help of EXCITE Lab

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: Chip Schooley, Natasha Martin, Cheryl Anderson, Angela Scioscia, Smruthi Karthikeyan, Greg Humphrey, Sawyer Farmer, Abigail Schnapper, Helena Tubb, Tommy Valles with SEARCH Alliance San Diego with the help of EXCITE Lab

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: Fred Wu, Christine Mitchell with SEARCH Alliance San Diego with the help of EXCITE Lab

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: J. Joelle Donofrio-Odmann, Brent Brainard with SEARCH Alliance San Diego with the help of EXCITE Lab

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: USA: California, North America, Riverside

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Mexico: North America, Tijuana

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: USA: California, North America, Los Angeles

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: Sydney Morgan, Marni Jacobs, Celestine Magallanes, Holly Valentine, Louise C. Laurent with SEARCH Alliance San Diego with the help of EXCITE Lab

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: SEARCH Alliance San Diego with Aaron Harding, Jacquelyn Berumen, Cathy Woerle, Liam McGinnis, Art Mendoza, Omid Bakhtar with the help of Sharp HealthCare Laboratory

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: SEARCH Alliance San Diego with Ashleigh Murphy, Brett Austin with the help of San Diego County Public Health Laboratory

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasal swab

text: USA: California, North America, Imperial

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasal swab

text: USA: California, North America, Orange County

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: SEARCH Alliance San Diego with Jonathan Gonzalez Garcia, Jose Roman Chavez Mendez, Jose Horacio Reyna Verdugo, Martin Gonzalez Ibarra, Luis Alberto Rangel Gonzalez with the help of Genomica Lab Molecular, Mexico

text: Nasal swab

text: Mexico: North America, Baja California,Tijuana

text: Homo sapiens

text: nasal swab

text: Severe acute respiratory syndrome coronavirus 2

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasal swab

text: Mexico: North America, Baja California,Tecate

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasal swab

text: Mexico: North America, Sonora,San Luis Rio Colorado

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasal swab

text: Mexico: North America, Baja California,Rosarito

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: Nasal swab

text: Homo sapiens

text: nasal swab

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: SEARCH Alliance San Diego with Michael Quigley, Ellen Stefanski, Ian Mchardy with the help of Scripps Medical Laboratory

text: Oropharynx swab

text: USA: California, North America, San Diego

text: Homo sapiens

text: Oropharynx swab

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mid-turbinate swab

text: Homo sapiens

text: Mid-turbinate swab

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: Mid-turbinate swab

text: Homo sapiens

text: Mid-turbinate swab

text: hcov-19 genomics

text: not collected