text: Nanchang university

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Model organism or animal

text: CHINA:GUANG Jia

text: not provided

text: not provided

text: missing

text: not provided

text: not applicable

text: not applicable

text: not applicable

text: Longchangmao

text: not provided

text: not applicable

text: not provided

text: not provided

text: re-treatment

text: missing

characteristic: disease

text: missing

text: not applicable

characteristic: ecotype

text: not provided

characteristic: genotype

text: China:Beijing

text: not provided

text: missing

text: missing

characteristic: isolate

text: missing

text: missing

text: Mus musculus

text: not applicable

text: biological replicate 1

text: tissue sample

text: male

characteristic: sex

text: missing

text: missing

text: not applicable

text: not provided

text: lung

characteristic: tissue

text: reexposure group

text: exposure for recovery 2 weeks

characteristic: treatment


status: PUBLIC

characteristic: External Id

text: Nanchang university

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

tag: attribute

characteristic: age

text: CHINA:GUANG Jia

text: not provided

text: not provided

characteristic: breed

text: missing

text: not provided

text: not applicable

text: not applicable

text: not applicable

text: Longchangmao

text: not provided

text: not applicable

characteristic: cultivar

text: not provided

text: not provided

text: re-treatment

characteristic: description

text: missing

text: missing

text: not applicable

text: not provided

text: China:Beijing

text: not provided

text: missing

text: missing

text: missing

text: missing

text: Mus musculus

characteristic: organism

text: not applicable

characteristic: phenotype

text: biological replicate 2

characteristic: replicate

text: tissue sample

text: male

text: missing

text: missing

text: not applicable

characteristic: strain

text: not provided

text: lung

text: reexposure group

characteristic: title

text: exposure for recovery 2 weeks


text: Nanchang university

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Model organism or animal

text: CHINA:GUANG Jia

text: not provided

text: not provided

text: missing

text: not provided

text: not applicable

text: not applicable

text: not applicable

text: Longchangmao

text: not provided

text: not applicable

text: not provided

text: not provided

text: re-treatment

text: missing

characteristic: disease

text: missing

text: not applicable

characteristic: ecotype

text: not provided

characteristic: genotype

text: China:Beijing

text: not provided

text: missing

text: missing

characteristic: isolate

text: missing

text: missing

text: Mus musculus

text: not applicable

text: biological replicate 3

text: tissue sample

text: male

characteristic: sex

text: missing

text: missing

text: not applicable

text: not provided

text: lung

characteristic: tissue

text: reexposure group

text: exposure for recovery 2 weeks

characteristic: treatment


characteristic: External Id

text: Nanchang university

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

characteristic: age

text: CHINA:GUANG Jia

text: not provided

text: not provided

characteristic: breed

text: missing

text: not provided

text: not applicable

text: not applicable

text: not applicable

text: Longchangmao

text: not provided

text: not applicable

text: not provided

text: not provided

text: re-treatment

text: missing

text: missing

text: not applicable

text: not provided

text: China:Beijing

text: not provided

text: missing

text: missing

text: missing

text: missing

text: Mus musculus

text: not applicable

text: biological replicate 4

text: tissue sample

text: male

text: missing

text: missing

text: not applicable

text: not provided

text: lung

text: reexposure group

text: exposure for recovery 2 weeks


text: FDA CVM NARMS - Tennesse DOH

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: MLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

characteristic: host

text: Fluid

text: Pseudomonas aeruginosa

characteristic: organism

text: whole organism

text: not collected

characteristic: strain

text: Microbe sample from Pseudomonas aeruginosa

characteristic: title


text: turkey

characteristic: IFSAC+ Category

text: FDA

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:FL

text: ground turkey

text: missing

text: turkey (ground or minced):FOODON_00002714

characteristic: ontological term

text: Enterococcus faecalis

text: GenomeTrakr

text: food

characteristic: source type


characteristic: External Id

text: pork

text: FDA

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:FL

text: pork

text: missing

text: pork meat food product:FOODON_00001038

text: Enterococcus faecalis

text: GenomeTrakr

text: food


text: chicken

text: FDA

text: live

characteristic: INSDC status

text: Pathogen.env

characteristic: NCBI submission model

characteristic: NCBI submission package

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:FL

text: chicken

text: missing

text: Enterococcus faecalis

text: GenomeTrakr

text: food


text: chicken

text: FDA

text: live

text: Pathogen.env

characteristic: SRA accession

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:FL

text: chicken liver

text: missing

text: chicken liver:FOODON_00002705

text: Enterococcus faecalis

text: GenomeTrakr

text: food


text: pork

text: FDA

characteristic: INSDC first public

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:FL

text: pork chop

text: missing

text: pork chop food product:FOODON_00001049

text: Enterococcus faecalis

text: GenomeTrakr

text: food


text: chicken

text: FDA

characteristic: INSDC last update

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:FL

text: chicken heart

text: missing

text: chicken:FOODON_03411457| heart:UBERON_0000948

text: Enterococcus faecalis

text: GenomeTrakr

text: food


text: chicken

text: FDA

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:FL

text: chicken liver

text: missing

text: chicken liver:FOODON_00002705

text: Enterococcus faecium

text: GenomeTrakr

text: food


text: pork

text: FDA

text: live

text: Pathogen.env

text: environmental/food/other

text: FDA Contracted Laboratory

text: USA:FL

text: pork chop

text: missing

text: pork chop food product:FOODON_00001049

text: Enterococcus faecium

text: GenomeTrakr

text: food


Sauropus androgynus

text: Shandong Agricultural University

text: live

text: Plant

text: missing

characteristic: age

text: missing

characteristic: cultivar

text: missing

text: Wuzhishan

characteristic: ecotype

text: China: experimental field of College of Agriculture, Fujian Agriculture and Forestry University (26 04 N, 119 14 E)

text: missing

characteristic: isolate

text: Breynia androgyna

text: leaf

characteristic: tissue

text: Plant sample from Breynia androgyna


Sauropus androgynus rna-seq

text: Shandong Agricultural University

text: live

text: Plant

text: missing

text: Wuzhishan

text: Breynia androgyna

characteristic: organism

text: leaf

text: Plant sample from Breynia androgyna

characteristic: title


Sauropus androgynus hi-c

text: Shandong Agricultural University

text: live

text: Plant

text: missing

text: Wuzhishan

text: Breynia androgyna

text: leaf

text: Plant sample from Breynia androgyna


text: Academia Sinica

text: live

text: MIGS.ba

text: MIGS Cultured Bacterial/Archaeal sample from Thermosynechococcus sp. PP45

characteristic: description

text: hot spring

text: hot spring

text: water

text: Taiwan: Datong Township, Yilan County

text: 24.61706 N 121.52182 E

text: Thermosynechococcus sp. PP45

characteristic: strain


characteristic: External Id

text: Academia Sinica

characteristic: INSDC center name

text: live

text: MIGS.ba

text: MIGS Cultured Bacterial/Archaeal sample from Thermosynechococcus sp. HY596

text: hot spring

text: hot spring

text: water

text: Taiwan: Yanping Township, Taitung County

text: 22.89203 N 121.07213 E

text: Thermosynechococcus sp. HY596


Sauropus androgynus PacBio

text: Shandong Agricultural University

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Plant

text: missing

text: Wuzhishan

text: Breynia androgyna

text: leaf

text: Plant sample from Breynia androgyna


text: Veterinary Faculty

text: live

text: Viral

characteristic: NCBI submission model

characteristic: NCBI submission package

text: Slovenia

text: chamois

characteristic: host

text: faeces

text: physical

text: Rotavirus A

text: Viral sample from Rotavirus A


text: Veterinary Faculty

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Viral

characteristic: SRA accession

text: Slovenia

text: red deer

text: faeces

text: physical

text: Rotavirus A

text: Viral sample from Rotavirus A


text: Veterinary Faculty

text: live

text: Viral

text: Slovenia

text: roe deer

text: faeces

text: physical

text: Rotavirus A

text: Viral sample from Rotavirus A


text: Shenzhen University

text: live

text: Human

text: biological replicate 1

characteristic: Replicate

characteristic: age

text: Huangweiren Lab

text: not collected

characteristic: collection date

text: not collected

text: not collected

characteristic: geographic location

text: G Cannon

text: Homo sapiens

text: male

characteristic: sex

text: Urinary bladder

text: Human sample from Homo sapiens

text: Ctrl

characteristic: treatment


text: Shenzhen University

text: live

text: Human

text: biological replicate 2

text: Huangweiren Lab

text: not collected

text: not collected

text: not collected

text: G Cannon

characteristic: isolate

text: Homo sapiens

characteristic: organism

text: male

text: Urinary bladder

characteristic: tissue

text: Human sample from Homo sapiens

characteristic: title

text: Ctrl


characteristic: External Id

text: Shenzhen University

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Human

text: biological replicate 1

text: Huangweiren Lab

text: not collected

text: not collected

text: not collected

text: G Cannon

text: Homo sapiens

text: male

text: Urinary bladder

text: Human sample from Homo sapiens

text: GEM resistance


text: Shenzhen University

characteristic: INSDC first public

text: live

text: Human

characteristic: NCBI submission model

characteristic: NCBI submission package

text: biological replicate 2

text: Huangweiren Lab

text: not collected

text: not collected

text: not collected

text: G Cannon

text: Homo sapiens

text: male

text: Urinary bladder

text: Human sample from Homo sapiens

text: GEM resistance


text: Shenzhen University

characteristic: INSDC last update

text: live

text: Human

text: biological replicate 1

characteristic: Replicate

characteristic: SRA accession

text: Huangweiren Lab

text: not collected

text: not collected

text: not collected

text: G Cannon

text: Homo sapiens

text: female

text: Urinary bladder

text: Human sample from Homo sapiens

text: Ctrl


text: Shenzhen University

text: live

text: Human

text: biological replicate 2

characteristic: age

text: Huangweiren Lab

text: not collected

characteristic: collection date

text: not collected

text: not collected

characteristic: geographic location

text: G Cannon

text: Homo sapiens

text: female

text: Urinary bladder

text: Human sample from Homo sapiens

text: Ctrl


text: Shenzhen University

text: live

text: Human

text: biological replicate 1

text: Huangweiren Lab

text: not collected

text: not collected

text: not collected

text: G Cannon

characteristic: isolate

text: Homo sapiens

text: female

characteristic: sex

text: Urinary bladder

text: Human sample from Homo sapiens

text: DDP resistance

characteristic: treatment


text: Shenzhen University

text: live

text: Human

text: biological replicate 2

text: Huangweiren Lab

text: not collected

text: not collected

text: not collected

text: G Cannon

text: Homo sapiens

characteristic: organism

text: female

text: Urinary bladder

characteristic: tissue

text: Human sample from Homo sapiens

characteristic: title

text: DDP resistance


characteristic: External Id

text: University of Calgary

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Generic

text: male

characteristic: Sex

text: missing

characteristic: genotype

text: missing

text: Mus musculus

text: Dorsal Root Ganglia

text: Dorsal Root Ganglia

text: TRPV1cre-GOF Male Biol rep 2

text: Naive


text: University of Calgary

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: male

text: missing

text: missing

text: Mus musculus

text: Dorsal Root Ganglia

text: Dorsal Root Ganglia

text: TRPV1cre-GOF Male Biol rep 1

text: Naive


text: University of Calgary

text: live

text: Generic

characteristic: SRA accession

text: male

text: missing

text: WT

text: missing

text: Mus musculus

text: Dorsal Root Ganglia

text: Dorsal Root Ganglia

text: GOF Male Biol rep 2

text: Naive


text: University of Calgary

text: live

text: Generic

text: male

text: missing

text: WT

text: missing

text: Mus musculus

text: Dorsal Root Ganglia

text: Dorsal Root Ganglia

text: GOF Male Biol rep 1

text: Naive


text: University of Calgary

text: live

text: Generic

text: female

text: missing

text: missing

text: Mus musculus

text: Dorsal Root Ganglia

text: Dorsal Root Ganglia

text: TRPV1cre-GOF Female Biol rep 2

text: Naive


text: University of Calgary

text: live

text: Generic

text: female

text: missing

text: missing

text: Mus musculus

text: Dorsal Root Ganglia

text: Dorsal Root Ganglia

text: TRPV1cre-GOF Female Biol rep 1

text: Naive


text: University of Calgary

text: live

text: Generic

text: female

text: missing

text: WT

text: missing

text: Mus musculus

text: Dorsal Root Ganglia

text: Dorsal Root Ganglia

text: GOF Female Biol rep 2

text: Naive


text: University of Calgary

text: live

text: Generic

text: female

text: missing

text: WT

text: missing

text: Mus musculus

text: Dorsal Root Ganglia

text: Dorsal Root Ganglia

text: GOF Female Biol rep 1

text: Naive


Met kinase

text: University of California, San Francisco

text: live

text: Human

characteristic: age

text: Fraser lab, University of California, San Francisco, CA, USA

text: USA: San Francisco, CA

characteristic: isolate

text: Homo sapiens

text: Cell culture

text: Human sample from Homo sapiens


text: University of California Santa Cruz

text: live

text: MIMS.me

text: 1 cm

characteristic: depth

characteristic: description

text: 200 m

characteristic: elev

text: agricultural

text: grazed pastureland

text: soil

text: USA: California, Paicines

text: 36.703889 N 121.283889 W

text: soil metagenome


text: University of California Santa Cruz

text: live

text: MIMS.me

text: lab control

text: extraction blank 1

text: blank

text: soil metagenome

characteristic: organism

characteristic: title


characteristic: External Id

text: University of California Santa Cruz

characteristic: INSDC center name

text: live

text: MIMS.me

text: lab control

text: extraction blank 2

text: blank

text: soil metagenome


text: University of California Santa Cruz

characteristic: INSDC secondary accession

text: live

text: MIMS.me

text: lab control

text: extraction blank 3

text: blank

text: soil metagenome


text: University of California Santa Cruz

text: live

text: MIMS.me

text: lab control

text: extraction blank 4

text: blank

text: soil metagenome


text: University of California Santa Cruz

text: live

text: MIMS.me

text: lab control

text: extraction blank 5

text: blank

text: soil metagenome


text: University of California Santa Cruz

text: live

text: MIMS.me

text: lab control

text: PCR blank 1

text: blank

text: soil metagenome


text: University of California Santa Cruz

text: live

text: MIMS.me

text: 1 cm

text: 200 m

text: agricultural

text: grazed pastureland

text: dung

text: USA: California, Paicines

text: 36.703889 N 121.283889 W

text: soil metagenome


text: University of California Santa Cruz

text: live

text: MIMS.me

text: lab control

text: extraction blank 6

text: blank

text: soil metagenome


text: University of California Santa Cruz

text: live

text: MIMS.me

text: lab control

text: extraction blank 7

text: blank

text: soil metagenome


text: University of California Santa Cruz

text: live

text: MIMS.me

text: lab control

text: extraction blank 8

text: blank

text: soil metagenome


text: University of California Santa Cruz

text: live

text: MIMS.me

text: lab control

text: PCR blank 2

text: blank

text: soil metagenome


text: University of California Santa Cruz

text: live

text: MIMS.me

text: lab control

text: PCR blank 3

text: blank

text: soil metagenome


ZhongShan

text: Guangdong Academy of Agricultural Sciences

text: live

text: Plant

text: mature

text: China: Zhong Shan

text: ZhongShan

text: Breynia spatulifolia

text: leaf

characteristic: tissue

text: Plant sample from Sauropus spatulifolius


Miniopterus aelleni FMNH173067

characteristic: Catalog Number

text: The Field Museum

characteristic: INSDC first public

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Madagascar

text: 12.9183 S 49.1267 E

text: Miniopterus aelleni

text: not collected

characteristic: sex

text: not collected

characteristic: strain

text: muscle

text: Model organism or animal sample from Miniopterus aelleni


Miniopterus aelleni FMNH209243

text: The Field Museum

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

text: not collected

text: not collected

text: not collected

text: Madagascar

text: 18.03664 S 44.49439 E

text: Miniopterus aelleni

text: not collected

text: not collected

text: muscle


Miniopterus africanus FMNH28765

text: The Field Museum

text: live

text: Model organism or animal

characteristic: SRA accession

text: not collected

characteristic: age

text: not collected

text: not collected

text: Ethiopia

text: 9.7 N 38.5 E

text: Miniopterus africanus

text: not collected

text: not collected

text: muscle

text: Model organism or animal sample from Miniopterus africanus


Miniopterus africanus FMNH28767

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Ethiopia

text: 9.7 N 38.5 E

text: Miniopterus africanus

text: not collected

text: not collected

text: muscle


Miniopterus africanus FMNH216800

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Kenya

text: 1.36667 S 36.5 E

text: Miniopterus africanus

text: not collected

text: not collected

text: muscle


Miniopterus africanus FMNH225923

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Kenya

text: 0.4301 S 36.17368 E

text: Miniopterus africanus

text: not collected

text: not collected

text: muscle


Miniopterus ambohitrensis FMNH202450

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Madagascar

text: 12.52703 S 49.17197 E

text: Miniopterus ambohitrensis

text: not collected

text: not collected

text: muscle

text: Model organism or animal sample from Miniopterus ambohitrensis


Miniopterus ambohitrensis FMNH202452

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Madagascar

text: 12.52703 S 49.17197 E

text: Miniopterus ambohitrensis

text: not collected

text: not collected

text: muscle


Miniopterus brachytragos FMNH175856

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Madagascar

text: 16.47 S 45.3483 E

text: Miniopterus brachytragos

text: not collected

text: not collected

text: muscle

text: Model organism or animal sample from Miniopterus brachytragos


Miniopterus brachytragos FMNH188651

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Madagascar

text: 13.44725 S 48.3411 E

text: Miniopterus brachytragos

text: not collected

text: not collected

text: muscle


Miniopterus villiersi sp. FMNH42589

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Cameroon

text: 4.1500001 N 9.2333298 E

text: Miniopterus villiersi

text: not collected

text: not collected

text: muscle

text: Model organism or animal sample from Miniopterus villiersi


Miniopterus villiersi sp. FMNH144314

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Uganda

text: 0.3666 N 30 E

text: Miniopterus villiersi

text: not collected

text: not collected

text: muscle


Miniopterus egeri FMNH202519

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Madagascar

text: 15.428233 S 49.845283 E

text: Miniopterus egeri

text: not collected

text: not collected

text: muscle

text: Model organism or animal sample from Miniopterus egeri


Miniopterus egeri FMNH202522

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Madagascar

text: 15.634217 S 49.968567 E

text: Miniopterus egeri

text: not collected

text: not collected

text: muscle


Miniopterus fraterculus DM8358

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: South Africa

text: 34.036643 S 23.049704 E

text: Miniopterus fraterculus

text: not collected

text: not collected

text: muscle

text: Model organism or animal sample from Miniopterus fraterculus


Miniopterus fraterculus DM8359

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: South Africa

text: 34.036643 S 23.049704 E

text: Miniopterus fraterculus

text: not collected

text: not collected

text: muscle


Miniopterus fraterculus FMNH214878

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Mozambique

text: 18.43481 S 34.05167 E

text: Miniopterus fraterculus

text: not collected

text: not collected

text: muscle


Miniopterus fraterculus FMNH221090

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Kenya

text: 2.52863 S 37.85336 E

text: Miniopterus fraterculus

text: not collected

text: not collected

text: muscle


Miniopterus fraterculus FMNH232125

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Uganda

text: 3.81083 N 34.02931 E

text: Miniopterus fraterculus

text: not collected

text: not collected

text: muscle


Miniopterus gleni FMNH202534

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Madagascar

text: 15.61 S 49.97917 E

text: Miniopterus gleni

text: not collected

text: not collected

text: muscle

text: Model organism or animal sample from Miniopterus gleni


Miniopterus griffithsi FMNH184214

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Madagascar

text: 24.6502 S 43.963283 E

text: Miniopterus griffithsi

text: not collected

text: not collected

text: muscle

text: Model organism or animal sample from Miniopterus griffithsi


Miniopterus griffithsi FMNH209274

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Madagascar

text: 24.70236 S 43.96372 E

text: Miniopterus griffithsi

text: not collected

text: not collected

text: muscle


Miniopterus griveaudi FMNH194408

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Comoros

text: 12.206944 S 44.5005555 E

text: Miniopterus griveaudi

text: not collected

text: not collected

text: muscle

text: Model organism or animal sample from Miniopterus griveaudi


Miniopterus griveaudi FMNH194409

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Comoros

text: 12.206944 S 44.5005555 E

text: Miniopterus griveaudi

text: not collected

text: not collected

text: muscle


Miniopterus inflatus FMNH215674

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Kenya

text: 1.03558 N 34.75312 E

text: Miniopterus inflatus

text: not collected

text: not collected

text: muscle

text: Model organism or animal sample from Miniopterus inflatus


Miniopterus inflatus FMNH215678

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Kenya

text: 0.21838 N 34.89655 E

text: Miniopterus inflatus

text: not collected

text: not collected

text: muscle


Miniopterus inflatus ROM68009

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Cameroon

text: 4.13 N 9.217 E

text: Miniopterus inflatus

text: not collected

text: not collected

text: muscle


Miniopterus inflatus ROM68939

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Cameroon

text: 4.15 N 9.217 E

text: Miniopterus inflatus

text: not collected

text: not collected

text: muscle


Miniopterus magnater LSUMZ5175

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Malaysia

text: missing

text: Miniopterus magnater

text: not collected

text: not collected

text: muscle

text: Model organism or animal sample from Miniopterus magnater


Miniopterus mahafaliensis FMNH173197

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Madagascar

text: 24.05 S 43.75 E

text: Miniopterus mahafaliensis

text: not collected

text: not collected

text: muscle

text: Model organism or animal sample from Miniopterus mahafaliensis


Miniopterus mahafaliensis FMNH175991

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Madagascar

text: 22.3167 S 45.2933 E

text: Miniopterus mahafaliensis

text: not collected

text: not collected

text: muscle


Miniopterus majori FMNH209172

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Madagascar

text: 20.182983 S 47.385517 E

text: Miniopterus majori

text: not collected

text: not collected

text: muscle

text: Model organism or animal sample from Miniopterus majori


Miniopterus majori FMNH209177

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Madagascar

text: 20.182983 S 47.385517 E

text: Miniopterus majori

text: not collected

text: not collected

text: muscle


Miniopterus manavi FMNH187662

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Madagascar

text: 21.23747 S 47.39778 E

text: Miniopterus manavi

text: not collected

text: not collected

text: muscle

text: Model organism or animal sample from Miniopterus manavi


Miniopterus manavi FMNH194074

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Madagascar

text: 20.182983 S 47.385517 E

text: Miniopterus manavi

text: not collected

text: not collected

text: muscle


Miniopterus minor FMNH198003

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Tanzania

text: 5.0727 S 39.048481 E

text: Miniopterus minor

text: not collected

text: not collected

text: muscle

text: Model organism or animal sample from Miniopterus minor


Miniopterus minor FMNH220550

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Kenya

text: 4.08171 S 39.48295 E

text: Miniopterus minor

text: not collected

text: not collected

text: muscle


Miniopterus mossambicus FMNH213651

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Mozambique

text: 15.10306 S 39.21748 E

text: Miniopterus mossambicus

text: not collected

text: not collected

text: muscle

text: Model organism or animal sample from Miniopterus mossambicus


Miniopterus mossambicus FMNH213652

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Mozambique

text: 15.10306 S 39.21748 E

text: Miniopterus mossambicus

text: not collected

text: not collected

text: muscle


Miniopterus mossambicus FMNH219282

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Tanzania

text: 7.70714 S 34.0305 E

text: Miniopterus mossambicus

text: not collected

text: not collected

text: muscle


Miniopterus natalensis DM8362

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: South Africa

text: 29.85 S 30.7166 E

text: Miniopterus natalensis

text: not collected

text: not collected

text: muscle

text: Model organism or animal sample from Miniopterus natalensis


Miniopterus natalensis DM13312

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: South Africa

text: 29.85 S 30.7166 E

text: Miniopterus natalensis

text: not collected

text: not collected

text: muscle


Miniopterus natalensis DM13313

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: South Africa

text: 29.85 S 30.7166 E

text: Miniopterus natalensis

text: not collected

text: not collected

text: muscle


Miniopterus natalensis FMNH195655

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: South Africa

text: 26.879839 S 27.245439 E

text: Miniopterus natalensis

text: not collected

text: not collected

text: muscle


Miniopterus natalensis FMNH195657

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: South Africa

text: 26.879839 S 27.245439 E

text: Miniopterus natalensis

text: not collected

text: not collected

text: muscle


Miniopterus natalensis FMNH195659

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: South Africa

text: 26.879839 S 27.245439 E

text: Miniopterus natalensis

text: not collected

text: not collected

text: muscle


Miniopterus paululus FMNH205660

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Philippines

text: 14.03275 N 121.68542 E

text: Miniopterus paululus

text: not collected

text: not collected

text: muscle

text: Model organism or animal sample from Miniopterus paululus


Miniopterus petersoni FMNH194136

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Madagascar

text: 24.98905 S 46.922833 E

text: Miniopterus petersoni

text: not collected

text: not collected

text: muscle

text: Model organism or animal sample from Miniopterus petersoni


Miniopterus petersoni FMNH209186

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Madagascar

text: 24.98905 S 46.922833 E

text: Miniopterus petersoni

text: not collected

text: not collected

text: muscle


Miniopterus sororculus FMNH177257

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Madagascar

text: 20.572017 S 46.80885 E

text: Miniopterus sororculus

text: not collected

text: not collected

text: muscle

text: Model organism or animal sample from Miniopterus sororculus


Miniopterus sororculus FMNH177259

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Madagascar

text: 20.572017 S 46.80885 E

text: Miniopterus sororculus

text: not collected

text: not collected

text: muscle


Miniopterus sp. A FMNH177219

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Mozambique

text: 15.4135 S 37.07433 E

text: Miniopterus sp. A TD-2023

text: not collected

text: not collected

text: muscle

text: Model organism or animal sample from Miniopterus sp. A TD-2023


Miniopterus sp. A FMNH205313

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Tanzania

text: 9.574771 S 33.51059 E

text: Miniopterus sp. A TD-2023

text: not collected

text: not collected

text: muscle


Miniopterus sp. A FMNH234765

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Kenya

text: 0.25157 S 36.05477 E

text: Miniopterus sp. A TD-2023

text: not collected

text: not collected

text: muscle


Miniopterus sp. B FMNH220580

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Kenya

text: 4.08171 S 39.48295 E

text: Miniopterus sp. B TD-2023

text: not collected

text: not collected

text: muscle

text: Model organism or animal sample from Miniopterus sp. B TD-2023


Miniopterus sp. B FMNH220593

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Kenya

text: 3.3232 S 40.04156 E

text: Miniopterus sp. B TD-2023

text: not collected

text: not collected

text: muscle


Miniopterus sp. C FMNH192113

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Malawi

text: 13.3797 S 34.0025 E

text: Miniopterus sp. C TD-2023

text: not collected

text: not collected

text: muscle

text: Model organism or animal sample from Miniopterus sp. C TD-2023


Miniopterus sp. D FMNH216162

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Kenya

text: 3.61392 S 38.73703 E

text: Miniopterus sp. D TD-2023

text: not collected

text: not collected

text: muscle

text: Model organism or animal sample from Miniopterus sp. D TD-2023


Miniopterus sp. D FMNH225920

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Kenya

text: 0.4301 S 36.17368 E

text: Miniopterus sp. D TD-2023

text: not collected

text: not collected

text: muscle


Miniopterus sp. D NMK184508

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Kenya

text: 0.22832 N 37.11297 E

text: Miniopterus sp. D TD-2023

text: not collected

text: not collected

text: muscle


Miniopterus sp. E FMNH219481

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Democratic Republic of the Congo

text: 5.29042 S 14.87053 E

text: Miniopterus sp. E TD-2023

text: not collected

text: not collected

text: muscle

text: Model organism or animal sample from Miniopterus sp. E TD-2023


Miniopterus sp. E FMNH219482

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Democratic Republic of the Congo

text: 5.29042 S 14.87053 E

text: Miniopterus sp. E TD-2023

text: not collected

text: not collected

text: muscle


Miniopterus sp. E FMNH219483

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Democratic Republic of the Congo

text: 5.29042 S 14.87053 E

text: Miniopterus sp. E TD-2023

text: not collected

text: not collected

text: muscle


Miniopterus tristis TTU36280

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Papua New Guinea

text: 9.4632235 S 147.6309052 E

text: Miniopterus tristis

text: not collected

text: not collected

text: muscle

text: Model organism or animal sample from Miniopterus tristis


Myotis tricolor FMNH225830

text: The Field Museum

text: live

text: Model organism or animal

text: not collected

text: not collected

text: not collected

text: Kenya

text: 0.2516 S 36.0548 E

text: Myotis tricolor

text: not collected

text: not collected

text: muscle

text: Model organism or animal sample from Myotis tricolor


-FR Mid

text: Royal Holloway University of London

text: live

text: Plant

text: 45 days

text: Marian

characteristic: cultivar

text: United Kingdom

text: Ocimum basilicum

text: Leaf

text: Plant sample from Ocimum basilicum

text: -FR Mid

characteristic: treatment


+FR Mid

text: Royal Holloway University of London

text: live

text: Plant

text: 45 days

text: Marian

text: United Kingdom

text: Ocimum basilicum

characteristic: organism

text: Leaf

text: Plant sample from Ocimum basilicum

characteristic: title

text: +FR Mid


-FR Post

characteristic: External Id

text: Royal Holloway University of London

characteristic: INSDC center name

text: live

text: Plant

text: 45 days

text: Marian

text: United Kingdom

text: Ocimum basilicum

text: Leaf

text: Plant sample from Ocimum basilicum

text: -FR Post


+FR Post

text: Royal Holloway University of London

characteristic: INSDC secondary accession

text: live

text: Plant

text: 45 days

text: Marian

text: United Kingdom

text: Ocimum basilicum

text: Leaf

characteristic: tissue

text: Plant sample from Ocimum basilicum

text: +FR Post


text: Tsinghua University

characteristic: INSDC first public

text: live

text: Metagenome or environmental

text: China: Hainan Luhuitou peninsula coastal areas

text: Acropora digitifera

characteristic: host

text: coast

text: 18.20 N 109.46 E

text: coral metagenome

text: replicate = biological replicate 1

characteristic: replicate

text: Metagenome or environmental sample from coral metagenome


text: Tsinghua University

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: Acropora digitifera

text: coast

text: 18.20 N 109.46 E

text: coral metagenome

text: replicate = biological replicate 2


text: Tsinghua University

text: live

characteristic: INSDC status

text: Metagenome or environmental

text: Acropora digitifera

text: coast

text: 18.20 N 109.46 E

text: coral metagenome

text: replicate = biological replicate 3


text: Tsinghua University

text: live

text: Metagenome or environmental

characteristic: NCBI submission model

text: Acropora digitifera

text: coast

text: 18.20 N 109.46 E

text: coral metagenome

text: replicate = biological replicate 4


text: Tsinghua University

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: Acropora digitifera

text: coast

text: 18.20 N 109.46 E

text: coral metagenome

text: replicate = biological replicate 5


text: Tsinghua University

text: live

text: Metagenome or environmental

text: Acropora digitifera

text: coast

text: 18.20 N 109.46 E

text: coral metagenome

text: replicate = biological replicate 6


text: Tsinghua University

text: live

text: Metagenome or environmental

text: Galaxea fascicularis

text: coast

text: 18.20 N 109.46 E

text: coral metagenome

text: replicate = biological replicate 7


text: Tsinghua University

text: live

text: Metagenome or environmental

text: Galaxea fascicularis

text: coast

text: 18.20 N 109.46 E

text: coral metagenome

text: replicate = biological replicate 8


text: Tsinghua University

text: live

text: Metagenome or environmental

text: Galaxea fascicularis

text: coast

text: 18.20 N 109.46 E

text: coral metagenome

text: replicate = biological replicate 9


text: Tsinghua University

text: live

text: Metagenome or environmental

text: Galaxea fascicularis

text: coast

text: 18.20 N 109.46 E

text: coral metagenome

text: replicate = biological replicate 10


text: Tsinghua University

text: live

text: Metagenome or environmental

text: Galaxea fascicularis

text: coast

text: 18.20 N 109.46 E

text: coral metagenome

text: replicate = biological replicate 11


text: Tsinghua University

text: live

text: Metagenome or environmental

text: Galaxea fascicularis

text: coast

text: 18.20 N 109.46 E

text: coral metagenome

text: replicate = biological replicate 12


text: Tsinghua University

text: live

text: Metagenome or environmental

text: Porites pukoensis

text: coast

text: 18.20 N 109.46 E

text: coral metagenome

text: replicate = biological replicate 13


text: Tsinghua University

text: live

text: Metagenome or environmental

text: Porites pukoensis

text: coast

text: 18.20 N 109.46 E

text: coral metagenome

text: replicate = biological replicate 14


text: Tsinghua University

text: live

text: Metagenome or environmental

text: Porites pukoensis

text: coast

text: 18.20 N 109.46 E

text: coral metagenome

text: replicate = biological replicate 15


text: Tsinghua University

text: live

text: Metagenome or environmental

text: Porites pukoensis

text: coast

text: 18.20 N 109.46 E

text: coral metagenome

text: replicate = biological replicate 16


text: Tsinghua University

text: live

text: Metagenome or environmental

text: Porites pukoensis

text: coast

text: 18.20 N 109.46 E

text: coral metagenome

text: replicate = biological replicate 17


text: Tsinghua University

text: live

text: Metagenome or environmental

text: Porites pukoensis

text: coast

text: 18.20 N 109.46 E

text: coral metagenome

text: replicate = biological replicate 18


text: Rhode Island Department of Health FDA Wastewater submission group

text: live

text: SARS-CoV-2: wastewater surveillance

characteristic: SRA accession

text: Rhode Island Department of Health

text: ceres nanotrap

characteristic: description

text: qiagen qiaamp viral rna mini kit

text: USA: Rhode Island

text: wastewater

text: wastewater metagenome

text: GenomeTrakr; LFFM ww project

text: public health surveillance community-level

text: detection of target by ddPCR

text: Rhode Island Department of Health

text: SARS-CoV-2: wastewater surveillance sample from Wastewater metagenome

text: pepper mild mottle virus

text: Not Provided

text: Not Provided

text: raw wastewater

text: Restricted Access

text: composite

text: copies/uL

text: N gene (N1)

text: yes

text: GT-Digital SARS-CoV-2 Wastewater Surveillance Assay For QIAcuity dPCR


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: Robert Tukey, Louise Laurent, Fatima Munos, Marva Seifert, Linda Salgin, Nicole Stadnick, Borsika Rabin, Paul Watson with SEARCH Alliance San Diego with the help of EXCITE Lab

text: not collected

text: USA: California, North America, San Diego

text: Homo sapiens

characteristic: isolate

text: not collected

text: Severe acute respiratory syndrome coronavirus 2

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: Chip Schooley, Natasha Martin, Cheryl Anderson, Angela Scioscia, Smruthi Karthikeyan, Greg Humphrey, Sawyer Farmer, Abigail Schnapper, Helena Tubb, Tommy Valles with SEARCH Alliance San Diego with the help of EXCITE Lab

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: David Pride, Sharon Reed, Chip Schooley, Angela Scioscia, Natasha Martin Cheryl Anderson, Sawyer Farmer, Abigail Schnapper, Helena Tubb, Tommy Valles with SEARCH Alliance San Diego with the help of EXCITE Lab

text: not collected

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: SEARCH Alliance San Diego

text: live

text: SARS-CoV-2: clinical or host-associated

text: not collected

text: USA: California, North America, Los Angeles

text: Homo sapiens

text: not collected

text: hcov-19 genomics

text: not collected


text: IFREMER

text: live

text: Metagenome or environmental

text: not applicable

text: molecular grade water used as negative control by the subcontracter for library preparation

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: lagoon metagenome

text: not applicable

text: DNA was extracted using a phenol/chloroform method as in (Lacroux et al., 2022)

text: 1 µL

text: molecular grade water 1

text: TAReuk454FWD1-TAReukREV3mod-P3-LGC-Negativkontrolle1


text: IFREMER

text: live

text: Metagenome or environmental

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: lagoon metagenome

text: not applicable

text: 1 µL

text: molecular grade water 2

text: TAReuk454FWD1-TAReukREV3mod-P3-LGC-Negativkontrolle2


text: IFREMER

text: live

text: Metagenome or environmental

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: lagoon metagenome

text: not applicable

text: 1 µL

text: molecular grade water 3

text: TAReuk454FWD1-TAReukREV3mod-P4-LGC-Negativkontrolle3


text: IFREMER

text: live

text: Metagenome or environmental

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: lagoon metagenome

text: not applicable

text: 1 µL

text: molecular grade water 4

text: TAReuk454FWD1-TAReukREV3mod-P4-LGC-Negativkontrolle4


text: IFREMER

text: live

text: Metagenome or environmental

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: not applicable

text: lagoon metagenome

text: not applicable

text: 1 µL

text: molecular grade water 5

text: TAReuk454FWD1-TAReukREV3mod-P5-LGC-Negativkontrolle5


text: IFREMER

text: live

text: Metagenome or environmental

text: Filtration of the 3 µm filtrate from the same sample

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-02-11_0.2 µm filter

text: TAReuk454FWD1-TAReukREV3mod-P02-G08-AB12


text: IFREMER

text: live

text: Metagenome or environmental

text: Filtration of raw water

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-02-11_3 µm filter

text: TAReuk454FWD1-TAReukREV3mod-P02-F08-AB11


text: IFREMER

text: live

text: Metagenome or environmental

text: Centrifugation of raw water with supernatant removed

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Centrifugation

text: 150 mL

text: 2019-02-11_Centrifugation pellet


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-02-26_0.2 µm filter

text: TAReuk454FWD1-TAReukREV3mod-P02-B09-AA10


text: IFREMER

text: live

text: Metagenome or environmental

text: Filtration of raw water

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-02-26_3 µm filter


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Centrifugation

text: 150 mL

text: 2019-02-26_Centrifugation pellet


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-03-27_0.2 µm filter


text: IFREMER

text: live

text: Metagenome or environmental

text: Filtration of raw water

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-03-27_3 µm filter


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Centrifugation

text: 150 mL

text: 2019-03-27_Centrifugation pellet


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-04-08_0.2 µm filter


text: IFREMER

text: live

text: Metagenome or environmental

text: Filtration of raw water

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-04-08_3 µm filter


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Centrifugation

text: 150 mL

text: 2019-04-08_Centrifugation pellet

text: TAReuk454FWD1-TAReukREV3mod-P01-E03-IV-9


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-05-07_0.2 µm filter


text: IFREMER

text: live

text: Metagenome or environmental

text: Filtration of raw water

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-05-07_3 µm filter


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Centrifugation

text: 150 mL

text: 2019-05-07_Centrifugation pellet

text: TAReuk454FWD1-TAReukREV3mod-P01-F04-II-9


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-05-21_0.2 µm filter

text: TAReuk454FWD1-TAReukREV3mod-P02-D10-AB10


text: IFREMER

text: live

text: Metagenome or environmental

text: Filtration of raw water

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-05-21_3 µm filter


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Centrifugation

text: 150 mL

text: 2019-05-21_Centrifugation pellet

text: TAReuk454FWD1-TAReukREV3mod-P01-B05-II-13


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-06-03_0.2 µm filter


text: IFREMER

text: live

text: Metagenome or environmental

text: Filtration of raw water

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-06-03_3 µm filter


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Centrifugation

text: 150 mL

text: 2019-06-03_Centrifugation pellet

text: TAReuk454FWD1-TAReukREV3mod-P01-F05-II-17


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-06-17_0.2 µm filter

text: TAReuk454FWD1-TAReukREV3mod-P02-H10-AB15


text: IFREMER

text: live

text: Metagenome or environmental

text: Filtration of raw water

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: DNA was extracted using a phenol/chloroform method as in (Lacroux et al., 2022)

text: 150 mL

text: 2019-06-17_3 µm filter

text: TAReuk454FWD1-TAReukREV3mod-P02-G10-AB14


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Centrifugation

text: 150 mL

text: 2019-06-17_Centrifugation pellet

text: TAReuk454FWD1-TAReukREV3mod-P01-B06-III-1


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-07-01_0.2 µm filter


text: IFREMER

text: live

text: Metagenome or environmental

text: Filtration of raw water

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-07-01_3 µm filter


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Centrifugation

text: 150 mL

text: 2019-07-01_Centrifugation pellet

text: TAReuk454FWD1-TAReukREV3mod-P01-F06-III-5


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-07-15_0.2 µm filter


text: IFREMER

text: live

text: Metagenome or environmental

text: Filtration of raw water

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-07-15_3 µm filter


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Centrifugation

text: 150 mL

text: 2019-07-15_Centrifugation pellet

text: TAReuk454FWD1-TAReukREV3mod-P01-B07-III-9


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-07-29_0.2 µm filter


text: IFREMER

text: live

text: Metagenome or environmental

text: Filtration of raw water

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-07-29_3 µm filter


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Centrifugation

text: 150 mL

text: 2019-07-29_Centrifugation pellet

text: TAReuk454FWD1-TAReukREV3mod-P01-F07-III-13


text: IFREMER

text: live

text: Metagenome or environmental

text: Filtration of the 3 µm filtrate from the same sample

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-08-12_0.2 µm filter


text: IFREMER

text: live

text: Metagenome or environmental

text: Filtration of raw water

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-08-12_3 µm filter


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Centrifugation

text: 150 mL

text: 2019-08-12_Centrifugation pellet

text: TAReuk454FWD1-TAReukREV3mod-P01-B08-III-17


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-08-26_0.2 µm filter

text: TAReuk454FWD1-TAReukREV3mod-P02-B12-AC10


text: IFREMER

text: live

text: Metagenome or environmental

text: Filtration of raw water

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-08-26_3 µm filter


text: IFREMER

text: live

text: Metagenome or environmental

text: Centrifugation of raw water with supernatant removed

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Centrifugation

text: 150 mL

text: 2019-08-26_Centrifugation pellet


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-09-09_0.2 µm filter

text: TAReuk454FWD1-TAReukREV3mod-P02-D12-AC12


text: IFREMER

text: live

text: Metagenome or environmental

text: Filtration of raw water

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-09-09_3 µm filter

text: TAReuk454FWD1-TAReukREV3mod-P02-C12-AC11


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Centrifugation

text: 150 mL

text: 2019-09-09_Centrifugation pellet


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-09-23_0.2 µm filter

text: TAReuk454FWD1-TAReukREV3mod-P02-F12-AC14


text: IFREMER

text: live

text: Metagenome or environmental

text: Filtration of raw water

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-09-23_3 µm filter

text: TAReuk454FWD1-TAReukREV3mod-P02-E12-AC13


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Centrifugation

text: 150 mL

text: 2019-09-23_Centrifugation pellet


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-10-08_0.2 µm filter


text: IFREMER

text: live

text: Metagenome or environmental

text: Filtration of raw water

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-10-08_3 µm filter


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Centrifugation

text: 150 mL

text: 2019-10-08_Centrifugation pellet

text: TAReuk454FWD1-TAReukREV3mod-P01-B10-AF13


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-10-21_0.2 µm filter


text: IFREMER

text: live

text: Metagenome or environmental

text: Filtration of raw water

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-10-21_3 µm filter


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Centrifugation

text: 150 mL

text: 2019-10-21_Centrifugation pellet


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-11-04_0.2 µm filter


text: IFREMER

text: live

text: Metagenome or environmental

text: Filtration of raw water

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-11-04_3 µm filter


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Centrifugation

text: 150 mL

text: 2019-11-04_Centrifugation pellet


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-11-18_0.2 µm filter


text: IFREMER

text: live

text: Metagenome or environmental

text: Filtration of raw water

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-11-18_3 µm filter


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Centrifugation

text: 150 mL

text: 2019-11-18_Centrifugation pellet

text: TAReuk454FWD1-TAReukREV3mod-P02-A01-AG11


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-12-02_0.2 µm filter

text: TAReuk454FWD1-TAReukREV3mod-P02-H05-AD10


text: IFREMER

text: live

text: Metagenome or environmental

text: Filtration of raw water

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: DNA was extracted using a phenol/chloroform method as in (Lacroux et al., 2022)

text: 150 mL

text: 2019-12-02_3 µm filter


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Centrifugation

text: 150 mL

text: 2019-12-02_Centrifugation pellet


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-12-16_0.2 µm filter

text: TAReuk454FWD1-TAReukREV3mod-P02-B06-AD12


text: IFREMER

text: live

text: Metagenome or environmental

text: Filtration of raw water

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-12-16_3 µm filter

text: TAReuk454FWD1-TAReukREV3mod-P02-A06-AD11


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Centrifugation

text: 150 mL

text: 2019-12-16_Centrifugation pellet


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-12-30_0.2 µm filter

text: TAReuk454FWD1-TAReukREV3mod-P02-D06-AD14


text: IFREMER

text: live

text: Metagenome or environmental

text: Filtration of raw water

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2019-12-30_3 µm filter

text: TAReuk454FWD1-TAReukREV3mod-P02-C06-AD13


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Centrifugation

text: 150 mL

text: 2019-12-30_Centrifugation pellet

text: TAReuk454FWD1-TAReukREV3mod-P02-H02-AH11


text: IFREMER

text: live

text: Metagenome or environmental

text: Filtration of the 3 µm filtrate from the same sample

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2020-01-13_0.2 µm filter

text: TAReuk454FWD1-TAReukREV3mod-P02-F06-AD16


text: IFREMER

text: live

text: Metagenome or environmental

text: Filtration of raw water

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2020-01-13_3 µm filter

text: TAReuk454FWD1-TAReukREV3mod-P02-E06-AD15


text: IFREMER

text: live

text: Metagenome or environmental

text: Centrifugation of raw water with supernatant removed

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Centrifugation

text: 150 mL

text: 2020-01-13_Centrifugation pellet

text: TAReuk454FWD1-TAReukREV3mod-P02-E03-AH16


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2020-01-27_0.2 µm filter

text: TAReuk454FWD1-TAReukREV3mod-P02-H06-AD18


text: IFREMER

text: live

text: Metagenome or environmental

text: Filtration of raw water

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Filtration

text: 150 mL

text: 2020-01-27_3 µm filter

text: TAReuk454FWD1-TAReukREV3mod-P02-G06-AD17


text: IFREMER

text: live

text: Metagenome or environmental

text: France: Thau lagoon, Bouzigues site

text: not applicable

text: Lagoon surface water

text: 43.43429 N 3.66463 E

text: lagoon metagenome

text: Centrifugation

text: 150 mL

text: 2020-01-27_Centrifugation pellet

text: TAReuk454FWD1-TAReukREV3mod-P02-B04-AH21


Alternaria solani wild type

text: Anhui Agricultural University

text: live

text: Microbe, viral or environmental

text: missing

text: wild type

characteristic: genotype

text: China

text: Solanum tuberosum

text: Alternaria solani

text: missing

text: wild type_reps1-3


Alternaria solani CFEM6 deletion mutant

text: Anhui Agricultural University

text: live

text: Microbe, viral or environmental

text: missing

text: China

text: Solanum tuberosum

text: Alternaria solani

characteristic: organism

text: missing


name: Alternaria solani CFEM12 deletion mutant

text: Anhui Agricultural University

text: live

text: Microbe, viral or environmental

text: missing

text: China

text: Solanum tuberosum

text: Alternaria solani

text: missing

characteristic: title


characteristic: External Id

text: FDA CVM NARMS - Tennesse DOH

text: live

characteristic: MLST

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: urine

text: Pseudomonas aeruginosa

text: whole organism

text: not collected

characteristic: strain

text: Microbe sample from Pseudomonas aeruginosa


text: FDA CVM NARMS - Tennesse DOH

characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: sputum

text: Klebsiella pneumoniae

text: whole organism

text: not collected

text: Microbe sample from Klebsiella pneumoniae


text: FDA CVM NARMS - Tennesse DOH

characteristic: INSDC first public

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

characteristic: host

text: wound

text: Enterobacter hormaechei

text: whole organism

text: not collected

text: Microbe sample from Enterobacter hormaechei


text: FDA CVM NARMS - Tennesse DOH

characteristic: INSDC last update

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: Rectal specimen

text: Escherichia coli

text: whole organism

text: not collected

text: Microbe sample from Escherichia coli


text: FDA CVM NARMS - Tennesse DOH

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: Blood Specimen

text: Escherichia coli

text: whole organism

text: not collected

text: Microbe sample from Escherichia coli


text: FDA CVM NARMS - Tennesse DOH

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission model

text: USA

text: Homo sapiens

text: Blood Specimen

text: Klebsiella pneumoniae

text: whole organism

text: not collected


text: FDA CVM NARMS - Tennesse DOH

text: live

text: Microbe, viral or environmental

characteristic: NCBI submission package

text: USA

text: Homo sapiens

text: Other source

text: Klebsiella pneumoniae

text: whole organism

text: not collected


text: FDA CVM NARMS - Tennesse DOH

text: live

text: Microbe, viral or environmental

characteristic: SRA accession

text: USA

text: Homo sapiens

text: urine

text: Klebsiella pneumoniae

text: whole organism

text: not collected


text: FDA CVM NARMS - Tennesse DOH

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: urine

text: Escherichia coli

text: whole organism

text: not collected

text: Microbe sample from Escherichia coli


text: FDA CVM NARMS - Tennesse DOH

text: live

text: Microbe, viral or environmental

text: USA

text: Homo sapiens

text: sputum

text: Pseudomonas aeruginosa

text: whole organism

text: not collected


text: Sir Run Run Shaw Hospital, School of Medicine, Zhejiang University

text: live

text: Model organism or animal

text: foam cell

text: not applicable

text: Mus musculus

text: replicate = biological replicate 1

characteristic: replicate

text: not applicable

characteristic: sex

text: not applicable

text: not applicable

characteristic: tissue

text: Model organism or animal sample from Mus musculus

text: saline

characteristic: treatment


text: live

text: Model organism or animal

text: foam cell

text: not applicable

text: Mus musculus

characteristic: organism

text: replicate = biological replicate 2

text: not applicable

text: not applicable

text: not applicable

characteristic: title

text: saline


characteristic: External Id

text: live

text: Model organism or animal

text: foam cell

text: not applicable

text: Mus musculus

text: replicate = biological replicate 3

text: not applicable

text: not applicable

text: not applicable

text: saline


text: live

text: Model organism or animal

text: foam cell

text: not applicable

text: Mus musculus

text: replicate = biological replicate 4

text: not applicable

text: not applicable

characteristic: strain

text: not applicable

text: saline


characteristic: INSDC center name

text: live

text: Model organism or animal

text: foam cell

text: not applicable

text: Mus musculus

text: replicate = biological replicate 5

text: not applicable

text: not applicable

text: not applicable

text: nanoparticles


characteristic: INSDC secondary accession

text: live

text: Model organism or animal

text: foam cell

text: not applicable

text: Mus musculus

text: replicate = biological replicate 6

text: not applicable

text: not applicable

text: not applicable

text: nanoparticles


characteristic: INSDC first public

text: live

text: Model organism or animal

text: foam cell

text: not applicable

text: Mus musculus

text: replicate = biological replicate 7

text: not applicable

text: not applicable

text: not applicable

text: nanoparticles


text: live

text: Model organism or animal

text: foam cell

text: not applicable

text: Mus musculus

text: replicate = biological replicate 8

text: not applicable

text: not applicable

text: not applicable

text: nanoparticles


Cat nasal swabs

text: Huazhong Agricultural University

text: live

text: Metagenome or environmental

text: China

text: Cat

characteristic: host

text: upper respiratory tract metagenome

text: Metagenome or environmental sample from Not collected


text: Zhejiang University

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: China:Hangzhou

text: broiler

text: 30 N 120 E

text: chicken gut metagenome

text: Metagenome or environmental sample from chicken gut metagenome


characteristic: ID

text: Dartmouth College

text: live

characteristic: INSDC status

text: MiPro

characteristic: Medium

text: Metagenome or environmental

characteristic: Replicate

text: USA:NH

text: Homo sapiens

text: stool

text: 43.708288 N 72.287142 W

text: gut metagenome


text: Dartmouth College

text: live

text: lowCF

text: Metagenome or environmental

characteristic: NCBI submission model

characteristic: NCBI submission package

characteristic: SRA accession

text: USA:NH

text: Homo sapiens

text: stool

text: 43.708288 N 72.287142 W

text: gut metagenome


text: Dartmouth College

text: live

text: medCF

text: Metagenome or environmental

text: USA:NH

text: Homo sapiens

text: stool

text: 43.708288 N 72.287142 W

text: gut metagenome


text: Jef Boeke, Institute for Systems Genetics, NYU Langone Health

text: live

text: Generic

text: missing

text: his3{delta}1 leu2{delta}0 ura3{delta}0

characteristic: genotype

text: missing

text: a

characteristic: mating type

text: Saccharomyces cerevisiae


text: live

text: Generic

text: missing

text: his3{delta}1 leu2{delta}0 ura3{delta}0 URA3

text: missing

text: a

text: Saccharomyces cerevisiae

characteristic: organism

characteristic: title


characteristic: External Id

text: live

text: Generic

text: missing

text: his3{delta}1 leu2{delta}0 ura3{delta}0 LEU2

text: missing

text: a

text: Saccharomyces cerevisiae

characteristic: strain


characteristic: INSDC center name

characteristic: INSDC secondary accession

text: live

text: Generic

text: missing

text: his3{delta}1 leu2{delta}0 met15{delta}0 ura3{delta}0

text: missing

text: a

text: Saccharomyces cerevisiae


characteristic: INSDC first public

text: live

text: Generic

text: missing

text: is3{delta}1 leu2{delta}0 ura3{delta}0

text: missing

text: a

text: Saccharomyces cerevisiae


characteristic: INSDC last update

text: live

text: Generic

text: missing

text: his3{delta}1 leu2{delta}0 ura3{delta}0 YKL162C-A::ZEV-NatMX4, pWZ758, pWZ759

text: missing

text: a

text: Saccharomyces cerevisiae


text: live

text: Generic

text: missing

text: his3{delta}1 leu2{delta}0 ura3{delta}0 YKL162C-A::ZEV-NatMX4, pWZ802, pWZ803

text: missing

text: a

text: Saccharomyces cerevisiae


text: live

text: Generic

text: missing

text: his3{delta}1 leu2{delta}0 met15{delta}0 ura3{delta}0 YKL162C-A::ZEV-NatMX4, pWZ758, pWZ759

text: missing

text: a

text: Saccharomyces cerevisiae


text: live

text: Generic

text: missing

text: his3{delta}1 leu2{delta}0 met15{delta}0 ura3{delta}0 YKL162C-A::ZEV-NatMX4, pWZ802, pWZ803

text: missing

text: a

text: Saccharomyces cerevisiae


text: Oregon State University

text: live

text: SARS-CoV-2: wastewater surveillance

text: Oregon State University/Oregon Health Authority

text: USA: Oregon

text: wastewater

text: wastewater metagenome

text: public health surveillance community-level

text: Oregon State University

text: SARS-CoV-2: wastewater surveillance sample from wastewater metagenome

text: raw wastewater

text: wastewater treatment plant

text: composite

text: copies/L

text: N gene (orf9)

text: yes

text: Not Provided: ddPCR detection of SARS-CoV-2 using the BioRad nCoV assay on the BioRad QXTwo


text: The Second Affiliated Hospital of Nanjing Medical University

text: live

text: Human

text: not applicable

characteristic: age

text: Nanjing

text: not applicable

text: China:Nanjing

characteristic: isolate

text: Homo sapiens

text: biological relicate1

characteristic: replicate

text: not applicable

characteristic: sex

text: Cell

characteristic: tissue

text: Human sample from Homo sapiens


text: live

characteristic: INSDC status

text: Human

characteristic: NCBI submission model

characteristic: NCBI submission package

text: not applicable

text: Nanjing

text: not applicable

text: China:Nanjing

text: Homo sapiens

text: biological relicate2

text: not applicable

text: Cell

text: Human sample from Homo sapiens


text: Yunnan Agricultural University

text: live

text: Model organism or animal

characteristic: SRA accession

text: 1 year

text: Shelduck

characteristic: breed

text: adult

text: China:Jianshui

text: health

text: Anas platyrhynchos

text: female

text: blood

text: Model organism or animal sample from Anas platyrhynchos


text: Yunnan Agricultural University

text: live

text: Model organism or animal

text: 1 year

text: Shelduck

text: adult

text: China:Jianshui

text: health

text: Anas platyrhynchos

characteristic: organism

text: male

text: blood

characteristic: title


characteristic: External Id

text: Research Center for Endocrine and Metabolic Diseases, Laboratory of Endocrinology and Immune System

text: live

text: Generic

text: Mononuclear cell

characteristic: cell type

text: missing

text: HFrD

characteristic: diet

text: missing

text: Mus musculus

text: Liver

characteristic: strain

text: Liver

text: HFrD_DW , replicate 2, scRNAseq


characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

characteristic: INSDC secondary accession

text: live

text: Generic

text: Mononuclear cell

text: missing

text: NCD

text: missing

text: Mus musculus

text: Liver

text: Liver

text: NCD_DW , replicate 1, scRNAseq


Curtobacterium sp.

text: MENDELU

text: live

text: MIGS.ba

text: Curtobacterium sp. that was found as contaminant of tissue cultures for the industrial propagation of rootstocks GF677

characteristic: description

text: Czech Republic: Moravia

text: Prunus

characteristic: host

text: plantlet

text: 48.7935381 N 16.7993067 E

text: Curtobacterium sp. A7_M15

text: MIGS Cultured Bacterial/Archaeal sample from Curtobcterium


text: CSIRO Applied Genomics Initiative

text: live

characteristic: INSDC status

text: Model organism or animal

text: adult

text: Yass

characteristic: ecotype

text: Australia: NSW, Yass

characteristic: isolate

text: Musca vetustissima

text: pooled male and female

characteristic: sex

text: whole insect

characteristic: tissue

text: Model organism or animal sample from Musca vetustissima


text: CSIRO Applied Genomics Initiative

text: live

text: Model organism or animal

characteristic: NCBI submission model

characteristic: NCBI submission package

text: AIMS

text: polyp

text: Davies reef

text: Australia: Queensland, Davis

text: Stylophora pistillata

characteristic: organism

text: not applicable

text: polyp

text: Model organism or animal sample from Stylophora pistillata


Neckar Dhc DCA

characteristic: External Id

text: Institute of Applied Ecology, Chinese Academy of Sciences

text: live

text: MIMAG.sediment

characteristic: SRA accession

text: 5 m

characteristic: depth

text: Keywords: GSC:MIxS;MIMAG:6.0

text: 240 m

characteristic: elev

text: river sediment

text: river sediment

text: river sediment

characteristic: environmental-sample

text: Germany: Stuttgart

text: Dhc DCA

text: river sediment; 1,2-DCA enrichment culture

text: 48.77 N 9.17 E

text: freshwater sediment metagenome

characteristic: metagenome-source

characteristic: metagenomic

text: Dehalococcoides mccartyi

text: metagenomic assembly

characteristic: sample-type

text: MIMAG Metagenome-assembled Genome sample from Dehalococcoides mccartyi

characteristic: title


name: Isolated Stenotrophomonas geniculata SPARC6 from Human source in Pakistan

text: PARC-National Agricultural Research Center

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

characteristic: INSDC status

text: Microbe, viral or environmental

text: Pakistan

text: Homo sapiens

characteristic: host

text: blood

text: Stenotrophomonas geniculata

text: blood

characteristic: strain

text: Microbe sample from Stenotrophomonas geniculata


text: Augusta University

characteristic: INSDC secondary accession

text: live

text: Generic

characteristic: NCBI submission model

characteristic: NCBI submission package

text: missing

text: missing

text: Mus musculus

text: kidney

text: kidney

characteristic: tissue

text: Cis9w, RLDC-1

text: RLDC for 9 weeks

characteristic: treatment


characteristic: External Id

text: Augusta University

text: live

text: Generic

characteristic: SRA accession

text: missing

text: missing

text: Mus musculus

characteristic: organism

text: kidney

text: kidney

text: CT9w, Control-1

text: Untreated


text: Augusta University

text: live

text: Generic

text: missing

text: missing

text: Mus musculus

text: kidney

text: kidney

text: Cis9w, RLDC-2

text: RLDC for 9 weeks


text: Augusta University

text: live

text: Generic

text: missing

text: missing

text: Mus musculus

text: kidney

text: kidney

text: CT9w, Control-2

text: Untreated


text: South China Agricultural University

text: live

text: Plant

text: two weeks

characteristic: age

characteristic: cultivar

text: not collected

text: japonica

characteristic: ecotype

text: China:Guangzhou

text: GST

characteristic: isolate

text: Oryza sativa

text: biological replicate 1

characteristic: replicate

text: Leaf

text: Plant sample from Oryza sativa


text: South China Agricultural University

characteristic: INSDC center name

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Plant

text: two weeks

text: not collected

text: japonica

text: China:Guangzhou

text: GST

text: Oryza sativa

text: biological replicate 2

text: Leaf

text: Plant sample from Oryza sativa

characteristic: title


text: South China Agricultural University

characteristic: INSDC secondary accession

text: live

characteristic: INSDC status

text: Plant

text: two weeks

text: not collected

text: japonica

text: China:Guangzhou

text: Oryza sativa

text: biological replicate 1

text: Leaf

text: Plant sample from Oryza sativa


text: South China Agricultural University

text: live

text: Plant

characteristic: NCBI submission model

characteristic: NCBI submission package

text: two weeks

text: not collected

text: japonica

text: China:Guangzhou

text: Oryza sativa

text: biological replicate 2

text: Leaf

text: Plant sample from Oryza sativa


text: South China Agricultural University

text: live

text: Plant

text: not collected

text: TFB

text: indica

text: China:Guangzhou

text: TFB

text: Oryza sativa

text: biological replicate 1

text: Lodicule

characteristic: tissue

text: Plant sample from Oryza sativa


characteristic: External Id

text: South China Agricultural University

text: live

text: Plant

text: not collected

text: TFB

text: indica

text: China:Guangzhou

text: TFB

text: Oryza sativa

text: biological replicate 2

text: Lodicule

text: Plant sample from Oryza sativa


text: South China Agricultural University

text: live

text: Plant

characteristic: SRA accession

text: not collected

text: TFB

text: indica

text: China:Guangzhou

text: TFB

text: Oryza sativa

text: biological replicate 3

text: Lodicule

text: Plant sample from Oryza sativa


text: South China Agricultural University

text: live

text: Plant

text: not collected

text: japonica

text: China:Guangzhou

text: Oryza sativa

characteristic: organism

text: biological replicate 1

text: Lodicule

text: Plant sample from Oryza sativa


text: South China Agricultural University

text: live

text: Plant

text: not collected

characteristic: age

text: japonica

text: China:Guangzhou

text: Oryza sativa

text: biological replicate 2

text: Lodicule

text: Plant sample from Oryza sativa


text: South China Agricultural University

text: live

text: Plant

text: not collected

characteristic: cultivar

text: japonica

text: China:Guangzhou

text: Oryza sativa

text: biological replicate 3

text: Lodicule

text: Plant sample from Oryza sativa


text: South China Agricultural University

text: live

text: Plant

text: not collected

text: indica

characteristic: ecotype

text: China:Guangzhou

text: Oryza sativa

text: biological replicate 1

text: Lodicule

text: Plant sample from Oryza sativa


text: South China Agricultural University

text: live

text: Plant

text: not collected

text: indica

text: China:Guangzhou

characteristic: isolate

text: Oryza sativa

text: biological replicate 2

text: Lodicule

text: Plant sample from Oryza sativa


text: South China Agricultural University

text: live

text: Plant

text: not collected

text: indica

text: China:Guangzhou

text: Oryza sativa

text: biological replicate 3

characteristic: replicate

text: Lodicule

text: Plant sample from Oryza sativa


text: South China Agricultural University

characteristic: INSDC center name

text: live

text: Metagenome or environmental

characteristic: description

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: PA_biological replicate 1

text: Metagenome or environmental sample from wastewater metagenome


text: South China Agricultural University

characteristic: INSDC first public

characteristic: INSDC last update

text: live

text: Metagenome or environmental

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: PA_biological replicate 2


text: South China Agricultural University

characteristic: INSDC secondary accession

text: live

text: Metagenome or environmental

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: PA_biological replicate 3

characteristic: title


text: South China Agricultural University

text: live

characteristic: INSDC status

text: Metagenome or environmental

characteristic: NCBI submission model

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: PA_biological replicate 4


text: South China Agricultural University

text: live

text: Metagenome or environmental

characteristic: NCBI submission package

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: PA_biological replicate 5


characteristic: External Id

text: South China Agricultural University

text: live

text: Metagenome or environmental

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: PA_biological replicate 6


text: South China Agricultural University

text: live

text: Metagenome or environmental

characteristic: SRA accession

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: PO_biological replicate 1


text: South China Agricultural University

text: live

text: Metagenome or environmental

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

characteristic: organism

text: PO_biological replicate 2


text: South China Agricultural University

text: live

text: Metagenome or environmental

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: PO_biological replicate 3


text: South China Agricultural University

text: live

text: Metagenome or environmental

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: PO_biological replicate 4


text: South China Agricultural University

text: live

text: Metagenome or environmental

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: PO_biological replicate 5


text: South China Agricultural University

text: live

text: Metagenome or environmental

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: PO_biological replicate 6


text: South China Agricultural University

text: live

text: Metagenome or environmental

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: TA_biological replicate 1


text: South China Agricultural University

text: live

text: Metagenome or environmental

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: TA_biological replicate 2


text: South China Agricultural University

text: live

text: Metagenome or environmental

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: TA_biological replicate 3


text: South China Agricultural University

text: live

text: Metagenome or environmental

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: TA_biological replicate 4


text: South China Agricultural University

text: live

text: Metagenome or environmental

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: TA_biological replicate 5


text: South China Agricultural University

text: live

text: Metagenome or environmental

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: TA_biological replicate 6


text: South China Agricultural University

text: live

text: Metagenome or environmental

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: TO_biological replicate 1


text: South China Agricultural University

text: live

text: Metagenome or environmental

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: TO_biological replicate 2


text: South China Agricultural University

text: live

text: Metagenome or environmental

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: TO_biological replicate 3


text: South China Agricultural University

text: live

text: Metagenome or environmental

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: TO_biological replicate 4


text: South China Agricultural University

text: live

text: Metagenome or environmental

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: TO_biological replicate 5


text: South China Agricultural University

text: live

text: Metagenome or environmental

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: TO_biological replicate 6


text: South China Agricultural University

text: live

text: Metagenome or environmental

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: TrPA_biological replicate 1


text: South China Agricultural University

text: live

text: Metagenome or environmental

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: TrPA_biological replicate 2


text: South China Agricultural University

text: live

text: Metagenome or environmental

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: TrPA_biological replicate 3


text: South China Agricultural University

text: live

text: Metagenome or environmental

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: TrPA_biological replicate 4


text: South China Agricultural University

text: live

text: Metagenome or environmental

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: TrPA_biological replicate 5


text: South China Agricultural University

text: live

text: Metagenome or environmental

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: TrPA_biological replicate 6


text: South China Agricultural University

text: live

text: Metagenome or environmental

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: TrPO_biological replicate 1


text: South China Agricultural University

text: live

text: Metagenome or environmental

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: TrPO_biological replicate 2


text: South China Agricultural University

text: live

text: Metagenome or environmental

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: TrPO_biological replicate 3


text: South China Agricultural University

text: live

text: Metagenome or environmental

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: TrPO_biological replicate 4


text: South China Agricultural University

text: live

text: Metagenome or environmental

text: China: Xinxing

text: A/O wastewater treatment process

text: 22.701 N 112.19 E

text: wastewater metagenome

text: TrPO_biological replicate 5